BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026738
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224107513|ref|XP_002314507.1| predicted protein [Populus trichocarpa]
gi|222863547|gb|EEF00678.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
VP +LMGGE QARE+V+P D K+NG +D Y+FPE+RLQQ ESENILE++ E+ NGSL+
Sbjct: 148 VPTYLMGGETQAREFVAPADAKENGPVDSYTFPEKRLQQASESENILEENSVEKPNGSLK 207
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
N + AQD PASVEEP EPQKHTYASILRVAKGQS SVTPQPSV+KN++P S+WNH
Sbjct: 208 NTASNAQDRQPASVEEPAREPQKHTYASILRVAKGQSATSVTPQPSVNKNVTPASEWNHT 267
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
Q QQ TV S ++E+ A+T EEI E+EI+SVYVRNL P++SE+EI EEFK FG
Sbjct: 268 SQAPVQQSTVMSDSFERPEAETAEEIH----EDEIRSVYVRNLLPTLSEAEIEEEFKNFG 323
Query: 193 ELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
E+ +GVVIRSRKDVG+CYAFVEFEDM GV NAV+
Sbjct: 324 EIVPDGVVIRSRKDVGVCYAFVEFEDMAGVHNAVKA 359
>gi|255574885|ref|XP_002528349.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
gi|223532217|gb|EEF34021.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
Length = 472
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 174/216 (80%), Gaps = 2/216 (0%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGL-IDDYSFPEQRLQQVPESENILEDSPAEELNGSL 71
V N+L+GGE QARE+V+P D K+NGL +D+Y+F EQ+L Q PESEN+ E++ + E NG L
Sbjct: 161 VANYLLGGEFQAREFVAPADAKENGLPVDNYTFQEQQLHQAPESENVREEN-SIEANGPL 219
Query: 72 QNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH 131
Q ++AQD L ASV+EP+GEPQKHTYASILRVAKGQS PSV QPS++KN P SDWNH
Sbjct: 220 QKTGSSAQDQLLASVDEPIGEPQKHTYASILRVAKGQSAPSVASQPSLNKNSPPTSDWNH 279
Query: 132 VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKF 191
QP +Q ETV++ ++E+ ADT EE S EDE+E+KSVYVRNLP ++SE+EIAEEFK F
Sbjct: 280 ASQPISQTETVTANSFERFGADTVEENSTAEDEDEVKSVYVRNLPTTISEAEIAEEFKNF 339
Query: 192 GELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
G + +GVVIRSRKDVG+CYAFVEFEDMT V NAV+
Sbjct: 340 GSIVPDGVVIRSRKDVGVCYAFVEFEDMTAVHNAVK 375
>gi|296083732|emb|CBI23721.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 175/220 (79%), Gaps = 1/220 (0%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V N+++GGEIQARE+V+PV+ +NG +D Y FPEQRLQQV E++NI ED+ E+ NGSLQ
Sbjct: 161 VSNYMLGGEIQAREFVAPVNAMENGPVDRYGFPEQRLQQVTETDNIPEDNSGEDSNGSLQ 220
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
N +N QD PA V+EPVGEPQKHTYASILRVAKGQS PSV+PQ +K++ P S+W+H+
Sbjct: 221 NVMNTLQDLPPAPVDEPVGEPQKHTYASILRVAKGQSVPSVSPQSYNNKSMPPASEWHHM 280
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
PQP+ +Q SS +EK ++ EE+S VEDE EIKSVYVRNLP +VS SEIA+EFK FG
Sbjct: 281 PQPSNEQSVASSVMFEKPASEVAEEVSGVEDEGEIKSVYVRNLPSTVSASEIAKEFKNFG 340
Query: 193 ELSSEGVVIRSRKD-VGICYAFVEFEDMTGVRNAVEVCIL 231
L +GVVIR+RKD +G+CYAFVE+ED++GV+NA++ +
Sbjct: 341 RLKPDGVVIRNRKDNIGVCYAFVEYEDISGVQNAIKASTI 380
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 175/220 (79%), Gaps = 1/220 (0%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V N+++GGEIQARE+V+PV+ +NG +D Y FPEQRLQQV E++NI ED+ E+ NGSLQ
Sbjct: 422 VSNYMLGGEIQAREFVAPVNAMENGPVDRYGFPEQRLQQVTETDNIPEDNSGEDSNGSLQ 481
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
N +N QD PA V+EPVGEPQKHTYASILRVAKGQS PSV+PQ +K++ P S+W+H+
Sbjct: 482 NVMNTLQDLPPAPVDEPVGEPQKHTYASILRVAKGQSVPSVSPQSYNNKSMPPASEWHHM 541
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
PQP+ +Q SS +EK ++ EE+S VEDE EIKSVYVRNLP +VS SEIA+EFK FG
Sbjct: 542 PQPSNEQSVASSVMFEKPASEVAEEVSGVEDEGEIKSVYVRNLPSTVSASEIAKEFKNFG 601
Query: 193 ELSSEGVVIRSRKD-VGICYAFVEFEDMTGVRNAVEVCIL 231
L +GVVIR+RKD +G+CYAFVE+ED++GV+NA++ +
Sbjct: 602 RLKPDGVVIRNRKDNIGVCYAFVEYEDISGVQNAIKASTI 641
>gi|147859669|emb|CAN83110.1| hypothetical protein VITISV_026572 [Vitis vinifera]
Length = 518
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 175/220 (79%), Gaps = 1/220 (0%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V N+++GGEIQARE+V+PV+ +NG +D YSFPEQRLQQV E+E I ED+ E+ NGSLQ
Sbjct: 145 VSNYMLGGEIQAREFVAPVNAMENGPVDRYSFPEQRLQQVTETEIIPEDNSGEDSNGSLQ 204
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
N +N QD PA V+EPVGEPQKHTYASILRVAKGQS PSV+PQ +K++ P S+W+H+
Sbjct: 205 NVMNTLQDLPPAPVDEPVGEPQKHTYASILRVAKGQSVPSVSPQLYNNKSMPPASEWHHM 264
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
PQP+ +Q SS +EK ++ EE+S VEDE EIKSVYVRNLP +VS SEIA+EFK FG
Sbjct: 265 PQPSNEQSVASSVMFEKPASEVAEEVSGVEDEGEIKSVYVRNLPSTVSASEIAKEFKNFG 324
Query: 193 ELSSEGVVIRSRKD-VGICYAFVEFEDMTGVRNAVEVCIL 231
+ +GVVIR+RKD +G+CYAFVE+ED++GV+NA++ +
Sbjct: 325 RVKPDGVVIRNRKDNIGVCYAFVEYEDISGVQNAIKASTV 364
>gi|356575200|ref|XP_003555730.1| PREDICTED: uncharacterized protein LOC100817177 [Glycine max]
Length = 472
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 173/218 (79%), Gaps = 5/218 (2%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V N+L+GG+IQAR+YV+ +VK+NG++D+Y F EQR+Q+ P++E+I ED+ EE NGSLQ
Sbjct: 161 VSNYLLGGDIQARDYVATNEVKENGVVDNYGFSEQRMQRAPDTEHIREDNTVEESNGSLQ 220
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
++VNA QD++P S +EP GEPQKHTYASILRVAKG STP V QPS KN+SP S+W+H
Sbjct: 221 SSVNAVQDHVPVSPDEPAGEPQKHTYASILRVAKGLSTP-VASQPS-HKNVSP-SEWDHA 277
Query: 133 PQPTTQQE--TVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKK 190
P ++QQ+ S+ A+E+S D EE A EDE+EIKSVYVRNL P+VS SEI +EFK
Sbjct: 278 PHSSSQQQQTIASANAFERSETDAVEEFPATEDEDEIKSVYVRNLSPAVSPSEIEDEFKN 337
Query: 191 FGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
FG + +GVV+RSRKDVG+CYAFVEFEDMTGV NAV+
Sbjct: 338 FGRIRPDGVVVRSRKDVGVCYAFVEFEDMTGVHNAVKA 375
>gi|363807448|ref|NP_001242133.1| uncharacterized protein LOC100795457 [Glycine max]
gi|255640125|gb|ACU20353.1| unknown [Glycine max]
Length = 471
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V N+L+G +IQAR+YV+ +VK+NG++D+Y F EQR+Q+ P+SE+I ED+ EE NGSLQ
Sbjct: 161 VSNYLLGRDIQARDYVATNEVKENGVVDNYGFSEQRMQRAPDSEHIREDNAVEESNGSLQ 220
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
++VNA QD+ PAS +EP GEPQKHTYASILRVAKGQSTPSV Q KN+SP S+W+H
Sbjct: 221 SSVNAVQDHAPASPDEPAGEPQKHTYASILRVAKGQSTPSVASQ---HKNVSP-SEWDHA 276
Query: 133 PQPTTQQE--TVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKK 190
PQ ++QQ+ T S+ A+E+S D EE A EDE+EIKSVYVRNL P+VS SEI +EFK
Sbjct: 277 PQSSSQQQQMTASANAFERSETDAAEEFPATEDEDEIKSVYVRNLSPTVSPSEIEDEFKN 336
Query: 191 FGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
FG + +GVVIRSRKDVG+CYAFVEFEDMTGV NAV+
Sbjct: 337 FGRIRPDGVVIRSRKDVGVCYAFVEFEDMTGVYNAVKA 374
>gi|356576442|ref|XP_003556340.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 468
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQ 72
V NHL+GG+I AR++V+ +VK+NG +++Y F Q++ +V +SE+I ED AEE +GS Q
Sbjct: 161 VSNHLLGGDIHARDFVATNEVKENGAVNNYGFSHQQMLRVHDSEHIQEDVVAEESHGSFQ 220
Query: 73 NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
V+A Q+++P++ E P EPQKHTYASILRVAKGQ+TPSV QPS KN++ + DW+H
Sbjct: 221 PTVDAVQEHVPSAEESPE-EPQKHTYASILRVAKGQATPSVASQPS-QKNLTSL-DWDHA 277
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
P +QQ T ++E+S EE EDE+EIKSVYVRNL P+VS SEI EEFK FG
Sbjct: 278 PLTNSQQTT----SFERSETVVVEEAPTTEDEDEIKSVYVRNLSPTVSASEIEEEFKNFG 333
Query: 193 ELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+ +GVVIRSRKDVG+CYAFVEFEDM GV NAV+
Sbjct: 334 RIQPDGVVIRSRKDVGVCYAFVEFEDMMGVHNAVK 368
>gi|449432500|ref|XP_004134037.1| PREDICTED: putative G3BP-like protein-like [Cucumis sativus]
gi|449487478|ref|XP_004157646.1| PREDICTED: putative G3BP-like protein-like [Cucumis sativus]
Length = 473
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 5/218 (2%)
Query: 12 TVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSL 71
TV N+ + G +Q RE+ PV VK+NG ID++ F EQ++QQVPE++NI+E++ AE +N
Sbjct: 160 TVSNYSLNGAVQVREFAPPV-VKENGHIDNHKFVEQQVQQVPEAKNIIEENTAE-VNSMH 217
Query: 72 QNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS--VTPQPSVSKNISPVSDW 129
NA +QD+ P SVEE EPQKHTYASILRV KGQ PS PQ VSK P S+
Sbjct: 218 HNASAISQDHFPVSVEEHAEEPQKHTYASILRVVKGQDVPSPVAAPQYPVSKGTPPASEQ 277
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
N+ P PT+QQ S+ TG E +++DE EIKSVYVRNLP +VS SE+ EEFK
Sbjct: 278 NYTPPPTSQQ-VPSASQNNSEMEQTGGEFPSIDDEGEIKSVYVRNLPSTVSASEVEEEFK 336
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
FG+LSS+GVVIRSRKDVG CYAFVEFED+TGV+NAV+
Sbjct: 337 HFGKLSSDGVVIRSRKDVGFCYAFVEFEDITGVQNAVK 374
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 5/218 (2%)
Query: 12 TVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSL 71
TV N+ + G +Q RE+ PV VK+NG ID++ F EQ++QQVPE++NI+E++ AE +N
Sbjct: 244 TVSNYSLNGAVQVREFAPPV-VKENGHIDNHKFVEQQVQQVPEAKNIIEENTAE-VNSMH 301
Query: 72 QNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS--VTPQPSVSKNISPVSDW 129
NA +QD+ P SVEE EPQKHTYASILRV KGQ PS PQ VSK P S+
Sbjct: 302 HNASAISQDHFPVSVEEHAEEPQKHTYASILRVVKGQDVPSPVAAPQYPVSKGTPPASEQ 361
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
N+ P PT+QQ S+ TG E +++DE EIKSVYVRNLP +VS SE+ EEFK
Sbjct: 362 NYTPPPTSQQ-VPSASQNNSEMEQTGGEFPSIDDEGEIKSVYVRNLPSTVSASEVEEEFK 420
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
FG+LSS+GVVIRSRKDVG CYAFVEFED+TGV+NAV+
Sbjct: 421 HFGKLSSDGVVIRSRKDVGFCYAFVEFEDITGVQNAVK 458
>gi|357439835|ref|XP_003590195.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
gi|355479243|gb|AES60446.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
Length = 416
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 147/195 (75%), Gaps = 3/195 (1%)
Query: 11 LTVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGS 70
+ V N++ G+IQAR +VK+NG+ D+Y + EQR+Q+ P+SE+I ED+ AE+ NGS
Sbjct: 160 MPVSNYMPSGDIQARIVGRTNEVKENGVADNYGYSEQRIQRGPDSEHIREDNAAEDSNGS 219
Query: 71 LQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWN 130
L ++ NA QD+LPAS EEP GEPQKHTYASILRVAKGQSTP V QPS KN+SP S+W+
Sbjct: 220 LHSSGNAVQDHLPASPEEPAGEPQKHTYASILRVAKGQSTP-VASQPS-HKNVSP-SEWD 276
Query: 131 HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKK 190
++P + QQ T S+ A+E+S D EE+ A E E+EIKSVYVRNL P+VS SEI EEFK
Sbjct: 277 YIPPSSNQQSTASANAFERSEPDAVEELPAAEYEDEIKSVYVRNLTPTVSPSEIEEEFKN 336
Query: 191 FGELSSEGVVIRSRK 205
FG + +GVVIRSR+
Sbjct: 337 FGRIRPDGVVIRSRR 351
>gi|388492940|gb|AFK34536.1| unknown [Lotus japonicus]
Length = 274
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 134/180 (74%), Gaps = 2/180 (1%)
Query: 49 LQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQ 108
+Q+ P+SE+I ED+ EE G LQ++ N QD+ PAS EE GEPQKH YASILRVAKGQ
Sbjct: 1 MQRGPDSEHIREDNAVEESIGLLQSSGNPVQDHAPASPEESAGEPQKHAYASILRVAKGQ 60
Query: 109 STPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIK 168
STPS QPS S S+W+ PQ ++QQ T S+ A+E+S + EE+ A EDE+EIK
Sbjct: 61 STPSAASQPSHKHASS--SEWDPAPQSSSQQTTASANAFERSETEGVEELPATEDEDEIK 118
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
SVYVRNL P+VS SE+ EEFK FG + +GVVIRSRKDVG+CYAFVEFEDM+GV NAV+
Sbjct: 119 SVYVRNLSPTVSPSEVEEEFKNFGRIRPDGVVIRSRKDVGVCYAFVEFEDMSGVHNAVQA 178
>gi|449445814|ref|XP_004140667.1| PREDICTED: putative G3BP-like protein-like [Cucumis sativus]
Length = 484
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 146/205 (71%), Gaps = 3/205 (1%)
Query: 24 AREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLP 83
AREYV V ++ + +D YS PEQ+ Q+ ESE ++E++P E+L S QN VN+ Q+ LP
Sbjct: 171 AREYVDSVHIEDDP-VDKYSLPEQQQQEEFESEVVVEEAPVEDLVASHQNVVNSVQEPLP 229
Query: 84 ASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ-ETV 142
A ++EP+GEP+K TYASILR A+ ++ S PQPS + S SDWNH+P+P Q
Sbjct: 230 AVIDEPIGEPEKKTYASILRAARAEAAQSAIPQPSFYPSASATSDWNHIPEPAPQHVNPA 289
Query: 143 SSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR 202
SYA E DT EE VEDE E KSVYVRNLPPSV+E+EI +EFK FG + +GV IR
Sbjct: 290 PSYAPEPG-PDTIEEGFGVEDEGEPKSVYVRNLPPSVTEAEIEQEFKDFGRILPDGVFIR 348
Query: 203 SRKDVGICYAFVEFEDMTGVRNAVE 227
SRK++G+CYAFVEFED+ GV+NA++
Sbjct: 349 SRKEIGVCYAFVEFEDILGVQNALK 373
>gi|449487351|ref|XP_004157583.1| PREDICTED: putative G3BP-like protein-like [Cucumis sativus]
Length = 449
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 80
E AREYV V ++ + +D YS PEQ+ Q+ ESE ++E++P E+L S QN VN+ Q+
Sbjct: 168 EENAREYVDSVHIEDDP-VDKYSLPEQQQQEEFESEVVVEEAPVEDLVASHQNVVNSVQE 226
Query: 81 YLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ- 139
LPA ++EP+GEP+K TYASILR A+ ++ S PQPS + S SDWNH+P+P Q
Sbjct: 227 PLPAVIDEPIGEPEKKTYASILRAARAEAAQSAIPQPSFYPSASATSDWNHIPEPAPQHV 286
Query: 140 ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV 199
SYA E DT EE VEDE E KSVYVRNLPPSV+E+EI +EFK FG + +GV
Sbjct: 287 NPAPSYAPEPG-PDTIEEGFGVEDEGEPKSVYVRNLPPSVTEAEIEQEFKDFGRILPDGV 345
Query: 200 VIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
IRSRK++G+CYAFVEFED+ GV+NA++
Sbjct: 346 FIRSRKEIGVCYAFVEFEDILGVQNALKAS 375
>gi|255571190|ref|XP_002526545.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
gi|223534106|gb|EEF35823.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
Length = 465
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 10/213 (4%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 80
E +AREYV+ V ++ + +D YS PEQ+ QQ E+E ++E++P EE S Q AV QD
Sbjct: 182 EEEAREYVNSVHIEDDP-VDKYSLPEQQQQQDFETEIVVEEAPVEETPASFQGAVTIVQD 240
Query: 81 YLP--ASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQ 138
P A++EEP E K T+ASILRV+KG S SV QP V+K+ SDWNH+ + T+Q
Sbjct: 241 PTPTAAALEEPTEEAPKKTWASILRVSKGPS--SVVTQPPVNKSPPATSDWNHIQESTSQ 298
Query: 139 Q-ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSE 197
Q ++ SY E + +T + + DE E KSVYVRNLP ++ +EI EEF+ FG + +
Sbjct: 299 QPDSGLSYVPESGF-ETTDNLGV--DEGEPKSVYVRNLPSDITAAEIEEEFRNFGRIKPD 355
Query: 198 GVVIRSRKDV-GICYAFVEFEDMTGVRNAVEVC 229
GV IR+RKDV G+CYAFVEFED+T V+NA++
Sbjct: 356 GVFIRNRKDVIGVCYAFVEFEDLTSVQNAIQAS 388
>gi|427199308|gb|AFY26884.1| ras GTPase-activating protein-binding protein 1 [Morella rubra]
Length = 449
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 144/212 (67%), Gaps = 3/212 (1%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 80
E +A++YV+ + ++ + +D YS PEQ+LQ E+E ++E++P EE + S Q+ V+ +
Sbjct: 168 EEEAQDYVNSIHIEDDP-VDKYSLPEQQLQVDYETEIVVEETPVEETSASFQSMVDTVHE 226
Query: 81 YLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ- 139
+VEEPVG+ + +YA+ILRV+KGQ S + Q S+ ++ S+WNH QP Q
Sbjct: 227 APAPAVEEPVGDAPRKSYAAILRVSKGQPASSFSTQASLHRSYPTASEWNHTTQPAAQHS 286
Query: 140 ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV 199
+VSS+ E + D EE E+E+E KSVYVRNLPP+V+E+EI +EFK FG++ +G+
Sbjct: 287 NSVSSFVPE-TGVDAAEEGLPEEEEDEPKSVYVRNLPPTVTEAEIEQEFKNFGKIIPDGI 345
Query: 200 VIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
IR RK+ G+CYAFVEFED+ GV+NA++ L
Sbjct: 346 FIRLRKEFGVCYAFVEFEDLIGVQNALKASPL 377
>gi|224129532|ref|XP_002320609.1| predicted protein [Populus trichocarpa]
gi|222861382|gb|EEE98924.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 140/209 (66%), Gaps = 7/209 (3%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 80
E +ARE V+ V + + +D YS PEQ+ Q+ E+E ++E++P +E S Q AVNA QD
Sbjct: 179 EEEARECVNSVRIDDDP-VDKYSLPEQQHQEDLETEIVVEETPVDETAASFQAAVNAVQD 237
Query: 81 YLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ- 139
+ A+ EEP+ EP K TYASI V+KGQ + SV QP V+K+ SDWNH+P PT QQ
Sbjct: 238 FPTAAPEEPLEEPPKKTYASI--VSKGQFSSSVATQPPVNKSAPTTSDWNHMPTPTAQQP 295
Query: 140 ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV 199
E+V S A E T + + DE E+KSVYVRNLP ++ EI EEFK FG + +GV
Sbjct: 296 ESVLSSAPESGMEVTEDSLGL--DEGELKSVYVRNLPSDITAEEIEEEFKHFGRIKPDGV 353
Query: 200 VIRSRKD-VGICYAFVEFEDMTGVRNAVE 227
+R+RKD VG+CYAFVEFED+ V+NA++
Sbjct: 354 FVRNRKDVVGVCYAFVEFEDLRSVQNAIK 382
>gi|297744216|emb|CBI37186.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 21 EIQAREYVSPV---DVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNA 77
E +AR+Y++ V D + + ID Y+ EQ+ QQ E E+ +E+ EE + SLQN N
Sbjct: 167 EEEARDYINSVHLEDDQVDNYIDSYTHSEQQQQQDFEVESSVEEPAVEESSASLQNVANM 226
Query: 78 AQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTT 137
Q+ A VEEPVGEP K TYASILR AKGQ + SV QP ++K P S+WN+ +
Sbjct: 227 VQEPQAAYVEEPVGEPPKKTYASILR-AKGQPSSSVAAQPVLNKISPPASEWNYTHHSSV 285
Query: 138 QQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSE 197
Q S + + EE SA+E E E SVYVRNLPPSVS +I +EFK FG +
Sbjct: 286 QPSNYPSSLVPEYGVEAVEEGSALE-EGESGSVYVRNLPPSVSTDDIEQEFKNFGRIKPG 344
Query: 198 GVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
GV IR+R + G+CYAFVEFED+ GV+NA++
Sbjct: 345 GVFIRNRMESGVCYAFVEFEDILGVQNAIKAS 376
>gi|356505062|ref|XP_003521311.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 453
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 19 GGEIQAREYVSPVDVKQNGLIDDYSFPE--QRLQQVPESENILEDSPAEELNGSLQNAVN 76
G E +AREYV+ V + + +D+YS PE Q+LQ+ E+E + E++P +E + + + +
Sbjct: 166 GLEEEAREYVNSVHIDDDP-VDEYSLPEHQQQLQEELETEIVEEETPVQEASPPIHSIAH 224
Query: 77 AAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQ--PSVS-KNISPVSDWNHVP 133
Q+ A VEE EP K TYASILRV+KGQ S PQ P S K+ P S+ NHV
Sbjct: 225 TVQEPPVALVEESFEEPPKKTYASILRVSKGQPVLSAAPQYAPQHSFKSAPPPSELNHVA 284
Query: 134 QPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGE 193
QP QQ + +S +S + EE +E+E+E+ SVYVRNLP +V+E+EI +EFK FG
Sbjct: 285 QPAVQQSSSASMYVPESGIEAAEEGYGLEEEDEVTSVYVRNLPANVTEAEIDQEFKNFGR 344
Query: 194 LSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+ +G+ IR RK++G+CYAFVEFED+ GV+NA++
Sbjct: 345 IKPDGIFIRVRKEIGVCYAFVEFEDIVGVQNALQAS 380
>gi|147794068|emb|CAN77842.1| hypothetical protein VITISV_015564 [Vitis vinifera]
Length = 607
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 39 IDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTY 98
+D Y+ EQ+ QQ E E+ +E+ EE + SLQN N Q+ A VEEPVGEP K TY
Sbjct: 245 VDSYTHSEQQQQQDFEVESSVEEPAVEESSASLQNVANMVQEPQAAYVEEPVGEPPKKTY 304
Query: 99 ASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEI 158
ASILR AKGQ + SV QP +SK P S+WN+ + Q S + + EE
Sbjct: 305 ASILR-AKGQPSSSVAAQPILSKISPPASEWNYTHHSSVQPSNYPSSLVPEYGVEAVEEG 363
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
SA+E E E SVYVRNLPPSVS +I +EFK FG + GV IR+R + G+CYAFVEFED
Sbjct: 364 SALE-EGESGSVYVRNLPPSVSTDDIEQEFKNFGRIKPGGVFIRNRMESGVCYAFVEFED 422
Query: 219 MTGVRNAVE 227
+ GV+NA++
Sbjct: 423 ILGVQNAIK 431
>gi|359480318|ref|XP_002272650.2| PREDICTED: uncharacterized protein LOC100249710 [Vitis vinifera]
Length = 465
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 120/191 (62%), Gaps = 2/191 (1%)
Query: 39 IDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTY 98
+D Y+ EQ+ QQ E E+ +E+ EE + SLQN N Q+ A VEEPVGEP K TY
Sbjct: 214 VDSYTHSEQQQQQDFEVESSVEEPAVEESSASLQNVANMVQEPQAAYVEEPVGEPPKKTY 273
Query: 99 ASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEI 158
ASILR AKGQ + SV QP ++K P S+WN+ + Q S + + EE
Sbjct: 274 ASILR-AKGQPSSSVAAQPVLNKISPPASEWNYTHHSSVQPSNYPSSLVPEYGVEAVEEG 332
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
SA+E E E SVYVRNLPPSVS +I +EFK FG + GV IR+R + G+CYAFVEFED
Sbjct: 333 SALE-EGESGSVYVRNLPPSVSTDDIEQEFKNFGRIKPGGVFIRNRMESGVCYAFVEFED 391
Query: 219 MTGVRNAVEVC 229
+ GV+NA++
Sbjct: 392 ILGVQNAIKAS 402
>gi|356572288|ref|XP_003554301.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 451
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 6/213 (2%)
Query: 19 GGEIQAREYVSPVDVKQNGLIDDYSFPE--QRLQQVPESENILEDSPAEELNGSLQNAVN 76
G E +AREY + V + + +D YS PE Q+LQ+ E+E ++E++ +E + + +
Sbjct: 166 GLEEEAREYANSVHIDDDP-VDKYSLPEHQQQLQEELETEIVVEETSVQEASPPIHTVAH 224
Query: 77 AAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQ--PSVSKNISPVSDWNHVPQ 134
Q+ A VEE EP K TYASILRV+KG S P+ P K+ P + NHV Q
Sbjct: 225 TIQEPPVALVEESFEEPPKKTYASILRVSKGLPVLSAAPKHAPHSFKSAPPPPELNHVAQ 284
Query: 135 PTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
P QQ + +S +S + EE A+E E+E+ SVYVRNLP +V+E EI +EFK FG +
Sbjct: 285 PAVQQSSSASMYAPESGTEAAEEGYALE-EDEVTSVYVRNLPANVTEVEIDQEFKNFGRI 343
Query: 195 SSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+G+ IR RK++G+CYAFVEFED+ GV+NA++
Sbjct: 344 KPDGIFIRVRKEIGVCYAFVEFEDIIGVQNALQ 376
>gi|297791475|ref|XP_002863622.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309457|gb|EFH39881.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 451
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 140/231 (60%), Gaps = 24/231 (10%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQ---QVPESENILEDSPAEELNG 69
VP++++ E +AR+YV+ V +K + L+D YS E + Q +V E E +E++P EE+
Sbjct: 159 VPDYVL--EEEARDYVNAVQIKDD-LVDKYSLQEDQHQPQHEVYEDEVAIEETPREEV-- 213
Query: 70 SLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSD 128
AV+ ++ A VEEPVGE K +YASIL+VAK + P V QPS +KN +++
Sbjct: 214 ----AVDVVHEHRAAPVEEPVGEKSKMSYASILKVAKEAAAVPVVATQPSYNKNSQDINE 269
Query: 129 WNH---VPQPTTQ------QETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSV 179
W+ P P Q++ +S Y + E+ S ED E KSVYVRNLP +
Sbjct: 270 WDQPRRTPSPQLAAPLAPVQQSNASSTYVSDYGAEAEDGSGFEDFE-FKSVYVRNLPSDI 328
Query: 180 SESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRNAVEVC 229
S SEI EEFK FG + +GV +R+RKDV G+CYAFVEFEDMT V NA++
Sbjct: 329 SASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIKAS 379
>gi|84468432|dbj|BAE71299.1| hypothetical protein [Trifolium pratense]
Length = 458
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 141/230 (61%), Gaps = 21/230 (9%)
Query: 14 PNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQ--RLQQVPESENILEDSPAEELNGSL 71
P G E +AREYV+ V + + +D YS PEQ +LQ+ ESE ++E++PA+E + +
Sbjct: 160 PASDYGFEEEAREYVNSVHIDDDP-VDKYSLPEQHQQLQEDFESEVVVEETPAQEASPQV 218
Query: 72 QNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQ--PSVS-KNISPVSD 128
+ ++ A VEE EP K TYASILRVAKGQS S PQ P S K+ P SD
Sbjct: 219 YSVAQTIRETPVAHVEESYEEPAKKTYASILRVAKGQSVVSAAPQHAPQHSFKSAPPPSD 278
Query: 129 WNHVPQPTTQQETVSSYAYEKSW------ADTGEEIS---AVEDEEEIKSVYVRNLPPSV 179
+NHV QP QQ V A+++S +++G E + +EEE+ SVYVRNLP +
Sbjct: 279 FNHVTQPAVQQSVVQP-AFQQSRSASTYVSESGAEATEESYKFEEEEVTSVYVRNLPGDI 337
Query: 180 SESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+E+EI EEFK FG + +G+ ++G+CYAFVEFED+ GV+NA++
Sbjct: 338 TEAEIEEEFKSFGRIKPDGIF-----EIGVCYAFVEFEDVVGVQNALQAS 382
>gi|312282633|dbj|BAJ34182.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 24/231 (10%)
Query: 13 VPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQ---QVPESENILEDSPAEELNG 69
VP++++ E +AR+YV+ V +K + L+D YS E + Q + E E +E++P EE+
Sbjct: 159 VPDYVL--EQEARDYVNAVQIKDD-LVDKYSLQEDQHQPQHEDYEDEVAVEETPREEV-- 213
Query: 70 SLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSD 128
V+A + A EEPVGE K +YASILRV K S P QP+ +KN V++
Sbjct: 214 ----VVDAVHEPWAAPAEEPVGEKSKMSYASILRVVKEAASVPVAATQPTHNKNSQDVNE 269
Query: 129 WNH---VPQPTTQ------QETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSV 179
W+ P P Q++ +S Y + E+ ED E IKSVYVRNLP ++
Sbjct: 270 WDQPLRTPSPQVAAPLAPAQQSNASSPYVTDYGAEAEDGFGFEDFE-IKSVYVRNLPSNI 328
Query: 180 SESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRNAVEVC 229
S SEI EEFK FG + +GV +R+RKDV G+CYAFVE+EDMT V NA++
Sbjct: 329 SASEIEEEFKNFGTIKPDGVFLRTRKDVIGVCYAFVEYEDMTSVENAIKAS 379
>gi|15240057|ref|NP_199209.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|9758555|dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana]
gi|19347889|gb|AAL86001.1| unknown protein [Arabidopsis thaliana]
gi|21281087|gb|AAM45065.1| unknown protein [Arabidopsis thaliana]
gi|332007655|gb|AED95038.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 450
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 130/224 (58%), Gaps = 25/224 (11%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQ---QVPESENILEDSPAEELNGSLQNAVNA 77
E +A +YV+ V +K + L+D YS E + Q + E E +E++P EE+ AV+
Sbjct: 165 EEEASDYVNAVQIKDD-LVDKYSLQEDQHQPQHEDYEDEVAIEETPREEV------AVDV 217
Query: 78 AQDYLPASVEEPVGEPQKHTYASILRVAKGQST-PSVTPQPSVSKNISPVSDWNH----- 131
++ A VEEPVGE K +YASIL+VAK +T P QPS +K+ +++W+
Sbjct: 218 VHEHRAAPVEEPVGEKSKMSYASILKVAKEAATVPVAATQPSYNKSSQDINEWDQPMRTP 277
Query: 132 -----VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAE 186
P QQ S+Y + E+ S ED E KSVYVRNLP +S SEI E
Sbjct: 278 SPQLAAPLAPIQQSNSSTYV--SDYGAEAEDGSGFEDFE-FKSVYVRNLPSDISASEIEE 334
Query: 187 EFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRNAVEVC 229
EFK FG + +GV +R+RKDV G+CYAFVEFEDMT V NA++
Sbjct: 335 EFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIKAS 378
>gi|42573565|ref|NP_974879.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|332007654|gb|AED95037.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 391
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 130/224 (58%), Gaps = 25/224 (11%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQ---QVPESENILEDSPAEELNGSLQNAVNA 77
E +A +YV+ V +K + L+D YS E + Q + E E +E++P EE+ AV+
Sbjct: 106 EEEASDYVNAVQIKDD-LVDKYSLQEDQHQPQHEDYEDEVAIEETPREEV------AVDV 158
Query: 78 AQDYLPASVEEPVGEPQKHTYASILRVAKGQST-PSVTPQPSVSKNISPVSDWNH----- 131
++ A VEEPVGE K +YASIL+VAK +T P QPS +K+ +++W+
Sbjct: 159 VHEHRAAPVEEPVGEKSKMSYASILKVAKEAATVPVAATQPSYNKSSQDINEWDQPMRTP 218
Query: 132 -----VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAE 186
P QQ S+Y + E+ S ED E KSVYVRNLP +S SEI E
Sbjct: 219 SPQLAAPLAPIQQSNSSTYV--SDYGAEAEDGSGFEDFE-FKSVYVRNLPSDISASEIEE 275
Query: 187 EFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRNAVEVC 229
EFK FG + +GV +R+RKDV G+CYAFVEFEDMT V NA++
Sbjct: 276 EFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIKAS 319
>gi|357510171|ref|XP_003625374.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
gi|355500389|gb|AES81592.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
Length = 452
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 139/228 (60%), Gaps = 20/228 (8%)
Query: 14 PNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPE---SENILEDSPAEELNGS 70
P G E +AR+YV+ V + + +D YS PEQ+ QQ+ E +E +++++P +E +
Sbjct: 159 PASDYGFEEEARDYVNSVHIDDDP-VDKYSLPEQQQQQLQEDFETEVVVDETPVQEASPP 217
Query: 71 LQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWN 130
+ N + ++ A VEE EP K TYASILR AKGQS S PQ + P S++N
Sbjct: 218 VHNVAHTIRETPAAPVEESFEEPAKKTYASILR-AKGQSALSAAPQ-----HAPPPSEYN 271
Query: 131 HVPQPTTQQETVSSYAYEKS------WADTGEEISAVEDEEE---IKSVYVRNLPPSVSE 181
HV QP QQ +V+ A+++S +++G E + E + SVYVRNLP ++E
Sbjct: 272 HVTQPAVQQ-SVAQPAFQQSSSASAYVSESGPEAAEEGYRFEEEEVTSVYVRNLPADITE 330
Query: 182 SEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+EI +EFK FG + +G+ IR R+++G+CYAFVEFED+ G +NA++
Sbjct: 331 AEIDQEFKNFGRIKPDGIFIRVRQEIGVCYAFVEFEDVVGTQNALQAS 378
>gi|388500522|gb|AFK38327.1| unknown [Medicago truncatula]
Length = 452
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 139/228 (60%), Gaps = 20/228 (8%)
Query: 14 PNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPE---SENILEDSPAEELNGS 70
P G E +AR+YV+ V + + +D YS PEQ+ QQ+ E +E +++++P +E +
Sbjct: 159 PASDYGFEEEARDYVNSVHIDDDP-VDKYSLPEQQQQQLQEDFETEVVVDETPVQEASPP 217
Query: 71 LQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWN 130
+ N + ++ A EE EP K TYASILR AKGQS SV PQ + P S++N
Sbjct: 218 VHNVAHTIRETPAAPAEESFEEPAKKTYASILR-AKGQSALSVAPQ-----HAPPPSEYN 271
Query: 131 HVPQPTTQQETVSSYAYEKS------WADTGEEISAVEDEEE---IKSVYVRNLPPSVSE 181
HV QP QQ +V+ A+++S +++G E + E + SVYVRNLP ++E
Sbjct: 272 HVTQPAVQQ-SVAQPAFQQSSSASAYVSESGPEAAEEGYRFEEEEVTSVYVRNLPADITE 330
Query: 182 SEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+EI +EFK FG + +G+ IR R+++G+CYAFVEFED+ G +NA++
Sbjct: 331 AEIDQEFKNFGRIKPDGIFIRVRQEIGVCYAFVEFEDVVGTQNALQAS 378
>gi|347954129|gb|AEP33647.1| RNA-binding Ras-GAP SH3 binding protein [Triticum aestivum]
gi|347954131|gb|AEP33648.1| RNA-binding Ras-GAP SH3 binding protein [Triticum aestivum]
Length = 435
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 121/212 (57%), Gaps = 24/212 (11%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAV------NAAQDYLP 83
PV ++N +D Y++ E LQ V +S+N ++S EE S N + A +
Sbjct: 170 PVTSEENDAVDSYTYSEPPLQVVSQSDNWGDESLQEEALSSFSNGMAMAPEEPAQPPPVQ 229
Query: 84 ASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQ--QET 141
VEEPVGEP K TYASILR AK P P +PV+ P PTT+ Q T
Sbjct: 230 PHVEEPVGEPVKKTYASILRTAKA-------PPPFPFAQSAPVNK----PHPTTEASQAT 278
Query: 142 V--SSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV 199
+ SS A +K +D E DEEE KSVYV N+P +V+E+++ EFKKFG+L +GV
Sbjct: 279 LGTSSVAADKPKSDFYAE---GHDEEESKSVYVGNVPQNVTEADLENEFKKFGQLIPDGV 335
Query: 200 VIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
IRSRK+ G YAFVEFE+++GV NA+ L
Sbjct: 336 AIRSRKETGGYYAFVEFEELSGVHNALRASPL 367
>gi|290579509|gb|ADD51366.1| RNA-binding Ras-GAP SH3 binding protein, partial [Triticum
aestivum]
Length = 410
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 119/212 (56%), Gaps = 24/212 (11%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAV------NAAQDYLP 83
PV ++N +D Y++ E Q V +S+N ++S EE S N + A +
Sbjct: 156 PVTSEENDAVDSYTYSEPPQQVVSQSDNWGDESLQEEPLSSFSNGMAMAPEEPAHPPPVQ 215
Query: 84 ASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQ--QET 141
VEEPVGEP K TYASILR AK P P PVS P PTT+ Q T
Sbjct: 216 PHVEEPVGEPVKKTYASILRTAKA-------PPPFPIAQSVPVSK----PHPTTEANQAT 264
Query: 142 V--SSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV 199
+ SS A +K +D E DEEE KSVYV N+P +V+E+++ EFKKFG+L +GV
Sbjct: 265 LVTSSVAADKPKSDFYTE---GHDEEESKSVYVGNVPQNVTEADLENEFKKFGQLIPDGV 321
Query: 200 VIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
IRSRK+ G YAFVEFE+++GV NA+ L
Sbjct: 322 AIRSRKETGGYYAFVEFEELSGVHNALRASPL 353
>gi|347954125|gb|AEP33645.1| RNA-binding Ras-GAP SH3 binding protein [Triticum aestivum]
gi|347954127|gb|AEP33646.1| RNA-binding Ras-GAP SH3 binding protein [Triticum aestivum]
Length = 436
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 117/216 (54%), Gaps = 32/216 (14%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPAS---- 85
PV ++N +D Y++ E Q V +S+N ++S EE S N + A + PA
Sbjct: 171 PVTSEENDAVDCYTYSEPPQQVVSQSDNWGDESLQEEPLSSFSNGMAMAAE-EPAQPPPV 229
Query: 86 ---VEEPVGEPQKHTYASILRVAKG-------QSTPSVTPQPSVSKNISPVSDWNHVPQP 135
VEEPVGEP K TYASILR AK QS P P P+ N + +
Sbjct: 230 QPHVEEPVGEPVKKTYASILRTAKAPPLFPIAQSVPVNKPHPTTEANQATL--------- 280
Query: 136 TTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELS 195
SS A +K +D E DEEE KSVYV N+P +V+E+++ EFKKFG+L
Sbjct: 281 -----VTSSVAADKPKSDFYAE---GHDEEESKSVYVGNVPQNVTEADLENEFKKFGQLI 332
Query: 196 SEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
+GV IRSRK+ G YAFVEFE+++GV NA+ L
Sbjct: 333 PDGVAIRSRKETGGYYAFVEFEELSGVHNALRASPL 368
>gi|217070784|gb|ACJ83752.1| unknown [Medicago truncatula]
Length = 234
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 16/159 (10%)
Query: 84 ASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVS 143
A EE EP K TYASILR AKGQS SV PQ + P S++NHV QP QQ +V+
Sbjct: 13 APAEESFEEPAKKTYASILR-AKGQSALSVAPQ-----HAPPPSEYNHVTQPAVQQ-SVA 65
Query: 144 SYAYEKSWA------DTGEEISAVEDEEE---IKSVYVRNLPPSVSESEIAEEFKKFGEL 194
A+++S + ++G E + E + SVYVRNLP ++E+EI +EFK FG +
Sbjct: 66 QPAFQQSSSASAYVSESGPEAAEEGYRFEEEEVTSVYVRNLPADITEAEIDQEFKNFGRI 125
Query: 195 SSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMW 233
+G+ IR R+++G+CYAFVEFED+ G +NA++ +
Sbjct: 126 KPDGIFIRVRQEIGVCYAFVEFEDVVGTQNALQASPIQL 164
>gi|357144262|ref|XP_003573229.1| PREDICTED: putative G3BP-like protein-like [Brachypodium
distachyon]
Length = 449
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 125/228 (54%), Gaps = 12/228 (5%)
Query: 12 TVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSL 71
T P ++ E QA + P+ ++N +D+Y++ E Q V +S+N ++ EE S
Sbjct: 156 TSPEYIHEEEGQATQGAVPITSEENDAVDNYTYSEPPQQVVSQSDNWGDEPLLEEPLSSF 215
Query: 72 QNAVNAAQD-------YLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNIS 124
N + A + P VEEPVGEP K TYASILR AK V +K
Sbjct: 216 SNGMTMAPEEPVQPAPVPPPHVEEPVGEPVKKTYASILRTAKAPPPFPVVQPVPANK-AH 274
Query: 125 PVSDWNHVPQPTTQQETV-SSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESE 183
P ++ + PT + SS A EK +D E DEEE KSVYV N+P SV+E++
Sbjct: 275 PTTEPSQAAHPTNHHSVMTSSVAAEKPRSDFYGE---AHDEEESKSVYVGNVPSSVTEAD 331
Query: 184 IAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
+ EFKKFG+L +GV IRSRK+ G YAFVEFE+++GV NA+ L
Sbjct: 332 LENEFKKFGQLIPDGVAIRSRKETGGYYAFVEFEELSGVHNALRASPL 379
>gi|218195194|gb|EEC77621.1| hypothetical protein OsI_16605 [Oryza sativa Indica Group]
Length = 396
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 129/245 (52%), Gaps = 28/245 (11%)
Query: 3 YKNETPFLLTV---PNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQR--LQQVPESEN 57
Y + FLL V + M E++A+E ++P D+++ G PE QQ P
Sbjct: 103 YSDNVYFLLLVDSLASDCMPEELEAKEALAPADIEERGPA---FMPENHEVQQQDPLEYG 159
Query: 58 IL--EDSPAEELNGSLQNAVNAAQDYLPASV---------EEPVGEPQKHTYASILRVAK 106
++ +DSP+EEL S ++ ++ QD + EEP+GEP K TYAS+LR
Sbjct: 160 VVIDDDSPSEELTPSFPSSTDSKQDAPLGPIVHPSVTTPEEEPMGEPAKQTYASVLRTKG 219
Query: 107 GQSTPSVTPQPSVSKNISPV-SDWN-HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDE 164
S ++ P S V S N H+ T Q + V +EK+ DT + S EDE
Sbjct: 220 HPSHQAIHSIPLNKATASSVESQLNGHM---TKQVQPV----HEKANLDTRYDASGPEDE 272
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
EE SVY+ NL PS S ++ + F+ FG + +GV IRSRK+ GI + FVE+EDM+G+ N
Sbjct: 273 EEFLSVYIGNLSPSTSVFDLEKVFQAFGRIKPDGVAIRSRKEAGIFFGFVEYEDMSGIHN 332
Query: 225 AVEVC 229
A+
Sbjct: 333 ALRAS 337
>gi|414887385|tpg|DAA63399.1| TPA: RNA binding protein [Zea mays]
Length = 438
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Query: 86 VEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSY 145
V+EPV EP K TYASIL+ AK + P V Q VSK P ++ N T SS
Sbjct: 227 VDEPVCEPVKKTYASILKTAKAPAFP-VAQQVPVSKTSHPTTESNQ----TQHSVMASSM 281
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
EK +D E A D+EE KSVYV N+P SVSE+++ EFKKFG L +GV IRSRK
Sbjct: 282 GTEKPRSDVFGE-GASHDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAIRSRK 340
Query: 206 DVGICYAFVEFEDMTGVRNAVEVC 229
+ G YAFVEFE+++GV NA++
Sbjct: 341 ETGGYYAFVEFEELSGVHNALKAS 364
>gi|223950471|gb|ACN29319.1| unknown [Zea mays]
Length = 436
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Query: 86 VEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSY 145
V+EPV EP K TYASIL+ AK + P V Q VSK P ++ N T SS
Sbjct: 227 VDEPVCEPVKKTYASILKTAKAPAFP-VAQQVPVSKTSHPTTESNQ----TQHSVMASSM 281
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
EK +D E A D+EE KSVYV N+P SVSE+++ EFKKFG L +GV IRSRK
Sbjct: 282 GTEKPRSDVFGE-GASHDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAIRSRK 340
Query: 206 DVGICYAFVEFEDMTGVRNAVEVC 229
+ G YAFVEFE+++GV NA++
Sbjct: 341 ETGGYYAFVEFEELSGVHNALKAS 364
>gi|414887386|tpg|DAA63400.1| TPA: hypothetical protein ZEAMMB73_693462 [Zea mays]
Length = 444
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 86 VEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSY 145
V+EPV EP K TYASIL+ AK + P V Q VSK P ++ N T SS
Sbjct: 233 VDEPVCEPVKKTYASILKTAKAPAFP-VAQQVPVSKTSHPTTESNQ----TQHSVMASSM 287
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
EK +D E A D+EE KSVYV N+P SVSE+++ EFKKFG L +GV IRSRK
Sbjct: 288 GTEKPRSDVFGE-GASHDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAIRSRK 346
Query: 206 DVGICYAFVEFEDMTGVRNAVE 227
+ G YAFVEFE+++GV NA++
Sbjct: 347 ETGGYYAFVEFEELSGVHNALK 368
>gi|226506216|ref|NP_001148672.1| LOC100282288 [Zea mays]
gi|195621256|gb|ACG32458.1| RNA binding protein [Zea mays]
Length = 438
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Query: 86 VEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSY 145
V+EPV EP K TYASIL+ AK + P V Q VSK P ++ N T SS
Sbjct: 227 VDEPVCEPVKKTYASILKTAKAPAFP-VAQQVPVSKPSHPTTESNQ----TQHSVMASSM 281
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
EK +D E A D+EE KSVYV N+P SVSE+++ EFKKFG L +GV IRSRK
Sbjct: 282 GTEKPRSDVFGE-GASHDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAIRSRK 340
Query: 206 DVGICYAFVEFEDMTGVRNAVEVC 229
+ G YAFVEFE+++GV NA++
Sbjct: 341 ETGGYYAFVEFEELSGVHNALKAS 364
>gi|215769163|dbj|BAH01392.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 391
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 121/224 (54%), Gaps = 25/224 (11%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQR--LQQVPESENIL--EDSPAEELNGSLQNAVN 76
E++A+E ++P D+++ G PE QQ P ++ +DSP+EEL S ++ +
Sbjct: 119 ELEAKEALAPADIEERGPA---FMPENHEVQQQDPLEYGVVIDDDSPSEELTPSFPSSTD 175
Query: 77 AAQDYLPASV---------EEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPV- 126
+ QD + EEP+GEP K TYAS+LR S ++ P S V
Sbjct: 176 SKQDAPLGPIVHPSVTTPEEEPMGEPAKQTYASVLRTKGHPSHQAIHSIPLNKATASSVE 235
Query: 127 SDWN-HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIA 185
S N H+ T Q + V +EK+ DT + S EDEEE SVY+ NL PS S ++
Sbjct: 236 SQLNGHM---TKQVQPV----HEKANLDTRYDASGPEDEEEFLSVYIGNLSPSTSVFDLE 288
Query: 186 EEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+ F+ FG + +GV IRSRK+ GI + FVE+EDM+G+ NA+
Sbjct: 289 KVFQAFGRIKPDGVAIRSRKEAGIFFGFVEYEDMSGIHNALRAS 332
>gi|32488304|emb|CAE03370.1| OSJNBb0065L13.13 [Oryza sativa Japonica Group]
gi|32488444|emb|CAE03377.1| OSJNBa0004N05.1 [Oryza sativa Japonica Group]
gi|116311069|emb|CAH67999.1| OSIGBa0157K09-H0214G12.10 [Oryza sativa Indica Group]
gi|222629190|gb|EEE61322.1| hypothetical protein OsJ_15429 [Oryza sativa Japonica Group]
Length = 459
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 121/223 (54%), Gaps = 25/223 (11%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQR--LQQVPESENIL--EDSPAEELNGSLQNAVN 76
E++A+E ++P D+++ G PE QQ P ++ +DSP+EEL S ++ +
Sbjct: 187 ELEAKEALAPADIEERGPA---FMPENHEVQQQDPLEYGVVIDDDSPSEELTPSFPSSTD 243
Query: 77 AAQDYLPASV---------EEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPV- 126
+ QD + EEP+GEP K TYAS+LR S ++ P S V
Sbjct: 244 SKQDAPLGPIVHPSVTTPEEEPMGEPAKQTYASVLRTKGHPSHQAIHSIPLNKATASSVE 303
Query: 127 SDWN-HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIA 185
S N H+ T Q + V +EK+ DT + S EDEEE SVY+ NL PS S ++
Sbjct: 304 SQLNGHM---TKQVQPV----HEKANLDTRYDASGPEDEEEFLSVYIGNLSPSTSVFDLE 356
Query: 186 EEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+ F+ FG + +GV IRSRK+ GI + FVE+EDM+G+ NA+
Sbjct: 357 KVFQAFGRIKPDGVAIRSRKEAGIFFGFVEYEDMSGIHNALRA 399
>gi|41052569|dbj|BAD07751.1| putative Ras-GTPase activating protein SH3 domain-binding protein 2
[Oryza sativa Japonica Group]
Length = 511
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEP 89
P+ +++ +++Y++ E Q V +S+N ++ EE S N + A + S P
Sbjct: 170 PITSEESDAVENYTYSEPPQQVVSQSDNWGDEPLPEEPISSFTNGMAMAPEEPVQSPPVP 229
Query: 90 V-------GEPQKHTYASILRVAKGQST-PSVTPQPSVSKNISPVSDWNHVPQPTTQQET 141
GEP K TYASILR AK P P P+ + + Q
Sbjct: 230 PPHVEEPVGEPVKKTYASILRTAKAPLVFPVAQPAPTRPHQATETN------QAAQHSVM 283
Query: 142 VSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
SS A EK D E AV+D+EE KSVYV N+P SVSE+++ EFKKFG L +GV I
Sbjct: 284 TSSVATEKPKTDVYGEF-AVQDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAI 342
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
RSRK+ G YAFVEFE+++GV NA++
Sbjct: 343 RSRKETGGYYAFVEFEELSGVHNALK 368
>gi|222622111|gb|EEE56243.1| hypothetical protein OsJ_05256 [Oryza sativa Japonica Group]
Length = 386
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 117/209 (55%), Gaps = 17/209 (8%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEP 89
P+ +++ +++Y++ E Q V +S+N ++ EE S N + A + S P
Sbjct: 108 PITSEESDAVENYTYSEPPQQVVSQSDNWGDEPLPEEPISSFTNGMAMAPEEPVQSPPVP 167
Query: 90 V-------GEPQKHTYASILRVAKGQSTPSVTP--QPSVSKNISPVSDWNHVPQPTTQQE 140
GEP K TYASILR AK P V P QP+ ++ ++ N Q +
Sbjct: 168 PPHVEEPVGEPVKKTYASILRTAKA---PLVFPVAQPAPTR-PHQATETNQAAQHSV--- 220
Query: 141 TVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV 200
SS A EK D E AV+D+EE KSVYV N+P SVSE+++ EFKKFG L +GV
Sbjct: 221 MTSSVATEKPKTDVYGEF-AVQDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVA 279
Query: 201 IRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
