BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026745
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82314|U082_ARATH Probable transcriptional regulatory protein At2g25830
OS=Arabidopsis thaliana GN=At2g25830 PE=2 SV=2
Length = 331
Score = 337 bits (865), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/214 (81%), Positives = 194/214 (90%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
VKKGGPNP SNT LA +L+KAKELDVPKDIVERNIKRASEKGQEAFIEK+YEVYGYGGVS
Sbjct: 117 VKKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVS 176
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
+VVEVLTDKI RSVAA+R VVKD GGKMAD GSVMFKF+R RVVNIK T+ADKDQLL IA
Sbjct: 177 MVVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIA 236
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLP 199
LDAGAEDVIEPP EDDTDEDR ERYYK+V++++NY+ I +KLR+ G+ FE DNGSELLP
Sbjct: 237 LDAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLP 296
Query: 200 ITTIEVDDEAMELNKELIAKLLELDDVDAVYTDQ 233
+TT+EVDDEAMELNKEL+ KLLELDDVDAVY DQ
Sbjct: 297 LTTVEVDDEAMELNKELMQKLLELDDVDAVYIDQ 330
>sp|Q9PJT5|Y742_CHLMU Probable transcriptional regulatory protein TC_0742 OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=TC_0742 PE=3 SV=1
Length = 238
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P SN L +++KAK+ ++P + +ERN+K+AS Q+ + E YE+Y
Sbjct: 30 KELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNYEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYNFSRKGACYVPKSSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D G ED+ D DE+ ++ V+ + + L G+ ++
Sbjct: 150 SLLTHVIDCGGEDL-------DSEDEE----FFLVLCEPTDLASVKEALLAKGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D+EA + N LI L +DDVD VY +
Sbjct: 198 KMIYVPLRLVDCDEEAGKSNLALIEWLENIDDVDDVYHN 236
>sp|Q253C8|Y838_CHLFF Probable transcriptional regulatory protein CF0838 OS=Chlamydophila
felis (strain Fe/C-56) GN=CF0838 PE=3 SV=1
Length = 238
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P +N L +++KAK+ ++P + +ERN+K+AS Q+ F + YE+Y
Sbjct: 30 KELISAVKMGGPDPKTNARLRVIIQKAKDQNIPSENIERNLKKASSADQKNFEDVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
GYGGV I+VE +TD R+ + +R V GG + +PGSV++ F R + D+
Sbjct: 90 GYGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYNFSRKGACYVPKNSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL ++ GAED+ D+ DE+ ++ V+ + + + +L G+ T+
Sbjct: 150 ALLSHVIEVGAEDL-------DNDDEE----HFVVLCDPVDLSSVKEQLVALGVTC-TEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D++ E N LI L ++DDVD VY +
Sbjct: 198 KLIYVPLRVVDCDEKDGEANLALIEWLEKIDDVDEVYHN 236
>sp|Q9Z7Y0|Y573_CHLPN Probable transcriptional regulatory protein
CPn_0573/CP_0176/CPj0573/CpB0595 OS=Chlamydia pneumoniae
GN=CPn_0573 PE=3 SV=1
Length = 238
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GG +P SN L V++KAKE ++P + +ERN+K+A+ Q+ F E YE+Y
Sbjct: 30 KELISAVKLGGADPKSNARLRMVIQKAKENNIPNENIERNLKKATSAEQKNFEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R + GG + +PGSV++ F R + + D++
Sbjct: 90 GHGGVGIIVEAMTDNKNRTASDMRIAINKRGGSLVEPGSVLYNFARKGACTVAKSSIDEE 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
+ A++AGAED+ DT++ E + V+ + KL G D
Sbjct: 150 VIFSYAIEAGAEDL--------DTED---EENFLVICAPSELASVKEKLISQGATCSEDR 198
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
LP+ ++ D++ E N LI L +++DVD VY +
Sbjct: 199 LI-YLPLRLVDCDEKDGEANLALIDWLEQIEDVDDVYHN 236
>sp|B0B830|Y717_CHLT2 Probable transcriptional regulatory protein CTL0717 OS=Chlamydia
trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)
GN=CTL0717 PE=3 SV=1
Length = 238
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P SN L +++KAK+ ++P + +ERN+K+AS Q+ + E YE+Y
Sbjct: 30 KELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNYEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYNFSRKGACYVPKHSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D G ED+ D+D+ E ++ V+ + + L G+ ++
Sbjct: 150 SLLTHVIDCGGEDL--------DSDD---EEFFLVLCEPTDLASVKEALLAKGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D+E + N LI L +DDVD VY +
Sbjct: 198 RLIYVPLRLVDCDEETGKSNLALIEWLENIDDVDDVYHN 236
>sp|B0BC95|Y713_CHLTB Probable transcriptional regulatory protein CTLon_0713 OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis)
GN=CTLon_0713 PE=3 SV=1
Length = 238
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P SN L +++KAK+ ++P + +ERN+K+AS Q+ + E YE+Y
Sbjct: 30 KELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNYEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYNFSRKGACYVPKHSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D G ED+ D+D+ E ++ V+ + + L G+ ++
Sbjct: 150 SLLTHVIDCGGEDL--------DSDD---EEFFLVLCEPTDLASVKEALLAKGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D+E + N LI L +DDVD VY +
Sbjct: 198 RLIYVPLRLVDCDEETGKSNLALIEWLENIDDVDDVYHN 236
>sp|Q3KLP1|Y499_CHLTA Probable transcriptional regulatory protein CTA_0499 OS=Chlamydia
trachomatis serovar A (strain HAR-13 / ATCC VR-571B)
GN=CTA_0499 PE=3 SV=1
Length = 238
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P SN L +++KAK+ ++P + +ERN+K+AS Q+ + E YE+Y
Sbjct: 30 KELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNYEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYNFSRKGACYVPKHSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D G ED+ D+D+ E ++ V+ + + L G+ ++
Sbjct: 150 SLLTHVIDCGGEDL--------DSDD---EEFFLVLCEPTDLASVKEALLAKGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D+E + N LI L +DDVD VY +
Sbjct: 198 RLIYVPLRLVDCDEETGKSNLALIEWLENIDDVDDVYHN 236
>sp|Q824H7|Y169_CHLCV Probable transcriptional regulatory protein CCA_00169
OS=Chlamydophila caviae (strain GPIC) GN=CCA_00169 PE=3
SV=1
Length = 238
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P +N L V++KAK+ ++P + +ERN+K+A+ Q+ F + YE+Y
