BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026750
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224125072|ref|XP_002329885.1| predicted protein [Populus trichocarpa]
gi|222871122|gb|EEF08253.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/228 (79%), Positives = 208/228 (91%)
Query: 1 MSVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKP 60
M+ SLNANL QPSLSC KL+SGLK+Q PS++ TG+PNL+AEFYG+V+KSL G RN KP
Sbjct: 1 MASSLNANLSQPSLSCGAKLYSGLKLQFPSLYATGRPNLTAEFYGKVNKSLQCGTRNHKP 60
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
R + MMPIGTP+V YRTPGEG+WQWVD+WNALYRER++FIGQNIDEEFSNQILATMLY
Sbjct: 61 TRAAVKMMPIGTPRVPYRTPGEGTWQWVDIWNALYRERILFIGQNIDEEFSNQILATMLY 120
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++DDSKR+Y+YINGPGGD+TP+LAIYDTMQSLKSPVGTHCVGFAY+LAGFLL GEKG
Sbjct: 121 LDTIDDSKRMYLYINGPGGDLTPSLAIYDTMQSLKSPVGTHCVGFAYNLAGFLLTAGEKG 180
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
NRSAMPLSRIAL SPAGAARGQADDI NEA+ELLR+RDY++ ELS+KT
Sbjct: 181 NRSAMPLSRIALQSPAGAARGQADDICNEANELLRIRDYLYNELSKKT 228
>gi|255537123|ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223549527|gb|EEF51015.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 279
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/228 (78%), Positives = 206/228 (90%)
Query: 1 MSVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKP 60
M+ LN NL QPSLSC KL+SGLK+QSPS++ TG+PNL+AEFYGRV+KSL G R+
Sbjct: 1 MAFCLNTNLNQPSLSCGTKLYSGLKLQSPSLYATGRPNLTAEFYGRVNKSLQCGTRSHSA 60
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
I + MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY
Sbjct: 61 IHAGVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++DD+KR+Y YINGPGGD+TPTLAIYDTMQSLKSPVGTHCVGFAY+LAGF+LA GEKG
Sbjct: 121 LDTIDDNKRIYFYINGPGGDLTPTLAIYDTMQSLKSPVGTHCVGFAYNLAGFILAAGEKG 180
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
NRSAMPLSRIAL SPAGAARGQADDIRNEA+ELLR++DY++ EL++KT
Sbjct: 181 NRSAMPLSRIALQSPAGAARGQADDIRNEANELLRIKDYLYNELAKKT 228
>gi|225470285|ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic [Vitis vinifera]
gi|147794105|emb|CAN62361.1| hypothetical protein VITISV_031921 [Vitis vinifera]
gi|297742668|emb|CBI34817.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 362 bits (928), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 192/218 (88%)
Query: 11 QPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPI 70
QP LSC KLFSGLK+QS S FGTGKPNL+ EF+ +VHKS+ S + K R R+ MMPI
Sbjct: 23 QPPLSCATKLFSGLKLQSASTFGTGKPNLTVEFFNKVHKSVQSRTSDSKSTRARVRMMPI 82
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GTP+V YRTPGEG+WQWVDLWNALYRERVI+IGQ+IDEEFSNQ+LATMLYLDS++ SKR+
Sbjct: 83 GTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDEEFSNQLLATMLYLDSIESSKRM 142
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+ YIN PGGD+TP+LAIYDTMQSLKSPVGT+C+GFAY+LA FLLA GEKGNR AMPLSRI
Sbjct: 143 FFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYNLATFLLAAGEKGNRLAMPLSRI 202
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
AL SPAGAARGQADDIRNEA+ELLR+RDY+F EL+ KT
Sbjct: 203 ALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKT 240
>gi|297844106|ref|XP_002889934.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
gi|297335776|gb|EFH66193.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/230 (73%), Positives = 196/230 (85%), Gaps = 4/230 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRVHKSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFITSGYQNLNKEFYGRVHKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ T
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNT 228
>gi|356563278|ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Glycine max]
Length = 285
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 188/217 (86%)
Query: 12 PSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIG 71
P+ S KL+SGLK+Q+ S F +PN++AEFYG+VH +L+ N P RI MMPIG
Sbjct: 18 PTSSVATKLYSGLKLQAASSFRAARPNVTAEFYGKVHNTLHCRYANHNPSMARIRMMPIG 77
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
TPKV YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDS+D+SK++Y
Sbjct: 78 TPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIDNSKKLY 137
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYINGPGGD+TP++AIYDTMQSL+SPV THCVG+AY LA FLLA GEK NRSAMPLSR+A
Sbjct: 138 MYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKSNRSAMPLSRVA 197
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L SPAGAARGQADDI+NEA+ELLR+RDY+F ELS+KT
Sbjct: 198 LTSPAGAARGQADDIQNEANELLRIRDYLFNELSKKT 234
>gi|18391391|ref|NP_563907.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75315329|sp|Q9XJ36.1|CLPR2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 2, chloroplastic; Short=ClpR2;
Short=nClpP2; Flags: Precursor
gi|8778627|gb|AAF79635.1|AC025416_9 F5O11.13 [Arabidopsis thaliana]
gi|5360589|dbj|BAA82066.1| nClpP2 [Arabidopsis thaliana]
gi|17065388|gb|AAL32848.1| similar to nClpP2 [Arabidopsis thaliana]
gi|20148625|gb|AAM10203.1| similar to nClpP2 dbj|BAA82066.1 [Arabidopsis thaliana]
gi|332190755|gb|AEE28876.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 279
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 169/230 (73%), Positives = 196/230 (85%), Gaps = 4/230 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRV+KSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ T
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNT 228
>gi|356514168|ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Glycine max]
Length = 312
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 160/214 (74%), Positives = 187/214 (87%)
Query: 15 SCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPK 74
S KL+SGLK+Q+ S FG KPN++AEFYG+VH +L+ N RI MMPIGTPK
Sbjct: 48 SVATKLYSGLKLQAASPFGAAKPNVTAEFYGKVHNTLHCRYANHNTSMARIRMMPIGTPK 107
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDS+++SK++YMYI
Sbjct: 108 VPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENSKKLYMYI 167
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
NGPGGD+TP++AIYDTMQSL+SPV THCVG+AY LA FLLA GEKGNRSAMPLSR+AL S
Sbjct: 168 NGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKGNRSAMPLSRVALTS 227
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
PAGAARGQADDI+NEA+ELLR+RDY+F EL++KT
Sbjct: 228 PAGAARGQADDIQNEANELLRIRDYLFNELAQKT 261
>gi|16209712|gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]
Length = 279
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/230 (73%), Positives = 195/230 (84%), Gaps = 4/230 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRV+KSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++D S+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDGSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ T
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNT 228
>gi|449459668|ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Cucumis sativus]
gi|449523577|ref|XP_004168800.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Cucumis sativus]
Length = 285
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 189/218 (86%)
Query: 11 QPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPI 70
QPSLS K+++GLK QS S FG KPN++AEFYG+VHKSL + N K R + MMPI
Sbjct: 17 QPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRTNNKKAARAQFQMMPI 76
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GTP+V Y+TPGEG WQWVDLWNALYRERVIFIG +DEEFSNQILATMLYLDSV+ SK++
Sbjct: 77 GTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKL 136
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YINGPGGD+TPTLA+YDTMQSLKSP+ THC+G AY++A FLLA GEKGNRSAMPLSRI
Sbjct: 137 YIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRI 196
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
AL SPAG+ARG+ADDI+NEA++LL++RDY+F ELS+KT
Sbjct: 197 ALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKT 234
>gi|357477011|ref|XP_003608791.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355509846|gb|AES90988.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 341
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 149/222 (67%), Positives = 185/222 (83%), Gaps = 3/222 (1%)
Query: 9 LYQPSLSCNLKLFSGLKIQSPSVFGTGK--PNLSAEFYGRVHKSLYSGIRNDKPIRGRIA 66
+Y P S + K++SGLK+QS FG N++A+F+G+V+K L N KP+R +I
Sbjct: 70 VYSPP-SVSTKIYSGLKLQSSRTFGASSISSNVNAQFFGKVNKVLNFRYANQKPVRAQIR 128
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQ IDEE SNQILAT+LYLDSVD+
Sbjct: 129 MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQEIDEELSNQILATLLYLDSVDN 188
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK++Y+YINGPGGD+TP +++YDTMQSL++P+ THC+G AY LA FLLA GEKGNR+AMP
Sbjct: 189 SKKLYLYINGPGGDLTPCMSLYDTMQSLQTPICTHCIGQAYGLAAFLLAAGEKGNRTAMP 248
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L+RI + SPAGAARG+ADDI+NEA ELLR+RDY+F EL+ KT
Sbjct: 249 LARIVIQSPAGAARGRADDIQNEAAELLRIRDYLFTELANKT 290
>gi|357110855|ref|XP_003557231.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Brachypodium distachyon]
Length = 296
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 181/221 (81%), Gaps = 5/221 (2%)
Query: 13 SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMP 69
SL K+F GLK Q+ G+ + PN++A FY V++ + G+ N + R RI+MMP
Sbjct: 25 SLCVGTKVFVGLKAQTK--LGSSESSCPNVNARFYTAVNRRVSLGLSNKRATRARISMMP 82
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+GTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDSVDDSK+
Sbjct: 83 VGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSVDDSKK 142
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA G+KG+R+ MPL R
Sbjct: 143 IILYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGQKGSRTGMPLCR 202
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDY 230
I+L SPAGAARGQADDI NEA+EL R+R+Y++ +LS T +
Sbjct: 203 ISLQSPAGAARGQADDIENEANELNRIRNYLYGKLSEHTGH 243
>gi|115466260|ref|NP_001056729.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|55296987|dbj|BAD68462.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|113594769|dbj|BAF18643.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|215692474|dbj|BAG87894.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704676|dbj|BAG94304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737501|dbj|BAG96631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197521|gb|EEC79948.1| hypothetical protein OsI_21540 [Oryza sativa Indica Group]
gi|222634917|gb|EEE65049.1| hypothetical protein OsJ_20046 [Oryza sativa Japonica Group]
Length = 297
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 180/215 (83%), Gaps = 5/215 (2%)
Query: 19 KLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKV 75
K+F GLK Q+ G+ + PN++A FY V++ + G+ N + R RI+MMP+GTP+V
Sbjct: 32 KVFVGLKAQTK--LGSSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRV 89
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
YRTPGEG+WQW+D+WNALYRER+IFIG +IDEEFSNQ+LA+MLYLDSVD++K++ +YIN
Sbjct: 90 PYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYIN 149
Query: 136 GPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP 195
GPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL RI+L SP
Sbjct: 150 GPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSP 209
Query: 196 AGAARGQADDIRNEADELLRVRDYIFKELSRKTDY 230
AGAARGQADDI NEA+EL+R+++Y++ +LS T +
Sbjct: 210 AGAARGQADDIENEANELIRIKNYLYSKLSEHTGH 244
>gi|195612324|gb|ACG27992.1| ATP-dependent Clp protease proteolytic subunit 2 [Zea mays]
gi|238007600|gb|ACR34835.1| unknown [Zea mays]
gi|413953314|gb|AFW85963.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 292
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 181/221 (81%), Gaps = 5/221 (2%)
Query: 13 SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMP 69
SLS K+F GL+ Q+ G+ + PN+SA F+ V++ + + K R RI+MMP
Sbjct: 21 SLSVGTKVFVGLRAQTK--LGSSESSCPNVSAGFHTAVNRRISLRLSKKKATRARISMMP 78
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
IGTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDS+D+SK+
Sbjct: 79 IGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDNSKK 138
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL R
Sbjct: 139 IMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCR 198
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDY 230
I+L SPAGAARGQADDI NEA+EL+R+++Y++ +L+ T +
Sbjct: 199 ISLQSPAGAARGQADDIENEANELIRIKNYLYGKLAGHTGH 239
>gi|162463534|ref|NP_001106056.1| LOC100125655 [Zea mays]
gi|150256106|gb|ABR68025.1| PL5L15 [Zea mays]
Length = 292
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 180/221 (81%), Gaps = 5/221 (2%)
Query: 13 SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMP 69
SLS K+F GL+ Q+ G+ + PN+SA F+ V++ + + K R RI+ MP
Sbjct: 21 SLSVGTKVFVGLRAQTK--LGSSESSCPNVSAGFHTAVNRRISLRLSKKKATRARISTMP 78
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
IGTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDS+D+SK+
Sbjct: 79 IGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDNSKK 138
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL R
Sbjct: 139 IMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCR 198
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDY 230
I+L SPAGAARGQADDI NEA+EL+R++DY++ +L+ T +
Sbjct: 199 ISLQSPAGAARGQADDIENEANELIRIKDYLYGKLAGHTGH 239
>gi|326499826|dbj|BAJ90748.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 179/215 (83%), Gaps = 5/215 (2%)
Query: 19 KLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKV 75
K+F GLK Q+ G+ + PN++A FY V++ + G+ N + R RI+MMP+GTP+V
Sbjct: 4 KVFVGLKAQTR--LGSSESSCPNVNARFYTAVNRRVSLGLSNKRATRARISMMPVGTPRV 61
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDSVDD+K++ +YIN
Sbjct: 62 PYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSVDDTKKILLYIN 121
Query: 136 GPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP 195
GPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA G+KG+R+ MPL R++L SP
Sbjct: 122 GPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGQKGSRTGMPLCRVSLQSP 181
Query: 196 AGAARGQADDIRNEADELLRVRDYIFKELSRKTDY 230
AGAARGQADDI NE++EL R+++Y++ +L+ T +
Sbjct: 182 AGAARGQADDIENESNELNRIKNYLYGKLAEHTGH 216
>gi|116785923|gb|ABK23909.1| unknown [Picea sitchensis]
gi|148907936|gb|ABR17088.1| unknown [Picea sitchensis]
Length = 293
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/223 (60%), Positives = 171/223 (76%), Gaps = 2/223 (0%)
Query: 7 ANLYQPSLSCNLKLFSGLKIQSPS-VFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRI 65
A L P+ C++ + GL+ Q P +F + +LS + +V +SL S + R ++
Sbjct: 20 ATLPSPT-RCSINAYVGLRPQCPQGLFRNERSDLSIALHEKVQQSLISRLGTKGTCRSQV 78
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMPIGTP+V YRTPGEGSWQWVD+WNALYRER+I+I Q IDEEFSNQILATMLYLDSVD
Sbjct: 79 TMMPIGTPRVPYRTPGEGSWQWVDIWNALYRERIIYIAQYIDEEFSNQILATMLYLDSVD 138
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
SK + +YINGPGGDVTP +++YDTMQSLKSP+GT C+G+A++LAGFLLA G KG R A
Sbjct: 139 SSKDITLYINGPGGDVTPCMSMYDTMQSLKSPIGTLCLGYAFNLAGFLLAAGAKGKRGAS 198
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P SR+ L S AG+ARGQADDI NEA EL+R R+Y+F++L+R T
Sbjct: 199 PSSRVVLQSVAGSARGQADDIENEAKELIRTRNYMFEQLARNT 241
>gi|357477013|ref|XP_003608792.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355509847|gb|AES90989.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 213
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 125/162 (77%), Positives = 148/162 (91%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQ IDEE SNQILAT+LYLDSVD+
Sbjct: 1 MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQEIDEELSNQILATLLYLDSVDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK++Y+YINGPGGD+TP +++YDTMQSL++P+ THC+G AY LA FLLA GEKGNR+AMP
Sbjct: 61 SKKLYLYINGPGGDLTPCMSLYDTMQSLQTPICTHCIGQAYGLAAFLLAAGEKGNRTAMP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L+RI + SPAGAARG+ADDI+NEA ELLR+RDY+F EL+ KT
Sbjct: 121 LARIVIQSPAGAARGRADDIQNEAAELLRIRDYLFTELANKT 162
>gi|168041627|ref|XP_001773292.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675334|gb|EDQ61830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 220
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 146/168 (86%), Gaps = 1/168 (0%)
Query: 62 RGRIAMM-PIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
RG++ MM PIGTPKV YRTPGEG WQWVD+WN LYRER+IF+GQ IDEEF NQ++ATMLY
Sbjct: 1 RGKVTMMAPIGTPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLY 60
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LDSVD+SK +++YIN PGGD+TP +AIYDTM+S+KSPVGT +G+AY+ AG LLA G KG
Sbjct: 61 LDSVDNSKPMHLYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKG 120
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R AMPL+R+AL SPAGAARGQADDI NEA EL RVR+Y+++++S+KT
Sbjct: 121 MRVAMPLTRVALMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKT 168
>gi|168036370|ref|XP_001770680.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678041|gb|EDQ64504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/162 (72%), Positives = 142/162 (87%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M PIGTPKV YRTPGEG WQWVD+WN LYRER+IF+GQ IDEEF NQ++ATMLYLDSVD+
Sbjct: 1 MAPIGTPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLYLDSVDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK +Y+YIN PGGD+TP +AIYDTM+S+KSPVGT +G+AY+ AG LLA G KG R+AMP
Sbjct: 61 SKPMYLYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKGMRTAMP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L+R+AL SPAGAARGQADDI NEA EL RVR+Y+++++S+KT
Sbjct: 121 LTRVALMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKT 162
>gi|302804775|ref|XP_002984139.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
gi|300147988|gb|EFJ14649.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
Length = 274
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 151/184 (82%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
V +S + R R ++ MMPIGTPKV YRTPGEG+WQ+VD+WN LYRER+IFIGQ+I
Sbjct: 41 VSRSANARPRRAGICRAQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHI 100
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
DEEF NQ+LATMLYLDSVD SK ++ Y++ PGGD+TP++AIYDTM S+KS +GT +G+A
Sbjct: 101 DEEFGNQVLATMLYLDSVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYA 160
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
Y++AGFLLA GEKG R++MPL+RIA+ P GAARG+A DI+NEA EL RVRDY+FK+L+
Sbjct: 161 YNIAGFLLAAGEKGMRTSMPLTRIAIQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAV 220
Query: 227 KTDY 230
KT +
Sbjct: 221 KTGH 224
>gi|302780906|ref|XP_002972227.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
gi|300159694|gb|EFJ26313.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
Length = 271
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/168 (68%), Positives = 145/168 (86%)
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
R ++ MMPIGTPKV YRTPGEG+WQ+VD+WN LYRER+IFIGQ+IDEEF NQ+LATMLY
Sbjct: 52 CRAQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHIDEEFGNQVLATMLY 111
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LDSVD SK ++ Y++ PGGD+TP++AIYDTM S+KS +GT +G+AY++AGFLLA GEKG
Sbjct: 112 LDSVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYAYNIAGFLLAAGEKG 171
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R++MPL+RIA+ P GAARG+A DI+NEA EL RVRDY+FK+L+ KT
Sbjct: 172 LRTSMPLTRIAMQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAVKT 219
>gi|302770831|ref|XP_002968834.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
gi|302784736|ref|XP_002974140.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300158472|gb|EFJ25095.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300163339|gb|EFJ29950.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
Length = 221
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 133/167 (79%)
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
R ++ MMP+G PKV YR EGSWQ+VD+WN LY+ER++FIGQ+ID++ +N+++ATMLYL
Sbjct: 1 RAQVVMMPLGVPKVPYRASSEGSWQYVDIWNVLYQERIVFIGQHIDDDLANRVVATMLYL 60
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
DSVD SK ++ YI+ PGG +TP++AIYDTM S++S + T +G AY +AGFLLA GEKG
Sbjct: 61 DSVDSSKHLHFYISCPGGSLTPSMAIYDTMGSVRSGIATLALGAAYDIAGFLLAAGEKGM 120
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R AMPL+RIAL P GA RGQADDI+ E +EL R+RD ++++L+ T
Sbjct: 121 RMAMPLARIALQPPEGATRGQADDIQTEVNELGRLRDCLYEQLAINT 167
>gi|255078128|ref|XP_002502644.1| predicted protein [Micromonas sp. RCC299]
gi|226517909|gb|ACO63902.1| predicted protein [Micromonas sp. RCC299]
Length = 279
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 46 RVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQN 105
+VH SL + K R MMPIG P+V Y+TP E SWQWVD+WN LYRER++++GQ
Sbjct: 57 KVHASLAVAGGSGKGARSVATMMPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWVGQT 116
Query: 106 IDEEFSNQILATMLYLDSVDD-SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVG 164
IDEE NQ++ATMLYLDS++ K +Y+YIN GGDV PT+AI DTM +KS VG CVG
Sbjct: 117 IDEELGNQLVATMLYLDSIEKGGKDIYLYINTEGGDVVPTMAILDTMGYIKSDVG--CVG 174
Query: 165 F--AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
F A + G LLA G KG R+A+P + I L PAG ARG A DI NE ELL++R I K
Sbjct: 175 FGSARAMGGMLLANGAKGKRAALPNTCIMLHHPAGVARGSASDIHNEGKELLKIRAKINK 234
Query: 223 ELSRKT 228
+SR T
Sbjct: 235 MVSRAT 240
>gi|308813209|ref|XP_003083911.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
gi|116055793|emb|CAL57878.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
Length = 292
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 118/160 (73%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMPIG P+V Y+TP E SWQWVD+WN LYRER+I+IGQ IDEE NQ++ATML+LDSVD
Sbjct: 91 TMMPIGVPRVPYKTPNESSWQWVDIWNCLYRERIIWIGQTIDEELGNQLVATMLFLDSVD 150
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
+K +Y+YI GG + PT+AI DTM+ LK+ VGT G A + G LLA G+KG R+A+
Sbjct: 151 RNKPMYLYITSEGGQIVPTMAIMDTMKHLKAEVGTVGFGSARAMGGLLLASGKKGKRAAL 210
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 225
P + I L P+G ARG A D++NE EL+R+R I K++S
Sbjct: 211 PNTCIMLHHPSGVARGSASDVQNEGKELMRIRSQINKKIS 250
>gi|412985865|emb|CCO17065.1| ATP-dependent Clp protease proteolytic subunit [Bathycoccus
prasinos]
Length = 342
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 62 RGRIA-MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
+ R+A MMPIG P+V Y+TPGE WQWVD+WN LYRER+I+IGQNID+E NQ++ATML+
Sbjct: 138 KKRVATMMPIGVPRVPYKTPGENMWQWVDIWNCLYRERLIWIGQNIDDELGNQLVATMLF 197
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++D +K +Y+YIN GG V PT+AI DTM KS VGT G A + G LL GEKG
Sbjct: 198 LDNLDSTKPMYLYINTEGGQVVPTMAIMDTMNHAKSKVGTVAFGSARAMGGLLLTNGEKG 257
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
R+A+P + + L P+G ARG A D++NE ELL +R+ I K +++ + +
Sbjct: 258 MRAALPNTCVMLHHPSGVARGAASDVQNEGRELLNIREKINKVVAKNCNQD 308
>gi|388517459|gb|AFK46791.1| unknown [Lotus japonicus]
Length = 162
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 106/130 (81%)
Query: 12 PSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIG 71
P SC K+++GLK QS S FG PN++AEFY +V K+L N KP+R RI M+PIG
Sbjct: 16 PPSSCATKIYTGLKPQSASPFGAAIPNVNAEFYAKVDKTLQCRYANHKPVRARIQMVPIG 75
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
TP+V YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDSVD++KR+Y
Sbjct: 76 TPRVPYRTPGEGTWQWVDIWNALYRERVIFIGQEIDEEFSNQILATMLYLDSVDNAKRLY 135
Query: 132 MYINGPGGDV 141
MYINGPG +
Sbjct: 136 MYINGPGWGI 145
>gi|399949673|gb|AFP65331.1| ATP-dependent, proteolytic subunit [Chroomonas mesostigmatica
CCMP1168]
Length = 234
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 119/164 (72%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
I MMPIG PKV YR PG S WVD++N LYRER+IF+GQ ID+E +NQI+A MLYLDS
Sbjct: 36 IKMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSE 95
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D+SK +Y+YIN PGG V LA+YDTM+ +KS V T VG A +A F+LA GEKG R A
Sbjct: 96 DNSKPIYLYINSPGGSVISGLAMYDTMRHIKSEVVTINVGLAASMASFILAAGEKGKRLA 155
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SRI + P G A+GQA DI+ EA ++LR+R + ++ ++ T
Sbjct: 156 LPHSRIMIHQPMGGAQGQASDIKVEAQQILRIRKSLTEDYAQMT 199
>gi|307104278|gb|EFN52533.1| hypothetical protein CHLNCDRAFT_49097 [Chlorella variabilis]
Length = 202
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/161 (58%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YRTP EGSWQWVD+WN LYRER+IF+ + +DEE NQ++ATMLYLDS ++
Sbjct: 1 MPIGVPRVPYRTPKEGSWQWVDIWNCLYRERIIFLSKPVDEELGNQLVATMLYLDS-ENK 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN GG+V P LAI+DTM+ +KS VGT G ++GFLLA G+KG RSA+
Sbjct: 60 KDMNIYINCSGGEVVPCLAIHDTMRHIKSDVGTVGFGGCMGMSGFLLAVGKKGKRSALQN 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P+GAARGQA DI EA ELLR+RDY+ L++ T
Sbjct: 120 TRIMVHHPSGAARGQASDINREARELLRIRDYMDNILAQAT 160
>gi|384245453|gb|EIE18947.1| hypothetical protein COCSUDRAFT_20220 [Coccomyxa subellipsoidea
C-169]
Length = 203
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 120/162 (74%), Gaps = 1/162 (0%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIG P+V YR P G WQWVD+WN LYRER+IF+ + +DEE NQ++ATMLYLDS ++
Sbjct: 1 MMPIGVPRVPYRAPQAGGWQWVDIWNCLYRERIIFLSKAVDEELGNQLVATMLYLDS-EN 59
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN GGDV P LAI+DTM+ + S VGT G ++GFLLA G+KG R A+P
Sbjct: 60 KKDITLYINCSGGDVVPCLAIFDTMKYIGSDVGTVGFGGCMGMSGFLLAVGKKGKRYALP 119
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L P+G+ARGQA DI NEA EL+R+R+Y+ + LS+ T
Sbjct: 120 NTRIMLHHPSGSARGQASDINNEARELMRLRNYVNQVLSQAT 161
>gi|449017357|dbj|BAM80759.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 255
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 123/174 (70%)
Query: 55 IRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQI 114
+R + RI MMP+G PKV +R PG +WVD++N +YRER+IF+G +D+E +NQI
Sbjct: 45 VRESRSSSARIYMMPVGVPKVAFRVPGGTQAEWVDIYNRMYRERIIFLGSELDDELANQI 104
Query: 115 LATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL 174
+A MLYLDS D++K +Y+YIN PGG V LA+YDTM+ +KS V T VG A ++ FLL
Sbjct: 105 IAVMLYLDSEDNTKPIYLYINSPGGSVVAGLAVYDTMRHIKSEVVTINVGLAASMSSFLL 164
Query: 175 AGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
A GEKG R A+P SR+ + P G A+GQA D++ EA+++LR+RD + E S+ T
Sbjct: 165 AAGEKGKRFALPHSRVMIHQPLGGAQGQASDLKVEAEQILRIRDALTYEYSKMT 218
>gi|162606094|ref|XP_001713562.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794482|gb|AAK39857.1|AF165818_65 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 233
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 119/175 (68%), Gaps = 7/175 (4%)
Query: 43 FYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFI 102
FY + H + + N I MMPIG PKV YR PG S WVD++N LYRER+IF+
Sbjct: 15 FYKKKHNVTSNNLIN-------IKMMPIGVPKVAYRVPGSPSADWVDIYNRLYRERIIFL 67
Query: 103 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC 162
GQ ID+E +NQI+A MLYLDS D+SK +YMYIN PGG V LA+YDTM+ +KS V T
Sbjct: 68 GQEIDDEIANQIIAVMLYLDSEDNSKPIYMYINSPGGSVISGLAMYDTMRHIKSEVITIN 127
Query: 163 VGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
VG A ++ F+LA GEKG R A+P SRI + P G A+GQA DI EA ++L++R
Sbjct: 128 VGLAASMSSFILAAGEKGKRLALPHSRIMIHQPMGGAQGQASDIEVEAQQILKIR 182
>gi|160331468|ref|XP_001712441.1| clpP2 [Hemiselmis andersenii]
gi|159765889|gb|ABW98116.1| clpP2 [Hemiselmis andersenii]
Length = 233
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 119/164 (72%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+ MMPIG PKV YR PG S WVD++N LYRER+IF+GQ ID+E +NQI+A MLYLDS
Sbjct: 33 VFMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSE 92
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D+SK +Y+YIN PGG V LA+YDT++ +KS V T VG A +A F+LA GEKG R A
Sbjct: 93 DNSKPIYLYINSPGGSVISGLAMYDTIRHIKSEVVTINVGLAASMASFILAAGEKGKRLA 152
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SRI + P G A+GQA DI+ EA ++LR+R + ++ ++ T
Sbjct: 153 LPHSRIMIHQPMGGAQGQASDIKVEAQQILRIRKSLTEDYAQMT 196
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 197
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 110/150 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEAYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 111/150 (74%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGEQYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGSVTAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G ARGQA DI EA E++R+R
Sbjct: 121 SRIMIHQPSGGARGQATDIEIEAREIIRIR 150
>gi|330040589|ref|XP_003239964.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
gi|327206890|gb|AEA39066.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
Length = 232
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
KP + +I MMPIG PKV YR PG S W+D++N LYRER+IF+GQ ID+E +NQI+A M
Sbjct: 30 KPFQ-KIRMMPIGVPKVAYRIPGSSSADWIDIYNRLYRERIIFLGQEIDDEIANQIIAVM 88
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLDS +SK +Y+YIN PGG V LA+YDT+Q +KS V T +G A +A F+LA G+
Sbjct: 89 LYLDSESNSKPIYLYINSPGGSVISGLALYDTIQHVKSEVITVNIGLAASMASFILASGK 148
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
KG R A+P SR+ + P G A GQA DI EA ++L+++ + ++ +R T
Sbjct: 149 KGKRLALPHSRVMIHQPMGGAHGQASDIEVEAQQILKIKKTLTEDYARMT 198
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 111/150 (74%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG +WVD++N LYRER+IF+GQ +D+E +NQI+A MLYLDS D+S
