BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026746
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIX5|BH092_ARATH Transcription factor bHLH92 OS=Arabidopsis thaliana GN=BHLH92 PE=2
SV=1
Length = 247
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 23 ALPVNQSAFVAYANRPRTEFVSQNAGNGSNSLSANKRMIQFLRKIQPAKMEHPELDSERG 82
++P+ +SAF +Y TE + S+ ++ KRM+ LRK K + ER
Sbjct: 31 SVPI-RSAFRSYMKD--TELRMMSPKISSSKVNVKKRMVNLLRKNWEEKKNTVAPEKERS 87
Query: 83 HRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYE 142
RH++ ER RRE+++Q+YLALHS+LP TKNDKNSIV+ + I +LQ K+EL R+
Sbjct: 88 RRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKV 147
Query: 143 LESNLGLKNGG-----TKVRVNVDNPTSGVDSMLEVLKCLKDLGSSTRSIQAEFSDQKLT 197
+E K+G TKVRVN+ P SG+DSMLE L LK +G+ +++ A FS Q+ +
Sbjct: 148 IEEK-SAKDGHDEMSETKVRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFS 206
Query: 198 AVLDIETQMGAGAVEKDVQRALQKVEDKLLF 228
A + IETQ+ VEK V+R LQ+ E KLLF
Sbjct: 207 ATMTIETQIRGEEVEKRVERRLQETEWKLLF 237
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYELE 144
H+I+ER RRE+ +++ AL S+LPPGTK DK S++ + LQ +L +N E+E
Sbjct: 290 HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREVE 349
Query: 145 SNLG 148
+ L
Sbjct: 350 AKLA 353
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 79 SERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELER 138
S +++++ER RR++ Q AL S++P TK DK SI+K + I LQ +++LE
Sbjct: 50 SSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEA 109
Query: 139 KNYELESN 146
+ ELES
Sbjct: 110 EIRELEST 117
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 50/197 (25%)
Query: 75 PELDSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQ 134
P+ E G+ H ++E+ RRE+ + ++ L SI+P +K DK SI+ T + +LQ Q
Sbjct: 397 PDTPEETGN-HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ 455
Query: 135 ELE--RKNYELESNLGL--------------------KNGGTKVRVNVDNPT----SGVD 168
ELE R++ + E+ + + K G+ V V D P +G+
Sbjct: 456 ELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLT 515
Query: 169 S-----------------------MLEVLKCLKDLGSSTRSIQAEFSDQKLTAVLDIETQ 205
+LE++ + DL + S+Q+ D L ++ + +
Sbjct: 516 DNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVNCKHK 575
Query: 206 MGAGAVEKDVQRALQKV 222
A +Q ALQ+V
Sbjct: 576 GTKIATTGMIQEALQRV 592
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYELE 144
HV+ ER RRE+ + ++ L S++P TK DK SI+ T ++ L+ ELE ++E +
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 145 ---SNLGLKNGGTKVRVNVDNPTSGVDS--------MLEVLKCLKDLGSSTRSIQAEFSD 193
+ + +V V++ ++ +L++L+ L +LG T ++ +D
Sbjct: 424 HKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVND 483
Query: 194 QKLTAVLDIETQMGAGAVEKDVQRALQKV 222
A + + + G A +V+RA+ +V
Sbjct: 484 HDFEAEIRAKVR-GKKASIAEVKRAIHQV 511
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHE----LQCCKQELERKN 140
HV ER RRE+ Q + AL S++P +K DK S++ + I+E L+ + E ER
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
Query: 141 Y------ELESNLGLKNGGTKVRVNVDNP 163
Y L+S++ ++ G V V ++ P
Sbjct: 494 YSSNPPISLDSDINVQTSGEDVTVRINCP 522
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 72 MEHPELDSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQC 131
++ PE E G+ H + E+ RRE+ + ++ L I+P K DK SI+ T +
Sbjct: 430 LDSPEARDETGN-HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYL----- 483
Query: 132 CKQELERKNYELESNLGLKNGGTKVRVNVDNPTSGVDSMLEVLKCLKDLGSSTRS 186
QELER+ ELES R + D T G +M C D G T +
Sbjct: 484 --QELERRVQELES----------CRESTDTETRGTMTMKRKKPC--DAGERTSA 524
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 84 RHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYEL 143
R +I+ER RR R + AL S++P TK DK SIV + ELQ ++L+ L
Sbjct: 131 RTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGL 190
Query: 144 ESNLGLKNG 152
E++L G
Sbjct: 191 EASLNSTGG 199
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 79 SERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELER 138
S ++V++ER RR++ Q AL S++P +K DK S++K + + + EL ++ LE
Sbjct: 49 SPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEA 108
Query: 139 KNYELES 145
+ ELES
Sbjct: 109 EIRELES 115
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELE 137
