Your job contains 1 sequence.
>026750
MSVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKP
IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY
LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG
NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYEGFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026750
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2034625 - symbol:CLP2 "CLP protease proteolyti... 881 3.2e-88 1
TIGR_CMR|CHY_0325 - symbol:CHY_0325 "ATP-dependent Clp pr... 337 1.4e-30 1
UNIPROTKB|P0C312 - symbol:clpP "ATP-dependent Clp proteas... 335 2.3e-30 1
UNIPROTKB|P0C313 - symbol:clpP "ATP-dependent Clp proteas... 335 2.3e-30 1
UNIPROTKB|P0C314 - symbol:clpP "ATP-dependent Clp proteas... 335 2.3e-30 1
UNIPROTKB|Q6ENE9 - symbol:clpP "ATP-dependent Clp proteas... 335 2.3e-30 1
TIGR_CMR|GSU_1792 - symbol:GSU_1792 "ATP-dependent Clp pr... 323 4.4e-29 1
TIGR_CMR|SO_1794 - symbol:SO_1794 "ATP-dependent Clp prot... 319 1.2e-28 1
UNIPROTKB|Q16740 - symbol:CLPP "Putative ATP-dependent Cl... 314 3.9e-28 1
TIGR_CMR|CPS_3785 - symbol:CPS_3785 "ATP-dependent Clp pr... 314 3.9e-28 1
UNIPROTKB|P63786 - symbol:clpP "ATP-dependent Clp proteas... 313 5.0e-28 1
TIGR_CMR|BA_5380 - symbol:BA_5380 "ATP-dependent Clp prot... 310 1.0e-27 1
UNIPROTKB|Q2KHU4 - symbol:CLPP "Putative ATP-dependent Cl... 306 2.8e-27 1
TIGR_CMR|VC_1922 - symbol:VC_1922 "ATP-dependent Clp prot... 306 2.8e-27 1
RGD|1588583 - symbol:Clpp "ClpP caseinolytic peptidase, A... 306 2.8e-27 1
UNIPROTKB|F1SBT2 - symbol:CLPP "ATP-dependent Clp proteas... 304 4.5e-27 1
MGI|MGI:1858213 - symbol:Clpp "ClpP caseinolytic peptidas... 304 4.5e-27 1
ZFIN|ZDB-GENE-030131-7860 - symbol:clpp "ClpP caseinolyti... 304 4.5e-27 1
UNIPROTKB|P0A6G7 - symbol:clpP species:83333 "Escherichia... 300 1.2e-26 1
UNIPROTKB|E2QUV8 - symbol:CLPP "ATP-dependent Clp proteas... 297 2.5e-26 1
UNIPROTKB|Q6E6T0 - symbol:Q6E6T0 "ATP-dependent Clp prote... 296 3.2e-26 1
TIGR_CMR|CJE_0185 - symbol:CJE_0185 "ATP-dependent Clp pr... 296 3.2e-26 1
FB|FBgn0032229 - symbol:CG5045 species:7227 "Drosophila m... 295 4.0e-26 1
TIGR_CMR|NSE_0752 - symbol:NSE_0752 "ATP-dependent Clp pr... 293 6.6e-26 1
TAIR|locus:2178282 - symbol:NCLPP7 "nuclear-encoded CLP p... 292 8.4e-26 1
TIGR_CMR|ECH_0901 - symbol:ECH_0901 "ATP-dependent Clp pr... 288 2.2e-25 1
TIGR_CMR|APH_0970 - symbol:APH_0970 "ATP-dependent Clp pr... 286 3.6e-25 1
TIGR_CMR|BA_2788 - symbol:BA_2788 "ATP-dependent Clp prot... 285 4.6e-25 1
WB|WBGene00014172 - symbol:clpp-1 species:6239 "Caenorhab... 285 4.6e-25 1
TIGR_CMR|DET_0710 - symbol:DET_0710 "ATP-dependent Clp pr... 282 9.7e-25 1
TAIR|locus:2196120 - symbol:CLPP5 "nuclear encoded CLP pr... 281 1.2e-24 1
UNIPROTKB|G4MLM6 - symbol:MGG_06757 "ATP-dependent Clp pr... 278 2.6e-24 1
UNIPROTKB|P63783 - symbol:clpP2 "ATP-dependent Clp protea... 278 2.6e-24 1
TIGR_CMR|CBU_0738 - symbol:CBU_0738 "ATP-dependent Clp pr... 277 3.3e-24 1
TIGR_CMR|SPO_1003 - symbol:SPO_1003 "ATP-dependent Clp pr... 275 5.3e-24 1
TAIR|locus:2163538 - symbol:CLPP4 "CLP protease P4" speci... 268 2.9e-23 1
TAIR|locus:2033344 - symbol:CLPP3 "CLP protease proteolyt... 265 6.1e-23 1
UNIPROTKB|P0A526 - symbol:clpP1 "ATP-dependent Clp protea... 256 5.5e-22 1
TAIR|locus:2130449 - symbol:CLPR4 "CLP protease R subunit... 232 1.9e-19 1
GENEDB_PFALCIPARUM|PFC0310c - symbol:PFC0310c "ATP-depend... 217 1.7e-17 1
UNIPROTKB|O97252 - symbol:PFC0310c "ATP-dependent CLP pro... 217 1.7e-17 1
GENEDB_PFALCIPARUM|PF14_0348 - symbol:PF14_0348 "ATP-depe... 159 1.6e-10 1
UNIPROTKB|Q8IL98 - symbol:PF14_0348 "ATP-dependent Clp pr... 159 1.6e-10 1
TAIR|locus:2031070 - symbol:CLPR1 "CLP protease proteolyt... 152 8.4e-09 1
TIGR_CMR|DET_1086 - symbol:DET_1086 "ATP-dependent Clp pr... 113 0.00017 1
TIGR_CMR|SO_2964 - symbol:SO_2964 "ClpP protease family p... 112 0.00032 1
>TAIR|locus:2034625 [details] [associations]
symbol:CLP2 "CLP protease proteolytic subunit 2"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0009534 GO:GO:0010287
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022327 EMBL:AC025416
EMBL:AY057617 EMBL:AY062770 EMBL:AY081641 IPI:IPI00516669
PIR:T52454 RefSeq:NP_563907.1 UniGene:At.20902 PDB:1R97 PDBsum:1R97
ProteinModelPortal:Q9XJ36 SMR:Q9XJ36 IntAct:Q9XJ36 STRING:Q9XJ36
PaxDb:Q9XJ36 PRIDE:Q9XJ36 ProMEX:Q9XJ36 EnsemblPlants:AT1G12410.1
GeneID:837797 KEGG:ath:AT1G12410 GeneFarm:808 TAIR:At1g12410
InParanoid:Q9XJ36 OMA:IWNALYR PhylomeDB:Q9XJ36
ProtClustDB:CLSN2687781 Genevestigator:Q9XJ36 Uniprot:Q9XJ36
Length = 279
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 169/230 (73%), Positives = 196/230 (85%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRV+KSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ T
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNT 228
>TIGR_CMR|CHY_0325 [details] [associations]
symbol:CHY_0325 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:YP_359188.1
ProteinModelPortal:Q3AF96 SMR:Q3AF96 STRING:Q3AF96 GeneID:3726391
KEGG:chy:CHY_0325 PATRIC:21273821
BioCyc:CHYD246194:GJCN-326-MONOMER Uniprot:Q3AF96
Length = 195
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 69/157 (43%), Positives = 102/157 (64%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+W+ L ++R IFIG ID+ +N ++A ML+L++ D K ++
Sbjct: 6 PIVIEQTSRGERSY---DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIH 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R ++P +RI
Sbjct: 63 LYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR+RD + + L++ T
Sbjct: 123 IHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHT 159
>UNIPROTKB|P0C312 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0006508 GO:GO:0004252
EMBL:AY522331 GO:GO:0009535 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProteinModelPortal:P0C312
Gramene:P0C312 Genevestigator:P0C312 Uniprot:P0C312
Length = 216
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/162 (42%), Positives = 98/162 (60%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>UNIPROTKB|P0C313 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39946 "Oryza sativa Indica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:AY522329 GO:GO:0009535 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 ProtClustDB:CHL00028
RefSeq:YP_654230.1 ProteinModelPortal:P0C313 GeneID:4126873
Gramene:P0C313 Uniprot:P0C313
Length = 216
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/162 (42%), Positives = 98/162 (60%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>UNIPROTKB|P0C314 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0009536 GO:GO:0006508
GO:GO:0004252 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0009535 eggNOG:COG0740 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 MEROPS:S14.002 ProtClustDB:CHL00028