IRSRK+ G YAFVEFE+++GV NA++
Sbjct: 280 IRSRKETGGYYAFVEFEELSGVHNALKAS 308
>gi|218189991|gb|EEC72418.1| hypothetical protein OsI_05729 [Oryza sativa Indica Group]
Length = 1067
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 30 PVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEP 89
P+ +++ +++Y++ E Q V +S+N ++ EE S N + A + S P
Sbjct: 789 PITSEESDAVENYTYSEPPQQVVSQSDNWGDEPLPEEPISSFTNGMAMAPEEPVQSPPVP 848
Query: 90 V-------GEPQKHTYASILRVAKGQST-PSVTPQPSVSKNISPVSDWNHVPQPTTQQET 141
GEP K TYASILR AK P P P+ + + Q
Sbjct: 849 PPHVEEPVGEPVKKTYASILRTAKAPLVFPVAQPAPTRPHQATETN------QAAQHSVM 902
Query: 142 VSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
SS A EK D E AV+D+EE KSVYV N+P SVSE+++ EFKKFG L +GV I
Sbjct: 903 TSSVATEKPKTDVYGEF-AVQDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAI 961
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
RSRK+ G YAFVEFE+++GV NA++
Sbjct: 962 RSRKETGGYYAFVEFEELSGVHNALK 987
>gi|357164628|ref|XP_003580116.1| PREDICTED: uncharacterized protein LOC100835597 [Brachypodium
distachyon]
Length = 445
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Query: 21 EIQAREYVSPVDVKQ--NGLI-DDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNA 77
E++ + +P D K+ G+I +++ P+Q + + N ED+ E+ +L +
Sbjct: 178 ELETERFAAPADTKERDGGIIYENHEMPQQDPLEFEAAVN--EDTHFEDPAPALDALAPS 235
Query: 78 AQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSD---WNHVPQ 134
P EEPVGEP K TYAS+LR +V P P +K+ + ++ V Q
Sbjct: 236 HPASPPTPQEEPVGEPPKQTYASVLRAKLHPDHQAVQPTPH-NKSTTETAESRLGGQVAQ 294
Query: 135 PTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
QE KS DT +++S DEEE SVYV NL PS S ++ + F+ FG++
Sbjct: 295 AVPIQE--------KSNLDTRQDVSTPGDEEEFLSVYVGNLSPSTSVFDLEKVFQAFGKI 346
Query: 195 SSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+GV IRSRK+ G+ + FVE+EDM G+ +A+
Sbjct: 347 KPDGVAIRSRKEAGVFFGFVEYEDMGGIHSAL 378
>gi|242073684|ref|XP_002446778.1| hypothetical protein SORBIDRAFT_06g022250 [Sorghum bicolor]
gi|241937961|gb|EES11106.1| hypothetical protein SORBIDRAFT_06g022250 [Sorghum bicolor]
Length = 443
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 28/201 (13%)
Query: 26 EYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQDYLPAS 85
++ P++ K +I D ++PE+ + P S ++ DSP + L +
Sbjct: 202 QHQDPLEYKAGNVIYDETYPEEHIPSFPSSTDVKRDSP-----------LAPPHPPLSPT 250
Query: 86 VEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSY 145
++EPV E K TYAS+LR + T + ++ ++P + S+
Sbjct: 251 LQEPVEEAPK-TYASVLR--RNVKATMATAETQQTQQLAP--------------QAQSAP 293
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
EKS D +S EDEEE SVYV NL PS S ++ + F+ FG + +GV IRSRK
Sbjct: 294 VQEKSNLDNHRAVSTPEDEEEFLSVYVGNLSPSTSVFDLEKVFQAFGRIKPDGVAIRSRK 353
Query: 206 DVGICYAFVEFEDMTGVRNAV 226
+ G+ + FVEFEDM+G++NA+
Sbjct: 354 EAGVFFGFVEFEDMSGIQNAL 374
>gi|226531067|ref|NP_001140798.1| uncharacterized protein LOC100272873 [Zea mays]
gi|194701124|gb|ACF84646.1| unknown [Zea mays]
gi|414586363|tpg|DAA36934.1| TPA: hypothetical protein ZEAMMB73_368634 [Zea mays]
Length = 431
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 41/220 (18%)
Query: 18 MGGEIQAREYVSP----------VDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEEL 67
+ GE +A+E V P ++ K +IDD + E+ + P S ++ DSP
Sbjct: 173 LDGEPEAQETVDPAENHVQHQDYLEYKAGNVIDDETHLEEHIPPFPSSTDVKRDSPL--- 229
Query: 68 NGSLQNAVNAAQDYLPA-SVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPV 126
A + P+ ++EEPV E K TYAS+LR K ++T ++T
Sbjct: 230 ----------ALPHPPSPTLEEPVEEAPK-TYASVLRT-KSKATLAITESQQAQ------ 271
Query: 127 SDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAE 186
Q+ S+ +EKS D ++S EDEEE SVYV NL PS S ++ +
Sbjct: 272 ---------QLAQQPQSASVHEKSNLDNHRDVSVPEDEEEFLSVYVGNLSPSTSVFDLEK 322
Query: 187 EFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
F+ FG + +GV IRSRK+ G+ + FVEFEDM+G++NA+
Sbjct: 323 VFQAFGRIKPDGVAIRSRKEAGVFFGFVEFEDMSGIQNAL 362
>gi|148905793|gb|ABR16060.1| unknown [Picea sitchensis]
Length = 476
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 59 LEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPS 118
+E++P ++ S+QN A + +P +E E K +YASI++V P PS
Sbjct: 205 VEEAPHLQVLESVQNEQQPAAE-VPVLAQE---EAPKKSYASIVKVQAPVQAP--VQAPS 258
Query: 119 VSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPS 178
+ + I PV+ P Q + S + S ++ E S++E E + +S+Y++NLP +
Sbjct: 259 IPRTI-PVNVERQATAPI--QTPIPSESSGPSAPNSTENNSSLEAEADGRSIYIKNLPLN 315
Query: 179 VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
+ S++ EEFKKFG + +GV +RS K G CY FVEFE + +++A+E
Sbjct: 316 ATSSQLEEEFKKFGPIKPDGVQVRSNKQQGFCYGFVEFESSSSMQSAIEAS 366
>gi|255547171|ref|XP_002514643.1| RNA binding protein, putative [Ricinus communis]
gi|223546247|gb|EEF47749.1| RNA binding protein, putative [Ricinus communis]
Length = 464
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASIL+V KG + P + + ++P++ +P T +YA E +
Sbjct: 231 KKSYASILKVMKGNTVPRSVHAATTNVKVAPINSEKQLPNSTK-----PAYASEAIAPTS 285
Query: 155 GE-EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
G + S + +E E S+YVR+L + +E+++ E FKKFG + G+ +RS K G C+ F
Sbjct: 286 GSAQSSDIHEEVEGHSIYVRSLSFNATEAQLEEAFKKFGPIKCGGIQVRSNKQ-GFCFGF 344
Query: 214 VEFEDMTGVRNAVEV 228
VEFE ++ +++A+E
Sbjct: 345 VEFETLSSMQSALEA 359
>gi|255573386|ref|XP_002527619.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
gi|223532993|gb|EEF34758.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
communis]
Length = 462
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH-VP-QPTTQQETVSSYAYEKSWA 152
K +YASI++VA+G S P+ P+ + +SP H VP P T+ E A S
Sbjct: 233 KKSYASIVKVARGSSGPTKVYVPTRTVKVSPKKPETHSVPIAPVTEPE-----ASMPSGN 287
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
+T E +A E E E SVYVRNLP +++ +++ EF+KFG + EGV +R K G C+
Sbjct: 288 ETPESSNA-EKEVEGHSVYVRNLPYNMTTAQLEVEFEKFGPIKQEGVQVRYNKQQGYCFG 346
Query: 213 FVEFEDMTGVRNAVEVCILM 232
FVEF ++ + +A++ ++
Sbjct: 347 FVEFLSLSSMNSAIQASPMI 366
>gi|413922541|gb|AFW62473.1| hypothetical protein ZEAMMB73_312737, partial [Zea mays]
Length = 393
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 53 PESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS 112
P E + E+ P E+ + N V A A V + E K +YASI++V K
Sbjct: 207 PPEEVVDEEQPVPEVINEVPNNVAAVLATTVAPVLQ--EEAPKKSYASIVKVMK------ 258
Query: 113 VTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYV 172
VS P+P Q ++ ++ E + E E++ ++YV
Sbjct: 259 -----EVSLPAPAPPTRTAPPKPEKQSPALAPVKDVLPFSSNPENGNIQEPEDDAHAIYV 313
Query: 173 RNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILM 232
RNLP + +E+++ +EFKKFG + G+ +RS K G CY FVEFED T V++A+E +M
Sbjct: 314 RNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFCYGFVEFEDSTSVQSAIEASPVM 373
>gi|413922542|gb|AFW62474.1| hypothetical protein ZEAMMB73_312737 [Zea mays]
Length = 409
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 53 PESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS 112
P E + E+ P E+ + N V A A V + E K +YASI++V K
Sbjct: 208 PPEEVVDEEQPVPEVINEVPNNVAAVLATTVAPVLQ--EEAPKKSYASIVKVMK------ 259
Query: 113 VTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYV 172
VS P+P Q ++ ++ E + E E++ ++YV
Sbjct: 260 -----EVSLPAPAPPTRTAPPKPEKQSPALAPVKDVLPFSSNPENGNIQEPEDDAHAIYV 314
Query: 173 RNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILM 232
RNLP + +E+++ +EFKKFG + G+ +RS K G CY FVEFED T V++A+E +M
Sbjct: 315 RNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFCYGFVEFEDSTSVQSAIEASPVM 374
>gi|414587707|tpg|DAA38278.1| TPA: RNA-binding protein-like protein [Zea mays]
Length = 488
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 89 PVGEPQKHTYASILRVAKGQS--TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYA 146
P+ E K +YASI++V K P+V +P+ P+++ P PT E +
Sbjct: 250 PLKEAPKKSYASIVKVMKEHRPLAPAVPSRPA-----PPITEKQASPAPTPVTEAPAFSP 304
Query: 147 YEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+S E+ A ++YVR+LP + + ++ EEFK+FG + EG+ +RS K
Sbjct: 305 NPQSGGFQDPEVDA-------HAIYVRSLPLNATPQQLEEEFKRFGTIKHEGIQVRSNKI 357
Query: 207 VGICYAFVEFEDMTGVRNAVE 227
G CY FVEFED + V+ A+E
Sbjct: 358 QGFCYGFVEFEDASAVQAAIE 378
>gi|414587706|tpg|DAA38277.1| TPA: hypothetical protein ZEAMMB73_017117 [Zea mays]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 89 PVGEPQKHTYASILRVAKGQS--TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYA 146
P+ E K +YASI++V K P+V +P+ P+++ P PT E +
Sbjct: 250 PLKEAPKKSYASIVKVMKEHRPLAPAVPSRPA-----PPITEKQASPAPTPVTEAPAFSP 304
Query: 147 YEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+S E+ A ++YVR+LP + + ++ EEFK+FG + EG+ +RS K
Sbjct: 305 NPQSGGFQDPEVDA-------HAIYVRSLPLNATPQQLEEEFKRFGTIKHEGIQVRSNKI 357
Query: 207 VGICYAFVEFEDMTGVRNAVE 227
G CY FVEFED + V+ A+E
Sbjct: 358 QGFCYGFVEFEDASAVQAAIE 378
>gi|226532660|ref|NP_001150471.1| LOC100284101 [Zea mays]
gi|195639480|gb|ACG39208.1| RNA-binding protein-like [Zea mays]
Length = 488
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 89 PVGEPQKHTYASILRVAKGQS--TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYA 146
P+ E K +YASI++V K P+V +P+ P+++ P PT E +
Sbjct: 250 PLKEAPKKSYASIVKVMKEHRPLAPAVPSRPA-----PPITEKQASPAPTPVTEAPAFSP 304
Query: 147 YEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+S E+ A ++YVR+LP + + ++ EEFK+FG + EG+ +RS K
Sbjct: 305 NPQSGGFQDPEVDA-------HAIYVRSLPLNATPQQLEEEFKRFGTIKHEGIQVRSNKI 357
Query: 207 VGICYAFVEFEDMTGVRNAVE 227
G CY FVEFED + V+ A+E
Sbjct: 358 QGFCYGFVEFEDASAVQAAIE 378
>gi|30697455|ref|NP_200906.2| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|10177321|dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana]
gi|17063173|gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana]
gi|27764908|gb|AAO23575.1| At5g60980/MSL3_100 [Arabidopsis thaliana]
gi|332010024|gb|AED97407.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 460
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 89 PVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
P G+ KH+YASIL+ K S+P+ P V++N P P Q+ T
Sbjct: 221 PQGDAPKHSYASILKQMK--SSPA--PTTHVARN-------KPRPAPVNQKLTAPPAEPA 269
Query: 149 KSWADTGEE----ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
+ E S V+ E++ S+YVRNLP + +++ E FK FG + EG+ +RS
Sbjct: 270 ARPEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSN 329
Query: 205 KDVGICYAFVEFEDMTGVRNAVEVC 229
K G C+ FVEFE +G ++A+E
Sbjct: 330 KQQGFCFGFVEFETSSGKQSALEAS 354
>gi|224130028|ref|XP_002328636.1| predicted protein [Populus trichocarpa]
gi|222838812|gb|EEE77163.1| predicted protein [Populus trichocarpa]
Length = 393
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 65 EELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQP---SVSK 121
E + S QN + A + PAS+E+ K +YASIL+V KG TP P S++K
Sbjct: 216 EPVTDSTQNEILATINAAPASLEDA----PKISYASILKVMKGN-----TPHPVHFSMTK 266
Query: 122 -NISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVS 180
+P+S + Q + ++ S + E S V +E E S++V+NLP +
Sbjct: 267 MRAAPIS----IEQQSANSAKSAAPEALASAGSSAGETSDVHEEAEGHSIFVKNLPFDAT 322
Query: 181 ESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++ E FK FG + G+ +RS K G C+ FVEFE M+ ++ A+E
Sbjct: 323 VEQLEEAFKHFGPIKHGGIQVRSSKQ-GFCFGFVEFETMSSMQGALEA 369
>gi|195612410|gb|ACG28035.1| RNA-binding protein-like [Zea mays]
Length = 480
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
++ E I+ E E + ++YVRNLP + +E+++ +EFKKFG + G+ +RS K G C
Sbjct: 296 FSSNPENINIQEPEVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFC 355
Query: 211 YAFVEFEDMTGVRNAVE 227
Y FVEFED T V++A+E
Sbjct: 356 YGFVEFEDSTSVQSAIE 372
>gi|219363493|ref|NP_001136675.1| uncharacterized protein LOC100216804 [Zea mays]
gi|194696592|gb|ACF82380.1| unknown [Zea mays]
gi|223948065|gb|ACN28116.1| unknown [Zea mays]
gi|238015228|gb|ACR38649.1| unknown [Zea mays]
gi|413936937|gb|AFW71488.1| RNA-binding protein-like protein [Zea mays]
Length = 480
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
++ E I+ E E + ++YVRNLP + +E+++ +EFKKFG + G+ +RS K G C
Sbjct: 296 FSSNPENINIQEPEVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFC 355
Query: 211 YAFVEFEDMTGVRNAVE 227
Y FVEFED T V++A+E
Sbjct: 356 YGFVEFEDSTSVQSAIE 372
>gi|293333102|ref|NP_001169085.1| uncharacterized protein LOC100382927 [Zea mays]
gi|223974843|gb|ACN31609.1| unknown [Zea mays]
Length = 372
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 53 PESENILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS 112
P E + E+ P E+ + N V A A V + E K +YASI++V K
Sbjct: 208 PPEEVVDEEQPVPEVINEVPNNVAAVLATTVAPVLQ--EEAPKKSYASIVKVMK------ 259
Query: 113 VTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYV 172
VS P+P Q ++ ++ E + E E++ ++YV
Sbjct: 260 -----EVSLPAPAPPTRTAPPKPEKQSPALAPVKDVLPFSSNPENGNIQEPEDDAHAIYV 314
Query: 173 RNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCI 230
RNLP + +E+++ +EFKKFG + G+ +RS K G CY FVEFED T V++A+ + +
Sbjct: 315 RNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFCYGFVEFEDSTSVQSAIRLPL 372
>gi|168005772|ref|XP_001755584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693291|gb|EDQ79644.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 402
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
D E+ + VE E + +SVYV+NLP + + SE+ + FK FG + GV +RS+K G+CYA
Sbjct: 264 DNHEDAAPVETEADGRSVYVKNLPMNYTASELEQVFKNFGPVKPNGVNVRSQKQQGVCYA 323
Query: 213 FVEFEDMTGVRNAVEVC 229
FVEFE+ T ++A+E
Sbjct: 324 FVEFEEATAAQSAIEAS 340
>gi|449440854|ref|XP_004138199.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Cucumis sativus]
Length = 472
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASI++V K S P P +V P ++ +H Q T + + D
Sbjct: 237 KKSYASIVKVPKTVSGPVYVPTTTV--RAPPPANPDH--QSTGLVKPAPVPDVSAANGDN 292
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E S + +E E S+YVRNLP + + EEFKKFG + +G+ +RS K G C+ FV
Sbjct: 293 LPESSNLHEEAEGHSIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNKQ-GFCFGFV 351
Query: 215 EFEDMTGVRNAVEVCIL 231
EFE ++ V A+E L
Sbjct: 352 EFEQLSSVHGALEASPL 368
>gi|449525281|ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-activating
protein-binding protein 1-like [Cucumis sativus]
Length = 472
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASI++V K S P P +V P ++ +H Q T + + D
Sbjct: 237 KKSYASIVKVPKTVSGPVYVPTTTV--RAPPPANPDH--QSTGLVKPAPVPDVSAANGDN 292
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E S + +E E S+YVRNLP + + EEFKKFG + +G+ +RS K G C+ FV
Sbjct: 293 LPESSNLHEEAEGHSIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNKQ-GFCFGFV 351
Query: 215 EFEDMTGVRNAVEVCIL 231
EFE ++ V A+E L
Sbjct: 352 EFEQLSSVHGALEASPL 368
>gi|242065156|ref|XP_002453867.1| hypothetical protein SORBIDRAFT_04g020120 [Sorghum bicolor]
gi|241933698|gb|EES06843.1| hypothetical protein SORBIDRAFT_04g020120 [Sorghum bicolor]
Length = 481
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E E + ++YVRNLP + +E+++ +EFKKFG + G+ +RS K G CY FVEFED T
Sbjct: 308 EPEVDAHAIYVRNLPLNATETQLEDEFKKFGTIKQNGIQVRSNKIQGFCYGFVEFEDSTS 367
Query: 222 VRNAVE 227
V++A+E
Sbjct: 368 VQSAIE 373
>gi|294462478|gb|ADE76786.1| unknown [Picea sitchensis]
Length = 304
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 19/169 (11%)
Query: 77 AAQDYLPASV--------EEPV--GEPQKHTYASILRVAKGQSTPSVTPQ-PSVSKNISP 125
+A D+LPA+V E PV + K +YASI++V K + SV Q PS+++ + P
Sbjct: 16 SAIDHLPAAVHNEGPPAHENPVVIQDAPKKSYASIVKVMKENAALSVAVQKPSLARAV-P 74
Query: 126 VSDWNHVPQPTTQQ--ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESE 183
++ Q TT + ++ ++ + D + ++ E E S+Y+++LP +V+ ++
Sbjct: 75 SAER----QATTSSPPKASANESFSSTPVDMADNSASPEAEGNGCSIYIKHLPVNVTPAQ 130
Query: 184 IAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILM 232
+ EEFKKFG + GV +RS K G CY FVEFE++ V+ A++ ++
Sbjct: 131 VEEEFKKFGAIKPSGVQVRS-KQGGFCYGFVEFEEVASVQTALQASPII 178
>gi|225451733|ref|XP_002277093.1| PREDICTED: putative G3BP-like protein-like [Vitis vinifera]
Length = 529
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH-----VPQPTTQQETVSSYAYEK 149
K +YASI++V KG S + P+ + ++P N P P + SS +
Sbjct: 234 KKSYASIVKVMKGSSGSTKVYVPTKTTKVTPAKTENQSPGLAAPAPVPESSVTSSINAPE 293
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
S +D EE+ E S+Y+RNLP +V+ S++ EF+KFG + GV +RS K
Sbjct: 294 S-SDAPEEV-------EGHSIYIRNLPLNVTVSQLEAEFQKFGPIKQGGVQVRSNKQQAY 345
Query: 210 CYAFVEFEDMTGVRNAVEVCILM 232
C+ FVEF ++ + +A++ ++
Sbjct: 346 CFGFVEFLSLSSMHSAIQASPII 368
>gi|255583972|ref|XP_002532732.1| RNA binding protein, putative [Ricinus communis]
gi|223527509|gb|EEF29634.1| RNA binding protein, putative [Ricinus communis]
Length = 478
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASI++V K P +P PS ++ +P S Q T V + S ++
Sbjct: 235 KKSYASIVKVMKENVVPFSSPAPSPIRS-APKSQE----QVTAAVTPVVTSETHVSTSNA 289
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E +A E E + S+YV+ LP + S + EFKKFG + + G+ +R +K G C+ FV
Sbjct: 290 TENANAQESEADGPSIYVKGLPLDATPSLLENEFKKFGSIRAGGIQVRCQK--GFCFGFV 347
Query: 215 EFEDMTGVRNAVEVCILMWH 234
EFE + V++A+E +M H
Sbjct: 348 EFEVASAVQSAIEASPIMIH 367
>gi|357149068|ref|XP_003574989.1| PREDICTED: uncharacterized protein LOC100845318 [Brachypodium
distachyon]
Length = 475
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 12/143 (8%)
Query: 91 GEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKS 150
G P+K +YASI++V K P+ P +P H P P VS+ A +
Sbjct: 249 GAPKK-SYASIVKVMKEAPLPAPVP-----SRPAPPKPEKHSPAPP-----VSTPAADVP 297
Query: 151 WADTGEEISAVEDEE-EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+ E + +++ E + +VYVR+LP + + ++ EEFKKFG + +G+ +RS K G
Sbjct: 298 PLSSNTEGNNIQEPEVDTHAVYVRSLPINATPDQLEEEFKKFGTIKHDGIQVRSNKIQGF 357
Query: 210 CYAFVEFEDMTGVRNAVEVCILM 232
C+ FVEFE+ + V++A++ +M
Sbjct: 358 CFGFVEFEESSSVQSAIQAKSVM 380
>gi|296082206|emb|CBI21211.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH-----VPQPTTQQETVSSYAYEK 149
K +YASI++V KG S + P+ + ++P N P P + SS +
Sbjct: 232 KKSYASIVKVMKGSSGSTKVYVPTKTTKVTPAKTENQSPGLAAPAPVPESSVTSSINAPE 291
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
S +D EE+ E S+Y+RNLP +V+ S++ EF+KFG + GV +RS K
Sbjct: 292 S-SDAPEEV-------EGHSIYIRNLPLNVTVSQLEAEFQKFGPIKQGGVQVRSNKQQAY 343
Query: 210 CYAFVEFEDMTGVRNAVEVCILM 232
C+ FVEF ++ + +A++ ++
Sbjct: 344 CFGFVEFLSLSSMHSAIQASPII 366
>gi|242075372|ref|XP_002447622.1| hypothetical protein SORBIDRAFT_06g009000 [Sorghum bicolor]
gi|241938805|gb|EES11950.1| hypothetical protein SORBIDRAFT_06g009000 [Sorghum bicolor]
Length = 493
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 89 PVGEPQKHTYASILRVAK-----GQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVS 143
P+ E K +YASI++V K G + PS K SP P +
Sbjct: 257 PLEEAPKKSYASIVKVMKEYRPPGSAVPSRPAPLKTEKQASPA------PAQVADALAFT 310
Query: 144 SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRS 203
S S+ D E + ++YVR+LP + + ++ EEFK+FG + EG+ +RS
Sbjct: 311 SNPQSGSFQDP---------EVDAHAIYVRSLPLNATPQQLEEEFKRFGAIKHEGIQVRS 361
Query: 204 RKDVGICYAFVEFEDMTGVRNAVE 227
K G CY FVEFED + V+ A+E
Sbjct: 362 NKIQGFCYGFVEFEDASAVQTAIE 385
>gi|30697452|ref|NP_851235.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|332010023|gb|AED97406.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 459
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 89 PVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
P G+ KH+YASIL+ K S+P+ P V++N P P Q+ T
Sbjct: 221 PQGDAPKHSYASILKQMK--SSPA--PTTHVARN-------KPRPAPVNQKLTAPPAEPA 269
Query: 149 KSWADTGEE----ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
+ E S V+ E++ S+YVRNLP + +++ E FK FG + EG+ +RS
Sbjct: 270 ARPEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSN 329
Query: 205 KDVGICYAFVEFEDMTGVRNAVEVC 229
K G C+ FVEFE +G ++A+E
Sbjct: 330 KQ-GFCFGFVEFETSSGKQSALEAS 353
>gi|21553535|gb|AAM62628.1| ras-GTPase-activating protein SH3-domain binding protein-like
[Arabidopsis thaliana]
Length = 459
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 89 PVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
P G+ KH+YASIL+ K P+ V++N P P Q+ T
Sbjct: 221 PQGDAPKHSYASILKQMKSSPAPTT----HVARN-------KPRPAPVNQKLTAPPAEPA 269
Query: 149 KSWADTGEE----ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
+ E S V+ E++ S+YVRNLP + +++ E FK FG + EG+ +RS
Sbjct: 270 ARPEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSN 329
Query: 205 KDVGICYAFVEFEDMTGVRNAVEVC 229
K G C+ FVEFE +G ++A+E
Sbjct: 330 KQ-GFCFGFVEFETSSGKQSALEAS 353
>gi|147803537|emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]
Length = 1100
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH-----VPQPTTQQETVSSYAYEK 149
K +YASI++V KG S + P+ + ++P N P P + SS +
Sbjct: 234 KKSYASIVKVMKGSSGSTKVYVPTKTTKVTPAKTENQSPGLAAPAPVPESSVTSSINAPE 293
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
S +D EE+ E S+Y+RNLP +V+ S++ EF+KFG + GV +RS K
Sbjct: 294 S-SDAPEEV-------EGHSIYIRNLPLNVTVSQLEAEFQKFGPIKQGGVQVRSNKQQAY 345
Query: 210 CYAFVEFEDMTGVRNAVE 227
C+ FVEF ++ + +A++
Sbjct: 346 CFGFVEFLSLSSMHSAIQ 363
>gi|359491760|ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
[Vitis vinifera]
Length = 469
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 70 SLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDW 129
S +N ++ D PA+ E+ K +YASI++V KG +T S + S
Sbjct: 219 SSENEISTVVDSAPAAQEDA----PKKSYASIVKVMKGSAT---------STPVFATSTV 265
Query: 130 NHVPQPTTQQ--ETVSSYAYEKSW---ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEI 184
P QQ + S ++W +D+ E S + EE S+YVR+LP S + ++
Sbjct: 266 RAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNIN--EEGFSIYVRHLPLSATVPQL 323
Query: 185 AEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
EEFKKFG + +G+ +RS K G C+ FVEFE ++ +++A+E
Sbjct: 324 EEEFKKFGPIKQDGIQVRSNKQ-GFCFGFVEFESLSSMQSALEAS 367
>gi|297734068|emb|CBI15315.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 70 SLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDW 129
S +N ++ D PA+ E+ P+K +YASI++V KG +T S + S
Sbjct: 250 SSENEISTVVDSAPAAQED---APKK-SYASIVKVMKGSAT---------STPVFATSTV 296
Query: 130 NHVPQPTTQQ--ETVSSYAYEKSW---ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEI 184
P QQ + S ++W +D+ E S + EE S+YVR+LP S + ++
Sbjct: 297 RAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNIN--EEGFSIYVRHLPLSATVPQL 354
Query: 185 AEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
EEFKKFG + +G+ +RS K G C+ FVEFE ++ +++A+E
Sbjct: 355 EEEFKKFGPIKQDGIQVRSNKQ-GFCFGFVEFESLSSMQSALEAS 398
>gi|413918062|gb|AFW57994.1| hypothetical protein ZEAMMB73_173182 [Zea mays]
gi|413918063|gb|AFW57995.1| hypothetical protein ZEAMMB73_173182 [Zea mays]
Length = 497
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 92 EPQKHTYASILRVAKGQSTPSVTPQPSV-SKNISPVSDWNHVPQPTTQQETVSSYAYEKS 150
E K +YASI++V K P+ P+V S+ P ++ P P + + +S
Sbjct: 263 EAPKKSYASIVKVMKEYRPPA----PAVPSRPAPPKTEKQSSPAPALVADAPAFTPNPQS 318
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
+ E+ A ++YVR+LP + + ++ EEFK+FG + +G+ +RS K G C
Sbjct: 319 GSFQDPEVDA-------HAIYVRSLPLNATPQQLEEEFKRFGAIKHDGIQVRSNKIQGFC 371
Query: 211 YAFVEFEDMTGVRNAVE 227
Y FVEFED + V+ A+E
Sbjct: 372 YGFVEFEDASAVQTAIE 388
>gi|255648360|gb|ACU24631.1| unknown [Glycine max]
Length = 442
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 95 KHTYASILRVAKGQSTPS--VTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
K +YA I++V K + PS VTP P S + S P P++ ET S
Sbjct: 225 KKSYAYIVKVMKEGAMPSSTVTPAPVKSAHKSQEQQGIAAPPPSSISET------NGSVI 278
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
+T E + E E E S+YV+ LPP+ + + + EFKKFG + S G+ +RS+K G Y
Sbjct: 279 NTNEVGNIQEAEAEGYSIYVKGLPPTATPAVLENEFKKFGPIKSGGIQVRSQK--GFSYG 336
Query: 213 FVEFEDMTGVRNAVEVC 229
FVEFE + ++A+E
Sbjct: 337 FVEFEVASAAQSALEAS 353
>gi|297793657|ref|XP_002864713.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310548|gb|EFH40972.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 91 GEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKS 150
G+ KH+YASIL+ K P+ +++P P P + T
Sbjct: 223 GDAPKHSYASILKQMKSSPAPT---------HVAPNKPR---PAPVNHKPTAPPAKPAAG 270
Query: 151 WADTGEE----ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+ E S V+ E++ S+YVRNLP + +++ E FK FG + EG+ +RS K
Sbjct: 271 PEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQ 330
Query: 207 VGICYAFVEFEDMTGVRNAVEVC 229
G C+ FVEFE +G ++A+E
Sbjct: 331 QGFCFGFVEFETSSGKQSALEAS 353
>gi|414586365|tpg|DAA36936.1| TPA: hypothetical protein ZEAMMB73_368634 [Zea mays]
Length = 163
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
EE SVYV NL PS S ++ + F+ FG + +GV IRSRK+ G+ + FVEFEDM+G++N
Sbjct: 33 EEFLSVYVGNLSPSTSVFDLEKVFQAFGRIKPDGVAIRSRKEAGVFFGFVEFEDMSGIQN 92
Query: 225 AV 226
A+
Sbjct: 93 AL 94
>gi|356527334|ref|XP_003532266.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 462
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 95 KHTYASILRVAKGQSTPS--VTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
K +YA I++V K + PS VTP P S + S P P++ ET S
Sbjct: 225 KKSYAYIVKVMKEGAMPSSTVTPVPVKSAHKSQEQQGIAAPPPSSISET------NGSVI 278
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
+T E + E E E S+YV+ LPP+ + + + EFKKFG + S G+ +RS+K G Y
Sbjct: 279 NTNEVGNIQEAEAEGYSIYVKGLPPTATPAVLENEFKKFGPIKSGGIQVRSQK--GFSYG 336
Query: 213 FVEFEDMTGVRNAVEVC 229
FVEFE + ++A+E
Sbjct: 337 FVEFEVASAAQSALEAS 353
>gi|125582201|gb|EAZ23132.1| hypothetical protein OsJ_06818 [Oryza sativa Japonica Group]
Length = 480
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
++ E + E E + ++YVR+LP + + +++ +EFKKFG + +G+ +RS K G C
Sbjct: 299 FSSNAESSNTHEPEVDAHAIYVRSLPLNATTTQLEDEFKKFGTIKPDGIQVRSHKIQGFC 358
Query: 211 YAFVEFEDMTGVRNAVEVCILM 232
Y FVEFE+ T V++A+E +M
Sbjct: 359 YGFVEFEEATAVQSAIEASPVM 380
>gi|48716424|dbj|BAD23032.1| putative Ras-GTPase-activating protein binding protein 1 [Oryza
sativa Japonica Group]
gi|215687229|dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
++ E + E E + ++YVR+LP + + +++ +EFKKFG + +G+ +RS K G C
Sbjct: 299 FSSNAESSNTHEPEVDAHAIYVRSLPLNATTTQLEDEFKKFGTIKPDGIQVRSHKIQGFC 358
Query: 211 YAFVEFEDMTGVRNAVEVCILM 232
Y FVEFE+ T V++A+E +M
Sbjct: 359 YGFVEFEEATAVQSAIEASPVM 380
>gi|125539547|gb|EAY85942.1| hypothetical protein OsI_07304 [Oryza sativa Indica Group]
Length = 482
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
++ E + E E + ++YVR+LP + + +++ +EFKKFG + +G+ +RS K G C
Sbjct: 301 FSSNAESSNTHEPEVDAHAIYVRSLPLNATTTQLEDEFKKFGTIKPDGIQVRSHKIQGFC 360
Query: 211 YAFVEFEDMTGVRNAVEVCILM 232
Y FVEFE+ T V++A+E +M
Sbjct: 361 YGFVEFEEATAVQSAIEASPVM 382
>gi|224034287|gb|ACN36219.1| unknown [Zea mays]
Length = 497
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 92 EPQKHTYASILRVAKGQSTPSVTPQPSV-SKNISPVSDWNHVPQPTTQQETVSSYAYEKS 150
E K +YASI++V K P+ P+V S+ P ++ P P + + +S
Sbjct: 263 EAPKKSYASIVKVMKEYRPPA----PAVPSRPAPPKTEKQSSPAPALVADAPAFTPNPQS 318
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
+ E+ A + YVR+LP + + ++ EEFK+FG + +G+ +RS K G C
Sbjct: 319 GSFQDPEVDA-------HATYVRSLPLNATPQQLEEEFKRFGAIKHDGIQVRSNKIQGFC 371
Query: 211 YAFVEFEDMTGVRNAVE 227
Y FVEFED + V+ A+E
Sbjct: 372 YGFVEFEDASAVQTAIE 388
>gi|356526507|ref|XP_003531859.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 462
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 57 NILEDSPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQ 116
N +DS A EL ++AQD P K +YASI++V KG S P+
Sbjct: 214 NGNDDSQATEL-------ASSAQDDAP-----------KKSYASIVKVQKGSSVPTKVYV 255
Query: 117 PSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLP 176
P+ + P + V + E V A E + + E S +E E S+Y+RNLP
Sbjct: 256 PTNTLKSGPNKTESKVVESVESTE-VPEAALE---SVSNPESSDAHEEVEGHSIYIRNLP 311
Query: 177 PSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+V+ +++ EFKKFG + G+ +R+ K G C+ FVEF + + +A++
Sbjct: 312 LNVTVAQLELEFKKFGPIKPGGIQVRNNKQQGYCFGFVEFLSLNSMNSAIQA 363
>gi|356566255|ref|XP_003551349.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 466
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV--PQPTTQQETVSSYAYEKSWA 152
K +YA I++V K + PS T P K+ + + P P++ ET S
Sbjct: 224 KKSYAYIVKVMKEGAAPSSTVTPVSVKSAHKSQEQQGIAAPPPSSISET------NGSII 277
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
+T E + E E E S+YV+ LPP+ + + + EFKKFG + S G+ +RS+K G +
Sbjct: 278 NTNEVGNNQETEAEGYSIYVKGLPPTATPAVLENEFKKFGPIKSGGIQVRSQK--GFSFG 335
Query: 213 FVEFEDMTGVRNAVEVCILMWH 234
FVEFE + V++A+E ++ +
Sbjct: 336 FVEFEVASAVQSALEASPILIN 357
>gi|115457942|ref|NP_001052571.1| Os04g0372800 [Oryza sativa Japonica Group]
gi|21742151|emb|CAD40577.1| OSJNBa0069D17.2 [Oryza sativa Japonica Group]
gi|113564142|dbj|BAF14485.1| Os04g0372800 [Oryza sativa Japonica Group]
gi|125590076|gb|EAZ30426.1| hypothetical protein OsJ_14477 [Oryza sativa Japonica Group]
gi|215678717|dbj|BAG95154.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 486
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 92 EPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQE-----TVSSYA 146
E K +YASI++V K + PQ +S P P Q++ V+ A
Sbjct: 255 EAPKKSYASIVKVMK-----EIPPQ---------ISAIPSRPAPPKQEKQVAPAPVAPVA 300
Query: 147 YEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+++ E + E E + ++YVRNLP S + ++ E FKKFG + +G+ +RS K
Sbjct: 301 DAPTFSPNPESSNIQEAEVDAHAIYVRNLPLSATPEQLEEAFKKFGAIKPDGIQVRSHKI 360
Query: 207 VGICYAFVEFEDMTGVRNAV 226
G CY FVEFED + V++A+
Sbjct: 361 QGFCYGFVEFEDPSSVQSAI 380
>gi|116309580|emb|CAH66639.1| OSIGBa0140A01.7 [Oryza sativa Indica Group]
Length = 488
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 92 EPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQE-----TVSSYA 146
E K +YASI++V K + PQ +S P P Q++ V+ A
Sbjct: 257 EAPKKSYASIVKVMK-----EIPPQ---------ISAIPSRPAPPKQEKQVAPAPVAPVA 302
Query: 147 YEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
+++ E + E E + ++YVRNLP S + ++ E FKKFG + +G+ +RS K
Sbjct: 303 DAPTFSPNPESSNIQEAEVDAHAIYVRNLPLSATPEQLEEAFKKFGAIKPDGIQVRSHKI 362
Query: 207 VGICYAFVEFEDMTGVRNAV 226
G CY FVEFED + V++A+
Sbjct: 363 QGFCYGFVEFEDPSSVQSAI 382
>gi|224141523|ref|XP_002324119.1| predicted protein [Populus trichocarpa]
gi|222867121|gb|EEF04252.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQ---PTTQQETVSSYAYEKSW 151
K +YASI++VAKG P P+ + + P N + P + ET
Sbjct: 232 KKSYASIVKVAKGSLLPIKVYLPANTTKMVPKRTENQSEKSVAPVLEPET------SVPS 285
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
++ E S+ ++E E S+Y+RNLP +++ S++ EF+KFG + GV +R + G C+
Sbjct: 286 SNDAPETSSAQEEVEGHSIYIRNLPFNLTVSQLEAEFEKFGPIKEGGVQVRYNRQQGYCF 345
Query: 212 AFVEFEDMTGVRNAVE 227
FVEF + +A+E
Sbjct: 346 GFVEFHSPNSMNSAIE 361
>gi|224070084|ref|XP_002303112.1| predicted protein [Populus trichocarpa]
gi|222844838|gb|EEE82385.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 21 EIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 80
E +AREYV+ V + + +D YS PEQ+ QQ E+E +++++P E S Q+AVN QD
Sbjct: 184 EEEAREYVNSVRIDDDP-VDKYSLPEQQEQQDFETEIVVDETPVVETPASFQSAVNVGQD 242
Query: 81 YLPASVEEPVGEPQKHTYASI 101
+ A+ EEP+ EPQK TYASI
Sbjct: 243 FPTAAPEEPMEEPQKKTYASI 263
>gi|334185613|ref|NP_001189969.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|332643464|gb|AEE76985.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 587
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 18/151 (11%)
Query: 90 VGEPQKHTYASILRVAKGQSTP-SVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
GE K +YASI++V K + P S + P+ + H+P PT E
Sbjct: 337 TGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPLPTPLSEK------- 389
Query: 149 KSWADTGEEISAVEDEEEIK-----SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRS 203
+D+G ++ E+ +E + S+Y++ LP + + + EF+KFG + + G+ +RS
Sbjct: 390 ---SDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS 446
Query: 204 RKDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
+K G C+ FVEFE + +++A+E +M +
Sbjct: 447 QK--GFCFGFVEFESASSMQSAIEASPVMLN 475
>gi|9294171|dbj|BAB02073.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 18/151 (11%)
Query: 90 VGEPQKHTYASILRVAKGQSTP-SVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
GE K +YASI++V K + P S + P+ + H+P PT E
Sbjct: 223 TGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPLPTPLSEK------- 275
Query: 149 KSWADTGEEISAVEDEEEIK-----SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRS 203
+D+G ++ E+ +E + S+Y++ LP + + + EF+KFG + + G+ +RS
Sbjct: 276 ---SDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS 332
Query: 204 RKDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
+K G C+ FVEFE + +++A+E +M +
Sbjct: 333 QK--GFCFGFVEFESASSMQSAIEASPVMLN 361
>gi|30687772|ref|NP_189151.2| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|17979475|gb|AAL50074.1| AT3g25150/MJL12_9 [Arabidopsis thaliana]
gi|21360395|gb|AAM47313.1| AT3g25150/MJL12_9 [Arabidopsis thaliana]
gi|332643463|gb|AEE76984.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 488
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 18/151 (11%)
Query: 90 VGEPQKHTYASILRVAKGQSTP-SVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYE 148
GE K +YASI++V K + P S + P+ + H+P PT E
Sbjct: 238 TGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPLPTPLSEK------- 290
Query: 149 KSWADTGEEISAVEDEEEIK-----SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRS 203
+D+G ++ E+ +E + S+Y++ LP + + + EF+KFG + + G+ +RS
Sbjct: 291 ---SDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRS 347
Query: 204 RKDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
+K G C+ FVEFE + +++A+E +M +
Sbjct: 348 QK--GFCFGFVEFESASSMQSAIEASPVMLN 376
>gi|125547949|gb|EAY93771.1| hypothetical protein OsI_15553 [Oryza sativa Indica Group]
Length = 409
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E E + ++YVRNLP S + ++ E FKKFG + +G+ +RS K G CY FVEFED +
Sbjct: 239 EAEVDAHAIYVRNLPLSATPEQLEEAFKKFGAIKPDGIQVRSHKIQGFCYGFVEFEDPSS 298
Query: 222 VRNAV 226
V++A+
Sbjct: 299 VQSAI 303
>gi|357167359|ref|XP_003581124.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Brachypodium distachyon]
Length = 485
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 92 EPQKHTYASILRVAKGQSTP-SVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKS 150
E K +YASI++V K P SV P + P P +++
Sbjct: 257 EAPKKSYASIVKVMKAVLPPNSVVP---------------YRPAPPKKEKQAPPTPAPAP 301
Query: 151 WADT-----GEEISAVEDEE-EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
D E S ++D E + +VY++NLP + S++ EEFK+FG + +G+ +RS
Sbjct: 302 VVDAPAFSPNPESSNIQDPEVDALAVYIKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSH 361
Query: 205 KDVGICYAFVEFEDMTGVRNAV 226
K G CY F+EFED + V++A+
Sbjct: 362 KIQGFCYGFIEFEDASSVQSAL 383
>gi|326490844|dbj|BAJ90089.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 157 EISAVEDEE-EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E S ++D E + +VYV+NLP + S++ EEFK+FG + +G+ +RS K G CY F+E
Sbjct: 43 ESSNIQDPEVDALAVYVKNLPLHATPSQLEEEFKRFGTIKHDGIQVRSHKIQGFCYGFIE 102
Query: 216 FEDMTGVRNAV 226
FED + V++A+
Sbjct: 103 FEDASSVQSAL 113
>gi|115446231|ref|NP_001046895.1| Os02g0497700 [Oryza sativa Japonica Group]
gi|113536426|dbj|BAF08809.1| Os02g0497700, partial [Oryza sativa Japonica Group]
Length = 169
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
E + ++YVR+LP + + +++ +EFKKFG + +G+ +RS K G CY FVEFE+ T V+
Sbjct: 1 EVDAHAIYVRSLPLNATTTQLEDEFKKFGTIKPDGIQVRSHKIQGFCYGFVEFEEATAVQ 60
Query: 224 NAVEVCILM 232
+A+E +M
Sbjct: 61 SAIEASPVM 69
>gi|212723160|ref|NP_001132368.1| uncharacterized protein LOC100193813 [Zea mays]
gi|194694198|gb|ACF81183.1| unknown [Zea mays]
Length = 222
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
E + ++YVR+LP + + ++ EEFK+FG + +G+ +RS K G CY FVEFED + V+
Sbjct: 50 EVDAHAIYVRSLPLNATPQQLEEEFKRFGAIKHDGIQVRSNKIQGFCYGFVEFEDASAVQ 109
Query: 224 NAVEV 228
A+E
Sbjct: 110 TAIEA 114
>gi|359495838|ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264206 [Vitis vinifera]
gi|296084617|emb|CBI25667.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASI++V K S P +P P + + + + QQ TV+ + A+
Sbjct: 225 KKSYASIVKVMKESSVPFSSPTPIPPRPVPKIQE---------QQVTVAPLPTPGAEANA 275
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E + E E + S+Y+R LP + + + + +EFKKFG + S GV +RS K G C+ FV
Sbjct: 276 IENGNNQEGEADGHSIYIRGLPSNATPALLEDEFKKFGPIKSGGVQVRSNKQ-GFCFGFV 334
Query: 215 EFEDMTGVRNAVEVC 229
EFE + V++A+E
Sbjct: 335 EFEVASAVQSAMEAS 349
>gi|255638534|gb|ACU19575.1| unknown [Glycine max]
Length = 461
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 94 QKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWAD 153
+K +YASI++V K S + P+ + P N V E+V S ++ D
Sbjct: 230 EKKSYASIVKVQKEGSVATKVYVPTNTLKSGPNKTENKV------VESVESTEVSEAALD 283
Query: 154 T--GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
+ E S +E E S+Y+RNLP +V+ +++ EFKKFG + G+ +R+ K G C+
Sbjct: 284 SVNNPESSDAHEEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNNKQQGYCF 343
Query: 212 AFVEFEDMTGVRNAVEVC 229
FVEF + + +A++
Sbjct: 344 GFVEFLSLNSMNSAIQAS 361
>gi|357505145|ref|XP_003622861.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
gi|355497876|gb|AES79079.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
Length = 522
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 95 KHTYASILRVAKGQSTPS-VTPQPSVSKNISPVSDWNHV-PQPTTQQETVSSYAYEKSWA 152
K +YASIL+V KG + PS V SV +I + P P++ ET S
Sbjct: 237 KKSYASILKVMKGAAAPSSVMTAASVRTSIKIQEQQSAAAPSPSSVPET------NGSSI 290
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
T E + E E E S+Y++ LP + + + + FKKFG + S GV +R+ K G +
Sbjct: 291 STNEGGNNQETEAEGYSIYLKGLPGNATHALVENMFKKFGPIKSGGVQVRTAK--GFHFG 348
Query: 213 FVEFEDMTGVRNAVEVCIL 231
FVEFE+ + +A+E +L
Sbjct: 349 FVEFEEESAALSAIESILL 367
>gi|356568750|ref|XP_003552573.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
[Glycine max]
Length = 461
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 94 QKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWAD 153
+K +YASI++V K S + P+ + P N V E+V S ++ D
Sbjct: 230 EKKSYASIVKVQKEGSVATKVYVPTNTLKSGPNKTENKV------VESVESTEVSEAALD 283
Query: 154 --TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
T S +E E S+Y+RNLP +V+ +++ EFKKFG + G+ +R+ K G C+
Sbjct: 284 SVTXPXNSDAHEEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNNKQQGYCF 343
Query: 212 AFVEFEDMTGVRNAVEVC 229
FVEF + + +A++
Sbjct: 344 GFVEFLSLNSMNSAIQAS 361
>gi|218193055|gb|EEC75482.1| hypothetical protein OsI_12070 [Oryza sativa Indica Group]
Length = 539
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 95 KHTYASILRVAKGQS-TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWAD 153
K +YASI++V K S TP V P+P+ + V + + + SS E + D
Sbjct: 284 KKSYASIVKVMKEVSLTPVVKPKPAPKHVVKTV-------EASEKPSVKSSQTVEITPND 336
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
+ + ++E+ SV+V++LP +V+ + EEFKKFG + G+ +R+ K C+ F
Sbjct: 337 NNDAENNTSNDEQGYSVFVKSLPHNVTVQTVEEEFKKFGAIKPGGIQVRNNKIDRFCFGF 396
Query: 214 VEFEDMTGVRNAVEV 228
+EFE ++ A+E
Sbjct: 397 IEFESQQSMQAAIEA 411
>gi|115453553|ref|NP_001050377.1| Os03g0418800 [Oryza sativa Japonica Group]
gi|31126693|gb|AAP44616.1| putative GAP SH3 binding protein [Oryza sativa Japonica Group]
gi|37718822|gb|AAR01693.1| putative GAP SH3 binding protein [Oryza sativa Japonica Group]
gi|108708852|gb|ABF96647.1| Nuclear transport factor 2 domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113548848|dbj|BAF12291.1| Os03g0418800 [Oryza sativa Japonica Group]
gi|215678748|dbj|BAG95185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625132|gb|EEE59264.1| hypothetical protein OsJ_11284 [Oryza sativa Japonica Group]
Length = 488
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 95 KHTYASILRVAKGQS-TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWAD 153
K +YASI++V K S TP V P+P+ + V + + + SS E + D
Sbjct: 233 KKSYASIVKVMKEVSLTPVVKPKPAPKHVVKTV-------EASEKPSVKSSQTVEITPND 285
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
+ + ++E+ SV+V++LP +V+ + EEFKKFG + G+ +R+ K C+ F