Sbjct: 1 MPIGIPKVPYQLPGSQYTEWVDIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G+KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGKKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E++R+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREIIRIR 150
>gi|452822409|gb|EME29429.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 262
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 116/164 (70%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+ MMPIG PKV YR PG WVD++N LYRER+IF+GQ ID+E SNQI+A MLYLDS
Sbjct: 62 LTMMPIGVPKVAYRVPGAPQADWVDIYNRLYRERIIFLGQEIDDEISNQIIAVMLYLDSE 121
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D++K +Y+YIN PGG V LAIYDTM+ + S V T VG A ++ FLLA GEKG R A
Sbjct: 122 DNTKPIYLYINSPGGSVIAGLAIYDTMKHIASEVVTVNVGLAASMSSFLLAAGEKGKRLA 181
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SR+ + P G A+GQA DI+ EA ++LR+++ + ++ T
Sbjct: 182 LPHSRVMIHQPMGGAKGQASDIQVEARQILRIKESLVRDYCNMT 225
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9.1|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 108/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LRVR
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVR 150
>gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 198
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 110/150 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG +W+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D+S
Sbjct: 1 MPIGVPKVPYQMPGSQYTEWIDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G+KG R A+P
Sbjct: 61 KDIILYINSPGGSVTAGMAIYDTMQHIKSDVVTVCVGLAASMGSFLLAAGKKGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|427714259|ref|YP_007062883.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378388|gb|AFY62340.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 198
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 109/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEPYTQWIDIYNRLYRERIIFLGRDVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 109/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGETYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVTAGMAIYDTMQHVKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|428207691|ref|YP_007092044.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428009612|gb|AFY88175.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 197
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 109/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEQYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDISLYINSPGGMVTSGMAIYDTMQHIKSDVITICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIR 150
>gi|219124070|ref|XP_002182335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406296|gb|EEC46236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 112/167 (67%)
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
R I MMPIG PKV YR PG S WVD++N LYRER+IF+G ID+E +NQ++ MLYL
Sbjct: 6 RATITMMPIGVPKVAYRVPGSQSADWVDIYNRLYRERIIFLGAEIDDELANQVIGVMLYL 65
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
DS D SK +Y+YIN PGG V LAI+D MQ +KS V T +G A + F+L G KG
Sbjct: 66 DSEDSSKPIYLYINSPGGSVISGLAIFDAMQHIKSEVITINLGLAASMGSFILGAGSKGK 125
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R A+P SR + P G A+GQA+DI+ EA +++R+RD + K S T
Sbjct: 126 RLALPSSRTMIHQPMGGAQGQAEDIKVEAAQIMRIRDNLVKSYSMMT 172
>gi|224179483|ref|YP_002601006.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
gi|217314526|gb|ACK36869.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
Length = 201
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 119/161 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QW+DL+N LYRERV+F+G ++D+E +NQ++ M+YL + D+S
Sbjct: 1 MPIGVPKVAFRLPGEPTPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMIYLSAEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
KR+++YIN PGG VT LA+YD M +++ V T C+G A +A F+LAGGE+G+R A+P
Sbjct: 61 KRIFIYINSPGGSVTCGLAVYDAMHHIQARVTTLCIGIAASMASFVLAGGERGHRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SR+ + P G ++GQA D+ EA+E++R+R I + + +T
Sbjct: 121 SRVMIHQPQGGSQGQASDVTAEAEEVMRIRRQIGRIYAERT 161
>gi|254409743|ref|ZP_05023524.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183740|gb|EDX78723.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 198
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG W+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D++
Sbjct: 1 MPIGVPKVPYQLPGSPYSDWIDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLL G++G R A+P
Sbjct: 61 KDIYLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGKQGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+G RGQA DI EA E+LR+R + + + KT
Sbjct: 121 SRIMIHQPSGGVRGQATDIEIEAREILRIRRQLNQIYADKT 161
>gi|428221047|ref|YP_007105217.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994387|gb|AFY73082.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 198
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 113/161 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D +
Sbjct: 1 MPIGVPKVPYKMPGDPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AI+DTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIRLYINSPGGSVTAGMAIFDTMQHIKSDVTTICVGLAASMGSFLLMAGTKGKRFALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G RGQA DI EA E+LR++ + E +++T
Sbjct: 121 SRIMIHQPMGGTRGQATDIEIEAREILRIKKQLNLEYAKRT 161
>gi|397613755|gb|EJK62404.1| hypothetical protein THAOC_16984 [Thalassiosira oceanica]
Length = 289
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 112/164 (68%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
I MMPIG PKV YR PG +WVD++N LYRER+IF+G ID+E +NQI+ MLYLD
Sbjct: 57 ITMMPIGVPKVAYRVPGGAGAEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEE 116
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D SK +Y+YIN PGG V LAI+D MQ +KS V T +G A +A F+L+ G KG R A
Sbjct: 117 DSSKPIYLYINSPGGSVIAGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLA 176
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SRI + P G A+GQA DI+ EA +++R+RD + K S T
Sbjct: 177 LPSSRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFT 220
>gi|224178037|ref|YP_002600892.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
gi|215882704|gb|ACJ71077.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
Length = 198
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 118/161 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE + QW+DL+N LYRERV+F+G ++D+E +NQ++ MLYL + D+S
Sbjct: 1 MPIGVPKVAYRLPGEPAPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMLYLSAEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
KR+Y+YIN PGG VT +A+YD MQ + + V T CVG A +A F+LAGGE+G+R A+
Sbjct: 61 KRLYIYINSPGGSVTCGIAVYDAMQHVNASVTTICVGIAASMASFVLAGGERGHRLALSH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G ++GQA ++ EA+E++R+R + + + +T
Sbjct: 121 ARIMIHQPQGGSQGQASEVTAEAEEVMRIRRQVGQIYAERT 161
>gi|220906939|ref|YP_002482250.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7425]
gi|219863550|gb|ACL43889.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 198
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 106/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KDIVLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGAPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E++R+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREIIRIR 150
>gi|414079205|ref|YP_007000629.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972484|gb|AFW96572.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 197
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIR 150
>gi|376403584|ref|YP_005089857.1| clpP gene product (chloroplast) [Pedinomonas minor]
gi|229915491|gb|ACQ90835.1| proteolytic subunit 2 of clp protease [Pedinomonas minor]
Length = 199
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE QWVDL+N +YRERV+F Q +D+EF+NQ++ MLYL++ D +
Sbjct: 1 MPIGVPKVPFRMPGESGAQWVDLYNRMYRERVLFFCQELDDEFANQLIGIMLYLNAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YDTM +K V T CVG A +A F+LAGG+KGNR A+P
Sbjct: 61 KPLYIYINSPGGSVTCGIAVYDTMNYIKCGVSTICVGTAASMASFVLAGGDKGNRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G ++GQA ++ +E++E+LR+R + + + KT
Sbjct: 121 ARIMIHQPEGGSQGQASEVLSESEEVLRIRRQVGRIYAEKT 161
>gi|17231849|ref|NP_488397.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759069|sp|Q8YP43.1|CLPP3_ANASP RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|17133493|dbj|BAB76056.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 197
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|427730534|ref|YP_007076771.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366453|gb|AFY49174.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 197
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|323448447|gb|EGB04345.1| hypothetical protein AURANDRAFT_32730 [Aureococcus anophagefferens]
Length = 197
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 112/155 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG S W+D++N LYRER+IF+GQ ID+E +NQI+ MLYLDS D +
Sbjct: 1 MPIGVPKVAYRVPGAPSADWIDIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V LAI+DTM +KS V T +G + +A FLL GG KG+R A+P
Sbjct: 61 KPIYLYINCPGGSVIAGLAIFDTMNHIKSKVVTINIGLSASMASFLLCGGTKGSRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
SR+ + P G A+GQA+DI+ EA +++R+++ + K
Sbjct: 121 SRVMIHQPMGGAQGQAEDIKVEAAQIIRIKENLVK 155
>gi|75907528|ref|YP_321824.1| ATP-dependent Clp protease proteolytic subunit [Anabaena variabilis
ATCC 29413]
gi|115311345|sp|Q3MDK7.1|CLPP2_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|75701253|gb|ABA20929.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 197
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|427721125|ref|YP_007069119.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427353561|gb|AFY36285.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 197
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 111/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGIPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+G RGQA DI EA E+LR+R + + KT
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNGIYAEKT 161
>gi|108773366|ref|YP_635828.1| ATP-dependent Clp protease proteolytic subunit [Oltmannsiellopsis
viridis]
gi|122195154|sp|Q20F17.1|CLPP_OLTVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|82541948|gb|ABB81989.1| proteolytic subunit 2 of clp protease [Oltmannsiellopsis viridis]
Length = 195
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 119/161 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YDTM +K+ V T CVG A +A F+LAGG +G R A+P
Sbjct: 61 KDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +RGQA ++ +E++E++R+R + K +++T
Sbjct: 121 SRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRT 161
>gi|427707093|ref|YP_007049470.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359598|gb|AFY42320.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 197
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 110/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+G RGQA DI EA E+LR+R + S+ T
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAKEILRIRHQLNNIYSQNT 161
>gi|303289849|ref|XP_003064212.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454528|gb|EEH51834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 116/168 (69%), Gaps = 17/168 (10%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+TP E SWQWVD+WN LYRER+++IGQ ID+E NQ++ATMLYLD+ D S
Sbjct: 1 MPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWIGQQIDDELGNQLVATMLYLDTTDKS 60
Query: 128 -KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF--------AYHLA------GF 172
K +Y+YIN GG+V PT+AI DTM+ +KS VG CVGF A++L
Sbjct: 61 GKDIYLYINSEGGEVVPTMAILDTMKHIKSDVG--CVGFGSARAMGGAFYLTLVPIRPRM 118
Query: 173 LLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
LLA G KG R+A+P + I L P+GAARG A DI NE ELL++R I
Sbjct: 119 LLACGAKGKRAALPNTCIMLHHPSGAARGAASDINNEGRELLKIRAKI 166
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 110/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG +WVD++N LYRER+IF+G ID+E +NQI+ MLYLD D +
Sbjct: 1 MPIGVPKVAYRVPGSSGGEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V LAI+D MQ +KS V T +G A +A F+L+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVISGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLALPS 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI+ EA +++R+RD + K S T
Sbjct: 121 SRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFT 161
>gi|186681465|ref|YP_001864661.1| ATP-dependent Clp protease proteolytic subunit [Nostoc punctiforme
PCC 73102]
gi|186463917|gb|ACC79718.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 203
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIR 150
>gi|119512063|ref|ZP_01631157.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463289|gb|EAW44232.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 197
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 111/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+G RGQA DI EA E+LR+R + + KT
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNGIYAEKT 161
>gi|434402516|ref|YP_007145401.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256771|gb|AFZ22721.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 197
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 107/150 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A +LYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVLLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIFLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIR 150
>gi|302835744|ref|XP_002949433.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
gi|300265260|gb|EFJ49452.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
Length = 269
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 32 FGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLW 91
G KP F+ H+ + S R+ P R MMP+ PKVL R PG+ +WVDLW
Sbjct: 19 LGRSKPQ---GFWQVTHQQISSAKRSGAPKRKVTTMMPVSVPKVLVRPPGQKQMEWVDLW 75
Query: 92 NALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTM 151
A ++V+FI + I EE +N ++A LYLDS+D+ KR+Y ++N PGG+V PTLA+YDTM
Sbjct: 76 EAYTYQKVVFIKEAITEEVANNMIALTLYLDSLDN-KRIYYWLNCPGGEVVPTLALYDTM 134
Query: 152 QSLKSPVGTHCVGFAYHLAGFLL-AGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEA 210
Q ++S T C G + GFLL GGEKG R AMP S + + P+GA+RGQA ++ E+
Sbjct: 135 QYVRSKTATVCYGLCLGMGGFLLTTGGEKGYRFAMPHSILMMHHPSGASRGQASEMHIES 194
Query: 211 DELLRVRDYIFKELSRKT 228
EL+R+RDY+ +S T
Sbjct: 195 RELVRMRDYLSLLVSNST 212
>gi|428317797|ref|YP_007115679.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428241477|gb|AFZ07263.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 197
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 109/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG QW+++++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYKMPGGYDTQWINIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVSAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI+ EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAKEILRLR 150
>gi|162134289|gb|ABX82591.1| proteolytic subunit 2 of clp protease [Trebouxia aggregata]
Length = 224
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 119/161 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + S
Sbjct: 28 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 87
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YDTM +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 88 KGLFIYINSPGGSVTCGIAVYDTMNYVKADVTTICVGTAASMASFVLAGGDRGKRLALPH 147
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA +I +E++E++R+R + K + +T
Sbjct: 148 SRIMIHQPEGGSQGQASEILSESEEVMRIRRQVGKIYAERT 188
>gi|334118044|ref|ZP_08492134.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460029|gb|EGK88639.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 197
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 109/150 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG QW+++++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYKMPGGYDTQWINIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVSAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI+ EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAKEILRLR 150
>gi|443324640|ref|ZP_21053379.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795739|gb|ELS05087.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 199
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 114/163 (69%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+ +++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGIPKVPYQMPGQTYSDWISIYDRLYRERIIFLGRGVNDGIANQIIAIMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMRHIKSEVVTICVGLAASMGAFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA+E+LR+RD + + L+ T
Sbjct: 121 SRIMIHQPLGGVQGRRQATDIEIEANEILRIRDQLNQMLADNT 163
>gi|7524837|ref|NP_045839.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
gi|3023501|sp|P56317.1|CLPP_CHLVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2224431|dbj|BAA57915.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
Length = 201
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 116/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E+ E++R+R + + S +T
Sbjct: 121 SRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERT 161
>gi|331268128|ref|YP_004347777.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
gi|325296305|gb|ADZ05025.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
Length = 201
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E++E++R+R + + S +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYSERT 161
>gi|323149170|ref|YP_004221999.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
gi|317467226|gb|ADV29847.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 195
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPTAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD+M +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDSMNYVKADVTTICVGTAASMASFVLAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E+ E++R+R + K + +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESSEVMRIRRQVGKIYAERT 161
>gi|409052506|ref|YP_006666464.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Trebouxiophyceae sp. MX-AZ01]
gi|402746124|gb|AFQ93819.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Trebouxiophyceae sp. MX-AZ01]
Length = 195
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPTAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD+M +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYVYINSPGGSVTCGIAVYDSMNYVKADVTTICVGTAASMASFVLAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E+ E++R+R + K + +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESSEVMRIRRQVGKIYAERT 161
>gi|440684795|ref|YP_007159590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428681914|gb|AFZ60680.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 197
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 106/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ L RER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLSRERIIFLGRDVDDEIANQIIAIMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIFLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E++R+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREIIRIR 150
>gi|411118653|ref|ZP_11391034.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712377|gb|EKQ69883.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 199
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 111/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG G QW++++ L+RER+IF+ + +D+ +N I+A +LYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGGGYEQWINIYERLFRERIIFLSEEVDDGIANAIVAYLLYLDSDDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIFDTMQHIKSEVVTICVGLAASMGAFLLAAGSKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G +RGQA DI EA E+LR+R + + L+ +T
Sbjct: 121 ARIMIHQPLGGSRGQATDIEIEAREILRIRQQLNEILAERT 161
>gi|428299969|ref|YP_007138275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236513|gb|AFZ02303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 198
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 105/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+D++N L+ ER+IF+G+ +D++ +N+I+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGGQQTQWIDIYNRLFLERIIFLGREVDDDIANKIIAEMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ LAI+DTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIILYINSPGGSVSAGLAIFDTMQHIKSDVATICVGLAASMGSFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E++R+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREIIRIR 150
>gi|260780695|ref|YP_003227081.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
gi|260176773|gb|ACX33782.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
Length = 199
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG +G R A P
Sbjct: 61 KDLYIYINSPGGSVTCGIAVYDIMNYIKSDVTTICVGTAASMASFILAGGCRGKRIAFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E++E++R+R + + + +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGQIYAERT 161
>gi|159467461|ref|XP_001691910.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158278637|gb|EDP04400.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 282
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 8/214 (3%)
Query: 11 QPSLSCNLKLFSGLKI---QSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAM 67
+PS + + SG I + +V G P F+ K + + R+ P R M
Sbjct: 7 RPSRATTKTMASGAYIGVKPAANVVGKKSPQ---GFWQVTTKQISAAKRSGAPKRKVTTM 63
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ PKVL R PG+ +WVDLW A ++V+FI + I E+ +N ++A LYLDS+D
Sbjct: 64 MPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLDQ- 122
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL-AGGEKGNRSAMP 186
KR+Y ++N PGGDV PTLA+YDTMQ ++S T C G + GFLL AGGEKG R AMP
Sbjct: 123 KRIYYWLNVPGGDVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLLTAGGEKGYRFAMP 182
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
S + + P+GA+RGQA ++ E+ EL+R+RDY+
Sbjct: 183 HSILMMHHPSGASRGQASEMHIESRELVRMRDYL 216
>gi|223369879|gb|ACM88806.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chlorella sorokiniana]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSDVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E++E++R+R + + + +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYAERT 161
>gi|443323686|ref|ZP_21052690.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786668|gb|ELR96397.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 200
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 111/163 (68%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ W+DL+N LYRER+IF+G+ +++ +NQI++ MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGQPYSDWIDLYNRLYRERIIFLGRGVNDSLANQIISVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGLAASMGAFLLGAGTPGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA+E+LR+R+ + + +S T
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEANEILRIREQLNQIMSHHT 163
>gi|428217035|ref|YP_007101500.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988817|gb|AFY69072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 199
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PG W+ +++ LYRER+IF+GQ +D+E +N+I+A MLYLDS +
Sbjct: 1 MPIGVPRVPYRMPGSQYTDWISIYDRLYRERIIFLGQEVDDEIANRIVAVMLYLDSEEPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KDIRLYINSPGGSVTAGLAIYDTMQHIKSDVSTICVGLAASMGSFLLMAGTPGKRYALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P+ G RGQA DI EA E+LR++D + +E + +T
Sbjct: 121 SRIMMHQPSMGGTRGQATDIEIEAKEILRIKDLLNREYATRT 162
>gi|443315108|ref|ZP_21044618.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785290|gb|ELR95120.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 206
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 109/161 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + + + +N I+A +LYLDS D++
Sbjct: 1 MPIGVPSVAYRLPGSPYEQWISIYERLFRERIIFLSEEVTDSIANAIVAYLLYLDSEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G KG R+A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLAAGTKGKRTALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P ARGQA DI EA E+LRV+ + K L+ +T
Sbjct: 121 ARIMIHQPLSGARGQATDIEIEAKEVLRVKHTLNKMLAERT 161
>gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 194
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 105/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A +LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIR 150
>gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 197
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 105/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYFLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLATGTQGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI+ EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAQEILRIR 150
>gi|108796955|ref|YP_636255.1| ATP-dependent Clp protease proteolytic subunit [Pseudendoclonium
akinetum]
gi|122217843|sp|Q3ZJ12.1|CLPP_PSEAK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56159653|gb|AAV80677.1| proteolytic subunit 2 of clp protease [Pseudendoclonium akinetum]
Length = 198
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 113/161 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR G +WVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ D S
Sbjct: 1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT + ++D M +KS V T CVG A +A F+LAGG KG R A+P
Sbjct: 61 KGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA + +E++E+LR+RD + + S +T
Sbjct: 121 SRIMIHQPEGGSQGQASVVLSESEEVLRIRDEVAQIYSERT 161
>gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 194
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 105/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A +LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVITICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIR 150
>gi|409990518|ref|ZP_11273881.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938615|gb|EKN79916.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 198
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 108/161 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWIGIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGMAASMGAFLLAAGTKGKRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G RGQA DI EA E+LR+R + + L+ ++
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERS 161
>gi|385153245|gb|AFI43874.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
gi|385153249|gb|AFI43877.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
gi|385153253|gb|AFI43880.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
Length = 203
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYR+RV+F+ Q +D+E +NQ++ MLYL++ ++S
Sbjct: 1 MPIGVPKVPFRMPGEPAAQWVDLYNRLYRDRVLFLCQELDDELANQLIGIMLYLNAEEES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLFLYINSPGGSVTCGIAVYDAMHYVEADVTTICVGTAASMASFVLAGGDRGRRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G ++GQA D+ +E+ E+LR+R + + + +T
Sbjct: 121 ARIMIHQPEGGSQGQASDVVSESSEVLRIRHQVGRIYAERT 161
>gi|376003777|ref|ZP_09781580.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066153|ref|ZP_17054943.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
gi|375327808|emb|CCE17333.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712195|gb|EKD07384.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
Length = 198
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 108/161 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWISIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ ++S V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIRSDVVTICVGMAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G RGQA DI EA E+LR+R + + L+ ++
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERS 161
>gi|385153257|gb|AFI43883.1| clp protease proteolytic subunit (chloroplast) [Elliptochloris
reniformis]
Length = 203
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 117/161 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYR+RV+F+ Q +D+E +NQ++ MLYL++ ++S
Sbjct: 1 MPIGVPKVPFRMPGEPAAQWVDLYNRLYRDRVLFLCQELDDELANQLIGIMLYLNAEEES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLFLYINSPGGSVTCGIAVYDAMHYVEADVTTICVGTAASMASFVLAGGDRGRRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G ++GQA D+ +E+ E+LR+R + + + +T
Sbjct: 121 ARIMIHQPEGGSQGQASDVVSESSEVLRIRHQVGQIYAERT 161
>gi|158335482|ref|YP_001516654.1| ATP-dependent Clp protease proteolytic subunit [Acaryochloris
marina MBIC11017]
gi|158305723|gb|ABW27340.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 198
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 103/150 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +NQI+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRIPGSPYERWVDIYTRLSQERIIFLGQEVTDGLANQIVAFLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPISIYINSPGGSVTAGLAIYDTMQHIKSEVATICVGLAASMGSFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G ARGQA DI EA E++RVR
Sbjct: 121 SRIMIHQPSGGARGQASDIEIEAKEIIRVR 150
>gi|359457308|ref|ZP_09245871.1| ATP-dependent Clp protease proteolytic subunit [Acaryochloris sp.