HV++ER RRE+ + +L L S+LP + +K SI+ T + ELQ QELE
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELE 469
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELE 137
HV++ER RRE+ + +L L S+LP + +K SI+ T + ELQ QELE
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELE 471
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQC-----------CK 133
HV ER RRE+ Q + AL +++P +K DK S++ I+EL+ K
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIK 512
Query: 134 QELERKNYELESNLGLKNGG---------TKVRVNVDNPTSGVDSMLEVLKCLKDLGSST 184
+LE EL +GG V + ++ G D+M+ V SS
Sbjct: 513 NQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVE-------SSK 565
Query: 185 RSIQAEFSDQKLTAVLDIETQMGAGAVEKDVQRALQKVEDKLLFRHYQE 233
R+ A + ++A++D+E ++ ++ +Q+ K+ FR Y +
Sbjct: 566 RNHPAA---RLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQ 611
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYELE 144
HV ERMRRE+ + AL +++P +K DK S+++ I+EL+ + +E + + +E
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIE 403
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYELE 144
HV ER RRE+ Q + +L +++P +K DK S++ + I+EL+ Q+ E E++
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQ 475
Query: 145 SNL 147
L
Sbjct: 476 KKL 478
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYELE 144
HV ER RRE+ Q + +L +++P +K DK S++ + I EL+ Q+ E EL+
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQ 476
Query: 145 SNLGLKN 151
+ + N
Sbjct: 477 KQIDVMN 483
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 53 SLSANKRMIQFLRKIQPAKM-EHPELDSERGHRHVINERMRRERERQNYLALHSILPPGT 111
SL A ++ + + +P K P E HV ER RRE+ Q + AL S++P +
Sbjct: 363 SLLAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNIS 422
Query: 112 KNDKNSIVKTTANMIHELQ 130
K DK S++ + I ELQ
Sbjct: 423 KMDKASLLGDAISYIKELQ 441
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELE--RKNYE 142
H+I ER RRE+ Q ++AL +++P K DK S++ I LQ ELE +K
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 143 LESNLGLKNGGTKVRVNVDNPTSGVDSMLEVLKCLKDLGSSTRSIQAEFSDQKLTAVLDI 202
LES + +K K ++ +D+ S E DL I+ FSD+ + +
Sbjct: 213 LESMVLVK----KSKLILDDNNQSFSSSCE--DGFSDLD--LPEIEVRFSDEDVLIKILC 264
Query: 203 ETQMGAGA 210
E Q G A
Sbjct: 265 EKQKGHLA 272
>sp|P34474|HLH11_CAEEL Helix-loop-helix protein 11 OS=Caenorhabditis elegans GN=hlh-11
PE=4 SV=3
Length = 431
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 68 QPAKMEHPELDSERGHRHV-----INERMRRERERQNYLALHSILP--PGTKNDKNSIVK 120
QPA + LD +R R NER R + +LAL ++LP G K K +I++
Sbjct: 95 QPAPLSPTSLDPDRRSRMRRQIANCNERRRMQSINAGFLALRALLPRKEGEKLSKAAILQ 154
Query: 121 TTANMIHELQCCKQE 135
TA+M+H+L K E
Sbjct: 155 QTADMVHQLLGHKGE 169
>sp|P18444|MYCN_CHICK N-myc proto-oncogene protein OS=Gallus gallus GN=MYCN PE=3 SV=1
Length = 441
Score = 37.4 bits (85), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQCCKQ 134
DSER H I ER RR R ++L L +P KN+K + I+K +H LQ +Q
Sbjct: 356 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEQ 415
Query: 135 EL 136
+L
Sbjct: 416 KL 417
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 84 RHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYEL 143
++++ ER RR++ AL S++P TK D+ SI+ N + ELQ +EL+ EL
Sbjct: 314 KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQD---EL 370
Query: 144 ESNLGLKNGGTKVRVNVDNPTSGVDSMLEVLKCLKDLGSSTRSIQAEFSDQK 195
E N ++G + + + + V L C ++ S + + E S+ K
Sbjct: 371 EENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDK 422
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 82 GHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
HV+ ER RRE+ + ++AL ++LP K DK +I+ + + +LQ
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQ 165
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 75 PELDSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
P E HV ER RRE+ Q + AL +++P +K DK S++ I ++Q
Sbjct: 311 PANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQ 366
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 85 HVINERMRRERERQNYLALHSILPP-GTKNDKNSIVKTTANMIHELQCCKQELERKNYE 142
H+ ER RR++ R + LH++LP K DK++IV + I L+ Q+LE + E
Sbjct: 74 HIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLE 132
