BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026747
         (234 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q4AE70|CARM1_RAT Histone-arginine methyltransferase CARM1 OS=Rattus norvegicus
           GN=Carm1 PE=1 SV=1
          Length = 651

 Score = 35.0 bits (79), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 24/111 (21%)

Query: 26  HYQSSSDDEANASAAAKRTVRYDLPRNSVDSGLPSAFDVFSQISGPPRFLNNSLEVKASS 85
           HY S S++  N  +       Y+L      +G+P+A+D+ S I+G     +N+L   A++
Sbjct: 489 HYTSPSENMWNTGST------YNLSSGVAVAGMPTAYDLSSVIAGGSSVGHNNLIPLANT 542

Query: 86  IDVNSQQSRRRNRKNKKELPAGAVMEAKAQLVGI--HDRVRSDMEGDQPPA 134
             VN   SR            G++M       GI   +RV     GD PP 
Sbjct: 543 GIVNHTHSRM-----------GSIMST-----GIVQGNRVAGPWAGDLPPG 577


>sp|Q9WVG6|CARM1_MOUSE Histone-arginine methyltransferase CARM1 OS=Mus musculus GN=Carm1
           PE=1 SV=2
          Length = 608

 Score = 32.0 bits (71), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 26  HYQSSSDDEANASAAAKRTVRYDLPRNSVDSGLPSAFDVFSQISGPPRFLNNSLEVKASS 85
           HY S S++  N  +       Y+L      +G+P+A+D+ S I+G     +N+L   A++
Sbjct: 489 HYTSPSENMWNTGST------YNLSSGVAVAGMPTAYDLSSVIAGGSSVGHNNLIPLANT 542

Query: 86  IDVNSQQSR 94
             VN   SR
Sbjct: 543 GIVNHTHSR 551


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.123    0.338 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,467,638
Number of Sequences: 539616
Number of extensions: 3095383
Number of successful extensions: 13607
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 13512
Number of HSP's gapped (non-prelim): 112
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)