PIR:JQ0251 RefSeq:NP_039410.1 ProteinModelPortal:P0C314
STRING:P0C314 GeneID:3131474 KEGG:osa:3131474 Gramene:P0C314
Uniprot:P0C314
Length = 216
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/162 (42%), Positives = 98/162 (60%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>UNIPROTKB|Q6ENE9 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
GO:GO:0005524 GO:GO:0009536 GO:GO:0009570 GO:GO:0006508
GO:GO:0004252 EMBL:AP006728 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_052774.1 ProteinModelPortal:Q6ENE9 MEROPS:S14.002
GeneID:2885922 Gramene:Q6ENE9 ProtClustDB:CHL00028 Uniprot:Q6ENE9
Length = 216
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/162 (42%), Positives = 98/162 (60%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>TIGR_CMR|GSU_1792 [details] [associations]
symbol:GSU_1792 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE017180
GenomeReviews:AE017180_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_952842.1 ProteinModelPortal:Q74C82 SMR:Q74C82
GeneID:2686403 KEGG:gsu:GSU1792 PATRIC:22026431
BioCyc:GSUL243231:GH27-1812-MONOMER Uniprot:Q74C82
Length = 199
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/156 (41%), Positives = 102/156 (65%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G +D+ +N ++A ML+L++ D K +++
Sbjct: 4 PIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHL 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ +K+PV T CVG A + LL+GGEKG R ++ SRI +
Sbjct: 62 YINSPGGVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIMI 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G +GQA DI A E+L+++ + + L+ T
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENT 157
>TIGR_CMR|SO_1794 [details] [associations]
symbol:SO_1794 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:211586 "Shewanella oneidensis MR-1"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE014299
GenomeReviews:AE014299_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA ProtClustDB:PRK00277
RefSeq:NP_717403.1 ProteinModelPortal:Q8EG19 SMR:Q8EG19
GeneID:1169567 KEGG:son:SO_1794 PATRIC:23523211 Uniprot:Q8EG19
Length = 202
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 66/157 (42%), Positives = 100/157 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K ++
Sbjct: 13 PMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIF 69
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 70 LYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVM 129
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 130 IHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHT 166
>UNIPROTKB|Q16740 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008233 "peptidase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 GO:GO:0006508 GO:GO:0004252
GO:GO:0008233 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA BRENDA:3.4.21.92
MEROPS:S14.003 CTD:8192 HOVERGEN:HBG001689 OrthoDB:EOG46T32D
EMBL:Z50853 EMBL:AK311973 EMBL:BC002956 IPI:IPI00003870 PIR:S68421
RefSeq:NP_006003.1 UniGene:Hs.515092 PDB:1TG6 PDBsum:1TG6
ProteinModelPortal:Q16740 SMR:Q16740 DIP:DIP-50384N IntAct:Q16740
STRING:Q16740 PhosphoSite:Q16740 DMDM:3023512 PaxDb:Q16740
PeptideAtlas:Q16740 PRIDE:Q16740 DNASU:8192 Ensembl:ENST00000245816
GeneID:8192 KEGG:hsa:8192 UCSC:uc002mem.1 GeneCards:GC19P006315
HGNC:HGNC:2084 HPA:HPA010649 MIM:601119 neXtProt:NX_Q16740
PharmGKB:PA26610 InParanoid:Q16740 PhylomeDB:Q16740
EvolutionaryTrace:Q16740 GenomeRNAi:8192 NextBio:30886
ArrayExpress:Q16740 Bgee:Q16740 CleanEx:HS_CLPP
Genevestigator:Q16740 GermOnline:ENSG00000125656 Uniprot:Q16740
Length = 277
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 73/212 (34%), Positives = 123/212 (58%)
Query: 20 LFSGLKIQSPSVFGTGKPNLSAEFYGR--VHKSLYSGIRNDKPIRGRIAM-MPIGTPKVL 76
L G ++ S G P L+A F + ++L +G+ + + +P+ P V+
Sbjct: 6 LVGGARVASCRYPALG-PRLAAHFPAQRPPQRTLQNGLALQRCLHATATRALPL-IPIVV 63
Query: 77 YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYING 136
+T G G + D+++ L RER++ + ID+ ++ ++A +L+L S + K ++MYIN
Sbjct: 64 EQT-GRGERAY-DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINS 121
Query: 137 PGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA 196
PGG VT LAIYDTMQ + +P+ T CVG A + LLA G G R ++P SRI + P+
Sbjct: 122 PGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPS 181
Query: 197 GAARGQADDIRNEADELLRVRDYIFKELSRKT 228
G ARGQA DI +A+E+++++ ++ ++ T
Sbjct: 182 GGARGQATDIAIQAEEIMKLKKQLYNIYAKHT 213
>TIGR_CMR|CPS_3785 [details] [associations]
symbol:CPS_3785 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000083
GenomeReviews:CP000083_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 OMA:LVHPPQA RefSeq:YP_270452.1
ProteinModelPortal:Q47XL8 SMR:Q47XL8 STRING:Q47XL8 GeneID:3522356
KEGG:cps:CPS_3785 PATRIC:21470483
BioCyc:CPSY167879:GI48-3807-MONOMER Uniprot:Q47XL8
Length = 220
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 63/157 (40%), Positives = 99/157 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S K +Y
Sbjct: 29 PMVVEQTAKGERSY---DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIY 85
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K + T C+G A + FLL+GGEKG R +P +R+
Sbjct: 86 LYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVM 145
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA D A E+L ++D + K ++ T
Sbjct: 146 IHQPLGGFQGQASDFEIHAKEILFIKDKLNKLMAEHT 182
>UNIPROTKB|P63786 [details] [associations]
symbol:clpP "ATP-dependent Clp protease proteolytic
subunit" species:196620 "Staphylococcus aureus subsp. aureus MW2"
[GO:0042802 "identical protein binding" evidence=IPI]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 MEROPS:S14.001
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:BA000033 RefSeq:NP_645547.1 PDB:3ST9
PDB:3STA PDBsum:3ST9 PDBsum:3STA ProteinModelPortal:P63786
SMR:P63786 STRING:P63786 EnsemblBacteria:EBSTAT00000026409
GeneID:1002841 GenomeReviews:BA000033_GR KEGG:sam:MW0730
PATRIC:19568014 BioCyc:SAUR196620:GJ9Z-751-MONOMER BindingDB:P63786
EvolutionaryTrace:P63786 Uniprot:P63786
Length = 195
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 62/157 (39%), Positives = 98/157 (62%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A+ +L+ R+ + + LS +T
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERT 158
>TIGR_CMR|BA_5380 [details] [associations]
symbol:BA_5380 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
OMA:LVHPPQA ProtClustDB:PRK00277 RefSeq:NP_847553.1
RefSeq:YP_022039.1 RefSeq:YP_031239.1 ProteinModelPortal:Q81X63
SMR:Q81X63 IntAct:Q81X63 DNASU:1084924
EnsemblBacteria:EBBACT00000008224 EnsemblBacteria:EBBACT00000015397