Sbjct: 30 KELMAAVKMGGPDPKTNARLRVVIQKAKDQNIPNENIERNLKKATSADQKNFEDVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R I + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYNFARKGACYISKSSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D GAED+ D+ DE+ + V+ + KL G+ ++
Sbjct: 150 TLLSHVIDVGAEDL-------DNDDEEN----FIVLCDPVELASVKEKLVALGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D++ E N LI L ++DDVD VY +
Sbjct: 198 KLIYVPLRLVDCDEKDGEANLALIEWLEQIDDVDEVYHN 236
>sp|O84463|Y457_CHLTR Probable transcriptional regulatory protein CT_457 OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=CT_457 PE=3 SV=1
Length = 238
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P SN L +++KAK+ ++P + +ERN+K+AS Q+ + E YE+Y
Sbjct: 30 KELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNYEEVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + D+
Sbjct: 90 GFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYNFSRKGACYVPKHSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D G ED+ D+D+ E ++ V+ + + L G+ ++
Sbjct: 150 SLLTHMIDCGGEDL--------DSDD---EEFFLVLCEPTDLASVKEALLAKGVTC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D+E + N LI L ++DVD VY +
Sbjct: 198 RLIYVPLRLVDCDEETGKSNLALIEWLENINDVDDVYHN 236
>sp|Q5L6U7|Y166_CHLAB Probable transcriptional regulatory protein CAB166 OS=Chlamydophila
abortus (strain S26/3) GN=CAB166 PE=3 SV=1
Length = 238
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 119/219 (54%), Gaps = 12/219 (5%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GGP+P +N L +++KAK+ ++P + +ERN+K+A+ Q+ F YE+Y
Sbjct: 30 KELMAAVKMGGPDPKTNARLRMIIQKAKDQNIPNENIERNLKKATSADQKNFENVTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV I+VE +TD R+ + +R V GG + +PGSV++ F R + + D+
Sbjct: 90 GHGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYNFVRKGACYVPKSSIDEA 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
LL +D GAED+ D D+D ++ V+ + KL G+ ++
Sbjct: 150 VLLPHVIDVGAEDL--------DNDDD---EHFLVLCDPVELASVKEKLTALGVAC-SEE 197
Query: 194 GSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P+ ++ D++ E N LI L ++DDVD VY +
Sbjct: 198 KLIYVPLRLVDCDEQDGEANLALIEWLEKIDDVDEVYHN 236
>sp|A9WSE7|Y2002_RENSM Probable transcriptional regulatory protein RSal33209_2002
OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM
20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
GN=RSal33209_2002 PE=3 SV=1
Length = 251
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 22/240 (9%)
Query: 2 QRKQSCIRGWGRKSYLRNVKK-------GGPNPTSNTVLAAVLEKAKELDVPKDIVERNI 54
+ K++ I G KS+ + +K GGP+ N L + KAK+ VP D ++R I
Sbjct: 11 KHKKAVIDGRRAKSFAKLIKNIEVAARVGGPDMAGNPALELAVTKAKKTSVPNDNIDRAI 70
Query: 55 KRASEKGQEA--FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 112
KR S + EA + +YE YG G +I++E LTD R+ + VR V GG MADPGS
Sbjct: 71 KRGSGQLGEAIDYQTIMYEGYGPQGTAILIECLTDNKNRAASEVRLAVSRNGGNMADPGS 130
Query: 113 VMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTS 172
V + F R +V++ + +D LL LDAGAE+V N ++V+S
Sbjct: 131 VSYLFARKGIVSLPQNELSEDDLLMAVLDAGAEEVKSEGEN------------FEVISEP 178
Query: 173 DNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+ I + L EAGI ++TD+ +P +E+D E + L L +LDDV VY++
Sbjct: 179 QDLPAIRSALTEAGIEYDTDDAG-FVPSMQVELDVENAKKFMRLYDALEDLDDVQNVYSN 237
>sp|A0LUK8|Y1346_ACIC1 Probable transcriptional regulatory protein Acel_1346
OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
GN=Acel_1346 PE=3 SV=1
Length = 248
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 15/212 (7%)
Query: 23 GGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGGVSI 80
GGP+P N LA + KA++ VP D +ER I+R + E G + +YE YG GGV++
Sbjct: 39 GGPDPNGNPTLADAIAKARDQSVPNDNIERAIRRGAGLEAGGTDWEPIIYEGYGPGGVAL 98
Query: 81 VVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIAL 140
++E LTD R+ + VR + GG MADPGSV + F R +V + +D +L L
Sbjct: 99 LIECLTDNRNRAASEVRTTMTRNGGSMADPGSVAYLFNRKGIVIVPKEGRSEDDVLAAVL 158
Query: 141 DAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPI 200
DAGAE+V +D E ++VVS + T + L AGI +E+ + P
Sbjct: 159 DAGAEEV-------NDLGES-----FEVVSEPGDLTRVRDALSAAGIRYESAD-VAWQPT 205
Query: 201 TTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+ +DD+ LI L + DDV AV+ +
Sbjct: 206 VNVPLDDDTARKVLRLIEALEDCDDVQAVWAN 237
>sp|A1T879|Y2570_MYCVP Probable transcriptional regulatory protein Mvan_2570
OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
GN=Mvan_2570 PE=3 SV=1
Length = 251
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 112/215 (52%), Gaps = 15/215 (6%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGG 77
+ GG +P N L ++KAK+ VP D +ER KR S E G + YE YG G
Sbjct: 36 ARTGGGDPAGNPTLFDAIQKAKKSSVPNDNIERARKRGSGEEAGGADWQTITYEGYGPNG 95
Query: 78 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLD 137
V+++VE LTD R+ VR + GG MADPGSV + F R V+ ++ D +D +L
Sbjct: 96 VAVLVECLTDNRNRAAGEVRVAMTRNGGNMADPGSVAYLFTRKGVITLEKNDLTEDDVLA 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
LDAGAEDV D D ++++S + + T L++AGI +E+ S
Sbjct: 156 AVLDAGAEDV------NDLGDS------FEIISEPTDLVAVRTALQDAGIDYESAEAS-F 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T+ VD EA +L+ L + DDV VYT+
Sbjct: 203 QPSVTVPVDLEAARKVLKLVDALEDSDDVQDVYTN 237
>sp|Q67QQ4|Y1004_SYMTH Probable transcriptional regulatory protein STH1004
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=STH1004 PE=3 SV=1
Length = 242
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 16/222 (7%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR-ASEKGQEAFIEKVYEV 72
K ++ ++GGP+P +N +L + A++ ++P + ++R I R A E F E VYE
Sbjct: 28 KDIMKAAREGGPDPETNFLLKVAVAAARKANMPNENIQRAIARGAGLDSAERFDEIVYEG 87
Query: 73 YGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKF--TDA 130
YG GGV+I++ ++TD R+ A VR + GG + + G V + F++ V+ I T