Sbjct: 286 NNDAENNTSNDEQGYSVFVKSLPHNVTVQTVEEEFKKFGAIKPGGIQVRNNKIDRFCFGF 345
Query: 214 VEFEDMTGVRNAVEVC 229
+EFE ++ A+E
Sbjct: 346 IEFESQQSMQAAIEAS 361
>gi|147842983|emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]
Length = 524
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
K +YASI++V K + SV + VP+ QQ TV+ + A+
Sbjct: 258 KKSYASIVKVMK---------ESSVPFSSPTPXPXRPVPKIQEQQVTVAPLPTPGAEANA 308
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E + + E + S+Y+R LP + + + + +EFKKFG + S GV +RS K G C+ FV
Sbjct: 309 IENGNNQDGEADGHSIYIRGLPSNATPALLEDEFKKFGPIKSGGVQVRSNKQ-GFCFGFV 367
Query: 215 EFEDMTGVRNAVE 227
EFE + V++A+E
Sbjct: 368 EFEVASAVQSAME 380
>gi|356511786|ref|XP_003524604.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 462
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADT 154
+ +YA+I V K PS + I+ +P + T + A S +D
Sbjct: 234 RRSYAAI--VMKSHVASGHVYVPSRAARIAYAKSSEQLPTTANAKSTPAPEALAPS-SDN 290
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
S V +E E S+Y+RNLP + + ++ E FKKFG + G+ +RS K G C+ FV
Sbjct: 291 ASGSSDVHEEAEGHSIYIRNLPFNATVEQLEEVFKKFGPIKHGGIQVRSSKH-GFCFGFV 349
Query: 215 EFEDMTGVRNAVEVC 229
EFE+++ + +A+E
Sbjct: 350 EFEELSSMHSALEAS 364
>gi|356562630|ref|XP_003549572.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 460
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 135 PTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
PTT + T A S +D+ S V +E E S+Y+RNLP + + ++ E FKKFG +
Sbjct: 270 PTTAKSTPVPEALAPS-SDSAPGSSDVHEEAEGHSIYIRNLPFNATVEQLEEVFKKFGPI 328
Query: 195 SSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
G+ +RS K G C+ FVEFE+++ + +A+E
Sbjct: 329 KHGGIQVRSSKH-GFCFGFVEFEELSSMHSALEAS 362
>gi|284434530|gb|ADB85286.1| putative RNA-binding-like protein [Phyllostachys edulis]
Length = 230
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
SV+V+NLP + + + EEF+K+G + G+ +R+R+ C+ F+EFE ++ A+EV
Sbjct: 164 SVFVKNLPFNATVEMVEEEFRKYGAIKPGGIQVRNRQPDRFCFGFLEFESQQSMQAAIEV 223
Query: 229 CILMW 233
C ++W
Sbjct: 224 CFILW 228
>gi|297790396|ref|XP_002863091.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308909|gb|EFH39350.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 90 VGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEK 149
GE K +YASI+++ + S + P+ + H+P PT E
Sbjct: 237 TGEVPKRSYASIVKMKENAVPMSASRTPTKVEPKKQEEQAIHIPLPTPLSEK-------- 288
Query: 150 SWADTGEEISAVEDEEEIK-----SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
+D+G ++ E+ ++ + S+Y++ LP + + + EF+KFG + + G+ +RS+
Sbjct: 289 --SDSGANVAVNENNQDNERALGPSIYLKGLPLDATPALLETEFQKFGLIRTNGIQVRSQ 346
Query: 205 KDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
K G C+ FVEFE + +++A+E ++ +
Sbjct: 347 K--GFCFGFVEFESASSMQSAIEASPVLLN 374
>gi|224101451|ref|XP_002312286.1| predicted protein [Populus trichocarpa]
gi|222852106|gb|EEE89653.1| predicted protein [Populus trichocarpa]
Length = 454
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 11 LTVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGS 70
+ V +L G +QA+E P+D NG ++P SE +D E+ +
Sbjct: 172 VNVSTNLEEGGVQAKESGHPLD---NG-------------EIPISE---KDIVVEKEVVA 212
Query: 71 LQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVS-DW 129
QN + + + +SV+E + K +YAS++ ++ P Q VS ++ PV +
Sbjct: 213 TQNDAHPVSEAVASSVQE---DAPKKSYASVVNALNLKTQPF---QQRVS-DVKPVKQSY 265
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
VP + +T S + + +AVE S++V NLP + E+ + F
Sbjct: 266 TAVPPMASSHQTGSPRPPGNNIVEINNNSTAVEG----YSIFVANLPMDATVDELIQTFS 321
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
KFG + GV +RS K C+ FVEFE V A+EV +
Sbjct: 322 KFGAIKPNGVQVRSYKQDKNCFGFVEFESANSVEKALEVSTV 363
>gi|118481830|gb|ABK92852.1| unknown [Populus trichocarpa]
Length = 454
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 11 LTVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGS 70
+ V +L G +QA+E P+D NG ++P SE +D E+ +
Sbjct: 172 VNVSTNLEEGGVQAKESGHPLD---NG-------------EIPISE---KDIVVEKEVVA 212
Query: 71 LQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVS-DW 129
QN + + + +SV+E + K +YAS++ ++ P Q VS ++ PV +
Sbjct: 213 TQNDAHPVSEAVASSVQE---DAPKKSYASVVNALNLKTQPF---QQRVS-DVKPVKQSY 265
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
VP + +T S + + +AVE S++V NLP + E+ + F
Sbjct: 266 TAVPPMASSHQTGSPRPPGNNTVEINNNSTAVEG----YSIFVANLPMDATVDELIQTFS 321
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
KFG + GV +RS K C+ FVEFE V A+EV +
Sbjct: 322 KFGAIKPNGVQVRSYKQDKNCFGFVEFESANSVEKALEVSTV 363
>gi|168000116|ref|XP_001752762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695925|gb|EDQ82266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 56/177 (31%)
Query: 93 PQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
P+KH+YASILRV G P TPQ + + + TQ
Sbjct: 371 PKKHSYASILRVI-GTPPPKATPQAPAERPAASATASPAPATAPTQ-------------- 415
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV----- 207
+ EE + VE+E + +SVYV+NLP + + E+ E + +G + GV ++++K
Sbjct: 416 EVQEESAPVENEADGRSVYVKNLPMNTTAPELEEVLRNYGAVKPGGVNVKNQKRGFWNGT 475
Query: 208 ------------------------------------GICYAFVEFEDMTGVRNAVEV 228
G+CYAFVEFE+++G ++A+E
Sbjct: 476 CKGWFRTRGIVGEASGMLLLRCMGGTDDGLVGCMRQGVCYAFVEFEEVSGAQSAIEA 532
>gi|224108876|ref|XP_002315000.1| predicted protein [Populus trichocarpa]
gi|222864040|gb|EEF01171.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 46/250 (18%)
Query: 12 TVPNH---------LMGGEIQAREYVSPVDVKQNGLIDDYSFPE--------QRLQQVPE 54
++PNH L G+ QA+E P+D NG I Y Q Q E
Sbjct: 164 SIPNHSVSANMSTTLEEGDDQAKESGHPLD---NGEIPTYEKEVVVEKVVTTQNDDQAKE 220
Query: 55 SENILEDS--------PAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAK 106
S + L++ E + QN + + + +SV+E + K +YAS+
Sbjct: 221 SGHPLDNGEIPTYEKEVVVEKVVATQNDAHPVSEAVASSVQEE--DAPKKSYASVANALN 278
Query: 107 GQSTPSVTPQPSVSKNISPVS----DWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVE 162
++ P + +SPV VP T Q+T S + ++ EI+
Sbjct: 279 FKTQP-------FQQRVSPVKPVKQSHTAVPPVVTSQQTGS-----RPPSNNSVEINNNS 326
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
E S++V NLP + ++ + F +FG + GV +RS K C+ FVEFE V
Sbjct: 327 AAVEGYSIFVANLPLDATVDQLVQAFTRFGAIKPNGVQVRSYKQEKNCFGFVEFESADSV 386
Query: 223 RNAVEVCILM 232
AVEV +M
Sbjct: 387 EKAVEVSTVM 396
>gi|125559091|gb|EAZ04627.1| hypothetical protein OsI_26774 [Oryza sativa Indica Group]
Length = 569
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E+ SVYV++LP + ++ E+F+KFG + G+ +R R+ G C+ FVEFE +
Sbjct: 316 EQGYSVYVKHLPYECTAKDVEEKFRKFGAIRPGGIQVRHRQPDGFCFGFVEFESRQSMLA 375
Query: 225 AVEV 228
A+E
Sbjct: 376 AIEA 379
>gi|115473223|ref|NP_001060210.1| Os07g0603100 [Oryza sativa Japonica Group]
gi|34394922|dbj|BAC84474.1| putative Ras-GTPase activating protein SH3 domain-binding protein 2
[Oryza sativa Japonica Group]
gi|50509678|dbj|BAD31715.1| putative Ras-GTPase activating protein SH3 domain-binding protein 2
[Oryza sativa Japonica Group]
gi|113611746|dbj|BAF22124.1| Os07g0603100 [Oryza sativa Japonica Group]
gi|125600994|gb|EAZ40570.1| hypothetical protein OsJ_25027 [Oryza sativa Japonica Group]
gi|215715272|dbj|BAG95023.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 569
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E+ SVYV++LP + ++ E+F+KFG + G+ +R R+ G C+ FVEFE +
Sbjct: 316 EQGYSVYVKHLPYECTTKDVEEKFRKFGAIRPGGIQVRHRQPDGFCFGFVEFESRQSMLA 375
Query: 225 AVEV 228
A+E
Sbjct: 376 AIEA 379
>gi|10177355|dbj|BAB10698.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 461
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 7 TPFLLTVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEE 66
TP ++ P + G E A V+PV + + +D+ + + L VPE I + E
Sbjct: 158 TPTIINAPTGMKGSEQAACVSVNPVCKEVSKPLDNENAKDNVL--VPE---IANEVARTE 212
Query: 67 LNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQ-STPSVT-PQPSVSKNIS 124
+ + A ++ ++Y P ++ + + K +YAS+L+V K + P+V+ P P K I
Sbjct: 213 IT-CKEVADDSQKNYDP---DDGLADAPKKSYASVLKVTKDKFGVPAVSLPSP---KKIP 265
Query: 125 PVSDWNHVPQPTTQQ------ETVSSYAYEKSWADT-GEEISAVEDEE------EIKSVY 171
+ P+T Q + SS + +DT E + A E+ E S+Y
Sbjct: 266 KDQEHQAPSDPSTGQILKDQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIY 325
Query: 172 VRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
VR+LP + + + EFK+FG +++ G+ + +++ +G Y FVEFE+ A+E
Sbjct: 326 VRHLPFNANIDMLEAEFKQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEA 382
>gi|297792057|ref|XP_002863913.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309748|gb|EFH40172.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 456
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 95 KHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVP-QPTTQQ------ETVSSYAY 147
K +YA +L+V K +S PS K P + P P+T Q + SS
Sbjct: 232 KKSYAFVLKVTKDKSGVPAGSVPSPKK--IPKDQEHQAPSDPSTGQILKDQGQQASSDPS 289
Query: 148 EKSWADT-GEEISAVEDEE------EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV 200
+ +DT E + A E+ E S+YV++LP + + + EFK+FG +++ G+
Sbjct: 290 QVIESDTVSESVDAAENGHNQEAVAEGTSIYVKHLPFNANIDMLGAEFKQFGAITNGGIQ 349
Query: 201 IRSRKDVGICYAFVEFEDMTGVRNAVEVCILM 232
+ +++ +G Y FVEFE+ A+E LM
Sbjct: 350 VINQRGLGYPYGFVEFEEADAAHRAIEASPLM 381
>gi|293333358|ref|NP_001168649.1| uncharacterized protein LOC100382436 [Zea mays]
gi|223949919|gb|ACN29043.1| unknown [Zea mays]
gi|413955470|gb|AFW88119.1| hypothetical protein ZEAMMB73_005917 [Zea mays]
gi|413955471|gb|AFW88120.1| hypothetical protein ZEAMMB73_005917 [Zea mays]
gi|413955472|gb|AFW88121.1| hypothetical protein ZEAMMB73_005917 [Zea mays]
Length = 584
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 95 KHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSDWNHVPQP-TTQQETVSSYAYEKSWA 152
K +YASI++V K G TP V K S VS P+P +T E + + + + A
Sbjct: 239 KKSYASIVKVMKEGPPTPVV-------KTTSSVSKQKPAPKPVSTAVEGLEKPSEKPTQA 291
Query: 153 -DTGEEISAVED---EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
TG+ I A + E+ S++++NLP + + EEFKKFG + GV +R K
Sbjct: 292 IGTGDGIVAQNNSSRNEQGYSIFIKNLPFHANIEMVEEEFKKFGTIKPGGVQVRHNKVDR 351
Query: 209 ICYAFVEFEDMTGVRNAVEVC 229
+ FVE+E ++ A+E
Sbjct: 352 FGFGFVEYESQQSMQAAIEAS 372
>gi|413955473|gb|AFW88122.1| hypothetical protein ZEAMMB73_005917 [Zea mays]
Length = 529
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 95 KHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSDWNHVPQP-TTQQETVSSYAYEKSWA 152
K +YASI++V K G TP V K S VS P+P +T E + + + + A
Sbjct: 184 KKSYASIVKVMKEGPPTPVV-------KTTSSVSKQKPAPKPVSTAVEGLEKPSEKPTQA 236
Query: 153 -DTGEEISAVED---EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
TG+ I A + E+ S++++NLP + + EEFKKFG + GV +R K
Sbjct: 237 IGTGDGIVAQNNSSRNEQGYSIFIKNLPFHANIEMVEEEFKKFGTIKPGGVQVRHNKVDR 296
Query: 209 ICYAFVEFEDMTGVRNAVEVC 229
+ FVE+E ++ A+E
Sbjct: 297 FGFGFVEYESQQSMQAAIEAS 317
>gi|356577025|ref|XP_003556630.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
Length = 465
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++V NLP + + ++ FKKFG + +G+ +RS K C+ FVEFE T +++A+E
Sbjct: 298 AIFVANLPMNATVEQLERAFKKFGPIKQDGIQVRSNKQQQSCFGFVEFESATSMQSALEA 357
Query: 229 C 229
Sbjct: 358 S 358
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D +VYV+NLP S++++ EF FG ++S +V+R + C+ FV FE
Sbjct: 236 DANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITS-AIVMRDANGLSRCFGFVNFEKSECA 294
Query: 223 RNAVE 227
RNAV+
Sbjct: 295 RNAVK 299
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D +VYV+NLP S++++ EF FG ++S +V+R + C+ FV FE
Sbjct: 235 DANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITS-AIVMRDANGLSRCFGFVNFEKSECA 293
Query: 223 RNAVE 227
RNAV+
Sbjct: 294 RNAVK 298
>gi|30695510|ref|NP_199676.2| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|27754467|gb|AAO22681.1| putative NTF2-containing RNA-binding protein [Arabidopsis thaliana]
gi|28973471|gb|AAO64060.1| putative NTF2-containing RNA-binding protein [Arabidopsis thaliana]
gi|332008319|gb|AED95702.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 458
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 74 AVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQ-STPSVT-PQPSVSKNISPVSDWNH 131
A ++ ++Y P ++ + + K +YAS+L+V K + P+V+ P P K I +
Sbjct: 216 ADDSQKNYDP---DDGLADAPKKSYASVLKVTKDKFGVPAVSLPSP---KKIPKDQEHQA 269
Query: 132 VPQPTTQQ------ETVSSYAYEKSWADT-GEEISAVEDEE------EIKSVYVRNLPPS 178
P+T Q + SS + +DT E + A E+ E S+YVR+LP +
Sbjct: 270 PSDPSTGQILKDQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFN 329
Query: 179 VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+ + EFK+FG +++ G+ + +++ +G Y FVEFE+ A+E
Sbjct: 330 ANIDMLEAEFKQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEA 379
>gi|255542010|ref|XP_002512069.1| RNA binding protein, putative [Ricinus communis]
gi|223549249|gb|EEF50738.1| RNA binding protein, putative [Ricinus communis]
Length = 493
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S++V NLP + + ++ E F+KFG + GV +RS K C+ FVEFE +++A+EV
Sbjct: 311 SIFVANLPMNATVEQLKETFEKFGPIKPNGVQVRSYKQEKNCFGFVEFESANSMQSALEV 370
Query: 229 CIL 231
+
Sbjct: 371 SSI 373
>gi|414887495|tpg|DAA63509.1| TPA: hypothetical protein ZEAMMB73_244049 [Zea mays]
Length = 500
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 29/182 (15%)
Query: 62 SPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPS--- 118
+P E+ +L+ V A A VE+ E + TYAS++++ + + P+ +PS
Sbjct: 292 APVEKGAPALRAPVEKADPAPRAPVEK---EVTRKTYASVVKIPREDTQPAPAARPSKPN 348
Query: 119 --------VSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSV 170
KN+S S H TV++ +K +E S+
Sbjct: 349 LNIKMVQNTEKNVSSPSKPAHA--------TVNALPGDKGVPKNKSP------DEPGYSI 394
Query: 171 YVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCI 230
+V+NLP + + +EF KFG + S GV ++ + D C+ FVEFE + A+E+ +
Sbjct: 395 FVKNLPFEATVEMVEQEFSKFGAIKSGGVQVKCQPD-QFCFGFVEFESQQSMLAAIELLM 453
Query: 231 LM 232
++
Sbjct: 454 VL 455
>gi|388509658|gb|AFK42895.1| unknown [Medicago truncatula]
Length = 468
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E+ +++V NLP S + ++ FKKFG + +G+ +RS K G C+ FVEFE
Sbjct: 308 ENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK--GSCFGFVEFESAAS 365
Query: 222 VRNAVEVC 229
+++A+E
Sbjct: 366 MQSALEAS 373
>gi|357475049|ref|XP_003607810.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
gi|355508865|gb|AES90007.1| Ras GTPase-activating protein-binding protein [Medicago truncatula]
Length = 455
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E+ +++V NLP S + ++ FKKFG + +G+ +RS K G C+ FVEFE
Sbjct: 295 ENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK--GSCFGFVEFESAAS 352
Query: 222 VRNAVEVC 229
+++A+E
Sbjct: 353 MQSALEAS 360
>gi|357116440|ref|XP_003559989.1| PREDICTED: putative G3BP-like protein-like [Brachypodium
distachyon]
Length = 591
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
+++ SV+V+NLP + + +A EFKKFG + G+ + ++ G C+ F+EFE +
Sbjct: 317 DDQGYSVFVKNLPFNATVEMVASEFKKFGAIKPRGIQVIHKQFDGFCFGFIEFEFQESMH 376
Query: 224 NAVEVCILMW 233
A+E L +
Sbjct: 377 AAIEASPLRF 386
>gi|326531236|dbj|BAK04969.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 543
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 95 KHTYASILRVAK-----GQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEK 149
K TYASI++V K P +P+P+ PV+ + + + S E
Sbjct: 258 KKTYASIVKVMKEAPPTPVVKPKPSPKPATK----PVT---KAVEGSEKSSVKPSQTAET 310
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+ A T + +E+ SV+++ LP + + + EEFKKFG + G+ +R+ K
Sbjct: 311 TPAGTSVAKNKTSHDEQGYSVFIKGLPYNSTVQMVEEEFKKFGTIKPSGIQVRNNKIDQY 370
Query: 210 CYAFVEFEDMTGVRNAVEVCIL 231
C+ FVEFE ++ A++ L
Sbjct: 371 CFGFVEFESEQSMQAAIQASPL 392
>gi|225423458|ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Vitis vinifera]
Length = 486
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Query: 95 KHTYASILRVAKGQ-STPSVTPQPSVSK------NISPVSDWNHVPQPTTQQETV--SSY 145
K +YASI++V KG+ +T SV P + +SP + HV + V S+
Sbjct: 235 KKSYASIVKVMKGEMATSSVHVPPGAVRAAKSNAKVSPANIERHVSTSAAPRAQVHSSNS 294
Query: 146 AYEKSWADTGEEISAV-------------------EDEEEI--KSVYVRNLPPSVSESEI 184
A + A +G + +D E+ S+Y+ NLP + + ++
Sbjct: 295 APSGNSAPSGNNAPSSNSTPTNNGAPRSNISPESGQDHPEVGGHSIYIGNLPLNATVQQV 354
Query: 185 AEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
FKKFG + S G+ IRS K G + FVEFE + + +A++
Sbjct: 355 EGVFKKFGPIISGGIQIRSYKQQGYGFGFVEFESLDSMHSAIKA 398
>gi|326532916|dbj|BAJ89303.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 95 KHTYASILRVAK-----GQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEK 149
K TYASI++V K P +P+P+ PV+ + + + S E
Sbjct: 129 KKTYASIVKVMKEAPPTPVVKPKPSPKPATK----PVT---KAVEGSEKSSVKPSQTAET 181
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+ A T + +E+ SV+++ LP + + + EEFKKFG + G+ +R+ K
Sbjct: 182 TPAGTSVAKNKTSHDEQGYSVFIKGLPYNSTVQMVEEEFKKFGTIKPSGIQVRNNKIDQY 241
Query: 210 CYAFVEFEDMTGVRNAVEVCIL 231
C+ FVEFE ++ A++ L
Sbjct: 242 CFGFVEFESEQSMQAAIQASPL 263
>gi|242040583|ref|XP_002467686.1| hypothetical protein SORBIDRAFT_01g032380 [Sorghum bicolor]
gi|241921540|gb|EER94684.1| hypothetical protein SORBIDRAFT_01g032380 [Sorghum bicolor]
Length = 620
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 95 KHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ-ETVSSYAYEKSWA 152
K +YASI++V K G TP V +K S V P+P ++ E + + + A
Sbjct: 239 KKSYASIVKVMKEGPLTPPV------AKTTSSVPKQKPAPKPVSKAVEGPEKPSVKPTQA 292
Query: 153 -DTGEEISAVED---EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
+TG+ I A + E+ S++V+NLP + + EEFKKFG + GV +R K
Sbjct: 293 IETGDGIVAENNSSRNEQGYSIFVKNLPYHANIEMVEEEFKKFGTIKPGGVQVRHNKVDR 352
Query: 209 ICYAFVEFEDMTGVRNAVEVC 229
+ FVE+E ++ A+E
Sbjct: 353 YVFGFVEYESQQSMQAAIEAS 373
>gi|84468454|dbj|BAE71310.1| putative ras-GTPase-activating protein SH3-domain binding protein
[Trifolium pratense]
Length = 447
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E+ +++V NLP + + ++ FKKFG + +G+ +RS K G C+ FVEFE
Sbjct: 289 ENGGRAHAIFVANLPMTATVEQLDRVFKKFGTIKRDGIQVRSNK--GSCFGFVEFESAAS 346
Query: 222 VRNAVEVC 229
+++A+E
Sbjct: 347 LQSALEAS 354
>gi|84468278|dbj|BAE71222.1| putative ras-GTPase-activating protein SH3-domain binding protein
[Trifolium pratense]
Length = 447
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E+ +++V NLP + + ++ FKKFG + +G+ +RS K G C+ FVEFE
Sbjct: 289 ENGGRAHAIFVANLPMTATVEQLDRVFKKFGTIKRDGIQVRSNK--GSCFGFVEFESAAS 346
Query: 222 VRNAVEVC 229
+++A+E
Sbjct: 347 LQSALEAS 354
>gi|226505868|ref|NP_001151091.1| LOC100284724 [Zea mays]
gi|195644222|gb|ACG41579.1| RNA-binding protein-like [Zea mays]
Length = 586
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 62 SPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSK 121
+P E+ +L+ V A A VE+ V + TYAS++++ + + P+ +PS
Sbjct: 292 APVEKGAPALRAPVEKADPAPRAPVEKEV---TRKTYASVVKIPREDTQPAPAARPSKPN 348
Query: 122 -NISPVSDW-NHVPQPTT-QQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPS 178
NI V + +V P+ TV++ D G + DE S++V+NLP
Sbjct: 349 LNIKMVQNTEKNVSSPSKPAHATVNALP-----GDKGVPKNKSPDEPGY-SIFVKNLPFE 402
Query: 179 VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMW 233
+ + +EF KFG + S GV ++ + D C+ FVEFE + A+E + +
Sbjct: 403 ATVEMVEQEFSKFGAIKSGGVQVKCQPD-QFCFGFVEFESQQSMLAAIEASRVYF 456
>gi|194704878|gb|ACF86523.1| unknown [Zea mays]
gi|223946681|gb|ACN27424.1| unknown [Zea mays]
gi|414887496|tpg|DAA63510.1| TPA: RNA-binding protein-like protein [Zea mays]
Length = 586
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 62 SPAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSK 121
+P E+ +L+ V A A VE+ V + TYAS++++ + + P+ +PS
Sbjct: 292 APVEKGAPALRAPVEKADPAPRAPVEKEV---TRKTYASVVKIPREDTQPAPAARPSKPN 348
Query: 122 -NISPVSDW-NHVPQPTT-QQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPS 178
NI V + +V P+ TV++ D G + DE S++V+NLP
Sbjct: 349 LNIKMVQNTEKNVSSPSKPAHATVNALP-----GDKGVPKNKSPDEPGY-SIFVKNLPFE 402
Query: 179 VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMW 233
+ + +EF KFG + S GV ++ + D C+ FVEFE + A+E + +
Sbjct: 403 ATVEMVEQEFSKFGAIKSGGVQVKCQPD-QFCFGFVEFESQQSMLAAIEASRVYF 456
>gi|356521632|ref|XP_003529458.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
[Glycine max]
Length = 454
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++V NLP + + ++ F+KFG + +G+ +RS K C+ FVEFE T +++A+E
Sbjct: 295 AIFVANLPMNATVEQLERVFQKFGPIKRDGIQVRSNKQQQSCFGFVEFESATSMQSALEA 354
>gi|147854968|emb|CAN80261.1| hypothetical protein VITISV_043950 [Vitis vinifera]
Length = 1124
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 16/139 (11%)
Query: 70 SLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDW 129
S +N ++ D PA+ E+ P+K +YASI++V KG +T TP + S
Sbjct: 264 SSENEISTVVDSAPAAQEDA---PKK-SYASIVKVMKGSATS--TP-------VFAXSXV 310
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVED---EEEIKSVYVRNLPPSVSESEIAE 186
P Q S+ + A T SA E EE S+YVR+LP S + ++ E
Sbjct: 311 RAAPANIDQXLAGSAKSAXAPEAXTPTSDSAPESSNINEEGFSIYVRHLPLSATVPQLEE 370
Query: 187 EFKKFGELSSEGVVIRSRK 205
EFKKFG + +G+ +RS K
Sbjct: 371 EFKKFGPIKQDGIQVRSNK 389
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D +VYV+NLP S++++ EF FG ++S +V+R + C+ FV FE
Sbjct: 259 DANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITS-AIVMRDANGLSRCFGFVNFEKSECA 317
Query: 223 RNAVE 227
RNAV+
Sbjct: 318 RNAVK 322
>gi|297844274|ref|XP_002890018.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335860|gb|EFH66277.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 438
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 95 KHTYASILR-VAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWAD 153
K +YA I++ +A+ +T +V P+ K+ PV+ + P+ K+ A
Sbjct: 220 KKSYAGIVQSLAQNGATFNVKGSPAKPKS-KPVTKPSAAPE-------------SKAPAP 265
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
E SA ++ +++V NLP + ++ E FK FG ++ +G+ +RS + G C+ F
Sbjct: 266 VSEHSSAETVDQPGCTIFVANLPMDATPEQLNETFKGFGSITKDGIQVRSYRLKGNCFGF 325
Query: 214 VEFEDMTGVR 223
V FE V+
Sbjct: 326 VTFESAEAVK 335
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+VYV NLP V E EI + F K+GE+ + I+SR +AF++F+D + AV
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEI--RNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRA 62
Query: 229 C 229
C
Sbjct: 63 C 63
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+VYV+NLP + E E+ + F KFG +SS VV+R + C+ FV FE +A
Sbjct: 227 RFTNVYVKNLPKEIGEDELRKTFGKFGVISS-AVVMRDQSGNSRCFGFVNFECTEAAASA 285
Query: 226 VE 227
VE
Sbjct: 286 VE 287
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+VYV+NLP + E E+ + F KFG +SS VV+R + C+ FV FE +A
Sbjct: 227 RFTNVYVKNLPKEIGEDELRKTFGKFGVISS-AVVMRDQSGNSRCFGFVNFECTEAAASA 285
Query: 226 VE 227
VE
Sbjct: 286 VE 287
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+VYV+NLP + E E+ + F KFG +SS VV+R + C+ FV FE +A
Sbjct: 227 RFTNVYVKNLPKEIGEDELRKTFGKFGVISS-AVVMRDQSGNSRCFGFVNFECTEAAASA 285
Query: 226 VE 227
VE
Sbjct: 286 VE 287
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+YV NLPP ++E E+ ++F KFG + + + +SR+ CYA++EF+ + V +A++
Sbjct: 8 IYVANLPPDITEHELDDKFYKFGRI-RQITIKQSRRRDDECYAYIEFDSSSSVDDAIK 64
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+VYV+NLP + E E+ + F KFG +SS VV+R + C+ FV FE +A
Sbjct: 227 RFTNVYVKNLPKEIGEDELRKTFGKFGVISS-AVVMRDQSGNSRCFGFVNFECTEAAASA 285
Query: 226 VE 227
VE
Sbjct: 286 VE 287
>gi|428169258|gb|EKX38194.1| hypothetical protein GUITHDRAFT_77389, partial [Guillardia theta
CCMP2712]
Length = 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
AV + V+V N+ P E E+ E FKKFG+ +V+RS + + + Y F+EF D
Sbjct: 2 AVAKAPPLHQVFVGNIHPDTKEEEVIELFKKFGK-PDRSIVMRSAEGISLGYGFLEFSDA 60
Query: 220 TGVRNAVE 227
+ R AVE
Sbjct: 61 SQARKAVE 68
>gi|357113956|ref|XP_003558767.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 345
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI--CYAFVEFEDMTGVR 223
E++ +YV LPPS E E+ E F ++GE+ VV +D G +AFVEF D G R
Sbjct: 4 EMRKLYVGGLPPSAHEEELKEHFARYGEVLCARVV--RHRDTGYPRGFAFVEFADDEGPR 61
Query: 224 NAVE 227
A+E
Sbjct: 62 AALE 65
>gi|297738096|emb|CBI27297.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 95 KHTYASILRVAKGQ-STPSVTPQPSVSK------NISPVSDWNHVPQPTTQQETV--SSY 145
K +YASI++V KG+ +T SV P + +SP + HV + V S+
Sbjct: 235 KKSYASIVKVMKGEMATSSVHVPPGAVRAAKSNAKVSPANIERHVSTSAAPRAQVHSSNS 294
Query: 146 AYEKSWADTGEEISAV-------------------EDEEEI--KSVYVRNLPPSVSESEI 184
A + A +G + +D E+ S+Y+ NLP + + ++
Sbjct: 295 APSGNSAPSGNNAPSSNSTPTNNGAPRSNISPESGQDHPEVGGHSIYIGNLPLNATVQQV 354
Query: 185 AEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
FKKFG + S G+ IRS K G + FVEFE + + +A++
Sbjct: 355 EGVFKKFGPIISGGIQIRSYK--GYGFGFVEFESLDSMHSAIKA 396
>gi|145528476|ref|XP_001450032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417632|emb|CAK82635.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 132 VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKF 191
V +P QQ+ S +K D ++ ++ + S++VRNL + +E ++ E FK
Sbjct: 10 VQEPVEQQKEDESQ--KKGGTDNKHQLKDID----LTSIFVRNLDENTTEDDLKEYFKDC 63
Query: 192 GELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
G + V +RS K+ G Y++++F+D + V +A+
Sbjct: 64 GNIVK--VTLRSDKNTGTLYSYIQFQDQSSVEDAL 96
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
E + +VY++NLP S+ ++ +EF FGE++S VV+R V C+ FV FE
Sbjct: 207 EVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITS-AVVMRDVNGVSKCFGFVNFE 259
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 152 ADTGEEISAVEDEEE-IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
A+ G++ +D E+ S+YV +L PSV+ES++ E F K G++SS V + +C
Sbjct: 43 AENGKDTKDSKDNEQTFASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLC 102
Query: 211 YAFVEFEDMTGVRNAVEV----------CILMW 233
YA+V ++ +A++ C +MW
Sbjct: 103 YAYVNYQKREEAEHALDTLAFCDIKGKQCRIMW 135
>gi|168001048|ref|XP_001753227.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695513|gb|EDQ81856.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 170
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 179 VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILM 232
++ SE+ +E FG + GV ++S+K G+CYAFVEFED T + A+E +
Sbjct: 3 ITPSELEKELASFGRVLPNGVNVKSQKQ-GVCYAFVEFEDTTAAQTAIEASPIQ 55
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
G + + E + +VY++NLP SE ++ +EF FGE++S VV+R C+ FV
Sbjct: 196 GLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITS-AVVMRDADGASKCFGFV 254
Query: 215 EFE 217
F+
Sbjct: 255 NFK 257
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSSA--SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|168000126|ref|XP_001752767.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695930|gb|EDQ82271.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 666
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 56/176 (31%)
Query: 93 PQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
P+KH+YASILRV G P PQ + + + +Q
Sbjct: 253 PKKHSYASILRVI-GTPPPKAAPQAPAERPAASATASPAPATAPSQ-------------- 297
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV----- 207
+ EE + VE+E + +SVYV+NLP + + E+ E + +G + GV ++++K
Sbjct: 298 EVQEESAPVENEADGRSVYVKNLPMNTTAPELEEVLRNYGAVKPGGVNVKNQKRGFWNGT 357
Query: 208 ------------------------------------GICYAFVEFEDMTGVRNAVE 227
G+CYAFVEFE+++G ++A+E
Sbjct: 358 CKGWFRTRGIVGEASGMLLLRCMGGTDDGLVGCMRQGVCYAFVEFEEVSGAQSAIE 413
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L PSVSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A+E +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMW 113
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E + + +E+ ++YV+NL SV E E++E F KFGE+ + VV+R + F+
Sbjct: 182 ERLKILSNEDSFTNIYVKNLDASVDEKELSEVFSKFGEIQN-AVVMRGENGASKEFGFIN 240
Query: 216 FEDMTGVRNAVE 227
F D A++
Sbjct: 241 FADHASALIAID 252
>gi|224031149|gb|ACN34650.1| unknown [Zea mays]
Length = 585
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S++V+NLP + + +EF KFG + S GV ++ + D C+ FVEFE + A+E
Sbjct: 392 SIFVKNLPFEATVEMVEQEFSKFGAIKSGGVQVKCQPD-QFCFGFVEFESQQSMLAAIEA 450
Query: 229 CILMW 233
+ +
Sbjct: 451 SRVYF 455
>gi|297603034|ref|NP_001053287.2| Os04g0510500 [Oryza sativa Japonica Group]
gi|255675615|dbj|BAF15201.2| Os04g0510500 [Oryza sativa Japonica Group]
Length = 283
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 18 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQR--LQQVPESENIL--EDSPAEELNGSLQN 73
M E++A+E ++P D+++ G PE QQ P ++ +DSP+EEL S +
Sbjct: 102 MPEELEAKEALAPADIEERG---PAFMPENHEVQQQDPLEYGVVIDDDSPSEELTPSFPS 158
Query: 74 AVNAAQDYLPASV---------EEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNIS 124
+ ++ QD + EEP+GEP K TYAS+LR S ++ P S
Sbjct: 159 STDSKQDAPLGPIVHPSVTTPEEEPMGEPAKQTYASVLRTKGHPSHQAIHSIPLNKATAS 218
Query: 125 PV-SDWN-HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDE 164
V S N H+ T Q + V +EK+ DT + S EDE
Sbjct: 219 SVESQLNGHM---TKQVQPV----HEKANLDTRYDASGPEDE 253
>gi|307102631|gb|EFN50901.1| hypothetical protein CHLNCDRAFT_141731 [Chlorella variabilis]
Length = 500
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+E+ I S++VR +P SV+ ++ ++ +++G L GV+++++K +AF++FED
Sbjct: 347 EEQPIASIFVRGIPASVTMGQLMQKLEQYGRLRPGGVILKTQKGRD-SFAFIDFED 401
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
A E + +V+V+NL P ++E EI E F FG +++ V+++ D + FV F+D
Sbjct: 208 AATGETKFTNVFVKNLDPEMAEEEIKEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDP 266
Query: 220 TGVRNAVEVC 229
R AVE
Sbjct: 267 EAARAAVETM 276
>gi|346703256|emb|CBX25354.1| hypothetical_protein [Oryza brachyantha]
Length = 503
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWAD SA ++KSVYV+NLP +V+++++ F++ GE+ ++ V+ SR
Sbjct: 274 SWADPKNNDSA--STSQVKSVYVKNLPKNVTQAQLKNLFERHGEI-TKVVLPPSRGGHDN 330
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F+D + A++
Sbjct: 331 RYGFVHFKDRSMAMRALQ 348
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
G + + E + +VY++NLP SE ++ +EF FGE++S VV+R C+ F
Sbjct: 162 VGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITS-AVVMRDADGASKCFGF 220
Query: 214 VEFE 217
V F+
Sbjct: 221 VNFK 224
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 23/125 (18%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQET------VSSYAYEKSWAD--TGEEISAVEDEEEIK 168
P ++ V +NH ++E + + A SWAD +G ++SA+ ++K
Sbjct: 244 PGRNRGFGFVEYYNHACAEHARREMSKSSFRLGTNAPTISWADPRSGPDVSAMS---QVK 300
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI------RSRKDVGICYAFVEFEDMTGV 222
VYVRNLP SV+E ++ + F++ GE+ VV+ ++++D G FV F D
Sbjct: 301 VVYVRNLPDSVTEEQLQKLFERHGEIVK--VVLPATKPGQAKRDFG----FVHFSDRAQA 354
Query: 223 RNAVE 227
A+E
Sbjct: 355 LKAIE 359
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 110 TPSVTPQPSVSKNISPVSDWNHVPQPTT-QQETVS---SYAYEKSWADTGEEISAVEDEE 165
TP+V PQP+ H PQPT + + VS + +S +G S+ + E
Sbjct: 34 TPAV-PQPAT-----------HAPQPTNPKMQRVSPADDHQSMQSSQSSGTLDSSADTPE 81
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
++ + LPPSV+ES++ E FK FG + + ++ + Y FVEFE
Sbjct: 82 PRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFE 133
>gi|115487230|ref|NP_001066102.1| Os12g0136200 [Oryza sativa Japonica Group]
gi|113648609|dbj|BAF29121.1| Os12g0136200, partial [Oryza sativa Japonica Group]
Length = 515
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 252 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 309
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 310 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 353
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 122 NISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISA-VEDEEEIKSVYVRNLPPSVS 180
N SP +PTT VS+ +K A + + I A V+ E +++RNLP +
Sbjct: 243 NASPPVSHRIQHEPTTDHSDVSAEKEDKDPAGSTDAIDANVKLIRETGRLFIRNLPYDTT 302
Query: 181 ESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
E ++ EF +FG+L V SR +A+ +F D
Sbjct: 303 EEDLQSEFARFGKLEELHVAFDSRHSTSKGFAYAQFFD 340
>gi|346703741|emb|CBX24409.1| hypothetical_protein [Oryza glaberrima]
Length = 502
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 239 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 296
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 297 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 340
>gi|108862165|gb|ABA95754.2| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108862166|gb|ABG21876.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 502
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 239 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 296
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 297 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 340
>gi|357119650|ref|XP_003561548.1| PREDICTED: putative G3BP-like protein-like [Brachypodium
distachyon]
Length = 546
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S++++ LP + + + EEFK+FG + G+ +R+ K C+ FVEFE ++ A++
Sbjct: 346 SIFIKGLPFNSAVEMVEEEFKRFGGIKPGGIQVRNNKFDRFCFGFVEFESQQSMQAAIKA 405
Query: 229 C 229
Sbjct: 406 S 406
>gi|29371361|gb|AAO72701.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 476
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 251 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 308
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 309 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 352
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 162 EDEEEIKS------VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+D E + S VYV+NL +V++ E+ E F K+G ++S VV+R C+ FV
Sbjct: 202 QDRENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITS-AVVMRDSDGKSRCFGFVN 260
Query: 216 FEDMTGVRNAVE 227
FE+ AV+
Sbjct: 261 FENADAAAQAVQ 272
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E + D+ + +V+V+NL S ++ E+ F +FG ++S VV+R C+ FV
Sbjct: 198 QERESAADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITS-AVVMRDGDGKSKCFGFVN 256
Query: 216 FEDMTGVRNAVEVC 229
FE+ AVE
Sbjct: 257 FENADDAARAVEAL 270
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 162 EDEEEIKS------VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+D E + S VYV+NL +V++ E+ E F K+G ++S VV+R C+ FV
Sbjct: 202 QDRENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITS-AVVMRDSDGKSRCFGFVN 260
Query: 216 FEDMTGVRNAVE 227
FE+ AV+
Sbjct: 261 FENADAAAQAVQ 272
>gi|125535710|gb|EAY82198.1| hypothetical protein OsI_37401 [Oryza sativa Indica Group]
Length = 783
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 239 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 296
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 297 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 340
>gi|222616602|gb|EEE52734.1| hypothetical protein OsJ_35153 [Oryza sativa Japonica Group]
Length = 558
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 239 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 296
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 297 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 340
>gi|346703354|emb|CBX25451.1| hypothetical_protein [Oryza glaberrima]
Length = 558
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA + +KSVYV+NLP +V+++
Sbjct: 294 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA-STSQVVKSVYVKNLPKNVTQA 352
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 353 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 396
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 162 EDEEEIKS------VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+D E + S VYV+NL +V++ E+ E F K+G ++S VV+R C+ FV
Sbjct: 202 QDRENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITS-AVVMRDSDGKSRCFGFVN 260
Query: 216 FEDMTGVRNAVE 227
FE+ AV+
Sbjct: 261 FENADAAAQAVQ 272
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
A E + +V+V+NL P ++E EI E F FG +++ V+++ D + FV F+D
Sbjct: 207 AATGETKFTNVFVKNLDPEMAEEEINEHFSTFGVITNV-VIMKDENDKSKGFGFVNFDDP 265
Query: 220 TGVRNAVE 227
R AVE
Sbjct: 266 EAARAAVE 273
>gi|145495181|ref|XP_001433584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400702|emb|CAK66187.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 132 VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKF 191
V +P QQ+ S +K D ++ ++ + S++VRNL + +E ++ E FK
Sbjct: 10 VQEPVDQQKEDESQ--KKGGTDNKHQLKDID----LSSIFVRNLDENTTEDDLKEYFKDC 63
Query: 192 GELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
G + V +RS K+ G Y++V+F++ V +A+
Sbjct: 64 GTIVK--VTLRSDKNTGTLYSYVQFQEQGSVEDAL 96
>gi|125533325|gb|EAY79873.1| hypothetical protein OsI_35035 [Oryza sativa Indica Group]
Length = 1181
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD SA ++KSVYV+NLP +V+++
Sbjct: 648 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSA--STSQVKSVYVKNLPKNVTQA 705
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 706 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 749
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
++ A TG E +VE+ S+YV +L P+VSE+ + + F G +SS V +
Sbjct: 20 DQKQAATGSESQSVENSS--ASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 208 GICYAFVEFEDMTGVRNAVE----------VCILMW 233
+ YA+V F D R A++ +C +MW
Sbjct: 78 SLGYAYVNFNDHEAGRKAIDQLNYTPIKGRLCRIMW 113
>gi|6642641|gb|AAF20222.1|AC012395_9 putative RNA-binding protein [Arabidopsis thaliana]
Length = 369
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++ V+NLP + + + + FK+FGE+ GV +R+++ Y FVEF++ + A++
Sbjct: 152 AICVKNLPLNATIALVENAFKQFGEIRRGGVEVRNKRS--FSYGFVEFKEENAAQRAIKN 209
Query: 229 CILMW 233
C++ +
Sbjct: 210 CLIGF 214
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 149 KSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
K + + G + E +V+V+NLPP+V+ + FK+FG + GV + S + VG
Sbjct: 267 KDYGNKGGNENNQEPRALYAAVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQV-SNRGVG 325
Query: 209 ICYAFVEF 216
+ V+F
Sbjct: 326 NWFGNVKF 333
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D E+ ++Y++NL + +E ++ +F FG + S V+++ +D+G +AFV FED
Sbjct: 184 DPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQS-AVLMKDPRDIGRQFAFVNFEDHEAA 242
Query: 223 RNAVE 227
A E
Sbjct: 243 HRATE 247
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE + D+ + +VYV+NL + ++ E+ F ++G +SS VV+R C+ FV
Sbjct: 213 EERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSA-VVMRDGDGKSRCFGFVN 271
Query: 216 FEDMTGVRNAVEV 228
FE+ AVE
Sbjct: 272 FENPEDAARAVEA 284
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE + D+ + +VYV+NL + ++ E+ F ++G +SS VV+R C+ FV
Sbjct: 213 EERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSA-VVMRDGDGKSRCFGFVN 271
Query: 216 FEDMTGVRNAVEV 228
FE+ AVE
Sbjct: 272 FENPEDAARAVEA 284
>gi|346703160|emb|CBX25259.1| hypothetical_protein [Oryza brachyantha]
Length = 455
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWAD SA ++KSVYV+NLP +V+++E+ + F+ G++ ++ V+ SR
Sbjct: 246 SWADPKNNDSA--STSQVKSVYVKNLPKNVTQAELKKLFEHHGDI-TKVVLPPSRGGHDN 302
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F+D + A++
Sbjct: 303 RYGFVHFKDRSMAMRALQ 320
>gi|403216662|emb|CCK71158.1| hypothetical protein KNAG_0G01000 [Kazachstania naganishii CBS
8797]
Length = 131
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 135 PTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
P T Q +S++A + + ++ E + +S++VR L P I + FK G +
Sbjct: 13 PDTLQFKISNFATANN-----QSLAIQRAEADTRSIFVRGLSPETGPEVIEDHFKACGPI 67
Query: 195 SSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S + + RK I YA++EFE + G NA+++
Sbjct: 68 SRITLFSQKRKRNTIGYAYIEFEAVQGRANALDL 101
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E + D + +V+V+NL S ++ E+ + F +FG ++S VV+R C+ FV
Sbjct: 201 QERESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFGTITS-AVVMRDGDGKSKCFGFVN 259
Query: 216 FEDMTGVRNAVEVC 229
FE AVE
Sbjct: 260 FESTDDAARAVEAL 273
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E + D+ + +V+V+NL S ++ E+ F +FG ++S VV+R C+ FV
Sbjct: 195 QERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITS-AVVMRDGDGKSKCFGFVN 253
Query: 216 FEDMTGVRNAVEVC 229
FE+ AVE
Sbjct: 254 FENADDAARAVEAL 267
>gi|297833506|ref|XP_002884635.1| hypothetical protein ARALYDRAFT_896883 [Arabidopsis lyrata subsp.