EnsemblBacteria:EBBACT00000024106 GeneID:1084924 GeneID:2818633
GeneID:2848145 KEGG:ban:BA_5380 KEGG:bar:GBAA_5380 KEGG:bat:BAS5000
BioCyc:BANT260799:GJAJ-5075-MONOMER
BioCyc:BANT261594:GJ7F-5251-MONOMER Uniprot:Q81X63
Length = 193
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 63/157 (40%), Positives = 100/157 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +R+ + + L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRT 158
>UNIPROTKB|Q2KHU4 [details] [associations]
symbol:CLPP "Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005759 GO:GO:0006508 GO:GO:0004252 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:BC112880
IPI:IPI00700802 RefSeq:NP_001039879.1 UniGene:Bt.54443 HSSP:P0A6G7
ProteinModelPortal:Q2KHU4 SMR:Q2KHU4 STRING:Q2KHU4 MEROPS:S14.003
PRIDE:Q2KHU4 Ensembl:ENSBTAT00000019577 GeneID:535981
KEGG:bta:535981 CTD:8192 HOVERGEN:HBG001689 InParanoid:Q2KHU4
OrthoDB:EOG46T32D NextBio:20876866 Uniprot:Q2KHU4
Length = 272
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 71/193 (36%), Positives = 115/193 (59%)
Query: 37 PNLSAEFYG-RVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALY 95
P L+A F R ++ + RN R +P+ P V+ +T G G + D+++ L
Sbjct: 22 PRLAARFPPQRTPENRLAPQRNLHATAARA--LPL-IPIVVEQT-GRGERAY-DIYSRLL 76
Query: 96 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLK 155
RER++ + ID+ ++ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ +
Sbjct: 77 RERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYIL 136
Query: 156 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLR 215
+P+ T CVG A + LLA G G R ++P SRI + P+G ARGQA DI +A+E+++
Sbjct: 137 NPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMK 196
Query: 216 VRDYIFKELSRKT 228
++ ++ ++ T
Sbjct: 197 LKKQLYSIYAKHT 209
>TIGR_CMR|VC_1922 [details] [associations]
symbol:VC_1922 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 PIR:G82139 RefSeq:NP_231556.1
ProteinModelPortal:Q9KQS6 SMR:Q9KQS6 DNASU:2613551 GeneID:2613551
KEGG:vch:VC1922 PATRIC:20082888 Uniprot:Q9KQS6
Length = 200
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 62/157 (39%), Positives = 100/157 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L+L+S + K ++
Sbjct: 10 PMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG G R +P SR+
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A E+L +++ + + L+ T
Sbjct: 127 IHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHT 163
>RGD|1588583 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] NCBI:XP_001055676 REFSEQ:XM_001055676
Length = 272
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 66/177 (37%), Positives = 108/177 (61%)
Query: 57 NDKPIRGRI-----AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
+D P+R + P+ P V+ +T G G + D+++ L RER++ + ID+ +
Sbjct: 36 SDSPLRSNLHGTATRAFPL-IPIVVEQT-GRGERAY-DIYSRLLRERIVCVMGPIDDSVA 92
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ + +P+ T CVG A +
Sbjct: 93 SLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGS 152
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
LLA G G R ++P SRI + P+G ARGQA DI +A+E+++++ ++ ++ T
Sbjct: 153 LLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAKHT 209
>UNIPROTKB|F1SBT2 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562 PANTHER:PTHR10381
GeneTree:ENSGT00390000005830 OMA:LVHPPQA EMBL:CU929921
EMBL:AEMK01192585 EMBL:FP312741 Ensembl:ENSSSCT00000014789
Uniprot:F1SBT2
Length = 273
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 63/161 (39%), Positives = 103/161 (63%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
+P+ P V+ +T G G + D+++ L RER++ + ID+ ++ ++A +L+L S +
Sbjct: 52 LPL-IPIVVEQT-GRGERAY-DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++MYIN PGG VT LAIYDTMQ + +P+ T CVG A + LLA G G R ++P
Sbjct: 109 KPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+G ARGQA DI +A+E+++++ ++ ++ T
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHT 209
>MGI|MGI:1858213 [details] [associations]
symbol:Clpp "ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISA] [GO:0008233 "peptidase
activity" evidence=ISA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 MGI:MGI:1858213
GO:GO:0005739 GO:GO:0005524 GO:GO:0005759 GO:GO:0004252
GO:GO:0006515 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA BRENDA:3.4.21.92 MEROPS:S14.003 CTD:8192
HOVERGEN:HBG001689 OrthoDB:EOG46T32D EMBL:AJ005253 EMBL:AJ012249
EMBL:AJ012250 EMBL:AJ012251 EMBL:AJ012252 EMBL:AJ012253
EMBL:AK004024 EMBL:AK145765 EMBL:AK168053 EMBL:BC001998
IPI:IPI00133270 RefSeq:NP_059089.1 UniGene:Mm.287892
ProteinModelPortal:O88696 SMR:O88696 STRING:O88696
PhosphoSite:O88696 REPRODUCTION-2DPAGE:IPI00133270
REPRODUCTION-2DPAGE:O88696 PaxDb:O88696 PRIDE:O88696
Ensembl:ENSMUST00000002735 GeneID:53895 KEGG:mmu:53895
UCSC:uc008ddm.2 InParanoid:O88696 NextBio:310791 Bgee:O88696
Genevestigator:O88696 GermOnline:ENSMUSG00000002660 Uniprot:O88696
Length = 272
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 62/156 (39%), Positives = 100/156 (64%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L RER++ + ID+ ++ ++A +L+L S + K ++M
Sbjct: 56 PIVVEQT-GRGERAY-DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHM 113
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + +P+ T CVG A + LLA G G R ++P SRI +
Sbjct: 114 YINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMI 173
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G ARGQA DI +A+E+++++ ++ ++ T
Sbjct: 174 HQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHT 209
>ZFIN|ZDB-GENE-030131-7860 [details] [associations]
symbol:clpp "ClpP caseinolytic peptidase,
ATP-dependent, proteolytic subunit homolog (E. coli)" species:7955
"Danio rerio" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
ZFIN:ZDB-GENE-030131-7860 GO:GO:0006508 GO:GO:0004252 EMBL:BX649502
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HOVERGEN:HBG001689 IPI:IPI00481150
UniGene:Dr.76726 SMR:Q5PNM4 Ensembl:ENSDART00000006604
Ensembl:ENSDART00000131951 InParanoid:Q5PNM4 Uniprot:Q5PNM4
Length = 266
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 65/156 (41%), Positives = 100/156 (64%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L RER+I + ID+ ++ ++A +L+L S ++K ++M
Sbjct: 31 PIVVEQT-GRGERAY-DIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSESNNKPIHM 88
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + +P+ T CVG A + LLA G G R ++P +RI +
Sbjct: 89 YINSPGGVVTSGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNARIMV 148
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G ARGQA DI +A+E+L+++ I S+ T
Sbjct: 149 HQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHT 184
>UNIPROTKB|P0A6G7 [details] [associations]
symbol:clpP species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009266