CCMEE 5410]
Length = 198
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 103/150 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +NQI+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRIPGSPYERWVDIYTRLSQERIIFLGQEVTDGLANQIVAFLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPISIYINSPGGSVTAGLAIYDTMQHIKSEVATICVGLAASMGSFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G ARGQA DI EA E++RVR
Sbjct: 121 SRIMIHQPSGGARGQASDIEIEAKEIIRVR 150
>gi|428776590|ref|YP_007168377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428690869|gb|AFZ44163.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 200
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 113/163 (69%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ I++ +NQ++A MLYLDS D S
Sbjct: 1 MPIGVPRVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGINDSLANQVIAVMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V+ +AIYDTMQ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA E+LR+R+ + K ++ T
Sbjct: 121 SRIMIHQPMGGTQGRRQATDIEIEAREILRIREQLDKIMAENT 163
>gi|434399879|ref|YP_007133883.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
gi|428270976|gb|AFZ36917.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
Length = 199
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+ +++ LYRER+IF+G+ I++ +NQI+A MLYLDS D
Sbjct: 1 MPIGIPKVPYQMPGQPYSDWISIYDRLYRERIIFLGRGINDGIANQIIAIMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSDVVTICVGLAASMGAFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA E+LR+RD + + ++ T
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIRDQLNQMMADNT 163
>gi|428215428|ref|YP_007088572.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
gi|428003809|gb|AFY84652.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
Length = 197
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 109/162 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ QW+DL LY+ER+IF+G +D+E +N+I+A MLYLDS +
Sbjct: 1 MPIGYPKVPYRLPGDTYTQWIDLETRLYQERIIFLGSEVDDELANKIIAIMLYLDSEEAG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G R A+P
Sbjct: 61 KDIILYINSPGGSVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGAPNKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
SRI + P+G RGQA DI EA E++R+R + + + +T+
Sbjct: 121 SRIMIHQPSGGVRGQASDIEIEAREIIRIRRQLNQIYANRTN 162
>gi|37523335|ref|NP_926712.1| ATP-dependent Clp protease proteolytic subunit [Gloeobacter
violaceus PCC 7421]
gi|60389714|sp|Q7NEW2.1|CLPP1_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|35214339|dbj|BAC91707.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 112/161 (69%), Gaps = 1/161 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG G QW+D++N L +R+IF+G+ +D+E +N I+A+MLYLDS D
Sbjct: 1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPE 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG V+ LAIYDTMQ +++ V T CVG A + FLL G KG R+++P
Sbjct: 60 KDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPH 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI +A E+L +D + + LS +T
Sbjct: 120 SRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERT 160
>gi|427736765|ref|YP_007056309.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371806|gb|AFY55762.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 198
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 105/150 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V Y+ PGE QWV+++ L R+R+IF+G ++++ +N+I+A MLYLDS D
Sbjct: 1 MPIGYPSVPYKLPGEQYTQWVNIYTRLARDRIIFLGDEVNDQIANEIIAIMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T C+G A + FLL GG KG R A+P
Sbjct: 61 KDIFLYINSPGGVVTSGLAIYDTMQHIKSDVVTICLGLAASMGSFLLGGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P+G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAKEILRIR 150
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 111/161 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSTYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAYLLYLDSDDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIFIYINSPGGSVTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G RGQA DI+ EA E+LRVR + + L+++T
Sbjct: 121 ARIMIHQPLGGTRGQATDIQIEAKEILRVRQQLNEMLAKRT 161
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 199
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 108/152 (71%), Gaps = 2/152 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D+S
Sbjct: 1 MPIGVPRVPYQLPGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVR 217
SRI + P G +G QA DI EA E+LR++
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIK 152
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D++
Sbjct: 1 MPIGVPRVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRD 218
SRI + P G +G QA DI EA E+LR+++
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIKN 153
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A MLYLDS D +
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +K+ V T C+G A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKGKRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G RGQA DI EA+E+LRVR + L+ +T
Sbjct: 121 SRIMIHQPMGGTRGQATDIEIEANEILRVRSELNNMLAERT 161
>gi|428778679|ref|YP_007170465.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692958|gb|AFZ49108.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 200
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ WV++++ LYRER+IF+G+ I++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGINDGLANQIIAVMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V+ +AIYDTMQ +KS V T CVG A + FLL G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLTAGTQGKRIALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA E+LR+R + + +++ T
Sbjct: 121 SRIMIHQPLGGTQGRRQATDIEIEAREILRIRQQLDEIMAKNT 163
>gi|254798629|ref|YP_003058293.1| ATP-dependent Clp protease proteolytic subunit [Parachlorella
kessleri]
gi|229915577|gb|ACQ90920.1| proteolytic subunit 2 of clp protease [Parachlorella kessleri]
Length = 202
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 113/161 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCGELDDELANQLIGIMLYLNAEEKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG G R A+P
Sbjct: 61 KGIYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGAYGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++GQA ++ +E+ E++R+R + + + +T
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESQEVMRIRREVGRIYAERT 161
>gi|354567563|ref|ZP_08986732.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542835|gb|EHC12296.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 200
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PGE QW+ +++ L R+R+IF+G+ ID++ +N+I+A MLYLDS D
Sbjct: 1 MPIGYPSVPYRLPGEQFTQWIHIYSRLARDRIIFLGEEIDDKLANEIIAIMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG + LA+YDTMQ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KDIYLYINSPGGAIDSGLAVYDTMQHIKSDVVTICVGLAASMGSFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSP--AGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI EA E+LR+R
Sbjct: 121 SRIMIHQPLLPGGMRGQASDIEIEAREILRIR 152
>gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 198
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 107/161 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +N+I+A+MLYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWVDIYTRLNQERIIFLGQEVTDGLANRIVASMLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G RGQA DI EA E+LR+R + L+ +
Sbjct: 121 ARIMIHQPMGGTRGQASDIEIEAREILRIRSLLNSILAERA 161
>gi|427724371|ref|YP_007071648.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356091|gb|AFY38814.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 200
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 13/179 (7%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWINIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+RI + P G +G QA DI EA E+LR++ + +++ + TD + F
Sbjct: 121 ARIMIHQPLGGTQGRRQATDIEIEAKEILRIKQQLNELMADHSGQTVEQIEKDTDRDNF 179
>gi|443310464|ref|ZP_21040115.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779502|gb|ELR89744.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 197
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 109/161 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE QW++++ L ER+IF+ + + +N I+A +LYLDS D S
Sbjct: 1 MPIGIPRVPHRFPGEPYTQWINIYERLSLERIIFLSGEVTDGMANSIIARLLYLDSEDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYIYINSPGGSVTAGLAIYDTMQHIKSNIVTICVGMAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PAG A+GQA DI EA E+LR+R + + L+ +T
Sbjct: 121 ARIMIHQPAGGAQGQATDIEIEAREILRLRHQLNQMLADRT 161
>gi|226968697|ref|YP_002808657.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
gi|226431175|gb|ACO55581.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
Length = 200
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 104/153 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D
Sbjct: 1 MPIGVPKVAYRLPGEAVPQWVDLYNRLYRERVLFLGSALDDELANQLNGIMLYLSAEDSQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+R+++YIN PGG VT L+++D M + + V T +GFA +A F+LAGGE+G R A+P
Sbjct: 61 RRLFLYINSPGGSVTAGLSVFDIMNYVDAAVTTIGIGFAASMASFILAGGERGARLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
RI + P G GQA +I E DE++R+R I
Sbjct: 121 CRIMIHQPQGGMEGQASEIVLEKDEIIRLRKLI 153
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWINIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +G QA DI EA E++R++ + + ++ T
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIDIEAKEIIRIKHQLNELMAAHT 163
>gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
Length = 200
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+ QA DI EA+E+LR+++ + + ++ T
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEANEILRIKEMLNRSMAAMT 162
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3.1|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7.1|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 199
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++N L ER+IF+GQ + + +N I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KSPV T C+G A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G R QA DI EA E+LR++ + + ++ +T
Sbjct: 121 SRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRT 162
>gi|113170419|ref|YP_717211.1| ClpP [Ostreococcus tauri]
gi|122228950|sp|Q0P3P4.1|CLPP_OSTTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112806826|emb|CAL36333.1| ClpP [Ostreococcus tauri]
Length = 200
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 107/153 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE + QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D S
Sbjct: 1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDAS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++YIN PGG VT L+++D M +++ V T +GFA +A F+LAGGE+G+R A+P
Sbjct: 61 RSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
R+ + P G GQA ++ E +E++R+R I
Sbjct: 121 CRVMIHQPQGGMEGQASEVVLEKEEIVRLRRLI 153
>gi|427702649|ref|YP_007045871.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345817|gb|AFY28530.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 203
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVTDGIANSLVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
SRI + P G ++ QA DI EA E+LR++D + + L+
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSLA 159
>gi|78185116|ref|YP_377551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013823|sp|Q3AVC3.1|CLPP3_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78169410|gb|ABB26507.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 200
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G +R QA DI EA E+LR++D + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYF 178
>gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|115311346|sp|Q319H4.1|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 203
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 115/178 (64%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G ++ QA DI EA E+LR++D + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYF 178
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7.1|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS + T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+ QA DI EA E+LR+++ + K ++ T
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMT 162
>gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|124013824|sp|Q3ALC4.1|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 200
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
SRI + P G +R QA DI EA E+LR+++ + + LS
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLS 159
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ++++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQDVNDGVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+ QA DI EA E+LR+++ + + ++ T
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMADMT 162
>gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460509|sp|Q7U5Q2.1|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
WH 8102]
Length = 200
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
SRI + P G +R QA DI EA E+LR+++ + + LS
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLS 159
>gi|229915410|gb|ACQ90755.1| proteolytic subunit 2 of clp protease [Oocystis solitaria]
Length = 204
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 114/161 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRER++F+ Q++D+E SNQ++ MLYL++ +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLFNRLYRERLLFLCQDLDDEVSNQLIGIMLYLNAEEKF 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN GG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KDIYIFINSLGGSVTCGIAVYDVMNFVEADVSTICVGTAASMASFVLAGGKRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G +GQA ++ +E++E+ R+R + + + +T
Sbjct: 121 TRIMIHQPEGGGQGQASEVLSESEEVRRLRRQVGQIYAEQT 161
>gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 200
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGGEVNDGVANALVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYIKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
SRI + P G A+ QA DI EA E+LR++D + K+L+
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKDQLNKQLA 159
>gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 200
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
+RI + P G ++ QA DI EA E+LR++D + + L+
Sbjct: 121 ARIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSLA 159
>gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109]
gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109]
Length = 200
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELS 225
SRI + P G +R QA DI EA E+LR+++ + + L+
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLA 159
>gi|224179410|ref|YP_002600868.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
gi|217314453|gb|ACK36795.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
Length = 224
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 101/150 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QWVDL+N LYRERV+F+GQ +D+E NQI+ MLYL + D S
Sbjct: 1 MPIGVPKVPYRLPGEQQAQWVDLYNRLYRERVLFLGQELDDELCNQIVGMMLYLSAEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +YIN PGG VT LA++DTM+ + + + T C+G A A F+L GG R A+P
Sbjct: 61 QNQELYINSPGGAVTCGLALFDTMEHVAANIITVCMGLAASTASFVLCGGTPLRRCALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVR 217
+R+ + P G RGQA +I E+ E+LR+R
Sbjct: 121 ARVMIHQPEGGTRGQASEIIYESVEILRLR 150
>gi|428202895|ref|YP_007081484.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980327|gb|AFY77927.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 199
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQFERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYMYINSPGGSVTAGMAIYDTMQYIKADVITICVGLAASMGAFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G R QA DI EA E++R+R + + L+++T
Sbjct: 121 SRIMIHQPLGGTGRRQATDIEIEAKEIIRIRRQLNEILAQRT 162
>gi|172036826|ref|YP_001803327.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554635|ref|ZP_08973939.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698280|gb|ACB51261.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553444|gb|EHC22836.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 199
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ +++ +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVNDAIANRIVALLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI EA+E+LR+R + + L+ K
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNQILADKC 162
>gi|22711907|ref|NP_683797.1| ATP-dependent Clp protease proteolytic subunit [Chaetosphaeridium
globosum]
gi|25008304|sp|Q8M9Y9.1|CLPP_CHAGL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22416911|gb|AAM96511.1| proteolytic subunit 2 of clp protease [Chaetosphaeridium globosum]
Length = 201
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV YR PG+ QW+DL+N LYRER++F+GQ ++ E +NQI+ MLYL+ D S
Sbjct: 1 MPVGVPKVPYRLPGDVQVQWIDLYNRLYRERILFLGQTVNYEIANQIIGLMLYLNGDDKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVVPGIAIYDTMQFVEPEIRTICMGVAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P+ + + QA ++ EA+E+L++RD I K ++T
Sbjct: 121 ARVMIHQPSSSYYKDQAGELIMEAEEVLKLRDCITKVYVQRT 162
>gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 200
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+ QA DI EA E+LR+++ + + ++ T
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNRSMADMT 162
>gi|318040432|ref|ZP_07972388.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 200
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
SRI + P G ++ QA DI EA E+LR++D + + ++ T E
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSMADMTGQE 165
>gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 112/178 (62%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFMGSEVNDAVANALVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G ++ QA DI EA E+LR++D + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTSQRQASDIAIEAKEILRIKDMLNHSMADMTGQPFEKIEKDTDRDYF 178
>gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
+MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D
Sbjct: 23 IMPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGVANSLVAQMLYLDSEDS 82
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G K R A+P
Sbjct: 83 TKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALP 142
Query: 187 LSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++ QA DI EA E+LR+++ + + L+ T
Sbjct: 143 HSRIMIHQPLGGTSQRQASDIEIEAKEILRIKEMLNRSLAEMT 185
>gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 201
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++ QA DI EA E+LR++D + K ++ T
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNKSMADMT 162
>gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7424]
gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 199
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V +R PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G R QA DI EA E+LR+R + + L+ +T
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRQQLNQMLAERT 162
>gi|352096272|ref|ZP_08957152.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676966|gb|EHA60117.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 200
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G ++++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSDVNDGVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+ QA DI EA E+LR+++ + + ++ T
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMADMT 162
>gi|307152499|ref|YP_003887883.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982727|gb|ADN14608.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 199
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G R QA DI EA E+LR+R + + L+ +T
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRTQLNQMLADRT 162
>gi|218245805|ref|YP_002371176.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8801]
gi|34222618|sp|Q93AD7.1|CLPP_SYNP8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16506757|gb|AAL23931.1|AF423175_1 putative ATP-dependent Clp proteinase [Cyanothece sp. PCC 8801]
gi|218166283|gb|ACK65020.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
Length = 199
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI+ EA+E+LR+R + + L+ KT
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKT 162
>gi|443478434|ref|ZP_21068189.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443016286|gb|ELS30982.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 197
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PG+ QW++++ L ER++F+ + + +N ++A MLY DS D +
Sbjct: 1 MPIGVPRVPYRYPGDSYTQWINIYERLSLERIMFMSGEVTDGMANSMIARMLYFDSEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V+ LAI+DTMQ +K+ V T CVG A + +LL G KG R A+P
Sbjct: 61 KDIYMYINSPGGSVSAGLAIFDTMQHIKADVTTICVGLAASMGSYLLMAGAKGKRYALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P+G RGQA DI EA E++R+R + E +++T
Sbjct: 121 ARIMIHQPSGGTRGQASDIEIEAREIIRIRQKLNSEYAKRT 161
>gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460515|sp|Q7V0F1.1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 201
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++ QA DI EA E+LR++D + +S T
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMT 162
>gi|126657894|ref|ZP_01729047.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620834|gb|EAZ91550.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 199
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGIANRIVALLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI EA+E+LR+R + + L+ +
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRSQLNQLLANQC 162
>gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460521|sp|Q7VAR9.1|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 200
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G K R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++ QA DI EA E+LR++D + + ++ T
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMT 162
>gi|443329661|ref|YP_007374739.1| ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale]
gi|441017852|gb|AGC26652.1| ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale]
Length = 204
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E SNQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDLYLYINSPGGAVLPGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARIMIHQPASSYYDGQAGECVLEAEEILKLRDCITKVYVQRT 162
>gi|257058851|ref|YP_003136739.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8802]
gi|256589017|gb|ACU99903.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 199
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI+ EA+E+LR+R + + L+ KT
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAYKT 162
>gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 200
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 111/178 (62%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G + QA DI EA E+LR++D + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQTFEKIEKDTDRDYF 178
>gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460518|sp|Q7V8M4.1|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 111/178 (62%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G + QA DI EA E+LR++D + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYF 178
>gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 200
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G A+ QA DI EA E+LR+++ + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMAEMSGQSFEKIEKDTDRDYF 178
>gi|254423169|ref|ZP_05036887.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196190658|gb|EDX85622.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 200
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 110/178 (61%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSTYEQWISIYERLFRERIIFLTEEVDDGIANAIVAYMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T C+G A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICMGLAASMGAFLLNAGTKGKRLALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P+ G R QA DI EA +++VR + +E+ R +D + F
Sbjct: 121 SRIMIHQPSGGVGRRQATDIEIEAVRIVQVRRELNELMAAHSGRTVEEIERDSDRDNF 178
>gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|383322904|ref|YP_005383757.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326073|ref|YP_005386926.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491957|ref|YP_005409633.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437225|ref|YP_005651949.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815318|ref|YP_007451770.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|3023511|sp|P74467.1|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274257|dbj|BAK50744.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272223|dbj|BAL29742.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275393|dbj|BAL32911.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278563|dbj|BAL36080.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961461|dbj|BAM54701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|451781287|gb|AGF52256.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 202
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V +R PG +W+D++ L +ER+IF+GQ +++ +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI EA E+LR+R + + ++++T
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAREILRIRQQLNEIMAQRT 162
>gi|290489454|gb|ADD31111.1| clp protease proteolytic subunit protein [Berberidopsis corallina]
Length = 196
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KNLYLFINSPGGWVIPGVAIYDTMQFVRPNVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELLR+R+ + + +++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLRLRESLTRVYAQRT 162
>gi|148240100|ref|YP_001225487.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848639|emb|CAK24190.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 200
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLA G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLAAGTQGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G A+ QA DI EA E+LR+++ + F+++ + TD + F
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAQEILRMKEMLNRSMADMSGQSFEKIEKDTDRDYF 178
>gi|86608099|ref|YP_476861.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|115311344|sp|Q2JHM1.1|CLPP1_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86556641|gb|ABD01598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 203
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PGE QW+ L + LY+ER++FIG+ ID+ +N I+ MLYL+S D
Sbjct: 1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG VT +AIYDTM +K + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIVMYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI L P+ G +GQA DI A E LRV+ + + L++ T
Sbjct: 121 SRIMLHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTT 162
>gi|359422169|ref|YP_004935577.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Eleutherococcus senticosus]
gi|347448232|gb|AEO92644.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Eleutherococcus senticosus]
Length = 196
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ID E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAIDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + +KT
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQKT 162
>gi|317970581|ref|ZP_07971971.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 200
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSDDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ++ QA DI EA E+LR++D + ++ T
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRMKDMLNNSMAGMT 162
>gi|166368459|ref|YP_001660732.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|390438071|ref|ZP_10226569.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422301333|ref|ZP_16388701.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425436520|ref|ZP_18816955.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425442638|ref|ZP_18822879.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425447772|ref|ZP_18827754.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425450002|ref|ZP_18829834.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425455950|ref|ZP_18835661.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462515|ref|ZP_18841989.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425465071|ref|ZP_18844381.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|425470396|ref|ZP_18849266.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440753128|ref|ZP_20932331.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443664109|ref|ZP_21133359.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028168|emb|CAO89775.1| clpP [Microcystis aeruginosa PCC 7806]
gi|166090832|dbj|BAG05540.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389678721|emb|CCH92424.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389716257|emb|CCH99490.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389731601|emb|CCI04366.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389769363|emb|CCI05782.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792301|emb|CCI11972.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803100|emb|CCI17966.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824416|emb|CCI26621.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389832761|emb|CCI23365.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389838471|emb|CCI30693.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389883997|emb|CCI35668.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440177621|gb|ELP56894.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443331652|gb|ELS46298.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 199
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+ +++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGVPKVPYRLPGSQYEQWISIYSRLSVERILFLGQEVTDGLANALVAQMLYLDSEDPT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVVTICVGLAASMGAFLLASGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G R QA DI EA E+LR+R + + ++ +T
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAKEILRIRQQLNEIMANRT 162
>gi|108796785|ref|YP_636436.1| ATP-dependent Clp protease proteolytic subunit [Staurastrum
punctulatum]
gi|122211785|sp|Q32RU0.1|CLPP_STAPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393553|gb|AAX45694.1| proteolytic subunit 2 of clp protease [Staurastrum punctulatum]
Length = 201
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYRER++F+GQN+D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPRVPFRLPGEEEAVWVDVYNRLYRERLLFLGQNVDDEIANQLIGIMIYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDCITKVYVQRT 162
>gi|28202196|ref|NP_777437.1| ATP-dependent Clp protease proteolytic subunit [Anthoceros
formosae]
gi|41688497|sp|Q85BZ1.1|CLPP_ANTFO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27807898|dbj|BAC55373.1| ATP-dependent protease proteolytic subunit exon3 (chloroplast)
[Anthoceros formosae]
gi|27808041|dbj|BAC55470.1| ATP-dependent protease proteolytic subunit (chloroplast)
[Anthoceros formosae]
Length = 204
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARIMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 162
>gi|86605372|ref|YP_474135.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-3-3Ab]
gi|115311343|sp|Q2JWJ1.1|CLPP1_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86553914|gb|ABC98872.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 203
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PGE QW+ L + LY+ER++FIG+ ID+ +N I+ MLYL+S D
Sbjct: 1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG VT +AIYDTM +K + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIVMYINSPGGSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI L P+ G +GQA DI A E LRV+ + + L++ T
Sbjct: 121 SRIMLHQPSLGMIQGQASDIEIRARETLRVKRRMNELLAQMT 162
>gi|313183906|ref|YP_004021760.1| clp protease proteolytic subunit [Equisetum arvense]
gi|281371626|gb|ADA63559.1| clp protease proteolytic subunit (chloroplast) [Equisetum arvense]
gi|359751569|gb|AEV58363.1| clp protease proteolytic subunit [Equisetum arvense]
Length = 204
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E SNQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDLYLYINSPGGAVLPGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + GQA + EA+E+ ++RD I K ++T
Sbjct: 121 ARIMIHQPASSYYDGQAGECVLEAEEISKLRDCITKVYVQRT 162
>gi|372485823|gb|AEX96548.1| clp protease proteolytic subunit (chloroplast) [Allium fistulosum]
gi|372485825|gb|AEX96549.1| clp protease proteolytic subunit (chloroplast) [Allium cepa]
Length = 204
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELLR+R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLRLRETLTKVYVQRT 162
>gi|108773205|ref|YP_635771.1| ATP-dependent Clp protease proteolytic subunit [Chara vulgaris]
gi|122237366|sp|Q1ACH6.1|CLPP_CHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77157861|gb|ABA61902.1| proteolytic subunit 2 of clp protease [Chara vulgaris]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+ DDS
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDIYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++MYIN PGG V +A++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KEMFMYINSPGGSVVAGIAVFDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEGF 233
+R+ + PA + GQA + EA+E+L++RD I K +T G+
Sbjct: 121 ARVMIHQPASSYYDGQAGECLMEAEEVLKLRDCIAKVYMNRTGQPGW 167
>gi|114107157|ref|YP_740142.1| clp protease proteolytic subunit [Daucus carota]
gi|323149107|ref|YP_004222671.1| clp protease proteolytic subunit [Anthriscus cerefolium]
gi|122239962|sp|Q0G9T7.1|CLPP_DAUCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113200932|gb|ABI32448.1| clp protease proteolytic subunit [Daucus carota]
gi|289645600|gb|ADD13663.1| clp protease proteolytic subunit [Anthriscus cerefolium]
Length = 197
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + Q + EA+ELL++R+ + + ++TD
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTD 163
>gi|156573693|gb|ABU85179.1| clp protease proteolytic subunit [Anethum graveolens]
Length = 197
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + Q + EA+ELL++R+ + + ++TD
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTD 163
>gi|49574608|ref|NP_848084.2| ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris]
gi|68565049|sp|Q85FJ8.2|CLPP_ADICA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48476019|gb|AAP29415.2| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Adiantum capillus-veneris]
Length = 200
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+S D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K +++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITKVYAQRT 162
>gi|11467785|ref|NP_050836.1| ATP-dependent Clp protease proteolytic subunit [Nephroselmis
olivacea]
gi|18203460|sp|Q9TL09.1|CLPP_NEPOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5880714|gb|AAD54807.1|AF137379_30 proteolytic subunit 2 of clp protease (chloroplast) [Nephroselmis
olivacea]
Length = 208
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV YR PGE + QWVDL+N LYR+R++F+GQ + +E SNQ+ M+YL + D S
Sbjct: 1 MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++MYIN PGG VT L ++D + V T CVG A +A +L+GG G R A+P
Sbjct: 61 IPLFMYINSPGGSVTSGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P G +RGQA D+ E+ E+ R+RD + +T
Sbjct: 121 ARMMIHQPEGGSRGQASDVMYESSEVERLRDIVVDCYVERT 161
>gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383634|ref|ZP_11684482.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265220|gb|EHJ14013.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 200