lyrata]
gi|297330475|gb|EFH60894.1| hypothetical protein ARALYDRAFT_896883 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++ V+ LPP + + + + FK+FGE+ GV +R ++ Y FVEF++ + + A
Sbjct: 566 EGAAICVKKLPPDATITLVEDAFKQFGEIRRGGVEVRHKR--SFSYGFVEFKEESAAQAA 623
Query: 226 VEVCILMW 233
+E +M+
Sbjct: 624 IEASPVMF 631
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+Y+ LP + + + FK+FG++ GV +RS+K YA+VEFE+ A+
Sbjct: 214 IYLHWLPTKTTVALVENAFKQFGKIRRGGVELRSKKRYKGKYAYVEFEEAEAANRAI 270
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+VYV NLP +V E EI + F K+GE+ + I+SR +AF++F+D + AV
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEI--RNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRA 62
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E V D+ + +V+V+NL + +E ++ + F +FG L+S VV+R C+ FV
Sbjct: 196 QERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSI-VVMRDADGKSRCFGFVN 254
Query: 216 FEDMTGVRNAVEVC 229
FE+ AV+
Sbjct: 255 FENADDAARAVDTL 268
>gi|297838689|ref|XP_002887226.1| hypothetical protein ARALYDRAFT_894705 [Arabidopsis lyrata subsp.
lyrata]
gi|297333067|gb|EFH63485.1| hypothetical protein ARALYDRAFT_894705 [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 124 SPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESE 183
+PV ++ QP KS ++I EE KS++V NLP + +
Sbjct: 240 APVQQPKYMGQPRAAAAPKKPAYVSKSIKKNDQKII----EEPGKSIFVANLPLNAMPPQ 295
Query: 184 IAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRNAVEVC 229
+ E FK FG + G+ +RS + +C+ F+ FE V++ ++
Sbjct: 296 LYELFKDFGPIKENGIQVRSSRGNANPVCFGFIAFESAASVQSVLQAT 343
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+VYV NLP V E EI + F K+GE+ + I+SR +AF++F+D + AV
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEI--RNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRA 62
>gi|297611204|ref|NP_001065705.2| Os11g0139500 [Oryza sativa Japonica Group]
gi|108863976|gb|ABG22354.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215767918|dbj|BAH00147.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679771|dbj|BAF27550.2| Os11g0139500 [Oryza sativa Japonica Group]
Length = 252
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI-RSRKDVG 208
SWAD S ++KSVYV+NLP +V+++++ F+ GE+ E VV+ SR
Sbjct: 16 SWADPKNNDSV--STSQVKSVYVKNLPKNVTQAQLKRLFEHHGEI--EKVVLPPSRGGHD 71
Query: 209 ICYAFVEFEDMTGVRNAVE 227
Y FV F+D + A++
Sbjct: 72 NRYGFVHFKDRSMAMRALQ 90
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
EEE VYV NLP S ++ +I +EF KFG+L S + + G +AF+E+ED
Sbjct: 4 EEESARVYVGNLPESCTQKDIEDEFGKFGKLISCDL---KKNAGGSTFAFLEYEDARDAH 60
Query: 224 NAVE 227
+A++
Sbjct: 61 DAIK 64
>gi|297789286|ref|XP_002862625.1| hypothetical protein ARALYDRAFT_920469 [Arabidopsis lyrata subsp.
lyrata]
gi|297792763|ref|XP_002864266.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308263|gb|EFH38883.1| hypothetical protein ARALYDRAFT_920469 [Arabidopsis lyrata subsp.
lyrata]
gi|297310101|gb|EFH40525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
+ ++V NLP + + + FK+FGE+ VV + D Y FV F D R
Sbjct: 8 DTTFTKIFVENLPWTTRQEGLVNFFKRFGEIIRANVVFYKKTDRSQGYGFVTFRDAESAR 67
Query: 224 NAVE 227
NA +
Sbjct: 68 NACK 71
>gi|156846854|ref|XP_001646313.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116988|gb|EDO18455.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 580
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 134 QPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGE 193
QP +Q+E+ S A E S A G D S+YV L PSVSE+ + + F G
Sbjct: 20 QPASQEESSSGSAAEVSSASNGGNSGTAVDS---ASLYVGELDPSVSEALLYDIFSPIGP 76
Query: 194 LSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV----------CILMW 233
+SS V + + YA+V F D + A+E C +MW
Sbjct: 77 VSSIRVCRDAVTKTSLGYAYVNFNDHDSGKVAIEKLNYTPIKGKPCRIMW 126
>gi|108863977|gb|ABG22355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 361
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD S ++KSVYV+NLP +V+++
Sbjct: 98 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSV--STSQVKSVYVKNLPKNVTQA 155
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 156 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 199
>gi|297818014|ref|XP_002876890.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297322728|gb|EFH53149.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 417
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
V+ + + S++V NLP + ++ E FK FG + +G+ +RS + C FV FE+
Sbjct: 269 VKQQAQGSSIFVANLPMDATIEQLYETFKGFGAIRKDGIQVRSYPEKKNCIGFVAFENGE 328
Query: 221 GVRNAVEV 228
++N +
Sbjct: 329 SIKNVFQA 336
>gi|156085070|ref|XP_001610018.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
gi|154797270|gb|EDO06450.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
Length = 383
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC 229
V+V+N+PP++SE+E+ E +K G++ S +V + Y F EF+D + A VC
Sbjct: 157 VFVQNIPPTMSEAEVKELLEKHGKIKSSNLVKDLKTGQNKGYGFFEFDDSRAAKMA--VC 214
Query: 230 ILMWH 234
L H
Sbjct: 215 HLNGH 219
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E V D+ + +V+V+NL + +E ++ + F +FG L+S VV+R C+ FV
Sbjct: 118 QERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSI-VVMRDADGKSRCFGFVN 176
Query: 216 FEDMTGVRNAVEVC 229
FE+ AV+
Sbjct: 177 FENADDAARAVDTL 190
>gi|356513699|ref|XP_003525548.1| PREDICTED: uncharacterized protein LOC100799940 [Glycine max]
Length = 273
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 94 QKHTYASILRVAK-GQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
+K +YASI++V K G V Q + K+ P N V E+V S ++
Sbjct: 135 EKKSYASIVKVQKEGLVATKVYVQTNTLKS-GPNKTENKV------VESVESTEVSEAAL 187
Query: 153 DT--GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
D+ E S +E E S+Y+RNLP +V+ +++ EFKKFG + G+ +R+ K+
Sbjct: 188 DSVNNPESSDAHEEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNNKN 243
>gi|30678068|ref|NP_178462.3| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|26453142|dbj|BAC43647.1| unknown protein [Arabidopsis thaliana]
gi|28951005|gb|AAO63426.1| At2g03640 [Arabidopsis thaliana]
gi|330250635|gb|AEC05729.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 422
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S++V NLP + ++ E FK FG + +G+ +RS + C FV FE+ V+N +
Sbjct: 276 SIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQA 335
>gi|334184131|ref|NP_001189508.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|330250638|gb|AEC05732.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
S++V NLP + ++ E FK FG + +G+ +RS + C FV FE+ V+N +
Sbjct: 277 SIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQ 335
>gi|334184129|ref|NP_001189507.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|330250637|gb|AEC05731.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 453
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
S++V NLP + ++ E FK FG + +G+ +RS + C FV FE+ V+N +
Sbjct: 276 SIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQ 334
>gi|79316663|ref|NP_001030964.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|4406775|gb|AAD20086.1| unknown protein [Arabidopsis thaliana]
gi|330250636|gb|AEC05730.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 423
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S++V NLP + ++ E FK FG + +G+ +RS + C FV FE+ V+N +
Sbjct: 277 SIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQA 336
>gi|242050824|ref|XP_002463156.1| hypothetical protein SORBIDRAFT_02g038630 [Sorghum bicolor]
gi|241926533|gb|EER99677.1| hypothetical protein SORBIDRAFT_02g038630 [Sorghum bicolor]
Length = 484
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 163 DEEEI--KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
DE+E+ KS NLP + + +EF KFG + S G+ ++ + D C+ FVEFE
Sbjct: 291 DEKEVARKSYASINLPFDATVKMVEQEFSKFGAIKSGGIQVKCQPD-QFCFGFVEFEAQQ 349
Query: 221 GVRNAVEVCILM 232
+ A+E+ +++
Sbjct: 350 SMVAAIELSMVL 361
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL S +E + E F KFG ++S +V+R+ C+ FV FE+ A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKEMFGKFGPITSV-IVVRADDGKSRCFGFVNFENPDDAARA 277
Query: 226 VE 227
VE
Sbjct: 278 VE 279
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+E VYV NLP + EI EEF+KFG++ V R G +AFVEFED ++
Sbjct: 5 DENGRVYVGNLPSECDQREIEEEFEKFGKIKRCDV---KRGANGSSFAFVEFEDPRDAKD 61
Query: 225 AVE 227
A++
Sbjct: 62 AIK 64
>gi|108863978|gb|ABA91387.2| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 501
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD S ++KSVYV+NLP +V+++
Sbjct: 238 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSV--STSQVKSVYVKNLPKNVTQA 295
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 296 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 339
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE S + D + ++++V LP V E E+ ++F KFG++ +V + YAFV
Sbjct: 95 EEDSNINDTDPFRTIFVGRLPYEVDELELQKQFIKFGDIERVRIVRDKLTNEPKGYAFVL 154
Query: 216 FEDMTGVRNA 225
F+D G R A
Sbjct: 155 FKDTEGSRKA 164
>gi|326678004|ref|XP_002666145.2| PREDICTED: msx2-interacting protein [Danio rerio]
Length = 3138
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP V E +I E FK+FG + S V+R R G AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPEHVREEKIVEHFKRFGRVESVK-VLRKRGSEGGVAAFVDFVDIKSAQKA 62
>gi|414884858|tpg|DAA60872.1| TPA: putative AP2/EREBP transcription factor superfamily protein
[Zea mays]
Length = 1012
Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL +V+ E+ E F+K+G ++S+ VV+R C+AFV FE++ A
Sbjct: 273 KFSNVYVKNLSDTVTNDELKEMFEKYGTITSD-VVMRDNVGNSRCFAFVIFENVEVAAQA 331
Query: 226 VE 227
V+
Sbjct: 332 VQ 333
>gi|18394029|ref|NP_563932.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|8920577|gb|AAF81299.1|AC027656_16 Strong similarity to a hypothetical protein At2g03640 gi|4406775
from Arabidopsis thaliana BAC T18C20 gb|AC006836. It
contains a nuclear transport factor 2 (NTF2) domain
PF|02136 [Arabidopsis thaliana]
gi|16648785|gb|AAL25583.1| At1g13730/F21F23_12 [Arabidopsis thaliana]
gi|22655180|gb|AAM98180.1| expressed protein [Arabidopsis thaliana]
gi|30387519|gb|AAP31925.1| At1g13730 [Arabidopsis thaliana]
gi|332190940|gb|AEE29061.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 428
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 134 QPTTQQETVSSYAYE-KSWADTGEEISA--VEDEEEIKSVYVRNLPPSVSESEIAEEFKK 190
+P ++ T S A E K+ A E SA ++ + E +++V NL + ++ E FK
Sbjct: 240 KPKSKPVTKPSAARESKAPAPVSEHSSAATIDQQAEGYTIFVANLLMDATPEQLNETFKG 299
Query: 191 FGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
FG ++ +G+ +RS + G C+ FV F V+ +L H
Sbjct: 300 FGAITKDGIQVRSYRLKGNCFGFVTFASAEAVK-----LVLQAH 338
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 135 PTTQQETVSSYAYEKSWADT--GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
P T++ET + A + A T EE + ED+ + S+YV L PSV+E+ + E F G
Sbjct: 11 PATKEETTTEAAPAEGEAKTESSEEKGSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIG 70
Query: 193 ELSSEGVVIRSRKDVGICYAFVEFEDMT-GVRNAVEV---------CILMW 233
++S V + + YA+V F + G+R E+ C +MW
Sbjct: 71 PVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMW 121
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
++ +VYV+NL S +E ++ F ++GE++S V++R C+ FV FE+
Sbjct: 212 KKFNNVYVKNLSESTTEEDLKNIFGEYGEITS-AVIMRDADGKSKCFGFVNFENTDAAAK 270
Query: 225 AVE 227
AVE
Sbjct: 271 AVE 273
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE + D+ + +VYV+NL ++ E+ F ++G +SS VV+R C+ FV
Sbjct: 208 EERESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSA-VVMRDGDGKSRCFGFVN 266
Query: 216 FEDMTGVRNAVEV 228
FE+ AVE
Sbjct: 267 FENPEDAARAVEA 279
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+ +VYV+NL + ++ ++ + F FG +SS VV+R C+ FV FE++ N
Sbjct: 201 KNFNNVYVKNLAEATTDEDLRKVFAGFGPISS-AVVMRDADGKSKCFGFVNFENVDDAAN 259
Query: 225 AVE 227
AVE
Sbjct: 260 AVE 262
>gi|358332520|dbj|GAA32217.2| scaffold attachment factor B2 [Clonorchis sinensis]
Length = 696
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 127 SDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAE 186
+D N PQ Q + K+ ++G+ E EI++++V NLP +V +++ +
Sbjct: 141 ADSNGAPQSNLAQTEKAEECKPKAEEESGK---GTEPGSEIRNLWVSNLPRTVKAADLKQ 197
Query: 187 EFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
F K G++ S VV+ +R G C+ FVE
Sbjct: 198 HFSKAGKVVSATVVMSTRTPGG-CFGFVEM 226
>gi|294879376|ref|XP_002768666.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871376|gb|EER01384.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 342
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E +VY++++PPS +E +I EEF FGE++S + + G +AFV F + R
Sbjct: 2 ENFTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPK---GRRFAFVNFAEFEQARA 58
Query: 225 AVE 227
AVE
Sbjct: 59 AVE 61
>gi|407425857|gb|EKF39534.1| hypothetical protein MOQ_000234 [Trypanosoma cruzi marinkellei]
Length = 604
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS-VYVRNL 175
P+VS + P+ V TQQ A + D G S + ++EI+S ++V L
Sbjct: 188 PAVSSTLEPLVACGGVSPQQTQQHFDVPIAGITAERDAGNSQSRRDPQDEIRSNLFVSGL 247
Query: 176 PPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDMTGVRNAVE 227
SV+++E+ + F +GE+ S V+ I + K GI AFV+F+++ A E
Sbjct: 248 HASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGI--AFVKFKEVANAERAAE 299
>gi|326517876|dbj|BAK07190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + +YV LPPS + E+ + F ++G++ VV G +AFVEF D G A
Sbjct: 4 ETRKLYVGGLPPSAQQDELKDHFSRYGDVLCVRVVRDWETGQGRGFAFVEFADEEGAHAA 63
Query: 226 VE 227
++
Sbjct: 64 LQ 65
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+YV NLPP ++ EI E F FG L + V +R G +A+VEFED R+AV+
Sbjct: 14 IYVGNLPPGAAKHEIEERFSDFGRLRNVWV---ARNPPG--FAYVEFEDHRDARDAVK 66
>gi|15224171|ref|NP_180035.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75337303|sp|Q9SJA6.1|RZ22A_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22A; AltName:
Full=RS-containing zinc finger protein 22A;
Short=At-RSZ22a; Short=At-RSZp22a
gi|4572679|gb|AAD23894.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|26450830|dbj|BAC42523.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|28950713|gb|AAO63280.1| At2g24590 [Arabidopsis thaliana]
gi|330252501|gb|AEC07595.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 196
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++FED R+A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWV---ARRPPG--YAFLDFEDSRDARDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E V + +VYV+NL S +E + E F KFG ++S VV+R C+ FV
Sbjct: 206 QERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSV-VVMREGDGKSRCFGFVN 264
Query: 216 FEDMTGVRNAVE 227
FE+ AVE
Sbjct: 265 FENPDDAARAVE 276
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 122 NISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISA-VEDEEEIKSVYVRNLPPSVS 180
N SP +PTT VS+ + A + + I A V+ E +++RNLP +
Sbjct: 243 NASPPVSHRIQHEPTTDHSDVSAEKEDNDPAGSTDAIDANVKLIRETGRLFIRNLPYDTT 302
Query: 181 ESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
E ++ EF +FG+L + SR +A+ +F D
Sbjct: 303 EEDLQSEFARFGKLEELHIAFDSRHSTSKGFAYAQFFD 340
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK-DVGICYAFVEFED 218
+ED E + ++V +P E+++ F +FGE+ S VV+R R+ G + FVEFED
Sbjct: 1 MEDAAESRKLFVGGIPAGAQEADLRAHFARFGEVRSV-VVMRDRETGHGRGFGFVEFED 58
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 157 EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
E + E +VYV+N P +VS+ + + F+++GE++S ++R C+ FV F
Sbjct: 192 ERESTNGERRFTNVYVKNFPDNVSDDDFRKSFERYGEITS-CKIMRKEDGTSKCFGFVNF 250
Query: 217 EDMTGVRNAVE 227
++ + E
Sbjct: 251 KEADDAKKCCE 261
>gi|224143401|ref|XP_002324943.1| predicted protein [Populus trichocarpa]
gi|222866377|gb|EEF03508.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE E+ +EF++FG + S V +R+ G YAF++F+D ++A+
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRRFGVIRSVWV---ARRPPG--YAFIDFDDKRDAQDAI 55
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VYV NLP V E ++ + F K+G ++ V +++R+ G +AFVEFED +AV+
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIAD--VDLKNRRGAGPPFAFVEFEDPRDAEDAVK 66
>gi|361123874|gb|EHK96020.1| putative Meiotic activator RIM4 [Glarea lozoyensis 74030]
Length = 667
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR---SRKDVG--ICYAFVEFED 218
E + +S++V NLP S +E++IA+ F+ +G +++ +V+R S+ D C+AFVEF
Sbjct: 380 EVDRRSIFVGNLPMSTTEAQIAQLFEHYGTINN--IVVREATSKYDGAEKFCFAFVEFNS 437
Query: 219 MTGVRNAV 226
V A+
Sbjct: 438 AVAVTRAI 445
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
V + + +VYV+NL S +E ++ EF +G ++S V++R C+ FV FE+
Sbjct: 204 VLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITS-AVLMRDADGRSKCFGFVNFENAE 262
Query: 221 GVRNAVEVC 229
AVE
Sbjct: 263 DAAKAVEAL 271
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 134 QPTTQQETVSSYAYEKSWADTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
+PTT VS+ + A + + I A V+ E +++RNLP +E ++ EF +FG
Sbjct: 255 EPTTDHSDVSAEKEDNDPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFG 314
Query: 193 ELSSEGVVIRSRKDVGICYAFVEFED 218
+L + SR +A+ +F D
Sbjct: 315 KLEELHIAFDSRHSTSKGFAYAQFFD 340
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVR 223
+++ +YV NLP ++ E+ EEF+KFG++ V ++ V G+ +AFVEF D R
Sbjct: 4 DKVVRLYVGNLPDDCTQREVEEEFEKFGKI----VYCELKRTVSGLPFAFVEFSDYRDAR 59
Query: 224 NAVE 227
+A++
Sbjct: 60 DAIK 63
>gi|222615491|gb|EEE51623.1| hypothetical protein OsJ_32902 [Oryza sativa Japonica Group]
Length = 1042
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 129 WNHVPQPTTQQETVS------SYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSES 182
+NH +QE S S A SWAD S ++KSVYV+NLP +V+++
Sbjct: 617 YNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSV--STSQVKSVYVKNLPKNVTQA 674
Query: 183 EIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRNAVE 227
++ F+ GE+ E VV+ SR Y FV F+D + A++
Sbjct: 675 QLKRLFEHHGEI--EKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQ 718
>gi|161078444|ref|NP_650913.2| syncrip, isoform B [Drosophila melanogaster]
gi|442620151|ref|NP_001097848.2| syncrip, isoform L [Drosophila melanogaster]
gi|158030316|gb|AAN13835.2| syncrip, isoform B [Drosophila melanogaster]
gi|440217680|gb|ABW08710.2| syncrip, isoform L [Drosophila melanogaster]
Length = 711
Score = 43.5 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 324 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 374
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 375 ---YAFIHFED 382
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ + ++YV+N P +V+E+ + E F +GE++S +V K+ C F+ + D
Sbjct: 188 NDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITSM-IVKSDNKNRKFC--FINYSDADSA 244
Query: 223 RNAVE 227
RNA+E
Sbjct: 245 RNAME 249
>gi|15236000|ref|NP_194886.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|145334187|ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|75318746|sp|O81126.1|RZP22_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22; AltName:
Full=RS-containing zinc finger protein 22;
Short=At-RSZ22; Short=At-RSZp22
gi|3281869|emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|3435094|gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana]
gi|7270061|emb|CAB79876.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|17529204|gb|AAL38828.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21436285|gb|AAM51281.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21554419|gb|AAM63524.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|332660531|gb|AEE85931.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|332660532|gb|AEE85932.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
Length = 200
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++FED R+A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWV---ARRPPG--YAFLDFEDPRDARDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D+ +VYV+NL + +E ++ + F ++G ++S VV+R C+ FV FE+
Sbjct: 198 DKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITS-AVVMRDGDGKTKCFGFVNFENADDA 256
Query: 223 RNAVEVC 229
AVE
Sbjct: 257 ATAVEAL 263
>gi|2582645|emb|CAA05352.1| RSZp22 protein [Arabidopsis thaliana]
Length = 200
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++FED R+A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWV---ARRPPG--YAFLDFEDPRDARDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|212539816|ref|XP_002150063.1| RNA binding protein MSSP-2, putative [Talaromyces marneffei ATCC
18224]
gi|210067362|gb|EEA21454.1| RNA binding protein MSSP-2, putative [Talaromyces marneffei ATCC
18224]
Length = 577
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 137 TQQETVSSYAYEKSWADTGEEISA--VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
TQQ+ A W + + A +E+ E I +VY+R PP ++ + +FGE+
Sbjct: 207 TQQDPPIPRAIPAMWTNQSDLTLAKCLENREGITNVYIRGFPPETTDEMLHAYASRFGEI 266
Query: 195 SSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNAVE 227
++ D G+C +AFV+F + N +
Sbjct: 267 DRCKAIV--DLDTGLCKGFAFVQFYNFESCENCIR 299
>gi|47229663|emb|CAG06859.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3147
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP V E +I E FK++G + S V+R R G AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPEHVREEKIVEHFKRYGRVESVK-VLRKRGSEGGVAAFVDFVDIKSAQKA 62
>gi|410919705|ref|XP_003973324.1| PREDICTED: msx2-interacting protein-like [Takifugu rubripes]
Length = 3242
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP V E +I E FK++G + S V+R R G AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPEHVREEKIVEHFKRYGRVESVK-VLRKRGSEGGVAAFVDFVDIKSAQKA 62
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
V+V NLP + +E + + F G + S VV SR G+ Y FVEF D++ AV
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVA-SRNSAGLAYGFVEFVDVSSAERAVRT 86
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ ++VYV+NL S ++ E+ + F +FG ++S VV+R C+ F+ FE A
Sbjct: 215 KFQNVYVKNLSESTTDDELKKVFGEFGNITS-AVVMRDADGKSKCFGFINFETAEDAAKA 273
Query: 226 VE 227
VE
Sbjct: 274 VE 275
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+ +VY++++PPS +E +I EEF FGE++S + + G +AFV F + R
Sbjct: 224 KNFTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPK---GRRFAFVNFAEFEQARA 280
Query: 225 AVE 227
AVE
Sbjct: 281 AVE 283
>gi|194695198|gb|ACF81683.1| unknown [Zea mays]
gi|414592148|tpg|DAA42719.1| TPA: hypothetical protein ZEAMMB73_519506 [Zea mays]
Length = 313
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK-DVGICYAFVEFED 218
+ED E + ++V +P E+++ F +FGE+ S VV+R R+ G + FVEFED
Sbjct: 1 MEDAAESRKLFVGGIPAGAQEADLRAHFARFGEVRSV-VVMRDRETGHGRGFGFVEFED 58
>gi|432959160|ref|XP_004086189.1| PREDICTED: msx2-interacting protein-like [Oryzias latipes]
Length = 3173
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP V E +I E FK++G + S V+R R G AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPEHVREEKIVEHFKRYGRVESVK-VLRKRGSEGGVAAFVDFVDIKSAQKA 62
>gi|429860568|gb|ELA35298.1| hlh transcription factor [Colletotrichum gloeosporioides Nara gc5]
Length = 785
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV-EV 228
++V+N P VS EIAE F KFGE+ GV RK + FV ++D V+ AV EV
Sbjct: 572 IFVQNYPFKVSRDEIAEAFAKFGEVV--GVSQPPRK----TFCFVYYKDAASVQEAVREV 625
Query: 229 CILMWH 234
WH
Sbjct: 626 DGTFWH 631
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE- 227
S+YV +L PSVSE+ + + F G +SS V + + YA+V F D + A+E
Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEK 95
Query: 228 ---------VCILMW 233
+C +MW
Sbjct: 96 LNFTPIKGKLCRIMW 110
>gi|297802872|ref|XP_002869320.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
gi|297315156|gb|EFH45579.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++FED R+A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRTFGVIRS---VWVARRPPG--YAFLDFEDPRDARDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 43.1 bits (100), Expect = 0.095, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 147 YEKSWADT---GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRS 203
YEK+W G + ED E +YVRNLP + +E ++ FK FG LS + +
Sbjct: 229 YEKAWMKKVAEGHQDCETEDISESGRLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDD 288
Query: 204 RKDVGICYAFVEF 216
+ + F+ +
Sbjct: 289 MSKKSVGFGFITY 301
>gi|116788096|gb|ABK24755.1| unknown [Picea sitchensis]
Length = 506
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
EE+KSVYVRNLP +V+E ++ E F + GE++ ++ + + FV + D +
Sbjct: 294 EEVKSVYVRNLPENVTEEQLRELFGRHGEVTKVVLLEQKPGQPKRDFGFVHYADHSSAMK 353
Query: 225 AVE 227
A+E
Sbjct: 354 AIE 356
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|242803594|ref|XP_002484206.1| RNA binding protein MSSP-2, putative [Talaromyces stipitatus ATCC
10500]
gi|218717551|gb|EED16972.1| RNA binding protein MSSP-2, putative [Talaromyces stipitatus ATCC
10500]
Length = 577
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 137 TQQETVSSYAYEKSWADTGEEISA--VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
TQQ+ A W + + A +E+ E I +VY+R PP ++ + +FGE+
Sbjct: 207 TQQDPPIPRAIPAMWTNQSDLTLAKCLENREGITNVYIRGFPPETTDEMLHAYASRFGEI 266
Query: 195 SSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNAVE 227
++ D G+C +AFV+F + N +
Sbjct: 267 DRCKAIV--DLDTGLCKGFAFVQFFNFESCENCIR 299
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|206598188|gb|ACI15994.1| RNA-binding protein [Bodo saltans]
Length = 415
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
E ++YV LPPS + + + E F +FG + S V+ +R + C+ FV FE T
Sbjct: 105 EGMNLYVSQLPPSYNSTRLREVFSQFGAIHSAKVMHDARTNESRCFGFVLFERST 159
>gi|357153147|ref|XP_003576354.1| PREDICTED: polyadenylate-binding protein 3-like [Brachypodium
distachyon]
Length = 582
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-G 208
SWAD SA ++KSVYV+NLP +V++ ++ + F+ GE++ +V+ KD
Sbjct: 337 SWADPKNGDSA--STSQVKSVYVKNLPKNVTQGQLKKLFEHHGEITK--IVLPPSKDGHD 392
Query: 209 ICYAFVEFED----MTGVRN 224
Y FV F+D M ++N
Sbjct: 393 NRYGFVHFKDRHMAMKALKN 412
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 9 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 63
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 64
>gi|71005326|ref|XP_757329.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
gi|46096733|gb|EAK81966.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
Length = 464
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
V+V NLP + +E + E F G++ S VV SR G+ Y FVE+ D+ A+
Sbjct: 31 VHVANLPATTTERALREMFGSLGQMQSARVVA-SRSAGGLAYGFVEYVDVASAERAIRT 88
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++YV+NL P + E + E+F +FG++SS ++ R V + F+ FE+ + A+E
Sbjct: 194 NLYVKNLDPEIGEEHLQEKFSEFGKISSM-IISRDENGVSRGFGFINFENSDDAKRALET 252
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL S ++ E+ + F+ +G +SS VV+R + C+ FV FE A
Sbjct: 201 KFNNVYVKNLADSTTDDELKKVFEAYGPISS-AVVMRDNEGKSKCFGFVNFEHADDAAKA 259
Query: 226 VEVC 229
VE
Sbjct: 260 VEAL 263
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E +V ++ + +V+V+NL + SE ++ F +FG ++S VV+R + C+ FV
Sbjct: 196 QERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSV-VVMRDGEGKSKCFGFVN 254
Query: 216 FEDMTGVRNAVEVC 229
FE+ +VE
Sbjct: 255 FENADDAARSVEAL 268
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E +V ++ + +V+V+NL + SE ++ F +FG ++S VV+R + C+ FV
Sbjct: 196 QERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSV-VVMRDGEGKSKCFGFVN 254
Query: 216 FEDMTGVRNAVEVC 229
FE+ +VE
Sbjct: 255 FENADDAARSVEAL 268
>gi|356531689|ref|XP_003534409.1| PREDICTED: uncharacterized protein LOC100818518 [Glycine max]
Length = 780
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
G +AV+ E + ++Y+ LPP++ + + + F++FGE+ V+ + Y F
Sbjct: 451 AGLGAAAVKKEIDDTNLYIGYLPPNLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGF 510
Query: 214 VEFEDMTGVRNAV 226
V++ D+T NA+
Sbjct: 511 VKYADITMANNAI 523
>gi|15222258|ref|NP_177085.1| nuclear transport factor 2 and RNA recognition motif-containing
protein [Arabidopsis thaliana]
gi|6730639|gb|AAF27060.1|AC008262_9 F4N2.20 [Arabidopsis thaliana]
gi|12325079|gb|AAG52488.1|AC018364_6 putative RNA-binding protein; 63745-61607 [Arabidopsis thaliana]
gi|30017247|gb|AAP12857.1| At1g69250 [Arabidopsis thaliana]
gi|332196781|gb|AEE34902.1| nuclear transport factor 2 and RNA recognition motif-containing
protein [Arabidopsis thaliana]
Length = 427
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 68 NGSLQNAVNAAQDYLPASVEEPVGEPQ----KHTYASILRVAKGQSTPSVTPQPSVSKNI 123
NG ++ + A + V EP PQ K ++A I+ G + P S
Sbjct: 187 NGKMKQSEKAV---ITQKVTEPDAAPQPDGAKRSFADIV----GSMAKNAAPFQVKSPVQ 239
Query: 124 SPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESE 183
+PV +V QP KS +++ V S++V NLP + +
Sbjct: 240 APVQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGT----SIFVANLPLNAMPPQ 295
Query: 184 IAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRNAVEVC 229
+ E FK FG + G+ +RS + +C+ F+ FE + V++ ++
Sbjct: 296 LFELFKDFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQSVLQAA 343
>gi|391324923|ref|XP_003736991.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Metaseiulus
occidentalis]
Length = 558
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE + E ++K +YVRNL V+E ++ E F++FG G V R +K
Sbjct: 333 WADPQEEPDS-ETMSKVKVLYVRNLTQEVTEEKLKEVFEEFG-----GRVERVKKIRD-- 384
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A+E
Sbjct: 385 YAFVHFEDREDALRALE 401
>gi|118489183|gb|ABK96398.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF++FG + S V R YAF++F+D ++A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRP-----PGYAFIDFDDKRDAQDAI 55
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDARDADDAVKA 64
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 192
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE E+ +EF+ FG + S V +R+ G YAF++F+D R+A+
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWV---ARRPPG--YAFIDFDDPRDARDAI 55
>gi|224121292|ref|XP_002330791.1| predicted protein [Populus trichocarpa]
gi|222872593|gb|EEF09724.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF++FG + S V +R+ G YAF++F+D ++A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWV---ARRPPG--YAFIDFDDKRDAQDAI 55
>gi|330842170|ref|XP_003293056.1| hypothetical protein DICPUDRAFT_41462 [Dictyostelium purpureum]
gi|325076641|gb|EGC30411.1| hypothetical protein DICPUDRAFT_41462 [Dictyostelium purpureum]
Length = 505
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E E +I +V+V+ LP + +E+++ E F+K+GE+ + V++ + + Y FV F +
Sbjct: 15 ESEVDICNVFVKYLPCNFNEADLHELFEKYGEIVNTKVMVNIKTGNSLGYGFVRFSNPED 74
Query: 222 VRNAVE 227
+ A++
Sbjct: 75 AQEAIK 80
>gi|189234965|ref|XP_973687.2| PREDICTED: similar to CG17838 CG17838-PB [Tribolium castaneum]
Length = 905
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL +SE ++ E F+ +G++ ++ KD
Sbjct: 340 WADPQEE----PDEQTMSKVKVLYVRNLTQEISEEKLKEAFEAYGKVER----VKKIKD- 390
Query: 208 GICYAFVEFEDMTGVRNAVE 227
YAF+ FED A+E
Sbjct: 391 ---YAFIHFEDRENAVKAME 407
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF++FG + S V +R+ G YAF++F+D ++A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWV---ARRPPG--YAFIDFDDKRDAQDAI 55
>gi|384248235|gb|EIE21720.1| hypothetical protein COCSUDRAFT_83509 [Coccomyxa subellipsoidea
C-169]
Length = 490
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
DE SV+VRNLP V+E ++ FK+ G L V + +AFV+F+D T
Sbjct: 313 RDELPGTSVFVRNLPQDVTEEKLEAAFKEIGALRGAKPVNLKIQKGKESFAFVDFQDSTA 372
Query: 222 VRNAVEVCILM 232
+ A+ +L+
Sbjct: 373 QQAAIAGPVLV 383
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++RK G +AFVEFED +AV
Sbjct: 14 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRK--GPPFAFVEFEDPRDADDAVRA 68
>gi|356542092|ref|XP_003539505.1| PREDICTED: uncharacterized protein LOC100800982 isoform 1 [Glycine
max]
gi|356542094|ref|XP_003539506.1| PREDICTED: uncharacterized protein LOC100800982 isoform 2 [Glycine
max]
Length = 780
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
S G +A++ E + ++Y+ LPP++ + + + F++FGE+ V+ +
Sbjct: 447 SAPQAGLGAAAIKKEIDDTNLYIGYLPPTLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSK 506
Query: 210 CYAFVEFEDMTGVRNAV 226
Y FV++ D+T NA+
Sbjct: 507 GYGFVKYADITMANNAI 523
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E D+ +V+V+NL + +E ++ + F +FG ++S VV+R C+ FV
Sbjct: 192 QERDTATDKMRFNNVFVKNLSETTTEEDLNKTFGEFGTITSI-VVMRDGDGKSKCFGFVN 250
Query: 216 FEDMTGVRNAVEVC 229
FE+ AVE
Sbjct: 251 FENAEDAAKAVEAL 264
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E V + +VYV+NL S +E + E F KFG ++S VV+R C+ FV
Sbjct: 206 QERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSV-VVMREGDGKSRCFGFVN 264
Query: 216 FEDMTGVRNAVE 227
FE+ AVE
Sbjct: 265 FENPDDAARAVE 276
>gi|340059437|emb|CCC53821.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 131
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 157 EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFV 214
E + D +++VY+ +LPP+ ++ E+ F FG++ S +V K G+C Y FV
Sbjct: 5 EFAMPLDPPYVRNVYIASLPPTYTDEELRNLFSPFGKIVSTALV--KDKRTGLCKGYGFV 62
Query: 215 EFEDMTGVRNAV 226
E+ NAV
Sbjct: 63 LMENFQDSYNAV 74
>gi|328718428|ref|XP_001946747.2| PREDICTED: hypothetical protein LOC100169050 [Acyrthosiphon pisum]
Length = 3414
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-----GICYAFVEFEDMT 220
E + ++V NLP ++ E +I E FK++G + S ++ RS+++V G+C A V F D+
Sbjct: 4 ETRHLWVGNLPDNIREEKIREHFKRYGRVQSVKILARSKEEVVLGASGVC-ATVSFMDIK 62
Query: 221 GVRNAVEV 228
A V
Sbjct: 63 SASKAHNV 70
>gi|19112839|ref|NP_596047.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe 972h-]
gi|158564269|sp|Q2L4W6.1|SPO5_SCHPO RecName: Full=Sporulation-specific protein 5; AltName: Full=Meiotic
RNA-binding protein 1; AltName: Full=Meiotically
up-regulated gene 12 protein
gi|5051491|emb|CAB44770.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe]
gi|86197907|dbj|BAE78593.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe]
Length = 567
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
S +E ++VY+R LPP+ S+ + +FG++SS +I ++ Y F FE+
Sbjct: 287 SNMESTSRTRNVYIRGLPPNTSDENLLLYTNRFGKVSSSKAIIDMETNLCKGYGFACFEE 346
Query: 219 MTGVRNAVEVCI 230
+ +CI
Sbjct: 347 ----EKSALICI 354
>gi|195449649|ref|XP_002072163.1| GK22469 [Drosophila willistoni]
gi|194168248|gb|EDW83149.1| GK22469 [Drosophila willistoni]
Length = 731
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 120 SKNISPVSD--WNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPP 177
+KN+ P + N +P P +T+ + D+ ++ AV + +VRNLP
Sbjct: 255 NKNVRPAVEDPANSLPSPPADSQTLGTETTR--ILDSASDVDAVRSSMRL---FVRNLPY 309
Query: 178 SVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
S ++ ++ EF+ FG L++ V + + +AF+++ D A+
Sbjct: 310 SATKEDLEAEFEPFGNLAAVHVSMSKKTGSAKGFAFIQYSDADAAERAL 358
>gi|297833508|ref|XP_002884636.1| hypothetical protein ARALYDRAFT_340916 [Arabidopsis lyrata subsp.
lyrata]
gi|297330476|gb|EFH60895.1| hypothetical protein ARALYDRAFT_340916 [Arabidopsis lyrata subsp.