"response to temperature stimulus" evidence=EXP] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005524 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0004252
GO:GO:0008236 GO:GO:0009408 EMBL:U82664 GO:GO:0006515
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 OMA:LVHPPQA
ProtClustDB:PRK00277 EMBL:J05534 PIR:B36575 RefSeq:NP_414971.1
RefSeq:YP_488729.1 PDB:1TYF PDB:1YG6 PDB:1YG8 PDB:2FZS PDB:3HLN
PDB:3MT6 PDBsum:1TYF PDBsum:1YG6 PDBsum:1YG8 PDBsum:2FZS
PDBsum:3HLN PDBsum:3MT6 ProteinModelPortal:P0A6G7 SMR:P0A6G7
DIP:DIP-31838N IntAct:P0A6G7 SWISS-2DPAGE:P0A6G7 PaxDb:P0A6G7
PRIDE:P0A6G7 EnsemblBacteria:EBESCT00000004586
EnsemblBacteria:EBESCT00000016552 EnsemblBacteria:EBESCT00000232597
GeneID:12931742 GeneID:945082 KEGG:ecj:Y75_p0425 KEGG:eco:b0437
PATRIC:32116027 EchoBASE:EB0156 EcoGene:EG10158
BioCyc:EcoCyc:EG10158-MONOMER BioCyc:ECOL316407:JW0427-MONOMER
BioCyc:MetaCyc:EG10158-MONOMER EvolutionaryTrace:P0A6G7
Genevestigator:P0A6G7 Uniprot:P0A6G7
Length = 207
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 66/167 (39%), Positives = 104/167 (62%)
Query: 52 YSGIRNDKPIRGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEF 110
YSG R++ +A++P+ V+ +T GE S+ D+++ L +ERVIF+ +++
Sbjct: 3 YSGERDN--FAPHMALVPM----VIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHM 53
Query: 111 SNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLA 170
+N I+A ML+L++ + K +Y+YIN PGG +T ++IYDTMQ +K V T C+G A +
Sbjct: 54 ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 171 GFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
FLL G KG R +P SR+ + P G +GQA DI A E+L+V+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160
>UNIPROTKB|E2QUV8 [details] [associations]
symbol:CLPP "ATP-dependent Clp protease proteolytic
subunit" species:9615 "Canis lupus familiaris" [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 InterPro:IPR023562
PANTHER:PTHR10381 GeneTree:ENSGT00390000005830 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029683 OMA:NEESAME NextBio:20897274
Uniprot:E2QUV8
Length = 301
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 59/148 (39%), Positives = 95/148 (64%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
G G + D+++ L RER++ + ID+ ++ ++A +L+L S + K ++MYIN PGG
Sbjct: 91 GRGERAY-DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGM 149
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT LAIYDTMQ + +P+ T CVG A + LLA G G R ++P SRI + P+G AR
Sbjct: 150 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 209
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI +A+E+++++ ++ ++ T
Sbjct: 210 GQATDIAIQAEEIMKLKKQLYGIYAKHT 237
>UNIPROTKB|Q6E6T0 [details] [associations]
symbol:Q6E6T0 "ATP-dependent Clp protease proteolytic
subunit" species:39947 "Oryza sativa Japonica Group" [GO:0009536
"plastid" evidence=IC] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574
GO:GO:0009536 GO:GO:0006508 GO:GO:0004252 GO:GO:0009535
HOGENOM:HOG000285833 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AY538587 ProteinModelPortal:Q6E6T0 STRING:Q6E6T0
Gramene:Q6E6T0 Uniprot:Q6E6T0
Length = 209
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 62/155 (40%), Positives = 91/155 (58%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++++I
Sbjct: 1 VPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFI 60
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG + +AI+DTMQ++ + C+G A +A F+L GGE R A P +RI L
Sbjct: 61 NSPGGWLISGMAIFDTMQTVTPDIYAICLGIAASMASFILLGGEPTKRIAFPHARIMLHQ 120
Query: 195 PAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 PASAYYRARTPEFLLEVEELHKVREMITRVYALRT 155
>TIGR_CMR|CJE_0185 [details] [associations]
symbol:CJE_0185 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:195099 "Campylobacter jejuni RM1221"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000025
GenomeReviews:CP000025_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ERDYWMD
RefSeq:YP_178209.1 ProteinModelPortal:Q5HWX6 SMR:Q5HWX6
STRING:Q5HWX6 GeneID:3230948 KEGG:cjr:CJE0185 PATRIC:20042079
BioCyc:CJEJ195099:GJC0-190-MONOMER Uniprot:Q5HWX6
Length = 194
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 62/157 (39%), Positives = 99/157 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ GE S+ D+++ L ++R+I + I +E + I+A +L+L++ D +K +Y
Sbjct: 4 PYVIEKSSRGERSY---DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +IYDTM +K V T C+G A + FLL+ G +G R A+P SRI
Sbjct: 61 LYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI +A E+LR++ + L++ T
Sbjct: 121 IHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNT 157
>FB|FBgn0032229 [details] [associations]
symbol:CG5045 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:AE014134 GO:GO:0006508 GO:GO:0004252 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GeneTree:ENSGT00390000005830
OMA:LVHPPQA MEROPS:S14.003 HSSP:P19245 EMBL:AY119497 EMBL:FM245207
RefSeq:NP_609388.1 UniGene:Dm.11171 SMR:Q9VKY3 MINT:MINT-974885
STRING:Q9VKY3 EnsemblMetazoa:FBtr0080000 EnsemblMetazoa:FBtr0332189
GeneID:34402 KEGG:dme:Dmel_CG5045 UCSC:CG5045-RA
FlyBase:FBgn0032229 InParanoid:Q9VKY3 OrthoDB:EOG4VHHP8
GenomeRNAi:34402 NextBio:788329 Uniprot:Q9VKY3
Length = 253
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 60/145 (41%), Positives = 96/145 (66%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L +ER+I + NI ++ S+ ++A +L+L S + +K +++
Sbjct: 31 PMVVEQT-GRGERAY-DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHL 88
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ +K P+ T CVG A + LLA G G R ++P +RI +
Sbjct: 89 YINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMI 148
Query: 193 DSPAGAARGQADDIRNEADELLRVR 217
P+G A+GQA DI A+E+++++
Sbjct: 149 HQPSGGAQGQATDILIHAEEIIKIK 173
>TIGR_CMR|NSE_0752 [details] [associations]
symbol:NSE_0752 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000237
GenomeReviews:CP000237_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_506627.1 ProteinModelPortal:Q2GD19 SMR:Q2GD19
STRING:Q2GD19 GeneID:3931620 KEGG:nse:NSE_0752 PATRIC:22681509
ProtClustDB:CLSK2527690 BioCyc:NSEN222891:GHFU-763-MONOMER
Uniprot:Q2GD19
Length = 201
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 65/163 (39%), Positives = 102/163 (62%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE ++ D+++ L +ERV+F+ I++ ++ I+A +L+L++ + K ++
Sbjct: 5 PMVVDQTPRGERAY---DIFSRLLKERVVFLTGPIEDGMASLIVAQLLFLEAENPDKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT L+IYDTMQ +K V T CVG A A +LA G +G R A+P SR+
Sbjct: 62 MYINSPGGVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEGKRFALPHSRVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYEGFK 234
+ P+G RGQA D+ E+L+++ I E+ +K E K
Sbjct: 122 VHQPSGGVRGQATDMEIHVKEILQLKRMI-NEIYQKHTGETIK 163
