BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026742
(234 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWL 142
+ +YDGHGGP AA F + H+ I + + ++T AFLE ++ F S R
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHAR--LS 207
Query: 143 NKPQIASAGSCCLVGIICSGL-LYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEF 201
+ ++G+ V ++ G+ L +A+ GDSR +L R + K ++L+ +H +
Sbjct: 208 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR------KGKPMKLTIDHTPERKD 261
Query: 202 VREELR 207
+E ++
Sbjct: 262 EKERIK 267
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWL 142
+ +YDGHGGP AA F + H+ I + + ++T AFLE ++ F S R
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHAR--LS 93
Query: 143 NKPQIASAGSCCLVGIICSGL-LYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEF 201
+ ++G+ V ++ G+ L +A+ GDSR +L R + K ++L+ +H +
Sbjct: 94 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR------KGKPMKLTIDHTPERKD 147
Query: 202 VREELR 207
+E ++
Sbjct: 148 EKERIK 153
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLF----DNIKKFTSESCGISA---------DVITRAFLET 129
F G+YDGHGG + A + D L + I++ E C + V T FL
Sbjct: 70 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 129
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 130 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 187
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 188 ----EAMPLSVDHKPDRE 201
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLF----DNIKKFTSESCGISA---------DVITRAFLET 129
F G+YDGHGG + A + D L + I++ E C + V T FL
Sbjct: 68 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 127
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 128 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 185
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 186 ----EAMPLSVDHKPDRE 199
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLF----DNIKKFTSESCGISA---------DVITRAFLET 129
F G+YDGHGG + A + D L + I++ E C + V T FL
Sbjct: 77 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 136
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 137 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 194
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 195 ----EAMPLSVDHKPDRE 208
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLF----DNIKKFTSESCGISA---------DVITRAFLET 129
F G+YDGHGG + A + D L + I++ E C + V T FL
Sbjct: 64 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 123
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 124 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 181
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 182 ----EAMPLSVDHKPDRE 195
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLF----DNIKKFTSESCGISA---------DVITRAFLET 129
F G+YDGHGG + A + D L + I++ E C + V T FL
Sbjct: 53 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTV 112
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 113 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 170
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 171 ----EAMPLSVDHKPDRE 184
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNI------------KKFTSESCGISAD-VITRAFLET 129
F G+YDGHGG + A + D L + K+ T E + D V T FL
Sbjct: 67 FFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTV 126
Query: 130 EEEFLSLV-------RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMEND 182
+ E + ++ L + GS +V ++CS + ++N GDSR VL R +
Sbjct: 127 DGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-- 184
Query: 183 VKEVKAVQLSSEHNASME 200
+A+ LS +H E
Sbjct: 185 ----EAMPLSVDHKPDRE 198
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 82 TFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQW 141
+F +YDGHGG E A++ + HL +K + + AFL + L +
Sbjct: 52 SFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEE 111
Query: 142 LNKPQIASAGS----------CCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQL 191
L SAGS +V ++ LY+ANAGDSR V+ R KA+++
Sbjct: 112 LKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCR------NGKALEM 165
Query: 192 SSEHNA--SMEFVREE 205
S +H ++E+ R E
Sbjct: 166 SFDHKPEDTVEYQRIE 181
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISAD----------VITRAFLETEEE 132
F G+YDGHGG + A + + + + + ++ + +D + +FL + E
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 133 FLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLS 192
S+ P+ + GS +V ++ +++AN GDSR VL R + A+ LS
Sbjct: 114 IESVA-------PE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT------ALPLS 158
Query: 193 SEHNASME 200
+H E
Sbjct: 159 VDHKPDRE 166
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 146 QIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE 205
++A +G+ V + L++AN GDSR +LG E D AV LS++HNA E E
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEED-GSWSAVTLSNDHNAQNEREVER 253