Sbjct: 88 YGPGGVAIMMNIVTDNRNRTAADVRHIFSKHGGSLGETGCVSWMFKKRGVIEIDRGETPI 147
Query: 131 DKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFE 190
+D L+ IALDAGAED++ T+ED Y + + D + +L AG+P E
Sbjct: 148 GEDDLMMIALDAGAEDLV--------TEEDS----YAIYTAPDALNQVMKQLEAAGVPVE 195
Query: 191 TDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+ ++P TT+ V E E L+ L E DDV VYT+
Sbjct: 196 KGEVA-MVPTTTVAVSGEEAEQLMRLLDLLEEHDDVQNVYTN 236
>sp|B3WD20|Y1186_LACCB Probable transcriptional regulatory protein LCABL_11860
OS=Lactobacillus casei (strain BL23) GN=LCABL_11860 PE=3
SV=1
Length = 243
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 15/214 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K+GGP+P+ N L V++KAK ++PKD ++R + +AS++ + E YE YG GGV+
Sbjct: 36 AKQGGPDPSGNPSLRLVMDKAKAANMPKDNIKRALDKASDRDAANYDEVTYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRAR--VVNIKFTDADKDQLLD 137
I+VE LTD R+ + VR + GG MA G+V + F R V++ D D+DQ+L+
Sbjct: 96 ILVEALTDNRNRTSSTVRVAITRHGGNMAAAGAVSYMFDRKGYLVISRDDLDVDEDQMLE 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
AL+AGAED+ ++ +++ + + + L E G F N +
Sbjct: 156 DALEAGAEDM------------QTSDEAFEIYTDPKEFAQVRDALEEKGYKF-VQNELTM 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
+P + ++ +E + +I +L + DDV VYT
Sbjct: 203 VPQNLTPIPEDKVEQFQAMIDQLEDDDDVQEVYT 236
>sp|P62036|Y1074_GEOSL Probable transcriptional regulatory protein GSU1074 OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU1074 PE=3 SV=1
Length = 247
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 15/214 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEVYGYGGV 78
K GG +P N L A ++KAK ++PKD +ER IK+ + E ++ E +YE YG GGV
Sbjct: 36 AKIGGGDPNGNPRLRAAVDKAKAENMPKDNIERAIKKGTGELEGVSYEEIIYEGYGPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
+++VE +TD R+V VR C G M + G V + F + ++ + D D ++L +
Sbjct: 96 AVLVECMTDNRNRTVGEVRSTFTKCNGNMGEAGCVSWMFDKKGLIVLS-KDVDFEKLFET 154
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
AL+AGA+DV DE E Y+V++ + D+ L +AG PFE+ + ++
Sbjct: 155 ALEAGADDV---------ADE---EEQYEVLTDPAAFIDVREALEKAGFPFESAEIT-MI 201
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T +++D + E +L+ +L + DDV VY +
Sbjct: 202 PQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYAN 235
>sp|Q03AF5|Y1022_LACC3 Probable transcriptional regulatory protein LSEI_1022
OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_1022
PE=3 SV=1
Length = 243
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 15/214 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K+GGP+P+ N L V++KAK ++PKD ++R + +AS++ + E YE YG GGV+
Sbjct: 36 AKQGGPDPSGNPSLRLVMDKAKAANMPKDNIKRALDKASDRDAANYDEVTYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRAR--VVNIKFTDADKDQLLD 137
I+VE LTD R+ + VR + GG MA G+V + F R V++ D D+DQ+L+
Sbjct: 96 ILVEALTDNRNRTSSTVRVAITRHGGNMAAAGAVSYMFDRKGYLVISRDDLDVDEDQMLE 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
AL+AGAED+ ++ +++ + + + L E G F N +
Sbjct: 156 DALEAGAEDM------------QTSDEAFEIYTDPKEFAQVRDALEEKGYKF-VQNELTM 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
+P + ++ +E + +I +L + DDV VYT
Sbjct: 203 VPQNLTPIPEDKVEKFQAMIDQLEDDDDVQEVYT 236
>sp|Q2RZ66|Y2667_SALRD Probable transcriptional regulatory protein SRU_2667
OS=Salinibacter ruber (strain DSM 13855 / M31)
GN=SRU_2667 PE=3 SV=2
Length = 257
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 18/232 (7%)
Query: 3 RKQSCIRGWGRKSYL--RNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEK 60
R++S + W R S + ++GG +P +N L+ LE+A+E D+ KD +ER IKR + +
Sbjct: 20 RRKSKV--WARLSQEIEKAAREGGGDPDANVALSQALERAREEDMAKDTIERAIKRGTGE 77
Query: 61 GQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRR 119
+E EKV YE Y GV++ VE T+ I R+V +R + D GG + GSV + F +
Sbjct: 78 LEEEGREKVTYEGYAPHGVAVFVEGETENINRTVKDLRNLFSDHGGNLGKDGSVAYLFEQ 137
Query: 120 ARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDIT 179
I D+ L ++A++AGAE+V D+TD Y V + D + D+
Sbjct: 138 KGRFEIAADATDEMTLFEVAVEAGAEEV-------DETD-----GTYVVTTGRDAFADVG 185
Query: 180 TKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
L EAG+P E N P TT+ + + + + LI K+ +L DV +VYT
Sbjct: 186 EALDEAGLPVEA-NALVRAPTTTVALAPDERDAVRGLIEKINDLRDVTSVYT 236
>sp|B5EJL6|Y060_ACIF5 Probable transcriptional regulatory protein Lferr_0060
OS=Acidithiobacillus ferrooxidans (strain ATCC 53993)
GN=Lferr_0060 PE=3 SV=1
Length = 250
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKV-YEVYGYGGVS 79
+ GG +P SN+ L L+KA ++ KD +ER IKR + + + E+V YE YG GGV+
Sbjct: 37 RAGGGDPASNSRLRLALDKAYGANMTKDTIERAIKRGTGELEGVDYEEVTYEGYGPGGVA 96
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
I++E +TD R+VA VR + GG M GSV ++F++ ++ + DAD+D++L+ A
Sbjct: 97 ILIETMTDNKVRTVAEVRHIFSKRGGNMGTAGSVAYQFKKLGLI-VFPADADEDRILEAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGI-PFETDNGSELL 198
L+AGAEDV VNE ER + SD ++ + L AG+ P E++ ++
Sbjct: 156 LEAGAEDV----VNE-------GERIAVYTAPSDLHS-VVLALEAAGLKPEESE--MTMI 201
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P TIEV E E LI L E DDV VY +
Sbjct: 202 PENTIEVSGEEAEKLLRLIDFLEENDDVQNVYAN 235
>sp|B7J3G0|Y059_ACIF2 Probable transcriptional regulatory protein AFE_0059
OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 /
DSM 14882 / NCIB 8455) GN=AFE_0059 PE=3 SV=1
Length = 250
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKV-YEVYGYGGVS 79
+ GG +P SN+ L L+KA ++ KD +ER IKR + + + E+V YE YG GGV+
Sbjct: 37 RAGGGDPASNSRLRLALDKAYGANMTKDTIERAIKRGTGELEGVDYEEVTYEGYGPGGVA 96
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
I++E +TD R+VA VR + GG M GSV ++F++ ++ + DAD+D++L+ A
Sbjct: 97 ILIETMTDNKVRTVAEVRHIFSKRGGNMGTAGSVAYQFKKLGLI-VFPADADEDRILEAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGI-PFETDNGSELL 198
L+AGAEDV VNE ER + SD ++ + L AG+ P E++ ++