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVSDGIANRIVALLLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSPAGAA--RGQADDIRNEADELLRVR 217
+RI + P G R QA DI EA+E+LR+R
Sbjct: 121 ARIMIHQPLGGTGGRRQATDIEIEANEILRIR 152
>gi|372485835|gb|AEX96554.1| clp protease proteolytic subunit (chloroplast) [Eucharis x
grandiflora]
Length = 204
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|283794992|ref|YP_003359383.1| ATP-dependent protease subunit (chloroplast) [Olea europaea]
gi|330850767|ref|YP_004376445.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334700306|ref|YP_004563805.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334701912|ref|YP_004564521.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. maroccana]
gi|281428711|gb|ADA69950.1| ATP-dependent protease subunit (chloroplast) [Olea europaea]
gi|291059277|gb|ADD72113.1| clp protease proteolytic subunit [Olea europaea]
gi|328795457|emb|CBR30339.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084425|emb|CBR23854.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334084511|emb|CBR24647.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084597|emb|CBR30431.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084888|emb|CBS29266.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. maroccana]
gi|334084974|emb|CBJ04322.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334085060|emb|CBR23763.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
Length = 196
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAVYDTMQFVRPDVHTICMGLAASMASFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|116617132|ref|YP_817507.1| clp protease proteolytic subunit [Coffea arabica]
gi|122153644|sp|A0A360.1|CLPP_COFAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116242188|gb|ABJ89703.1| clp protease proteolytic subunit [Coffea arabica]
Length = 196
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|372485890|gb|AEX96581.1| clp protease proteolytic subunit (chloroplast) [Brodiaea
californica]
gi|372485894|gb|AEX96583.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
congestum]
gi|372485896|gb|AEX96584.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
ida-maia]
Length = 204
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|139387277|ref|YP_001123398.1| ATP-dependent Clp protease proteolytic subunit [Capsella
bursa-pastoris]
gi|139390177|ref|YP_001123750.1| ATP-dependent Clp protease proteolytic subunit [Lobularia maritima]
gi|160380546|sp|A4QKL7.1|CLPP_CAPBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380557|sp|A4QLL9.1|CLPP_LOBMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286598|dbj|BAF50222.1| ATP-dependent protease subunit [Capsella bursa-pastoris]
gi|134286954|dbj|BAF50574.1| ATP-dependent protease subunit [Lobularia maritima]
Length = 196
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|372485827|gb|AEX96550.1| clp protease proteolytic subunit (chloroplast) [Gilliesia graminea]
Length = 204
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485819|gb|AEX96546.1| clp protease proteolytic subunit (chloroplast) [Manfreda virginica]
Length = 204
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485839|gb|AEX96556.1| clp protease proteolytic subunit (chloroplast) [Aphyllanthes
monspeliensis]
gi|372485876|gb|AEX96574.1| clp protease proteolytic subunit (chloroplast) [Eriospermum
cervicorne]
gi|372485882|gb|AEX96577.1| clp protease proteolytic subunit (chloroplast) [Ruscus aculeatus]
Length = 204
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|290489466|gb|ADD31117.1| clp protease proteolytic subunit protein [Heuchera sanguinea]
Length = 196
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|372485899|gb|AEX96585.1| clp protease proteolytic subunit (chloroplast) [Xanthorrhoea
preissii]
Length = 204
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485829|gb|AEX96551.1| clp protease proteolytic subunit (chloroplast) [Tulbaghia violacea]
gi|372485831|gb|AEX96552.1| clp protease proteolytic subunit (chloroplast) [Amaryllis
belladonna]
Length = 204
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485811|gb|AEX96542.1| clp protease proteolytic subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 204
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485833|gb|AEX96553.1| clp protease proteolytic subunit (chloroplast) [Crinum asiaticum]
Length = 204
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|284929271|ref|YP_003421793.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809715|gb|ADB95412.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 198
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+ Q + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLSQEVTDGIANRIVALLLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ ++S V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIFDTMQYIRSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+RI + P G R QA DI EA+E+LR+R + L+ K
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNNILATK 161
>gi|383930465|ref|YP_005089977.1| clpP gene product (chloroplast) [Brassica napus]
gi|262400762|gb|ACY66251.1| ATP-dependent Clp protease proteolytic subunit [Brassica napus]
Length = 196
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD+ N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIINRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q ++ EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRT 162
>gi|290489432|gb|ADD31100.1| clp protease proteolytic subunit protein [Antirrhinum majus]
Length = 196
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ++D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVVPGVAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|449326903|gb|AGE93480.1| clp protease proteolytic subunit [Xiphidium caeruleum]
Length = 204
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDNEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485888|gb|AEX96580.1| clp protease proteolytic subunit (chloroplast) [Androstephium
coeruleum]
Length = 204
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|374249562|ref|YP_005088832.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Millettia pinnata]
gi|356474851|gb|AET11369.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Millettia pinnata]
Length = 196
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG+G WVD++N LYRER++F+GQ +D + SNQ++ MLYL D+
Sbjct: 1 MPIGVPKVSFRTPGDGDASWVDIYNRLYRERLLFLGQEVDSQLSNQLIGIMLYLSIESDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +++N PGG V P LAI+DTMQ ++ V T C+G A + FLLA GE R A P
Sbjct: 61 KDLCLFVNSPGGWVIPGLAIFDTMQYIEPDVQTVCMGLAASMGSFLLAAGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + +++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFIREAEELLKLRETITRVYAQRT 162
>gi|434386913|ref|YP_007097524.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017903|gb|AFY93997.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 200
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M IG P V YR PG + QW+++++ L+RER+IF+ + +D +N I+A MLYLDS D S
Sbjct: 1 MSIGVPSVPYRLPGSTNEQWINIYDRLFRERIIFMFEEVDAGMANAIVAYMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG++T +AIYDT+Q +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGEITAGMAIYDTIQHIKSEVVTICVGLAASMGAFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+RI + P G R QA DI+ EA +L R + ++ + TD + F
Sbjct: 121 ARIMIHQPLGGTGRMQASDIQIEAKHILETRTLLNQLMADRSGQTLAQIEKDTDRDNF 178
>gi|372485849|gb|AEX96561.1| clp protease proteolytic subunit (chloroplast) [Asphodeline
damascena]
Length = 204
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEADAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYFFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485886|gb|AEX96579.1| clp protease proteolytic subunit (chloroplast) [Maianthemum
stellatum]
Length = 204
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTKVYVQRT 162
>gi|372485884|gb|AEX96578.1| clp protease proteolytic subunit (chloroplast) [Sansevieria
trifasciata]
Length = 195
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|159161186|ref|YP_001542472.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|148508469|gb|ABQ81476.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|227481143|emb|CAP62522.1| ATP-dependent protease proteolytic subunit [Ceratophyllum demersum]
Length = 202
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ID E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLYRERLLFLGQEIDSEMSNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVPPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|401879766|gb|AFQ30953.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Salvia miltiorrhiza]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTKVYVQRT 162
>gi|91214166|ref|YP_538790.1| ATP-dependent Clp protease proteolytic subunit [Glycine max]
gi|122202485|sp|Q2PMR0.1|CLPP_SOYBN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83595767|gb|ABC25148.1| clp protease proteolytic subunit [Glycine max]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++
Sbjct: 1 MPIGVPRVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKMRETITRVYVQRT 162
>gi|110456628|gb|ABG74755.1| ATP-dependent protease catalytic subunit [Forsythia europaea]
gi|290489438|gb|ADD31103.1| clp protease proteolytic subunit protein [Ehretia acuminata]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|372485878|gb|AEX96575.1| clp protease proteolytic subunit (chloroplast) [Liriope spicata]
Length = 205
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485880|gb|AEX96576.1| clp protease proteolytic subunit (chloroplast) [Ophiopogon
japonicus]
Length = 197
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|166235861|gb|ABY85762.1| ATP-dependent protease proteolytic subunit [Silene aegyptiaca]
gi|166235883|gb|ABY85783.1| ATP-dependent protease proteolytic subunit [Silene atocioides]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|166235773|gb|ABY85678.1| ATP-dependent protease proteolytic subunit [Silene sordida]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|290489440|gb|ADD31104.1| clp protease proteolytic subunit protein [Ilex cornuta]
Length = 196
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|372485841|gb|AEX96557.1| clp protease proteolytic subunit (chloroplast) [Asparagus
officinalis]
gi|372485843|gb|AEX96558.1| clp protease proteolytic subunit (chloroplast) [Asparagus
asparagoides]
gi|372485845|gb|AEX96559.1| clp protease proteolytic subunit (chloroplast) [Hemiphylacus
alatostylus]
gi|372485874|gb|AEX96573.1| clp protease proteolytic subunit (chloroplast) [Dasylirion
wheeleri]
Length = 204
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485809|gb|AEX96541.1| clp protease proteolytic subunit (chloroplast) [Agapanthus
africanus]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|290489458|gb|ADD31113.1| clp protease proteolytic subunit protein [Cornus florida]
Length = 196
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI+DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIFDTMQFVQPDVHTICMGMAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA A Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASAYYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|374249729|ref|YP_005089358.1| clpP gene product (chloroplast) [Silene vulgaris]
gi|166235619|gb|ABY85531.1| ATP-dependent protease proteolytic subunit [Silene uniflora]
gi|166235751|gb|ABY85657.1| ATP-dependent protease proteolytic subunit [Silene cryptoneura]
gi|166235839|gb|ABY85741.1| ATP-dependent protease proteolytic subunit [Silene schafta]
gi|166240002|gb|ABY86529.1| ATP-dependent protease proteolytic subunit [Heliosperma alpestre]
gi|329755711|gb|AEC04272.1| clp protease proteolytic subunit (chloroplast) [Silene vulgaris]
Length = 196
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|372485853|gb|AEX96563.1| clp protease proteolytic subunit (chloroplast) [Kniphofia
linearifolia]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485847|gb|AEX96560.1| clp protease proteolytic subunit (chloroplast) [Aloe vera]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|193237752|dbj|BAG50149.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
gi|193237765|dbj|BAG50156.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 162
>gi|372485851|gb|AEX96562.1| clp protease proteolytic subunit (chloroplast) [Haworthia
cymbiformis]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485892|gb|AEX96582.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
capitatum]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + E +ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEVEELLKLRETLTKVYVQRT 162
>gi|78103274|ref|YP_358605.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
gi|122213418|sp|Q3BAL3.1|CLPP_PHAAO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58802804|gb|AAW82524.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA D EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRT 162
>gi|456061794|ref|YP_007475986.1| clp protease proteolytic subunit [Bismarckia nobilis]
gi|449326468|gb|AGE93050.1| clp protease proteolytic subunit [Bismarckia nobilis]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485859|gb|AEX96566.1| clp protease proteolytic subunit (chloroplast) [Bowiea volubilis]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEIAKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|392841363|gb|AFM83318.1| clp protease proteolytic subunit (chloroplast) [Kingia australis]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372485863|gb|AEX96568.1| clp protease proteolytic subunit (chloroplast) [Ledebouria
cordifolia]
Length = 204
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|28261742|ref|NP_783256.1| ATP-dependent Clp protease proteolytic subunit [Atropa belladonna]
gi|75303626|sp|Q8S8W2.1|CLPP_ATRBE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|20068356|emb|CAC88069.1| ATP-dependent protease; catalytic subunit [Atropa belladonna]
Length = 196
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ I+ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA G Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMMHQPASGYYEAQTGEFVLEAEELLKLRETLTRVYVQRT 162
>gi|292559570|ref|YP_003540956.1| clpP-like protease [Phoenix dactylifera]
gi|290790978|gb|ADD63233.1| clpP-like protease (chloroplast) [Phoenix dactylifera]
gi|294620602|gb|ADF28171.1| clpP-like protease (chloroplast) [Phoenix dactylifera]
Length = 204
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|11466727|ref|NP_039323.1| ATP-dependent Clp protease proteolytic subunit [Marchantia
polymorpha]
gi|116525|sp|P12208.1|CLPP_MARPO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|456519|emb|CAA28109.1| unnamed protein product [Marchantia polymorpha]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 162
>gi|161784217|ref|YP_001595533.1| ATP-dependent protease proteolytic subunit [Lemna minor]
gi|88696795|gb|ABD48520.1| ATP-dependent protease proteolytic subunit [Lemna minor]
Length = 202
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|139389121|ref|YP_001123839.1| ATP-dependent Clp protease proteolytic subunit [Nasturtium
officinale]
gi|160380558|sp|A4QLV8.1|CLPP_NASOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134287044|dbj|BAF50663.1| ATP-dependent protease subunit [Nasturtium officinale]
Length = 196
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +A+YDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAVYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL+VR+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKVRETITRVYVQRT 162
>gi|166235817|gb|ABY85720.1| ATP-dependent protease proteolytic subunit [Silene pseudoatocion]
Length = 196
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|119368524|ref|YP_913212.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
gi|125863802|sp|A0ZZ60.1|CLPP_GOSBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119224886|dbj|BAF41272.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
Length = 196
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 162
>gi|377819404|ref|YP_005097899.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
gi|340536665|gb|AEK48432.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
gi|340536752|gb|AEK48518.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
Length = 202
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|295311752|ref|YP_003587490.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
gi|281188266|gb|ACT83132.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
Length = 203
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|91208926|ref|YP_538961.1| ATP-dependent Clp protease proteolytic subunit [Gossypium hirsutum]
gi|372291056|ref|YP_005087814.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium darwinii]
gi|372291410|ref|YP_005088305.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium tomentosum]
gi|372291508|ref|YP_005088401.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|372291798|ref|YP_005088941.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium mustelinum]
gi|372291882|ref|YP_005089024.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium arboreum]
gi|386800862|ref|YP_006303516.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium gossypioides]
gi|394830651|ref|YP_006503302.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium incanum]
gi|394830824|ref|YP_006503468.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium capitis-viridis]
gi|394831000|ref|YP_006503634.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium robinsonii]
gi|122201402|sp|Q2L926.1|CLPP_GOSHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85687440|gb|ABC73652.1| clp protease proteolytic subunit [Gossypium hirsutum]
gi|318084341|gb|ADV38817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium arboreum]
gi|318084424|gb|ADV38899.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium darwinii]
gi|318084509|gb|ADV38983.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|318084593|gb|ADV39066.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium mustelinum]
gi|318084761|gb|ADV39232.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium tomentosum]
gi|329317096|gb|AEB90455.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium gossypioides]
gi|329317180|gb|AEB90538.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium hirsutum]
gi|329317264|gb|AEB90621.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium hirsutum]
gi|329317348|gb|AEB90704.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|329317432|gb|AEB90787.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|329317516|gb|AEB90870.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|335354356|gb|AEH42976.1| ATP-dependent Clp protease proteolytic subunit [Gossypium incanum]
gi|335354524|gb|AEH43142.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium capitis-viridis]
gi|335354692|gb|AEH43308.1| ATP-dependent Clp protease proteolytic subunit [Gossypium
robinsonii]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 162
>gi|290489448|gb|ADD31108.1| clp protease proteolytic subunit protein [Nerium oleander]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|18860336|ref|NP_569653.1| ATP-dependent Clp protease proteolytic subunit [Psilotum nudum]
gi|22653694|sp|Q8WHZ7.1|CLPP_PSINU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18389489|dbj|BAB84241.1| ATP-dependent protease [Psilotum nudum]
gi|441018042|gb|AGC26818.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Psilotum nudum]
Length = 198
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN PGG V P +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 RDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + GQA + EA+E+L++RD I + +++T+
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEILKLRDCITRVYAQRTE 163
>gi|371926699|gb|AEX58480.1| clp protease proteolytic subunit (chloroplast) [Theobroma
grandiflorum]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|139388935|ref|YP_001123662.1| ATP-dependent Clp protease proteolytic subunit [Lepidium
virginicum]
gi|160380556|sp|A4QLD1.1|CLPP_LEPVR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286865|dbj|BAF50486.1| ATP-dependent protease subunit [Lepidium virginicum]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ++D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|290489436|gb|ADD31102.1| clp protease proteolytic subunit protein [Dillenia indica]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDNEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDT+Q ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTIQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|7525058|ref|NP_051083.1| ATP-dependent Clp protease proteolytic subunit [Arabidopsis
thaliana]
gi|5360576|dbj|BAA82063.1| pClpP [Arabidopsis thaliana]
gi|5881719|dbj|BAA84410.1| ATP-dependent protease subunit [Arabidopsis thaliana]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|153805564|ref|YP_001382140.1| ATP-dependent Clp protease proteolytic subunit [Leptosira
terrestris]
gi|160380555|sp|A6YG63.1|CLPP_LEPTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134270095|gb|ABO69284.1| proteolytic subunit 2 of clp protease [Leptosira terrestris]
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 107/161 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV Y P E W+DL++ LY+ER+I I ++++E NQI++ ++YL + DDS
Sbjct: 1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++YIN PGG VT +AIYD M+ +PV T VG + +A F+LAGG+ G R A P
Sbjct: 61 KEFFIYINSPGGSVTSGIAIYDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G + GQ+ +I +EA E++R+R + + +++T
Sbjct: 121 SRIMIHQPEGGSEGQSSEIVHEAQEVVRIRRQVARIYAQRT 161
>gi|160332321|sp|P56772.2|CLPP1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase ClpP1; Short=pClpP
Length = 196
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|11465983|ref|NP_054525.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana tabacum]
gi|78102563|ref|YP_358703.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
sylvestris]
gi|81301593|ref|YP_398889.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
tomentosiformis]
gi|351653910|ref|YP_004891632.1| clpP gene product (chloroplast) [Nicotiana undulata]
gi|116527|sp|P12210.1|CLPP_TOBAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122212889|sp|Q33C07.1|CLPP_NICTO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122213564|sp|Q3C1K4.1|CLPP_NICSY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1143166|gb|AAA84867.1| ClpP protease [Nicotiana tabacum]
gi|2924270|emb|CAA77422.1| ATP-dependent protease proteolytic subuni [Nicotiana tabacum]
gi|77799590|dbj|BAE46679.1| ATP-dependent protease proteolytic subunit [Nicotiana sylvestris]
gi|80750952|dbj|BAE48028.1| ATP-dependent protease proteolytic subunit [Nicotiana
tomentosiformis]
gi|347453936|gb|AEO95594.1| clp protease proteolytic subunit (chloroplast) [Nicotiana undulata]
gi|347454047|gb|AEO95704.1| clp protease proteolytic subunit [synthetic construct]
Length = 196
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRT 162
>gi|139388119|ref|YP_001123311.1| ATP-dependent protease subunit [Barbarea verna]
gi|139389443|ref|YP_001123140.1| ATP-dependent Clp protease proteolytic subunit [Olimarabidopsis
pumila]
gi|139389826|ref|YP_001123487.1| ATP-dependent Clp protease proteolytic subunit [Crucihimalaya
wallichii]
gi|404474636|ref|YP_006666317.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pachycladon enysii]
gi|160380544|sp|A4QKD0.1|CLPP_BARVE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380548|sp|A4QKV6.1|CLPP_CRUWA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380560|sp|A4QJV6.1|CLPP_OLIPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286337|dbj|BAF49964.1| ATP-dependent protease subunit [Olimarabidopsis pumila]
gi|134286510|dbj|BAF50135.1| ATP-dependent protease subunit [Barbarea verna]
gi|134286688|dbj|BAF50311.1| ATP-dependent protease subunit [Crucihimalaya wallichii]
gi|401786751|gb|AFQ07817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pachycladon enysii]
Length = 196
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|296936697|gb|ADH94369.1| photosystem II CP47 chlorophyll apoprotein [Syzygium cumini]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|52220834|ref|YP_086990.1| ATP-dependent Clp protease proteolytic subunit [Panax ginseng]
gi|68052101|sp|Q68RY2.1|CLPP_PANGI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51235337|gb|AAT98533.1| ATP-dependent protease; catalytic subunit [Panax ginseng]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + +KT
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKT 162
>gi|372485861|gb|AEX96567.1| clp protease proteolytic subunit (chloroplast) [Drimia altissima]
gi|372485865|gb|AEX96569.1| clp protease proteolytic subunit (chloroplast) [Ornithogalum
tenuifolium]
Length = 204
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINTPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|13518463|ref|NP_084822.1| ATP-dependent Clp protease proteolytic subunit [Lotus japonicus]
gi|18202721|sp|Q9BBQ9.1|CLPP_LOTJA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13359004|dbj|BAB33221.1| ATP-dependent protease subunit [Lotus japonicus]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDK 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|11466963|ref|NP_054384.1| ATP-dependent Clp protease proteolytic subunit [Epifagus
virginiana]
gi|231812|sp|P30063.1|CLPP_EPIVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|336919|gb|AAA65858.1| protease [Epifagus virginiana]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ PGE WVD++N LYRER++F+GQ +D + SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 61 KEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA G Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|313199727|ref|YP_004021341.1| clp protease proteolytic subunit [Theobroma cacao]
gi|309321291|gb|ADO64834.1| clp protease proteolytic subunit [Theobroma cacao]
gi|328924805|gb|ADO64915.2| clp protease proteolytic subunit [Theobroma cacao]
gi|371925961|gb|AEX57751.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926043|gb|AEX57832.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926125|gb|AEX57913.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926207|gb|AEX57994.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926289|gb|AEX58075.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926371|gb|AEX58156.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926453|gb|AEX58237.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926535|gb|AEX58318.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926617|gb|AEX58399.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926781|gb|AEX58561.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG + P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWIIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|139389975|ref|YP_001123575.1| ATP-dependent protease subunit [Draba nemorosa]
gi|160380553|sp|A4QL44.1|CLPP_DRANE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286777|dbj|BAF50399.1| ATP-dependent protease subunit [Draba nemorosa]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+EL+++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELIKIRETITRVYVQRT 162
>gi|334701643|ref|YP_004564028.1| ATP-dependent Clp protease proteolytic subunit [Olea woodiana
subsp. woodiana]
gi|334084683|emb|CBS29376.1| ATP-dependent Clp protease proteolytic subunit [Olea woodiana
subsp. woodiana]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYD+MQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDSMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|456330916|ref|YP_007475900.1| clp protease proteolytic subunit [Calamus caryotoides]
gi|449326381|gb|AGE92964.1| clp protease proteolytic subunit [Calamus caryotoides]
Length = 204
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ ID E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEIDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|394830738|ref|YP_006503385.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium somalense]
gi|394830913|ref|YP_006503551.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium areysianum]
gi|335354440|gb|AEH43059.1| ATP-dependent Clp protease proteolytic subunit [Gossypium
somalense]
gi|335354608|gb|AEH43225.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium areysianum]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVHPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 162
>gi|108802666|ref|YP_636324.1| ATP-dependent Clp protease proteolytic subunit [Eucalyptus globulus
subsp. globulus]
gi|122219170|sp|Q49KX3.1|CLPP_EUCGG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60460832|gb|AAX21052.1| photosystem II CP47 chlorophyll apoprotein [Eucalyptus globulus
subsp. globulus]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|372485867|gb|AEX96570.1| clp protease proteolytic subunit (chloroplast) [Oziroe biflora]
Length = 204
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 VRVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTKVYVQRT 162
>gi|149390466|ref|YP_001294295.1| clp protease proteolytic subunit [Illicium oligandrum]
gi|160380554|sp|A6MMW9.1|CLPP_ILLOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|147917419|gb|ABQ52543.1| clp protease proteolytic subunit [Illicium oligandrum]
Length = 202
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + FLLAGGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + +++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYAQRT 162
>gi|91984016|ref|YP_567102.1| ATP-dependent Clp protease proteolytic subunit [Vitis vinifera]
gi|122230336|sp|Q0ZIZ4.1|CLPP_VITVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91701674|gb|ABE47558.1| clp protease proteolytic subunit [Vitis vinifera]
Length = 196
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ ++ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ + V T C+G A + F+L GG R A P
Sbjct: 61 KDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA A QA + EA+ELL++R+ I K ++T
Sbjct: 121 ARVMIHQPAAAFYEAQAGEFVMEAEELLKLREIITKVYVQRT 162
>gi|449326642|gb|AGE93222.1| clp protease proteolytic subunit [Calectasia narragara]
Length = 204
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|377829899|ref|YP_005296125.1| clpP gene product (chloroplast) [Pentactina rupicola]
gi|371532647|gb|AEX31757.1| clp protease proteolytic subunit (chloroplast) [Pentactina
rupicola]
Length = 196
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDVYNRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|290489446|gb|ADD31107.1| clp protease proteolytic subunit protein [Nelumbo nucifera]
Length = 202
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|456061910|ref|YP_007476072.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
gi|449326555|gb|AGE93136.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
Length = 204
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|456061475|ref|YP_007475644.1| clp protease proteolytic subunit [Heliconia collinsiana]
gi|449326122|gb|AGE92708.1| clp protease proteolytic subunit [Heliconia collinsiana]
Length = 204
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|394831126|ref|YP_006503816.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Datura stramonium]
gi|350996451|gb|AEQ36963.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Datura stramonium]
gi|350996537|gb|AEQ37048.1| ATP-dependent Clp protease proteolytic subunit [Datura stramonium]
Length = 198
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPGE WVD++N LYRER++F+GQ I E SNQ++A M+YL D++
Sbjct: 1 MPIGVPKVPFRTPGEEESSWVDIYNRLYRERLLFLGQGITSELSNQLIALMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVLPGVAIYDTMQFVRPDVHTVCIGLAASMGSFILVGGEITKRIAFPH 120
Query: 187 -LSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + P G R Q + EA ELL++R+ + + ++T
Sbjct: 121 AIIRVMMHQPGTGYYRAQVGEFILEAAELLKLRETLTRVYVQRT 164
>gi|456061682|ref|YP_007475814.1| clp protease proteolytic subunit [Pseudophoenix vinifera]
gi|449326294|gb|AGE92878.1| clp protease proteolytic subunit [Pseudophoenix vinifera]
Length = 204
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|167391831|ref|YP_001671708.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
gi|166344158|gb|ABY86808.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 196
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQVGEFILEAEELLKLRETLTRVYVQRT 162
>gi|372485837|gb|AEX96555.1| clp protease proteolytic subunit (chloroplast) [Scadoxus
cinnabarinus]
Length = 204
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDYT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|443267251|ref|YP_007374823.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ophioglossum californicum]
gi|441017952|gb|AGC26736.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ophioglossum californicum]
Length = 204
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLHRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + F+ GGE R A+P
Sbjct: 61 KNMYSYINSPGGAVLPGISIYDAMQFVVPDVHTICMGLAASMGSFISTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K +++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYAQRT 162
>gi|60117170|ref|YP_209504.1| ATP-dependent Clp protease proteolytic subunit [Huperzia lucidula]
gi|68052074|sp|Q5SD28.1|CLPP_HUPLU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50659978|gb|AAT80700.1| ATP-dependent protease (chloroplast) [Huperzia lucidula]
Length = 209
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ W+D++N L+RER++F+GQ +D+E +NQ++ M+Y + DDS
Sbjct: 1 MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+Y+N PGG V ++IYD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVLAGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQ + EA+E+L++RD I K +++T
Sbjct: 121 ARVMIHQPASSYYEGQVGECIMEAEEVLKIRDCITKVYAQRT 162
>gi|158187126|gb|ABW22759.1| clp protease proteolytic subunit [Phaseolus vulgaris]
Length = 196
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +RTPG+ WVD++N LYRER++F+GQ++D E SNQ+++ M+YL ++
Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDIYNRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKMRETITRVYVQRT 162
>gi|290489476|gb|ADD31122.1| clp protease proteolytic subunit protein [Staphylea colchica]
Length = 196
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V ++ PGEG W+D++N LYRER++F+GQ +D SN ++A M+YL D+
Sbjct: 1 MPIGVPRVPFQLPGEGFVSWIDIYNRLYRERLLFLGQMVDTVISNHLIALMVYLTLESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+GFA + FLL GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVMPGIAIYDTMQFVRPDVQTICMGFAASMGSFLLVGGKITKRIAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA A G Q + EA+ELL++R+ + +++T
Sbjct: 121 ARVMIHQPAAAFYGAQTGEFVLEAEELLKLREIMTSIYAQRT 162
>gi|404474550|ref|YP_006666055.1| clp protease proteolytic subunit (chloroplast) [Capsicum annuum]
gi|401065957|gb|AFP90801.1| clp protease proteolytic subunit (chloroplast) [Capsicum annuum]
Length = 196