>TAIR|locus:2178282 [details] [associations]
symbol:NCLPP7 "nuclear-encoded CLP protease P7"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009840
"chloroplastic endopeptidase Clp complex" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
GO:GO:0006508 EMBL:AB006708 GO:GO:0004252 GO:GO:0050897
GO:GO:0009535 eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA EMBL:AK118523
EMBL:BT005261 IPI:IPI00533430 RefSeq:NP_568427.1 UniGene:At.31024
PDB:1R8V PDBsum:1R8V ProteinModelPortal:Q9FN42 SMR:Q9FN42
STRING:Q9FN42 MEROPS:S14.A02 PaxDb:Q9FN42 PRIDE:Q9FN42
EnsemblPlants:AT5G23140.1 GeneID:832378 KEGG:ath:AT5G23140
GeneFarm:805 TAIR:At5g23140 InParanoid:Q9FN42 PhylomeDB:Q9FN42
ProtClustDB:CLSN2917700 Genevestigator:Q9FN42 GO:GO:0009840
Uniprot:Q9FN42
Length = 241
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 60/147 (40%), Positives = 96/147 (65%)
Query: 73 PKVL-YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ + + GE ++ D+++ L +ER+I I I+++ S+ ++A +LYL+S + SK ++
Sbjct: 34 PMVIEHSSRGERAY---DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIH 90
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MY+N PGG VT LAIYDTMQ ++SP+ T C+G A +A LLA G KG R ++P + +
Sbjct: 91 MYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVM 150
Query: 192 LDSPAGAARGQADDIRNEADELLRVRD 218
+ P+G GQA DI +++RV D
Sbjct: 151 IHQPSGGYSGQAKDITIHTKQIVRVWD 177
>TIGR_CMR|ECH_0901 [details] [associations]
symbol:ECH_0901 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 TIGRFAMs:TIGR00493
ProtClustDB:PRK00277 RefSeq:YP_507695.1 ProteinModelPortal:Q2GFT8
SMR:Q2GFT8 STRING:Q2GFT8 GeneID:3928015 KEGG:ech:ECH_0901
PATRIC:20577202 OMA:RDPVEIF BioCyc:ECHA205920:GJNR-904-MONOMER
Uniprot:Q2GFT8
Length = 199
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 62/146 (42%), Positives = 94/146 (64%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L +ER+IFI I+++ ++ I+A +++L+S + K +
Sbjct: 5 PMVVEQTSRGERAY---DIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEIC 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT L+IYDTMQ +K V T C+G A + LLA GE G R A+P SRI
Sbjct: 62 MYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVR 217
+ P+G +GQA DI A E+L ++
Sbjct: 122 IHQPSGGFQGQATDIEIHAKEILDIK 147
>TIGR_CMR|APH_0970 [details] [associations]
symbol:APH_0970 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000235
GenomeReviews:CP000235_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 RefSeq:YP_505537.1
ProteinModelPortal:Q2GJB4 SMR:Q2GJB4 STRING:Q2GJB4 GeneID:3930516
KEGG:aph:APH_0970 PATRIC:20950656 OMA:ARMNELM
BioCyc:APHA212042:GHPM-982-MONOMER Uniprot:Q2GJB4
Length = 197
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/145 (41%), Positives = 91/145 (62%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L +ER+IF+ I++E ++ I+A +++L++ D K + M
Sbjct: 5 PMVVEQT-GRGERAY-DIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDISM 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT L+IYDTMQ +K V T C+G A + LL G G R A+P SR+ +
Sbjct: 63 YINSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRVMI 122
Query: 193 DSPAGAARGQADDIRNEADELLRVR 217
P+G RGQA DI A E+L ++
Sbjct: 123 HQPSGGFRGQATDIEIHAREILEIK 147
>TIGR_CMR|BA_2788 [details] [associations]
symbol:BA_2788 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 RefSeq:NP_845137.1 RefSeq:YP_019430.1
RefSeq:YP_028858.1 ProteinModelPortal:Q81PL4 SMR:Q81PL4
MEROPS:S14.001 DNASU:1086459 EnsemblBacteria:EBBACT00000008369
EnsemblBacteria:EBBACT00000015150 EnsemblBacteria:EBBACT00000020004
GeneID:1086459 GeneID:2817074 GeneID:2849926 KEGG:ban:BA_2788
KEGG:bar:GBAA_2788 KEGG:bat:BAS2599 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 OMA:DIVTICI ProtClustDB:CLSK916804
BioCyc:BANT260799:GJAJ-2663-MONOMER
BioCyc:BANT261594:GJ7F-2758-MONOMER InterPro:IPR023562
PANTHER:PTHR10381 TIGRFAMs:TIGR00493 Uniprot:Q81PL4
Length = 193
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 59/157 (37%), Positives = 95/157 (60%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R++ IG I+++ ++ ++A +L+L++ D K ++
Sbjct: 5 PYVVEQTKLGERSY---DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG T AI DTM +K V T C+GFA LL G KG R A+P S I
Sbjct: 62 LYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L+++ I K ++ KT
Sbjct: 122 IHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKT 158
>WB|WBGene00014172 [details] [associations]
symbol:clpp-1 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0006508 GO:GO:0010171
GO:GO:0040017 GO:GO:0040018 GO:GO:0004252 GO:GO:0040035
GO:GO:0030163 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
InterPro:IPR023562 PANTHER:PTHR10381 EMBL:Z49073 PIR:C88288
RefSeq:NP_001254239.1 RefSeq:NP_001254240.1 RefSeq:NP_001254241.1
ProteinModelPortal:Q27539 SMR:Q27539 STRING:Q27539 PaxDb:Q27539
EnsemblMetazoa:ZK970.2d GeneID:174594 KEGG:cel:CELE_ZK970.2
CTD:174594 WormBase:ZK970.2a WormBase:ZK970.2b WormBase:ZK970.2d
GeneTree:ENSGT00390000005830 InParanoid:Q27539 OMA:LVHPPQA
BRENDA:3.4.21.92 NextBio:884698 Uniprot:Q27539
Length = 221
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/148 (39%), Positives = 92/148 (62%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G P V+ G+G + D+++ L R+R++ + +D+ ++ ++A +L+L S K
Sbjct: 24 VGIPFVI-DNEGKGERTY-DIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKP 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
++MYIN PGG VT LAIYDT+Q + +PV T +G A + LL GEKG RSA+P SR
Sbjct: 82 IHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVR 217
I + P+G A+G DI A+E+ R++
Sbjct: 142 IMVHQPSGGAQGTCSDIVIRAEEITRLK 169
>TIGR_CMR|DET_0710 [details] [associations]
symbol:DET_0710 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:CP000027
GenomeReviews:CP000027_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
ProtClustDB:PRK00277 OMA:ERDYWMD RefSeq:YP_181451.1
ProteinModelPortal:Q3Z8J8 SMR:Q3Z8J8 STRING:Q3Z8J8 GeneID:3229949
KEGG:det:DET0710 PATRIC:21608483 BioCyc:DETH243164:GJNF-711-MONOMER
Uniprot:Q3Z8J8
Length = 200
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 56/140 (40%), Positives = 88/140 (62%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G I+++ +N ++A +L+LD D K + +YI+ PGG ++ LA+Y
Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLAMY 82
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T CVG A +A LL G KG R A+P + I + G A+GQA DI
Sbjct: 83 DTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEI 142
Query: 209 EADELLRVRDYIFKELSRKT 228
A E++R +D + L + T
Sbjct: 143 AAREIMRQQDILRNILVKHT 162
>TAIR|locus:2196120 [details] [associations]
symbol:CLPP5 "nuclear encoded CLP protease 5"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508
GO:GO:0009941 GO:GO:0004252 EMBL:AC022521 GO:GO:0009534