>sp|Q61976|MYCN_MARMO N-myc proto-oncogene protein OS=Marmota monax GN=MYCN PE=3 SV=1
Length = 460
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQCCKQ 134
DSER H I ER RR R ++L L +P KN+K + I+K +H LQ +
Sbjct: 375 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEH 434
Query: 135 EL 136
+L
Sbjct: 435 QL 436
>sp|P03966|MYCN_MOUSE N-myc proto-oncogene protein OS=Mus musculus GN=Mycn PE=2 SV=2
Length = 462
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQCCKQ 134
DSER H I ER RR R ++L L +P KN+K + I+K +H LQ +
Sbjct: 377 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEH 436
Query: 135 EL 136
+L
Sbjct: 437 QL 438
>sp|Q63379|MYCN_RAT N-myc proto-oncogene protein OS=Rattus norvegicus GN=Mycn PE=3 SV=1
Length = 462
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQCCKQ 134
DSER H I ER RR R ++L L +P KN+K + I+K +H LQ +
Sbjct: 377 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEH 436
Query: 135 EL 136
+L
Sbjct: 437 QL 438
>sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens GN=MYCN PE=1 SV=2
Length = 464
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQCCKQ 134
DSER H I ER RR R ++L L +P KN+K + I+K +H LQ +
Sbjct: 379 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEH 438
Query: 135 EL 136
+L
Sbjct: 439 QL 440
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
H I ER+RRER + AL ++P G K DK S++ + + LQ
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 75 PELDSERGHR---HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
P++ + RG H I ER+RRER + +L ++P G K DK S++ + + LQ
Sbjct: 128 PKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 79 SERGHRHVINERMRRERERQNYLALHSILPPG--TKNDKNSIVKTTANMIHELQCCKQEL 136
S G ER+RRE+ + ++ L S+L PG K DK +I+ ++++L+ +L
Sbjct: 129 SRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKL 188
Query: 137 ERKNYEL 143
E N +L
Sbjct: 189 EETNQKL 195
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
H++ ER RRE+ Q ++AL +++P K DK S++ I LQ
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 89 ERMRRERERQNYLALHSILPPG--TKNDKNSIVKTTANMIHELQCCKQELERKNYEL 143
E++RRE+ ++ L S+L PG K DK++I+ ++++L+ EL+ N +L
Sbjct: 171 EKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKL 227
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQ 130
HV+ ER RR++ + +AL ++LP K DK ++++ + +LQ
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQ 178
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 88 NERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELE 137
+ER RRER Q L +++P TK +K I + I+EL KQ+LE
Sbjct: 268 SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLE 317
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 89 ERMRRERERQNYLALHSILPPG--TKNDKNSIVKTTANMIHELQCCKQELERKNYELESN 146
E+ RR+R ++ L +IL PG K DK +I+ M+ +L+ Q+L+ N L+
Sbjct: 80 EKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDK 139
Query: 147 L 147
+
Sbjct: 140 I 140
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 74 HPELDSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCK 133
HP + S HV E+ RRE+ + AL +I+P ++ DK S++ + I L+
Sbjct: 244 HPAVLS-----HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKI 298
Query: 134 QELE 137
+LE
Sbjct: 299 DDLE 302
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 69 PAKMEHPELDSERGHR---HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANM 125
P + P + + RG H I ER+RRER + +L ++P K DK S++
Sbjct: 91 PVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 126 IHELQ 130
+ LQ
Sbjct: 151 VRFLQ 155
>sp|P24793|MYCN_XENLA N-myc protein OS=Xenopus laevis GN=mycn PE=2 SV=1
Length = 437
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQ 130
DSER H I ER RR R ++L L +P KN+K + I+K +H L
Sbjct: 352 DSERRRNHNILERQRRNDLRSSFLTLRDHVPELIKNEKAAKVVILKKATEYVHSLH 407
>sp|A7RWP6|EIF3E_NEMVE Eukaryotic translation initiation factor 3 subunit E
OS=Nematostella vectensis GN=v1g163572 PE=3 SV=1
Length = 448
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 163 PTSGVDSMLEVLKCLKDLGSSTRSIQAEFSDQKLTA 198
PTS V+ +EV+K LKDL + T I FSD + TA
Sbjct: 68 PTSLVEKRVEVVKELKDLQAQTEPIINCFSDPEFTA 103
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 70 AKMEHPELDSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHEL 129