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + WVD++N LYRER++F+GQ I+ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRGPGEANPLWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGVAIYDTMQFVRPDVNTVCMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRD 218
+R+ + PA G Q + EA+ELL++R+
Sbjct: 121 ARVMMHQPASGFYMAQVTECVVEAEELLKLRE 152
>gi|108796681|ref|YP_636469.1| ATP-dependent Clp protease proteolytic subunit [Zygnema
circumcarinatum]
gi|122211761|sp|Q32RQ7.1|CLPP_ZYGCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393665|gb|AAX45807.1| proteolytic subunit 2 of clp protease [Zygnema circumcarinatum]
Length = 211
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYR+R++F+GQ++D+E +NQ++ M+YL+ + S
Sbjct: 1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L+++D + K ++T
Sbjct: 121 ARVMIHQPASSFYEGQAGECMIEAEEVLKLKDCVTKVYMQRT 162
>gi|139389289|ref|YP_001123055.1| ATP-dependent protease subunit [Aethionema grandiflorum]
gi|139390373|ref|YP_001122971.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|160380540|sp|A4QJE0.1|CLPP_AETCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380541|sp|A4QJM4.1|CLPP_AETGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286166|dbj|BAF49795.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|134286251|dbj|BAF49879.1| ATP-dependent protease subunit [Aethionema grandiflorum]
Length = 196
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|166235685|gb|ABY85594.1| ATP-dependent protease proteolytic subunit [Silene integripetala]
Length = 196
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|166235597|gb|ABY85510.1| ATP-dependent protease proteolytic subunit [Silene littorea]
Length = 196
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVESEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRXTLTRVYVQRT 162
>gi|290489474|gb|ADD31121.1| clp protease proteolytic subunit protein [Quercus nigra]
Length = 196
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + A + EA+E++++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAEEMMKLRETITRVYVQRT 162
>gi|449326729|gb|AGE93308.1| clp protease proteolytic subunit [Chamaedorea seifrizii]
Length = 204
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDAT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|166235575|gb|ABY85489.1| ATP-dependent protease proteolytic subunit [Silene samia]
Length = 196
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|149390564|ref|YP_001294209.1| clp protease proteolytic subunit [Buxus microphylla]
gi|160380545|sp|A6MM61.1|CLPP_BUXMI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146762309|gb|ABQ45273.1| clp protease proteolytic subunit [Buxus microphylla]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + + T C+G A + FLL GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRT 162
>gi|114329994|ref|YP_740675.1| clp protease proteolytic subunit [Nandina domestica]
gi|122165937|sp|Q09FT6.1|CLPP_NANDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054496|gb|ABI49889.1| clp protease proteolytic subunit [Nandina domestica]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRT 162
>gi|290489478|gb|ADD31123.1| clp protease proteolytic subunit protein [Trochodendron aralioides]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ++D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|110227104|ref|YP_665583.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|134093226|ref|YP_001109527.1| ATP-dependent Clp protease proteolytic subunit [Populus
trichocarpa]
gi|122224626|sp|Q14FD2.1|CLPP_POPAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380562|sp|A4GYT6.1|CLPP_POPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109945542|dbj|BAE97230.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|133712088|gb|ABO36731.1| ATP-dependent CLP protease proteolytic subunit [Populus
trichocarpa]
Length = 196
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + +
Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P A Q + EA+ELL++R+ + + +++T
Sbjct: 121 ARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRT 162
>gi|334362075|ref|YP_004564128.1| clp protease proteolytic subunit [Nelumbo nucifera]
gi|224474248|gb|ACN49434.1| clp protease proteolytic subunit [Nelumbo nucifera]
gi|383286822|gb|AFH01472.1| clp protease proteolytic subunit (chloroplast) [Nelumbo nucifera]
Length = 202
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVINRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|290489470|gb|ADD31119.1| clp protease proteolytic subunit protein [Oxalis latifolia]
Length = 195
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG W+D++N LYRERV+F+GQ +D SNQ++A MLYL S ++
Sbjct: 1 MPIGVPKVPFRTPGYRRKSWIDIYNRLYRERVLFLGQGVDSTISNQLIALMLYL-SHENE 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ ++ + T C+GFA + FLL GG R A P
Sbjct: 60 KDLYFFINSPGGWVIPGIAIYDTMQFVRPDIQTICMGFAASMGSFLLVGGAITKRLAFPH 119
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA GQ ++ EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPAAIFFGGQVTEVILEAEELLKLREILTRVYAQRT 161
>gi|11466349|ref|NP_038352.1| ATP-dependent Clp protease proteolytic subunit [Mesostigma viride]
gi|12229759|sp|Q9MUV8.1|CLPP_MESVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7259492|gb|AAF43793.1|AF166114_5 proteolytic subunit 2 of clp protease (chloroplast) [Mesostigma
viride]
Length = 229
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE +VD++N LYRER++F+G+++D+E +NQ++ M++L+S DD+
Sbjct: 1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ YIN PGG + L +YD +Q + V T C+G A +A F+LAGG G R P
Sbjct: 61 KGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ L P G G+A + E+ E+ R+R+ I ++T
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRT 161
>gi|124112049|ref|YP_001019072.1| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
gi|160380575|sp|Q19VC3.2|CLPP_CHLAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124012165|gb|ABD62181.2| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
Length = 225
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 105/161 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE +VD++N LYRER++F+G+++D+E +NQ++ M++L+S DD+
Sbjct: 1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ YIN PGG + L +YD +Q + V T C+G A +A F+LAGG G R P
Sbjct: 61 KGIFFYINSPGGSMNSGLGVYDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ L P G G+A + E+ E+ R+R+ I +++T
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYAKRT 161
>gi|166235641|gb|ABY85552.1| ATP-dependent protease proteolytic subunit [Silene zawadskii]
Length = 196
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|69214843|gb|AAZ03804.1| ATP-depedent Clp protease proteolytic subunit [Yucca schidigera]
gi|374411876|gb|AEZ48922.1| clp protease proteolytic subunit, partial [Hesperaloe parviflora]
gi|374411878|gb|AEZ48923.1| clp protease proteolytic subunit, partial [Hosta ventricosa]
Length = 195
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|114804289|ref|YP_762286.1| clp protease proteolytic subunit [Morus indica]
gi|122166780|sp|Q09WZ2.1|CLPP_MORIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78100341|gb|ABB20982.1| clp protease proteolytic subunit [Morus indica]
Length = 196
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD+ N LYRER++F+GQ +D E SNQ++ M++L DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 162
>gi|427418188|ref|ZP_18908371.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760901|gb|EKV01754.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 198
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 12/178 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + + + +N I+A MLYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGSTYEQWISIYERLFRERIIFLTEEVTDGIANAIVAYMLYLDSDDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTM+ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMRYIKSEVVTICVGLAASMGSFLLCAGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVR-----------DYIFKELSRKTDYEGF 233
SRI + P G + QA DI EA+ +++++ + +++ R TD + F
Sbjct: 121 SRIMIHQPLGGVGQRQATDIEIEANHIVQIKHRLNSLMAEHTNQTIEQVERDTDRDNF 178
>gi|372290997|ref|YP_005087718.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium raimondii]
gi|318084715|gb|ADV39187.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium raimondii]
Length = 196
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 162
>gi|166235663|gb|ABY85573.1| ATP-dependent protease proteolytic subunit [Silene sorensenis]
Length = 196
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|317046198|ref|YP_004072487.1| ATP-dependent protease [Corynocarpus laevigata]
gi|309252915|gb|ADO60335.1| ATP-dependent protease [Corynocarpus laevigata]
Length = 195
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG+ W+D++N LYRER++F+GQ +D E SNQ++A M+YL + ++
Sbjct: 1 MPIGVPKVPFRTPGDEDASWIDIYNRLYRERLLFLGQAVDSEISNQLIALMVYLSTESET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG R A+P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTVCLGLAASMGSFILVGGAITKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRD 218
+R+ + P+ A Q + EA+ELL++R+
Sbjct: 121 ARVMIHQPSSAFYEAQTGEFILEAEELLKLRE 152
>gi|34501388|ref|NP_904176.1| ATP-dependent Clp protease proteolytic subunit [Physcomitrella
patens subsp. patens]
gi|68052159|sp|Q6YXM7.1|CLPP_PHYPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34494758|dbj|BAC85025.1| ATP-dependent protease proteolytic subunit [Physcomitrella patens
subsp. patens]
Length = 199
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWN-ALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y+YIN PGG V +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 NKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALP 120
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFK 222
+R+ + PA + GQA + EA+E+L++RDYI +
Sbjct: 121 HARVMIHQPASSYYDGQAGECIMEAEEVLKLRDYITR 157
>gi|452822047|gb|EME29070.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 273
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 4/186 (2%)
Query: 44 YGRVHKSLYSGIR-NDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFI 102
+ R +SL + R ++ RG I M G PKV Y+ PG+ +++++D++N YRER+I++
Sbjct: 36 FSRFGESLSNCKRQHNYSTRGNIVMGG-GVPKVPYKAPGQQNYEFIDIFNRFYRERIIYV 94
Query: 103 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC 162
GQ IDE+ +NQI+A +L+L S DD V MYIN PGG VTP LA+YD M S++ P+ T
Sbjct: 95 GQEIDEDQANQIIAILLFLQSEDDQAEVQMYINCPGGFVTPGLAVYDCMCSVRYPIVTVN 154
Query: 163 VGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA--ARGQADDIRNEADELLRVRDYI 220
+G A + FL A G G R A+P SR L P +GQA D+ EA ++LR R+ +
Sbjct: 155 LGMAASMGAFLAAAGTPGRRFALPNSRYLLQQPLAPDNIKGQAKDVEIEAVQILRQREML 214
Query: 221 FKELSR 226
F+ ++
Sbjct: 215 FESYAK 220
>gi|374411862|gb|AEZ48916.1| clp protease proteolytic subunit, partial [Chlorophytum
rhizopendulum]
Length = 194
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D E SNQ++ M++L DD+
Sbjct: 1 MPIGVPKVPFRVPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVFLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQLVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|374411912|gb|AEZ48940.1| clp protease proteolytic subunit, partial [Sparganium eurycarpum]
Length = 195
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|383930606|ref|YP_005352976.1| clpP gene product (chloroplast) [Mankyua chejuensis]
gi|325975872|gb|ADZ48008.1| clp protease proteolytic subunit [Mankyua chejuensis]
Length = 202
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD+ N LYRER++F+GQ +D+E +NQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGDEDAGWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDDN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN PGG V P ++IYD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 RNMYSYINSPGGAVLPGISIYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K +++T
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYAQRT 161
>gi|306486008|gb|ADM92652.1| clp protease proteolytic subunit protein [Davidia involucrata]
Length = 195
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPASSYYEAQTGEFILEAEELLKLRETLTRVYAQRT 161
>gi|223931051|ref|YP_002586911.1| clp protease proteolytic subunit (chloroplast) [Syntrichia ruralis]
gi|219562265|gb|ACL27596.1| clp protease proteolytic subunit (chloroplast) [Syntrichia ruralis]
Length = 197
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 106/156 (67%), Gaps = 2/156 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFK 222
+R+ + PA + GQA + EA+E+L++RDYI +
Sbjct: 120 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDYITR 155
>gi|442742987|ref|YP_007353939.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438687628|emb|CCP47155.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438688312|emb|CCP47244.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438688436|emb|CCP47333.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
Length = 195
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|290489468|gb|ADD31118.1| clp protease proteolytic subunit protein [Liquidambar styraciflua]
Length = 196
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ I+ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEINSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG + P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWLIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGKITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P + Q + EA+ELL++R+ I + +++T
Sbjct: 121 ARVMIHQPGSSYFEAQTGEFILEAEELLKLRETITRVYAQRT 162
>gi|114329772|ref|YP_740590.1| clp protease proteolytic subunit [Platanus occidentalis]
gi|122166011|sp|Q09G21.1|CLPP_PLAOC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054410|gb|ABI49804.1| clp protease proteolytic subunit [Platanus occidentalis]
Length = 202
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|359422286|ref|YP_004935691.1| clpP gene product (chloroplast) [Sesamum indicum]
gi|347448320|gb|AEO92731.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Sesamum indicum]
Length = 196
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRIPGEEDASWVDVYNRLYRERLLFLGQEVQSEISNQLMGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V + IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVGIYDTMQFVRPDVHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + +T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKIRETLTRVYVERT 162
>gi|372485817|gb|AEX96545.1| clp protease proteolytic subunit (chloroplast) [Hosta ventricosa]
Length = 211
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 107/169 (63%), Gaps = 8/169 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 187 ------LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 AYVISNIIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 169
>gi|392841427|gb|AFM83381.1| clp protease proteolytic subunit (chloroplast) [Corallorhiza
striata var. vreelandii]
Length = 210
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++N L+RER++F+GQ+++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDAVWIDVYNRLHRERLLFLGQHVNSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + + + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSTDIHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPGSYFYESQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|383931214|ref|YP_006073129.1| clp protease proteolytic subunit (chloroplast) [Elaeis guineensis]
gi|325305732|gb|ADZ10893.1| clp protease proteolytic subunit (chloroplast) [Elaeis guineensis]
Length = 204
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RE ++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGIPKVPFRSPGEEDAIWVDVYNRLHREGLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 162
>gi|372000217|gb|AEX65185.1| ATP-dependent Clp protease proteolytic subunit [Mollugo
verticillata]
Length = 195
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|81176276|ref|YP_398353.1| ATP-dependent Clp protease proteolytic subunit [Lactuca sativa]
gi|452849076|ref|YP_007474754.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
gi|122212017|sp|Q332V2.1|CLPP_LACSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78675194|dbj|BAE47620.1| ATP-dependent clp protease proteolytic subunit [Lactuca sativa]
gi|88657007|gb|ABD47257.1| clp protease proteolytic subunit [Lactuca sativa]
gi|372863231|gb|AEX99303.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
Length = 196
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKT 228
+R+ + PAG+ A + E ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRT 162
>gi|374411854|gb|AEZ48912.1| clp protease proteolytic subunit, partial [Asparagus officinalis]
gi|374411896|gb|AEZ48932.1| clp protease proteolytic subunit, partial [Nolina atopocarpa]
Length = 195
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|306486010|gb|ADM92653.1| clp protease proteolytic subunit protein [Franklinia alatamaha]
Length = 197
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG PKV +R+PGE WVD L N LYRER++F+GQ +D E SNQ++ M+YL DD
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVLINRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDD 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 TKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 HARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 163
>gi|374411888|gb|AEZ48928.1| clp protease proteolytic subunit [Lomandra longifolia]
Length = 203
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|166201959|gb|ABY84433.1| ATP-dependent protease proteolytic subunit [Silene flos-jovis]
Length = 196
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD++N LYRER++F+GQ ++ E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVYNRLYRERLLFLGQEVESEISNQIIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V + IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGSVISGVGIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|435856398|ref|YP_007317273.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Camellia sinensis]
gi|430728297|gb|AGA55621.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Camellia sinensis]
Length = 195
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWIDV-NRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|374411848|gb|AEZ48909.1| clp protease proteolytic subunit [Agapanthus praecox]
Length = 203
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|69214841|gb|AAZ03803.1| ATP-depedent Clp protease proteolytic subunit [Typha latifolia]
gi|374411858|gb|AEZ48914.1| clp protease proteolytic subunit, partial [Brocchinia micrantha]
gi|374411873|gb|AEZ48921.1| clp protease proteolytic subunit, partial [Fosterella caulescens]
gi|374411884|gb|AEZ48926.1| clp protease proteolytic subunit, partial [Kingia australis]
gi|374411890|gb|AEZ48929.1| clp protease proteolytic subunit, partial [Navia saxicola]
gi|374411894|gb|AEZ48931.1| clp protease proteolytic subunit, partial [Neoregelia carolinae]
gi|374411902|gb|AEZ48935.1| clp protease proteolytic subunit, partial [Pitcairnia feliciana]
gi|374411906|gb|AEZ48937.1| clp protease proteolytic subunit, partial [Puya laxa]
Length = 195
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|385153457|ref|YP_006073290.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Phalaenopsis equestris]
gi|329668822|gb|AEB96269.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Phalaenopsis equestris]
Length = 203
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA D EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRT 161
>gi|139389667|ref|YP_001123224.1| ATP-dependent protease subunit [Arabis hirsuta]
gi|160380543|sp|A4QK43.1|CLPP_ARAHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286422|dbj|BAF50048.1| ATP-dependent protease subunit [Arabis hirsuta]
Length = 196
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T +G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKIRETITRVYVQRT 162
>gi|290489434|gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba japonica]
Length = 198
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 S--RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 AQIRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 164
>gi|374411900|gb|AEZ48934.1| clp protease proteolytic subunit, partial [Phormium tenax]
Length = 195
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|441403318|ref|YP_007353791.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum x morifolium]
gi|372863470|gb|AEX99539.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
gi|375298861|gb|AFA45300.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum x morifolium]
Length = 196
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKT 228
R+ + PAG+ A + E ELL++R+ + + ++T
Sbjct: 121 VRVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRT 162
>gi|342316398|ref|YP_004769971.1| clp protease proteolytic subunit (chloroplast) [Wolffia
australiana]
gi|341834263|gb|AEK94532.1| clp protease proteolytic subunit [Wolffia australiana]
Length = 201
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 161
>gi|289065114|ref|YP_003434000.1| clp protease proteolytic subunit [Typha latifolia]
gi|281371797|gb|ADA63724.1| clp protease proteolytic subunit [Typha latifolia]
Length = 203
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|342316144|ref|YP_004769653.1| clp protease proteolytic subunit (chloroplast) [Spirodela
polyrhiza]
gi|341834094|gb|AEK94365.1| clp protease proteolytic subunit [Spirodela polyrhiza]
Length = 201
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 161
>gi|290489462|gb|ADD31115.1| clp protease proteolytic subunit protein [Ficus sp. Moore 315]
Length = 208
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ W+D++N LYRER++F+GQ I E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDALWIDIYNRLYRERLLFLGQPITSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFLNSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + +++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYAQRT 162
>gi|308742621|gb|ADO33472.1| clp protease proteolytic subunit [Smilax china]
Length = 204
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ I K ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETITKVYVQRT 162
>gi|372000219|gb|AEX65186.1| ATP-dependent Clp protease proteolytic subunit [Portulacaria afra]
Length = 195
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|372000215|gb|AEX65184.1| ATP-dependent Clp protease proteolytic subunit [Didierea
madagascariensis]
Length = 195
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDATWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|374249975|ref|YP_005089601.1| clpP gene product (chloroplast) [Silene latifolia]
gi|166235729|gb|ABY85636.1| ATP-dependent protease proteolytic subunit [Silene latifolia]
gi|329755546|gb|AEC04109.1| clp protease proteolytic subunit (chloroplast) [Silene latifolia]
Length = 196
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPVSSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|428697712|ref|YP_007026163.1| clp protease proteolytic subunit (chloroplast) [Pellia
endiviifolia]
gi|408773126|gb|AFU88873.1| clp protease proteolytic subunit (chloroplast) [Pellia
endiviifolia]
Length = 203
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 161
>gi|183217765|ref|YP_001837385.1| ATP-dependent Clp protease proteolytic subunit [Guizotia
abyssinica]
gi|334701827|ref|YP_004564397.1| clp protease proteolytic subunit (chloroplast) [Ageratina
adenophora]
gi|179366280|gb|ACB86551.1| clp protease proteolytic subunit [Guizotia abyssinica]
gi|334089698|gb|AEG64581.1| clp protease proteolytic subunit (chloroplast) [Ageratina
adenophora]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKT 228
+R+ + PAG+ A + E ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRT 162
>gi|94502515|ref|YP_588142.1| ATP-dependent Clp protease proteolytic subunit [Helianthus annuus]
gi|122179559|sp|Q1KXT4.1|CLPP_HELAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88656919|gb|ABD47170.1| clp protease proteolytic subunit [Helianthus annuus]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKT 228
+R+ + PAG+ A + E ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRT 162
>gi|32401338|gb|AAP80841.1| ATP-dependent Clp protease proteolytic subunit [Griffithsia
japonica]
Length = 114
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 85/113 (75%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL+R PG WVD++N LYRER+IF+GQ ID+E +NQI+A MLYL+S D+S
Sbjct: 1 MPIGVPKVLFRVPGAPQADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLESEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
K +Y+YIN PGG V +AIYDTM+ +KS V T VG A +A FLL GGEKG
Sbjct: 61 KPIYLYINSPGGSVIAGMAIYDTMKHIKSEVVTINVGLAASMASFLLGGGEKG 113
>gi|156597979|gb|ABU85256.1| clp protease proteolytic subunit [Cycas micronesica]
Length = 202
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 61 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I ++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 162
>gi|32480867|ref|NP_862778.1| ATP-dependent Clp protease proteolytic subunit [Calycanthus
floridus var. glaucus]
gi|68052187|sp|Q7YJV2.1|CLPP_CALFG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|32399403|emb|CAD28745.1| ATP-dependent protease proteolytic subunit [Calycanthus floridus
var. glaucus]
Length = 202
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|342316314|ref|YP_004769836.1| clp protease proteolytic subunit (chloroplast) [Wolffiella
lingulata]
gi|341834179|gb|AEK94449.1| clp protease proteolytic subunit [Wolffiella lingulata]
Length = 202
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MFFGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 162
>gi|313199614|ref|YP_004021229.1| clp protease proteolytic subunit [Isoetes flaccida]
gi|291575343|gb|ADE18056.1| clp protease proteolytic subunit [Isoetes flaccida]
Length = 205
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV R GE W+D+ N LYRER++F+GQ+ID+E +NQ + ++YL+ D S
Sbjct: 1 MPIGVPKVSLRIFGEEDIVWIDVHNRLYRERLLFLGQHIDDEIANQTICILMYLNGEDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T CVG A + F+LAGGE R A+P
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDIMQYIIPNVNTICVGLAASMGSFILAGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P + GQA + EA+E+L++RD + K ++T
Sbjct: 121 ARVMIHQPGSSFYDGQAGECLVEAEEMLKLRDCVTKIYVQRT 162
>gi|7524625|ref|NP_042379.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
gi|1168979|sp|P41609.1|CLPP_PINTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1262619|dbj|BAA04336.1| ATP-dependent protease subunit [Pinus thunbergii]
gi|356997613|gb|AET45516.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
sylvestris]
gi|356999139|gb|AET47021.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
nigra]
gi|357001401|gb|AET49252.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
densiflora]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+RI + PA + G A D NE+ + +RDYI + +TD G
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPG 166
>gi|330850654|ref|YP_004376535.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
gi|302024783|gb|ADK89629.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
Length = 212
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 109/170 (64%), Gaps = 9/170 (5%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 187 -------LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
++R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 AFRILLFVNRVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 170
>gi|290489444|gb|ADD31106.1| clp protease proteolytic subunit protein [Meliosma aff. cuneifolia
Moore 333]
Length = 202
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQGVESEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|50346808|ref|YP_053179.1| ATP-dependent Clp protease proteolytic subunit [Nymphaea alba]
gi|121720638|ref|YP_001001559.1| clp protease proteolytic subunit [Nuphar advena]
gi|68052136|sp|Q6EW27.1|CLPP_NYMAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380559|sp|A1XFY0.1|CLPP_NUPAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50250353|emb|CAF28619.1| ATP-dependent protease proteolytic subunit [Nymphaea alba]
gi|84682229|gb|ABC60483.1| clp protease proteolytic subunit [Nuphar advena]
Length = 202
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRT 162
>gi|372485872|gb|AEX96572.1| clp protease proteolytic subunit (chloroplast) [Calibanus hookerii]
Length = 210
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 107/168 (63%), Gaps = 7/168 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 S------RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 AMLYQYIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 168
>gi|122202884|sp|Q2QD64.1|CLPP_CUCSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74027125|gb|AAZ94675.1| ATP-dependent protease [Cucumis sativus]
gi|115432828|gb|ABI97441.1| clp protease proteolytic subunit [Cucumis sativus]
gi|115498328|gb|ABI98770.1| clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WVDL+N LYR+R++F+GQ+++ E SNQI+ M+YL D +
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y++IN PGG V P + ++DTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + ++G+ + E+ ELL +R+ I K ++T
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRT 162
>gi|91209012|ref|YP_538874.1| ATP-dependent Clp protease proteolytic subunit [Solanum
bulbocastanum]
gi|108773154|ref|YP_635664.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
gi|122196329|sp|Q27S24.1|CLPP_SOLTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122201813|sp|Q2MIG3.1|CLPP_SOLBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84371919|gb|ABC56237.1| clp protease proteolytic subunit [Solanum bulbocastanum]
gi|88656828|gb|ABD47081.1| clp protease proteolytic subunit [Solanum tuberosum]
gi|329124607|gb|AEB72164.1| clp protease proteolytic subunit (chloroplast) [Solanum tuberosum]
gi|329124694|gb|AEB72250.1| clp protease proteolytic subunit (chloroplast) [Solanum tuberosum]
Length = 198
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL+R PG+ WVD++N LYRER++F+GQ I + SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P
Sbjct: 61 KELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P A Q + EA EL+++R+ + + + +T
Sbjct: 121 ARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTRVYAERT 162
>gi|356998847|gb|AET46733.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
patula]
Length = 196
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
SR+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 SRVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|334702349|ref|YP_004465212.1| clp protease proteolytic subunit [Jacobaea vulgaris]
gi|308156107|gb|ADO15435.1| clp protease proteolytic subunit [Jacobaea vulgaris]
Length = 196
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDIHTICMGAAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKT 228
+R+ + PAG+ A + E ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRT 162
>gi|356998122|gb|AET46018.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
radiata]
Length = 196
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|374411880|gb|AEZ48924.1| clp protease proteolytic subunit, partial [Iris virginica]
Length = 196
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLFLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRT 161
>gi|309322471|ref|YP_003933985.1| clp protease proteolytic subunit [Eucalyptus grandis]
gi|308223305|gb|ADO23613.1| clp protease proteolytic subunit [Eucalyptus grandis]
Length = 195
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ I + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRT 161
>gi|372000221|gb|AEX65187.1| ATP-dependent Clp protease proteolytic subunit [Portulaca oleracea]
Length = 195
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIGNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|228016377|gb|ACP51210.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
gi|356997108|gb|AET45018.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
yunnanensis]
gi|356997540|gb|AET45444.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
taiwanensis]
gi|356999575|gb|AET47451.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
massoniana]
gi|357000013|gb|AET47883.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
kesiya]
gi|357000232|gb|AET48099.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hwangshanensis]
gi|357000668|gb|AET48529.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
fragilissima]
Length = 196
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI + +TD G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPG 166
>gi|428165659|gb|EKX34649.1| hypothetical protein GUITHDRAFT_155685 [Guillardia theta CCMP2712]
Length = 271
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 7/164 (4%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P+V Y+ PG+ +Q++D+WN +YRER+++IGQ++D+EF+NQ++A +L+L++ D ++ V
Sbjct: 52 VPRVPYKAPGDQVYQFMDIWNRMYRERILYIGQDLDDEFANQMIAVLLWLNNEDATQGVQ 111
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MY N PGG+V LA+YDTM ++ V T +G A ++ FL G+KG R A+P +R
Sbjct: 112 MYFNCPGGEVRAGLAVYDTMNNMDFDVTTLNLGIAASISAFLCGAGKKGQRMALPNARFL 171
Query: 192 LDSP-------AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L +P + GQA D+ EA E+LR+R+ +FK LSR T
Sbjct: 172 LQNPKLEDMGLSQVLYGQASDVSIEATEILRMREKVFKGLSRFT 215
>gi|374411864|gb|AEZ48917.1| clp protease proteolytic subunit [Molineria capitulata]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQAVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|78779134|ref|YP_397246.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|115311341|sp|Q31BD5.1|CLPP1_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78712633|gb|ABB49810.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 195
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
A DIR +ADE+L +++ + ELS +T DYE K
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYETIK 164
>gi|374411892|gb|AEZ48930.1| clp protease proteolytic subunit, partial [Neoastelia spectabilis]
Length = 201
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|169142814|ref|YP_001687238.1| ATP-dependent Clp protease proteolytic subunit [Aneura mirabilis]
gi|153973840|gb|ABS54500.1| clp protease proteolytic subunit [Aneura mirabilis]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 161
>gi|372000213|gb|AEX65183.1| ATP-dependent Clp protease proteolytic subunit [Anredera
baselloides]
Length = 195
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI+DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIFDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|374411866|gb|AEZ48918.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
Length = 203
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|356997467|gb|AET45372.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
tropicalis]
Length = 196
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDIMQAIVPDVHTICMGVAASMGSFILIGGEIPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI + +TD G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTVLRDYITRCYMERTDQPG 166
>gi|404474437|ref|YP_006665805.1| clp protease proteolytic subunit (chloroplast) [Elodea canadensis]
gi|374094622|gb|AEY84678.1| clp protease proteolytic subunit (chloroplast) [Elodea canadensis]