Sbjct: 156 LEAGAEDV----VNE-------GERIAVYTAPSDLHS-VVLALEAAGLKPEESE--MTMI 201
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P TIEV E E LI L E DDV VY +
Sbjct: 202 PENTIEVSGEEAEKLLRLIDFLEENDDVQNVYAN 235
>sp|Q6MBJ7|Y1328_PARUW Probable transcriptional regulatory protein pc1328
OS=Protochlamydia amoebophila (strain UWE25) GN=pc1328
PE=3 SV=1
Length = 245
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 17/221 (7%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVY 73
K + VK GG + +N L L+KA++ ++P + ++RNIK+AS QE + E YE+Y
Sbjct: 30 KEIISAVKLGGADQKNNPRLRLALQKARDANMPNENIDRNIKKASSADQEDYHEMTYELY 89
Query: 74 GYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKD 133
G+GGV IVV+V+TD R + +R GG +A PG+V F F R ++ I +A ++
Sbjct: 90 GHGGVGIVVDVMTDNKNRISSDMRIATNKRGGTVATPGAVTFNFDRKGILQISKKNAIEE 149
Query: 134 QLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDN 193
+L A +AGAED E D D + + + + + + G E
Sbjct: 150 ELFLAATEAGAEDF------EVDND------VFIITTDPSHLYSVKDAINHLGFACEE-- 195
Query: 194 GSEL--LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+EL +P T +E E + N LI L EL+DVDAVY +
Sbjct: 196 -AELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHN 235
>sp|B3E787|Y1245_GEOLS Probable transcriptional regulatory protein Glov_1245 OS=Geobacter
lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)
GN=Glov_1245 PE=3 SV=1
Length = 247
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFI--EKVYEVYGYGGV 78
K GG +P +N L ++KAK ++PKD +ER IK+ + G E + E VYE YG GGV
Sbjct: 37 KLGGGDPAANPRLRTAIDKAKGENMPKDNIERAIKKGT-GGMEGVVYEEIVYEGYGPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
+++VEV+TD R+V+ VR + C G M + G V + F + V++ T D DQL +
Sbjct: 96 AVLVEVMTDNRNRTVSEVRSIFTKCNGNMGEAGCVAWMFDKKGVISYD-TSLDFDQLFEA 154
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
AL+AGAEDV+E ED+ E V + ++ ++ L G F++ + ++
Sbjct: 155 ALEAGAEDVVE----EDEQIE--------VYTEPSSFIEVRDALEAKGFKFQSAEIT-MI 201
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T + ++ + E +++ +L + DDV VY +
Sbjct: 202 PQTQVALEGKQAESMLKMMDRLEDCDDVQNVYAN 235
>sp|C5C5Q3|Y1989_BEUC1 Probable transcriptional regulatory protein Bcav_1989
OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333
/ NBRC 16432) GN=Bcav_1989 PE=3 SV=1
Length = 252
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 117/215 (54%), Gaps = 16/215 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGGV 78
+ GG +P N L ++KAK+ VP D ++R +KR + E G + +YE Y GGV
Sbjct: 37 RTGGGDPAGNPTLYDAIQKAKKTSVPNDNIDRAVKRGAGLEAGGADYQTIMYEGYAPGGV 96
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDA-DKDQLLD 137
+++VE LTD R+ + VR GG +ADPGSV + F R VV + TD D+D +L
Sbjct: 97 AVLVECLTDNRNRAASDVRVAFTRNGGSLADPGSVSYLFSRRGVVVVPKTDGLDEDDVLG 156
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
LDAGAE+V +D E ++V+S + + + T L++AG+ +++ ++
Sbjct: 157 AVLDAGAEEV-------NDLGE-----AFEVLSEATDLVAVRTALQDAGLDYDSAE-AQF 203
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P T IEVD + LI L + DDV V+ +
Sbjct: 204 VPATQIEVDVDGARKVLRLIDALEDSDDVQNVFAN 238
>sp|B2V2S0|Y943_CLOBA Probable transcriptional regulatory protein CLH_0943 OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=CLH_0943 PE=3
SV=1
Length = 246
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEV 72
K + VK GGP+P +N L ++ KAK ++P D + R+IK+AS E G + +YE
Sbjct: 30 KELMVAVKNGGPSPETNNRLRDIIAKAKAANMPNDTITRSIKKASGELGSVNYENIIYEG 89
Query: 73 YGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK 132
YG GV+++VE LTD RS VR GG M G V F F+ + I+ D D+
Sbjct: 90 YGPSGVAVIVETLTDNKNRSAGNVRSAFTKGGGNMGTQGCVGFMFQEKGEMVIEKADKDE 149
Query: 133 DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPF-ET 191
D+++ +ALDAGAED + DED + V +T +++ + L GI F E
Sbjct: 150 DEMMMLALDAGAEDF--------NADEDEV---FVVTTTPEDFGTVREALEAEGIEFLEA 198
Query: 192 DNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
D +++P T +D+ + ++++ L + +DV VY +
Sbjct: 199 D--VKMIPDTYTAIDEADAKKFQKMLDLLEDDEDVQEVYHN 237
>sp|B2TML4|Y1008_CLOBB Probable transcriptional regulatory protein CLL_A1008
OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=CLL_A1008 PE=3 SV=1
Length = 246
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Query: 14 KSYLRNVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEV 72
K + VK GGP+P +N L ++ KAK ++P D + R+IK+AS E G + +YE
Sbjct: 30 KELMVAVKNGGPSPETNNRLRDIIAKAKAANMPNDTITRSIKKASGELGSVNYENIIYEG 89
Query: 73 YGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK 132
YG GV+++VE LTD RS VR GG M G V F F+ + I+ D D+
Sbjct: 90 YGPSGVAVIVETLTDNKNRSAGNVRSAFTKGGGNMGTQGCVGFMFQEKGEMVIEKADKDE 149
Query: 133 DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPF-ET 191
D+++ +ALDAGAED + DED + V +T +++ + L GI F E
Sbjct: 150 DEMMMLALDAGAEDF--------NADEDEV---FVVTTTPEDFGTVREALEAEGIEFLEA 198
Query: 192 DNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
D +++P T +D+ + ++++ L + +DV VY +
Sbjct: 199 D--VKMIPDTYTAIDEADAKKFQKMLDLLEDDEDVQEVYHN 237
>sp|Q130U9|Y4171_RHOPS Probable transcriptional regulatory protein RPD_4171
OS=Rhodopseudomonas palustris (strain BisB5) GN=RPD_4171
PE=3 SV=1
Length = 248
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K G P+P N L A + A++ ++PKD +ER IK+A E + E YE YG GGV+
Sbjct: 36 AKLGTPDPAMNPRLRAAVIAARQENMPKDNIERAIKKAIGGDSENYDEIRYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
++VE LTD R+ + +R GG + + GSV F F R V+ A D +LD A
Sbjct: 96 VIVEALTDNRNRAASDIRSYFTKSGGNLGETGSVSFMFDRTGVIEYDAGKASADDMLDAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL- 198
++AGA+DV+ +E ++V ++ + + D+ L F + L+
Sbjct: 156 IEAGADDVLS------------SEGGHEVFASQETFRDVAKALE---AKFGEPRKAALIW 200
Query: 199 -PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T+ VDDE E +L+ L E DDV VY +
Sbjct: 201 KPQNTVAVDDETGEKLFKLMEHLNEHDDVQNVYAN 235