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022326 EMBL:AJ012278
EMBL:BT024859 EMBL:AY084394 IPI:IPI00546407 PIR:T52455
RefSeq:NP_563657.1 UniGene:At.21093 PDB:1R92 PDBsum:1R92
ProteinModelPortal:Q9S834 SMR:Q9S834 IntAct:Q9S834 STRING:Q9S834
MEROPS:S14.A01 PaxDb:Q9S834 PRIDE:Q9S834 ProMEX:Q9S834
EnsemblPlants:AT1G02560.1 GeneID:839433 KEGG:ath:AT1G02560
GeneFarm:806 TAIR:At1g02560 InParanoid:Q9S834 OMA:QGLGMVP
PhylomeDB:Q9S834 ProtClustDB:CLSN2687625 Genevestigator:Q9S834
Uniprot:Q9S834
Length = 298
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 54/121 (44%), Positives = 81/121 (66%)
Query: 94 LYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS 153
L++ R+I G +D++ +N I+A +LYLD+VD +K + MY+N PGG VT +AI+DTM+
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178
Query: 154 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 213
++ V T CVG A + FLL+ G KG R ++P SRI + P G A+G DI +A+E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238
Query: 214 L 214
L
Sbjct: 239 L 239
>UNIPROTKB|G4MLM6 [details] [associations]
symbol:MGG_06757 "ATP-dependent Clp protease proteolytic
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00444 InterPro:IPR001907
InterPro:IPR018215 PRINTS:PR00127 PROSITE:PS00381 PROSITE:PS00382
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:CM001231
MEROPS:S14.001 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:XP_003709471.1 ProteinModelPortal:G4MLM6
EnsemblFungi:MGG_06757T0 GeneID:2684930 KEGG:mgr:MGG_06757
Uniprot:G4MLM6
Length = 274
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 59/157 (37%), Positives = 88/157 (56%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
G P L G W+ D+++ L +ER++ + ID+ + A +L+L+ K +
Sbjct: 46 GVPMPLVTEVTAGGWRTSDIFSKLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPI 105
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V+ LAIYDTM + SPV T CVG A + LL GG G R A+P S+I
Sbjct: 106 TLYINSPGGQVSSGLAIYDTMNYISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQI 165
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G+ +GQA DI A ++ R+R I ++ R+
Sbjct: 166 MVHQPLGSTQGQASDIIIYAKQITRIRSQI-NDIMRR 201
>UNIPROTKB|P63783 [details] [associations]
symbol:clpP2 "ATP-dependent Clp protease proteolytic
subunit 2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006508 GO:GO:0004252 EMBL:BX842579 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
BRENDA:3.4.21.92 PIR:C70865 RefSeq:NP_216976.1 RefSeq:NP_337021.1
RefSeq:YP_006515897.1 ProteinModelPortal:P63783 SMR:P63783
IntAct:P63783 MEROPS:S14.009 PRIDE:P63783
EnsemblBacteria:EBMYCT00000002187 EnsemblBacteria:EBMYCT00000071970
GeneID:13319170 GeneID:888174 GeneID:925797 KEGG:mtc:MT2535
KEGG:mtu:Rv2460c KEGG:mtv:RVBD_2460c PATRIC:18127328
TubercuList:Rv2460c OMA:IQGQVSD ProtClustDB:PRK12553 Uniprot:P63783
Length = 214
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 56/140 (40%), Positives = 87/140 (62%)
Query: 91 WNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 150
+N L+ ER+IF+G +D+ +N I+A +L L+S+D + + MYIN PGG T +AIYDT
Sbjct: 33 YNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDT 92
Query: 151 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA--GAARGQADDIRN 208
MQ +++ + T C+G A A LLA G G R A+P +R+ + P+ G +GQ D+
Sbjct: 93 MQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEI 152
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+ R+R + L+R T
Sbjct: 153 QAAEIERMRTLMETTLARHT 172
>TIGR_CMR|CBU_0738 [details] [associations]
symbol:CBU_0738 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:227377 "Coxiella burnetii RSA 493"
[GO:0009368 "endopeptidase Clp complex" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 EMBL:AE016828
GenomeReviews:AE016828_GR MEROPS:S14.001 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
TIGRFAMs:TIGR00493 ProtClustDB:PRK00277 OMA:ARMNELM
RefSeq:NP_819764.1 PDB:3Q7H PDBsum:3Q7H ProteinModelPortal:Q83DJ2
SMR:Q83DJ2 GeneID:1208629 KEGG:cbu:CBU_0738 PATRIC:17930167
BioCyc:CBUR227377:GJ7S-735-MONOMER Uniprot:Q83DJ2
Length = 195
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 61/162 (37%), Positives = 96/162 (59%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE ++ D+++ L ++RVIF+ +++ +N +A ML+L+S +
Sbjct: 1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + +YIN PGG VT +AIYDTMQ +K V T C+G A LLAGG KG R +P
Sbjct: 58 NKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
S + + G +GQ DI+ A + RV D + + L++ T
Sbjct: 118 HSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHT 159
>TIGR_CMR|SPO_1003 [details] [associations]
symbol:SPO_1003 "ATP-dependent Clp protease, proteolytic
subunit ClpP" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009368
"endopeptidase Clp complex" evidence=ISS] HAMAP:MF_00444
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
GO:GO:0004252 MEROPS:S14.001 eggNOG:COG0740 HOGENOM:HOG000285833
KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381 OMA:LVHPPQA
ProtClustDB:PRK00277 RefSeq:YP_166255.1 ProteinModelPortal:Q5LUQ0
SMR:Q5LUQ0 GeneID:3193881 KEGG:sil:SPO1003 PATRIC:23375299
Uniprot:Q5LUQ0
Length = 209
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 61/150 (40%), Positives = 95/150 (63%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L +ER+IFI I + S+ I+A +L+L++ + +K +
Sbjct: 14 PMVVEQTSRGERAY---DIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPNKEIS 70
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT L+IYDTMQ +K T +G A + LLAGGEKG R ++P SRI
Sbjct: 71 IYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIM 130
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIF 221
+ P+G +GQA DI A E +++D ++
Sbjct: 131 VHQPSGGYQGQASDIMIHAAETQKLKDRLY 160
>TAIR|locus:2163538 [details] [associations]
symbol:CLPP4 "CLP protease P4" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009840 "chloroplastic endopeptidase Clp complex"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009532 "plastid stroma" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009658 GO:GO:0048510 GO:GO:0009535
eggNOG:COG0740 HOGENOM:HOG000285833 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022329 EMBL:AJ000930
EMBL:AB018113 EMBL:AY042832 EMBL:BT006321 EMBL:AY087717
IPI:IPI00548920 PIR:T52452 RefSeq:NP_568644.1 UniGene:At.387
UniGene:At.67124 PDB:1R91 PDBsum:1R91 ProteinModelPortal:Q94B60
SMR:Q94B60 IntAct:Q94B60 STRING:Q94B60 MEROPS:S14.010 PaxDb:Q94B60
PRIDE:Q94B60 EnsemblPlants:AT5G45390.1 GeneID:834575
KEGG:ath:AT5G45390 GeneFarm:801 TAIR:At5g45390 InParanoid:Q94B60
OMA:ERDYWMD PhylomeDB:Q94B60 ProtClustDB:CLSN2689933
Genevestigator:Q94B60 Uniprot:Q94B60
Length = 292
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 71/219 (32%), Positives = 118/219 (53%)