lyrata]
Length = 624
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
EE + V+NLPP+ + + + FK+FG++ + +R+ YAFVEFE+
Sbjct: 320 EEAAGICVQNLPPNATIALVERVFKQFGQIKKGRIQVRNPAKSNYWYAFVEFEEADAAER 379
Query: 225 AVEVCIL 231
A++ L
Sbjct: 380 AIKASPL 386
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++ V+NLP + + + + K+FGE+ GV +RS K YA+VEFE+ A+
Sbjct: 204 AICVKNLPLNATIALVKNALKQFGEIRRGGVKVRSTKYYEGKYAYVEFEEADAANRAI 261
>gi|157132620|ref|XP_001656100.1| heterogeneous nuclear ribonucleoprotein r [Aedes aegypti]
gi|108881674|gb|EAT45899.1| AAEL002879-PA, partial [Aedes aegypti]
Length = 517
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 15/80 (18%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL SE ++ E F++FG++ ++ KD
Sbjct: 290 WADPQEE----PDEQTMSKVKVLYVRNLTQDTSEEKLKESFEQFGKVER----VKKIKD- 340
Query: 208 GICYAFVEFEDMTGVRNAVE 227
YAF+ FED NA++
Sbjct: 341 ---YAFIHFEDRDHAVNAMK 357
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+++V LP V+E EI EF FG + + +V + + Y FVE+E G RNA+
Sbjct: 100 TLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLVRDPKTNEQRSYCFVEYETEAGFRNAL 157
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 37/66 (56%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+++++ ++++RN+PP E + + F+ FG +S ++I CY F +FE+
Sbjct: 205 KEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKD 264
Query: 222 VRNAVE 227
+A++
Sbjct: 265 ALSAIQ 270
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI-RSRKDVGICYAFVEFEDMTGVRN 224
++ +V+V+ LPP S+ ++ E F FGE+ S V+ ++R++ + + FV F + ++
Sbjct: 120 DLCNVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQD 179
Query: 225 AVE 227
A++
Sbjct: 180 AIQ 182
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 124 SPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEE----EIKSVYVRNLPPSV 179
+P + + HVP + +++ + + E S+ ED+ E ++++ +LP V
Sbjct: 430 TPYNPYYHVP--MYDESSMNENQEQTHTKRSKNESSSPEDKNSKSGETANLFIFHLPGDV 487
Query: 180 SESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+S++ E F KFGE+ S V+ + ++ Y FV++ ++ AV
Sbjct: 488 DDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFVKYCNIDSAMEAV 534
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP ++E+A+ F FG + S V + + C+ FV F++ T +NA++
Sbjct: 598 NLFIYHLPQEFGDNELAQMFMPFGTVISAKVYVDRATNQSKCFGFVSFDNHTSAQNAIQA 657
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ +++RNLP SV E E+ +EF K GE+ ++ VIR+ + C A++ ++
Sbjct: 6 VSRLFIRNLPKSVEEKELVKEFSKMGEI-TDCKVIRTERGKSRCIAYIGYK 55
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV+
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFEDNRDADDAVKA 64
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ +VYV+NL + +E ++ E F KFG ++S VV+R C+ FV FE
Sbjct: 209 KFNNVYVKNLAETTTEDDLKEIFGKFGAITSV-VVMRDGDGRSKCFGFVNFE 259
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + VYV NLP V E E+ + F K+G + V I+S + G +AFVEFED +A
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKY--VDIKSGR--GPAFAFVEFEDHRDAEDA 62
Query: 226 VEV 228
V
Sbjct: 63 VRA 65
>gi|28317322|gb|AAO39657.1| AT01548p, partial [Drosophila melanogaster]
Length = 626
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 285 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 335
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 336 ---YAFIHFED 343
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL S +E + E F FG ++S +V+R+ C+ FV FE+ +A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHA 277
Query: 226 VE 227
VE
Sbjct: 278 VE 279
>gi|195498304|ref|XP_002096465.1| GE25686 [Drosophila yakuba]
gi|194182566|gb|EDW96177.1| GE25686 [Drosophila yakuba]
Length = 747
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 362 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 412
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 413 ---YAFIHFED 420
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + VYV NLP V E E+ + F K+G + V I+S + G +AFVEFED +A
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKY--VDIKSGR--GPAFAFVEFEDHRDAEDA 62
Query: 226 V 226
V
Sbjct: 63 V 63
>gi|307103016|gb|EFN51281.1| hypothetical protein CHLNCDRAFT_141215 [Chlorella variabilis]
Length = 365
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+K+V+V NLPP +E + + F K+GE+ + D Y FV F + AV
Sbjct: 180 VKNVFVGNLPPGATEDRLRDIFNKYGEVERTHIPRPRDGDTHSKYGFVHFRERAAAMRAV 239
Query: 227 E 227
E
Sbjct: 240 E 240
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL S +E + E F FG ++S +V+R+ C+ FV FE+ +A
Sbjct: 219 KFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHA 277
Query: 226 VE 227
VE
Sbjct: 278 VE 279
>gi|194899678|ref|XP_001979385.1| GG24121 [Drosophila erecta]
gi|190651088|gb|EDV48343.1| GG24121 [Drosophila erecta]
Length = 666
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 329 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 379
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 380 ---YAFIHFED 387
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 133 PQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG 192
PQPT +Q ++ E +TG +Y+RNL V+E EI E+F K G
Sbjct: 279 PQPTAEQPETAAPDEEDKIRETGR-------------LYLRNLHYEVTEDEIREQFSKHG 325
Query: 193 ELSSEGVVIRSRKDVGICYAFVEFED 218
L V ++ G +AFV+F++
Sbjct: 326 ALEEVHVPLKKADGKGKGFAFVQFQN 351
>gi|388851777|emb|CCF54583.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Ustilago hordei]
Length = 403
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
V+V NLP + +E ++ E F G++ S VV SR G+ Y FVE+ D A+
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVT-SRPVGGLVYGFVEYVDAASAERAIRT 65
>gi|302770274|ref|XP_002968556.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
gi|302788312|ref|XP_002975925.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300156201|gb|EFJ22830.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300164200|gb|EFJ30810.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
Length = 477
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 17/86 (19%)
Query: 150 SWAD--TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI------ 201
SWAD TG E +A +IK VYVRNLP +V+E ++ F+ GE++ VV+
Sbjct: 260 SWADPRTGAEPAATS---QIKVVYVRNLPEAVTEEQLRGLFEHHGEITK--VVLPQSKPG 314
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ ++D G FV F D A+E
Sbjct: 315 QPKRDFG----FVHFADRNDALKAIE 336
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ +VYV+NL + +E ++ E F KFG ++S VV+R C+ FV FE
Sbjct: 217 KFNNVYVKNLSENTTEDDLKEIFGKFGTITS-AVVMREGDGRSKCFGFVNFE 267
>gi|156377784|ref|XP_001630826.1| predicted protein [Nematostella vectensis]
gi|156217854|gb|EDO38763.1| predicted protein [Nematostella vectensis]
Length = 587
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE + +++K VY+RNL PS++E ++ EE+ ++G + ++ KD
Sbjct: 313 WADPQEEPDD-DAMKKVKVVYLRNLSPSITEEKLKEEYSQYGAVDR----VKKLKD---- 363
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV F + A+E
Sbjct: 364 YAFVHFTERDHALKAIE 380
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 188
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VY+ NL P V+E ++ +EF+ FG L S V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWV---ARRPPG--YAFIEFDDRRDALDAI 55
Query: 227 EV 228
+
Sbjct: 56 QA 57
>gi|442620155|ref|NP_001262780.1| syncrip, isoform N [Drosophila melanogaster]
gi|442620159|ref|NP_001262782.1| syncrip, isoform P [Drosophila melanogaster]
gi|440217682|gb|AGB96160.1| syncrip, isoform N [Drosophila melanogaster]
gi|440217684|gb|AGB96162.1| syncrip, isoform P [Drosophila melanogaster]
Length = 665
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 324 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 374
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 375 ---YAFIHFED 382
>gi|24648522|ref|NP_732556.1| syncrip, isoform D [Drosophila melanogaster]
gi|23171809|gb|AAF55805.2| syncrip, isoform D [Drosophila melanogaster]
Length = 707
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|413937735|gb|AFW72286.1| hypothetical protein ZEAMMB73_339392, partial [Zea mays]
Length = 119
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++
Sbjct: 57 ELMARVYVGNLDPRVTAREIEDEFRMFGVLRSVWV---ARKPPG--FAFIDFDDRRDAQD 111
Query: 225 AVE 227
A+
Sbjct: 112 AIR 114
>gi|123407360|ref|XP_001302992.1| embryonic poly [Trichomonas vaginalis G3]
gi|121884333|gb|EAX90062.1| embryonic poly, putative [Trichomonas vaginalis G3]
Length = 426
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
K V+V +LP SV E+ I E FK +G S V ++ K + +AFV FE + A+
Sbjct: 6 KEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAI 64
>gi|226506072|ref|NP_001146195.1| uncharacterized protein LOC100279765 [Zea mays]
gi|219886139|gb|ACL53444.1| unknown [Zea mays]
Length = 287
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWAD + S ++KS+YV+NLP +V++ ++ + F+ GE++ V+ ++
Sbjct: 45 SWADH-KNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKV-VIPPAKSGHEN 102
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F++ + V A++
Sbjct: 103 RYGFVHFKERSMVMKALK 120
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+V+V N+PP +++++ EF G LS+ V+I S+ + Y FV F ++ AVE
Sbjct: 320 NVFVYNIPPEWTDNDLVREFGSCGPLSTTRVIIDSQTNQSKGYGFVSFREVRSAMKAVET 379
>gi|242011880|ref|XP_002426671.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
gi|212510842|gb|EEB13933.1| Heterogeneous nuclear ribonucleoprotein Q, putative [Pediculus
humanus corporis]
Length = 548
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE A E ++K +YVRNL SE ++ E F+ +G++ ++ KD
Sbjct: 337 WADPQEEPDA-ETMSKVKVLYVRNLTQDCSEEKLKESFEVYGKIDR----VKKIKD---- 387
Query: 211 YAFVEFED 218
YAF+ FED
Sbjct: 388 YAFIHFED 395
>gi|442620161|ref|NP_001262783.1| syncrip, isoform Q [Drosophila melanogaster]
gi|440217685|gb|AGB96163.1| syncrip, isoform Q [Drosophila melanogaster]
Length = 761
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ +VYV+NL + +E ++ E F KFG ++S VV+R C+ FV FE
Sbjct: 302 KFNNVYVKNLAETTTEDDLKEIFGKFGTITSV-VVMRDGDGRSKCFGFVNFE 352
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
E + +YV NLP VS ++ EF+K+G + V +K V G +AF+EFED
Sbjct: 4 RESVSRIYVGNLPSHVSSRDVENEFRKYGNILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|442620149|ref|NP_001262778.1| syncrip, isoform K [Drosophila melanogaster]
gi|440217679|gb|AGB96158.1| syncrip, isoform K [Drosophila melanogaster]
Length = 753
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 358 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 408
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 409 ---YAFIHFED 416
>gi|225717240|gb|ACO14466.1| Msx2-interacting protein [Esox lucius]
Length = 135
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + ++V NLP V E +I E FK++G + S V+R R G AFV+F D+ +
Sbjct: 3 RETRHLWVGNLPEHVREEKIVEHFKRYGRVESV-KVLRKRGSEGGVAAFVDFVDIKSAQK 61
Query: 225 A 225
A
Sbjct: 62 A 62
>gi|126333639|ref|XP_001366127.1| PREDICTED: speckle targeted PIP5K1A-regulated poly(A) polymerase
[Monodelphis domestica]
Length = 857
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE+ A + ++SV+V P + ++++E F+ FG ++S VV+ KD G+ +A VE
Sbjct: 44 EELRATRRAQGLRSVFVSGFPRGLDPTQLSEYFQAFGPVAS--VVM--DKDKGV-FAIVE 98
Query: 216 FEDMTGVRNAV 226
D TG R+AV
Sbjct: 99 MGD-TGARDAV 108
>gi|24648528|ref|NP_732559.1| syncrip, isoform F [Drosophila melanogaster]
gi|23171812|gb|AAN13834.1| syncrip, isoform F [Drosophila melanogaster]
Length = 529
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 324 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 374
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 375 ---YAFIHFED 382
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D E+ + YV+NLP +++++ EF+ FG+++S V+ + FV +ED G
Sbjct: 247 DIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFVNYEDADGA 306
Query: 223 RNAVE 227
AVE
Sbjct: 307 HAAVE 311
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL SE ++ E F+ FG++ ++ KD
Sbjct: 249 WADPQEE----PDEQTMSKVKVLYVRNLTQDTSEEKLKESFEAFGKVER----VKKIKD- 299
Query: 208 GICYAFVEFEDMTGVRNAVE 227
YAFV FED NA++
Sbjct: 300 ---YAFVHFEDRDHAVNAMK 316
>gi|45551939|ref|NP_732557.2| syncrip, isoform A [Drosophila melanogaster]
gi|45446567|gb|AAN13832.2| syncrip, isoform A [Drosophila melanogaster]
Length = 563
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 358 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 408
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 409 ---YAFIHFED 416
>gi|24648520|ref|NP_732555.1| syncrip, isoform E [Drosophila melanogaster]
gi|23171808|gb|AAN13831.1| syncrip, isoform E [Drosophila melanogaster]
Length = 571
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++V NLP SV ++ EEF KFG++ S V++ Y FVEF D + AV+
Sbjct: 5 IFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAAVD 62
>gi|343475984|emb|CCD12779.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 230
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
++DE K + V L P V+ S++ E F +FGEL ++ + ++ Y FV F
Sbjct: 123 MQDERYRKQLIVNYLAPDVTSSDLHELFSRFGELDGARIIYDKQTNMSKGYGFVYFCHAE 182
Query: 221 GVRNAVE 227
+ A+E
Sbjct: 183 DAKEAME 189
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
E + +V+V+NL S ++ E+ E F FG+++S VV+R C+ FV FE+
Sbjct: 174 EQNGKFNNVFVKNLGESTTDDELKEVFGAFGKITS-AVVMRDSDGKSKCFGFVNFEN 229
>gi|442620153|ref|NP_001262779.1| syncrip, isoform M [Drosophila melanogaster]
gi|440217681|gb|AGB96159.1| syncrip, isoform M [Drosophila melanogaster]
Length = 699
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 358 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 408
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 409 ---YAFIHFED 416
>gi|442620147|ref|NP_001262777.1| syncrip, isoform J [Drosophila melanogaster]
gi|440217678|gb|AGB96157.1| syncrip, isoform J [Drosophila melanogaster]
Length = 761
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 155 GEEISAVEDE---EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI--RSRKDVGI 209
EE+ A E EE ++VRNLP S +E+++AE F + G+LS +V+ +RK G
Sbjct: 311 AEEVRAQTKEARIEETGRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVVDKATRKSKG- 369
Query: 210 CYAFVEFEDMTGVRNAVE 227
+A +++E++ A E
Sbjct: 370 -FALIQYEEVADAITAKE 386
>gi|195353891|ref|XP_002043435.1| GM23135 [Drosophila sechellia]
gi|194127576|gb|EDW49619.1| GM23135 [Drosophila sechellia]
Length = 745
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|442620157|ref|NP_001262781.1| syncrip, isoform O [Drosophila melanogaster]
gi|440217683|gb|AGB96161.1| syncrip, isoform O [Drosophila melanogaster]
Length = 611
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 366 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 416
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 417 ---YAFIHFED 424
>gi|442620163|ref|NP_001262784.1| syncrip, isoform R [Drosophila melanogaster]
gi|440217686|gb|AGB96164.1| syncrip, isoform R [Drosophila melanogaster]
Length = 569
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 324 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 374
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 375 ---YAFIHFED 382
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
Length = 181
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ FG L S V +RK G +AF+EF+D ++A+
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWV---ARKPPG--FAFIEFDDYRDAQDAI 55
Query: 227 E 227
+
Sbjct: 56 Q 56
>gi|442620145|ref|NP_001262776.1| syncrip, isoform I [Drosophila melanogaster]
gi|440217677|gb|AGB96156.1| syncrip, isoform I [Drosophila melanogaster]
Length = 603
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 358 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 408
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 409 ---YAFIHFED 416
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 155 GEEISAVEDEE--EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
G +S+V E E ++++ N+P + E+A F+ FG + S V + V C+
Sbjct: 340 GIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFG 399
Query: 213 FVEFEDMTGVRNAVEV 228
FV ++ +NA++V
Sbjct: 400 FVSYDSQAAAQNAIDV 415
>gi|413915907|gb|AFW55839.1| hypothetical protein ZEAMMB73_482663 [Zea mays]
gi|413915908|gb|AFW55840.1| hypothetical protein ZEAMMB73_482663 [Zea mays]
Length = 492
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 150 SWADT---GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
SWADT GE S + +KS+YV+NLP +V++ ++ + F+ GE++ V+ ++
Sbjct: 249 SWADTKNGGESASTAQ----VKSLYVKNLPKAVTQEQLKKLFEHLGEVTKV-VIPPAKAG 303
Query: 207 VGICYAFVEFEDMTGVRNAVE 227
Y FV F++ + A+E
Sbjct: 304 HENRYGFVHFKERSMAMKALE 324
>gi|297821775|ref|XP_002878770.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
gi|297324609|gb|EFH55029.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ +G + S V +R+ G YAF++FED R+A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWV---ARRPPG--YAFLDFEDSRDARDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|161078453|ref|NP_001097849.1| syncrip, isoform H [Drosophila melanogaster]
gi|158030319|gb|ABW08711.1| syncrip, isoform H [Drosophila melanogaster]
Length = 534
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 329 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 379
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 380 ---YAFIHFED 387
>gi|348507515|ref|XP_003441301.1| PREDICTED: msx2-interacting protein-like [Oreochromis niloticus]
Length = 133
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + ++V NLP V E +I E FK++G + S V+R R G AFV+F D+ +
Sbjct: 3 RETRHLWVGNLPEHVREEKIVEHFKRYGRVESV-KVLRKRGSEGGVAAFVDFVDIKSAQK 61
Query: 225 A 225
A
Sbjct: 62 A 62
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ +G L S V +RK G +AF+EFED +AV
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVLRS---VWVARKPPG--FAFIEFEDRRDAGDAV 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|255069811|gb|ACU00255.1| AT04629p [Drosophila melanogaster]
Length = 489
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 394 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 444
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 445 ---YAFIHFED 452
>gi|384245922|gb|EIE19414.1| hypothetical protein COCSUDRAFT_58700 [Coccomyxa subellipsoidea
C-169]
Length = 163
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+YV NLP S +E ++ EEF +FG L S V +RK G +AFVE+ED +AV
Sbjct: 5 IYVGNLPSSTAERDLEEEFIRFGTLRSVWV---ARKPPG--FAFVEYEDPRDADDAVR 57
>gi|448878290|gb|AGE46108.1| arginine/serine-rich splicing factor RSZ21 transcript IV [Sorghum
bicolor]
Length = 99
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ +YV NL P V+ E+ +EF+ FG L S V +RK G +AF++F+D +A+
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWV---ARKPPG--FAFIDFDDKRDAEDAI 55
Query: 227 EVCILM 232
+L+
Sbjct: 56 RALLLV 61
>gi|340052756|emb|CCC47040.1| putative RNA-binding protein TbRBP6 [Trypanosoma vivax Y486]
Length = 231
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
D+ K + V L P V+ +E+ E F +FGEL V+ + + Y FV F ++
Sbjct: 125 HDDRYHKQLIVNYLAPDVTSNELHELFSRFGELDGARVIYDRQTHMSKGYGFVYFSNVED 184
Query: 222 VRNAVE 227
++A E
Sbjct: 185 AKDAFE 190
>gi|449434905|ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor RSZ21-like [Cucumis sativus]
Length = 158
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VY+ NL P V+E ++ +EF+ FG L S V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWV---ARRPPG--YAFIEFDDRRDALDAI 55
Query: 227 EV 228
+
Sbjct: 56 QA 57
>gi|326501766|dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 682
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELS----SEGVVIRSRKDVGICYAFVEFEDMT 220
E++KSV++ LPP E ++ E+F KFGE+ + + RKD G F+ F
Sbjct: 276 EKVKSVFLDGLPPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFG----FISFT--- 328
Query: 221 GVRNAVEVCILM 232
R A CI M
Sbjct: 329 -TRQAALGCIDM 339
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+E +++YV NL PSVSE IA F + G ++ V+ D YAFVEF D +
Sbjct: 41 DEPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGAND---PYAFVEFLDHSQASQ 97
Query: 225 AVEVC 229
A++
Sbjct: 98 ALQTM 102
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E S V D ++YVRN P + +E ++ + F K+GE++S ++++S D G +AFV
Sbjct: 204 ERTSTVGDV--FTNLYVRNFPDTWTEDDLHQTFSKYGEITS--LLLKS-DDKGRRFAFVN 258
Query: 216 FEDMTGVRNAVE 227
F D + A+E
Sbjct: 259 FVDTNMAKAAME 270
>gi|395516962|ref|XP_003762652.1| PREDICTED: putative RNA-binding protein 15B [Sarcophilus harrisii]
Length = 689
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 134 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 192
Query: 216 FEDM 219
F+++
Sbjct: 193 FQNL 196
>gi|16565908|gb|AAL26312.1|AF364077_1 putative peptidyl prolyl cis-trans isomerase [Ogataea angusta]
Length = 301
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
K +++ L P +E ++ F++FGE++S ++ R +CY F+EF + + V A
Sbjct: 212 KVLFICKLNPVTAEDDLRLIFQRFGEITSVEIIRDRRTGHSLCYGFIEFTNKSAVERA 269
>gi|161078446|ref|NP_732558.2| syncrip, isoform C [Drosophila melanogaster]
gi|16197897|gb|AAL13706.1| GH28335p [Drosophila melanogaster]
gi|158030317|gb|AAN13833.2| syncrip, isoform C [Drosophila melanogaster]
gi|220945692|gb|ACL85389.1| CG17838-PC [synthetic construct]
gi|220955464|gb|ACL90275.1| CG17838-PC [synthetic construct]
Length = 529
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 324 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 374
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 375 ---YAFIHFED 382
>gi|380797055|gb|AFE70403.1| putative RNA-binding protein 15B, partial [Macaca mulatta]
Length = 683
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 118 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 176
Query: 216 FEDM 219
F+++
Sbjct: 177 FQNL 180
>gi|407860731|gb|EKG07463.1| hypothetical protein TCSYLVIO_001404 [Trypanosoma cruzi]
Length = 601
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS-VYVRNL 175
P+VS + P+ V QQ A D G S + ++EI+S ++V L
Sbjct: 185 PAVSSTLEPLVVCGGVSPQQPQQPFDMPIAGITPEGDAGNSQSRRDPQDEIRSNLFVSGL 244
Query: 176 PPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDMTGVRNAVE 227
SV+++E+ + F FGE+ S V+ I + K GI AFV+F+++ A E
Sbjct: 245 HASVTDNELYKHFHLFGEIESAKVMLDIHTGKSRGI--AFVKFKEVANAEKAAE 296
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++YV NLPP V E E+ + F K+G++ + V +++R +AFV+F+ + AV
Sbjct: 8 TIYVGNLPPDVREKEVEDLFHKYGDIRN--VEVKTRHGETHSFAFVQFDSHRDAKEAVR 64
>gi|432092448|gb|ELK25063.1| Putative RNA-binding protein 15B [Myotis davidii]
Length = 649
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 82 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 140
Query: 216 FEDM 219
F+++
Sbjct: 141 FQNL 144
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E + D+ +VYV+NL + +E ++ + F +FG ++S V+R C+ FV
Sbjct: 207 QERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITST-AVMRDADGKSKCFGFVN 265
Query: 216 FEDMTGVRNAVEVC 229
F+D +VE
Sbjct: 266 FDDPDDAARSVEAL 279
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++YV NLP +VSE ++ + F +FG++ S +++ + FVE D R A+E
Sbjct: 2 NIYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEA 61
Query: 229 C 229
Sbjct: 62 M 62
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++RNLP S++ +++ EFKKFGE+ + + + YAFVE+ D A+
Sbjct: 41 CLHIRNLPDSITYNDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNE 100
Query: 229 C--ILMW 233
IL+W
Sbjct: 101 MHGILLW 107
>gi|281202378|gb|EFA76583.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 309
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 157 EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
I E+ ++ K ++V NLP +E+ + F KFG L++ V + YAFVEF
Sbjct: 183 HIMDQEERDKSKCLFVGNLPYHFNETHLTSLFGKFGTLANVNVGFDRKTGHNKGYAFVEF 242
Query: 217 EDMTGVRNAVE 227
E T A +
Sbjct: 243 ESKTDAEEAFK 253
>gi|242014017|ref|XP_002427695.1| cytoplasmic polyadenylation element binding protein, putative
[Pediculus humanus corporis]
gi|212512125|gb|EEB14957.1| cytoplasmic polyadenylation element binding protein, putative
[Pediculus humanus corporis]
Length = 658
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMT 220
+E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 396 NERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDES 455
Query: 221 GVRNAVEVCI 230
V+ +E CI
Sbjct: 456 SVQQLIEACI 465
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
S+ E S+YV +L PSVSE+ + + F G +SS V + + YA+V F D
Sbjct: 31 SSATTENSSASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFND 90
Query: 219 MTGVRNAVE----------VCILMW 233
+ A+E +C +MW
Sbjct: 91 HEAGKKAIEKLNYTPIKGRLCRIMW 115
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVR 223
E I +YV NLP VS ++ EF+K+G + V +K V G +AF+EFED
Sbjct: 5 ESISRIYVGNLPSHVSPRDVENEFRKYGNILKCDV----KKTVSGAAFAFIEFEDARDAA 60
Query: 224 NAVE 227
+A++
Sbjct: 61 DAIK 64
>gi|297713191|ref|XP_002833087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Pongo abelii]
Length = 339
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 12/67 (17%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV--- 226
V++R L V E+++ E+ ++FG +SS V+ + R+ A VEFED+ G NAV
Sbjct: 114 VHIRGLIEGVVEADLVEDLQEFGPISSVVVMPKKRQ------ALVEFEDVLGACNAVSYA 167
Query: 227 ---EVCI 230
++CI
Sbjct: 168 ADNQICI 174
>gi|355746671|gb|EHH51285.1| hypothetical protein EGM_10631, partial [Macaca fascicularis]
Length = 597
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 32 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 90
Query: 216 FEDM 219
F+++
Sbjct: 91 FQNL 94
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 157 EISAVEDEEEIK---SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAF 213
E +A ++E++I+ +Y+RNL V+E EI E+F K G L V ++ G +AF
Sbjct: 287 ETAAPDEEDKIRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADSKGKGFAF 346
Query: 214 VEFED 218
V+F++
Sbjct: 347 VQFQN 351
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+VYV+NLP +++ E+ + F K+G++SS VV++ + + FV FE A
Sbjct: 236 RFTNVYVKNLPKEITDDELKKTFGKYGDISS-AVVMKDQSGNSRSFGFVNFESPEAAAVA 294
Query: 226 VE 227
VE
Sbjct: 295 VE 296
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVR 223
+++ +Y+ NLP S+ E+ EEF+KFG + + +K G +AF+EF D R
Sbjct: 4 DDLSRIYIGNLPEDCSQRELEEEFEKFGRI----IYCELKKSYSGSPFAFIEFSDSRDAR 59
Query: 224 NAV 226
+A+
Sbjct: 60 DAI 62
>gi|351711931|gb|EHB14850.1| Putative RNA-binding protein 15B [Heterocephalus glaber]
Length = 632
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 67 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 125
Query: 216 FEDM 219
F+++
Sbjct: 126 FQNL 129
>gi|123407356|ref|XP_001302991.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884332|gb|EAX90061.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 477
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
K V+V +LP SV E+ I E FK +G S V ++ K + +AFV FE + A+
Sbjct: 6 KEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAI 64
>gi|302780048|ref|XP_002971799.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
gi|300160931|gb|EFJ27548.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
Length = 229
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ FG L S V +RK G +AF+EF+D ++A+
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWV---ARKPPG--FAFIEFDDYRDAQDAI 55
Query: 227 E 227
+
Sbjct: 56 Q 56
>gi|344231865|gb|EGV63744.1| hypothetical protein CANTEDRAFT_97802 [Candida tenuis ATCC 10573]
Length = 207
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE-DMTGVRNAVEV 228
++V NLP VSE+E+A+ FK +S+ +R RKD GI AF+EF+ D +++ +E
Sbjct: 81 LFVGNLPYDVSETELAKHFK-----NSKPDRMRIRKDKGI--AFLEFDNDTREIQSKMES 133
Query: 229 CILMWH 234
+ M H
Sbjct: 134 ALRMHH 139
>gi|194744098|ref|XP_001954532.1| GF16693 [Drosophila ananassae]
gi|190627569|gb|EDV43093.1| GF16693 [Drosophila ananassae]
Length = 710
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEHFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|357122936|ref|XP_003563169.1| PREDICTED: uncharacterized protein LOC100842213 [Brachypodium
distachyon]
Length = 691
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELS----SEGVVIRSRKDVGICYAFVEFEDMT 220
E++KSV++ LPP E ++ E+F KFGE+ + + RKD G F+ F
Sbjct: 284 EKVKSVFLDGLPPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFG----FISFT--- 336
Query: 221 GVRNAVEVCILM 232
R A CI M
Sbjct: 337 -TRQAAIDCIDM 347
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ + +++R+ G +AFVEFED +AV
Sbjct: 11 IYVGNLPPDIRTKDIEDLFYKFGKIAY--IDLKNRR--GPPFAFVEFEDPRDAEDAVHA 65
>gi|426249916|ref|XP_004018692.1| PREDICTED: putative RNA-binding protein 15B, partial [Ovis aries]
Length = 612
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 48 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 106
Query: 216 FEDM 219
F+++
Sbjct: 107 FQNL 110
>gi|342183555|emb|CCC93035.1| poly(A)-binding protein 1 [Trypanosoma congolense IL3000]
Length = 557
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++YV+N +V+ ++ E F++FGE S V++ V C+ FV F++ + A++
Sbjct: 289 NLYVKNFDDTVTSEKLKELFERFGETVSVSVMMDKATQVSRCFGFVSFKEQSAASQAIQ 347
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 164 EEEIK---SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG----ICYAFVEF 216
EE++K ++YV+NL PSV + ++ E F KFGE++S V +D+G + +A+V +
Sbjct: 177 EEQLKQYTNLYVKNLDPSVDDEKLKEVFAKFGEVTSAKV-----RDLGNNSSVGFAYVAY 231
Query: 217 EDMTGVRNAVE 227
AVE
Sbjct: 232 ATHEAAAKAVE 242
>gi|219887691|gb|ACL54220.1| unknown [Zea mays]
gi|413937734|gb|AFW72285.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286701|gb|AGC79942.1| arginine/serine-rich splicing factor RSZ28V [Zea mays]
Length = 231
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|195569361|ref|XP_002102678.1| GD19374 [Drosophila simulans]
gi|194198605|gb|EDX12181.1| GD19374 [Drosophila simulans]
Length = 350
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL VSE ++ E+F+++G++ ++ KD
Sbjct: 104 WADPQEE----PDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD- 154
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 155 ---YAFIHFED 162
>gi|19075873|ref|NP_588373.1| RNA-binding protein, rrm type [Schizosaccharomyces pombe 972h-]
gi|6136683|sp|O13674.1|MUG24_SCHPO RecName: Full=Meiotically up-regulated gene 24 protein
gi|4239669|emb|CAA20839.1| RNA-binding protein, rrm type [Schizosaccharomyces pombe]
Length = 654
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++V++ NLP S E EI E F KFG++ E + I S+K++ AFV F +R+A++
Sbjct: 299 RNVFIGNLPSSYHEKEIEEAFGKFGKI--EHIKILSKKNI----AFVHF---LNIRDAIK 349
Query: 228 V 228
V
Sbjct: 350 V 350
>gi|356526819|ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 176
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF+ +G L S V +R+ G YAF+EF+D +A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRIYGVLRS---VWVARRPPG--YAFIEFDDRRDALDAI 55
Query: 227 EV 228
+
Sbjct: 56 QA 57
>gi|397496175|ref|XP_003818918.1| PREDICTED: putative RNA-binding protein 15B [Pan paniscus]
Length = 552
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 164 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 222
Query: 216 FEDM 219
F+++
Sbjct: 223 FQNL 226
>gi|195113079|ref|XP_002001097.1| GI10594 [Drosophila mojavensis]
gi|193917691|gb|EDW16558.1| GI10594 [Drosophila mojavensis]
Length = 721
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL V+E ++ E+F+++G++ ++ KD
Sbjct: 383 WADPQEE----PDEQTMSKVKVLYVRNLTQDVTEDKLKEQFEQYGKVER----VKKIKD- 433
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 434 ---YAFIHFED 441
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + VYV NLP V E E+ + F K+G + + I+S + G +AFVEFED +A
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRIKY--IDIKSGR--GPAFAFVEFEDHRDAEDA 62
Query: 226 V 226
V
Sbjct: 63 V 63
>gi|195390987|ref|XP_002054147.1| GJ22950 [Drosophila virilis]
gi|194152233|gb|EDW67667.1| GJ22950 [Drosophila virilis]
Length = 789
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL V+E ++ E+F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVTEDKLKEQFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VYV NLPP V E ++ + F K+G + V +++R+ G +AFVEFED ++V
Sbjct: 11 VYVGNLPPDVREKDVEDLFYKYGSIRH--VNLKNRR--GPPFAFVEFEDRRDAEDSVH 64
>gi|240279975|gb|EER43479.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus H143]
Length = 534
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 153 DTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
D G++I VEDE +V++RNLP + ++ + E F +FG L VV+ + D
Sbjct: 296 DAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGT 355
Query: 212 AFVEF 216
AFV F
Sbjct: 356 AFVCF 360
>gi|448878276|gb|AGE46101.1| arginine/serine-rich splicing factor RSZ28 transcript I [Sorghum
bicolor]
gi|448878278|gb|AGE46102.1| arginine/serine-rich splicing factor RSZ28 transcript II [Sorghum
bicolor]
gi|448878280|gb|AGE46103.1| arginine/serine-rich splicing factor RSZ28 transcript III [Sorghum
bicolor]
gi|448878282|gb|AGE46104.1| arginine/serine-rich splicing factor RSZ28 transcript IV [Sorghum
bicolor]
Length = 246
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRTFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRN 224
+I +Y+ NLP S+ E+ EEF+KFG + + +K G +AF+EF D R+
Sbjct: 5 DISRIYIGNLPEDCSQRELEEEFEKFGRI----IYCDLKKSYSGSPFAFIEFSDSRDARD 60
Query: 225 AVE 227
A+
Sbjct: 61 AIR 63
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
+ D + ++++V LP +V+E E+ +EF +FGE+ VV + Y F+ F+D
Sbjct: 95 IADSDPYRTIFVGRLPFAVTEVELQKEFVRFGEIEKVRVVRDKTSNKSRGYGFIMFKDEI 154
Query: 221 GVRNAVE 227
R+A
Sbjct: 155 SARSACR 161
>gi|156347048|ref|XP_001621619.1| hypothetical protein NEMVEDRAFT_v1g144256 [Nematostella vectensis]
gi|156207744|gb|EDO29519.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 37/59 (62%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++++ +LP +++++ + F+ FG + S V I + ++ C+ FV ++++ +NA++
Sbjct: 75 NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 133
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
+ + +YV NLP V+ ++ EF+KFG + V +K V G +AF+EFED
Sbjct: 4 RDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|340056243|emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypanosoma vivax Y486]
Length = 482
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI----RSRKDVGICYAFVEFEDMTGVRN 224
+++V+NL V E++ FK+FGE+ S V+ RSR Y FV F+D T +N
Sbjct: 16 NIFVKNLKGEVDSRELSVIFKRFGEILSCKVMSDEGGRSRG-----YGFVHFKDDTAAKN 70
Query: 225 AVE 227
A+E
Sbjct: 71 AIE 73
>gi|195649571|gb|ACG44253.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 255
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|194688308|gb|ACF78238.1| unknown [Zea mays]
gi|194701410|gb|ACF84789.1| unknown [Zea mays]
gi|219886269|gb|ACL53509.1| unknown [Zea mays]
gi|223943153|gb|ACN25660.1| unknown [Zea mays]
gi|224028603|gb|ACN33377.1| unknown [Zea mays]
gi|238011236|gb|ACR36653.1| unknown [Zea mays]
gi|413937729|gb|AFW72280.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413937730|gb|AFW72281.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413937731|gb|AFW72282.1| splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413937732|gb|AFW72283.1| splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|413937733|gb|AFW72284.1| splicing factor, arginine/serine-rich 7 isoform 5 [Zea mays]
gi|443286693|gb|AGC79938.1| arginine/serine-rich splicing factor RSZ28I [Zea mays]
gi|443286695|gb|AGC79939.1| arginine/serine-rich splicing factor RSZ28II [Zea mays]
gi|443286697|gb|AGC79940.1| arginine/serine-rich splicing factor RSZ28III [Zea mays]
Length = 253
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED +AV
Sbjct: 10 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRR--GPPFAFVEFEDPRDADDAVHA 64
>gi|443286703|gb|AGC79943.1| arginine/serine-rich splicing factor RSZ28VI [Zea mays]
Length = 185
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 155 GEEISAVEDEEEI-------KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
G IS E E ++ ++YV+N+P V++ E+++ F K+G ++S V+ R
Sbjct: 189 GHHISRKERESKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITS-CVITRDDDGT 247
Query: 208 GICYAFVEFEDMTGVRNAVE 227
+ FV FE +NAV+
Sbjct: 248 SKGFGFVNFEKHQDAQNAVD 267
>gi|348670466|gb|EGZ10288.1| hypothetical protein PHYSODRAFT_361940 [Phytophthora sojae]
Length = 409
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++V N+PP + SE+ + F +FGE+ + V+ ++R D + AFV+F D+ + A
Sbjct: 132 NLFVANIPPHIKMSELDQAFAQFGEVKNVKVLPQARPDAPMS-AFVDFSDVASAQKAHSA 190
Query: 229 CILM 232
I++
Sbjct: 191 TIIV 194
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+ ++ E + S+YV L PSV+ES++ E F G++S+ V + + YA+V F+
Sbjct: 39 STQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSH 98
Query: 220 TGVRNAVE----------VCILMW 233
A+E C +MW
Sbjct: 99 ADGEKALEELNYTPIKGKACRIMW 122
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++YV NLP ++SE ++ + F +FGE++S ++ + FVE D R A+E
Sbjct: 2 NIYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIE 60
>gi|66826895|ref|XP_646802.1| hypothetical protein DDB_G0270436 [Dictyostelium discoideum AX4]
gi|60474631|gb|EAL72568.1| hypothetical protein DDB_G0270436 [Dictyostelium discoideum AX4]
Length = 521
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
++ E +I +V+V+ LP + SE E+ + F++FGE+ + V++ + + Y FV F
Sbjct: 14 LDSEVDICNVFVKYLPCNFSEKELYDLFEQFGEIVNTKVMVNIKTGNSLGYGFVRF 69
>gi|154270523|ref|XP_001536116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409920|gb|EDN05308.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 633
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 153 DTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
D G++I VEDE +V++RNLP + ++ + E F +FG L VV+ + D
Sbjct: 251 DAGKKIDEDVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGT 310
Query: 212 AFVEF 216
AFV F
Sbjct: 311 AFVCF 315
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
+ + +YV NLP V+ ++ EF+KFG + V +K V G +AF+EFED
Sbjct: 4 RDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S+YV L PSVSE+ + + F G +SS V + + + YA+V F D R A+E
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 229 ----------CILMW 233
C +MW
Sbjct: 99 LNYTLIKGKPCRIMW 113
>gi|198450702|ref|XP_002137140.1| GA27045, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131152|gb|EDY67698.1| GA27045, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 674
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL V+E ++ E+F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVTEEKLKEQFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF+ +G L S V +R+ G YAFVEF+D R+AV
Sbjct: 1 MARVYVGNLDPRVSERDLEDEFRMYGVLRS---VWVARRPPG--YAFVEFDDR---RDAV 52
Query: 227 EV 228
+
Sbjct: 53 DA 54
>gi|301114008|ref|XP_002998774.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112075|gb|EEY70127.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++V N+PP + SE+ + F +FGE+ + V+ ++R D + AFV++ D++ + A
Sbjct: 117 NLFVANIPPHIKMSELDQAFAQFGEVKNVKVLPQARPDAPMS-AFVDYTDISSAQKAHSA 175
Query: 229 CILM 232
I++
Sbjct: 176 TIIV 179
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
VYV NLPP + +I + F K+G+++ + +++R+ G +AFVEFED +AV
Sbjct: 9 VYVGNLPPDIRTKDIEDLFHKYGKITF--IDLKNRR--GPPFAFVEFEDPRDAEDAV 61
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D+ + +VYV+NL + +E ++ + F ++G ++S VV+R C+ FV FE+
Sbjct: 203 DKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITS-AVVMRDGDGKSRCFGFVNFENPDDA 261
Query: 223 RNAVEVC 229
+VE
Sbjct: 262 ARSVEAL 268
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 128 DWNHVPQPTTQQETVSSY-------------------AYEKSWADTGEEISAVEDEEEIK 168
+ H P+P ++E ++S+ A EK+ A EI ++ +
Sbjct: 252 ELTHRPKPPEKEEPIASHEDKPEVEDDTPQPISGGGAATEKTEAQVSTEIESIR---QTG 308
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++RNLP VSE ++ + F FG L V + ++ G +A+V FE+ A E
Sbjct: 309 RLFLRNLPYDVSEDDLRDYFNSFGTLEEVHVPLDAKTGSGKGFAYVLFEESNDAVRAYE 367
>gi|242022170|ref|XP_002431514.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
gi|212516808|gb|EEB18776.1| hypothetical protein Phum_PHUM533900 [Pediculus humanus corporis]
Length = 599
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP S++++A F FG + S V I ++ C+ FV ++++ ++A++
Sbjct: 515 NLFIYHLPQEFSDADLATTFHSFGNVISAKVFIDKMTNLSKCFGFVSYDNVLSAQSAIQA 574
>gi|157118464|ref|XP_001659119.1| hypothetical protein AaeL_AAEL008317 [Aedes aegypti]
gi|108875701|gb|EAT39926.1| AAEL008317-PA [Aedes aegypti]
Length = 91
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
V+V NLP +V E+ F +FG++S V+ R + Y FV F+ T + N
Sbjct: 17 VFVGNLPWTVGHRELRNYFGQFGKISWAQVIFDRRTGLSKGYGFVAFQKRTALEN 71
>gi|261326987|emb|CBH09962.1| RNA-binding protein RBP6, putative [Trypanosoma brucei gambiense
DAL972]
Length = 241
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
++D+ K + V L P V+ +++ E F +FGEL ++ + ++ Y FV F
Sbjct: 134 LQDDRYRKQLIVNYLAPDVTSTDLHELFSRFGELDGARIIYDKQTNMSKGYGFVYFCHAE 193
Query: 221 GVRNAVE 227
+ AVE
Sbjct: 194 DAKEAVE 200
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI--RSRKDVGICYAFVEFEDMTGVRNAV 226
S+YVRNL P ++ F K+G ++ + + +R+ G CY ++ FED+ +A+
Sbjct: 11 SIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYITFEDIRDAEDAL 70
>gi|72386923|ref|XP_843886.1| RNA-binding protein RBP6 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359014|gb|AAX79463.1| RNA-binding protein RBP6, putative [Trypanosoma brucei]
gi|70800418|gb|AAZ10327.1| RNA-binding protein RBP6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 239
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
++D+ K + V L P V+ +++ E F +FGEL ++ + ++ Y FV F
Sbjct: 132 LQDDRYRKQLIVNYLAPDVTSTDLHELFSRFGELDGARIIYDKQTNMSKGYGFVYFCHAE 191
Query: 221 GVRNAVE 227
+ AVE
Sbjct: 192 DAKEAVE 198
>gi|2582643|emb|CAA05351.1| RSZp21 protein [Arabidopsis thaliana]
Length = 184
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EFK FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWV---ARRPPG--YAFLEFDDERDALDAI 55
>gi|158288347|ref|XP_310221.4| AGAP009477-PA [Anopheles gambiae str. PEST]
gi|157019207|gb|EAA05917.4| AGAP009477-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 36/60 (60%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP +++++A F FG + S V I + ++ C+ FV F++++ + A++
Sbjct: 289 NLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDNVSSAQAAIQA 348
>gi|158293126|ref|XP_001688575.1| AGAP010495-PA [Anopheles gambiae str. PEST]
gi|157016809|gb|EDO64018.1| AGAP010495-PA [Anopheles gambiae str. PEST]
Length = 56
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEFED
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTF--VDLKNRR--GPPFAFVEFED 54
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI-----CYAFVEFEDMTGV 222
++VYV NLP + E E+ F K+G + +R D+ + CYAFV F+D
Sbjct: 60 RTVYVGNLPGDIREREVKHLFMKYGHI--------TRIDLKVPPRPPCYAFVVFKDALNA 111
Query: 223 RNAVEVC 229
+A+ C
Sbjct: 112 DDAICEC 118
>gi|325088692|gb|EGC42002.1| ribosome biogenesis [Ajellomyces capsulatus H88]
Length = 699
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 153 DTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
D G++I VEDE +V++RNLP + ++ + E F +FG L VV+ + D
Sbjct: 263 DAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGT 322
Query: 212 AFVEF 216
AFV F
Sbjct: 323 AFVCF 327
>gi|9369411|gb|AAF87159.1|AC002423_24 T23E23.2 [Arabidopsis thaliana]
Length = 183
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EFK FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRN---VWVARRPPG--YAFLEFDDERDALDAI 55
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG +S ++ + K
Sbjct: 132 ERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVSEVVMIYDAEKQR 191
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 192 PRGFGFITFEDQQSVDQAVNM 212
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+ +++V+NLP S + E F++FGE+ S V+ + C+ F+ F++
Sbjct: 179 KHFTNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEA 238
Query: 225 AVEV 228
AVE+
Sbjct: 239 AVEI 242
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
+ + +YV NLP V+ ++ EF+KFG + V +K V G +AF+EFED
Sbjct: 4 RDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|395852618|ref|XP_003798832.1| PREDICTED: speckle targeted PIP5K1A-regulated poly(A) polymerase
[Otolemur garnettii]
Length = 861
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 157 EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
E+ A + ++SV+V P V ++++E F+ FG ++S VV+ KD G+ +A VE
Sbjct: 45 ELRAARKAQGLRSVFVSGFPRDVDSAQLSEYFQAFGPVAS--VVM--DKDKGV-FAIVEM 99
Query: 217 EDMTGVRNAV 226
DM G R A+
Sbjct: 100 GDM-GAREAI 108
>gi|326679167|ref|XP_003201252.1| PREDICTED: msx2-interacting protein [Danio rerio]
Length = 3426
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S V+ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|334182802|ref|NP_001185074.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192322|gb|AEE30443.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 183
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EFK FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRN---VWVARRPPG--YAFLEFDDERDALDAI 55
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
++Y+ L P V++ ++AE F KFGEL +++ + C FV F +
Sbjct: 802 NLYINRLEPHVTKEDLAEAFSKFGELVETRILMDLNTNTSRCVGFVHFSN 851
>gi|221056122|ref|XP_002259199.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809270|emb|CAQ39972.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVGICYAFVEFEDMTGVRNAVE 227
VYV N+P S ++ EI + F++FG+++ G+ I+ +R G YAF+E+E+ + V+
Sbjct: 10 VYVGNIPGSTTKEEIIKAFQEFGKIT--GIDIKYNRNANGTNYAFIEYENYESAKKTVQ 66
>gi|410899030|ref|XP_003963000.1| PREDICTED: msx2-interacting protein-like [Takifugu rubripes]
Length = 3475
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S V+ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|357617562|gb|EHJ70861.1| hypothetical protein KGM_04943 [Danaus plexippus]
Length = 668
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL ++E + EEF+++G + ++ KD
Sbjct: 377 WADPQEE----PDEQTMSKVKVLYVRNLTQEITEEALKEEFERYGNVER----VKKIKD- 427
Query: 208 GICYAFVEFED 218
YAFV FED
Sbjct: 428 ---YAFVHFED 435
>gi|224144714|ref|XP_002325387.1| predicted protein [Populus trichocarpa]
gi|222862262|gb|EEE99768.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF+ +G L S V +R+ G YAFVEF+D +A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWV---ARRPPG--YAFVEFDDRRDAIDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|444513559|gb|ELV10405.1| Putative RNA-binding protein 15B [Tupaia chinensis]
Length = 564
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+YV NLPP + +I F++FG++ + V +++RK G +AFVEFED +AV
Sbjct: 12 IYVGNLPPDIRSRDIESCFERFGKVVA--VDLKNRK--GPPFAFVEFEDARDAEDAVR 65
>gi|118794756|ref|XP_321714.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|347965857|ref|XP_003435823.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|347965859|ref|XP_003435824.1| AGAP001419-PD [Anopheles gambiae str. PEST]
gi|116116446|gb|EAA43192.3| AGAP001419-PA [Anopheles gambiae str. PEST]
gi|333470321|gb|EGK97588.1| AGAP001419-PB [Anopheles gambiae str. PEST]
gi|333470323|gb|EGK97590.1| AGAP001419-PD [Anopheles gambiae str. PEST]
Length = 532
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL SE ++ E F++FG + ++ KD
Sbjct: 328 WADPQEE----PDEQTMSKVKVLYVRNLTQDTSEEKLKESFEQFGRVER----VKKIKD- 378
Query: 208 GICYAFVEFED 218
YAFV FED
Sbjct: 379 ---YAFVHFED 386
>gi|47222777|emb|CAG01744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2703
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + ++V NLP +V E +I E FK++G + S V+ + + G+ AFV+F D+ +
Sbjct: 3 RETRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVA-AFVDFVDIKSAQK 61
Query: 225 A 225
A
Sbjct: 62 A 62
>gi|22330903|ref|NP_187381.2| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|332640997|gb|AEE74518.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 1294
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++ V+NLP + + + + FK+FGE+ GV +R+++ Y FVEF++ + A++
Sbjct: 1077 AICVKNLPLNATIALVENAFKQFGEIRRGGVEVRNKRS--FSYGFVEFKEENAAQRAIKA 1134
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 145 YAYEK-----SWADTG----EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELS 195
YAY K + ADTG ++ A+ ++ I+ V++LPP+ + + + FK+FG +
Sbjct: 521 YAYNKNIKADAGADTGNGNSQDSQAITEDAHIR---VKDLPPNATVALVESVFKQFGPIK 577
Query: 196 SEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
+ + + + YAFVEFE+ + A++ L
Sbjct: 578 KGRIRVINPANSNYWYAFVEFEEADAAKRAIQASPL 613
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 149 KSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
K + + G + E +V+V+NLPP+V+ + FK+FG + GV + S + VG
Sbjct: 1177 KDYGNKGGNENNQEPRALYAAVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQV-SNRGVG 1235
Query: 209 ICYAFVEFEDMTGVRNAVEVCILM 232
+ V+F AV +L+
Sbjct: 1236 NWFGNVKFVHAAAAERAVNPQVLL 1259
>gi|225560420|gb|EEH08701.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus G186AR]
Length = 740
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 153 DTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
D G++I VEDE +V++RNLP + ++ + E F +FG L VV+ + D
Sbjct: 305 DAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGT 364
Query: 212 AFVEF 216
AFV F
Sbjct: 365 AFVCF 369
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + E F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|430812050|emb|CCJ30505.1| unnamed protein product [Pneumocystis jirovecii]
Length = 628
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
AV+ ++VY+ NLP +++E EI E+ KFG + I+ K+ GI FV F ++
Sbjct: 213 AVQQSGATRNVYLGNLPENITEEEIREDLSKFGTIDQ----IKIIKNKGI--GFVHFLNI 266
Query: 220 TGVRNAVE 227
+ AV+
Sbjct: 267 SNAMKAVQ 274
>gi|37589116|gb|AAH52180.1| RNA binding motif protein 15B [Mus musculus]
Length = 564
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ +V+++NL SV + + E F FG++ S VV R G YAFV F++ + A+
Sbjct: 235 VGNVFIKNLDRSVDDKALFERFSAFGKILSSKVVSDERGSRG--YAFVHFQEQSAADRAI 292
Query: 227 E 227
E
Sbjct: 293 E 293
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
+ + +VYV+NL S ++ E+ + F ++G ++S V++R C+ FV FE+
Sbjct: 208 KTKFNNVYVKNLSESTTDEELMKFFGEYGTITS-AVIMRDADGKSRCFGFVNFENPDDAA 266
Query: 224 NAVE 227
AVE
Sbjct: 267 KAVE 270
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + ESEI + F K+G + + I R CY FVEFE+ +A+
Sbjct: 7 RTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPP---CYCFVEFENARDAEDAIR 63
>gi|195055139|ref|XP_001994478.1| GH17270 [Drosophila grimshawi]
gi|193892241|gb|EDV91107.1| GH17270 [Drosophila grimshawi]
Length = 532
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL V+E ++ E+F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVTEDKLKEQFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
+ + +YV NLP V+ ++ EF+KFG + V +K V G +AF+EFED
Sbjct: 4 RDSVSRIYVGNLPSHVTSRDVENEFRKFGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group]
Length = 465
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQE------TVSSYAYEKSWADTGEEISAVEDEEEIKSV 170
PS ++ V +NH +Q+ V SWA+ + ++K++
Sbjct: 223 PSRNRGFLFVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTI 282
Query: 171 YVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAVE 227
YV+NLP + S+ +I E F+K GE++ VV+ KD + FV F + + AV+
Sbjct: 283 YVKNLPENASKEKIKEIFEKHGEVTK--VVLPPAKDGHKRDFGFVHFAERSSALKAVK 338
>gi|354476449|ref|XP_003500437.1| PREDICTED: putative RNA-binding protein 15B-like [Cricetulus
griseus]
gi|344252785|gb|EGW08889.1| Putative RNA-binding protein 15B [Cricetulus griseus]
Length = 564
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E D+ +V+V+NL + +E ++ + F +FG ++S VV+R C+ FV
Sbjct: 192 QERDTATDKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSV-VVMRDGDGKSRCFGFVN 250
Query: 216 FED 218
FE+
Sbjct: 251 FEN 253
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 37/59 (62%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++++ +LP +++++ + F+ FG + S V I + ++ C+ FV ++++ +NA++
Sbjct: 371 NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 429
>gi|57997108|emb|CAD38547.2| hypothetical protein [Homo sapiens]
gi|190689771|gb|ACE86660.1| RNA binding motif protein 15B protein [synthetic construct]
gi|190691137|gb|ACE87343.1| RNA binding motif protein 15B protein [synthetic construct]
Length = 563
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|186478807|ref|NP_001117342.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192321|gb|AEE30442.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 164
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EFK FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRN---VWVARRPPG--YAFLEFDDERDALDAI 55
>gi|149018628|gb|EDL77269.1| rCG25263 [Rattus norvegicus]
Length = 564
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|141795846|gb|AAI39837.1| RBM15B protein [Homo sapiens]
Length = 563
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|431913468|gb|ELK15143.1| Putative RNA-binding protein 15B [Pteropus alecto]
Length = 562
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 4 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 60
>gi|75773735|gb|AAI04621.1| RBM15B protein [Bos taurus]