>sp|Q39XN9|Y743_GEOMG Probable transcriptional regulatory protein Gmet_0743 OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=Gmet_0743 PE=3 SV=1
Length = 247
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 120/214 (56%), Gaps = 15/214 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEA-FIEKVYEVYGYGGV 78
K GG +P N L + ++KAK ++PKD +ER IK+ + + + + E VYE YG GGV
Sbjct: 36 AKLGGGDPNGNPRLRSAVDKAKAENMPKDNIERAIKKGTGELEGVNYEEIVYEGYGPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
+++VE +TD R+V VR C G M + G V + F + ++ + DAD ++L ++
Sbjct: 96 AVLVECMTDNRNRTVGDVRSTFTKCNGNMGETGCVSWMFDKKGLIVVS-KDADFEKLFEV 154
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
AL+AGAEDV DE E Y+V++ ++ ++ L +AG E+ + ++
Sbjct: 155 ALEAGAEDV---------ADE---EEQYEVLTDPSSFMEVREALEKAGFAHESAEIT-MI 201
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T +++D + E +L+ +L + DDV VY +
Sbjct: 202 PQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYAN 235
>sp|A3DH53|Y2075_CLOTH Probable transcriptional regulatory protein Cthe_2075
OS=Clostridium thermocellum (strain ATCC 27405 / DSM
1237) GN=Cthe_2075 PE=3 SV=1
Length = 242
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEVYGYGGV 78
VK+GGP+P N+ L V+ KAK ++P + + R+IK+A+ E + E VYE YG GGV
Sbjct: 36 VKQGGPDPEVNSKLKDVIAKAKAANMPNETIMRSIKKAAGEVDSTNYEEVVYEGYGPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTD-ADKDQLLD 137
+++VE TD R+ VR + GG + G V F F + V+ I+ +D ++D L+
Sbjct: 96 AVIVEATTDNRNRTAGEVRHLFDKFGGNLGTTGCVSFMFDKKGVILIEKSDKVNEDDLMM 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
ALD GAED T ED Y+++++ ++++ + L + G F + E+
Sbjct: 156 KALDLGAEDF---------TAED---EYFEIITAPEDFSKVREGLEKEGYEF-VEAEVEM 202
Query: 198 LPITTIEVDD-EAMELNKELIAKLLELDDVDAVYTD 232
+P TT + D + +E +LI L +LDDV VY +
Sbjct: 203 VPQTTTTLTDPKHIEFMNKLIDSLEDLDDVQNVYHN 238
>sp|Q0VRK0|Y750_ALCBS Probable transcriptional regulatory protein ABO_0750 OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=ABO_0750 PE=3 SV=1
Length = 247
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 15/215 (6%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKV-YEVYGYGGV 78
K GG P N L A ++KA ++ +D ++R +KR + + ++++ YE YG GGV
Sbjct: 36 AKMGGGEPNDNPRLRAAIDKALGQNMTRDTIDRAVKRGAGGDDDGSMDEITYEGYGKGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
+++VE +TD + R+VA VR GG + GSV F F + + + D+++L+++
Sbjct: 96 AVLVETMTDNVNRTVAEVRHAFSKFGGNLGTSGSVAFLFTKRGEIFFE-PGVDEEKLMEV 154
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSD-NYTDITTKLREAGIPFETDNGSEL 197
AL+AGAEDV E+ + + V++T D ++ ++ LR AG+ F + +
Sbjct: 155 ALEAGAEDV-----------EEMGDDGFLVITTPDKSFGEVVDSLRAAGLEF-AEAEVTM 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T E+D + E +++I L +LDDV VYT+
Sbjct: 203 HPSTEAEMDTDTAETVQKMIDMLEDLDDVQNVYTN 237
>sp|C5CGU7|Y1935_KOSOT Probable transcriptional regulatory protein Kole_1935 OS=Kosmotoga
olearia (strain TBF 19.5.1) GN=Kole_1935 PE=3 SV=1
Length = 252
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 118/217 (54%), Gaps = 20/217 (9%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR-ASEKGQEAFIEKVYEVYGYGGV 78
++GG +P +N L A +E+AK ++PKD +E+ IK+ A E ++F+E +YEVY GGV
Sbjct: 36 AREGGTDPNTNNALRAAIERAKAANMPKDTMEKAIKKGAGELEGQSFVEALYEVYAPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNI---KFTDADKDQL 135
++++ LTD R+ +R ++ GG MA+ GSV + F R V+ + + +D D+ QL
Sbjct: 96 AMLIRALTDNKNRTAQEIRHLLSKHGGNMAESGSVAWMFERKGVITVPRSEISDMDEFQL 155
Query: 136 LDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGS 195
L A+DAGAED+ +D+ D R +++ + +++ L E G +
Sbjct: 156 L--AIDAGAEDI------QDEEDPVR------IITAPEEASNVKNALEENG--YTASYEL 199
Query: 196 ELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+P T+ V E +L+ L + DDV VY +
Sbjct: 200 TYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYAN 236
>sp|Q5YTE1|Y3702_NOCFA Probable transcriptional regulatory protein NFA_37020 OS=Nocardia
farcinica (strain IFM 10152) GN=NFA_37020 PE=3 SV=1
Length = 251
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGG 77
+ GG +P N L ++KAK+ VP D +ER KR + E G + +YE YG G
Sbjct: 36 ARTGGGDPEGNPTLYDAIQKAKKSSVPNDNIERARKRGAGEEAGGADWQTIMYEGYGPNG 95
Query: 78 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLD 137
V++++E LTD R+ VR + GG MADPGSV + F R +V ++ +D +L
Sbjct: 96 VAVLIECLTDNRNRAAGEVRVAMTRNGGNMADPGSVAYLFHRKGIVTLEKNGLSEDDVLM 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
LDAGAE+V +D E ++++S + + + L+ AGI +E+ S
Sbjct: 156 AVLDAGAEEV-------NDLGES-----FEIISEPGDLVAVRSALQSAGIDYESAE-SGF 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P ++ VD E +LI L + DDV VYT+
Sbjct: 203 QPSVSVAVDAEGARKVFKLIDALEDSDDVQNVYTN 237
>sp|Q6AFB7|Y1075_LEIXX Probable transcriptional regulatory protein Lxx10750 OS=Leifsonia
xyli subsp. xyli (strain CTCB07) GN=Lxx10750 PE=3 SV=1
Length = 252
Score = 107 bits (266), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 2 QRKQSCIRGWGRKSYLRNVKK-------GGPNPTSNTVLAAVLEKAKELDVPKDIVERNI 54
+ K++ I KS+ + +K GG + + N L ++KAK+ VP D ++R I
Sbjct: 11 KHKKAVIDARRAKSFAKLIKNIEVAAKIGGADLSGNPTLVDAVQKAKKTSVPNDNIDRAI 70
Query: 55 KRASEKGQEA--FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 112
KR + E+ + +YE YG GGV++++E LT+ R+ A VR + GG MADPGS
Sbjct: 71 KRGAGLTGESIDYTTIMYEGYGPGGVALLIECLTENKNRAAAEVRTAMTRNGGTMADPGS 130
Query: 113 VMFKFRRARVVNIKFTDA-DKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 171
V + F R V+ + D D+D +L L+AGAE+V D E ++V++
Sbjct: 131 VAYNFHRKGVIVVPHADGVDEDAVLVAVLEAGAEEVT-----------DLGES-FEVLTE 178
Query: 172 SDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
+ + T L+ AGI +++ + +E + T++ D EA LI L + DDV VYT
Sbjct: 179 ATDLVAARTALQAAGIDYDSAD-AEFVATVTVQTDAEAARKVFRLIDALEDSDDVQNVYT 237
>sp|Q20X07|Y4807_RHOPB Probable transcriptional regulatory protein RPC_4807