Query: 206 LRALHPDDPQIVVLKHKVWRVKGII 230
L+ HP + V+K R+ G++
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLL 276
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 25/128 (19%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISAD----------VITRAFLETEEE 132
F G+YDGHGG + A + + + + + ++ + D + +FL + E
Sbjct: 57 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 133 FLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLS 192
S+ P+ + GS +V ++ +++AN GDSR VL R + A+ LS
Sbjct: 117 IESVA-------PE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT------ALPLS 161
Query: 193 SEHNASME 200
+H E
Sbjct: 162 VDHKPDRE 169
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 25/128 (19%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISAD----------VITRAFLETEEE 132
F G+YDGHGG + A + + + + + ++ + D + +FL + E
Sbjct: 69 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 133 FLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLS 192
S+ P+ + GS +V ++ +++AN GDSR VL R + A+ LS
Sbjct: 129 IESVA-------PE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT------ALPLS 173
Query: 193 SEHNASME 200
+H E
Sbjct: 174 VDHKPDRE 181
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 146 QIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE 205
++A +G+ V + L++AN GDSR +LG E D AV LS++HNA E +
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEED-GSWSAVTLSNDHNAQNERELQR 253
Query: 206 LRALHPDDPQIVVLKHKVWRVKGII 230
L+ HP + V+K R+ G++
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLL 276
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 83 FVGIYDGHGGPEAARFVNDH----LFDNIKKFTSESCGISA------DVITRAFLETEEE 132
F G+YDGHGG + A + + L + I K E C + +F+ + E
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 133 FLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR 178
++ + P+ + GS +V ++ +++AN GDSR VL R
Sbjct: 121 IETVA-----HAPE--TVGSTSVVAVVFPTHIFVANCGDSRAVLCR 159
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 82 TFVGIYDGHGGPEAARFVNDHLFDNI---KKFTSESCGISADV----ITRAFLETEEEFL 134
+F +YDGH G + A++ +HL D+I + F + S + I FLE +E
Sbjct: 54 SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEH-- 111
Query: 135 SLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR 178
+R K +GS + +I Y N GDSR +L R
Sbjct: 112 --MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 82 TFVGIYDGHGGPEAARFVNDHLFDNI---KKFTSESCGISADV----ITRAFLETEEEFL 134
+F +YDGH G + A++ +HL D+I + F + S + I FLE +E
Sbjct: 54 SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEH-- 111
Query: 135 SLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR 178
+R K +GS + +I Y N GDSR +L R
Sbjct: 112 --MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 82 TFVGIYDGHGGPEAARFVNDHLFDNI---KKFTSESCGISA---------DVITRAFLET 129
+F +YDGH G A + + HL ++I + F + SA + I FL+
Sbjct: 56 SFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKI 115
Query: 130 EEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR 178
+E +RN + + +GS + +I +Y N GDSR VL R
Sbjct: 116 DE----YMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR 160
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 83 FVGIYDGHGGPEAARFVNDHLFDNI--KKFTSESCGISA--------DVITRAFLET--- 129
G+++G+ G FV L + + +E DV+ R+FLE+
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 130 ---EEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEV 186
E+ L L R + L + S G+ +V ++ + LY+AN G +R +L ++ V +
Sbjct: 126 ALAEKASLQLERLKTLERE--ISGGAMAVVAVLLNNKLYVANVGTNRALL--CKSTVDGL 181
Query: 187 KAVQLSSEHNASME 200
+ QL+ +H E
Sbjct: 182 QVTQLNVDHTTENE 195
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 149 SAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME 200
S G+ +V ++ + LY+AN G +R +L + + V ++ QL+ +H E
Sbjct: 163 SGGAMAVVAVLLNNKLYVANVGTNRALLCK--STVDGLQVTQLNVDHTTENE 212
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 149 SAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME 200
S G+ +V ++ + LY+AN G +R +L ++ V ++ QL+ +H E
Sbjct: 165 SGGAMAVVAVLLNNKLYVANVGTNRALL--CKSTVDGLQVTQLNVDHTTENE 214
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 149 SAGSCCLVGIICSGLLYIANAGDSRVVLGRM-ENDVKEVKAVQLSSEHN 196
S GS ++ +I LY+ N G+ R +L + E+D V QLS +HN
Sbjct: 152 SVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTV--TQLSVDHN 198
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,594,763
Number of Sequences: 62578
Number of extensions: 233554
Number of successful extensions: 522
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 27
length of query: 234
length of database: 14,973,337
effective HSP length: 96
effective length of query: 138
effective length of database: 8,965,849
effective search space: 1237287162
effective search space used: 1237287162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)