Length = 206
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELLR+R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYETQTGEFILEAEELLRLRETLTKVYVQRT 161
>gi|374411850|gb|AEZ48910.1| clp protease proteolytic subunit [Albuca kirkii]
Length = 203
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPVGVPKVPFRSPGEEDAIWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINTPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|115604958|ref|YP_784411.1| clp protease proteolytic subunit [Drimys granadensis]
gi|122164416|sp|Q06GX2.1|CLPP_DRIGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112032686|gb|ABH88321.1| clp protease proteolytic subunit [Drimys granadensis]
Length = 202
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|68164829|ref|YP_247625.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
gi|67511424|emb|CAJ00784.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WVDL+N LYR+R++F+GQ+++ E SNQI+ M+YL D +
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y++IN PGG V P + ++DTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + ++G+ + E+ ELL +R+ I K ++T
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRT 162
>gi|114107071|ref|YP_740227.1| clp protease proteolytic subunit [Liriodendron tulipifera]
gi|122227470|sp|Q0G9J4.1|CLPP_LIRTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113201019|gb|ABI32534.1| clp protease proteolytic subunit [Liriodendron tulipifera]
Length = 202
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|356999212|gb|AET47093.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
muricata]
Length = 203
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|228015924|gb|ACP50764.1| ATP-dependent Clp protease proteolytic subunit [Pinus taeda]
gi|228016306|gb|ACP51140.1| ATP-dependent Clp protease proteolytic subunit [Pinus ponderosa]
gi|228016819|gb|ACP51645.1| ATP-dependent Clp protease proteolytic subunit [Pinus attenuata]
gi|228017185|gb|ACP52005.1| ATP-dependent Clp protease proteolytic subunit [Pinus leiophylla
var. chihuahuana]
gi|356996528|gb|AET44446.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
leiophylla var. chihuahuana]
gi|356996746|gb|AET44661.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
caribaea]
gi|356996963|gb|AET44875.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
arizonica]
gi|356997178|gb|AET45087.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
yecorensis]
gi|356997758|gb|AET45659.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
serotina]
gi|356997831|gb|AET45731.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
sabiniana]
gi|356997976|gb|AET45874.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
rigida]
gi|356998268|gb|AET46162.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pungens]
gi|356998555|gb|AET46445.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
ponderosa var. scopulorum]
gi|356998628|gb|AET46517.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
ponderosa var. benthamiana]
gi|356998920|gb|AET46805.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
palustris]
gi|356998993|gb|AET46877.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
occidentalis]
gi|356999648|gb|AET47523.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
lumholtzii]
gi|356999721|gb|AET47595.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
leiophylla]
gi|356999794|gb|AET47667.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
lawsonii]
gi|356999867|gb|AET47739.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pringlei]
gi|357000159|gb|AET48027.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
jeffreyi]
gi|357000522|gb|AET48385.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
greggii]
gi|357000741|gb|AET48601.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
engelmannii]
gi|357000814|gb|AET48673.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
elliottii]
gi|357000960|gb|AET48817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
echinata]
gi|357001034|gb|AET48890.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
douglasiana]
gi|357001688|gb|AET49535.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
cubensis]
gi|357001834|gb|AET49679.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
arizonica var. cooperi]
Length = 196
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|317134129|ref|YP_004123449.1| ClpP [Rhizanthella gardneri]
gi|255985060|gb|ACU46607.1| ClpP [Rhizanthella gardneri]
Length = 195
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGLPKVPFRIPGEEDAIWIDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P ++IYDTMQ + V T C+G A + +L GGE R A P
Sbjct: 61 RDLHLFINSPGGWVIPGISIYDTMQFVPPTVHTVCIGLAASIGSLILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+E L++R+ I K ++T
Sbjct: 121 ARVMIHQPASSFYESQVGEFILEAEEFLKLRETILKVYVQRT 162
>gi|228016444|gb|ACP51276.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. insularis]
gi|228016508|gb|ACP51339.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. torreyana]
gi|356999066|gb|AET46949.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pseudostrobus var. apulcensis]
gi|356999429|gb|AET47307.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
montezumae]
gi|357000377|gb|AET48242.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hartwegii]
gi|357001109|gb|AET48964.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hartwegii]
gi|357001255|gb|AET49108.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
devoniana]
gi|357001761|gb|AET49607.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
coulteri]
Length = 196
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLIGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|356999284|gb|AET47164.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
mugo]
Length = 196
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+RI + PA + G A D NE+ + +RDYI + +T+ G
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTEQPG 166
>gi|374411916|gb|AEZ48942.1| clp protease proteolytic subunit [Syngonanthus chrysanthus]
Length = 199
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+ GE W+DL N LYR+R++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSSGEEDAVWIDL-NRLYRQRLLFLGQEVDNEISNQIVGLMVYLSLEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICIGLAASMGSFVLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLREILTKVYVQRT 161
>gi|350529149|dbj|BAL03693.1| ATP-dependent Clp protease proteolytic subunit [Bowenia serrulata]
Length = 202
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 61 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R + PA + GQA + EA+E+L++RD I ++T
Sbjct: 121 ARAMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 162
>gi|374411860|gb|AEZ48915.1| clp protease proteolytic subunit, partial [Chamaedorea seifrizii]
Length = 195
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|124302931|ref|YP_001023726.1| ATP-dependent Clp protease proteolytic subunit [Angiopteris evecta]
gi|160380542|sp|A2T358.1|CLPP_ANGEV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110628329|gb|ABG79625.1| clp protease proteolytic subunit [Angiopteris evecta]
Length = 197
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + +L GGE R A+P
Sbjct: 60 QDMYLYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSSILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRT 161
>gi|313183847|ref|YP_004021690.1| clp protease proteolytic subunit [Prunus persica]
gi|309321459|gb|ADO65000.1| clp protease proteolytic subunit [Prunus persica]
Length = 195
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++ LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDVYR-LYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPAASFYEAQTGEFILEAEELLKLRETLTRVYAQRT 161
>gi|349589908|gb|AEP94879.1| clp protease proteolytic subunit [Vigna unguiculata]
Length = 197
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRTPGDKDASWVDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + ++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ I + ++T
Sbjct: 121 HARVMIHQPASSFYEAQAGEFVLEAEELLKMRETITRVYVQRT 163
>gi|157413171|ref|YP_001484037.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526501|ref|ZP_05138553.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|157387746|gb|ABV50451.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9215]
gi|221537925|gb|EEE40378.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 195
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
A DIR +ADE+L +++ + ELS +T D+E K
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDFETIK 164
>gi|364532639|ref|YP_004940609.1| clpP gene product [Neottia nidus-avis]
gi|339717083|gb|AEJ88710.1| ATP-dependent Clp protease proteolytic subunit [Neottia nidus-avis]
Length = 195
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD++N L+RER++F+GQ I+ E SNQ+ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGDEDASWVDIYNRLHRERLLFLGQEIESEISNQLAGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPTDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P+ + QA D EA+ELL +R+ + K ++T
Sbjct: 121 ARVMIHQPSSSFYDSQAGDFILEAEELLNLRETLTKVYVQRT 162
>gi|296399222|gb|ADH10397.1| clp protease proteolytic subunit [Selaginella moellendorffii]
Length = 206
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+ M+YL+ + S
Sbjct: 1 MPIGVPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG R A+P
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I +RKT
Sbjct: 121 ARVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKT 162
>gi|357000305|gb|AET48171.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
heldreichii]
gi|357000450|gb|AET48314.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
halepensis]
Length = 196
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGQPG 166
>gi|228015993|gb|ACP50832.1| ATP-dependent Clp protease proteolytic subunit [Pinus resinosa]
Length = 196
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI + +T+ G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTEQPG 166
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IFIGQ ID+ +N ++A +L+L+S D K VY+
Sbjct: 6 PYVIEQT-GRGERSY-DIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKDVYL 63
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ +K PV T C G A +A LLA GE+G R ++P SRI +
Sbjct: 64 YINSPGGVVTAGLAIYDTMQYIKCPVSTICTGQAASMAAVLLAAGERGKRISLPHSRIMI 123
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+LRV++ + LS T
Sbjct: 124 HQPLGGAQGQASDIEIQAREILRVKEILNSILSNHT 159
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IFIGQ ID+ SN ++A +L+L+S D K V++
Sbjct: 11 PYVIEQT-GRGERSY-DIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKDVFV 68
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ +K PV T CVG A +A LL+ GEKG R +P SRI +
Sbjct: 69 YINSPGGVVTAGLAIYDTMQYVKCPVSTICVGQAASMAAVLLSAGEKGKRICLPHSRIMI 128
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+LR+++ + LS T
Sbjct: 129 HQPLGGAQGQASDIEIQAKEILRMKEILNSILSNHT 164
>gi|114329680|ref|YP_740501.1| clp protease proteolytic subunit [Citrus sinensis]
gi|122166158|sp|Q09MF2.1|CLPP_CITSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113952646|gb|ABI49044.1| clp protease proteolytic subunit [Citrus sinensis]
Length = 196
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR+PG+ WVD++N LYRER++F+GQ ++ + SNQ++ M+YL +++
Sbjct: 1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLA G R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYI 220
+R+ + P GA G Q + + +ELLR+R+ +
Sbjct: 121 ARVMIHQPIGAFYGAQTGEFILDTEELLRLREIL 154
>gi|372450165|ref|YP_005090203.1| clpP gene product (chloroplast) [Ricinus communis]
gi|339516191|gb|AEJ82581.1| ATP-dependent Clp protease proteolytic subunit [Ricinus communis]
Length = 195
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A +A F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMASFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P AG Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPIAGFYEAQIGEFVLEAEELLKLREILTRIYAQRT 161
>gi|149390292|ref|YP_001294123.1| clp protease proteolytic subunit [Chloranthus spicatus]
gi|160380547|sp|A6MME7.1|CLPP_CHLSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146744212|gb|ABQ43284.1| clp protease proteolytic subunit [Chloranthus spicatus]
Length = 201
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P L IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 ARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRT 161
>gi|346683318|ref|YP_004842263.1| clp protease proteolytic subunit [Pyrus pyrifolia]
gi|345433585|dbj|BAK69407.1| clp protease proteolytic subunit [Pyrus pyrifolia]
Length = 195
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++ LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDIYR-LYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRT 161
>gi|290489450|gb|ADD31109.1| clp protease proteolytic subunit protein [Phoradendron serotinum]
Length = 196
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++
Sbjct: 1 MPIGVPRVPFRIPGEEYSTWVDIYNRLYRERLLFLGQGVDSEISNQLISLMVYLSIENET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y +IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG R A P
Sbjct: 61 KDFYFFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGSITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSYFEAQTVEFILEAEELLKLRETLTQVYVQRT 162
>gi|123968338|ref|YP_001009196.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|123198448|gb|ABM70089.1| Clp protease subunit [Prochlorococcus marinus str. AS9601]
Length = 195
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
A DIR +ADE+L +++ + ELS +T DY+ K
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYDTIK 164
>gi|290489460|gb|ADD31114.1| clp protease proteolytic subunit protein [Euonymus americanus]
Length = 197
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P++ +R PGE + WVD++N LYRER++F+GQ I+ +NQ++A +LYL D+
Sbjct: 1 MPIGVPRIPFRNPGENASSWVDIYNRLYRERLLFLGQIINTHLANQLIALILYLTMESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVRPDVQTICLGLAASMGSFILVGGKITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P A Q + EA+ELL++R+ I + ++T
Sbjct: 121 ARVMIHQPFSAFFMAQVGEFVLEAEELLKLRETITRVYVQRT 162
>gi|324986430|ref|YP_004276301.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|228016061|gb|ACP50899.1| ATP-dependent Clp protease proteolytic subunit [Pinus rzedowskii]
gi|323522525|gb|ADX94867.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|356996673|gb|AET44589.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
cembroides]
gi|356998049|gb|AET45946.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
remota]
gi|356998195|gb|AET46090.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
quadrifolia]
gi|356998774|gb|AET46661.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pinceana]
gi|356999502|gb|AET47379.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
maximartinezii]
gi|357000086|gb|AET47955.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
johannis]
gi|357000887|gb|AET48745.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
edulis]
gi|357001182|gb|AET49036.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
discolor]
gi|357001615|gb|AET49463.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
culminicola]
Length = 196
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++++IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFLFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + G A + NEA + +R+YI K +TD
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYVERTD 163
>gi|393396127|ref|YP_006460367.1| clp protease proteolytic subunit (chloroplast) [Vigna unguiculata]
gi|387598491|gb|AFJ91883.1| clp protease proteolytic subunit (chloroplast) [Vigna unguiculata]
Length = 196
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRTPGDKDASWVDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + ++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ I ++T
Sbjct: 121 HARVMIHQPASSFYEAQAGEFVLEAEELLKLRETITNVYVQRT 163
>gi|356998410|gb|AET46302.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pseudostrobus]
Length = 196
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ+ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLXGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|89280660|ref|YP_514877.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
gi|122201771|sp|Q2MI76.1|CLPP_SOLLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84372007|gb|ABC56324.1| clp protease proteolytic subunit [Solanum lycopersicum]
gi|89241696|emb|CAJ32419.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
Length = 206
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V++R PG+ WVD++N LYRER++F+GQ I E SNQ++ MLYL D++
Sbjct: 1 MPIGVPRVVFRNPGDPISSWVDIYNRLYRERLLFLGQGIGTELSNQLIGLMLYLSMEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P
Sbjct: 61 KDLYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICLGLAASMGSFILAGGQLTKRIAFPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P +G Q + EA E+ ++R+ + + + KT
Sbjct: 121 ARVMIHEPYSGFYMAQVGEFVLEAIEMAKLRETLTRVYAEKT 162
>gi|228017007|gb|ACP51830.1| ATP-dependent Clp protease proteolytic subunit [Pinus canariensis]
gi|228017448|gb|ACP52264.1| ATP-dependent Clp protease proteolytic subunit [Pinus merkusii]
gi|356997903|gb|AET45802.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
roxburghii]
gi|356999940|gb|AET47811.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
latteri]
Length = 196
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGQPG 166
>gi|298710838|emb|CBJ26347.1| ATP-dependent Clp protease, proteolytic subunit [Ectocarpus
siliculosus]
Length = 237
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 28 SPSVFGTG--KPNL----SAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPG 81
SPS F TG P L + GR ++ Y + K MMPIG PKV YR PG
Sbjct: 23 SPSAFMTGTMSPGLRTPGATSALGREART-YRRLSTAKSGAASTVMMPIGVPKVAYRVPG 81
Query: 82 EGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDV 141
+ WVD++N LYRER+IF+GQ ID+E +NQI+ +LYLDS D +K +Y+Y+N PGG V
Sbjct: 82 APTADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSV 141
Query: 142 TPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
LA++DTMQ ++S V T VG A +A F+LA G K
Sbjct: 142 IAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAK 179
>gi|115443583|ref|YP_778602.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
gi|122227446|sp|Q06J25.1|CLPP_BIGNA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110810228|gb|ABG91434.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
Length = 195
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL++ + + QWVD++ LY++R+IF+ Q +D++FSNQI++ +L+LDS
Sbjct: 1 MPIGIPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKE 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN GG V ++IYDTM + S + T C+G A ++ +LA G++ R +P
Sbjct: 61 ELIYFYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
SR+ L P GQA DI E++E+LR+R + K
Sbjct: 121 SRVLLHQPIMQVSGQASDILIESEEILRLRRILTK 155
>gi|374411852|gb|AEZ48911.1| clp protease proteolytic subunit, partial [Apostasia wallichii]
Length = 201
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ ++YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLLVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|34500938|ref|NP_904123.1| ATP-dependent Clp protease proteolytic subunit [Amborella
trichopoda]
gi|68052165|sp|Q70XY2.1|CLPP_AMBTC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481653|emb|CAD45131.1| ATP-dependent protease proteolytic subunit [Amborella trichopoda]
Length = 202
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQI+ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + A + EA ELL++R+ I ++T
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRT 162
>gi|217075244|gb|ACJ85982.1| unknown [Medicago truncatula]
gi|388496734|gb|AFK36433.1| unknown [Medicago truncatula]
Length = 195
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ P E WVDL+N L++ER++F+GQ ++ E SNQ++ M+YL S D +
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSSEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG+V +AI+D MQ +++ V T CVG A + LL GGE R A P
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQ + EA+ELL++R I +++T
Sbjct: 121 ARVMIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRT 162
>gi|126696140|ref|YP_001091026.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|126543183|gb|ABO17425.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9301]
Length = 195
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G +G RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTQGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
A DIR +ADE+L +++ + ELS +T DY+ K
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYDTIK 164
>gi|357001328|gb|AET49180.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
densata]
Length = 196
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI + +T G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTGQPG 166
>gi|156598137|gb|ABU85333.1| clp protease proteolytic subunit [Elaeis oleifera]
Length = 195
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RE ++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGIPKVPFRSPGEEDAIWVDV-NRLHREGLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|11497551|ref|NP_054959.1| ATP-dependent Clp protease proteolytic subunit [Spinacia oleracea]
gi|18203258|sp|Q9M3K5.1|CLPP_SPIOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7636132|emb|CAB88752.1| ATP-dependent protease proteolytic subunit [Spinacia oleracea]
Length = 196
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA 198
+R+ + PA +
Sbjct: 121 ARVMIHQPASS 131
>gi|326909417|ref|YP_004327687.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
gi|308523531|gb|ADO33581.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
Length = 195
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P AG Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPIAGFYEAQIGEFVLEAEELLKLREILTRIYAQRT 161
>gi|75755684|ref|YP_319788.1| ATP-dependent Clp protease proteolytic subunit [Acorus calamus]
gi|161622334|ref|YP_001586206.1| ATP-dependent Clp protease proteolytic subunit [Acorus americanus]
gi|122217404|sp|Q3V509.1|CLPP_ACOCL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74381734|emb|CAI53819.1| ATP-dependent protease proteolytic subunit [Acorus calamus]
gi|160369877|gb|ABX38768.1| clp protease proteolytic subunit [Acorus americanus]
Length = 202
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRT 162
>gi|228017699|gb|ACP52511.1| ATP-dependent Clp protease proteolytic subunit [Pinus pinaster]
Length = 202
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINGEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P +A++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVALFDMMQAIVPDVNTICMGVAASMGSFILIGGEMHQRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYI 220
+RI + PA + G A D NE+ + +R+YI
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTLLREYI 154
>gi|255961322|ref|YP_003097504.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
gi|254941494|gb|ACT89009.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
Length = 206
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Query: 69 PIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSK 128
PIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+ M+YL+ + SK
Sbjct: 2 PIGVPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRSK 61
Query: 129 RVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS 188
+Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG R A+P +
Sbjct: 62 DIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPHA 121
Query: 189 RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
R+ + PA + GQA + EA+E+L++RD I +RKT
Sbjct: 122 RVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKT 162
>gi|68052061|sp|Q5QA83.1|CLPP_ACOGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56122453|gb|AAV74350.1| ClpP [Acorus gramineus]
Length = 202
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL+ +PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRT 162
>gi|225544148|ref|YP_002720137.1| clpP [Jatropha curcas]
gi|224979589|gb|ACN72716.1| clpP [Jatropha curcas]
Length = 195
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P AG Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPIAGFYEAQIVEFVLEAEELLKLREILTRIYAQRT 161
>gi|157325555|ref|YP_001468333.1| ATP-dependent Clp protease proteolytic subunit [Ipomoea purpurea]
gi|157056783|gb|ABV02373.1| clp protease proteolytic subunit [Ipomoea purpurea]
Length = 204
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ W+D++N LYRER +F+ Q ID E +NQI+ ++YL+ DD+
Sbjct: 1 MPIGVPKVPFRNPGDEDASWIDIYNRLYRERFLFLVQEIDSEIANQIVGLLVYLNIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGGDV +AIYD MQ+++ V T C+G A + F+LAGG R+A P
Sbjct: 61 KDIFLYINSPGGDVISGVAIYDMMQTVRPGVSTICIGLAASMGSFILAGGAITRRAAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P + A ++ E E L++R+ I + +++T
Sbjct: 121 ARVMIHQPRTSFFESHAGELLLEMKEALKLRERIAEIYAQRT 162
>gi|29565593|ref|NP_817171.1| ATP-dependent Clp protease proteolytic subunit [Pinus koraiensis]
gi|237688459|ref|YP_002905078.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|237688591|ref|YP_002905208.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|237688659|ref|YP_002905275.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|324986358|ref|YP_004276230.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|68052195|sp|Q85X43.1|CLPP_PINKO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29469692|gb|AAO74020.1| ATP-dependent protease subunit [Pinus koraiensis]
gi|226875288|gb|ACO89027.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|226876052|gb|ACO89308.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|226951117|gb|ACO94180.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|228016125|gb|ACP50962.1| ATP-dependent Clp protease proteolytic subunit [Pinus sibirica]
gi|228016182|gb|ACP51018.1| ATP-dependent Clp protease proteolytic subunit [Pinus squamata]
gi|228016247|gb|ACP51082.1| ATP-dependent Clp protease proteolytic subunit [Pinus strobus]
gi|228016623|gb|ACP51452.1| ATP-dependent Clp protease proteolytic subunit [Pinus albicaulis]
gi|228016756|gb|ACP51583.1| ATP-dependent Clp protease proteolytic subunit [Pinus armandii]
gi|228016879|gb|ACP51704.1| ATP-dependent Clp protease proteolytic subunit [Pinus ayacahuite]
gi|228017126|gb|ACP51947.1| ATP-dependent Clp protease proteolytic subunit [Pinus cembra]
gi|228017247|gb|ACP52066.1| ATP-dependent Clp protease proteolytic subunit [Pinus flexilis]
gi|228017313|gb|ACP52131.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|228017506|gb|ACP52321.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|228017569|gb|ACP52383.1| ATP-dependent Clp protease proteolytic subunit [Pinus parviflora
var. pentaphylla]
gi|228017633|gb|ACP52446.1| ATP-dependent Clp protease proteolytic subunit [Pinus peuce]
gi|257042530|gb|ACV32804.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042558|gb|ACV32831.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042587|gb|ACV32859.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042617|gb|ACV32888.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042645|gb|ACV32915.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042673|gb|ACV32942.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042702|gb|ACV32970.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042730|gb|ACV32997.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042757|gb|ACV33023.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042785|gb|ACV33050.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|323514207|gb|ADX89754.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|356996600|gb|AET44517.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
chiapensis]
gi|356996819|gb|AET44733.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
bungeana]
gi|356997036|gb|AET44947.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
amamiana]
gi|356997251|gb|AET45159.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
kwangtungensis]
gi|356997323|gb|AET45230.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
wallichiana]
gi|356997686|gb|AET45588.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
strobiformis]
gi|356998341|gb|AET46234.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pumila]
gi|356999357|gb|AET47236.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
morrisonicola]
gi|357001474|gb|AET49324.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
dalatensis]
gi|357001546|gb|AET49395.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
fenzeliana var. dabeshanensis]
Length = 196
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + G A + NEA + +R+YI K +TD
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYIERTD 163
>gi|364284009|ref|YP_004940534.1| clpP gene product (chloroplast) [Boea hygrometrica]
gi|340549432|gb|AEK53254.1| clp protease proteolytic subunit (chloroplast) [Boea hygrometrica]
Length = 196
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ+++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRIPGEEDASWVDV-NRLYRERLLFLGQDVNSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V LAIYDTMQ ++ V T C+G A + FLLA GE R A P
Sbjct: 60 KDLYFFINSPGGWVIAGLAIYDTMQFVRPEVHTVCMGLAASMGSFLLAAGELTKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA+ELL++R+ I + +++T
Sbjct: 120 AWRVMIHQPAASFYEAQTGEFILEAEELLKIRETITRVYAQRT 162
>gi|33861299|ref|NP_892860.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460516|sp|Q7V1W0.1|CLPP1_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33633876|emb|CAE19201.1| Clp protease subunit [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 196
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 100/149 (67%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTDYE 231
A DIR +ADE+L +++ + ELS +T E
Sbjct: 131 ASDIRIQADEILYLKERLNTELSERTGKE 159
>gi|325210985|ref|YP_004286029.1| clp protease proteolytic subunit [Gossypium thurberi]
gi|290775847|gb|ADD62343.1| clp protease proteolytic subunit [Gossypium thurberi]
gi|326457064|gb|ADZ74328.1| clp protease proteolytic subunit [Gossypium anomalum]
gi|326457152|gb|ADZ74415.1| clp protease proteolytic subunit [Gossypium bickii]
gi|326457240|gb|ADZ74502.1| clp protease proteolytic subunit [Gossypium herbaceum]
gi|326457361|gb|ADZ74622.1| clp protease proteolytic subunit [Gossypium longicalyx]
gi|326457413|gb|ADZ74673.1| clp protease proteolytic subunit [Gossypium stocksii]
gi|326457501|gb|ADZ74760.1| clp protease proteolytic subunit [Gossypium sturtianum]
Length = 196
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRT 162
>gi|290489452|gb|ADD31110.1| clp protease proteolytic subunit protein [Ximenia americana]
Length = 198
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV R PGE WVD++N LYRER +F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPSRIPGEEYATWVDIYNQLYRERFLFLGQAVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDT+Q ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTIQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRI--ALDSPAGA-ARGQADDIRNEADELLRVRD 218
+RI + PA + Q + EA+ELL++R+
Sbjct: 121 ARIRVMIHQPASSYFEAQTGEFILEAEELLKLRE 154
>gi|400256612|ref|YP_006576139.1| ClpP (chloroplast) [Magnolia denudata]
gi|343887563|gb|AEM65242.1| ClpP [Magnolia denudata]
gi|372862276|gb|AEX98359.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia denudata]
Length = 201
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLREILTRVYVQRT 161
>gi|356996891|gb|AET44804.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
brutia]
Length = 196
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIGNQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI + +T G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTVLRDYITQCYIERTGQPG 166
>gi|374411886|gb|AEZ48927.1| clp protease proteolytic subunit, partial [Lilium superbum]
Length = 198
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+G PKV +R PGE WVD L N L+RER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPVGVPKVPFRNPGEEDAVWVDVLINRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
++ Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 TRDFYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 HARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRT 163
>gi|149390378|ref|YP_001294377.1| ATP-dependent Clp protease proteolytic subunit [Dioscorea
elephantipes]
gi|160380552|sp|A6MMN2.1|CLPP_DIOEL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148668070|gb|ABR01454.1| clp protease proteolytic subunit [Dioscorea elephantipes]
Length = 203
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDNEVSNQLVGLMVYLSIEDAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + +L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGMAIYDTMQFVSPDVHTICMGLAASMGSLILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|123966075|ref|YP_001011156.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200441|gb|ABM72049.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9515]
Length = 196
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 99/146 (67%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT 228
A DIR +ADE+L +++ + ELS +T
Sbjct: 131 ASDIRIQADEILYLKERLNSELSERT 156
>gi|395001697|ref|YP_006503714.1| clp protease proteolytic subunit (chloroplast) [Erycina pusilla]
gi|339431326|gb|AEJ72520.1| clp protease proteolytic subunit (chloroplast) [Erycina pusilla]
Length = 202
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDV--RLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDNT 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 59 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 118
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 119 ARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRT 160
>gi|290489464|gb|ADD31116.1| clp protease proteolytic subunit protein [Gunnera manicata]
Length = 198
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYR R++F+GQ + E SNQ+++ ++YL +D
Sbjct: 1 MPIGVPRVPHRIPGEEDAYWVDIYNRLYRNRIMFLGQEVSSEISNQLISLLVYLTIEEDR 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K V+++IN PGG V P +A+YDTM+ ++ + T C+G A + FLLAGGE R A P
Sbjct: 61 KDVFLFINSPGGWVVPGVALYDTMRFVQPEIHTICMGMAASMGSFLLAGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + + E++ELL++R+ I K ++T
Sbjct: 121 ARVMIHQPASSFYETRTGEFILESEELLKLREIITKVYVQRT 162
>gi|374411918|gb|AEZ48943.1| clp protease proteolytic subunit, partial [Tradescantia ohiensis]
Length = 201
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 106/168 (63%), Gaps = 8/168 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGMAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 187 -----LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 AMVFYIIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRIYVQRT 167
>gi|324986501|ref|YP_004276371.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
gi|323522689|gb|ADX94937.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
Length = 196
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + G A + NEA + +R YI K +TD
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRTYITKCYIERTD 163
>gi|372485821|gb|AEX96547.1| clp protease proteolytic subunit (chloroplast) [Polianthes sp.