OS=Rhodopseudomonas palustris (strain BisB18)
GN=RPC_4807 PE=3 SV=1
Length = 248
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 27/220 (12%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K G P+P N L + + A++ ++PKD +ER IK+A E + E YE YG GGV+
Sbjct: 36 AKLGTPDPAMNARLRSAIIAARQENMPKDNIERAIKKAIGSDGENYDEIRYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
++VE LTD R+ + +R GG + + GSV F F R ++ A D +LD A
Sbjct: 96 VIVEALTDNRNRAASDIRSYFTKSGGNLGETGSVAFMFDRTGIIEFDAKVASADDMLDAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKL-------REAGIPFETD 192
++AGA+DV+ ++ ++V ++ D++ ++ L R+A + ++
Sbjct: 156 IEAGADDVLS------------SDSGHEVYASQDSFREVAKALEQKFGEARKAALTWK-- 201
Query: 193 NGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T+ VDDE E +LI L E DDV VY +
Sbjct: 202 ------PQNTVPVDDETGEKLLKLIDLLQEHDDVQNVYAN 235
>sp|Q1QHP3|Y3525_NITHX Probable transcriptional regulatory protein Nham_3525
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=Nham_3525 PE=3 SV=1
Length = 248
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 17/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K G P+P N L A + A+ ++PKD +ER IK+AS E++ E YE YG GGV+
Sbjct: 36 AKLGTPDPAMNARLRAAMIAARAENMPKDNIERAIKKASGHDAESYDELRYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
I++EVLTD R+ + +R GG + + GSV F F R VV A D +L+ A
Sbjct: 96 IIMEVLTDNRNRAASDIRSYFTKSGGNLGETGSVSFMFDRLGVVEYDADKASADDMLEAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL- 198
++AGA+DV+ E +++ ++ + + D+ L F L+
Sbjct: 156 VEAGADDVVS------------GEGGHEIYASQETFRDVARALEG---KFGEARKVALIW 200
Query: 199 -PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T+ VDD E +LI L E DDV VY +
Sbjct: 201 KPQNTVAVDDNTGEKLLKLIDLLNEHDDVQNVYAN 235
>sp|Q04FS7|Y768_OENOB Probable transcriptional regulatory protein OEOE_0768 OS=Oenococcus
oeni (strain ATCC BAA-331 / PSU-1) GN=OEOE_0768 PE=3
SV=1
Length = 240
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 16/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K GG +P++N L V++KAK ++PKD V+R + +A+ G F E YE Y GG++
Sbjct: 36 AKAGGADPSANASLRLVMDKAKAANMPKDNVQRALDKATGAGDVKFEEATYEGYAPGGIA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKF-RRARVV--NIKFTDADKDQLL 136
++VE TD I R+V+ VR GG + GSV F+F RR V D +DQ++
Sbjct: 96 VLVETSTDNINRTVSNVRNSFNHHGGSLGTSGSVSFQFDRRGHFVIDRQSHPDITEDQVM 155
Query: 137 DIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSE 196
+ A++AGAEDV T +D +++ S ++ + L + G ++
Sbjct: 156 EDAIEAGAEDV--------QTSDDA----FEIFSQPADFAAVEGALTDKGYDL-AESEIT 202
Query: 197 LLPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
++P +EV + E ++LI +L + DDV AVYT
Sbjct: 203 MIPQNPVEVPEADQEKFEKLIDELEDNDDVLAVYT 237
>sp|A0QWH1|Y2940_MYCS2 Probable transcriptional regulatory protein MSMEG_2940/MSMEI_2866
OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=MSMEG_2940 PE=1 SV=1
Length = 251
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 15/212 (7%)
Query: 23 GGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGGVSI 80
GG +P N L ++KAK+ VP D +ER KR + E G + YE YG GV++
Sbjct: 39 GGGDPGGNPTLYDAIQKAKKSSVPNDNIERARKRGAGEEAGGADWQNITYEGYGPNGVAV 98
Query: 81 VVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIAL 140
+VE LTD R+ VR + GG MADPGSV + F R VV ++ +D +L L
Sbjct: 99 LVECLTDNRNRAAGEVRVAMTRNGGNMADPGSVAYLFSRKGVVTLEKNGLTEDDVLLAVL 158
Query: 141 DAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPI 200
+AGAE+V D D ++++S + + T L+EAGI +++ + S P
Sbjct: 159 EAGAEEV------NDLGDS------FEIISEPSDLVAVRTALQEAGIDYDSADAS-FQPS 205
Query: 201 TTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
T+ VD E +L+ L + DDV VYT+
Sbjct: 206 VTVPVDLEGARKVLKLVDALEDSDDVQDVYTN 237
>sp|B1MCJ6|Y2888_MYCA9 Probable transcriptional regulatory protein MAB_2888c
OS=Mycobacterium abscessus (strain ATCC 19977 / DSM
44196) GN=MAB_2888c PE=3 SV=1
Length = 251
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGG 77
+ GG +P N L ++KAK+ VP D +ER KR + E G + +YE YG G
Sbjct: 36 ARTGGGDPAGNPTLYDAIQKAKKTSVPNDNIERARKRGAGEEAGGADWQTIMYEGYGPNG 95
Query: 78 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLD 137
V++++E L+D R+ VR + GG MADPGSV + F R VV ++ +D +L
Sbjct: 96 VAVLIECLSDNRNRAAGEVRVAMTRNGGSMADPGSVSYLFSRKGVVTLEKNSLSEDDVLT 155
Query: 138 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 197
L+AGAE+V +D E ++V+S + + L+EAGI +E+ S
Sbjct: 156 AVLEAGAEEV-------NDLGE-----TFEVISEPTDLVAVRQALQEAGIDYESAEAS-F 202
Query: 198 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P ++ VD E +L+ L + DDV VYT+
Sbjct: 203 QPSMSVPVDVETARKVFKLVDALEDSDDVQNVYTN 237
>sp|Q3SP09|Y2729_NITWN Probable transcriptional regulatory protein Nwi_2729 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_2729
PE=3 SV=1
Length = 248
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K G P+P N L A + A+ ++PKD +ER IK+AS E++ E YE YG GGV+
Sbjct: 36 AKLGTPDPAMNPRLRAAVIAARAENMPKDNIERAIKKASGNDAESYDELRYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
+++EVLTD R+ + +R GG + + GSV F F R V+ A D +L+ A
Sbjct: 96 VIMEVLTDNRNRAASDIRSYFTKSGGNLGETGSVSFMFDRLGVIEYDADKASVDDMLEAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL- 198
++AGA+DV+ +DE E Y ++ D + D+ L F L+
Sbjct: 156 IEAGADDVV--------SDEGGHEIY----ASQDTFRDVAKALEST---FGEARKVALIW 200
Query: 199 -PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P TI VDD E +LI L E DDV VY +
Sbjct: 201 KPQNTIAVDDNTGEKLLKLIDLLNEHDDVQNVYAN 235
>sp|B8FL13|Y2958_DESAA Probable transcriptional regulatory protein Dalk_2958
OS=Desulfatibacillum alkenivorans (strain AK-01)
GN=Dalk_2958 PE=3 SV=1
Length = 247
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKV-YEVYGYGGV 78
+ GG +P +N L + AK ++PKD ER IK+ + + + E+ YE YG GG
Sbjct: 36 ARMGGGDPDANPRLRTAINAAKAENMPKDNWERAIKKGTGELEGVNYEEFQYEGYGPGGG 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