+K E E+ +++ H ER RR R + L +ILP K DK S++ T +EL
Sbjct: 84 SKTESKEVAAKK---HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNEL 140
Query: 130 QCCKQELERKNYELESNLGL 149
+ Q++ LE NL L
Sbjct: 141 KKMVQDIP-TTPSLEDNLRL 159
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 86 VINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKNYEL-E 144
+ R RRER + L +++P GTK D S++ AN + L+ + LE +L +
Sbjct: 281 TVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQ 340
Query: 145 SNLGLKNGGT 154
+NL + T
Sbjct: 341 TNLSFSSAPT 350
>sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Rattus
norvegicus GN=Sohlh2 PE=2 SV=1
Length = 462
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 70 AKMEHPELDSERGHRHVINERMRRERERQNYLALHSILP--PGTKNDKNSIVKTTANMIH 127
A + PE + + H E++RRER + L ++LP G K+D S+++ T + +
Sbjct: 190 APLSSPERNKKASFLHSSKEKLRRERIKFCCEQLRTLLPYVKGRKSDVASVIEATVDYVK 249
Query: 128 ELQ 130
+++
Sbjct: 250 QVR 252
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 85 HVINERMRRERERQNYLALHSILPP--GTKNDKNSIVKTTANMIHELQCCKQELE 137
H+ ER RR++ + L S++PP + D+ SIV N + EL+ Q +E
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSME 181
>sp|O31151|UVRA_ZYMMO UvrABC system protein A OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=uvrA PE=3 SV=2
Length = 946
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 137 ERKNYELESNLGLKNGGTKVRVNVDNPTSGV-----DSMLEVLKCLKDLGSSTRSIQAEF 191
E + L S +G +G + V +D P+ G+ D +LE LK L+DLG+S ++
Sbjct: 496 ESQRIRLASQIG--SGLSGVLYVLDEPSIGLHQRDNDRLLETLKRLRDLGNSVLVVE--- 550
Query: 192 SDQKLTAVLDIETQMGAGA 210
D+ + D MG GA
Sbjct: 551 HDEDAIRLADYVVDMGPGA 569
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPP--GTKNDKNSIVKTTANMIHELQCCKQE 135
D ++ HV ER RR++ ++ L S++P + D+ SI+ I ELQ Q
Sbjct: 97 DGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQS 156
Query: 136 LE----RKNY 141
LE RK Y
Sbjct: 157 LEAKKQRKTY 166
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 85 HVINERMRRERERQNYLALHSILPPGTKNDKNSIVKTTANMIHELQCCKQELERKN 140
H ++E+ RR R + AL S++P K DK S++ + +LQ Q L +N
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
>sp|P0C6V1|R1A_CVMJH Replicase polyprotein 1a OS=Murine coronavirus (strain JHM) GN=1a
PE=1 SV=1
Length = 4474
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 20 DNEALPVNQSAFVAYANRPRTEFVSQNAGNGSNSLSANKRMIQFLRKIQPAKMEHPELDS 79
DN L QS FV A+ E +N S SAN++ I+ L K + +
Sbjct: 4011 DNTVLQALQSEFVNMASFVEYELAKKNLDEAKASGSANQQQIKQLEK--ACNIAKSAYER 4068
Query: 80 ERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIV 119
+R + R+ ER LAL ++ NDK S V
Sbjct: 4069 DRA--------VARKLERMADLALTNMYKEARINDKKSKV 4100
>sp|P0C6V0|R1A_CVMA5 Replicase polyprotein 1a OS=Murine coronavirus (strain A59) GN=1a
PE=1 SV=1
Length = 4468
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 20 DNEALPVNQSAFVAYANRPRTEFVSQNAGNGSNSLSANKRMIQFLRKIQPAKMEHPELDS 79
DN L QS FV A+ E +N S SAN++ I+ L K + +
Sbjct: 4005 DNTVLQALQSEFVNMASFVEYELAKKNLDEAKASGSANQQQIKQLEK--ACNIAKSAYER 4062
Query: 80 ERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNSIV 119
+R + R+ ER LAL ++ NDK S V
Sbjct: 4063 DRA--------VARKLERMADLALTNMYKEARINDKKSKV 4094
>sp|Q9NGP5|ABCG2_DICDI ABC transporter G family member 2 OS=Dictyostelium discoideum
GN=abcG2 PE=1 SV=2
Length = 1328
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 146 NLGLKNGGTKVRVNVDNPTSGVDS--MLEVLKCLKDLGSSTRSI 187
N+G++ + +D PTSG+DS L+V+ +K + SS RSI
Sbjct: 869 NIGVELASDPQLLFLDEPTSGLDSSAALKVMNLIKKIASSGRSI 912
>sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus GN=Mycs PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 78 DSERGHRHVINERMRRERERQNYLALHSILPPGTKNDKNS---IVKTTANMIHELQ 130
D ER H ER RR+ R ++L L ++P N+K + I+K IH LQ
Sbjct: 344 DIERRRNHNRMERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTLQ 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,068,312
Number of Sequences: 539616
Number of extensions: 3460720
Number of successful extensions: 10814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 10699
Number of HSP's gapped (non-prelim): 176
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)