Length = 560
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
+D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++F+++
Sbjct: 1 DDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLKFQNL 57
>gi|18395314|ref|NP_564208.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|42571621|ref|NP_973901.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|75318747|sp|O81127.1|RZP21_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=At-RSZ21; Short=At-RSZp21
gi|3435096|gb|AAD12770.1| SRZ21 [Arabidopsis thaliana]
gi|222424570|dbj|BAH20240.1| AT1G23860 [Arabidopsis thaliana]
gi|332192319|gb|AEE30440.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192320|gb|AEE30441.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 187
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EFK FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWV---ARRPPG--YAFLEFDDERDALDAI 55
>gi|89266789|emb|CAJ83546.1| spen homolog, transcriptional regulator (Drosophila) [Xenopus
(Silurana) tropicalis]
Length = 292
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + ++V NLP +V + +I E FK++G + S ++ + D G+ AFV+F D+ +
Sbjct: 3 RETRHLWVGNLPENVRDEKIIEHFKRYGRVESVKILPKRGSDGGVA-AFVDFVDIKSAQK 61
Query: 225 AVEVCILM 232
A M
Sbjct: 62 AHNAVNKM 69
>gi|413924827|gb|AFW64759.1| hypothetical protein ZEAMMB73_682858 [Zea mays]
Length = 509
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWAD + S ++KS+YV+NLP +V++ ++ + F+ GE++ V+ ++
Sbjct: 267 SWADH-KNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKV-VIPPAKSGHEN 324
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F++ + V A++
Sbjct: 325 RYGFVHFKERSMVMKALK 342
>gi|363751515|ref|XP_003645974.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889609|gb|AET39157.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 131 HVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKK 190
VP P + + SY + A GE DE ++VR P V ESE+ E F
Sbjct: 4 EVPPPPAEYQAPESYGSDAYGAQPGEA-----DELSTTRLFVRPFPLDVQESELNEIFSP 58
Query: 191 FGELSSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNAV 226
FG L KDV I +AFVEFE A+
Sbjct: 59 FGAL----------KDVKILNGFAFVEFEQAEAAEQAI 86
>gi|442761475|gb|JAA72896.1| Putative rna-binding protein etr-3 rrm superfamily, partial [Ixodes
ricinus]
Length = 129
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 38/69 (55%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
A+ E ++++ +LP ++S++A+ F FG + S V I + ++ C+ FV +++
Sbjct: 36 ALHTGPEGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNS 95
Query: 220 TGVRNAVEV 228
+ A++
Sbjct: 96 LSAQAAIQA 104
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WA G +A ED V+V +L P V+++ +A+ F FG LS V+
Sbjct: 88 NWAYQGS--TAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSR 145
Query: 210 CYAFVEFEDMTGVRNAVEVCILMW 233
Y F+ F D T A+ W
Sbjct: 146 GYGFLAFRDKTDAEQAIATMNGEW 169
>gi|390177341|ref|XP_003736348.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859003|gb|EIM52421.1| GA27045, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 483
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL V+E ++ E+F+++G++ ++ KD
Sbjct: 327 WADPQEE----PDEQTMSKVKVLYVRNLTQDVTEEKLKEQFEQYGKVER----VKKIKD- 377
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 378 ---YAFIHFED 385
>gi|367000057|ref|XP_003684764.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
gi|357523061|emb|CCE62330.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
Length = 697
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
++ +E SV++RN+P +E +AE F KFG++ VI + AFV F+D
Sbjct: 299 QNRQEDYSVFIRNVPYDATEESLAEHFTKFGDVKYALPVIDRNTGLAKGTAFVAFKD--- 355
Query: 222 VRNAVEVCI 230
+ A E CI
Sbjct: 356 -QKAYEYCI 363
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+K ++V L V+ ++AE F KFG ++ +V+ + +AFV F+D ++V
Sbjct: 102 VKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDT----DSV 157
Query: 227 EVCIL 231
+ IL
Sbjct: 158 DKVIL 162
>gi|340056333|emb|CCC50664.1| poly(A)-binding protein [Trypanosoma vivax Y486]
Length = 548
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++YV+N +V+ + E F++FGE S V++ V C+ FV F++ A++
Sbjct: 289 NLYVKNFDDTVTSERLKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQ 347
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 148 EKSWADTGE----EISAVEDE--EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
EK D E +++A + E E ++VRNLP + +E E+AE F++FG+L++ +++
Sbjct: 308 EKEETDAAEPESKDVNAADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKLTAVHILV 367
Query: 202 --RSRKDVGICY-AFVEFEDMTGVRNAVEVCIL 231
+++ G+ Y FV ED AV+ I
Sbjct: 368 DRSTKRSKGLAYVTFVIPEDGVKAMEAVDGSIF 400
>gi|405957004|gb|EKC23243.1| Heterogeneous nuclear ribonucleoprotein A/B [Crassostrea gigas]
Length = 475
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
EE IK ++V + PS++E+EI E F+ FGE+ + K+ + FVEF++ V+
Sbjct: 139 EEVIKKIFVGKVDPSLTEAEIKEYFETFGEVKKIDLPYDKTKEQRRAFCFVEFKEEDAVK 198
Query: 224 NAVEVCI 230
+ +
Sbjct: 199 KITDQAV 205
>gi|403222576|dbj|BAM40708.1| uncharacterized protein TOT_020001105 [Theileria orientalis strain
Shintoku]
Length = 764
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 158 ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVGICYAFVEF 216
+++ ED E+ +++VRNL +E+E++E F KFGE+ S +V+ +K G AFV F
Sbjct: 442 MASKEDLED--TIFVRNLDYGCTEAELSEYFSKFGEVESSKIVLNEDKKSKGT--AFVRF 497
Query: 217 EDMTGVRNAVE 227
+ V+ +E
Sbjct: 498 KRKEDVKKILE 508
>gi|348535792|ref|XP_003455382.1| PREDICTED: msx2-interacting protein [Oreochromis niloticus]
Length = 3487
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S V+ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|254566579|ref|XP_002490400.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex
[Komagataella pastoris GS115]
gi|238030196|emb|CAY68119.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex
[Komagataella pastoris GS115]
gi|328350795|emb|CCA37195.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 340
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEF 216
++YV+NLPPS ++ + + F +FG++ S V+ + +D G C Y FV F
Sbjct: 201 NLYVKNLPPSTTDERLKQIFSQFGKIKSFKVI--THEDTGACKGYGFVCF 248
>gi|157108555|ref|XP_001650282.1| hypothetical protein AaeL_AAEL000695 [Aedes aegypti]
gi|108884042|gb|EAT48267.1| AAEL000695-PA [Aedes aegypti]
Length = 368
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP +++++A F FG + S V I + ++ C+ FV F+++ + A++
Sbjct: 284 NLFIYHLPQEFTDTDLASTFLPFGNVVSAKVFIDKQTNLSKCFGFVSFDNVASAQAAIQA 343
>gi|313227985|emb|CBY23134.1| unnamed protein product [Oikopleura dioica]
Length = 549
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 155 GEEISAVEDEEEI-KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--- 210
GE ED + + V+V LPP + E EI F+K+G L VV K+
Sbjct: 247 GEGSQNGEDTDRYSRKVFVGGLPPDIDEDEIQASFRKYGPL----VVDWPHKNESRSYFP 302
Query: 211 ---YAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V V+VC+
Sbjct: 303 PKGYAFLLFQDEVSVHGLVQVCV 325
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVK-VMRDNSGRSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|347965861|ref|XP_003435825.1| AGAP001419-PC [Anopheles gambiae str. PEST]
gi|333470322|gb|EGK97589.1| AGAP001419-PC [Anopheles gambiae str. PEST]
Length = 532
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL SE ++ E F++FG + ++ KD
Sbjct: 328 WADPQEE----PDEQTMSKVKVLYVRNLTQDTSEEKLKESFEQFGRVER----VKKIKD- 378
Query: 208 GICYAFVEFED 218
YAFV FED
Sbjct: 379 ---YAFVHFED 386
>gi|71407577|ref|XP_806247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869937|gb|EAN84396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS-VYVRNL 175
P+VS + P+ V QQ A D G S + ++EI+S ++V L
Sbjct: 185 PAVSSTLEPLVACGGVSPQQPQQPFDVPIAGITPEGDAGNSQSRRDPQDEIRSNLFVSGL 244
Query: 176 PPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDMTGVRNAVE 227
SV+++E+ + F +GE+ S V+ I + K GI AFV+F+++ A E
Sbjct: 245 HASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGI--AFVKFKEVANAEKAAE 296
>gi|238006198|gb|ACR34134.1| unknown [Zea mays]
gi|413924828|gb|AFW64760.1| hypothetical protein ZEAMMB73_682858 [Zea mays]
Length = 499
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWAD + S ++KS+YV+NLP +V++ ++ + F+ GE++ V+ ++
Sbjct: 257 SWADH-KNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKV-VIPPAKSGHEN 314
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F++ + V A++
Sbjct: 315 RYGFVHFKERSMVMKALK 332
>gi|357614246|gb|EHJ68984.1| hypothetical protein KGM_20249 [Danaus plexippus]
Length = 260
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL ++E + EEF+++G + ++ KD
Sbjct: 66 WADPQEE----PDEQTMSKVKVLYVRNLTQEITEEALKEEFERYGNVER----VKKIKD- 116
Query: 208 GICYAFVEFED 218
YAFV FED
Sbjct: 117 ---YAFVHFED 124
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 37/59 (62%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++++ +LP +++++ + F+ FG + S V I + ++ C+ FV ++++ +NA++
Sbjct: 299 NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 357
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 129 WNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEF 188
+N P P+T+Q + +WA G + E +++V +L P V++ +++ F
Sbjct: 121 YNGAPMPSTEQ------TFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTF 174
Query: 189 KK-FGELSSEGVVIRSRKDVGICYAFVEFED 218
K +G + VV+ Y FV F D
Sbjct: 175 KNVYGSVKGAKVVLDRTTGRSKGYGFVRFAD 205
>gi|320586970|gb|EFW99633.1| nucleic acid-binding protein [Grosmannia clavigera kw1407]
Length = 314
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICY 211
A+T E SA++ E +Y+RN+ SE + E F+ +G + S+ V+ R + + +
Sbjct: 103 AETAEAPSALDQGETAYGIYIRNVVFDASEQHLKEAFEHYGPV-SKAVIARDARGLSRGF 161
Query: 212 AFVEFEDMTGVRNAV-EVCILMWH 234
AFV F + A+ E WH
Sbjct: 162 AFVWFNTAEAMAKALKEADGSFWH 185
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 155 GEEISAVEDEE--EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
G +S+V E E ++++ N+P + E+A F+ FG + S V + V C+
Sbjct: 334 GIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFG 393
Query: 213 FVEFEDMTGVRNAVEV 228
FV ++ +NA+++
Sbjct: 394 FVSYDSQAAAQNAIDM 409
>gi|326677921|ref|XP_002666113.2| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like, partial [Danio rerio]
Length = 590
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 465 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 524
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 525 VQALIDACI 533
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ +LP ++S++ F FG + S V I + ++ C+ FV +++ +NA+
Sbjct: 439 NLFIYHLPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAI 496
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ ++ F K+G ++S VV+R + C+ FV F+ A
Sbjct: 216 KFTNVYVKNLSETTTDDDLKNIFGKYGSITS-AVVMRDASGMSKCFGFVNFQSSDSAAAA 274
Query: 226 VE 227
VE
Sbjct: 275 VE 276
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 129 WNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEF 188
+N P P+T+Q + +WA G + E +++V +L P V++ +++ F
Sbjct: 121 YNGAPMPSTEQ------TFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTF 174
Query: 189 KK-FGELSSEGVVIRSRKDVGICYAFVEFED 218
K +G + VV+ Y FV F D
Sbjct: 175 KNVYGSVKGAKVVLDRTTGRSKGYGFVRFAD 205
>gi|449500421|ref|XP_004174936.1| PREDICTED: probable RNA-binding protein 46 [Taeniopygia guttata]
Length = 757
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD E+I E + +K +YVRNL S +E +I EF KF GVV R +K
Sbjct: 220 WADP-EKIVDEETMQRVKVLYVRNLMISTTEDKIKAEFNKF----KPGVVERVKKLRD-- 272
Query: 211 YAFVEF 216
YAFV F
Sbjct: 273 YAFVHF 278
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V+VR L ++E+++ E ++FG +S ++ + R+ A VEFEDM G NAV
Sbjct: 43 VHVRGLIDGITEADLVEALQEFGTISYVVLMPKKRQ------ALVEFEDMNGASNAV 93
>gi|388505416|gb|AFK40774.1| unknown [Lotus japonicus]
Length = 181
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE ++ +EF+ +G L S V +R+ G YAF+EF+D +A+
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWV---ARRPPG--YAFLEFDDKRDALDAI 55
Query: 227 EV 228
Sbjct: 56 HA 57
>gi|224065811|ref|XP_002190221.1| PREDICTED: putative RNA-binding protein 15B [Taeniopygia guttata]
Length = 652
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL +VSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 93 EDLMPEDDQRATRNLFIGNLDHNVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 151
Query: 216 FEDM 219
F+++
Sbjct: 152 FQNL 155
>gi|334328479|ref|XP_001366092.2| PREDICTED: msx2-interacting protein isoform 1 [Monodelphis
domestica]
Length = 3559
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|125533975|gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group]
Length = 468
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQE------TVSSYAYEKSWADTGEEISAVEDEEEIKSV 170
PS ++ V +NH +Q+ V SWA+ + ++K++
Sbjct: 226 PSRNRGFLFVEYYNHACADYARQKLSAPNFKVDGSQLTVSWAEPKGSSDSSSAAAQVKTI 285
Query: 171 YVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAVE 227
YV+NLP + S+ +I E F+K GE++ VV+ KD + FV F + + AV+
Sbjct: 286 YVKNLPENASKEKIKEIFEKHGEVTK--VVLPPAKDGHKRDFGFVHFAERSSALKAVK 341
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 175 LPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
LP ++ESE+ F KFGE+ ++ R + CY FV++
Sbjct: 48 LPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDY 89
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++++ +LP + +S++A F +FG++ S V + ++ C+ FV FE + A
Sbjct: 359 EGGNLFIYHLPNDIKDSDLANMFSQFGKVISAKVFLDKHTNLSKCFGFVSFETSQAGQAA 418
Query: 226 VEV 228
++
Sbjct: 419 IQA 421
>gi|449486615|ref|XP_002189293.2| PREDICTED: msx2-interacting protein [Taeniopygia guttata]
Length = 3566
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ ++VYV+NL S ++ + + F +FG ++S VV+R C+ F+ FE A
Sbjct: 37 KFQNVYVKNLSESTTDDGLKKVFGEFGNITS-AVVMRDADGKSKCFGFINFETAEDAAKA 95
Query: 226 VE 227
VE
Sbjct: 96 VE 97
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
+ + ++YV+NL S SE ++ + F ++G ++S VV+R C+ FV FE+
Sbjct: 215 KTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSV-VVMRDADGKSKCFGFVNFENPEDAA 273
Query: 224 NAVEVC 229
AV+
Sbjct: 274 KAVDAL 279
>gi|402585979|gb|EJW79918.1| hypothetical protein WUBG_09173 [Wuchereria bancrofti]
Length = 555
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V N+P + ESEI F+K+G++ E V I++ + YAFV F+ +
Sbjct: 193 DDSDATRTLFVGNMPADIRESEIRRVFEKYGKV--EDVDIKTPPETNAAYAFVLFQTLEQ 250
Query: 222 VRNA 225
NA
Sbjct: 251 SMNA 254
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI----CYAFVEFEDMTGVRN 224
S+YV ++P S +ES++ + F K G++ + VI RK++ I CYA+V F D V
Sbjct: 20 SIYVGDIPTSTTESDLFQIFSKVGQIYT---VIIPRKELSIVKDKCYAYVTFFDEASVPT 76
Query: 225 AVE 227
A+E
Sbjct: 77 AIE 79
>gi|401422974|ref|XP_003875974.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492214|emb|CBZ27488.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 696
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDM 219
D E +++V LP SV + E+ E F+K GE+ S V+ I + + GI AFV+F+++
Sbjct: 227 NDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGI--AFVKFKNV 284
Query: 220 TGVRNAVEV 228
NAV+
Sbjct: 285 ENAENAVDA 293
>gi|170588995|ref|XP_001899259.1| Conserved hypothetical protein [Brugia malayi]
gi|158593472|gb|EDP32067.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 555
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V N+P + ESEI F+K+G++ E V I++ + YAFV F+ +
Sbjct: 193 DDSDATRTLFVGNMPADIRESEIRRVFEKYGKV--EDVDIKTPPETNAAYAFVLFQTLEQ 250
Query: 222 VRNA 225
NA
Sbjct: 251 SMNA 254
>gi|426327960|ref|XP_004024776.1| PREDICTED: msx2-interacting protein [Gorilla gorilla gorilla]
Length = 3662
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|19111982|ref|NP_595190.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74676185|sp|O94359.2|YHOC_SCHPO RecName: Full=Uncharacterized RNA-binding protein C428.12c
gi|6942016|emb|CAA22287.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 116
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
E +V+V NL PSV+ES + F FGE+ S + R K V YAFVEF++ +
Sbjct: 2 ERRKATVHVGNLAPSVTESLLYNAFIPFGEIISVALH-RKEKAVDRSYAFVEFDEPEDAK 60
Query: 224 NAVE 227
A+E
Sbjct: 61 EAME 64
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
E ++VRNLP + +E E+AE F KFGELS +V+ AFV
Sbjct: 328 ETGRLFVRNLPYTATEEELAELFGKFGELSEVHLVLDKTTKRSKAMAFV 376
>gi|37999864|sp|Q62504.2|MINT_MOUSE RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
Length = 3644
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|395821181|ref|XP_003783926.1| PREDICTED: msx2-interacting protein [Otolemur garnettii]
Length = 3674
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|255081632|ref|XP_002508038.1| predicted protein [Micromonas sp. RCC299]
gi|226523314|gb|ACO69296.1| predicted protein [Micromonas sp. RCC299]
Length = 517
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD-------VGIC---YAFVEF 216
+ +V+VRN+P S E+ I F K G +++ V IR+ K G YAFV+F
Sbjct: 349 VTAVFVRNIPQSADEASIEAAFAKIGPIAT--VTIRTAKRQPDANDATGGAPGRYAFVQF 406
Query: 217 EDMTGVRNAVEVCILM 232
E + A+E + M
Sbjct: 407 EKAESAQAAIEATVEM 422
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ + +++R+ G +AFVEF+D +AV+
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITF--IDLKNRR--GPPFAFVEFDDPRDAEDAVQA 64
>gi|359319100|ref|XP_003638995.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein [Canis
lupus familiaris]
Length = 3612
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|296206804|ref|XP_002750362.1| PREDICTED: msx2-interacting protein [Callithrix jacchus]
Length = 3675
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|269868283|gb|ACZ52446.1| Bruno-3 transcript variant 17 [Drosophila virilis]
Length = 334
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP ++E+ + F FG + S V I + C+ FV F++ TG + A++
Sbjct: 261 NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPTGAQAAIQA 320
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ ++ F K+G ++S VV+R + C+ FV F+ A
Sbjct: 650 KFTNVYVKNLSETTTDDDLKNIFGKYGSITS-AVVMRDASGMSKCFGFVNFQSSDSAAAA 708
Query: 226 VE 227
VE
Sbjct: 709 VE 710
>gi|297666332|ref|XP_002811483.1| PREDICTED: msx2-interacting protein [Pongo abelii]
Length = 3662
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|297484241|ref|XP_002694185.1| PREDICTED: msx2-interacting protein [Bos taurus]
gi|296479096|tpg|DAA21211.1| TPA: spen homolog, transcriptional regulator [Bos taurus]
Length = 3652
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 165 EEIKS----VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFED 218
EE+K+ VYV+N+ P V++ E E F KFG+++S + SR D G + FV + D
Sbjct: 224 EEMKANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATI---SRDDSGKSRGFGFVNYVD 280
Query: 219 MTGVRNAVE 227
+ AV+
Sbjct: 281 HENAQTAVD 289
>gi|120587001|ref|NP_062737.2| msx2-interacting protein [Mus musculus]
Length = 3643
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|119908535|ref|XP_591419.3| PREDICTED: msx2-interacting protein [Bos taurus]
Length = 3652
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|380810782|gb|AFE77266.1| msx2-interacting protein [Macaca mulatta]
gi|383416741|gb|AFH31584.1| msx2-interacting protein [Macaca mulatta]
Length = 3672
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|194769920|ref|XP_001967049.1| GF21843 [Drosophila ananassae]
gi|190622844|gb|EDV38368.1| GF21843 [Drosophila ananassae]
Length = 90
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
+ + ++V NLP +V E+ FK+FG + S V+ R Y FV F +T +
Sbjct: 12 KSVHRIFVGNLPWTVGHQELRGYFKEFGRVISANVIFDKRTGCSKGYGFVSFNSLTAL 69
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEF+D +AV
Sbjct: 22 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRR--GPPFAFVEFDDPRDAEDAVHA 76
>gi|320168946|gb|EFW45845.1| hypothetical protein CAOG_03829 [Capsaspora owczarzaki ATCC 30864]
Length = 617
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
KSV+V NLP + E + E F K G++++ +V + +VG + FV F+D + AV
Sbjct: 424 KSVFVGNLPMNAEEEALWEAFGKCGDIATVRLVRDAETNVGKGFGFVSFKDAASIDLAVR 483
Query: 228 V 228
+
Sbjct: 484 L 484
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 155 GEEISAVEDEE--EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
G +S+V E E ++++ N+P + E+A F+ FG + S V + V C+
Sbjct: 334 GIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFG 393
Query: 213 FVEFEDMTGVRNAVEV 228
FV ++ +NA+++
Sbjct: 394 FVSYDSQAAAQNAIDM 409
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 163 DEEEIK--SVYVRNLPPSVSESEIAEEFKKFGELSSEGV-VIRSRKDVGICYAFVEFEDM 219
D+ ++K +VYV+N+ P +SE+E E FKKFG ++S + V + K G + FV +E+
Sbjct: 240 DDMKLKFTNVYVKNIDPEISEAEFEELFKKFGNVTSLSLSVDENGKSRG--FGFVNYENH 297
Query: 220 TGVRNAVE 227
AVE
Sbjct: 298 EDAARAVE 305
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 100 SILRVAKGQSTPSVTPQPSVSKNI---SPVSDWNHVPQPTTQQETVSSYAYEKSWADTGE 156
S+L + ST + + +KNI S ++ + + PT + + + A++G
Sbjct: 2 SLLAIESVSSTAPINISETSNKNILSKSKLARSDDIASPTEAAGSADDPSRLSAGANSGV 61
Query: 157 EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
+S ++ S+YV L PSV+E+ + E F G ++S V + + YA+V F
Sbjct: 62 PVS--QNNSNSASLYVGELDPSVTEAMLFELFNNIGAVASIRVCRDAVTRRSLGYAYVNF 119
Query: 217 ED------MTGVRNAVEV---------CILMW 233
+ +TG R E+ C +MW
Sbjct: 120 HNSSDVNLLTGERALDELNYTLIKGKPCRIMW 151
>gi|149641714|ref|XP_001505968.1| PREDICTED: speckle targeted PIP5K1A-regulated poly(A) polymerase
[Ornithorhynchus anatinus]
Length = 648
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
+E+ A + ++SVYV P S++++ F+ FG +S G+V+ KD G+ +A VE
Sbjct: 44 QELRATRQSQGMRSVYVSGFPRGTDPSQLSQYFQTFGPVS--GIVM--DKDKGV-FAIVE 98
Query: 216 FEDMTGVRNAV 226
D+ G R AV
Sbjct: 99 LGDV-GTREAV 108
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D+ +VYV+NL + +E ++ + F ++G ++S VV+R C+ FV FE+
Sbjct: 203 DKATFNNVYVKNLSETTTEEDLKKIFGEYGTITS-AVVMRDGNGKSRCFGFVNFENPDDA 261
Query: 223 RNAVEVC 229
+VE
Sbjct: 262 AQSVEAL 268
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ ++ F K+G ++S VV+R + C+ FV F+ A
Sbjct: 190 KFTNVYVKNLSETTTDDDLKNIFGKYGSITS-AVVMRDASGMSKCFGFVNFQSSDSAAAA 248
Query: 226 VE 227
VE
Sbjct: 249 VE 250
>gi|348516739|ref|XP_003445895.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like [Oreochromis niloticus]
Length = 721
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 460 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 519
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 520 VQALIDACI 528
>gi|291222526|ref|XP_002731265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Saccoglossus kowalevskii]
Length = 648
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DEE ++K +YVRNL P E ++ E F+ FG + ++ KD
Sbjct: 335 WADPQEE----PDEETMAKVKVLYVRNLTPDAEEEKLKEAFQAFGTVER----VKKLKD- 385
Query: 208 GICYAFVEFEDMTGVRNAVE 227
Y FV FE+ A+E
Sbjct: 386 ---YCFVHFEERDAAVKAME 402
>gi|119572141|gb|EAW51756.1| spen homolog, transcriptional regulator (Drosophila) [Homo sapiens]
Length = 3664
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + VYV NLP V + E+ + F K+G + + I+S + G +AFVEFED +A
Sbjct: 8 EDQKVYVGNLPGDVRDKEVEDIFHKYGRIKY--IDIKSGR--GPAFAFVEFEDHRDAEDA 63
Query: 226 V 226
V
Sbjct: 64 V 64
>gi|14790190|ref|NP_055816.2| msx2-interacting protein [Homo sapiens]
gi|41688816|sp|Q96T58.1|MINT_HUMAN RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
gi|14029609|gb|AAK52750.1|AF356524_1 nuclear receptor transcription cofactor [Homo sapiens]
Length = 3664
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVK-VMRDSSGRSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|359476412|ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Vitis vinifera]
gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++F+D ++A+
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWV---ARRPPG--YAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
E I +YV NLP V+ ++ EF+K+G + V +K V G +AF+EFED
Sbjct: 4 RESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|407339771|ref|NP_001258424.1| uncharacterized protein LOC690911 [Rattus norvegicus]
Length = 3611
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|328867594|gb|EGG15976.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 372
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
E++E+ K ++V NLP ES + + F KFG +++ + R +AF+EFE+
Sbjct: 252 EEKEKSKCLFVGNLPYHYQESHLRDLFIKFGTIATLNIGFDKRTGHNRGFAFIEFEN 308
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VYV NLPP + +I + F KFG+++ V +++R+ G + FVEFED +AV
Sbjct: 9 VYVGNLPPDIRARDIEDLFYKFGKIAF--VDLKTRR--GPPFCFVEFEDPRDASDAVH 62
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+++ +LP ++S++ F FG + S V I + ++ C+ FV +++ +NA+
Sbjct: 495 LFIYHLPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAI 551
>gi|74215844|dbj|BAE23446.1| unnamed protein product [Mus musculus]
Length = 631
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 146 AYEKSWADTGEEISAVEDE-----EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV 200
AYE A GE +AV E + ++V NLP +V E +I E FK++G + S ++
Sbjct: 61 AYE---AGEGEPATAVAGTPPSMVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKIL 117
Query: 201 IRSRKDVGICYAFVEFEDMTGVRNA 225
+ + G+ AFV+F D+ + A
Sbjct: 118 PKRGSEGGVA-AFVDFVDIKSAQKA 141
>gi|344265136|ref|XP_003404642.1| PREDICTED: LOW QUALITY PROTEIN: peroxisome proliferator-activated
receptor gamma coactivator 1-beta-like [Loxodonta
africana]
Length = 1016
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
E + VYVRNLP +S E+ F+ FGE+ V++RS++ G Y F+ +
Sbjct: 893 EGRVVYVRNLPSDMSSRELKRRFEVFGEIVECQVLMRSKR--GEKYGFITY 941
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 155 GEEISAVEDEEEI-------KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
G IS E E+E+ +VYV+N ++E + E F+K+G ++S V+++ K
Sbjct: 172 GRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMKDGKSR 231
Query: 208 GICYAFVEFEDMTGVRNAVE 227
G + FV FE+ AV+
Sbjct: 232 G--FGFVAFENPDAAERAVQ 249
>gi|209875813|ref|XP_002139349.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554955|gb|EEA05000.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 408
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEF-KKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
+D EE K++++RN+P SES++ + F ++FG++ +V+ + AFV+F D+
Sbjct: 19 DDVEEGKTIFLRNIPFGTSESDLKQFFEERFGKVIYARIVLSRSTHLPKGVAFVKFRDLE 78
Query: 221 GVRNAVE 227
V++ ++
Sbjct: 79 AVKHVLD 85
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+V+V+ +P SVSE E+AE F G + + + R YAFV FE V+NA+ +
Sbjct: 196 TVFVKEIPASVSERELAETFAACGRI-VDCRMCRDANSNKFSYAFVAFETADEVQNALSL 254
Query: 229 CILMWH 234
+ H
Sbjct: 255 DKMSLH 260
>gi|270001371|gb|EEZ97818.1| hypothetical protein TcasGA2_TC000185 [Tribolium castaneum]
Length = 638
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ ++K +YVRNL +SE ++ E F+ +G++ ++ KD
Sbjct: 337 WADPQEE----PDEQTMSKVKVLYVRNLTQEISEEKLKEAFEAYGKVER----VKKIKD- 387
Query: 208 GICYAFVEFEDMTGVRNAVE 227
YAF+ FED A+E
Sbjct: 388 ---YAFIHFEDRENAVKAME 404
>gi|226532353|ref|NP_001140388.1| uncharacterized protein LOC100272442 [Zea mays]
gi|194699276|gb|ACF83722.1| unknown [Zea mays]
gi|413937728|gb|AFW72279.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286699|gb|AGC79941.1| arginine/serine-rich splicing factor RSZ28IV [Zea mays]
Length = 141
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRS---VWVARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|328721758|ref|XP_001949824.2| PREDICTED: probable RNA-binding protein orb2-like isoform 3
[Acyrthosiphon pisum]
Length = 380
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG+L + K YAF+ F+D + V+
Sbjct: 123 RKVFVGGLPPDIDEDEITASFRRFGQLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQL 182
Query: 226 VEVCI 230
++ CI
Sbjct: 183 IDACI 187
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+E +++YV NL PSVSE IA F + G ++ V+ D YAFVEF D
Sbjct: 39 DEPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGAND---PYAFVEFSDHGQASQ 95
Query: 225 AVEV 228
A++
Sbjct: 96 ALQT 99
>gi|402853087|ref|XP_003891234.1| PREDICTED: msx2-interacting protein [Papio anubis]
Length = 3498
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WA G++ ED V+V +L P V++ +A+ F FG LS V+
Sbjct: 61 NWAYQGQQNK--EDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 118
Query: 210 CYAFVEFEDMTGVRNAVEVCILMW 233
Y F+ F D T A+ W
Sbjct: 119 GYGFLAFRDKTDAEQAIATMNGEW 142
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 140 ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
ET E+S D EI +DEE+ +++YVRNL P +E ++ + F FG +
Sbjct: 198 ETKQRAQEERSKRDA--EIQRRQDEEDARTIYVRNLNPKTTEQQLRDHFSVFGAI 250
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ +V+V+NL + +E ++ E F KFG ++S VV+R C+ FV FE
Sbjct: 211 KFNNVFVKNLSETTTEDDLREIFGKFGTITSV-VVMREGDGRSKCFGFVNFE 261
>gi|195635411|gb|ACG37174.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413922982|gb|AFW62914.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 277
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ V+V NL P V+ EI +EF+ FG L S V RK G +AF++F+D ++A+
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWVA---RKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|170042808|ref|XP_001849104.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167866261|gb|EDS29644.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 92
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+A ++ +++ NLP +VS E+ F KFG + S V+ + Y F+ F
Sbjct: 6 AATAFARGVQKLFIGNLPWTVSTKELQGYFSKFGHVQSSNVIYDKTTGLSRGYGFIVFST 65
Query: 219 MTGVRNAVE 227
G NA
Sbjct: 66 RDGYANATN 74
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+ +V+V+NL S +E + E F ++G ++S VV+R C+ FV FED
Sbjct: 45 KFNNVFVKNLSESTTEDNLLEIFGEYGNITS-AVVMREGDGKSKCFGFVNFED 96
>gi|326678940|ref|XP_002666445.2| PREDICTED: cytoplasmic polyadenylation element-binding protein 2
[Danio rerio]
Length = 728
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 154 TGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICY 211
GE I E + V+V LPP + E EI F++FG L + K Y
Sbjct: 462 NGERI-----ERFSRKVFVGGLPPDIDEDEITSSFRRFGHLVVDWPHKAESKSYFPPKGY 516
Query: 212 AFVEFEDMTGVRNAVEVCI 230
AF+ F++ T V+ +E C+
Sbjct: 517 AFLLFQEETSVQALIEACL 535
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ +LP +++++A F FG + S V I + ++ C+ FV F++ T + A+
Sbjct: 410 NLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAI 467
>gi|226497532|ref|NP_001141411.1| uncharacterized protein LOC100273521 [Zea mays]
gi|194704502|gb|ACF86335.1| unknown [Zea mays]
Length = 222
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ V+V NL P V+ EI +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWV---ARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|15228016|ref|NP_181204.1| poly(A) binding protein 7 [Arabidopsis thaliana]
gi|12229883|sp|Q9ZQA8.1|PABPX_ARATH RecName: Full=Probable polyadenylate-binding protein At2g36660;
Short=PABP; Short=Poly(A)-binding protein At2g36660
gi|4415911|gb|AAD20142.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330254185|gb|AEC09279.1| poly(A) binding protein 7 [Arabidopsis thaliana]
Length = 609
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFED 218
V+ EE+ ++Y++NL VSE + E+F +FG++ S + ++ + +C YAFV F++
Sbjct: 194 VKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAI---AKDENRLCRGYAFVNFDN 250
Query: 219 MTGVRNAVEV 228
R A E
Sbjct: 251 PEDARRAAET 260
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV-VIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +V+V+NLP SV+ + + + FKKFG + S V + K G Y FV+FE A
Sbjct: 111 VGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRG--YGFVQFEQEDAAHAA 168
Query: 226 VEV 228
++
Sbjct: 169 IQT 171
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 158 ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ A E ++ +V+ +N+ +S+ +I +EF+ FGE+ S+ V++S G Y FV ++
Sbjct: 201 LEAEETQKNFTNVFFKNVAADISDEDIMKEFENFGEIESK--VLKSHDQFG-RYGFVAYK 257
Query: 218 DMTGVRNAV 226
D + AV
Sbjct: 258 DTADAQKAV 266
>gi|367012397|ref|XP_003680699.1| hypothetical protein TDEL_0C05990 [Torulaspora delbrueckii]
gi|359748358|emb|CCE91488.1| hypothetical protein TDEL_0C05990 [Torulaspora delbrueckii]
Length = 337
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +++ L PS +IA F +FGE+ S +V +CY F+EF D +A
Sbjct: 252 RVLFICRLNPSTKAKDIATIFHRFGEVHSVEIVRDKESGRSLCYGFIEFNDRKACESA 309
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEF+D +AV
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRR--GPPFAFVEFDDPRDAEDAVHA 65
>gi|393910934|gb|EFO26130.2| hypothetical protein LOAG_02347 [Loa loa]
Length = 555
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V N+P + ESEI F+K+G++ E V I++ + YAFV F+ +
Sbjct: 193 DDSDATRTLFVGNMPADIRESEIRRVFEKYGKV--EDVDIKTPPETNAAYAFVLFQTLEQ 250
Query: 222 VRNA 225
NA
Sbjct: 251 SMNA 254
>gi|47206459|emb|CAF93650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 602
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI-RSRKDVGICYAFV 214
E++ +D+ ++++ NL +V+E+E+ F K+G + E VVI R + G YAFV
Sbjct: 176 EDLKPEDDQRATSNLFIGNLDGNVTEAELRRGFDKYGII--EDVVIKRPARGQGGAYAFV 233
Query: 215 EFEDM 219
+F+++
Sbjct: 234 KFQNL 238
>gi|303272661|ref|XP_003055692.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463666|gb|EEH60944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 438
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
SV+VR+LP S+ + E +KFG++ S VV+ AFV+F D A+E
Sbjct: 170 SVFVRDLPTDASKQSLFERMQKFGKVRSCRVVLDKTTGRSKGTAFVDFVDAASASRAIEA 229
Query: 229 C 229
Sbjct: 230 A 230
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+E +++YV NL P+VSE +A F + G ++ V+ D YAFVEF D
Sbjct: 39 DEPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGAND---PYAFVEFSDHAQASQ 95
Query: 225 AVEVC 229
A++
Sbjct: 96 ALQTM 100
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
AVE EE ++ RNL S++ESE+ E F FGEL + + S+ +A+V+F
Sbjct: 320 AVEKIEETGRLFARNLSYSITESELEELFSPFGELEEVHLPMDSKSHTPKGFAYVQF 376
>gi|328721760|ref|XP_003247398.1| PREDICTED: probable RNA-binding protein orb2-like isoform 2
[Acyrthosiphon pisum]
Length = 347
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG+L + K YAF+ F+D + V+
Sbjct: 90 RKVFVGGLPPDIDEDEITASFRRFGQLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQL 149
Query: 226 VEVCI 230
++ CI
Sbjct: 150 IDACI 154
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGV 222
E I +YV NLP V+ ++ EF+K+G + V +K V G +AF+EFED
Sbjct: 4 RESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDV----KKTVSGAAFAFIEFEDARDA 59
Query: 223 RNAVE 227
+A++
Sbjct: 60 ADAIK 64
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ + +++R+ G +AFVEF+D +AV
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITF--IDLKNRR--GPPFAFVEFDDPRDAEDAVHA 64
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEF+D +AV
Sbjct: 12 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRR--GPPFAFVEFDDPRDAEDAVHA 66
>gi|312069978|ref|XP_003137933.1| hypothetical protein LOAG_02347 [Loa loa]
Length = 545
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V N+P + ESEI F+K+G++ E V I++ + YAFV F+ +
Sbjct: 193 DDSDATRTLFVGNMPADIRESEIRRVFEKYGKV--EDVDIKTPPETNAAYAFVLFQTLEQ 250
Query: 222 VRNA 225
NA
Sbjct: 251 SMNA 254
>gi|6642640|gb|AAF20221.1|AC012395_8 putative RNA-binding protein [Arabidopsis thaliana]
Length = 946
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 145 YAYEK-----SWADTG----EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELS 195
YAY K + ADTG ++ A+ ++ I+ V++LPP+ + + + FK+FG +
Sbjct: 513 YAYNKNIKADAGADTGNGNSQDSQAITEDAHIR---VKDLPPNATVALVESVFKQFGPIK 569
Query: 196 SEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCIL 231
+ + + + YAFVEFE+ + A++ L
Sbjct: 570 KGRIRVINPANSNYWYAFVEFEEADAAKRAIQASPL 605
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 21/138 (15%)
Query: 90 VGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEK 149
VG P + R + TP+ T P +S I P S + H PQ +
Sbjct: 320 VGSPMPQLGGT--RSSTNLGTPTSTMPPGLSSTIVPNSGYMHSPQ-----------FHRV 366
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
++ ++ + ++YV NLP SE E+ F K + + + R++++ +
Sbjct: 367 NY----PPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTK--QRGYKRLCFRNKQNGPM 420
Query: 210 CYAFVEFEDMTGVRNAVE 227
C FVEFED++ A+
Sbjct: 421 C--FVEFEDISFATKALH 436
>gi|119471797|ref|XP_001258224.1| RNA binding protein MSSP-2, putative [Neosartorya fischeri NRRL
181]
gi|119406376|gb|EAW16327.1| RNA binding protein MSSP-2, putative [Neosartorya fischeri NRRL
181]
Length = 616
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 115 PQPSVSKNIS---PVSDWNHVPQPT--------------------TQQETVSSYAYEKSW 151
P P+VS S P+ ++N PQP TQQE A W
Sbjct: 202 PGPAVSTMDSSSIPLLNYNGPPQPCLPYQVMKTPNGYMLQDLESITQQEPPIPRAVPAMW 261
Query: 152 ADTGEEISA--VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+ E A +E+ E I +VY+R P ++ + +FG++ ++ D G+
Sbjct: 262 TNPSEVTLAKCLENREGITNVYIRGFLPQTTDEMLHSYAARFGKIDRCKAIV--DLDTGL 319
Query: 210 C--YAFVEFEDMTGVRNAVE 227
C + FV+F + N +
Sbjct: 320 CKGFGFVQFYNFESCENCIR 339
>gi|47933430|gb|AAT39343.1| polyadenylate binding protein [Oikopleura dioica]
Length = 610
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++V+NLP S + + F++FGE+ S V+ + C+ F+ F++ AVE+
Sbjct: 183 NLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEI 242
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ + +++R+ G +AFVEF+D +AV
Sbjct: 10 IYVGNLPPDIRSKDIEDLFYKFGKITF--IDLKNRR--GPPFAFVEFDDPRDAEDAVHA 64
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WA G++ ED V+V +L P V++ +A+ F FG LS V+
Sbjct: 91 NWAYQGQQNK--EDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 148
Query: 210 CYAFVEFEDMTGVRNAVEVCILMW 233
Y F+ F D T A+ W
Sbjct: 149 GYGFLAFRDKTDAEQAIATMNGEW 172
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+K++YV NLP S +E E+ E F ++GE+SS ++ + FVE D
Sbjct: 2 VKTLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMSD 53
>gi|384250281|gb|EIE23761.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 374
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVR 223
+++KSVYV NLP S +E+++ E F++FGE+ ++ V+ SR D + FV F + + V
Sbjct: 252 QQVKSVYVGNLPASANEAKLKELFEQFGEV-TKVVIPPSRPDKPNREFGFVHFSERSVVE 310
Query: 224 NAVE 227
V+
Sbjct: 311 KLVQ 314
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WA G++ ED V+V +L P V++ +A+ F FG LS V+
Sbjct: 91 NWAYQGQQNK--EDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 148
Query: 210 CYAFVEFEDMTGVRNAVEVCILMW 233
Y F+ F D T A+ W
Sbjct: 149 GYGFLAFRDKTDAEQAIATMNGEW 172
>gi|242084538|ref|XP_002442694.1| hypothetical protein SORBIDRAFT_08g001290 [Sorghum bicolor]
gi|241943387|gb|EES16532.1| hypothetical protein SORBIDRAFT_08g001290 [Sorghum bicolor]
Length = 491
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 150 SWADT---GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
SWADT GE S ++KS+Y++NLP +V++ ++ F+ GE++ V+ ++
Sbjct: 250 SWADTKNGGESAST----SQVKSLYIKNLPKTVTQEQLKRLFEHLGEVTKV-VIPPAKAG 304
Query: 207 VGICYAFVEFEDMTGVRNAVE 227
Y FV F++ + A++
Sbjct: 305 HENRYGFVHFKERSMAMKALK 325
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|345496166|ref|XP_001603373.2| PREDICTED: probable RNA-binding protein orb2-like [Nasonia
vitripennis]
Length = 398
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--I 209
++TGE S + V+V LPP + E EI F++FG L + K
Sbjct: 133 SETGERFS--------RKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK 184
Query: 210 CYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 185 GYAFLLFQDEASVQQLIDACI 205
>gi|164661185|ref|XP_001731715.1| hypothetical protein MGL_0983 [Malassezia globosa CBS 7966]
gi|159105616|gb|EDP44501.1| hypothetical protein MGL_0983 [Malassezia globosa CBS 7966]
Length = 214
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
K++YV+N PPS+S SE+A EF++ G L + + YAFVE+ D +A
Sbjct: 12 KTLYVKNFPPSMSASELAYEFERIGPLVRCDIPA-PKTPHSKVYAFVEYADPYDAEDA 68
>gi|71414344|ref|XP_809277.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873635|gb|EAN87426.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 117 PSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS-VYVRNL 175
P+VS + P+ V QQ A D G S + ++EI+S ++V L
Sbjct: 185 PAVSSTLEPLVACGGVSPQQPQQPFDVPIAGITPERDAGNSQSRRDPQDEIRSNLFVSGL 244
Query: 176 PPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDMTGVRNAVE 227
SV+++E+ + F +GE+ S V+ I + K GI AFV+F+++ A E
Sbjct: 245 HASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGI--AFVKFKEVANAEKAAE 296
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 94 ERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 153
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 154 PRGFGFITFEDEQSVDQAVNM 174
>gi|297307105|ref|NP_001167465.1| heterogeneous nuclear ribonucleoprotein L [Xenopus laevis]
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xenopus laevis]
Length = 538
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V+VR L V E+++AE ++FG +S V+ + R+ A VEFED+ G NAV
Sbjct: 53 VHVRGLIDGVVETDLAEALQEFGAISYVVVMPKKRQ------ALVEFEDINGACNAV 103
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|410914166|ref|XP_003970559.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 2 [Takifugu rubripes]
Length = 719
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG L + K YAF+ F+D + V+
Sbjct: 462 RKVFVGGLPPDIDEDEITASFRRFGHLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQAL 521
Query: 226 VEVCI 230
++ CI
Sbjct: 522 IDACI 526
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WA + + ED V+V +L P V++ +A+ F FG LS V+
Sbjct: 184 NWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSR 243
Query: 210 CYAFVEFEDMTGVRNAVEVCILMW 233
Y F+ F D T A+ W
Sbjct: 244 GYGFLAFRDKTDAEQAIATMNGEW 267
>gi|410914164|ref|XP_003970558.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 1 [Takifugu rubripes]
Length = 744
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG L + K YAF+ F+D + V+
Sbjct: 487 RKVFVGGLPPDIDEDEITASFRRFGHLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQAL 546
Query: 226 VEVCI 230
++ CI
Sbjct: 547 IDACI 551
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 148 EKSWADTGEEISAVEDEEEI----KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR- 202
EKS A E E ++EI ++YV NL V+E+E+ + F KFG L V+
Sbjct: 5 EKSPASVNEADDNNEADQEISNPGNNLYVANLAHRVTETELNDLFAKFGRLEKCEVITDP 64
Query: 203 -SRKDVGICYAFVEFEDMTGVRNAVE 227
SR+ G +AFV FED+ +AV+
Sbjct: 65 ISRESRG--FAFVTFEDVRDANDAVQ 88
>gi|348518952|ref|XP_003446995.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 1 [Oreochromis niloticus]
Length = 751
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 490 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 549
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 550 VQALIDACI 558
>gi|339898392|ref|XP_003392565.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399546|emb|CBZ08733.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 693
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 159 SAVEDEEEIKS-VYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVE 215
S ++ E++S ++V LP SV + E+ E F+K GE+ S V+ I + + GI AFV+
Sbjct: 220 SGQPNDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGI--AFVK 277
Query: 216 FEDMTGVRNAVEV 228
F+++ NAV+
Sbjct: 278 FKNVEHAENAVDA 290
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRN 224
+K++YV NLP S +E E+ + F ++GE+ S V + S +D G + FVE ED G
Sbjct: 1 MKNIYVGNLPFSSTEDEVRDLFAQYGEVQS--VKLISDRDTGRPRGFGFVEMED-GGADK 57
Query: 225 AVEVC 229
A+E
Sbjct: 58 AIEAL 62
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 103 RVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVE 162
R + TP+ T P +S I P S + H PQ + ++ ++ +
Sbjct: 342 RSSTNLGTPTSTMPPGLSSTIVPNSGYMHSPQ-----------FHRVNY----PPVNPAD 386
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++YV NLP SE E+ F K + + + R++++ +C FVEFED++
Sbjct: 387 QNPPCNTLYVGNLPHDTSEDELKSLFTK--QRGYKRLCFRNKQNGPMC--FVEFEDISFA 442
Query: 223 RNAVE 227
A+
Sbjct: 443 TKALH 447
>gi|78706560|ref|NP_001027083.1| CG33714, isoform B [Drosophila melanogaster]
gi|78706562|ref|NP_001027084.1| CG33714, isoform A [Drosophila melanogaster]
gi|195346144|ref|XP_002039627.1| GM22629 [Drosophila sechellia]
gi|22833182|gb|AAN09672.1| CG33714, isoform B [Drosophila melanogaster]
gi|22833183|gb|AAN09673.1| CG33714, isoform A [Drosophila melanogaster]
gi|194134853|gb|EDW56369.1| GM22629 [Drosophila sechellia]
Length = 90
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
+ + ++V NLP +V E+ F++FG + S V+ R Y FV F +T +
Sbjct: 12 KSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTAL 69
>gi|398016131|ref|XP_003861254.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499479|emb|CBZ34552.1| hypothetical protein, conserved [Leishmania donovani]
Length = 693
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 159 SAVEDEEEIKS-VYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVE 215
S ++ E++S ++V LP SV + E+ E F+K GE+ S V+ I + + GI AFV+
Sbjct: 220 SGQPNDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGI--AFVK 277
Query: 216 FEDMTGVRNAVEV 228
F+++ NAV+
Sbjct: 278 FKNVEHAENAVDA 290
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+VY++++P S +E +I EEF FGE++S V + G +AFV + + R AVE
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPK---GRRFAFVNYAEFEQARAAVE 282
>gi|340055699|emb|CCC50020.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 590
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 109 STPSVTPQPSVSKNISP--VSDWNHVP----QPTTQQETVSSYAYEKSWADTGEEISAVE 162
+T + P P+V + P + HVP + T+ E S +S E+ + E
Sbjct: 200 TTQPLKPAPTVPSVMEPSAAAQLPHVPSGSLEDTSASEATSKVKSSRSQTKPKRELDSQE 259
Query: 163 DEEEIKS-VYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDM 219
++E++S ++V L V++ ++ E F FGE+ S V+ I + K GI AFV+F +
Sbjct: 260 LDDEMRSNLFVSGLHQHVTDKQLHELFAPFGEIQSAKVMLNINTGKSRGI--AFVKFAKV 317
Query: 220 TGVRNAVE 227
A+E
Sbjct: 318 GDAEKAME 325
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + E F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ ++ F +FG +SS VV+R + C+ FV FE+ A
Sbjct: 214 KFNNVYVKNLGDATTDDDLKRVFGEFGPISS-AVVMRDPEGKSKCFGFVNFENADDAALA 272
Query: 226 VE 227
VE
Sbjct: 273 VE 274
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ ++ F +FG +SS VV+R + C+ FV FE+ A
Sbjct: 214 KFNNVYVKNLGDATTDDDLKRVFGEFGPISS-AVVMRDPEGKSKCFGFVNFENADDAALA 272
Query: 226 VE 227
VE
Sbjct: 273 VE 274
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|348518954|ref|XP_003446996.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 2 [Oreochromis niloticus]
Length = 726
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 465 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 524
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 525 VQALIDACI 533
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 113 ERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 172
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 173 PRGFGFITFEDEQSVDQAVNM 193
>gi|124298405|gb|ABN04303.1| cytoplasmatic polyadenylation element binding protein 4 [Danio
rerio]
Length = 703
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 442 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 501
Query: 222 VRNAVEVCI 230
V+ ++ C+
Sbjct: 502 VQALIDACM 510
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+VY++++P S +E +I EEF FGE++S V + G +AFV + + R AVE
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPK---GRRFAFVNYAEFEQARAAVE 282
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+VYV+NL SV+E ++ E F+KFG L+S VV++ + + FV +ED +V
Sbjct: 208 FNNVYVKNLHESVTEEKLREVFEKFGALTSV-VVMKDAEGKSKGFGFVCYEDAEAAGKSV 266
Query: 227 E 227
E
Sbjct: 267 E 267
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ +LP +++++A F FG + S V I + ++ C+ FV F++ T + A+
Sbjct: 385 NLFIYHLPQEFTDTDLASTFLPFGPVISAKVFIDKQTNLSKCFGFVSFDNATSAQQAI 442
>gi|357154289|ref|XP_003576733.1| PREDICTED: flowering time control protein FPA-like [Brachypodium
distachyon]
Length = 875
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
I++++V + PS+S+ E+ EEF+KFG++ EGV SR F + ED A+
Sbjct: 116 IRNLWVGGISPSISKEELEEEFQKFGKI--EGVAF-SRDQTSAYIDFEKLEDAISAHRAL 172
Query: 227 EVCIL 231
+L
Sbjct: 173 NGTVL 177
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+ +++V+NLP S + + F++FGE+ S V+ + C+ F+ F++
Sbjct: 179 KHFTNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEA 238
Query: 225 AVEV 228
AVE+
Sbjct: 239 AVEI 242
>gi|363807806|ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
gi|255640857|gb|ACU20711.1| unknown [Glycine max]
Length = 177
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E ++ +EF+ +G L S V +R+ G YAF+EF+D +A+
Sbjct: 1 MSRVYVGNLHPRVNERDLEDEFRIYGVLMS---VWVARRPPG--YAFIEFDDRRDALDAI 55
Query: 227 EV 228
+
Sbjct: 56 QA 57
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 95 ERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 154
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 155 PRGFGFITFEDEQSVDQAVNM 175
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI--RDIDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|384247652|gb|EIE21138.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 107
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
SA D ++YVRNLP + E + + F+ FG L S +V + + Y FV F
Sbjct: 7 SAKRDCNVHANLYVRNLPKDLDEGTLQQLFQSFGPLESCRLVKEASSGISRGYGFVRFSS 66
Query: 219 MTGVRNAVEV 228
++ A++
Sbjct: 67 VSAAEAAIKA 76
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + ++ E+ + F +G +SS VV+R + C+ FV FE A
Sbjct: 201 KFNNVYVKNLGENTTDDELKKVFGAYGPISS-AVVMRDNEGKSKCFGFVNFELADDAAKA 259
Query: 226 VEVC 229
VE
Sbjct: 260 VEAL 263
>gi|47216826|emb|CAG10148.1| unnamed protein product [Tetraodon nigroviridis]
Length = 761
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG L + K YAF+ F+D + V+
Sbjct: 504 RKVFVGGLPPDIDEDEITASFRRFGHLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQAL 563
Query: 226 VEVCI 230
++ CI
Sbjct: 564 IDACI 568
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVI--RSRKDVGICY 211
++VRNLP + +E E+ E F KFGE+S +V+ +++ GI Y
Sbjct: 267 LFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAY 310
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ E+ +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWV---ARKPPG--FAFIDFDDRRDAQDAI 134
Query: 227 E 227
Sbjct: 135 R 135
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 201 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 259
Query: 226 V 226
V
Sbjct: 260 V 260
>gi|330796400|ref|XP_003286255.1| hypothetical protein DICPUDRAFT_87071 [Dictyostelium purpureum]
gi|325083760|gb|EGC37204.1| hypothetical protein DICPUDRAFT_87071 [Dictyostelium purpureum]
Length = 265
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 175 LPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVC-ILMW 233
L PS E +I +EF KFG++ +++ + C+ FV FE+ A E C L+
Sbjct: 96 LSPSTEERDIKDEFTKFGKIDHVDLIMDRKTGRSKCFGFVYFENKDDAVRAKEECQDLIL 155
Query: 234 H 234
H
Sbjct: 156 H 156
>gi|384490634|gb|EIE81856.1| hypothetical protein RO3G_06561 [Rhizopus delemar RA 99-880]
Length = 420
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 111 PSVTPQPSVSKNI-SPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEE---- 165
PS + QP ++ SPV + H+P Q Y + A+ + +D+E
Sbjct: 120 PSRSAQPFPPLHLASPVLNTTHIPGSPPHQYLPGPYIISTADANRNNKRRPKQDQELNQH 179
Query: 166 ---EIKS-----VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVE 215
EI S +YVR LP ++++ E + +G +SS +I + +G C Y F
Sbjct: 180 LEPEINSYHTHNIYVRGLPSTITDGAFLEMCQAYGTVSSSKAIIDQK--LGECKGYGFAM 237
Query: 216 FEDMTGVRNAVE 227
FE+ A+E
Sbjct: 238 FENEKDCEEAIE 249
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++YV+NLP V + ++ + F++FGE++S V++ V + FV F + A++
Sbjct: 340 NLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQA 399
Query: 229 CILMWH 234
L +
Sbjct: 400 MHLKLY 405
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 162 EDEEEIKSVYVRNLPPS-VSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
++ + +VY+++LP S +E ++ + F++FG+++S V I++ + G +AFV +ED
Sbjct: 209 DEPRKFTNVYIKHLPESWTTEEDVQKAFEEFGKITS--VAIQTDRK-GRRFAFVNYEDFD 265
Query: 221 GVRNAVEV 228
AVE
Sbjct: 266 SAAKAVEA 273
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ E+ +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWV---ARKPPG--FAFIDFDDRRDAQDAI 134
Query: 227 E 227
Sbjct: 135 R 135
>gi|440801652|gb|ELR22661.1| nuclear transport factor 2 (ntf2) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 568
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 117 PSVSKNISPV----SDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYV 172
P V K +P S P + ET + A + A +++ V D S+YV
Sbjct: 337 PKVVKKAAPAAGDESSATGAATPAKEGETAAPAAEQSPAAPADKKV--VSDPN---SIYV 391
Query: 173 RNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCI 230
NLP + ++++ + FK FG++ V + + D G YAF+E++ + +A+++
Sbjct: 392 SNLPFAAKQTQVTDAFKGFGKI----VSVSMQNDKG--YAFIEYDTVEAAHSAIKLAT 443
>gi|348502152|ref|XP_003438633.1| PREDICTED: speckle targeted PIP5K1A-regulated poly(A)
polymerase-like [Oreochromis niloticus]
Length = 798
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 158 ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