+++VE LTD R+ A +R + CGG + + G V + F + + + + D+D L++I
Sbjct: 96 AVLVESLTDNKNRAAAEIRHIFSKCGGSLGEAGCVAWMFDKKGYIVVNQSVTDEDTLMEI 155
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
AL+AGAEDV E A ++V++ D+Y + + AGI E D L
Sbjct: 156 ALEAGAEDVRE------------AGDVFEVITQPDDYDAVKEAIDAAGIETE-DASVTKL 202
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
P T+EV + E L+ L + DDV VYT
Sbjct: 203 PQNTVEVTGKEAEQMVRLLQTLDDCDDVQNVYT 235
>sp|Q8F839|Y720_LEPIN Probable transcriptional regulatory protein LA_0720 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=LA_0720 PE=3 SV=1
Length = 249
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 15/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEVYGYGGVS 79
K GG +P N L + KAK +++PKD +ER I++ + E + E +YE +G GG++
Sbjct: 37 KMGGGDPEGNPRLRLAILKAKSVNMPKDNIERAIRKGTGELEGVTYEECLYECFGPGGIA 96
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
I+V +TDK +R+ ++ ++ GG +A GSV F + V+ ++ + +D+L+D+A
Sbjct: 97 IMVSAVTDKKSRTTPEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESSQISEDELVDVA 156
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLP 199
+ GAEDVI NE D Y+V+S DNY + L E G+ E ++ +P
Sbjct: 157 VGGGAEDVI----NEGDV--------YRVISVPDNYETVLHALNEKGLKSE-ESEIRYIP 203
Query: 200 ITTIEV-DDEAMELNKELIAKLLELDDVDAVYTD 232
+ + E+ D E E +LI +L DDV +V ++
Sbjct: 204 LVSSEIADKEVAEKIMKLIDQLDGHDDVTSVTSN 237
>sp|P62038|Y2886_LEPIC Probable transcriptional regulatory protein LIC_12886 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=LIC_12886 PE=3
SV=1
Length = 249
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 15/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS-EKGQEAFIEKVYEVYGYGGVS 79
K GG +P N L + KAK +++PKD +ER I++ + E + E +YE +G GG++
Sbjct: 37 KMGGGDPEGNPRLRLAILKAKSVNMPKDNIERAIRKGTGELEGVTYEECLYECFGPGGIA 96
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
I+V +TDK +R+ ++ ++ GG +A GSV F + V+ ++ + +D+L+D+A
Sbjct: 97 IMVSAVTDKKSRTTPEIKSILTKLGGSLATSGSVSRLFEKKGVIVLESSQISEDELVDVA 156
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLP 199
+ GAEDVI NE D Y+V+S DNY + L E G+ E ++ +P
Sbjct: 157 VGGGAEDVI----NEGDV--------YRVISVPDNYETVLHALNEKGLKSE-ESEIRYIP 203
Query: 200 ITTIEV-DDEAMELNKELIAKLLELDDVDAVYTD 232
+ + E+ D E E +LI +L DDV +V ++
Sbjct: 204 LVSSEIADKEVAEKIMKLIDQLDGHDDVTSVTSN 237
>sp|B1W3G1|Y6014_STRGG Probable transcriptional regulatory protein SGR_6014
OS=Streptomyces griseus subsp. griseus (strain JCM 4626
/ NBRC 13350) GN=SGR_6014 PE=3 SV=1
Length = 250
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 113/214 (52%), Gaps = 15/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQEAFIEKVYEVYGYGGV 78
+ GG +P N L ++KAK+ VP +E +KR E G + +YE YG GV
Sbjct: 37 RSGGVDPDGNPTLVDAIQKAKKSSVPNKNIESAVKRGGGLEAGGADYETIMYEGYGPNGV 96
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDI 138
++++E LTD R+ + VR + GG MADPGSV + F R VV + + +D +L
Sbjct: 97 AVLIECLTDNRNRAASDVRVAMTRNGGSMADPGSVSYLFNRKGVVILPKGELTEDDVLGA 156
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
LDAGAE+V +D E ++VVS + + + T L+EAGI +++ + L
Sbjct: 157 VLDAGAEEV-------NDLGE-----TFEVVSEATDMVAVRTALQEAGIDYDSAE-ANFL 203
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P +E+D+E +LI L + DDV V+ +
Sbjct: 204 PTMQVELDEEGARKIFKLIDALEDSDDVQNVFAN 237
>sp|A4TD17|Y3828_MYCGI Probable transcriptional regulatory protein Mflv_3828
OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_3828
PE=3 SV=1
Length = 251
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 115/230 (50%), Gaps = 19/230 (8%)
Query: 9 RGWGRKSYLRNV----KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQ 62
RG ++N+ + GG +P N L ++KAK+ VP D +ER KR + E G
Sbjct: 21 RGKNFAKLIKNIEVAARTGGGDPGGNPTLYDAIQKAKKNSVPNDNIERARKRGAGEEAGG 80
Query: 63 EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARV 122
+ YE YG GV+I+VE LTD R+ VR + GG MADPGSV + F R V
Sbjct: 81 ADWQNITYEGYGPNGVAILVECLTDNKNRAAGEVRVAMTRNGGNMADPGSVAYLFTRKGV 140
Query: 123 VNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKL 182
V + +D +L LDAGAEDV D D ++++S + + T L
Sbjct: 141 VTLDKNGLSEDDVLAAVLDAGAEDV------NDLGDS------FEIISEPTDLVAVRTAL 188
Query: 183 REAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
++AGI +++ S P ++ VD + +L+ L + DDV VYT+
Sbjct: 189 QDAGIEYDSAEAS-FQPSVSVPVDLDGARKVLKLVDALEDSDDVQDVYTN 237
>sp|Q2SCK9|Y4926_HAHCH Probable transcriptional regulatory protein HCH_04926 OS=Hahella
chejuensis (strain KCTC 2396) GN=HCH_04926 PE=3 SV=1
Length = 248
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 14/212 (6%)
Query: 22 KGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEA-FIEKVYEVYGYGGVSI 80
K G P N L AV++KA +++ KD +E+ I+R + G ++ F E YE YG GGV++
Sbjct: 37 KNGALPEDNPRLRAVIDKALTVNMKKDTIEKAIQRGAGGGDDSNFDELTYEGYGPGGVAV 96
Query: 81 VVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIAL 140
VEV+TD R+VA VR GG + GSV + F + V+ + D D+D +++ AL
Sbjct: 97 YVEVMTDNRNRTVAEVRHAFSKHGGNLGTDGSVAYLFSKTGVI-LFAPDVDEDAVMEAAL 155
Query: 141 DAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPI 200
+AGA+DVI N+D + E V ++++++ + L AG+ E+ + S ++P
Sbjct: 156 EAGAQDVI---ANDDGSVE--------VQTSAEDFMAVKDALMAAGLTPESADVS-MVPA 203
Query: 201 TTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
T +D E E +LI L +LDDV VY++
Sbjct: 204 TMAPLDVENGEKVMKLIEMLEDLDDVQNVYSN 235
>sp|Q891Z5|Y2215_CLOTE Probable transcriptional regulatory protein CTC_02215
OS=Clostridium tetani (strain Massachusetts / E88)
GN=CTC_02215 PE=3 SV=1
Length = 246
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 15/214 (7%)
Query: 21 KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR-ASEKGQEAFIEKVYEVYGYGGVS 79
K+GG NP +N+ L V+ KA+ ++P+D + R IK+ A E + E YE YG GV+
Sbjct: 37 KEGGSNPDTNSKLRDVIAKARANNMPQDTISRAIKKGAGELEGVNYEEMTYEGYGPNGVA 96