Query: 2 SVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPI 61
++SL+++L +PSL + +L S S S KPN Y + K + +R P
Sbjct: 3 TLSLSSSL-KPSLVSS-RLNSSSSASSSSF---PKPN---NLYLKPTKLISPPLRTTSPS 54
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
R A I + + G+ D+ L RER++F+G +ID+ ++ I++ +L L
Sbjct: 55 PLRFANASIEMSQT-QESAIRGAES--DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLL 111
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
D+ D K + ++IN PGG ++ T+AIYD +Q +++ V T +G A A +L G KG
Sbjct: 112 DAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGK 171
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
R AMP +RI + P G A GQA D+ +A E++ ++ +
Sbjct: 172 RFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNV 210
>TAIR|locus:2033344 [details] [associations]
symbol:CLPP3 "CLP protease proteolytic subunit 3"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC013288 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0009840 EMBL:AF032123 EMBL:AB022328 EMBL:AC079285
EMBL:AF370528 EMBL:AY072526 EMBL:AY087349 IPI:IPI00538968
PIR:T52041 PIR:T52453 RefSeq:NP_564880.1 UniGene:At.21167 PDB:1R90
PDBsum:1R90 ProteinModelPortal:Q9SXJ6 SMR:Q9SXJ6 IntAct:Q9SXJ6
STRING:Q9SXJ6 MEROPS:S14.A03 PaxDb:Q9SXJ6 PRIDE:Q9SXJ6
ProMEX:Q9SXJ6 EnsemblPlants:AT1G66670.1 GeneID:842985
KEGG:ath:AT1G66670 GeneFarm:804 TAIR:At1g66670 InParanoid:Q9SXJ6
OMA:NMLLRQR PhylomeDB:Q9SXJ6 ProtClustDB:CLSN2689048
Genevestigator:Q9SXJ6 Uniprot:Q9SXJ6
Length = 309
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 50/151 (33%), Positives = 91/151 (60%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S++ +D N L R+R++F+G +D+ ++ +++ +L LD+ D + + ++IN PGG +T
Sbjct: 80 SFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITA 139
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQA 203
+ IYD M+ K+ V T C+G A + FLLA G KG R MP S++ + P G A G+A
Sbjct: 140 GMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKA 199
Query: 204 DDIRNEADELL--RVR-DYIFKELSRKTDYE 231
++ E++ +++ + IF ++ K + E
Sbjct: 200 TEMSIRIREMMYHKIKLNKIFSRITGKPESE 230
>UNIPROTKB|P0A526 [details] [associations]
symbol:clpP1 "ATP-dependent Clp protease proteolytic
subunit 1" species:1773 "Mycobacterium tuberculosis" [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00381 PROSITE:PS00382 Pfam:PF00574 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006508 GO:GO:0004252 EMBL:BX842579
eggNOG:COG0740 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 PIR:D70865 RefSeq:NP_337022.1
RefSeq:YP_006515898.1 RefSeq:YP_177883.1 PDB:2C8T PDB:2CBY PDB:2CE3
PDBsum:2C8T PDBsum:2CBY PDBsum:2CE3 ProteinModelPortal:P0A526
SMR:P0A526 MEROPS:S14.008 PhosSite:P12071649 PRIDE:P0A526
EnsemblBacteria:EBMYCT00000001586 EnsemblBacteria:EBMYCT00000071224
GeneID:13319171 GeneID:888176 GeneID:925798 KEGG:mtc:MT2536
KEGG:mtu:Rv2461c KEGG:mtv:RVBD_2461c PATRIC:18127330
TubercuList:Rv2461c OMA:DPTRDIS ProtClustDB:PRK00277
EvolutionaryTrace:P0A526 Uniprot:P0A526
Length = 200
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 49/133 (36%), Positives = 80/133 (60%)
Query: 90 LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 149
++ L ER+IF+G +++E +N++ A +L L + D SK + +YIN PGG ++ +AIYD
Sbjct: 20 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 79
Query: 150 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNE 209
TM + T+ +G A + FLLA G KG R A+P +RI + P G G A DI +
Sbjct: 80 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 139
Query: 210 ADELLRVRDYIFK 222
A++ ++ +F+
Sbjct: 140 AEQFAVIKKEMFR 152
>TAIR|locus:2130449 [details] [associations]
symbol:CLPR4 "CLP protease R subunit 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0000302 "response to reactive oxygen species" evidence=IMP]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004252 GO:GO:0000302
GO:GO:0010468 EMBL:Z97342 EMBL:AL161545 eggNOG:COG0740
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
EMBL:AK117499 EMBL:AY081275 EMBL:BT000050 EMBL:AY087492
IPI:IPI00525806 PIR:G71438 RefSeq:NP_567521.1 UniGene:At.19677
PDB:1R99 PDBsum:1R99 ProteinModelPortal:Q8LB10 SMR:Q8LB10
IntAct:Q8LB10 STRING:Q8LB10 PaxDb:Q8LB10 PRIDE:Q8LB10 ProMEX:Q8LB10
EnsemblPlants:AT4G17040.1 GeneID:827412 KEGG:ath:AT4G17040
GeneFarm:809 TAIR:At4g17040 InParanoid:Q8LB10 OMA:YFSPSEA
PhylomeDB:Q8LB10 ProtClustDB:CLSN2689477 Genevestigator:Q8LB10
Uniprot:Q8LB10
Length = 305
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 60/179 (33%), Positives = 89/179 (49%)
Query: 57 NDKPIRGRIAMM-PIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQIL 115
+ KP RG + M+ P + P DL + L++ R++++G ++ + IL
Sbjct: 79 SSKPKRGVVTMVIPFSKGSAHEQPPP-------DLASYLFKNRIVYLGMSLVPSVTELIL 131
Query: 116 ATMLYLDSVDDSKRVYMYINGPG--------GDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
A LYL D+ K +Y+YIN G G T AIYD M +K P+ T CVG A+
Sbjct: 132 AEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAW 191
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
A LL G KGNRSA+P S I + P +GQA D+ E+ ++ + K S+
Sbjct: 192 GEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSK 250
>GENEDB_PFALCIPARUM|PFC0310c [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease,
putative" species:5833 "Plasmodium falciparum" [GO:0030163 "protein
catabolic process" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 GO:GO:0030163 EMBL:AL844502 KO:K01358
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0020011
RefSeq:XP_001351149.1 PDB:2F6I PDBsum:2F6I
ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 217 (81.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 42/135 (31%), Positives = 80/135 (59%)
Query: 95 YRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSL 154
+++R+I++ I+++ ++++++ +LYLD+++ + + +YIN PGG + LAI D +
Sbjct: 192 FKKRIIYLTDEINKKTADELISQLLYLDNINHND-IKIYINSPGGSINEGLAILDIFNYI 250
Query: 155 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELL 214
KS + T G +A +LA G+KG R ++P RI + P G A G DI + E+L
Sbjct: 251 KSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEIL 310
Query: 215 RVRDYIFKELSRKTD 229
++ ++ LS T+
Sbjct: 311 YLKKLLYHYLSSFTN 325
>UNIPROTKB|O97252 [details] [associations]
symbol:PFC0310c "ATP-dependent CLP protease, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=ISS]
HAMAP:MF_00444 InterPro:IPR001907 InterPro:IPR018215 PRINTS:PR00127
PROSITE:PS00382 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
GO:GO:0030163 EMBL:AL844502 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001351149.1 PDB:2F6I
PDBsum:2F6I ProteinModelPortal:O97252 SMR:O97252 MEROPS:S14.011
EnsemblProtists:PFC0310c:mRNA GeneID:814391 KEGG:pfa:PFC0310c
EuPathDB:PlasmoDB:PF3D7_0307400 ProtClustDB:CLSZ2500462
EvolutionaryTrace:O97252 Uniprot:O97252
Length = 370