+ A +E SV+V + P +S++++AE F++FG ++ V+I KD G+ YA V+F
Sbjct: 44 VRATRKTQEDHSVFVGGINPDISQTDLAEYFQQFGSVAD--VII--DKDKGV-YAIVQFS 98
Query: 218 DMTGVRNAVEVCI 230
+ ++ A+ CI
Sbjct: 99 ETDSIQAALS-CI 110
>gi|332026895|gb|EGI66996.1| Heterogeneous nuclear ribonucleoprotein Q [Acromyrmex echinatior]
Length = 724
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ +++ +YVRNL SE ++ E F+++G++ ++ KD
Sbjct: 367 WADPQEE----PDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIER----VKKIKD- 417
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 418 ---YAFIHFED 425
>gi|339261712|ref|XP_003367770.1| putative RNA recognition [Trichinella spiralis]
gi|316964611|gb|EFV49635.1| putative RNA recognition [Trichinella spiralis]
Length = 606
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 159 SAVEDEEEIKSV--YVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
S ++D + S+ YV NLPP + +SE+ F+++GE+ S V KD + FV+F
Sbjct: 115 SEIDDNHMMSSLTMYVGNLPPGLKQSELRAHFQRYGEVLS---VDMKHKDAPAPFCFVQF 171
Query: 217 EDMTGV 222
D +
Sbjct: 172 RDAKSI 177
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFEDMTG 221
EE+ +VY++NL V+E + E+F +FG++ S + ++ + G+C YAFV F+
Sbjct: 197 EEKYTNVYMKNLDADVNEDLLREKFSEFGKIVSLAI---AKDENGLCKGYAFVNFDKPED 253
Query: 222 VRNAVEV 228
R A E
Sbjct: 254 ARWAAET 260
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV-VIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +V+V+NLP S++ + + + FKKFG + S V K G Y FV+FE A
Sbjct: 111 VGNVFVKNLPESITNAVLQDMFKKFGNIVSCKVATFEDGKSRG--YGFVQFEQEDAAHAA 168
Query: 226 VE 227
+E
Sbjct: 169 IE 170
>gi|432948645|ref|XP_004084109.1| PREDICTED: msx2-interacting protein-like, partial [Oryzias latipes]
Length = 135
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
E + ++V NLP +V E +I E FK++G + S V+ + + G+ AFV+F D+ +
Sbjct: 3 RETRHLWVGNLPENVREDKIIEHFKRYGRVESVKVLPKRGSEGGVA-AFVDFVDIKSAQK 61
Query: 225 A 225
A
Sbjct: 62 A 62
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDV 207
+WA G++ ED V+V +L P V++ +A+ F FG LS V+ + S K
Sbjct: 91 NWAYQGQQNK--EDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 148
Query: 208 GICYAFVEFEDMTGVRNAVEVCILMW 233
G Y F+ F D T A+ W
Sbjct: 149 G--YGFLAFRDKTDAEQAIATMNGEW 172
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNAV 226
++YV NL + ++ E+ F+ FG+++S V I +D G +AFVE ED G +NAV
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTS--VKIVRDRDTGRSRGFAFVEMEDGEGAQNAV 59
>gi|432895835|ref|XP_004076185.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 2 [Oryzias latipes]
Length = 750
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 489 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 548
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 549 VQALIDACI 557
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 135 PTTQQET-VSSYAYEKSWADTGEEI---SAVEDEEEI--KSVYVRNLPPSVSESEIAEEF 188
P Q ET +S S +D+ +E SA EI K +YV LP S++E + E+F
Sbjct: 5 PRGQPETPLSHTDMSVSGSDSDKEFNPASATNGGREISRKVLYVGGLPKSINEDALNEKF 64
Query: 189 KKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
G + S ++ + G YAFVEF D G A++
Sbjct: 65 SASGPVFSV-KILNDKNKQGFNYAFVEFVDEAGAAAALQ 102
>gi|357510891|ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding protein [Medicago truncatula]
Length = 613
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
I +V+V+NL S+ S + + FKKFG + S VV+ S Y FV+FE A+
Sbjct: 97 IGNVFVKNLAESIDNSGLEDMFKKFGNILSSKVVM-SEDGKSKGYGFVQFETEESANAAI 155
Query: 227 E 227
E
Sbjct: 156 E 156
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S+YV +L P +S+S++ + F F L+S + S +CY +V F A+EV
Sbjct: 11 SLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIEV 70
>gi|268532218|ref|XP_002631237.1| C. briggsae CBR-RSP-7 protein [Caenorhabditis briggsae]
Length = 446
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 107 GQSTPSVTPQ--PSVSKNISPVSDWNHVP---QPTTQQETVSSYAYEKSWADTGEEISAV 161
G ST + Q P VS I + D N V PT +Q + +Y + D G+
Sbjct: 103 GGSTTAGQRQLPPHVSNRIQQLDDGNSVLITVDPTLEQLGLPAYPPLPADTDNGKV---- 158
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKK-FGELSSEGVVIRSRKDVGIC-YAFVEFEDM 219
EE ++VYV NLP + E+ + F FGE+ V + S D C YA+VEF
Sbjct: 159 --EEIRRTVYVGNLPKGIDGKEVLDLFNMYFGEVMY--VRMASGPDALPCAYAYVEFSQQ 214
Query: 220 TGVRNAVE 227
V NA++
Sbjct: 215 ASVSNALQ 222
>gi|340717082|ref|XP_003397017.1| PREDICTED: probable RNA-binding protein orb2-like isoform 2 [Bombus
terrestris]
Length = 426
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--I 209
++TGE S + V+V LPP + E EI F++FG L + K
Sbjct: 161 SETGERFS--------RKVFVGGLPPDIDEEEIKASFRRFGSLVVDWPHKAESKSYFPPK 212
Query: 210 CYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 213 GYAFLLFQDEASVQQLIDACI 233
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VYV NL S S+SE+ +EF +FG L S V +R G +AFVE+ED +AV+
Sbjct: 34 VYVGNLGESASKSELEKEFGRFGPLKS---VWIARNPAG--FAFVEYEDPRDASDAVK 86
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ +G L S V RK G +AF+EFED +A+
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWV---GRKPPG--FAFIEFEDRRDADDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|154338565|ref|XP_001565507.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062556|emb|CAM42420.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 681
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVEFEDM 219
D E +++V LP SV + E+ E F+K GE+ S V+ I + + GI AFV+F+ +
Sbjct: 226 NDAEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGI--AFVKFKSI 283
Query: 220 TGVRNAVEV 228
NAV+
Sbjct: 284 EHAENAVDA 292
>gi|410920992|ref|XP_003973967.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
2-like [Takifugu rubripes]
Length = 752
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG L + K YAF+ F++ T V+
Sbjct: 495 RKVFVGGLPPDIDEDEITSSFRRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQAL 554
Query: 226 VEVCI 230
+E C+
Sbjct: 555 IEACM 559
>gi|367041355|ref|XP_003651058.1| hypothetical protein THITE_2073045 [Thielavia terrestris NRRL 8126]
gi|346998319|gb|AEO64722.1| hypothetical protein THITE_2073045 [Thielavia terrestris NRRL 8126]
Length = 1085
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
++ + E SV+V NLP +++++ + F++FG +++ +VI+ R D + A VEF
Sbjct: 599 LKRDRENTSVWVSNLPRDATQTKLKQFFREFGHINN--IVIQKRDDAAV--ALVEFRTAD 654
Query: 221 GVRNAV 226
R+A+
Sbjct: 655 DARSAL 660
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+A + ++YV L P V++ ++AE F KFGE+ +++ C FV F
Sbjct: 230 TATSSQSTHANLYVNRLEPQVTKEDLAEAFSKFGEVVETKILVDPNTGSSRCVGFVHF-- 287
Query: 219 MTGVRNAVEVCILM 232
+ RNA+ M
Sbjct: 288 -SARRNALTALSAM 300
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D + + ++ + N+P S ++ + F FGE+ S VV + + Y FV++ G
Sbjct: 148 DLDALTNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGA 207
Query: 223 RNAVE 227
A+E
Sbjct: 208 TAAIE 212
>gi|242083908|ref|XP_002442379.1| hypothetical protein SORBIDRAFT_08g019140 [Sorghum bicolor]
gi|241943072|gb|EES16217.1| hypothetical protein SORBIDRAFT_08g019140 [Sorghum bicolor]
Length = 441
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
+WAD + ++ +IKS +V NLP V+E + + F++FGE+ + SRK G
Sbjct: 10 NWADKESHVDP-DEMAKIKSAFVGNLPEDVNEEYLRKLFEQFGEVVRVAI---SRK--GQ 63
Query: 210 C-YAFVEFEDMTGVRNAVE 227
C FV F + + + NA+E
Sbjct: 64 CPVGFVHFANRSELENAIE 82
>gi|241626818|ref|XP_002409727.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
gi|215503224|gb|EEC12718.1| RNA binding protein NAPOR-3, putative [Ixodes scapularis]
Length = 139
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 36/63 (57%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++++ +LP ++S++A+ F FG + S V I + ++ C+ FV +++ + A
Sbjct: 52 EGANLFIYHLPQEFTDSDLAQTFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNSLSAQAA 111
Query: 226 VEV 228
++
Sbjct: 112 IQA 114
>gi|350416345|ref|XP_003490918.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
2-like, partial [Bombus impatiens]
Length = 395
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 18/85 (21%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL------SSEGVVIRSRK 205
++TGE S + V+V LPP + E EI F++FG L +E K
Sbjct: 161 SETGERFS--------RKVFVGGLPPDIDEEEIKASFRRFGSLVVDWPHKAESKSYFPPK 212
Query: 206 DVGICYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 213 G----YAFLLFQDEASVQQLIDACI 233
>gi|156399642|ref|XP_001638610.1| predicted protein [Nematostella vectensis]
gi|156225732|gb|EDO46547.1| predicted protein [Nematostella vectensis]
Length = 411
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WA+ +E+ E +++K +Y RNL S +E I + F KFGE+ ++ KD
Sbjct: 216 WAEPEQEVDQ-EIMDQVKVLYARNLLLSTTEETIEQAFSKFGEVER----VKKIKD---- 266
Query: 211 YAFVEFEDMTGVRNAVE 227
Y F+ F R+A+E
Sbjct: 267 YCFIHFRTKEQARDAME 283
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ +G L S V RK G +AF+EFED +A+
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWV---GRKPPG--FAFIEFEDRRDADDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + +I + F KFG+++ V +++R+ G +AFVEF+D +AV
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVTF--VDLKNRR--GPPFAFVEFDDPRDAEDAVHA 65
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
E S+YV L P+VSE+ + + F G +SS V + + YA+V F D R
Sbjct: 36 ETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGR 95
Query: 224 NAVEV----------CILMW 233
A+E C +MW
Sbjct: 96 QAIEKLNYTPIKGQPCRIMW 115
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
Query: 55 SENILEDS--PAEELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPS 112
S N+ +D P N SL N A++YL + + RV S S
Sbjct: 309 STNLRQDGVPPILRFN-SLSINTNVARNYLSSEKGYSAHTQNSSAQSPHPRVFSANSAFS 367
Query: 113 VTPQPSVSKNIS---PVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS 169
T P ++ + S P S P + S +++ A T + + +
Sbjct: 368 TTSPPPLTPSTSRDYPFSASTISPSTPFSAYSSSHGIHQRIPASTPTNTNPADQNPPCNT 427
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED----MTGVRNA 225
+YV NLPPS SE E+ F ++ + + R++ + +C FVEFE+ M ++N
Sbjct: 428 IYVGNLPPSTSEEELKVLFST--QVGYKRLCFRTKGNGPMC--FVEFENIPYAMEALKNL 483
Query: 226 VEVCI 230
VC+
Sbjct: 484 QGVCL 488
>gi|146197780|dbj|BAF57609.1| polyadenylate-binding protein [Dugesia japonica]
Length = 216
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 17/78 (21%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFG-----ELSSEGVVIRSRKDVGIC 210
EE+S +E+ K++Y+ LP SV+E ++ F+ +G EL+SE C
Sbjct: 3 EEMSKMENRN-TKTIYISCLPNSVTEEDLLSIFENYGLCVSCELNSEE-----------C 50
Query: 211 YAFVEFEDMTGVRNAVEV 228
A+VEF++ T RNA+ +
Sbjct: 51 TAYVEFDNETSARNALSM 68
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|357124980|ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 185
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P+V+ E+ +EF+ FG L S V +RK G +AF++F+D ++A+
Sbjct: 1 MARVYVGNLDPAVTARELEDEFRVFGVLRSVWV---ARKPPG--FAFIDFDDRRDAQDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED+ +A+
Sbjct: 33 RTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP---PGYAFVEFEDVQDAEDAIR 89
>gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +V+V+NL ++ ++ E F FG +SS VV+R C+ FV F++ A
Sbjct: 28 KFNNVFVKNLAEETTDEDLMEVFGGFGPISS-AVVMRDANGNSKCFGFVNFKNADDAAKA 86
Query: 226 VE 227
VE
Sbjct: 87 VE 88
>gi|410898108|ref|XP_003962540.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Takifugu
rubripes]
Length = 539
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD E+ E ++K ++VRNL SV+E + + F +FG+L ++ KD
Sbjct: 322 WADPLEDPDP-EVMAKVKVLFVRNLASSVTEELLEKAFSQFGKLER----VKKLKD---- 372
Query: 211 YAFVEFEDMTGVRNAV 226
YAF+ FE+ G A+
Sbjct: 373 YAFIHFEERDGAVKAL 388
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+VY++++P S +E +I EEF FGE++S V + G +AFV + + R AVE
Sbjct: 106 NVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPK---GRRFAFVNYAEFEQARAAVE 161
>gi|195445733|ref|XP_002070461.1| GK11018 [Drosophila willistoni]
gi|194166546|gb|EDW81447.1| GK11018 [Drosophila willistoni]
Length = 419
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ I ++YV NLP ++E EI ++F +FGE+ S +V R + AFV++ +
Sbjct: 227 EDRNITTLYVGNLPEEITEPEIRDQFYQFGEIRSIALVPRQQ------CAFVQYTKRSAA 280
Query: 223 RNAVE 227
A E
Sbjct: 281 ELAAE 285
>gi|41055809|ref|NP_957275.1| cytoplasmic polyadenylation element-binding protein 4 [Danio rerio]
gi|82240179|sp|Q7SXN4.1|CPEB4_DANRE RecName: Full=Cytoplasmic polyadenylation element-binding protein
4; Short=CPE-BP4; Short=CPE-binding protein 4;
Short=CPEB-4
gi|33416351|gb|AAH55522.1| Cytoplasmic polyadenylation element binding protein 4 [Danio rerio]
gi|182890018|gb|AAI65168.1| Cpeb4 protein [Danio rerio]
Length = 635
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 374 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 433
Query: 222 VRNAVEVCI 230
V+ ++ C+
Sbjct: 434 VQALIDACM 442
>gi|432895833|ref|XP_004076184.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 1 [Oryzias latipes]
Length = 725
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 464 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 523
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 524 VQALIDACI 532
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 88 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 147
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 148 PRGFGFITFEDEQSVDQAVNM 168
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
A + + DTG E + + ++VYV NL PS++E I F + G ++ V+
Sbjct: 58 AAQNAGFDTGSE------DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTN 111
Query: 206 DVGICYAFVEFED 218
D YAFVEF D
Sbjct: 112 DP---YAFVEFAD 121
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 165 EEIKS----VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFED 218
EE+K+ VYV+N+ P V++ E E F K+G+++S + SR D G + FV + D
Sbjct: 224 EEMKANFTNVYVKNIDPEVTDEEFRELFGKYGDITSATI---SRDDSGKSRGFGFVNYVD 280
Query: 219 MTGVRNAVE 227
++AV+
Sbjct: 281 HQNAQSAVD 289
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D +A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWV---ARKPPG--FAFIDFDDRRDAEDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|307170912|gb|EFN63015.1| CUG-BP- and ETR-3-like factor 1 [Camponotus floridanus]
Length = 395
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 110 TPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKS 169
TP Q S+S S + + P T ++ + + +T ++I + E +
Sbjct: 256 TPLNGLQDSLSNAYSSLQQYAGFPAFTAAAAAAAAATQKTKFTNTDKQI----EGPEGCN 311
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+++ +LP S++++ F FG + S V I + C+ FV +++ T + A++
Sbjct: 312 LFIYHLPQEFSDTDLISTFLPFGNVISAKVFIDKHTHMSKCFGFVSYDNATSAQMAIQT 370
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E IS + ++++ N+P + E+A F+ FG++ S V + + C+ F+
Sbjct: 329 EAISLMFSGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFIS 388
Query: 216 FEDMTGVRNAV 226
++ +NA+
Sbjct: 389 YDSQAAAQNAI 399
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ ++YV+NL S ++ ++ F++ G ++S VV+R C+ FV FE++ A
Sbjct: 208 KFNNIYVKNLAESTTDEDLKSIFEEHGAITS-AVVMRDADGKSKCFGFVNFENVDDAAKA 266
Query: 226 VE 227
VE
Sbjct: 267 VE 268
>gi|154147563|ref|NP_001093751.1| heterogeneous nuclear ribonucleoprotein L [Xenopus (Silurana)
tropicalis]
gi|140832702|gb|AAI35425.1| hnrpl protein [Xenopus (Silurana) tropicalis]
Length = 538
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V+VR L V E+++AE ++FG +S V+ + R+ A VEFED+ G NAV
Sbjct: 53 VHVRGLIDGVVEADLAEALQEFGTISYVVVMPKKRQ------ALVEFEDILGACNAV 103
>gi|432895837|ref|XP_004076186.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 3 [Oryzias latipes]
Length = 733
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 472 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 531
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 532 VQALIDACI 540
>gi|390354284|ref|XP_789277.2| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like [Strongylocentrotus purpuratus]
Length = 457
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D
Sbjct: 197 ERYSRKVFVGGLPPDIDEDEITASFRRFGSLVVDWPHKAESKSYFPPKGYAFLLFQDERS 256
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 257 VQALIDACI 265
>gi|449676978|ref|XP_002157894.2| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Hydra
magnipapillata]
Length = 623
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 151 WADTGEEISAVEDE--EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
WAD EE +D ++K VYVRNL P++ E+++ E FK++G + ++ KD
Sbjct: 325 WADPVEE---PDDNVMSKVKVVYVRNLSPAIEETKLNELFKQYGAVEK----VKKLKD-- 375
Query: 209 ICYAFVEFEDMTGVRNAVE 227
YAF+ F + A+E
Sbjct: 376 --YAFIHFVNRDDAVRAIE 392
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ +G L S V RK G +AF+EFED +A+
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWV---GRKPPG--FAFIEFEDRRDADDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
E + + ++YV+NL V++ E + F KFGE++S VV + + + FV F+D
Sbjct: 231 EQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTS-AVVQKDEEGKSKGFGFVNFKDHES 289
Query: 222 VRNAVEV 228
+ AV+
Sbjct: 290 AQAAVDA 296
>gi|229442309|gb|AAI72877.1| spen homolog, transcriptional regulator [synthetic construct]
Length = 1113
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+ EI +EF+ FG L S V +RK G +AF++F+D +A+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWV---ARKPPG--FAFIDFDDRRDAEDAI 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
+ +VYV+NL + +E ++ F +G +SS VV+R C+ FV FE A
Sbjct: 205 KFNNVYVKNLGENTTEDDLKNVFGAYGTISS-AVVMRDSDGKSKCFGFVNFEHPDNAAKA 263
Query: 226 VEVC 229
VE
Sbjct: 264 VEAL 267
>gi|52221255|gb|AAU29548.1| poly(A)-binding protein [Crithidia fasciculata]
Length = 564
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 165 EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG-----ICYAFVEFEDM 219
++ ++YV+NL P+V++S++ F K+GE+SS V +D+G + + +V FE
Sbjct: 180 KQFTNLYVKNLEPTVTDSKLRAFFAKYGEVSSAKV-----RDLGDAQSEVGFGYVAFEKH 234
Query: 220 TGVRNAVE 227
AVE
Sbjct: 235 EDAAKAVE 242
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
SVYV N+P VSE EI + F G +++ +V +AFVEF D G + AVE
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVE 65
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 160 AVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDM 219
A +D K ++VR LP ++ + F+++GE++ VV+ Y FV F+ M
Sbjct: 155 ACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSM 214
Query: 220 TGVRNAVE 227
G A+E
Sbjct: 215 DGAHAALE 222
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ N+P + E+A F+ FG++ S V + + C+ F+ ++ +NA+
Sbjct: 340 NLFIYNIPREFGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 397
>gi|74141454|dbj|BAB27533.3| unnamed protein product [Mus musculus]
Length = 381
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 294 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 344
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 345 YAFVHFEDRGAAVKAMD 361
>gi|384500196|gb|EIE90687.1| hypothetical protein RO3G_15398 [Rhizopus delemar RA 99-880]
Length = 213
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
D G E +D + ++Y NLP E ++A F+++G L S V + + + +A
Sbjct: 127 DRGSE----QDRKSSTTIYAGNLPYDFIERDVATMFERYGRLKSITVPLDTVTNKNKGFA 182
Query: 213 FVEFEDMTGVRNAVE 227
FVEFED +A E
Sbjct: 183 FVEFEDRQDAEDAFE 197
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
DTG E + + ++VYV NL PS++E I F + G ++ V+ D YA
Sbjct: 38 DTGSE------DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YA 88
Query: 213 FVEFED 218
FVEF D
Sbjct: 89 FVEFAD 94
>gi|427786277|gb|JAA58590.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 211
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 36/63 (57%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++++ +LP ++S++A+ F FG + S V I + ++ C+ FV +++ + A
Sbjct: 124 EGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNSLSAQAA 183
Query: 226 VEV 228
++
Sbjct: 184 IQA 186
>gi|350535755|ref|NP_001233020.1| uncharacterized protein LOC100167805 [Acyrthosiphon pisum]
gi|239788448|dbj|BAH70906.1| ACYPI008564 [Acyrthosiphon pisum]
Length = 290
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 138 QQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSE 197
QQ+ ++ A + + + V D++ + ++V L +E +++E F +FGE+ +
Sbjct: 21 QQQHLNGTAENSTTNNDSGQFECVRDDD--RKIFVGGLKGETTEKDLSEHFGQFGEIENI 78
Query: 198 GVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V + + +AF+ ++ M G+ NA+
Sbjct: 79 NVKVDAATGRARGFAFIVYKTMEGLDNAL 107
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYA 212
DTG E + + ++VYV NL PS++E I F + G ++ V+ D YA
Sbjct: 65 DTGSE------DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YA 115
Query: 213 FVEFED 218
FVEF D
Sbjct: 116 FVEFAD 121
>gi|157819511|ref|NP_001100462.1| cytoplasmic polyadenylation element-binding protein 4 [Rattus
norvegicus]
gi|149052215|gb|EDM04032.1| cytoplasmic polyadenylation element binding protein 4 (predicted)
[Rattus norvegicus]
Length = 721
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 460 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 519
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 520 VQALIDACI 528
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 83 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 142
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 143 PRGFGFITFEDEQSVDQAVNM 163
>gi|410949188|ref|XP_003981305.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Felis catus]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED+ +A+
Sbjct: 33 RTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP---PGYAFVEFEDVQDAEDAIR 89
>gi|354477328|ref|XP_003500873.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Cricetulus griseus]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 146 AYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
A + + DTG E + + ++VYV NL PS++E I F + G ++ V+
Sbjct: 77 AAQNAGFDTGSE------DHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTN 130
Query: 206 DVGICYAFVEFED 218
D YAFVEF D
Sbjct: 131 DP---YAFVEFAD 140
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 146 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 205
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 206 PRGFGFITFEDEQSVDQAVNM 226
>gi|395817027|ref|XP_003781979.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Otolemur garnettii]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|344236923|gb|EGV93026.1| Ras and Rab interactor-like protein [Cricetulus griseus]
Length = 651
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 163 DEEEIKS--VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
D EE++ V++R L V E+++ E ++FG +S V+ + R+ A VEFED+
Sbjct: 350 DPEELRGEVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQ------ALVEFEDVL 403
Query: 221 GVRNAV 226
G NAV
Sbjct: 404 GACNAV 409
>gi|335304067|ref|XP_003134091.2| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Sus scrofa]
Length = 729
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|327265372|ref|XP_003217482.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 1 [Anolis carolinensis]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|313239224|emb|CBY14179.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 151 WADTGEEISAVEDE--EEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG 208
WAD I+ D+ +++K +YV+NL VSE +++ F FGE+ ++ KD
Sbjct: 335 WADP---INTPADDIMDKVKVLYVKNLATCVSEDIVSQTFAAFGEIEK----VKKLKD-- 385
Query: 209 ICYAFVEFEDMTGVRNAV 226
YAFV F++ R+A+
Sbjct: 386 --YAFVHFKNRDEARSAM 401
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE A+E E +++RN+ +E + E F KFGEL + + +R +A+V+
Sbjct: 319 EEEVAIEKISETGRLFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQ 378
Query: 216 FEDMTGVRNAVEVCI 230
F+D ++AVE I
Sbjct: 379 FKD---PKDAVEAYI 390
>gi|225470686|ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
Length = 751
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 142 VSSYAYEKSWADTGEEISAVED-------EEEIKSVYVRNLPPSVSESEIAEEFKKFGEL 194
SS W +G EI + D E +YV LP ++ E+ +AE F FG++
Sbjct: 480 ASSQGSNSLWGSSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKI 539
Query: 195 SSEGVVIRSRKDVGICYAFVEFED 218
+ V+ + Y FV+FE+
Sbjct: 540 AKTKVIKDRATGISKGYGFVKFEN 563
>gi|448878399|gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens subsp. patens]
Length = 137
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ +G L S V RK G +AF+EFED +A+
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWV---GRKPPG--FAFIEFEDRRDADDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D+ +V+V+NL S E E+ + F +FG ++S V++ C+ FV FE+
Sbjct: 201 DKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSV-AVMKDEDGKSRCFGFVNFENAEDA 259
Query: 223 RNAVEVC 229
AVE
Sbjct: 260 ARAVEAL 266
>gi|4929470|gb|AAD34009.1|AF148690_1 RNA-binding protein XlhnRNPL [Xenopus laevis]
Length = 273
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V+VR L V E ++AE ++FG +S V+ + R+ A VEFED+ G NAV
Sbjct: 53 VHVRGLIDGVVEPDLAEALQEFGTISYVVVMPKKRQ------ALVEFEDINGACNAV 103
>gi|403290134|ref|XP_003936186.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Saimiri boliviensis boliviensis]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|308818179|ref|NP_001184215.1| cytoplasmic polyadenylation element binding protein 4 [Xenopus
laevis]
gi|296396362|gb|ADH10187.1| cytoplasmic polyadenylation element binding protein 4 [Xenopus
laevis]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|410949190|ref|XP_003981306.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Felis catus]
Length = 712
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|328780122|ref|XP_001120595.2| PREDICTED: probable RNA-binding protein orb2-like [Apis mellifera]
gi|380023053|ref|XP_003695344.1| PREDICTED: probable RNA-binding protein orb2-like [Apis florea]
Length = 395
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--I 209
++TGE S + V+V LPP + E EI F++FG L + K
Sbjct: 130 SETGERFS--------RKVFVGGLPPDIDEEEIKASFRRFGSLVVDWPHKAESKSYFPPK 181
Query: 210 CYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 182 GYAFLLFQDEASVQQLIDACI 202
>gi|50511043|dbj|BAD32507.1| mKIAA1673 protein [Mus musculus]
gi|115527506|gb|AAI15431.1| Cpeb4 protein [Mus musculus]
gi|115527662|gb|AAI15432.1| Cpeb4 protein [Mus musculus]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|410949186|ref|XP_003981304.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Felis catus]
Length = 729
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|354477326|ref|XP_003500872.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Cricetulus griseus]
Length = 729
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 70 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 129
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 130 PRGFGFITFEDEQSVDQAVNM 150
>gi|189233716|ref|XP_969331.2| PREDICTED: similar to orb2 CG5735-PB [Tribolium castaneum]
Length = 629
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTGVRNA 225
+ V+V LPP + E EI F++FG L + K YAF+ F+D V++
Sbjct: 372 RKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDENSVQSL 431
Query: 226 VEVCI 230
++ CI
Sbjct: 432 IDACI 436
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P +E E+ +EF+ +G L S V RK G +AF+EFED +A+
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWV---GRKPPG--FAFIEFEDRRDADDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|149726066|ref|XP_001502856.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Equus caballus]
Length = 712
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|114603431|ref|XP_001155372.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 5 [Pan troglodytes]
gi|426351052|ref|XP_004043072.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Gorilla gorilla gorilla]
gi|380816760|gb|AFE80254.1| cytoplasmic polyadenylation element-binding protein 4 [Macaca
mulatta]
gi|383421805|gb|AFH34116.1| cytoplasmic polyadenylation element-binding protein 4 [Macaca
mulatta]
gi|410357619|gb|JAA44575.1| cytoplasmic polyadenylation element binding protein 4 [Pan
troglodytes]
Length = 721
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 460 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 519
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 520 VQALIDACI 528
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 122 ERTRPKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 181
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 182 PRGFGFITFEDEQSVDQAVNM 202
>gi|426246289|ref|XP_004016927.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Ovis aries]
Length = 712
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|335304069|ref|XP_003359862.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Sus scrofa]
Length = 712
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 139 ERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 198
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 199 PRGFGFITFEDEQSVDQAVNM 219
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 118 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 177
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 178 PRGFGFITFEDEQSVDQAVNM 198
>gi|297295753|ref|XP_001097847.2| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Macaca mulatta]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|291387844|ref|XP_002710434.1| PREDICTED: cytoplasmic polyadenylation element binding protein 4
[Oryctolagus cuniculus]
Length = 729
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|170062828|ref|XP_001866838.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880603|gb|EDS43986.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 85
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++ +++ NLP +VS E+ F KFG + S V+ + Y F+ F G NA
Sbjct: 7 VQKLFIGNLPWTVSTKELQGYFSKFGHVQSSNVIYDKTTGLSRGYGFIVFSTRDGYANAT 66
Query: 227 E 227
Sbjct: 67 N 67
>gi|114603435|ref|XP_001155244.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Pan troglodytes]
gi|297676706|ref|XP_002816262.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Pongo abelii]
gi|397485862|ref|XP_003814057.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Pan paniscus]
gi|402873445|ref|XP_003900585.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Papio anubis]
gi|426351056|ref|XP_004043074.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 4 [Gorilla gorilla gorilla]
gi|219520698|gb|AAI43960.1| CPEB4 protein [Homo sapiens]
Length = 704
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 443 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 502
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 503 VQALIDACI 511
>gi|426246287|ref|XP_004016926.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Ovis aries]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|358417708|ref|XP_003583720.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Bos taurus]
gi|359077354|ref|XP_003587551.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Bos taurus]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|52138749|ref|NP_080528.2| cytoplasmic polyadenylation element-binding protein 4 [Mus
musculus]
gi|81912024|sp|Q7TN98.1|CPEB4_MOUSE RecName: Full=Cytoplasmic polyadenylation element-binding protein
4; Short=CPE-BP4; Short=CPE-binding protein 4;
Short=mCPEB-4
gi|33518723|gb|AAQ20844.1| cytoplasmic polyadenylation element binding protein 4 [Mus
musculus]
gi|148877895|gb|AAI45864.1| Cytoplasmic polyadenylation element binding protein 4 [Mus
musculus]
gi|148878322|gb|AAI45866.1| Cytoplasmic polyadenylation element binding protein 4 [Mus
musculus]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE- 227
S+YV L PSVSE+ + + F G ++S V + + YA+V F D + A+E
Sbjct: 48 SLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIEK 107
Query: 228 ---------VCILMW 233
+C +MW
Sbjct: 108 LNYTPIKGKLCRIMW 122
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 52 ERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 111
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 112 PRGFGFITFEDEQSVDQAVNM 132
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
+VYV+NLP +++ E+ + F K+G++SS VV++ + + FV F
Sbjct: 240 NVYVKNLPKEITDDELKKTFGKYGDISS-AVVMKDQSGNSRSFGFVNF 286
>gi|296193612|ref|XP_002744608.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Callithrix jacchus]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|28573264|ref|NP_649440.3| CG14641 [Drosophila melanogaster]
gi|16769690|gb|AAL29064.1| LD46870p [Drosophila melanogaster]
gi|28381138|gb|AAF52166.2| CG14641 [Drosophila melanogaster]
gi|220956458|gb|ACL90772.1| CG14641-PA [synthetic construct]
Length = 418
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ I ++YV NLP ++E E+ ++F +FGE+ S +V R + AFV++
Sbjct: 227 EDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQ------CAFVQYTK---- 276
Query: 223 RNAVEV 228
RNA E+
Sbjct: 277 RNAAEL 282
>gi|403290132|ref|XP_003936185.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Saimiri boliviensis boliviensis]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|149726064|ref|XP_001502854.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Equus caballus]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|358417706|ref|XP_003583719.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Bos taurus]
gi|359077351|ref|XP_003587550.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Bos taurus]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|73953380|ref|XP_866373.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 10 [Canis lupus familiaris]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
+VYV+NLP +++ E+ + F K+G++SS VV++ + + FV F
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISS-AVVMKDQSGNSRSFGFVNF 272
>gi|403290130|ref|XP_003936184.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Saimiri boliviensis boliviensis]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 83 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 142
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 143 PRGFGFITFEDEQSVDQAVNM 163
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|344265285|ref|XP_003404715.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
[Loxodonta africana]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|301763112|ref|XP_002916973.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like [Ailuropoda melanoleuca]
gi|281351245|gb|EFB26829.1| hypothetical protein PANDA_005123 [Ailuropoda melanoleuca]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+YV NLPP + +I + F KFG+++ + +++R+ G +AFVEFED
Sbjct: 10 IYVGNLPPDIRTKDIEDLFYKFGKITF--IDLKNRR--GPPFAFVEFED 54
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ ++YV NL +E E+ F+++GE+S+ +++ +AFVE D G ++A+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 227 E 227
E
Sbjct: 114 E 114
>gi|431918163|gb|ELK17391.1| Cytoplasmic polyadenylation element-binding protein 4 [Pteropus
alecto]
Length = 721
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 460 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 519
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 520 VQALIDACI 528
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
D+ +V+V+NL S E E+ + F +FG ++S V++ C+ FV FE+
Sbjct: 201 DKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSV-AVMKDEDGKSRCFGFVNFENAEDA 259
Query: 223 RNAVEVC 229
AVE
Sbjct: 260 ARAVEAL 266
>gi|73953382|ref|XP_852818.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Canis lupus familiaris]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ ++YV NL +E E+ F+++GE+S+ +++ +AFVE D G ++A+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 227 E 227
E
Sbjct: 114 E 114
>gi|332248285|ref|XP_003273295.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic polyadenylation
element-binding protein 4 [Nomascus leucogenys]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ ++YV NL +E E+ F+++GE+S+ +++ +AFVE D G ++A+
Sbjct: 54 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 113
Query: 227 E 227
E
Sbjct: 114 E 114
>gi|194898376|ref|XP_001978788.1| GG11763 [Drosophila erecta]
gi|190650491|gb|EDV47746.1| GG11763 [Drosophila erecta]
Length = 418
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ I ++YV NLP ++E E+ ++F +FGE+ S +V R + AFV++
Sbjct: 227 EDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQ------CAFVQYTK---- 276
Query: 223 RNAVEV 228
RNA E+
Sbjct: 277 RNAAEL 282
>gi|119581794|gb|EAW61390.1| cytoplasmic polyadenylation element binding protein 4, isoform
CRA_b [Homo sapiens]
gi|119581795|gb|EAW61391.1| cytoplasmic polyadenylation element binding protein 4, isoform
CRA_b [Homo sapiens]
Length = 741
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 480 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 539
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 540 VQALIDACI 548
>gi|297282271|ref|XP_002808320.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein-like
[Macaca mulatta]
Length = 3672
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + ++V NLP +V E +I E FK++G + S ++ + + G+ AFV+F D+ + A
Sbjct: 4 ETRHLWVGNLPENVREEKIIELFKRYGRVESVKILPKRGSEGGVA-AFVDFVDIKSAQKA 62
>gi|291240455|ref|XP_002740134.1| PREDICTED: cytoplasmic polyadenylation element binding protein
2-like [Saccoglossus kowalevskii]
Length = 686
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D
Sbjct: 425 ERYSRKVFVGGLPPDIDEEEITASFRRFGSLVVDWPHKAESKSYFPPKGYAFLLFQDERS 484
Query: 222 VRNAVEVCI 230
V+ ++ C+
Sbjct: 485 VQELIDACL 493
>gi|195496994|ref|XP_002095913.1| GE25369 [Drosophila yakuba]
gi|194182014|gb|EDW95625.1| GE25369 [Drosophila yakuba]
Length = 418
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ I ++YV NLP ++E E+ ++F +FGE+ S +V R + AFV++
Sbjct: 227 EDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQ------CAFVQYTK---- 276
Query: 223 RNAVEV 228
RNA E+
Sbjct: 277 RNAAEL 282
>gi|441656584|ref|XP_003277097.2| PREDICTED: DAZ-associated protein 1 [Nomascus leucogenys]
gi|119589910|gb|EAW69504.1| DAZ associated protein 1, isoform CRA_d [Homo sapiens]
Length = 337
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 52 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 111
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 112 PRGFGFITFEDEQSVDQAVNM 132
>gi|189027090|ref|NP_085130.2| cytoplasmic polyadenylation element-binding protein 4 [Homo
sapiens]
gi|114603429|ref|XP_001155432.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 6 [Pan troglodytes]
gi|297676704|ref|XP_002816261.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Pongo abelii]
gi|397485858|ref|XP_003814055.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Pan paniscus]
gi|402873443|ref|XP_003900584.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Papio anubis]
gi|426351050|ref|XP_004043071.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Gorilla gorilla gorilla]
gi|119368635|sp|Q17RY0.1|CPEB4_HUMAN RecName: Full=Cytoplasmic polyadenylation element-binding protein
4; Short=CPE-BP4; Short=CPE-binding protein 4;
Short=hCPEB-4
gi|109658954|gb|AAI17151.1| Cytoplasmic polyadenylation element binding protein 4 [Homo
sapiens]
gi|119581793|gb|EAW61389.1| cytoplasmic polyadenylation element binding protein 4, isoform
CRA_a [Homo sapiens]
gi|313883252|gb|ADR83112.1| cytoplasmic polyadenylation element binding protein 4 [synthetic
construct]
gi|355691858|gb|EHH27043.1| hypothetical protein EGK_17145 [Macaca mulatta]
gi|355750436|gb|EHH54774.1| hypothetical protein EGM_15673 [Macaca fascicularis]
gi|380783543|gb|AFE63647.1| cytoplasmic polyadenylation element-binding protein 4 [Macaca
mulatta]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEF 216
+VYV+NLP +++ E+ + F K+G++SS VV++ + + FV F
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISS-AVVMKDQSGNSRSFGFVNF 272
>gi|410951403|ref|XP_003982387.1| PREDICTED: putative RNA-binding protein 15B [Felis catus]
Length = 1145
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 581 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 639
Query: 216 FEDM 219
F+++
Sbjct: 640 FQNL 643
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 110 ERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 169
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 170 PRGFGFITFEDEQSVDQAVNM 190
>gi|297850860|ref|XP_002893311.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
gi|297339153|gb|EFH69570.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
Length = 162
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P V+E E+ +EF+ FG L + V +R+ G YAF+EF+D +A+
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFRIFGVLRN---VWVARRPPG--YAFLEFDDERDALDAI 55
Query: 227 EV 228
Sbjct: 56 RA 57
>gi|296193616|ref|XP_002744610.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Callithrix jacchus]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++E+ +V+V+N+ ++E ++ F +FG ++S VV+R C+ FV FE++
Sbjct: 204 NKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSV-VVMRDGDGKSKCFGFVNFENVDDA 262
Query: 223 RNAVEVC 229
+VE
Sbjct: 263 AMSVEAL 269
>gi|114603433|ref|XP_001155308.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 4 [Pan troglodytes]
gi|297676708|ref|XP_002816263.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Pongo abelii]
gi|397485860|ref|XP_003814056.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Pan paniscus]
gi|402873447|ref|XP_003900586.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Papio anubis]
gi|426351054|ref|XP_004043073.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 3 [Gorilla gorilla gorilla]
gi|12697891|dbj|BAB21764.1| KIAA1673 protein [Homo sapiens]
gi|119581796|gb|EAW61392.1| cytoplasmic polyadenylation element binding protein 4, isoform
CRA_c [Homo sapiens]
gi|168278939|dbj|BAG11349.1| cytoplasmic polyadenylation element-binding protein 4 [synthetic
construct]
gi|219520118|gb|AAI43959.1| CPEB4 protein [Homo sapiens]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 223
+ + +VYV+NL S ++ E+ F ++G ++S +++R C+ FV FE+
Sbjct: 210 KTKFNNVYVKNLSESTTDEELMINFGEYGTITS-ALIMRDADGKSRCFGFVNFENPDDAA 268
Query: 224 NAVE 227
AVE
Sbjct: 269 KAVE 272
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|327265374|ref|XP_003217483.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like isoform 2 [Anolis carolinensis]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|195343343|ref|XP_002038257.1| GM10722 [Drosophila sechellia]
gi|195568111|ref|XP_002102061.1| GD19696 [Drosophila simulans]
gi|194133278|gb|EDW54794.1| GM10722 [Drosophila sechellia]
gi|194197988|gb|EDX11564.1| GD19696 [Drosophila simulans]
Length = 418
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ I ++YV NLP ++E E+ ++F +FGE+ S +V R + AFV++
Sbjct: 227 EDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQ------CAFVQYTK---- 276
Query: 223 RNAVEV 228
RNA E+
Sbjct: 277 RNAAEL 282
>gi|109079786|ref|XP_001098122.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 6 [Macaca mulatta]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|31874681|emb|CAD98072.1| hypothetical protein [Homo sapiens]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|395817025|ref|XP_003781978.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Otolemur garnettii]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|317008639|gb|ADU79247.1| GH13679p [Drosophila melanogaster]
Length = 202
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
++K +YVRNL VSE ++ E+F+++G++ ++ KD YAF+ FED
Sbjct: 3 KVKVLYVRNLTQDVSEDKLKEQFEQYGKVER----VKKIKD----YAFIHFED 47
>gi|225424701|ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
gi|296086540|emb|CBI32129.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ VYV NL P VSE E+ +EF+ +G + S V +R+ G YAFVEF D R+AV
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVYGVIRS---VWVARRPPG--YAFVEFADR---RDAV 52
Query: 227 EV 228
+
Sbjct: 53 DA 54
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + ES++ + F K+G + + I R CY FVEFE+ +A+
Sbjct: 7 RTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPP---CYCFVEFENARDAEDAIR 63
>gi|149018944|gb|EDL77585.1| rCG25340, isoform CRA_a [Rattus norvegicus]
gi|149018947|gb|EDL77588.1| rCG25340, isoform CRA_a [Rattus norvegicus]
Length = 254
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 6 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 61
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 62 KKLKD----YAFIHFDERDGAVKAME 83
>gi|126290868|ref|XP_001370640.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
[Monodelphis domestica]
gi|395505099|ref|XP_003756883.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Sarcophilus harrisii]
Length = 731
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 470 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 529
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 530 VQALIDACI 538
>gi|395817023|ref|XP_003781977.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 1 [Otolemur garnettii]
Length = 729
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|296225323|ref|XP_002758278.1| PREDICTED: putative RNA-binding protein 15B [Callithrix jacchus]
Length = 813
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 248 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 306
Query: 216 FEDM 219
F+++
Sbjct: 307 FQNL 310
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|109079790|ref|XP_001097943.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 4 [Macaca mulatta]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 451 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 510
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 511 VQALIDACI 519
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|389748310|gb|EIM89487.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 305
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 167 IKSVYVRNLPPSVSES--EIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRN 224
+ ++Y++NLP S+ S ++E F +FG + S + R + +G + FV FED V+
Sbjct: 43 VATIYIKNLPWSLLSSPETLSEPFSRFGSVVSAHIPARGGRPMG--FGFVTFEDPASVKA 100
Query: 225 AVE 227
A+E
Sbjct: 101 AIE 103
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE- 227
S+YV L P+VSE+ + + F G +SS V + + YA+V F D + A+E
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 228 ---------VCILMW 233
+C +MW
Sbjct: 96 LNYTPIKGRLCRIMW 110
>gi|340717080|ref|XP_003397016.1| PREDICTED: probable RNA-binding protein orb2-like isoform 1 [Bombus
terrestris]
Length = 388
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 18/85 (21%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL------SSEGVVIRSRK 205
++TGE S + V+V LPP + E EI F++FG L +E K
Sbjct: 123 SETGERFS--------RKVFVGGLPPDIDEEEIKASFRRFGSLVVDWPHKAESKSYFPPK 174
Query: 206 DVGICYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 175 G----YAFLLFQDEASVQQLIDACI 195
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|149018945|gb|EDL77586.1| rCG25340, isoform CRA_b [Rattus norvegicus]
gi|149018948|gb|EDL77589.1| rCG25340, isoform CRA_b [Rattus norvegicus]
Length = 458
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 214 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 269
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 270 KKLKD----YAFIHFDERDGAVKAME 291
>gi|157870247|ref|XP_001683674.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126740|emb|CAJ05119.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 692
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 159 SAVEDEEEIKS-VYVRNLPPSVSESEIAEEFKKFGELSSEGVV--IRSRKDVGICYAFVE 215
S ++ E++S ++V LP SV + E+ E F+K GE+ S V+ I + + GI AFV+
Sbjct: 220 SGQPNDVEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGI--AFVK 277
Query: 216 FEDMTGVRNAVEV 228
F+++ NAV+
Sbjct: 278 FKNVEHAENAVDA 290
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 90 ERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 149
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 150 PRGFGFITFEDEQSVDQAVNM 170
>gi|348581977|ref|XP_003476753.1| PREDICTED: putative RNA-binding protein 15B-like [Cavia porcellus]
Length = 891
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 326 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 384
Query: 216 FEDM 219
F+++
Sbjct: 385 FQNL 388
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
SA DE + +SVYV N+ S + +E+ E FK G ++ +++ YA++EF
Sbjct: 130 SADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNS 189
Query: 219 MTGVRNAV 226
V+NA+
Sbjct: 190 EAAVQNAI 197
>gi|221129841|ref|XP_002156950.1| PREDICTED: APOBEC1 complementation factor-like [Hydra
magnipapillata]
Length = 598
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 151 WADTGEEISAVED-EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
WA+ ++I ED +++K +Y+RNL + +E I FKKF E+ ++ KD
Sbjct: 247 WAEPEQDID--EDIMDQVKVLYIRNLQLNTTEETIENLFKKFAEVER----VKKIKD--- 297
Query: 210 CYAFVEFEDMTGVRNAVE 227
Y FV F G R A+E
Sbjct: 298 -YCFVHFVTREGARLALE 314
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
EE A+E E K +++RNL S E +I E F+ +G L V + + + +A+VE
Sbjct: 275 EEEKAIEQISESKRLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKKTNAPKGFAYVE 334
Query: 216 FED 218
F++
Sbjct: 335 FKN 337
>gi|146279166|ref|YP_001169325.1| hypothetical protein Rsph17025_3136 [Rhodobacter sphaeroides ATCC
17025]
gi|145557407|gb|ABP72020.1| hypothetical protein Rsph17025_3136 [Rhodobacter sphaeroides ATCC
17025]
Length = 162
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 63 PAEELNGSLQ--NAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVS 120
PAE+L GS++ + + L +EE +G P+ + R++ + +TP S++
Sbjct: 30 PAEKLQGSIRVEDPTDKNGFDLVERLEERIGRPEAPRFDLRYRISTSIDSVGITPSDSIT 89
Query: 121 K-NISPVSDWNHVPQPT---TQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLP 176
+ N++ ++ V + + Q TVS++ SW+ TG ++A+ EE+ K +R L
Sbjct: 90 RYNLTGRIEFTLVERASGEVVQSGTVSNFT---SWSATGSTVAALVAEEDAKYRLMRILA 146
Query: 177 PSVSESEIA 185
+ IA
Sbjct: 147 DQIVTQLIA 155
>gi|427786275|gb|JAA58589.1| Putative cugbp elav-like family member 1 [Rhipicephalus pulchellus]
Length = 219
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 36/63 (57%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++++ +LP ++S++A+ F FG + S V I + ++ C+ FV +++ + A
Sbjct: 132 EGANLFIYHLPQEFTDSDLAQTFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNSLSAQAA 191
Query: 226 VEV 228
++
Sbjct: 192 IQA 194
>gi|324500698|gb|ADY40321.1| RNA-binding protein 15B [Ascaris suum]
Length = 587
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V NLP + E+E+ F+K+G + E V I++ + YAF+ F+ +
Sbjct: 224 DDSDATRTLFVGNLPADIRETELRRVFEKYGRV--EDVDIKTPPETNAAYAFILFQTLEQ 281
Query: 222 VRNA 225
NA
Sbjct: 282 SMNA 285
>gi|307106441|gb|EFN54687.1| hypothetical protein CHLNCDRAFT_53018 [Chlorella variabilis]
Length = 247
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 134 QPTTQQETVSSYAYEKSWADTGE---EISAVEDEEEIKSVYVRNLPPSVSESEIAE---E 187
QP Q + A+ ++WA + ++ + K VYV NLP +VSE+E+ + E
Sbjct: 42 QPREIQRLQGTLAHYRNWAAQLQARYQLFNPDAARPAKRVYVGNLPAAVSEAELRQAVNE 101
Query: 188 FKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMWH 234
G+L G + +D G YAFVEF + NA+ + + +H
Sbjct: 102 LMGNGDLLFNG--MHQVQDKG--YAFVEFRSVEEASNAMALDGVKFH 144
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VY+ NLPP + + ++ + F K+G ++ V + G +AF+EF+D R+A+
Sbjct: 9 VYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTR----GAPFAFIEFDDPRDARDAIR 62
>gi|34365228|emb|CAE45953.1| hypothetical protein [Homo sapiens]
Length = 613
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 305 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 355
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 356 YAFVHFEDRGAAVKAMD 372
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|149611493|ref|XP_001512377.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
[Ornithorhynchus anatinus]
Length = 731
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 470 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 529
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 530 VQALIDACI 538
>gi|449474486|ref|XP_002196316.2| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
[Taeniopygia guttata]
Length = 711
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 450 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 509
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 510 VQALIDACI 518
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED+ +A+
Sbjct: 33 RTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP---PGYAFVEFEDVQDAEDAIR 89
>gi|348575231|ref|XP_003473393.1| PREDICTED: cytoplasmic polyadenylation element-binding protein
4-like [Cavia porcellus]
Length = 782
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 528 VQALIDACI 536
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKK--FGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
D+E + VY++NL SV E+E+ E F+K GE+ + ++ ++ G Y FVE+++ +