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFR-RARVVNIKFTDADKDQLLDI 138
VV LTD R+ VR GG + + G V + F+ + +++ + D D+D+++ +
Sbjct: 97 FVVSTLTDNKNRTAGNVRAAFSKHGGNLGETGCVGWMFQSKGQMIIERNEDMDEDEIMMV 156
Query: 139 ALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL 198
ALDAGAED + +E +++++T +++ ++ KL G F + + ++
Sbjct: 157 ALDAGAEDF------------ESSEEVFEIITTPESFGEVREKLEAEGFEFISAEVT-MI 203
Query: 199 PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P TTIE+ E ++LI KL + DDV VY +
Sbjct: 204 PDTTIEISMERAAGLQKLIDKLEDDDDVQNVYHN 237
>sp|Q4K7D6|Y4766_PSEF5 Probable transcriptional regulatory protein PFL_4766 OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_4766
PE=3 SV=1
Length = 248
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 2 QRKQSCIRGWGRKSYLRNV----KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 57
+ +Q RG ++R + ++GG +P SN L L+KA ++ +DI++R I R
Sbjct: 14 KERQDAKRGKIFTKWIRELTVAARQGGGDPNSNPRLRLALDKALGANMSRDIIDRAIARG 73
Query: 58 S-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 116
+ G + +E YE YG GV+++VE +TD R+ AAVR CGG + GSV +
Sbjct: 74 TGAAGSDDVVELTYEGYGPNGVAVMVECMTDNRNRTAAAVRHAFSKCGGNLGTDGSVAYL 133
Query: 117 FRRARVVNIKFTDA-DKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNY 175
F R I F + D+D L++ A++A A+DV+ NED + V ++ +
Sbjct: 134 FERKG--QITFAEGVDEDALMEAAMEADADDVVS---NEDGS--------IDVFTSFAGF 180
Query: 176 TDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+ L AG D +LP T+ E+D E E +LI L +LDDV VY++
Sbjct: 181 YGVRNALEAAGFT-AADAEIVMLPTTSAELDLEGAEKVLKLIDMLEDLDDVQNVYSN 236
>sp|Q0S1C9|Y6891_RHOSR Probable transcriptional regulatory protein RHA1_ro06891
OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro06891 PE=3
SV=2
Length = 250
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 19/230 (8%)
Query: 9 RGWGRKSYLRNV----KKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRAS--EKGQ 62
RG ++N+ + GG +P N L ++KAK+ VP D +ER KR + E G
Sbjct: 21 RGKAFAKLIKNIEVAARTGGGDPAGNPTLYDAIQKAKKTSVPNDNIERARKRGAGEEAGG 80
Query: 63 EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARV 122
+ +YE YG GV++++E LTD R+ VR + GG MADPGSV + F R V
Sbjct: 81 ADWQTIMYEGYGPNGVAVLIECLTDNRNRAAGEVRTAMTRNGGNMADPGSVSYLFTRKGV 140
Query: 123 VNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKL 182
V ++ D +D +L LDAGAE+V + DT +++VS + + + L
Sbjct: 141 VTLEKGDQSEDDVLMAVLDAGAEEVTDLG----DT--------FEIVSEPTDLVAVRSAL 188
Query: 183 REAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
+EAGI +++ ++ + VD + +L+ L E DDV VYT+
Sbjct: 189 QEAGIDYDSAE-ADFRASVEVPVDADGARKVFKLVDALEESDDVQNVYTN 237
>sp|A1WZ62|Y2210_HALHL Probable transcriptional regulatory protein Hhal_2210
OS=Halorhodospira halophila (strain DSM 244 / SL1)
GN=Hhal_2210 PE=3 SV=1
Length = 247
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 14/211 (6%)
Query: 23 GGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR-ASEKGQEAFIEKVYEVYGYGGVSIV 81
GGP+P N L L++A +++PKD + IK+ A + EA+ E YE YG GG +I+
Sbjct: 39 GGPDPEMNARLRLALDRAFAVNLPKDRADAAIKKGAGLEEAEAYEEIRYEGYGPGGSAIM 98
Query: 82 VEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALD 141
V+ +TD R+V+ VR GGKM SV + F+ R V + D DQ+L++AL+
Sbjct: 99 VDCMTDNRNRTVSEVRHAFSKHGGKMGTDNSVAYLFQE-RGVLVFAPGTDSDQVLEVALE 157
Query: 142 AGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPIT 201
AGA+D++E N+D + E V++T + Y + L EAG+ E + ++ P
Sbjct: 158 AGADDLVE---NDDGSLE--------VLTTPEAYRGVRDALTEAGLEPEQADVTQ-RPDL 205
Query: 202 TIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
T++++ + LI +L +LDDV VYT+
Sbjct: 206 TVQIEGDNAVSTARLIERLEDLDDVQHVYTN 236
>sp|Q89U83|Y1534_BRAJA Probable transcriptional regulatory protein blr1534
OS=Bradyrhizobium japonicum (strain USDA 110) GN=blr1534
PE=3 SV=1
Length = 248
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVS 79
K G P+P N L A + A+ ++PKD +ER IK+A E + E YE YG GGV+
Sbjct: 36 AKLGTPDPAMNPRLRAAVIAARAENMPKDNIERAIKKALGSDGENYDEIRYEGYGPGGVA 95
Query: 80 IVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIA 139
++VE LTD R+ + +R GG + + GSV F F R ++ + A D +LD A
Sbjct: 96 VIVEALTDNRNRAASDIRSFFTKSGGNLGETGSVSFMFDRTGIIEYDRSVASDDAVLDAA 155
Query: 140 LDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL- 198
++AGA+DV+ E +++ ++++ Y D+ L F + L+
Sbjct: 156 IEAGADDVVS------------GEGGHEIYASTEGYRDVAKALE---AKFGEPRKAALIW 200
Query: 199 -PITTIEVDDEAMELNKELIAKLLELDDVDAVYTD 232
P T+ VDDE E +L+ L E DDV VY +
Sbjct: 201 KPQNTVAVDDETGEKLLKLMDLLNEHDDVQNVYAN 235
>sp|Q838A9|Y663_ENTFA Probable transcriptional regulatory protein EF_0663 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_0663 PE=3
SV=1
Length = 242
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 20 VKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQ-EAFIEKVYEVYGYGGV 78
K GGP+P N L ++KAK ++P D + R IK+AS G+ E + E YE YG GGV
Sbjct: 36 AKAGGPDPAMNPALRLAVDKAKSANMPNDNIARAIKKASSAGEGEHYDEVTYEGYGPGGV 95
Query: 79 SIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDA--DKDQLL 136
+++V LTD R+ VR GG + + GSV + F R + IK D ++D +L
Sbjct: 96 AVLVHALTDNRNRTATNVRVAFTRNGGSLGETGSVNYMFDRKGYIVIKREDHAIEEDDML 155
Query: 137 DIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSE 196
++ L+AG ED+ P +++ + +++T + L +AG +
Sbjct: 156 EVVLEAGGEDIETSP------------EVFEIYTAPEDFTAVRDALEQAGYSLAQAELT- 202
Query: 197 LLPITTIEVDDEAMELNKELIAKLLELDDVDAVYT 231
++P T + ++DE + L+ KL + DDV V+T
Sbjct: 203 MVPQTLLTLNDEQKAQLERLVDKLEDDDDVSEVFT 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,612,085
Number of Sequences: 539616
Number of extensions: 3762578
Number of successful extensions: 14096
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 12106
Number of HSP's gapped (non-prelim): 797
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)