Pires 2011-05]
Length = 204
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 89/131 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA 198
+R+ + PA +
Sbjct: 121 ARVMIHQPASS 131
>gi|374411908|gb|AEZ48938.1| clp protease proteolytic subunit, partial [Ravenea hildebrandtii]
Length = 211
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 15/176 (8%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLW--------------NALYRERVIFIGQNIDEEFSNQ 113
MPIG PKV +R+PGE WVD++ N L+RER++F+GQ +D E SNQ
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVFFEPYAPKGTYFVLINRLHRERLLFLGQEVDSEISNQ 60
Query: 114 ILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 173
++ M+YL DD++ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+
Sbjct: 61 LVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFI 120
Query: 174 LAGGEKGNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
L GGE R A P +R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 LVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 176
>gi|352950957|ref|YP_004891261.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Larix
decidua]
gi|347977612|dbj|BAK86568.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Larix
decidua]
Length = 190
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPG 166
>gi|237688522|ref|YP_002905140.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
gi|226875351|gb|ACO89089.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
Length = 205
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D NE+ + +R+YI + +T
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIERT 162
>gi|228016943|gb|ACP51767.1| ATP-dependent Clp protease proteolytic subunit [Pinus banksiana]
Length = 204
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R +P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIVLPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D NE+ + +R+YI K +T
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITKCYIERT 162
>gi|228017379|gb|ACP52196.1| ATP-dependent Clp protease proteolytic subunit [Larix occidentalis]
Length = 196
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPG 166
>gi|227452690|gb|ACP34131.1| ATP-dependent protease subunit [Larix gmelinii]
Length = 196
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPG 166
>gi|356997395|gb|AET45301.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
virginiana]
gi|357001907|gb|AET49751.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
clausa]
Length = 215
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D NE+ + +R+YI + +T
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIERT 162
>gi|115605046|ref|YP_784498.1| clp protease proteolytic subunit [Piper cenocladum]
gi|122164337|sp|Q06GN5.1|CLPP_PIPCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112253775|gb|ABI14496.1| clp protease proteolytic subunit [Piper cenocladum]
Length = 202
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + + PA + + EA+ELL++R+ + + ++T
Sbjct: 121 AWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|334361975|ref|YP_004563892.1| clp protease proteolytic subunit [Nelumbo lutea]
gi|224474160|gb|ACN49349.1| clp protease proteolytic subunit [Nelumbo lutea]
gi|383286916|gb|AFH01565.1| clp protease proteolytic subunit (chloroplast) [Nelumbo lutea]
Length = 202
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 AWRVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRT 162
>gi|69214839|gb|AAZ03802.1| ATP-depedent Clp protease proteolytic subunit [Ranunculus
macranthus]
Length = 195
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P +AIYDTMQ + V T C+G A + FLL GGE R A P
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRT 161
>gi|325126890|ref|YP_004286127.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
gi|408830270|ref|YP_006883288.1| clp protease proteolytic subunit (chloroplast) [Fragaria vesca
subsp. bracteata]
gi|428697225|ref|YP_007025408.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
gi|428697311|ref|YP_007025493.1| clp protease proteolytic subunit (chloroplast) [Fragaria
virginiana]
gi|324022802|gb|ADY15376.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
gi|357198764|gb|AET62680.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
gi|357198850|gb|AET62765.1| clp protease proteolytic subunit (chloroplast) [Fragaria
virginiana]
gi|378554732|gb|AFC17667.1| clp protease proteolytic subunit (chloroplast) [Fragaria vesca
subsp. bracteata]
gi|407080506|gb|AFS89576.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
Length = 196
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPRVPFRSPGEEDAVWIDV-NRLYRERLLFLGQGVDNEISNQLIGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTVCMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA+ELL++R+ I + +++T
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYAQRT 162
>gi|544043|sp|P36387.1|CLPP_PINCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|457148|gb|AAA68094.1| ATP-dependent protease proteolytic subunit (chloroplast) [Pinus
contorta]
Length = 205
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + +Y MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D NE+ + VR+YI + +T
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERT 162
>gi|356998701|gb|AET46589.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pinea]
Length = 196
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D NE+ + +R+YI + +T
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLREYITECYIERT 162
>gi|342316230|ref|YP_004769739.1| ClpP [Magnolia kwangsiensis]
gi|452848713|ref|YP_007474395.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis]
gi|452848796|ref|YP_007474477.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|452848881|ref|YP_007474561.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
gi|302424205|gb|ADL39081.1| ClpP [Magnolia kwangsiensis]
gi|372862446|gb|AEX98527.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis]
gi|372862529|gb|AEX98609.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862614|gb|AEX98693.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862699|gb|AEX98777.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862868|gb|AEX98944.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
gi|372863038|gb|AEX99112.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
Length = 201
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRT 161
>gi|374411898|gb|AEZ48933.1| clp protease proteolytic subunit, partial [Pandanus utilis]
Length = 201
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD+ N L+RER++F+GQ +D E SN ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEGDAVWVDV-NRLHRERLLFLGQEVDNEVSNHLVGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGEWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEMTKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + +A + EA+ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYEAKAGEFILEAEELLKLRETLTKVYVQRT 161
>gi|372485815|gb|AEX96544.1| clp protease proteolytic subunit (chloroplast) [Echeandia sp.
Steele 1101]
Length = 195
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M++L DD+
Sbjct: 1 MPIGVPKVPFRIPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVFLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQLVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 120
Query: 188 SRIALDSPAGA 198
+R+ + PA +
Sbjct: 121 ARVMIHQPASS 131
>gi|372862192|gb|AEX98276.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia liliiflora]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWIDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLREILTRVYVQRT 161
>gi|169794098|ref|YP_001718462.1| ATP-dependent Clp protease proteolytic subunit [Manihot esculenta]
gi|157695910|gb|ABV66179.1| clp protease proteolytic subunit [Manihot esculenta]
Length = 195
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E +NQ++ M+YL + +
Sbjct: 1 MPIGVPKVPFRNPGEDDSTWIDI-NRLYRERLLFLGQDVDSEIANQLIGLMVYLSIENAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P +G Q + EA+ELL++R+ + + +++T
Sbjct: 120 ARVMIHQPISGYYEAQIVEFVLEAEELLKLREILTRIYAQRT 161
>gi|443267332|ref|YP_007375068.1| clp protease proteolytic subunit [Quercus rubra]
gi|441421947|gb|AGC31271.1| clp protease proteolytic subunit [Quercus rubra]
Length = 196
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + A + EA+E++++R+ I + ++T
Sbjct: 120 ARRVMIHQPASSFYEAPAGEFILEAEEMMKLRETITRVYVQRT 162
>gi|383788383|ref|YP_005472952.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
gi|381364020|dbj|BAL80849.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
Length = 195
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 108/161 (67%), Gaps = 3/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPI P V+ T G G + D+++ L ++R+IF+ I+ ++ I+A +LYL+S+D +
Sbjct: 1 MPI-IPSVV-ETTGRGEVSF-DIYSRLLKDRIIFLTGEIETVHADLIVAELLYLESLDST 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG+V P +AIYDTMQ +K+PV T C+G A LA +LA G KG R A+P
Sbjct: 58 QDIYLYINSPGGEVIPGMAIYDTMQYIKAPVATICLGQAASLAAVILAAGRKGKRYALPH 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI +A EL+R++ I + LS+ T
Sbjct: 118 SRILIHQPWGGAQGQATDIEIQAKELIRIKRMINEILSKHT 158
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R++F+G+ I+E +N ++A +L+L+S D K VY
Sbjct: 12 VPYVVEQT-GRGERTY-DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVY 69
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K PV T C G A +A LLAGG KG R A+P +RI
Sbjct: 70 LYINSPGGVVTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIALPHARIM 129
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI +A E+LR+R+ + + L T
Sbjct: 130 IHQPLGGAQGQATDIEIQAKEILRLREVLNQILVDHT 166
>gi|351653785|ref|YP_004891401.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pseudotsuga sinensis var. wilsoniana]
gi|347977619|dbj|BAK86574.1| ATP-dependent Clp protease proteolytic subunit [Pseudotsuga
sinensis var. wilsoniana]
gi|356998483|gb|AET46374.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pseudotsuga menziesii var. menziesii]
Length = 196
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTVCMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASSYYDGPAADFHNESKHVTMLRDYITKCYIERTGNPG 166
>gi|242910145|ref|YP_002970669.1| Clp protease proteolytic subunit [Alsophila spinulosa]
gi|218454814|gb|ACK77151.1| Clp protease proteolytic subunit [Alsophila spinulosa]
Length = 200
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER+ +GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLPLLGQQVDDEIANQLIGIMMYLNGEDEA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y+Y+N PGG V +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 61 KDTYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSISTGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I + +++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITRVYAQRT 162
>gi|346578216|ref|YP_004841808.1| clp protease proteolytic subunit [Cucumis melo subsp. melo]
gi|344030516|gb|AEM76917.1| clp protease proteolytic subunit [Cucumis melo subsp. melo]
Length = 196
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSMENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGGVISGLGIYDTMQFVQPHVQTVCMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + Q + EA ELLR+R+ + + ++T
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFILEAKELLRLREILTRVYVQRT 162
>gi|374411856|gb|AEZ48913.1| clp protease proteolytic subunit, partial [Belosynapsis ciliata]
Length = 195
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T CVG A + +L GG R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTVCVGMAASMGSIILVGGAITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRD 218
+R+ + PA + QA + EA+ELL++R+
Sbjct: 120 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRE 151
>gi|308745997|ref|YP_003934583.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
gi|302375430|gb|ADL29804.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
Length = 200
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE VD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V +++YD MQ + V T C+G A + +LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E ++RD I + +++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCITRVYAQRT 162
>gi|228016690|gb|ACP51518.1| ATP-dependent Clp protease proteolytic subunit [Pinus aristata]
Length = 196
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFLNCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+R+ + PA + G A + NE + +R+YI K +TD
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEVKHITMLRNYITKCYIERTD 163
>gi|372485813|gb|AEX96543.1| clp protease proteolytic subunit (chloroplast) [Camassia
scilloides]
Length = 204
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA 198
+R+ + PA +
Sbjct: 121 ARVMIHQPASS 131
>gi|122894015|ref|YP_001004211.1| clp protease proteolytic subunit [Ranunculus macranthus]
gi|160380563|sp|A1XGR3.1|CLPP_RANMC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85540829|gb|ABC70781.1| clp protease proteolytic subunit [Ranunculus macranthus]
Length = 201
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYR-LHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P +AIYDTMQ + V T C+G A + FLL GGE R A P
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRT 161
>gi|357470615|ref|XP_003605592.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355506647|gb|AES87789.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 195
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ P E WVDL+N L++ER++F+GQ ++ E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSLEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG+V +AI+D MQ +++ V T CVG A + LL GGE R A P
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
R+ + PA + GQ + EA+ELL++R I +++T
Sbjct: 121 LRVMIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRT 162
>gi|99024182|dbj|BAE94553.1| ATP-dependent protease proteolytic subunit ClpP [Takakia
lepidozioides]
Length = 176
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE +D++N L+RER++F GQ++D+E +NQ + M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRIDVYNRLHRERLLFPGQHVDDEIANQPIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVAPDVHTICMGLAASMGSFTSTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I K ++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECITEAEEVLKLRDCITKVYVQRT 162
>gi|449326816|gb|AGE93394.1| clp protease proteolytic subunit [Alpinia zerumbet]
Length = 205
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WV+L+N LYRER++F+GQ + EE SN I+ M+YL D +
Sbjct: 1 MPVGVPKVPFRNPGEEDATWVELYNRLYRERLLFLGQEVKEEISNTIVGLMVYLSIEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V +AI+DTMQ + V T C+G A +A F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVISGIAIFDTMQFVTPNVHTICMGIAASMASFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + G++ D E +++++R+ + K ++T
Sbjct: 121 ARIMIHQPASSFYDGRSGDFFRETRQIVKLRETLTKVYVQRT 162
>gi|197294136|ref|YP_002149757.1| clp protease proteolytic subunit [Cicer arietinum]
gi|197089824|gb|ACH41094.1| clp protease proteolytic subunit [Cicer arietinum]
Length = 197
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV + PG+ W+DL+N L++ER++F+GQ ++ E SNQ++ M+YL D +
Sbjct: 1 MPLGVPKVPFLVPGDDEASWIDLYNRLFQERLLFLGQEVNSEISNQLVGLMVYLSLEDKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG+V +AI+DTMQ +++ V T CVG A + +L GGE R A P
Sbjct: 61 KDLYLFINSPGGEVISGMAIFDTMQFVEAEVQTVCVGLAASMGSLILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQ + EA+ELL++R I +++T
Sbjct: 121 ARVMIHQPATSFYEGQTVECMLEANELLQMRRNITNIYAQRT 162
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++FIG+ ID+ +N ++A +L+L+S D K VY+
Sbjct: 4 PMVIEQT-GRGERAY-DIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVYV 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG +T LAIYDTMQ +K PV T C+G A +A LLAGGE G R A+P +RI L
Sbjct: 62 YINSPGGVITSGLAIYDTMQYIKCPVSTICIGQAASMAAVLLAGGEPGKRIALPSARIML 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI A E+LR+++ + L+ T
Sbjct: 122 HQPLGGAQGQAVDIEIHAREILRLKERLNDILTYHT 157
>gi|116072309|ref|ZP_01469576.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064831|gb|EAU70590.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 184
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%), Gaps = 12/160 (7%)
Query: 86 QWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL 145
+WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT L
Sbjct: 3 RWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGL 62
Query: 146 AIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQAD 204
AI+DT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA
Sbjct: 63 AIFDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQAS 122
Query: 205 DIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
DI EA E+LR++D + F+++ + TD + F
Sbjct: 123 DIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYF 162
>gi|340034221|ref|YP_004733784.1| clp protease proteolytic subunit [Acidosasa purpurea]
gi|309321641|gb|ADO65166.1| clp protease proteolytic subunit [Acidosasa purpurea]
Length = 216
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D++
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 RDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|229577779|ref|YP_002836115.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
gi|226933907|gb|ACO92040.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYR-LHRERLLFLGQEVDSEISNQLIGLMVYLSIEDEI 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + Q + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRT 161
>gi|313184018|ref|YP_004021175.1| clp protease proteolytic subunit [Castanea mollissima]
gi|309321545|gb|ADO65085.1| clp protease proteolytic subunit [Castanea mollissima]
Length = 196
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYI 220
+ R+ + PA + A + EA+E++++R+ I
Sbjct: 120 ARRVMIHQPASSFYEAPAGEFILEAEEMMKLRETI 154
>gi|309322359|ref|YP_003934209.1| ATP-dependent Clp protease proteolytic subunit [Cedrus deodara]
gi|307683285|dbj|BAJ19593.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Cedrus deodara]
Length = 196
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+RI + PA + G A D E+ + +RDYI K +T G
Sbjct: 121 ARIMIHQPASSYYDGPAADFHKESKHVTMLRDYITKCYIERTGNPG 166
>gi|374411904|gb|AEZ48936.1| clp protease proteolytic subunit, partial [Potarophytum riparium]
Length = 214
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 19/180 (10%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD------------------LWNALYRERVIFIGQNIDEE 109
MPIG PKV +R+PGE WVD L N LYRER++F+GQ +D E
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVPYASKGARMVSKGYYFVLINRLYRERLLFLGQEVDSE 60
Query: 110 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHL 169
SNQ++ M+YL D ++ +Y++IN PGG V P +AIYDTMQ + V T C+G A +
Sbjct: 61 ISNQLVGLMVYLSIEDATRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASM 120
Query: 170 AGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 GSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 180
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++F+G ID++ SN I+A +L+L++ D
Sbjct: 1 MPL-VPIVVEQTARGERSY---DIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG VT +AIYDTMQ ++ V T CVG A + LLA GEKG R A+P
Sbjct: 57 EKDIFLYINSPGGVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI +A E+LR+++ + L R T
Sbjct: 117 HSRIMIHQPLGGAQGQATDIEIQAREILRIKEMLNDILVRHT 158
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 98/140 (70%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER++F+G ID+ S+ I+A L+L++ D K +Y+YIN PGG +T +AI+
Sbjct: 27 DIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKDIYLYINSPGGYITAGMAIF 86
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM +K V T C+G A + FLLAGG+KG RSA+P SRI + P G A GQA DI+
Sbjct: 87 DTMNYIKPDVATICMGQASSMGAFLLAGGKKGKRSALPNSRIMIHQPMGGAEGQASDIKI 146
Query: 209 EADELLRVRDYIFKELSRKT 228
+ADE++R+R + K L+++T
Sbjct: 147 QADEIIRLRGKLNKLLAKQT 166
>gi|353351842|ref|YP_004891725.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Picea
morrisonicola]
gi|347977505|dbj|BAK86462.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Picea
morrisonicola]
Length = 196
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDIMQIIVPDVHTICMGIAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G A D E+ + +RDYI K +T
Sbjct: 121 ARVMIHQPASSYYDGPAADFHTESKHVTMLRDYITKCYIERT 162
>gi|139387476|ref|YP_001122831.1| clp protease proteolytic subunit [Phaseolus vulgaris]
gi|160380561|sp|A4GGD0.1|CLPP_PHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112030998|gb|ABH88110.1| clp protease proteolytic subunit [Phaseolus vulgaris]
Length = 195
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDILINRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ I PA + QA + EA+ELL++R+ I + ++T
Sbjct: 121 HAMI--HQPASSFYEAQAGEFILEAEELLKMRETITRVYVQRT 161
>gi|33865835|ref|NP_897394.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460510|sp|Q7U6N7.1|CLPP2_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33633005|emb|CAE07816.1| ATP-dependent Clp protease proteolytic subunit 1 [Synechococcus sp.
WH 8102]
Length = 197
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L +++ + +ELS +T
Sbjct: 123 PLGGARGQASDIRIQADEILYLKERLNQELSDRT 156
>gi|69214833|gb|AAZ03799.1| ATP-depedent Clp protease proteolytic subunit [Acorus americanus]
Length = 195
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDI-NRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRT 161
>gi|116256436|sp|Q3AJN8.2|CLPP2_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 197
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DIR +ADE+L +++ + KELS +T
Sbjct: 115 HSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRT 156
>gi|78212970|ref|YP_381749.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|78197429|gb|ABB35194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
Length = 218
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 25 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 83
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 84 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 143
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DIR +ADE+L +++ + KELS +T
Sbjct: 144 PLGGAQGQASDIRIQADEILFLKERLNKELSDRT 177
>gi|222084109|ref|YP_002519561.1| ATP-dependent Clp protease proteolytic subunit [Keteleeria
davidiana]
gi|220983661|dbj|BAH11427.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Keteleeria davidiana]
Length = 196
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 QDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D E+ + +RDYI K +T G
Sbjct: 121 ARVMIHQPASSYYDGPAADFHKESQHVTMLRDYITKCYIERTGNSG 166
>gi|301353344|ref|YP_003795605.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
gi|301016262|gb|ADK47549.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
Length = 205
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE VD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V ++ YD MQ + V T C+G A + +LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISAYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E ++RD K +++T
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCTTKVYAQRT 162
>gi|374411914|gb|AEZ48941.1| clp protease proteolytic subunit, partial [Streptochaeta
angustifolia]
Length = 206
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTCRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R +A + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARAPEFLLEVEELHKVREMITRVYALRT 162
>gi|374411871|gb|AEZ48920.1| clp protease proteolytic subunit, partial [Flagellaria indica]
Length = 193
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVI-FIGQNIDEEFSNQILATMLYLDSVDD 126
MP+G PKV +R PGE WVDL N LYRER++ F+GQ I E +NQI+ M+YL D
Sbjct: 1 MPVGVPKVPFRIPGEEDATWVDL-NRLYRERLLFFLGQEIYSEIANQIVGLMVYLSIEDK 59
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K ++++IN PGG V +AIYDTMQ + V T C+G A +A F+L GGE R A P
Sbjct: 60 TKDLFLFINSPGGWVISGIAIYDTMQMVAPDVHTICMGIAASMASFVLLGGEVTKRIAFP 119
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA A R + ++ EA+EL+++R+ I +KT
Sbjct: 120 HARVMIHQPASAFYRAKVGEVFLEAEELIKLRETITMVYVQKT 162
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L ++R+IF+GQ ID+ +N ++A +L+L+S D K +++
Sbjct: 4 PMVIEQS-GRGERAY-DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHL 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG ++ LAIYDTMQ +KSPV T C+G A +A LLAGG G R A+P +R+ +
Sbjct: 62 YINSPGGVISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMI 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A GQA DI A E+L++R+ I L + T
Sbjct: 122 HQPLGGAHGQATDIEIHAKEILKIREKINDILVKHT 157
>gi|260435297|ref|ZP_05789267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|260413171|gb|EEX06467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 205
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 12 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 70
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 71 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 130
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DIR +ADE+L +++ + KELS +T
Sbjct: 131 PLGGAQGQASDIRIQADEILFLKERLNKELSDRT 164
>gi|441480359|gb|AGC38270.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Cryptochloa strictiflora]
Length = 216
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R +A + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARAPEFLLEVEELHKVREMITRIYALRT 162
>gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 196
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIFLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLR 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L +++ + +ELS +T
Sbjct: 115 HSRIMIHQPLGGARGQASDIRIQADEILFLKNRLNQELSERT 156
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 104/157 (66%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V RT GE + D+++ L +R+IF+G I+E+ +N ++A ML+L++ D ++ +Y
Sbjct: 10 PTVTERTSHGERVY---DIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIY 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ +KSPV T C G A +A +LA GE+G R +P SR+
Sbjct: 67 LYINSPGGIVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRYCLPNSRVL 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A GQA DI +A E+L+V+D + + L++ T
Sbjct: 127 IHQPLGGAEGQATDIAIQAKEILKVKDTLNQILAKHT 163
>gi|69214837|gb|AAZ03801.1| ATP-depedent Clp protease proteolytic subunit [Nuphar advena]
Length = 196
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDI-NRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 119
Query: 188 S-RIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ R+ + PA + QA + EA+ELL++R+ + + ++T
Sbjct: 120 ARRVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRT 162
>gi|413939036|gb|AFW73587.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939037|gb|AFW73588.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939038|gb|AFW73589.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939039|gb|AFW73590.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
Length = 216
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|87302740|ref|ZP_01085551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282623|gb|EAQ74581.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 196
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+++A +L+L++ D K +++YI
Sbjct: 4 IVIEDSGRGERAF-DIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLTAGAKGKRSSLHHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++D + +ELS +T
Sbjct: 123 PLGGARGQASDIRIQADEILYLKDKLNRELSDRT 156
>gi|452995870|emb|CCQ92258.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 197
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N ++A +L+L + D K +
Sbjct: 3 VPMVIDQTNRGERAY---DIYSRLLKDRIIVLGSEIDDANANLVVAQLLFLAAEDPDKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T +AIYDTMQ +K PV T C+G A + FLLA GEKG R A+P S +
Sbjct: 60 YLYINSPGGSITAGMAIYDTMQFIKPPVSTICIGIAASMGAFLLAAGEKGKRYALPNSEV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR AD +LR R+ I + L+ +T
Sbjct: 120 MIHQPLGGVRGQAEDIRIHADWILRTREKINQILAERT 157
>gi|48478794|ref|YP_024401.1| ATP-dependent Clp protease proteolytic subunit [Saccharum hybrid
cultivar SP-80-3280]
gi|50812552|ref|YP_054654.1| ATP-dependent Clp protease proteolytic subunit [Saccharum hybrid
cultivar NCo 310]
gi|118614516|ref|YP_899432.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|260677443|ref|YP_003208211.1| clp protease proteolytic subunit [Coix lacryma-jobi]
gi|68052134|sp|Q6ENT9.1|CLPP_SACOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|75291219|sp|Q6L377.1|CLPP_SACHY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125863811|sp|A1E9U9.1|CLPP_SORBI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48478696|gb|AAT44716.1| ATP-dependent Clp protease subunit [Saccharum hybrid cultivar
SP80-3280]
gi|49659536|dbj|BAD27317.1| ATP-dependent protease [Saccharum hybrid cultivar NCo 310]
gi|118201150|gb|ABK79520.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|209361381|gb|ACI43296.1| clp protease proteolytic subunit [Coix lacryma-jobi]
gi|414870043|tpg|DAA48600.1| TPA: hypothetical protein ZEAMMB73_225418 [Zea mays]
Length = 216
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|118430326|ref|YP_874761.1| ATP-dependent Clp protease proteolytic subunit [Agrostis
stolonifera]
gi|125863779|sp|A1EA33.1|CLPP_AGRST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201235|gb|ABK79604.1| clp protease proteolytic subunit [Agrostis stolonifera]
Length = 216
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I K + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITKVYALRT 162
>gi|156085810|ref|XP_001610314.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis T2Bo]
gi|154797567|gb|EDO06746.1| ATP-dependent Clp protease proteolytic subunit, putative [Babesia
bovis]
Length = 245
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 102/166 (61%)
Query: 64 RIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
++ M P+G P V Y+ PG ++ D+ LYRER++F+ Q++DE ++N I+ T+L LDS
Sbjct: 43 KLFMTPLGVPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDS 102
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
+ K + +YIN GG T + +YDT++ LKS + T VGF A LLA G G RS
Sbjct: 103 DSNEKPITLYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRS 162
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
A+P SR+ + PAG G A+ IR++A +L ++ + K S+ T+
Sbjct: 163 ALPHSRVVMHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTN 208
>gi|427701944|ref|YP_007045166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
gi|427345112|gb|AFY27825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
Length = 196
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+++A +L+L++ D K +++Y+
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYV 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLSHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++D + +EL+ +T
Sbjct: 123 PLGGARGQASDIRIQADEILYLKDKLNRELASRT 156
>gi|118430411|ref|YP_874677.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
gi|126302533|sp|P48883.2|CLPP_HORVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201065|gb|ABK79436.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|116070498|ref|ZP_01467767.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116065903|gb|EAU71660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 197
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A GQA DIR +ADE+L ++D + ELS +T
Sbjct: 115 HSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRT 156
>gi|406917391|gb|EKD56197.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 195
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 106/158 (67%), Gaps = 5/158 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P VL +T GE ++ D+++ L +ER++FIG I +E +N ++A +L+LDS +D K +
Sbjct: 10 VPMVLEKTQFGERAY---DIYSRLLKERIVFIGGPISDELANTVIAQLLFLDS-EDKKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +KS V T C+G A + FLL+GG K R A+P ++I
Sbjct: 66 QLYINSPGGSVTAGLAIYDTMQYIKSDVSTICIGIAASMGAFLLSGGAKDKRLALPNAKI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ G GQA DI+ +A+E++RV++ I K L+++T
Sbjct: 126 MIHQVMGGFEGQAADIKIQAEEIIRVKNQINKILAKQT 163
>gi|374249644|ref|YP_005089171.1| clpP gene product [Rhynchoryza subulata]
gi|346228496|gb|AEO21368.1| clp protease proteolytic subunit [Rhynchoryza subulata]
Length = 216
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILVGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|11466814|ref|NP_039410.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|12012|emb|CAA33972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|226633|prf||1603356BG ORF 216
Length = 216
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D S
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A + F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPNIYTTCLGIAASMPSFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|78184632|ref|YP_377067.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013818|sp|Q3AY04.1|CLPP1_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78168926|gb|ABB26023.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 197
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A GQA DIR +ADE+L ++D + ELS +T
Sbjct: 115 HSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRT 156
>gi|69214835|gb|AAZ03800.1| ATP-depedent Clp protease proteolytic subunit [Ginkgo biloba]
Length = 201