Sbjct: 195 DDELARVVYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNNSQG--YGFVEYKNSS 252
Query: 221 GVRNAVE 227
V+ ++
Sbjct: 253 AVQECIK 259
>gi|47230069|emb|CAG10483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 621
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
++K ++VRNL SV+E + + F +FG+L ++ KD YAF+ FE+ G A
Sbjct: 419 QVKVLFVRNLASSVTEELLEKAFSQFGKLER----VKKLKD----YAFIHFEERDGAVKA 470
Query: 226 V 226
+
Sbjct: 471 L 471
>gi|449267058|gb|EMC78024.1| Cytoplasmic polyadenylation element-binding protein 4 [Columba
livia]
Length = 706
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 442 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 501
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 502 VQALIDACI 510
>gi|395733741|ref|XP_003776287.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Pongo abelii]
Length = 890
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 325 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 383
Query: 216 FEDM 219
F+++
Sbjct: 384 FQNL 387
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 130 NHVPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
N VP+ Q+ V+ ++S T + E K +YV NLP S SE +I+E F
Sbjct: 16 NAVPESNQQENEVTQDESKESTPVTPASATEGGRETSNKILYVGNLPKSASEEQISELFS 75
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFED 218
+ S ++ + +G YAF+EF+D
Sbjct: 76 VSKPIKSI-KLLNDKNKLGFNYAFIEFDD 103
>gi|333394942|ref|ZP_08476761.1| c-terminal membrane anchored cell surface protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
Length = 354
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 18 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESE----NILEDSPAEELNGSLQN 73
+ G ++ + + D + + DY PEQR VP + N+ P ++NG +
Sbjct: 86 LNGVVEYTKTKTKADASRRYSLADYVRPEQRTVTVPAQQKKQLNLKVTMPRSQMNGVIAG 145
Query: 74 AVNAA-QDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
+ Q+ + E G ++ YA I+ + Q+T +VTPQ + K + ++ +V
Sbjct: 146 GLRLQDQNATKQTAESSKGTTVQNQYAYIIGIVLHQNTKTVTPQMKLGKVAASQVNYRNV 205
Query: 133 PQPTTQQETVS 143
T + T +
Sbjct: 206 INTTLRNVTAT 216
>gi|255569500|ref|XP_002525717.1| conserved hypothetical protein [Ricinus communis]
gi|223535017|gb|EEF36700.1| conserved hypothetical protein [Ricinus communis]
Length = 1034
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 19/77 (24%)
Query: 163 DEEE---IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI------RSRKDVGICYAF 213
DEEE +KSVY LPPS E ++ F KFGE+ E +V+ RKD +AF
Sbjct: 666 DEEELLKVKSVYAEYLPPSWDEEKLRSYFTKFGEI--ENIVLSRNLHSSRRKD----FAF 719
Query: 214 VEFEDMTGVRNAVEVCI 230
+ F R A CI
Sbjct: 720 INF----STREAALACI 732
>gi|149018946|gb|EDL77587.1| rCG25340, isoform CRA_c [Rattus norvegicus]
gi|149018949|gb|EDL77590.1| rCG25340, isoform CRA_c [Rattus norvegicus]
Length = 462
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 214 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 269
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 270 KKLKD----YAFIHFDERDGAVKAME 291
>gi|148689224|gb|EDL21171.1| mCG19533 [Mus musculus]
Length = 785
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 219 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 277
Query: 216 FEDM 219
F+++
Sbjct: 278 FQNL 281
>gi|123374542|ref|XP_001297747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878039|gb|EAX84817.1| hypothetical protein TVAG_508040 [Trichomonas vaginalis G3]
Length = 364
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 147 YEKSWADTGEEISA-VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRK 205
++ W +T E A + E S YV LP SV ESE+ E FK++ + +IR K
Sbjct: 78 FKLGWGNTTFESDADTIAKAEGFSCYVGGLPSSVKESELLEFFKRYFPNAINARLIRDEK 137
Query: 206 DVGICYAFVEFEDMTGVRNAVEVC 229
Y F++F V +A++
Sbjct: 138 GNSKGYGFIKFNKHQEVIDAIQTL 161
>gi|395505101|ref|XP_003756884.1| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
isoform 2 [Sarcophilus harrisii]
Length = 714
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 453 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 512
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 513 VQALIDACI 521
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ +++ NLPP + + ++ + F KFG L S V +RK G + FVE+ED +AV
Sbjct: 1 MAKLWIGNLPPGIPDRDVEDVFAKFGRLRSCWV---ARKPPG--FGFVEYEDRRDAEDAV 55
Query: 227 E 227
Sbjct: 56 R 56
>gi|255716954|ref|XP_002554758.1| KLTH0F13090p [Lachancea thermotolerans]
gi|238936141|emb|CAR24321.1| KLTH0F13090p [Lachancea thermotolerans CBS 6340]
Length = 145
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+S+++RN+P +S + + + FK +G + + + +RK + YA++EFE+ A++
Sbjct: 55 RSIFLRNIPVDISINLLEDHFKLYGTI-NRVTIFTNRKTFNLGYAYIEFEEDCSADQALD 113
Query: 228 V 228
+
Sbjct: 114 L 114
>gi|449266622|gb|EMC77664.1| putative RNA-binding protein 46, partial [Columba livia]
Length = 467
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD +E+ E + +K +YVRNL S +E I EF KF GVV R +K
Sbjct: 220 WADPEKEVDE-ETMQRVKVLYVRNLMMSTTEETIKAEFNKF----KPGVVERVKKLRD-- 272
Query: 211 YAFVEF 216
YAFV F
Sbjct: 273 YAFVHF 278
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+YV NLPP + +I + F KFG + + +++R+ G +AFVEFED
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRD--IDLKNRRG-GPPFAFVEFED 62
>gi|392350333|ref|XP_236613.6| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 887
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 145 YAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
Y+Y+ A E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R
Sbjct: 313 YSYQ---AVCEEDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPA 368
Query: 205 KDVGICYAFVEFEDM 219
+ G YAF++F+++
Sbjct: 369 RGQGGAYAFLKFQNL 383
>gi|363738952|ref|XP_414678.3| PREDICTED: cytoplasmic polyadenylation element-binding protein 4
[Gallus gallus]
Length = 711
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 450 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 509
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 510 VQALIDACI 518
>gi|281211243|gb|EFA85409.1| hypothetical protein PPL_02412 [Polysphondylium pallidum PN500]
Length = 458
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
S V D +E +V+V+ LP +E ++ F+ +G++ + V+I ++ + Y FV F D
Sbjct: 3 SPVPDVDEC-NVFVKFLPCEYTERDLFNLFQPYGDIVNTKVMINTKTGTSLGYGFVRFSD 61
Query: 219 MTGVRNAV 226
R A+
Sbjct: 62 PAEAREAI 69
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + ESEI + F K+G + + + R CY FVEF++ +A+
Sbjct: 7 RTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPP---CYCFVEFDNARDAEDAIR 63
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 159 SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
SA DE + +SVYV N+ S + +E+ E FK G ++ +++ YA++EF
Sbjct: 130 SADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNS 189
Query: 219 MTGVRNAV 226
V+NA+
Sbjct: 190 EAAVQNAI 197
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|47227155|emb|CAG00517.1| unnamed protein product [Tetraodon nigroviridis]
Length = 82
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+YV NLPP + +I + F KFG + + +++R+ G +AFVEFED
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRD--IDLKNRRG-GPPFAFVEFED 62
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 107 GQSTP---SVTPQPSVSKNISPVSDWNHVPQPTT-QQETVSSY---------AYEKSWAD 153
G +TP + TP ++S I V+ ++ +P PT QQ T + Y AY ++
Sbjct: 261 GTNTPPAIAATPVSAISAPIG-VNGYSSLPAPTNGQQATEALYTNGVHPYQAAYPAAYGL 319
Query: 154 TGEEI----------------SAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSE 197
G+ + E ++++ +LP S+SE+ + F FG + S
Sbjct: 320 VGQPFPQQPTLVAQQHQQPQQQQQREGPEGCNIFIYHLPQEFSDSELLQMFLPFGNVISA 379
Query: 198 GVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
V + + C+ FV F++ + A++
Sbjct: 380 KVFVDRATNQSKCFGFVSFDNPASAQAAIQ 409
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|313219579|emb|CBY30501.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
KS++VR + +V E+ EF KFG + + + R +A++EFE M RN +
Sbjct: 4 KSLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNGL 62
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 127 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 186
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 187 PRGFGFITFEDEQSVDQAVNM 207
>gi|111494085|gb|AAI10390.1| HNRPR protein [Homo sapiens]
Length = 607
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 299 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 349
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 350 YAFVHFEDRGAAVKAMD 366
>gi|441611741|ref|XP_004093062.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Nomascus leucogenys]
Length = 837
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 272 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 330
Query: 216 FEDM 219
F+++
Sbjct: 331 FQNL 334
>gi|16552365|dbj|BAB71295.1| unnamed protein product [Homo sapiens]
Length = 289
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 4 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 63
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 64 PRGFGFITFEDEQSVDQAVNM 84
>gi|425778638|gb|EKV16756.1| RNA binding protein Rnp24, putative [Penicillium digitatum PHI26]
gi|425784156|gb|EKV21949.1| RNA binding protein Rnp24, putative [Penicillium digitatum Pd1]
Length = 370
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNA 225
K ++V NL V++ + E F K G +++ V + + +D G C YA+VEFED+ A
Sbjct: 185 KRIFVGNLSFDVTKENLEENFGKCGTVTN--VHMATFQDTGKCKGYAWVEFEDLAAAEAA 242
Query: 226 VEVCILM 232
V +L+
Sbjct: 243 VRGFMLI 249
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ NL PSV+E ++ E F FG + +V S + YAF+ +++ NA+
Sbjct: 100 NIFIGNLDPSVTEMQLQETFSTFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAI 157
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|347965530|ref|XP_003435781.1| AGAP013048-PA [Anopheles gambiae str. PEST]
gi|333470469|gb|EGK97632.1| AGAP013048-PA [Anopheles gambiae str. PEST]
Length = 93
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
++ ++V NLP +VS E+ F K+G + S V+ + Y F+ F G NA
Sbjct: 15 VQKLFVGNLPWTVSTKELKTYFSKYGHVHSTNVIYDKSTGISRGYGFIVFSTREGFTNA 73
>gi|301767252|ref|XP_002919030.1| PREDICTED: putative RNA-binding protein 15B-like [Ailuropoda
melanoleuca]
Length = 761
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 197 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 255
Query: 216 FEDM 219
F+++
Sbjct: 256 FQNL 259
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFED 218
+VY++N+ +V+E E+ E FKK+G ++S V+ KD G + FV FED
Sbjct: 184 NVYIKNIDENVNEKELFEMFKKYGTITSCKVMF---KDDGSSRGFGFVAFED 232
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 182 ERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 241
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 242 PRGFGFITFEDEQSVDQAVNM 262
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 131 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 190
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 191 PRGFGFITFEDEQSVDQAVNM 211
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|403331270|gb|EJY64574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 565
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 158 ISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFE 217
I + + EE ++V LP +E +I ++G+L S +V + D +AF E+
Sbjct: 295 IISTKVEETPLKIFVGGLPKEFNEEQIKNLLLRYGQLKSFHLVKHTNIDQSRGFAFCEYT 354
Query: 218 DMTGVRNAVEVC 229
D GV+NA++
Sbjct: 355 DEKGVQNAIQFL 366
>gi|307173250|gb|EFN64303.1| Heterogeneous nuclear ribonucleoprotein Q [Camponotus floridanus]
Length = 683
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ +++ +YVRNL SE ++ E F+++G++ ++ KD
Sbjct: 320 WADPQEE----PDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIER----VKKIKD- 370
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 371 ---YAFIHFED 378
>gi|443733097|gb|ELU17586.1| hypothetical protein CAPTEDRAFT_178834 [Capitella teleta]
Length = 545
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Query: 150 SWADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
WAD EE DEE ++K +YVRNL V+E +I E+F+ FG++ ++ KD
Sbjct: 333 DWADPQEE----PDEETMSKVKVLYVRNLKQDVTEDQIREKFEVFGKVER----VKKIKD 384
Query: 207 VGICYAFVEFED 218
Y FV FE+
Sbjct: 385 ----YGFVHFEE 392
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++E+ +V+V+N+ ++E ++ F +FG ++S VV+R C+ FV FE++
Sbjct: 343 NKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSV-VVMRDGDGKSKCFGFVNFENVDDA 401
Query: 223 RNAVE 227
+VE
Sbjct: 402 AMSVE 406
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 295 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 354
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 355 PRGFGFITFEDEQSVDQAVNM 375
>gi|13435603|gb|AAH04679.1| Hnrpr protein, partial [Mus musculus]
Length = 601
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 294 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 344
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 345 YAFVHFEDRGAAVKAMD 361
>gi|74228775|dbj|BAE21877.1| unnamed protein product [Mus musculus]
Length = 604
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 297 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 347
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 348 YAFVHFEDRGAAVKAMD 364
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV- 228
+YV L PSV+E+ + + F G +SS V + + YA+V F D R A+E
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIEKL 101
Query: 229 ---------CILMW 233
C +MW
Sbjct: 102 NYTPIKGRPCRIMW 115
>gi|255945137|ref|XP_002563336.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588071|emb|CAP86142.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 369
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFEDMTGVRNA 225
K ++V NL V++ + E F K G +++ V + + +D G C YA+VEFED+ A
Sbjct: 185 KRIFVGNLSFDVTKENLEENFAKCGTVTN--VHMATFQDTGKCKGYAWVEFEDLAAAEAA 242
Query: 226 VEVCILM 232
V +L+
Sbjct: 243 VRGFMLV 249
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|420146859|ref|ZP_14654214.1| Cell surface protein, partial [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398399804|gb|EJN53421.1| Cell surface protein, partial [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 334
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 18 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESE----NILEDSPAEELNGSLQN 73
+ G ++ + + D + + DY PEQR VP + N+ P ++NG +
Sbjct: 66 LNGVVEHTKTKTKADASRRYSLADYVRPEQRTVTVPAQQKKQLNLKVTMPRSQMNGVIAG 125
Query: 74 AVNAA-QDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHV 132
+ Q+ + E G ++ YA I+ + Q+T +VTPQ + K + ++ +V
Sbjct: 126 GLRLQDQNATKQTAESSKGTTVQNQYAYIIGIVLHQNTKTVTPQMKLGKVAASQVNYRNV 185
Query: 133 PQPTTQQETVS 143
T + T +
Sbjct: 186 INTTLRNVTAT 196
>gi|395521675|ref|XP_003764941.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Sarcophilus
harrisii]
Length = 563
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|341892788|gb|EGT48723.1| CBN-RBD-1 protein [Caenorhabditis brenneri]
Length = 876
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 155 GEEISAVEDEEEI--------KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKD 206
G E+ + E EEE +++RNLP + E ++ FKK+GE+S VVI K
Sbjct: 258 GAELQSREKEEETVREKILETGRLFIRNLPYATKEDDLQFLFKKYGEVSEVQVVI--DKK 315
Query: 207 VGIC--YAFVEF 216
G C +A VEF
Sbjct: 316 TGNCKGFAIVEF 327
>gi|313225812|emb|CBY07286.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
KS++VR + +V E+ EF KFG + + + R +A++EFE M RN +
Sbjct: 4 KSLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNGL 62
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED+ + V
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDLRDAEDVV 123
>gi|241896855|ref|NP_780611.3| putative RNA-binding protein 15B [Mus musculus]
gi|229462811|sp|Q6PHZ5.2|RB15B_MOUSE RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=RNA-binding motif protein 15B
Length = 887
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 321 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 379
Query: 216 FEDM 219
F+++
Sbjct: 380 FQNL 383
>gi|126336349|ref|XP_001368088.1| PREDICTED: putative RNA-binding protein 15B-like [Monodelphis
domestica]
Length = 903
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 349 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 407
Query: 216 FEDM 219
F+++
Sbjct: 408 FQNL 411
>gi|126328455|ref|XP_001366091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Monodelphis
domestica]
Length = 633
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|412988249|emb|CCO17585.1| S-adenosyl-methyltransferase MraW [Bathycoccus prasinos]
Length = 685
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 149 KSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR 202
K + G+ + A E+E V+V+ LP +V ES+IA+ FK+ GEL E ++R
Sbjct: 226 KKQNNAGDRMVAQGSEQEGYEVFVKYLPKNVDESDIADFFKRCGELKEEVNLLR 279
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED+ + V
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDLRDAEDVV 101
>gi|320590573|gb|EFX03016.1| pre-mRNA splicing factor [Grosmannia clavigera kw1407]
Length = 1137
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 72 QNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNH 131
+ ++ AQ P ++P GEPQ T A+ +GQ +PS T + +++ D
Sbjct: 555 EEELSEAQAQTPT--QDP-GEPQ--TIAAAHDTVEGQDSPSSTKRKR-ETDVADDMDELA 608
Query: 132 VPQPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKF 191
+ ++Q + GE + ++ + E SVYV NLP V+ +++ + F+ +
Sbjct: 609 SKRARSEQHQPPPLPPPQQQQQRGE--TELKRDRENTSVYVANLPADVTSTKVRQYFRDY 666
Query: 192 GELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
G +++ + ++ + A VEF + V++A+
Sbjct: 667 GHVNN--IQLQREEKTKSMVALVEFRSVEDVQSAL 699
>gi|55728754|emb|CAH91116.1| hypothetical protein [Pongo abelii]
Length = 443
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTG 221
E + V+V LPP ++E EI F++FG L + K YAF+ F+D +
Sbjct: 182 ERYSRKVFVGGLPPDINEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 241
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 242 VQALIDACI 250
>gi|54607124|ref|NP_037418.3| putative RNA-binding protein 15B [Homo sapiens]
gi|114587106|ref|XP_516489.2| PREDICTED: putative RNA-binding protein 15B [Pan troglodytes]
gi|229463030|sp|Q8NDT2.3|RB15B_HUMAN RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=One-twenty two protein 3; Short=HuOTT3; AltName:
Full=RNA-binding motif protein 15B
gi|119585543|gb|EAW65139.1| RNA binding motif protein 15B [Homo sapiens]
gi|410220072|gb|JAA07255.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410260990|gb|JAA18461.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410288636|gb|JAA22918.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335595|gb|JAA36744.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335597|gb|JAA36745.1| RNA binding motif protein 15B [Pan troglodytes]
Length = 890
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 325 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 383
Query: 216 FEDM 219
F+++
Sbjct: 384 FQNL 387
>gi|443687690|gb|ELT90590.1| hypothetical protein CAPTEDRAFT_221687 [Capitella teleta]
Length = 115
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
+YV NLPP + +I + F KFG+++ I + G +AFVEFED
Sbjct: 12 IYVGNLPPDIRNRDIEDLFYKFGKIT----FIDLKNKRGPPFAFVEFED 56
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ + ++YV+N P SV+E+ + E F +GE++S +V K+ C F+ + D
Sbjct: 188 NDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSM-IVKTDNKNRKFC--FINYADSESA 244
Query: 223 RNAVE 227
+NA+E
Sbjct: 245 KNAME 249
>gi|189499100|ref|YP_001958570.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189494541|gb|ACE03089.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 90
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++Y+ NLP S+SE E+++ F +FG++ +++ + FVE + +NA++
Sbjct: 2 NIYIGNLPYSLSEEELSDAFAQFGQVDRANIIMDKETGRSKGFGFVEMPNDDEAQNAID 60
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|402859962|ref|XP_003894405.1| PREDICTED: putative RNA-binding protein 15B [Papio anubis]
Length = 890
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 325 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 383
Query: 216 FEDM 219
F+++
Sbjct: 384 FQNL 387
>gi|384491739|gb|EIE82935.1| hypothetical protein RO3G_07640 [Rhizopus delemar RA 99-880]
Length = 451
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 164 EEEIKS-----VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
E EI S +YVR LP S+++ E +++G +SS +I + Y F FED
Sbjct: 167 EAEINSYHTHNIYVRGLPSSITDESFLEMCQEYGTVSSSKAIIDQKTGECKGYGFAMFED 226
Query: 219 MTGVRNAVE 227
A+E
Sbjct: 227 EKNCEEAIE 235
>gi|109485382|ref|XP_001074007.1| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 860
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 145 YAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSR 204
Y+Y+ A E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R
Sbjct: 286 YSYQ---AVCEEDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPA 341
Query: 205 KDVGICYAFVEFEDM 219
+ G YAF++F+++
Sbjct: 342 RGQGGAYAFLKFQNL 356
>gi|388454468|ref|NP_001252598.1| putative RNA-binding protein 15B [Macaca mulatta]
gi|387540072|gb|AFJ70663.1| putative RNA-binding protein 15B [Macaca mulatta]
Length = 890
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 325 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 383
Query: 216 FEDM 219
F+++
Sbjct: 384 FQNL 387
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED +A+
Sbjct: 7 RTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRP---PGYAFVEFEDAQDAEDAIR 63
>gi|324500726|gb|ADY40332.1| RNA-binding protein 15B [Ascaris suum]
Length = 614
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 162 EDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTG 221
+D + ++++V NLP + E+E+ F+K+G + E V I++ + YAF+ F+ +
Sbjct: 251 DDSDATRTLFVGNLPADIRETELRRVFEKYGRV--EDVDIKTPPETNAAYAFILFQTLEQ 308
Query: 222 VRNA 225
NA
Sbjct: 309 SMNA 312
>gi|307212325|gb|EFN88129.1| Heterogeneous nuclear ribonucleoprotein Q [Harpegnathos saltator]
Length = 649
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 15/71 (21%)
Query: 151 WADTGEEISAVEDEE---EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
WAD EE DE+ +++ +YVRNL SE ++ E F+++G++ ++ KD
Sbjct: 314 WADPQEE----PDEQTMSKVRVLYVRNLTQDCSEEKLKESFEQYGKIER----VKKIKD- 364
Query: 208 GICYAFVEFED 218
YAF+ FED
Sbjct: 365 ---YAFIHFED 372
>gi|307206969|gb|EFN84808.1| Probable RNA-binding protein orb2 [Harpegnathos saltator]
Length = 344
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 18/85 (21%)
Query: 152 ADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGEL------SSEGVVIRSRK 205
++TGE S + V+V LPP + E EI F++FG L +E K
Sbjct: 79 SETGERFS--------RKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK 130
Query: 206 DVGICYAFVEFEDMTGVRNAVEVCI 230
YAF+ F+D V+ ++ CI
Sbjct: 131 G----YAFLLFQDEGSVQQLIDACI 151
>gi|156151394|ref|NP_001095868.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Homo sapiens]
gi|12655185|gb|AAH01449.1| HNRPR protein [Homo sapiens]
gi|123982706|gb|ABM83094.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|123997373|gb|ABM86288.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|383408163|gb|AFH27295.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Macaca
mulatta]
gi|384939484|gb|AFI33347.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Macaca
mulatta]
gi|410262102|gb|JAA19017.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410301028|gb|JAA29114.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410350927|gb|JAA42067.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
Length = 636
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 328 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 378
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 379 YAFVHFEDRGAAVKAMD 395
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ N+P + E+A F+ FG++ S V + + C+ F+ ++ +NA+
Sbjct: 340 NLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 397
>gi|397478941|ref|XP_003810792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1 [Pan
paniscus]
Length = 616
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 308 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 358
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 359 YAFVHFEDRGAAVKAMD 375
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED+ +A+
Sbjct: 108 RTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP---PGYAFVEFEDVQDAEDAIR 164
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC--YAFVEFED 218
+VY++N+ +V+E E+ E FKK+G ++S V+ KD G + FV FED
Sbjct: 498 NVYIKNIDENVNEKELFEMFKKYGTITSCKVMF---KDDGSSRGFGFVAFED 546
>gi|297282467|ref|XP_001111802.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform 1
[Macaca mulatta]
Length = 636
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 328 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 378
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 379 YAFVHFEDRGAAVKAMD 395
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + E E+ + F K+G + + I R YAFVEFED R+A E
Sbjct: 7 RTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRP---PGYAFVEFED---PRDAEE 60
Query: 228 VC 229
C
Sbjct: 61 AC 62
>gi|395832707|ref|XP_003789398.1| PREDICTED: putative RNA-binding protein 15B [Otolemur garnettii]
Length = 886
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 321 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 379
Query: 216 FEDM 219
F+++
Sbjct: 380 FQNL 383
>gi|351705983|gb|EHB08902.1| Heterogeneous nuclear ribonucleoprotein R [Heterocephalus glaber]
Length = 670
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 383 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 433
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 434 YAFVHFEDRGAAVKAMD 450
>gi|281338063|gb|EFB13647.1| hypothetical protein PANDA_007613 [Ailuropoda melanoleuca]
Length = 732
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 168 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 226
Query: 216 FEDM 219
F+++
Sbjct: 227 FQNL 230
>gi|74219109|dbj|BAE26696.1| unnamed protein product [Mus musculus]
Length = 610
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 303 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 353
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 354 YAFVHFEDRGAAVKAMD 370
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E + VYV NLP V + E+ + F K+G + I + G +AF+EFED +A
Sbjct: 6 EDQKVYVGNLPADVRDKEVEDIFHKYGRIK----YIDVKSGRGPAFAFIEFEDNRDAEDA 61
Query: 226 V 226
V
Sbjct: 62 V 62
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 159 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 218
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 219 PRGFGFITFEDEQSVDQAVNM 239
>gi|335307327|ref|XP_003127745.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Sus scrofa]
Length = 589
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|311268970|ref|XP_003132286.1| PREDICTED: putative RNA-binding protein 15B-like [Sus scrofa]
Length = 893
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 328 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 386
Query: 216 FEDM 219
F+++
Sbjct: 387 FQNL 390
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|359322208|ref|XP_003639807.1| PREDICTED: putative RNA-binding protein 15B-like [Canis lupus
familiaris]
Length = 898
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 334 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 392
Query: 216 FEDM 219
F+++
Sbjct: 393 FQNL 396
>gi|294657507|ref|XP_459815.2| DEHA2E11660p [Debaryomyces hansenii CBS767]
gi|199432746|emb|CAG88054.2| DEHA2E11660p [Debaryomyces hansenii CBS767]
Length = 331
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
++++V L P + + F +FG++ + VV + + +CY FVEFED
Sbjct: 244 RTLFVAKLNPITTSESLNIIFNRFGKVINCNVVADHKTNKSLCYGFVEFED 294
>gi|71659778|ref|XP_821609.1| poly(A)-binding protein [Trypanosoma cruzi strain CL Brener]
gi|459650|gb|AAC46487.1| poly(A) binding protein [Trypanosoma cruzi]
gi|515321|gb|AAC46489.1| poly(A) binding protein [Trypanosoma cruzi]
gi|2854066|gb|AAC02537.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|2854068|gb|AAC02538.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|70886993|gb|EAN99758.1| poly(A)-binding protein, putative [Trypanosoma cruzi]
gi|407408287|gb|EKF31789.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
gi|407847529|gb|EKG03215.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi]
Length = 550
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 164 EEEIK---SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG----ICYAFVEF 216
EE++K ++YV+NL PSV++ ++ E F FGE++S V +D+G + +A+V +
Sbjct: 177 EEQLKQFTNLYVKNLDPSVNDEKLKEVFSAFGEVTSAKV-----RDLGANQTVGFAYVAY 231
Query: 217 EDMTGVRNAVE 227
AVE
Sbjct: 232 ATHEAAAKAVE 242
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED ++A+
Sbjct: 7 RTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRP---PGYAFVEFEDAEDAQDAIR 63
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 93 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 152
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 153 PRGFGFITFEDEQSVDQAVNM 173
>gi|345306412|ref|XP_001505802.2| PREDICTED: cytoplasmic polyadenylation element-binding protein 2
[Ornithorhynchus anatinus]
Length = 484
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 159 SAVEDEEEI----KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYA 212
SA ++ E I + V+V LPP + E EI F++FG L + K YA
Sbjct: 214 SAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYA 273
Query: 213 FVEFEDMTGVRNAVEVCI 230
F+ F++ T V+ ++ CI
Sbjct: 274 FLLFQEETSVQALIDACI 291
>gi|47087069|ref|NP_998548.1| heterogeneous nuclear ribonucleoprotein L2 [Danio rerio]
gi|32451940|gb|AAH54655.1| Heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|182891832|gb|AAI65353.1| Hnrnpl protein [Danio rerio]
Length = 481
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
V+VR L V ES+I E ++FG +S ++ + R+ A VE+EDM G NAV
Sbjct: 44 VHVRGLVDGVLESDIVEALQEFGTISYVVLMPKKRQ------ALVEYEDMNGSCNAV 94
>gi|114145636|ref|NP_001041381.1| heterogeneous nuclear ribonucleoprotein Q [Rattus norvegicus]
gi|44888314|sp|Q7TP47.1|HNRPQ_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Liver regeneration-related
protein LRRG077; AltName: Full=Synaptotagmin-binding,
cytoplasmic RNA-interacting protein
gi|33086582|gb|AAP92603.1| Ab2-339 [Rattus norvegicus]
Length = 533
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 222 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 277
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 278 KKLKD----YAFIHFDERDGAVKAME 299
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 148 EKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV 207
E++ G + D + ++V +P + E+E+ E FKKFG ++ ++ + K
Sbjct: 176 ERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR 235
Query: 208 GICYAFVEFEDMTGVRNAVEV 228
+ F+ FED V AV +
Sbjct: 236 PRGFGFITFEDEQSVDQAVNM 256
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPQDAEDAV 71
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
++ + +VYV+NL S +E ++ F +FG ++S VV+R C+ FV FE+
Sbjct: 192 NKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSV-VVMRDGDGKSKCFGFVNFEN 246
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
++++ N+P + E+A F+ FG++ S V + + C+ F+ ++ +NA+
Sbjct: 331 NLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAI 388
>gi|431891280|gb|ELK02157.1| Heterogeneous nuclear ribonucleoprotein R [Pteropus alecto]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|426221978|ref|XP_004005182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Ovis aries]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|3694986|gb|AAC62511.1| RRM RNA binding protein GRY-RBP [Mus musculus]
Length = 625
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 315 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 370
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 371 KKLKD----YAFIHFDERDGAVKAME 392
>gi|390465455|ref|XP_002750457.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Callithrix jacchus]
gi|403287392|ref|XP_003934932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Saimiri boliviensis boliviensis]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 155 GEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFV 214
G + D + ++V +P + E+E+ E FKKFG ++ ++ + K + F+
Sbjct: 100 GWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFI 159
Query: 215 EFEDMTGVRNAVEV 228
FED V AV +
Sbjct: 160 TFEDEQSVDQAVNM 173
>gi|114145493|ref|NP_062640.2| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Mus musculus]
gi|44888326|sp|Q7TMK9.2|HNRPQ_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein Q;
Short=hnRNP Q; AltName: Full=Glycine- and tyrosine-rich
RNA-binding protein; Short=GRY-RBP; AltName:
Full=NS1-associated protein 1; AltName:
Full=Synaptotagmin-binding, cytoplasmic RNA-interacting
protein; AltName: Full=pp68
gi|148694587|gb|EDL26534.1| mCG16769, isoform CRA_a [Mus musculus]
gi|148694589|gb|EDL26536.1| mCG16769, isoform CRA_a [Mus musculus]
Length = 623
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 312 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 367
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 368 KKLKD----YAFIHFDERDGAVKAME 389
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S+YV L PSVSE+ + + F G +SS V + + YA+V F D + A+E
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 229 ----------CILMW 233
C +MW
Sbjct: 104 LNYTAIKGRPCRIMW 118
>gi|348532650|ref|XP_003453819.1| PREDICTED: hypothetical protein LOC100706680 [Oreochromis niloticus]
Length = 1145
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 131 HVPQPTTQQETVSSYAYEKSWADTGE-EISAVEDEEEIKSVYVRNLPPSVSESEIAEEFK 189
H+P P T + S + E I ++ +E + VYV + S++ E+ E F
Sbjct: 987 HIPVPVTISTNMPSSRESRKLRREHEIRIQKLKAIDERRVVYVGRIRRSMTHDELRERFS 1046
Query: 190 KFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+FGE+ + R R D YAFV F +M A++
Sbjct: 1047 QFGEVECVSLHFRDRGDH---YAFVTFYNMEDAFAAID 1081
>gi|264681490|ref|NP_001161134.1| cytoplasmic polyadenylation element-binding protein 3 [Danio rerio]
gi|124298403|gb|ABN04302.1| cytoplasmatic polyadenylation element binding protein 3 [Danio
rerio]
Length = 586
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDV--GICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F++ +
Sbjct: 325 ERYSRKVFVGGLPPDIDEDEITNSFRRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEESS 384
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 385 VQALIDACI 393
>gi|189053709|dbj|BAG35961.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|74207436|dbj|BAE30898.1| unnamed protein product [Mus musculus]
Length = 632
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|5031755|ref|NP_005817.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Homo sapiens]
gi|73950240|ref|XP_852945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Canis lupus familiaris]
gi|301754932|ref|XP_002913314.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Ailuropoda melanoleuca]
gi|332244972|ref|XP_003271637.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Nomascus leucogenys]
gi|332807931|ref|XP_513191.3| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 4 [Pan
troglodytes]
gi|397478943|ref|XP_003810793.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2 [Pan
paniscus]
gi|402853336|ref|XP_003891352.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Papio anubis]
gi|426328275|ref|XP_004024925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Gorilla gorilla gorilla]
gi|12230547|sp|O43390.1|HNRPR_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein R;
Short=hnRNP R
gi|2697103|gb|AAC39540.1| heterogeneous nuclear ribonucleoprotein R [Homo sapiens]
gi|119615448|gb|EAW95042.1| heterogeneous nuclear ribonucleoprotein R, isoform CRA_c [Homo
sapiens]
gi|168277942|dbj|BAG10949.1| heterogeneous nuclear ribonucleoprotein R [synthetic construct]
gi|281351549|gb|EFB27133.1| hypothetical protein PANDA_001090 [Ailuropoda melanoleuca]
gi|380784785|gb|AFE64268.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|383408165|gb|AFH27296.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|384939486|gb|AFI33348.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
gi|410224016|gb|JAA09227.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410262100|gb|JAA19016.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410301026|gb|JAA29113.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
gi|410350925|gb|JAA42066.1| heterogeneous nuclear ribonucleoprotein R [Pan troglodytes]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + ESEI + F K+G + + + R CY FVEF++ +A+
Sbjct: 114 RTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPP---CYCFVEFDNARDAEDAIR 170
>gi|354466428|ref|XP_003495676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Cricetulus griseus]
Length = 623
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 312 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 367
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 368 KKLKD----YAFIHFDERDGAVKAME 389
>gi|338722113|ref|XP_001501475.3| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Equus caballus]
gi|344287364|ref|XP_003415423.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Loxodonta
africana]
gi|348571199|ref|XP_003471383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Cavia
porcellus]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|326928394|ref|XP_003210365.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic polyadenylation
element-binding protein 4-like [Meleagris gallopavo]
Length = 743
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 164 EEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG--ICYAFVEFEDMTG 221
E + V+V LPP + E EI F++FG L + K YAF+ F+D +
Sbjct: 482 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 541
Query: 222 VRNAVEVCI 230
V+ ++ CI
Sbjct: 542 VQALIDACI 550
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGV 222
++ + ++YV+N P SV+E+ + + F FGE++S +V K+ C F+ + D
Sbjct: 188 NDTKFTNLYVKNFPDSVTEAHLKQLFSPFGEITSM-IVKTDNKNRKFC--FINYADSESA 244
Query: 223 RNAVE 227
+NA+E
Sbjct: 245 KNAME 249
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
VE E +Y+RNL V+E E+ + F K+G L V ++ G +AF++F++
Sbjct: 302 VEKIRETGRLYLRNLHFEVTEDELRQHFAKYGSLEEVHVPLKKSDGKGKGFAFIQFKE 359
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|15986735|gb|AAL11726.1|AF408434_1 RRM RNA binding protein NSAP1 [Mus musculus]
Length = 558
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 247 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 302
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 303 KKLKD----YAFIHFDERDGAVKAME 324
>gi|417403514|gb|JAA48557.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily [Desmodus rotundus]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|413921449|gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 465
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWA+ A ++K++YV+NLP +VS+ +I + F K GE++ V+ ++
Sbjct: 261 SWAEPKGSTDASSAAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKI-VLPPAKAGHKR 319
Query: 210 CYAFVEFEDMTGVRNAVE 227
+ FV F + + AV+
Sbjct: 320 DFGFVHFAERSSALKAVK 337
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 34/60 (56%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++++ +LP +++++ F FG + S V I + ++ C+ FV ++++ +NA+
Sbjct: 409 NLFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISA 468
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 134 QPTTQQETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGE 193
QPT +Q V++ E +TG +Y+RNL V+E EI ++F K G
Sbjct: 283 QPTEEQAVVAAPDEEDKIRETGR-------------LYLRNLHYEVTEDEIRQQFSKHGA 329
Query: 194 LSSEGVVIRSRKDVGICYAFVEF 216
L V ++ G +AFV+F
Sbjct: 330 LEEVHVPLQKADGKGKGFAFVQF 352
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
++VYV NLP + E E+ + F K+G ++ + + R YAFVEFED +A+
Sbjct: 7 RTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRP---PGYAFVEFEDAQDAEDAIR 63
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+YV NLPP + ++ + F +FG++S V +++R+ G + FVEFED +AV+
Sbjct: 11 IYVGNLPPDIRTKDVEDLFFRFGKVSF--VDLKNRR--GPPFVFVEFEDHRDASDAVKA 65
>gi|197102464|ref|NP_001126631.1| heterogeneous nuclear ribonucleoprotein R [Pongo abelii]
gi|55732180|emb|CAH92794.1| hypothetical protein [Pongo abelii]
Length = 633
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+++YV NLP + E EI + F K+G + + I R V YAFVEFED +A+
Sbjct: 7 RTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPV---YAFVEFEDPRDADDAI 62
>gi|417412066|gb|JAA52448.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily, partial [Desmodus rotundus]
Length = 638
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 327 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----V 382
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 383 KKLKD----YAFIHFDERDGAVKAME 404
>gi|390465453|ref|XP_002750458.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 2
[Callithrix jacchus]
Length = 532
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 224 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 274
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 275 YAFVHFEDRGAAVKAMD 291
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
S+YV L PSVSE+ + + F G +SS V + + YA+V F D + A+E
Sbjct: 43 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 102
Query: 229 ----------CILMW 233
C +MW
Sbjct: 103 LNYAPIKGVPCRIMW 117
>gi|348578330|ref|XP_003474936.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 3
[Cavia porcellus]
Length = 533
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 222 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----V 277
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 278 KKLKD----YAFIHFDERDGAVKAME 299
>gi|348518317|ref|XP_003446678.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Oreochromis niloticus]
Length = 594
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
++K ++VRNL V+E + + F +FG+L ++ KD YAF+ FE+ G A
Sbjct: 301 QVKVLFVRNLANGVTEELLEKSFSEFGKLER----VKKLKD----YAFIHFEERDGAVKA 352
Query: 226 VE 227
+E
Sbjct: 353 LE 354
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
VY+ NLPP + + ++ + F K+G ++ V + G +AF+EF+D R+A+
Sbjct: 49 VYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTR----GAPFAFIEFDDPRDARDAIR 102
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRR-XGPPFAFVEFEDPRDAEDAV 71
>gi|156151392|ref|NP_001095867.1| heterogeneous nuclear ribonucleoprotein R isoform 4 [Homo sapiens]
gi|73950226|ref|XP_535365.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Canis lupus familiaris]
gi|332244970|ref|XP_003271636.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Nomascus leucogenys]
gi|332807929|ref|XP_003307911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1 [Pan
troglodytes]
gi|402853334|ref|XP_003891351.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Papio anubis]
gi|426328273|ref|XP_004024924.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Gorilla gorilla gorilla]
gi|119615447|gb|EAW95041.1| heterogeneous nuclear ribonucleoprotein R, isoform CRA_b [Homo
sapiens]
gi|380784787|gb|AFE64269.1| heterogeneous nuclear ribonucleoprotein R isoform 2 [Macaca
mulatta]
Length = 532
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 224 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 274
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 275 YAFVHFEDRGAAVKAMD 291
>gi|383415175|gb|AFH30801.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|384944782|gb|AFI35996.1| heterogeneous nuclear ribonucleoprotein Q isoform 1 [Macaca
mulatta]
gi|410227736|gb|JAA11087.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410255524|gb|JAA15729.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
gi|410304910|gb|JAA31055.1| synaptotagmin binding, cytoplasmic RNA interacting protein [Pan
troglodytes]
Length = 624
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 312 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLER----V 367
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 368 KKLKD----YAFIHFDERDGAVKAME 389
>gi|381206512|ref|ZP_09913583.1| RNA-binding protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 85
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
++YV NL SVSE ++ F +FG++S V++ + + FVE +D +AVE
Sbjct: 2 NIYVGNLAFSVSEDQLRSAFSQFGKVSKASVIMDRVNNRSKGFGFVEMDDAAEGNSAVEA 61
Query: 229 C 229
Sbjct: 62 L 62
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 163 DEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 218
++ + +VYV+NL S +E ++ F +FG ++S VV+R C+ FV FE+
Sbjct: 192 NKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSV-VVMRDGDGKSKCFGFVNFEN 246
>gi|33859724|ref|NP_083147.1| heterogeneous nuclear ribonucleoprotein R [Mus musculus]
gi|17066599|gb|AAL35332.1|AF441128_1 heterogeneous nuclear ribonucleoprotein R [Mus musculus]
gi|23273731|gb|AAH38051.1| Heterogeneous nuclear ribonucleoprotein R [Mus musculus]
Length = 632
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|330864798|ref|NP_001193510.1| putative RNA-binding protein 15B [Bos taurus]
gi|296474899|tpg|DAA17014.1| TPA: RNA binding motif protein 15B [Bos taurus]
Length = 894
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 156 EEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVE 215
E++ +D+ +++++ NL SVSE E+ F+K+G + E V+ R + G YAF++
Sbjct: 329 EDLMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYG-IIEEVVIKRPARGQGGAYAFLK 387
Query: 216 FEDM 219
F+++
Sbjct: 388 FQNL 391
>gi|62990189|ref|NP_783193.2| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
gi|62471548|gb|AAH93598.1| Heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
Length = 632
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|395821027|ref|XP_003783851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform 1
[Otolemur garnettii]
Length = 633
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|354483012|ref|XP_003503689.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Cricetulus griseus]
gi|344256125|gb|EGW12229.1| Heterogeneous nuclear ribonucleoprotein R [Cricetulus griseus]
Length = 633
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|328856954|gb|EGG06073.1| hypothetical protein MELLADRAFT_48578 [Melampsora larici-populina
98AG31]
Length = 300
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 93 PQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQETVSSYAYEKSWA 152
P K T +L G P P PSV++ + P +Q+
Sbjct: 148 PYKETLGGVLGGDAGDQEPQDGPPPSVAQGTGAGAGPTGKYVPPSQRMDGGKRG------ 201
Query: 153 DTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-- 210
G + + +++ ++ V NL V E+++ + F +FG++S + + ++ G+C
Sbjct: 202 --GGDSMQKPNRDDLPTLRVTNLSEDVQENDLWDLFARFGKISR--IYVGKDQETGLCKG 257
Query: 211 YAFVEFED 218
+AFV FED
Sbjct: 258 FAFVSFED 265
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 228
+V++ +LP ++E+A+ F FG + S V I + C+ FV F++ + A++
Sbjct: 374 NVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQA 433
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 168 KSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 227
+++YV NLP + ESEI + F K+G + + + R CY FVEF++ +A+
Sbjct: 7 RTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPP---CYCFVEFDNARDAEDAIR 63
>gi|129277529|ref|NP_001076077.1| heterogeneous nuclear ribonucleoprotein R [Bos taurus]
gi|126717461|gb|AAI33300.1| HNRNPR protein [Bos taurus]
gi|296489987|tpg|DAA32100.1| TPA: heterogeneous nuclear ribonucleoprotein R [Bos taurus]
gi|440897846|gb|ELR49456.1| Heterogeneous nuclear ribonucleoprotein R [Bos grunniens mutus]
Length = 633
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI--RSRKDVGICY-AFVEFE 217
+E E ++VRNLP + +E E+AE F++FG+LS+ +++ +++ G+ Y F E
Sbjct: 355 MEALSETGRIFVRNLPYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLAYVTFAIPE 414
Query: 218 DMTGVRNAVEVCIL 231
D AV+ I
Sbjct: 415 DGVKAMEAVDGSIF 428
>gi|410076202|ref|XP_003955683.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
gi|372462266|emb|CCF56548.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
Length = 582
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 169 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE- 227
S+YV +L PSVSE+ + + F G ++S V + + YA+V F D + A+E
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVTSIRVCRDAITKTSLGYAYVNFADHEAGKVAIER 100
Query: 228 ---------VCILMW 233
+C +MW
Sbjct: 101 LNYTPIKGRLCRIMW 115
>gi|345320008|ref|XP_001511604.2| PREDICTED: heterogeneous nuclear ribonucleoprotein R
[Ornithorhynchus anatinus]
Length = 479
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|156151396|ref|NP_001095869.1| heterogeneous nuclear ribonucleoprotein R isoform 3 [Homo sapiens]
gi|297282469|ref|XP_002802270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform 2
[Macaca mulatta]
gi|380784783|gb|AFE64267.1| heterogeneous nuclear ribonucleoprotein R isoform 1 [Macaca
mulatta]
Length = 535
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 227 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 277
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 278 YAFVHFEDRGAAVKAMD 294
>gi|127799069|gb|AAH50079.2| Synaptotagmin binding, cytoplasmic RNA interacting protein [Mus
musculus]
Length = 562
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 312 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 367
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 368 KKLKD----YAFIHFDERDGAVKAME 389
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 166 EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNA 225
E ++YV+NLP V E + + F +FG++ S V+R C+ FV FE + A
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK-VMRDNSGHSRCFGFVNFEKHEEAQKA 247
Query: 226 V 226
V
Sbjct: 248 V 248
>gi|456753306|gb|JAA74142.1| heterogeneous nuclear ribonucleoprotein R tv2 [Sus scrofa]
Length = 633
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|33416526|gb|AAH55863.1| Syncrip protein, partial [Mus musculus]
Length = 667
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 149 KSWADTG--EEISAVEDEE-----EIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVI 201
K W + G E +ED + ++K ++VRNL +V+E + + F +FG+L +
Sbjct: 356 KVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER----V 411
Query: 202 RSRKDVGICYAFVEFEDMTGVRNAVE 227
+ KD YAF+ F++ G A+E
Sbjct: 412 KKLKD----YAFIHFDERDGAVKAME 433
>gi|212275376|ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
gi|194689494|gb|ACF78831.1| unknown [Zea mays]
gi|219887513|gb|ACL54131.1| unknown [Zea mays]
gi|238010456|gb|ACR36263.1| unknown [Zea mays]
gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 467
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 150 SWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGI 209
SWA+ A ++K++YV+NLP +VS+ +I + F K GE++ V+ ++
Sbjct: 263 SWAEPKGSTDASSAAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKI-VLPPAKAGHKR 321
Query: 210 CYAFVEFEDMTGVRNAVE 227
+ FV F + + AV+
Sbjct: 322 DFGFVHFAERSSALKAVK 339
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 170 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAV 71
>gi|27903509|gb|AAO24773.1| heterogeneous nuclear ribonucleoprotein R [Rattus norvegicus]
Length = 632
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|74194838|dbj|BAE26010.1| unnamed protein product [Mus musculus]
Length = 632
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 151 WADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC 210
WAD EE E ++K ++VRNL +V+E + + F +FG+L ++ KD
Sbjct: 325 WADPVEEPDP-EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLER----VKKLKD---- 375
Query: 211 YAFVEFEDMTGVRNAVE 227
YAFV FED A++
Sbjct: 376 YAFVHFEDRGAAVKAMD 392
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 167 IKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 226
+ ++YV NL +E E+ F+++GE+S+ +++ +AFVE D G ++A+
Sbjct: 65 VTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAI 124
Query: 227 E 227
E
Sbjct: 125 E 125
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 161 VEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMT 220
E EEE K+++V L +V + ++A EF + GE+ S V I + VEF D +
Sbjct: 336 AEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADAS 395
Query: 221 GVRNAVEV 228
V+ A++
Sbjct: 396 SVQKAIDT 403
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,870,749,001
Number of Sequences: 23463169
Number of extensions: 168882857
Number of successful extensions: 486939
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 2299
Number of HSP's that attempted gapping in prelim test: 483455
Number of HSP's gapped (non-prelim): 4916
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 74 (33.1 bits)