Score = 217 (81.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 42/135 (31%), Positives = 80/135 (59%)
Query: 95 YRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSL 154
+++R+I++ I+++ ++++++ +LYLD+++ + + +YIN PGG + LAI D +
Sbjct: 192 FKKRIIYLTDEINKKTADELISQLLYLDNINHND-IKIYINSPGGSINEGLAILDIFNYI 250
Query: 155 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELL 214
KS + T G +A +LA G+KG R ++P RI + P G A G DI + E+L
Sbjct: 251 KSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEIL 310
Query: 215 RVRDYIFKELSRKTD 229
++ ++ LS T+
Sbjct: 311 YLKKLLYHYLSSFTN 325
>GENEDB_PFALCIPARUM|PF14_0348 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease
proteolytic subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001907
PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508 GO:GO:0004252
EMBL:AE014187 HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562
PANTHER:PTHR10381 GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2
PDBsum:4HNK HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 43/165 (26%), Positives = 81/165 (49%)
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
LY + E +++ + L +R+IF+ I S QI++ +LYL+ K +++YIN
Sbjct: 46 LYYSYNEHHKYNINIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYIN 105
Query: 136 GPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
G +T ++I D + + S V T+C+G AY +A L + G+KG R ++
Sbjct: 106 STGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSL 165
Query: 186 PLSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTD 229
S L+ QA +I + E++ + + + +S+ T+
Sbjct: 166 KNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTE 210
>UNIPROTKB|Q8IL98 [details] [associations]
symbol:PF14_0348 "ATP-dependent Clp protease proteolytic
subunit" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001907 PRINTS:PR00127
Pfam:PF00574 GO:GO:0006508 GO:GO:0004252 EMBL:AE014187
HOGENOM:HOG000285833 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
GO:GO:0020011 RefSeq:XP_001348522.1 PDBsum:4GM2 PDBsum:4HNK
HSSP:P19245 ProteinModelPortal:Q8IL98
EnsemblProtists:PF14_0348:mRNA GeneID:811930 KEGG:pfa:PF14_0348
EuPathDB:PlasmoDB:PF3D7_1436800 OMA:GDSAVMR ProtClustDB:CLSZ2847446
Uniprot:Q8IL98
Length = 244
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 43/165 (26%), Positives = 81/165 (49%)
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
LY + E +++ + L +R+IF+ I S QI++ +LYL+ K +++YIN
Sbjct: 46 LYYSYNEHHKYNINIPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYIN 105
Query: 136 GPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
G +T ++I D + + S V T+C+G AY +A L + G+KG R ++
Sbjct: 106 STGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSL 165
Query: 186 PLSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTD 229
S L+ QA +I + E++ + + + +S+ T+
Sbjct: 166 KNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTE 210
>TAIR|locus:2031070 [details] [associations]
symbol:CLPR1 "CLP protease proteolytic subunit 1"
species:3702 "Arabidopsis thaliana" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009840 "chloroplastic
endopeptidase Clp complex" evidence=IDA] [GO:0009532 "plastid
stroma" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0009941
GO:GO:0004252 GO:GO:0009534 EMBL:AC015445 eggNOG:COG0740
InterPro:IPR023562 PANTHER:PTHR10381 GO:GO:0009840 EMBL:AB022330
EMBL:AY045677 EMBL:BT000572 IPI:IPI00529610 PIR:T52451
RefSeq:NP_564560.1 UniGene:At.23793 UniGene:At.75198 PDB:1R96
PDBsum:1R96 ProteinModelPortal:Q9XJ35 SMR:Q9XJ35 IntAct:Q9XJ35
STRING:Q9XJ35 PaxDb:Q9XJ35 PRIDE:Q9XJ35 EnsemblPlants:AT1G49970.1
GeneID:841420 KEGG:ath:AT1G49970 GeneFarm:810 TAIR:At1g49970
HOGENOM:HOG000006365 InParanoid:Q9XJ35 OMA:AIDMWIK PhylomeDB:Q9XJ35
ProtClustDB:CLSN2688619 Genevestigator:Q9XJ35 Uniprot:Q9XJ35
Length = 387
Score = 152 (58.6 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 48/150 (32%), Positives = 73/150 (48%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG---------G 139
DL + L R+ ++G I + ++A ++LD + +K +Y+YIN PG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 140 DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGA 198
T AI DT+ KS V T G A+ A LL+ G+KG R+ P S L P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 199 ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ G A D+ +A EL +Y + L++ T
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGT 320
>TIGR_CMR|DET_1086 [details] [associations]
symbol:DET_1086 "ATP-dependent Clp protease, proteolytic
subunit ClpP, putative" species:243164 "Dehalococcoides ethenogenes
195" [GO:0009368 "endopeptidase Clp complex" evidence=ISS]
InterPro:IPR001907 PRINTS:PR00127 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0740 KO:K01358 InterPro:IPR023562 PANTHER:PTHR10381
RefSeq:YP_181801.1 ProteinModelPortal:Q3Z7J8 STRING:Q3Z7J8
GeneID:3229625 KEGG:det:DET1086 PATRIC:21609213
HOGENOM:HOG000232515 OMA:GDITVWI ProtClustDB:CLSK925866
BioCyc:DETH243164:GJNF-1087-MONOMER Uniprot:Q3Z7J8
Length = 242
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 34/148 (22%), Positives = 64/148 (43%)
Query: 85 WQWV--DLWNALYRERVIFI-GQNIDEEFSNQILATMLYLDSVDDSK-RVYMYINGPGGD 140
W WV + ++ +R +++ G+ DE + + L+ D + + ++IN PGGD
Sbjct: 6 WNWVRNEEPDSFGSDRTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGD 65
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V IY+ + V A A + G K S P++ + + +PA A
Sbjct: 66 VFAAAQIYNMLMDYPHDVTVKIDALAASAASVIAMAGTKVCMS--PVAMMMIHNPATIAI 123
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
G ++++ D L V++ I K+
Sbjct: 124 GDTEEMQKAIDMLNEVKESIMNAYEIKS 151
>TIGR_CMR|SO_2964 [details] [associations]
symbol:SO_2964 "ClpP protease family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001907 InterPro:IPR018215
PRINTS:PR00127 PROSITE:PS00381 Pfam:PF00574 GO:GO:0006508
GO:GO:0004252 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR023562 PANTHER:PTHR10381 RefSeq:NP_718533.1
ProteinModelPortal:Q8ED07 GeneID:1170652 KEGG:son:SO_2964
PATRIC:23525568 HOGENOM:HOG000138775 OMA:NSPGGDF
ProtClustDB:CLSK865009 Uniprot:Q8ED07
Length = 284
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
L S+ + K V +YIN PGGD+ +AIY+ ++ K V T +G A A + GE
Sbjct: 63 LRSIGNEKDVTVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDD 122
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADEL 213
R + + + + A G +RN AD++
Sbjct: 123 ARFVASSAFLMIHNCWVFAIGNRHALRNIADDM 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 0.00087 113 3 11 22 0.42 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 610 (65 KB)
Total size of DFA: 185 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.43u 0.15s 19.58t Elapsed: 00:00:01
Total cpu time: 19.43u 0.15s 19.58t Elapsed: 00:00:01
Start: Sat May 11 04:30:17 2013 End: Sat May 11 04:30:18 2013