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D+E +NQ++ M+Y + D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQQVDDEIANQLIGIMMYPNGEDEN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 60 KDIYTYINSPGGTVIPGISLYDAMQFVVPDVHTICMGLAASMGSSVSTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I ++T
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 161
>gi|124025671|ref|YP_001014787.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|123960739|gb|ABM75522.1| Clp protease subunit [Prochlorococcus marinus str. NATL1A]
Length = 205
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 105/163 (64%), Gaps = 6/163 (3%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
+M+PI + G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D
Sbjct: 9 SMIPI-----VIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADD 62
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +++YIN PGG V L I+DTMQ +K + T CVG A + FLL G KG RS++
Sbjct: 63 PDKDIFLYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSL 122
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L ++D + KELS +T
Sbjct: 123 LHSRIMIHQPLGGARGQASDIRIQADEILFIKDKLNKELSDRT 165
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ +D+E +N I+A MLYL++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ GEKG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQQLNHYLAEHT 156
>gi|374249291|ref|YP_005088034.1| clpP gene product [Leersia tisserantii]
gi|346228328|gb|AEO21202.1| clp protease proteolytic subunit [Leersia tisserantii]
Length = 216
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRSEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPR 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ + + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMVTRVYALRT 162
>gi|72382132|ref|YP_291487.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|115311342|sp|Q46L44.1|CLPP1_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|72001982|gb|AAZ57784.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 196
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K + T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++D + KELS +T
Sbjct: 123 PLGGARGQASDIRIQADEILFIKDKLNKELSDRT 156
>gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 196
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIFLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLR 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L +++ + +EL+ +T
Sbjct: 115 HSRIMIHQPLGGARGQASDIRIQADEILFLKNRLNQELAERT 156
>gi|156085800|ref|XP_001610309.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis
T2Bo]
gi|154797562|gb|EDO06741.1| ATP-dependent Clp protease proteolytic subunit , putative [Babesia
bovis]
Length = 200
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 100/163 (61%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M P+G P V Y+ PG ++ D+ LYRER++F+ Q++DE ++N I+ T+L LDS +
Sbjct: 1 MTPLGVPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN GG T + +YDT++ LKS + T VGF A LLA G G RSA+P
Sbjct: 61 EKPITLYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
SR+ + PAG G A+ IR++A +L ++ + K S+ T+
Sbjct: 121 HSRVVMHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTN 163
>gi|426406663|ref|YP_007026577.1| clp protease proteolytic subunit [Festuca ovina]
gi|410177877|gb|AFV62757.1| clp protease proteolytic subunit [Festuca ovina]
Length = 214
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|253729580|ref|YP_003029763.1| ClpP [Bambusa oldhamii]
gi|340034474|ref|YP_004734125.1| clp protease proteolytic subunit [Bambusa emeiensis]
gi|345895242|ref|YP_004841973.1| clp protease proteolytic subunit [Panicum virgatum]
gi|246367090|gb|ACS94701.1| ClpP [Bambusa oldhamii]
gi|307697231|gb|ADN86070.1| clp protease proteolytic subunit [Chasmanthium latifolium]
gi|309321977|gb|ADO65498.1| clp protease proteolytic subunit [Bambusa emeiensis]
gi|319412344|gb|ADV41880.1| clp protease proteolytic subunit (chloroplast) [Panicum virgatum]
gi|319412430|gb|ADV41965.1| clp protease proteolytic subunit (chloroplast) [Panicum virgatum]
gi|337730834|gb|AEI70761.1| clp protease proteolytic subunit [Puelia olyriformis]
gi|374411869|gb|AEZ48919.1| clp protease proteolytic subunit, partial [Eleusine coracana]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|14017596|ref|NP_114282.1| ATP-dependent Clp protease proteolytic subunit [Triticum aestivum]
gi|17374148|sp|P24064.2|CLPP_WHEAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13928229|dbj|BAB47058.1| ATP-dependent protease proteolytic subunit [Triticum aestivum]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYAVRT 162
>gi|318041532|ref|ZP_07973488.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 196
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEPVTSESANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLT 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L ++ + +EL+ +T
Sbjct: 115 HSRIMIHQPLGGARGQASDIRIQADEILYLKKKLNQELADRT 156
>gi|159106888|ref|YP_001531306.1| clpP gene product (chloroplast) [Lolium perenne]
gi|427436999|ref|YP_007026491.1| clp protease proteolytic subunit [Festuca altissima]
gi|427437096|ref|YP_007026663.1| clp protease proteolytic subunit [Festuca pratensis]
gi|427437242|ref|YP_007026749.1| clp protease proteolytic subunit [Lolium multiflorum]
gi|158934422|emb|CAO86000.1| clp protease proteolytic subunit (chloroplast) [Lolium perenne]
gi|410177790|gb|AFV62671.1| clp protease proteolytic subunit [Festuca altissima]
gi|410177964|gb|AFV62843.1| clp protease proteolytic subunit [Festuca pratensis]
gi|410178051|gb|AFV62929.1| clp protease proteolytic subunit [Lolium multiflorum]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE ++ D+++ L ++R++FIG ID+E +N ++A +L+L+S D
Sbjct: 1 MPL-IPMVIEQTSRGERAF---DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + YIN PGG V+ +AIYDTMQ +KS + T C+G A + FLLA G KG R ++P
Sbjct: 57 DKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI +A E+LR++D + + L+ T
Sbjct: 117 NSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHT 158
>gi|290790864|gb|ADD63120.1| clp protease proteolytic subunit [Microlaena stipoides]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRGEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|452849507|ref|YP_007475164.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Arundinaria gigantea]
gi|441480275|gb|AGC38187.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Arundinaria gigantea]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|339906475|ref|YP_004733268.1| clp protease proteolytic subunit [Indocalamus longiauritus]
gi|309321808|gb|ADO65331.1| clp protease proteolytic subunit [Indocalamus longiauritus]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|50233996|ref|YP_052774.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|109156611|ref|YP_654230.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|378758438|ref|YP_005296442.1| clpP gene product (chloroplast) [Oryza meridionalis]
gi|386799194|ref|YP_006280783.1| clpP gene product (chloroplast) [Oryza rufipogon]
gi|68052132|sp|Q6ENE9.1|CLPP_ORYNI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841130|sp|P0C312.1|CLPP_ORYSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841131|sp|P0C313.1|CLPP_ORYSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841132|sp|P0C314.1|CLPP_ORYSJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|42795503|gb|AAS46070.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|42795570|gb|AAS46136.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|42795634|gb|AAS46199.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|49615020|dbj|BAD26803.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|290790590|gb|ADD62850.1| clp protease proteolytic subunit [Oryza sativa Japonica Group]
gi|290790659|gb|ADD62918.1| clp protease proteolytic subunit [Oryza meridionalis]
gi|290790728|gb|ADD62986.1| clp protease proteolytic subunit [Oryza australiensis]
gi|336326862|gb|AEI53040.1| clp protease proteolytic subunit (chloroplast) [Oryza meridionalis]
gi|336326938|gb|AEI53115.1| clp protease proteolytic subunit (chloroplast) [Oryza rufipogon]
gi|336327016|gb|AEI53192.1| clp protease proteolytic subunit (chloroplast) [Oryza rufipogon]
gi|353685078|gb|AER12843.1| clp protease proteolytic subunit (chloroplast) [Oryza sativa Indica
Group]
gi|353685166|gb|AER12930.1| clp protease proteolytic subunit (chloroplast) [Oryza sativa Indica
Group]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE SW DL++ L +ER+IF+G ID++ +N ++A +LYL S D +K +
Sbjct: 27 PAVVESTPRGERSW---DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQ 83
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG + LAIYDTMQ L+ V T C+G A + +LA G+KG R +P S +
Sbjct: 84 MYINSPGGVIYAGLAIYDTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVL 143
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A GQA DI A E+LR+R +++ L++ T
Sbjct: 144 IHQPLGGAEGQAADIEITAREILRLRRNLYEILAKHT 180
>gi|255961406|ref|YP_003097599.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
gi|255040283|gb|ACT99943.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
Length = 216
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFFLEVEELHKVREMITRVYALRT 162
>gi|87124411|ref|ZP_01080260.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
gi|86167983|gb|EAQ69241.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
Length = 196
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++
Sbjct: 55 DKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L ++D + +EL+ ++
Sbjct: 115 HSRIMIHQPLGGARGQASDIRIQADEILFLKDKLNRELAERS 156
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 102/148 (68%), Gaps = 2/148 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G I +E++N ++A +L+LD+ + + +Y+
Sbjct: 5 PVVIEQT-GRGERSY-DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ +K+ V T CVG A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYI 220
P G A GQA DI +A E+L++++ +
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLKEVL 150
>gi|340034050|ref|YP_004733602.1| clp protease proteolytic subunit [Phyllostachys edulis]
gi|340034389|ref|YP_004734002.1| clp protease proteolytic subunit [Phyllostachys nigra var. henonis]
gi|340034560|ref|YP_004734209.1| clp protease proteolytic subunit [Ferrocalamus rimosivaginus]
gi|374249375|ref|YP_005088557.1| clpP gene product (chloroplast) [Phyllostachys propinqua]
gi|307133910|gb|ADN32915.1| clp protease proteolytic subunit [Phyllostachys nigra var. henonis]
gi|309321725|gb|ADO65249.1| clp protease proteolytic subunit [Ferrocalamus rimosivaginus]
gi|309321892|gb|ADO65414.1| clp protease proteolytic subunit [Phyllostachys edulis]
gi|346228412|gb|AEO21285.1| clp protease proteolytic subunit (chloroplast) [Phyllostachys
propinqua]
Length = 216
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 102/148 (68%), Gaps = 2/148 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G I +E++N ++A +L+LD+ + + +Y+
Sbjct: 5 PVVIEQT-GRGERSY-DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ +K+ V T CVG A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYI 220
P G A GQA DI +A E+L++++ +
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLKEIL 150
>gi|255994401|ref|ZP_05427536.1| Clp protease [Eubacterium saphenum ATCC 49989]
gi|255993114|gb|EEU03203.1| Clp protease [Eubacterium saphenum ATCC 49989]
Length = 196
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
TP V+ + GE S+ D+++ L R+R+IFIG+ I+ ++ I+A +L+L++ D SK +
Sbjct: 4 TPIVIEKDGSGERSF---DIYSRLLRDRIIFIGEPIESNMASSIIAQLLFLEAEDSSKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGGDVT LAIYDTMQ +K V T CVG A +A LL GEKG R A+P S I
Sbjct: 61 CIYINSPGGDVTSGLAIYDTMQFIKPQVQTVCVGMAASMAAVLLLAGEKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A GQA +I+ A+ +++ RD + + +S+ T
Sbjct: 121 MIHQPMGGASGQASEIKIAAEHIIKTRDKLNRLISKHT 158
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+W+ L ++R IFIG ID+ +N ++A ML+L++ D K +
Sbjct: 5 VPIVIEQTSRGERSY---DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R ++P +RI
Sbjct: 62 HLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR+RD + + L++ T
Sbjct: 122 MIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHT 159
>gi|290790797|gb|ADD63054.1| clp protease proteolytic subunit [Potamophila parviflora]
Length = 216
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++ +IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFFFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTPKGERSY---DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE S+ D+++ L RER++ + ID+ SN I+A +LYL+S + + +
Sbjct: 8 PMVIEHTPRGERSF---DIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQPIS 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN GG VT LAIYDTMQ +++P+ T CVG A +A LLA GEKG+R ++P SRI
Sbjct: 65 MYINSQGGVVTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNSRIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L P+G +GQA DIR A+E+ R+ + K ++ T
Sbjct: 125 LHQPSGGFQGQASDIRIHAEEIARLSKRLNKIYAKHT 161
>gi|194033171|ref|YP_002000510.1| ATP-dependent Clp protease proteolytic subunit [Brachypodium
distachyon]
gi|357111644|ref|XP_003557622.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Brachypodium distachyon]
gi|357166335|ref|XP_003580676.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Brachypodium distachyon]
gi|193075579|gb|ACF08662.1| ATP-dependent protease proteolytic subunit (chloroplast)
[Brachypodium distachyon]
Length = 216
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYQIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|156598329|gb|ABU85425.1| clp protease proteolytic subunit [Musa acuminata]
Length = 195
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVDL N L+RER++F+GQ ++ E SNQI+ M+YL D++
Sbjct: 1 MPVGVPKVPFRSPGEEDAVWVDL-NRLHRERLLFLGQEVNSEISNQIVGLMVYLSIEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLFLFINSPGGWVVSGIAIYDTMQFVPPDVHTICMGLAASMGSFILIGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + + + E +ELL++R+ + K ++T
Sbjct: 120 ARVMIHQPASSFYESRTGEFVLEMEELLKLRETLTKVYVQRT 161
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTPKGERSY---DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 196
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLTHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++ + +EL+ +T
Sbjct: 123 PLGGARGQASDIRIQADEILYLKQKLNQELADRT 156
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER+IF+GQ +D+E N I+A MLYL++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + LS T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQQLNHYLSEHT 156
>gi|116074798|ref|ZP_01472059.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068020|gb|EAU73773.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 196
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A GQA DIR +ADE+L ++D + +EL+ ++
Sbjct: 123 PLGGASGQASDIRIQADEILFLKDKLNRELAERS 156
>gi|302824555|ref|XP_002993920.1| hypothetical protein SELMODRAFT_137715 [Selaginella moellendorffii]
gi|300138287|gb|EFJ05061.1| hypothetical protein SELMODRAFT_137715 (mitochondrion) [Selaginella
moellendorffii]
Length = 224
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 12/172 (6%)
Query: 69 PIGTPKVLYRTPGEGSWQWVDLW-----------NALYRERVIFIGQNIDEEFSNQILAT 117
PIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+
Sbjct: 9 PIGVPKVSFRISGEEDMVRIDTHCPVHRRQPIPTNRLYRERLLFLGQNMDDEIANQIICI 68
Query: 118 MLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGG 177
M+YL+ + SK +Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG
Sbjct: 69 MMYLNGENRSKDIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGG 128
Query: 178 EKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
R A+P +R+ + PA + GQA + EA+E+L++RD I +RKT
Sbjct: 129 GITKRIALPHARVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKT 180
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M + P V+ +T G G + D+++ L ++R+IF+G I+E +N ++A ML+L+S D
Sbjct: 1 MKMLVPIVIEQT-GRGERAY-DIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPD 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT L IYDTMQ +K PV T CVG A +A LLA G KG R A+P
Sbjct: 59 KDINLYINSPGGSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPN 118
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
SR+ L P G +GQA DI A E+ ++RD + + ++ T+ +
Sbjct: 119 SRVMLHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAYHTNQD 162
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K +
Sbjct: 4 VPIVVEQTNRGERAY---DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT +AIYDTMQ ++SPV T C+G A +A LLA G KG R ++P +RI
Sbjct: 61 QFYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR+R ++ + LSR T
Sbjct: 121 LIHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHT 158
>gi|456061580|ref|YP_007475729.1| clp protease proteolytic subunit [Zingiber spectabile]
gi|449326208|gb|AGE92793.1| clp protease proteolytic subunit [Zingiber spectabile]
Length = 216
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 103/170 (60%), Gaps = 9/170 (5%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD--------LWNALYRERVIFIGQNIDEEFSNQILATML 119
MP+G PKV +R PGE WV+ L N LYRER++F+GQ + EE SN I+ M+
Sbjct: 1 MPVGVPKVPFRNPGEEDATWVEGLKDRIFVLINRLYRERLLFLGQEVKEEISNTIVGLMV 60
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L D ++ +Y++IN PGG + P +AI+DTMQ + V T C+G A +A F+L GGE
Sbjct: 61 FLSIEDHTRDLYLFINSPGGCIIPGIAIFDTMQFVTPDVHTICMGIAASMASFILVGGEI 120
Query: 180 GNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
R A P +RI + PA + G++ D E +++++R+ + K ++T
Sbjct: 121 TKRLAFPHARIMIHQPASSFYDGKSGDFLRETRQIVKLRETLTKVYVQRT 170
>gi|295065752|ref|YP_003587692.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
gi|251765276|gb|ACT15430.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
Length = 219
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E + I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEDATWVDLYNVMYRERTLFLGQEIRAEITGHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+Y++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIYLFINSPGGWLISGMAIFDTMQTVTPDIYTICIGIAASMASFILLGGEPACRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R L PA A R + + E +EL +V+D I + + +T
Sbjct: 121 ARNMLHQPASAYYRARTREFFAEVEELHKVKDMITRVYALRT 162
>gi|328950943|ref|YP_004368278.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451267|gb|AEB12168.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 194
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 99/140 (70%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N ++A +L+L++ + ++ + +YIN PGG+V LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDTQVANTVVAQILFLEAQNPNQEIKLYINSPGGEVDAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T CVG A +A +LA GE G R A+P SR+ + P G ARGQA DI
Sbjct: 78 DTMQYVRAPVSTICVGLAASMAAVILAAGEPGRRYALPHSRVMIHQPWGGARGQAADIAI 137
Query: 209 EADELLRVRDYIFKELSRKT 228
EA+++L++R+ + K LS+ T
Sbjct: 138 EAEQILKMRENLNKILSQHT 157
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + +D+++ L RER++F+G ID+ ++ I+A +L+L++ D K +Y
Sbjct: 22 VPYVIEQT-GRGE-RGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFLEAEDPDKDIY 79
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAIYDTM+ ++S V T CVG A + LLAGGE G RSA+P S+I
Sbjct: 80 LYINSPGGSVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVLLAGGEAGKRSALPHSKIM 139
Query: 192 LDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQ DI A E+++ RD I+K L+ T
Sbjct: 140 IHQPWVGGLQGQTTDIEIHAKEMIKTRDTIYKILAEHT 177
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 11/182 (6%)
Query: 44 YGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIG 103
+ R+ L IRN K +A++P+ + + GE S+ D+++ L +ER+IF+
Sbjct: 6 FDRIAVFLRFRIRNPK-----MAVIPMVVEQT---SKGERSY---DIYSRLLKERIIFLN 54
Query: 104 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCV 163
+++ +N I+A +L+L+S D K +Y+YIN PGG VT LAIYDTM +K V T C
Sbjct: 55 GEVEDHMANLIVAQLLFLESEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCT 114
Query: 164 GFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKE 223
G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + K
Sbjct: 115 GQACSMGAFLLSGGAKGKRFALPHARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTKR 174
Query: 224 LS 225
++
Sbjct: 175 MA 176
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L ++R+IF+G ID+ +N ++A +L+L+S D K ++
Sbjct: 4 VPMVVEQS-GRGERAY-DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ +K V T C+G A + LLA G KG R A+P SRI
Sbjct: 62 LYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQ+ DI+ +A E+LR+R+ + + LSR T
Sbjct: 122 IHQPLGGAQGQSTDIQIQAREILRIRETLNEILSRHT 158
>gi|297608276|ref|NP_001061378.2| Os08g0252200 [Oryza sativa Japonica Group]
gi|40253575|dbj|BAD05521.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|255678293|dbj|BAF23292.2| Os08g0252200 [Oryza sativa Japonica Group]
Length = 216
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAICDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|295137023|ref|YP_003587570.1| ATP-dependent Clp protease proteolytic subunit [Pisum sativum]
gi|293338595|gb|ADE43568.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pisum
sativum]
Length = 199
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 103/168 (61%), Gaps = 4/168 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV + PG+ W+DL++ L+ +R++F+GQ ++ E SNQ+ M+YL +
Sbjct: 1 MPVGVPKVGFEVPGDDEASWIDLYHQLFFDRLLFLGQEVESEISNQVCGMMIYLSLENKY 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++I PGG+V LAI+D MQ +++ V T CVG A +A +L GGE R A P
Sbjct: 61 KNLYLFIKSPGGEVLSGLAIFDIMQFVEAEVQTVCVGLAASMASLILLGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDY---IFKELSRKTDYE 231
+R+ + PA +A GQ+ + EA ELL +R I+ + +RK ++
Sbjct: 121 ARVMIHQPASSAYDGQSGECMLEAHELLSIRQTMTNIYCQRTRKPSWQ 168
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+ P V+ T G + D+++ L ++R+I +G ID+ ++ I A +L+L+S D K
Sbjct: 2 VAIPMVI-ETTGRTERAY-DIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKE 59
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+YMYIN PGG VT +AIYDTMQ + +PV T C+G A +A LL GEKG R ++P SR
Sbjct: 60 IYMYINSPGGVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMRYSLPHSR 119
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
I + P G A+GQA DI A E+LR++D + ++R T
Sbjct: 120 ILIHQPLGGAQGQASDISIHAKEILRMKDELNGIMARHT 158
>gi|289066851|ref|YP_003434369.1| clp protease proteolytic subunit [Vigna radiata]
gi|259020038|gb|ACV90236.1| clp protease proteolytic subunit [Vigna radiata]
Length = 194
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +R PG+ W+D L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRIPGDRDAAWIDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + ++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ I PA + QA + EA+ELL++R+ I ++T
Sbjct: 121 HAMI--HQPASSFYEAQAGEFVLEAEELLKLRETITNVYVQRT 161
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMP+ V Y +G + + D++ L ER+IF+G +D+E SN ++A +L+L+S D
Sbjct: 5 MMPV----VPYVVENKGRGERIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQD 60
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K + +YIN PGG VT LAIYDTMQ +K V T C+G A +A +LAGG KG R A+
Sbjct: 61 PDKDISIYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFAL 120
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
P SRI + P G A G A DI ELL +RD I + LS T+
Sbjct: 121 PHSRIMIHQPWGGAEGTAKDIEIRTRELLFIRDQINEILSHHTN 164
>gi|153012188|ref|YP_001381704.1| clp protease proteolytic subunit [Medicago truncatula]
Length = 193
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ P E WVDL+N L++ER++F+GQ ++ E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSLEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG+V +AI+D MQ +++ V T CVG A + LL GGE R A P
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+ I PA + GQ + EA+ELL++R I +++T
Sbjct: 121 AMI--HQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRT 160
>gi|352093978|ref|ZP_08955149.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351680318|gb|EHA63450.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 209
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +++Y+
Sbjct: 17 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFLYV 75
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 76 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQ 135
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A GQA DIR +ADE+L ++D + ELS +T
Sbjct: 136 PLGGASGQASDIRIQADEILFLKDRLNHELSDRT 169
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D+ SN I+A ML+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT +AIYDTMQ ++ V T CVG A + FLLAGG G R ++P +RI +
Sbjct: 61 YVNSPGGSVTAGMAIYDTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 121 HQPLGGAQGQAADIEIQAKEILYHKQRLNELLASHT 156
>gi|119774361|ref|YP_927101.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
amazonensis SB2B]
gi|171704645|sp|A1S4X5.1|CLPP_SHEAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119766861|gb|ABL99431.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
amazonensis SB2B]
Length = 202
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S + K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESENPDKEI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPKVSTVCIGQACSMGAFLLAGGEKGMRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++ + + LS T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHT 167
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R+I++G+ ID E +N I+ +LYLDS D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + IYDTM+ ++ V T C+G A + FLL+GG KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ Y+ + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKYLNECLAEHT 156
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER++FIG IDE +N ++A +LYL++ D K + +YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPGGLVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DT+Q +K V T CVG A +A LLA G KG R A+ SRI L P GA +GQA ++
Sbjct: 80 DTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQPIGAFQGQATEVEI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ I + LS+ T
Sbjct: 140 QAKEILRLREIITEILSQHT 159
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIY
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEI 136
Query: 209 EADELLRVRDYI-----------FKELSRKTDYEGF 233
+A E+L +++ + + + R TD + F
Sbjct: 137 QAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNF 172
>gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 196
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DIR +ADE+L ++ + +ELS +T
Sbjct: 123 PLGGAQGQASDIRIQADEILYLKKKLNQELSDRT 156
>gi|408792290|ref|ZP_11203900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463700|gb|EKJ87425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
Length = 200
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G Q+ D+++ L ++R+IF+G IDE ++N I A +L+L++ + + +Y+
Sbjct: 6 PYVIEQT-SRGERQY-DIFSRLLKDRIIFLGSAIDETYANVISAQLLFLEAENPDRDIYL 63
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ +K V T C+G A +A LLAGG KG RSA+P SRI L
Sbjct: 64 YINSPGGYVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNSRIML 123
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A GQA DI A E+++++D + R T
Sbjct: 124 HQPYGGAGGQASDIEISAKEIIKIKDKLIDLYGRHT 159
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIY
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEI 136
Query: 209 EADELLRVRDYI-----------FKELSRKTDYEGF 233
+A E+L +++ + + + R TD + F
Sbjct: 137 QAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNF 172
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G I++ +N ++A ML+L+S D K +
Sbjct: 3 VPIVIEQT-GRGERAY-DIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDIN 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT L IYDTMQ +K P+ T CVG A +A LLA G KG R A+P SR+
Sbjct: 61 LYINSPGGSVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRIALPNSRVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
L P G +GQA DI A E+ ++RD + + +++ T+ +
Sbjct: 121 LHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAKHTNQD 160
>gi|12336|emb|CAA38354.1| proteolytic subunit of ATP-dependent protease [Triticum aestivum]
Length = 216
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR P + WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPRDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTRCLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPESLLEVEELHKVREMITRVYAVRT 162
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 12/170 (7%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ ID +N I+A +LYLDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI-------FKELSRKTDYEGF 233
P G A+GQA DI +A E+L R+ +Y+ F+++S T+ + F
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFF 172
>gi|11467216|ref|NP_043048.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|1168978|sp|P26567.2|CLPP_MAIZE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|902246|emb|CAA60310.1| clpP [Zea mays]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN GG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSLGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +VR+ I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRT 162
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|406981698|gb|EKE03119.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L RER+IF+G ID++ +N ++A +L+LD+ + K +
Sbjct: 10 VPMVIEQS-GRGERSF-DIFSRLLRERIIFLGTEIDDQVANLMVAQLLFLDAENPEKDIV 67
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG ++ LAIYDTMQ +++ + T C+G A + FLLA G G R ++P SRI
Sbjct: 68 MYINSPGGVISAGLAIYDTMQHVRADIATMCIGEAASMGSFLLAAGTAGKRMSLPHSRIM 127
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G ARGQA DI EA E+ R++ + + L++ T
Sbjct: 128 IHQPSGGARGQASDIMLEAAEIARIKRQMNELLAKHT 164
>gi|254553625|gb|ACT67271.1| clp protease proteolytic subunit [Joinvillea plicata]
gi|374411882|gb|AEZ48925.1| clp protease proteolytic subunit, partial [Joinvillea ascendens]
Length = 218
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER +F+GQ + E +N I M+YL D
Sbjct: 1 MPVGVPKVPFRIPGDEEATWVDLYNRLYRERTLFLGQEVRCEITNNITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTM ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 SDLFLFINSPGGWIMSGMAIFDTMSTVTPDVYTICIGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYI 220
+RI L PA A R + + EA+EL +VR+ I
Sbjct: 121 ARIMLHQPASAYYRTRTGEFVLEAEELTKVREMI 154
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G I+++ +N ++A +L+L+S D K +
Sbjct: 4 VPIVVEQTARGERSY---DIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG ++ LAIYDTMQ +K V T CVG A +A LLA G KG R A+P S I
Sbjct: 61 YLYINSPGGVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI A+ +L+++ + + LS +T
Sbjct: 121 MIHQPLGGARGQATDIAIHAEHILKLKKRLNEILSERT 158
>gi|33862948|ref|NP_894508.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460517|sp|Q7V7R2.1|CLPP3_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634865|emb|CAE20851.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 197
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++D + + L+ +T
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDRLNRVLADRT 156
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A +L+L + DD K + +YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + FLLA G KG R A+P S I + P G RGQA DI+
Sbjct: 79 DTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEIMIHQPLGGVRGQAADIKI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
AD +LR +D I + LS +T
Sbjct: 139 HADWILRTKDKINRILSERT 158
>gi|124023248|ref|YP_001017555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963534|gb|ABM78290.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9303]
Length = 197
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DIR +ADE+L ++D + + L+ +T
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDRLNRVLADRT 156
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D+ SN I+A +L+L++ D K +++
Sbjct: 3 PTVIEQS-GRGERAF-DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ V T CVG A + FLL GG KG R ++P +RI +
Sbjct: 61 YINSPGGSVTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 121 HQPLGGAQGQATDIEIQAKEIL 142
>gi|148223587|ref|NP_001088816.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Xenopus laevis]
gi|76779451|gb|AAI06237.1| LOC496087 protein [Xenopus laevis]
Length = 247
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Query: 42 EFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTP--KVLYRTPGEGSWQWVDLWNALYRERV 99
E + R + L GIR +R PI +P ++ G G + D+++ L RER+
Sbjct: 2 ELFVRGTRPLLKGIRALTQLRNVHCSPPILSPLIPIVVEQTGRGERAY-DIYSRLLRERI 60
Query: 100 IFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVG 159
I + ID+ S+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ + +P+
Sbjct: 61 ICVMGPIDDSLSSVVVAQLLFLQSESNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPIC 120
Query: 160 THCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDY 219
T CVG A + LLA G G R ++P SRI + P+G ARGQA DI +A+E+L+++
Sbjct: 121 TWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQ 180
Query: 220 IFKELSRKT 228
I + ++ T
Sbjct: 181 INEIYAKHT 189
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L+S D K +
Sbjct: 13 VPIVIEQTPRGERAY---DIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTM+ +K V T C+G A + FLL+ G KG R A+P SRI
Sbjct: 70 YMYINSPGGVVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRI 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++ Y+ + L+ T
Sbjct: 130 MIHQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHT 167
>gi|77553345|gb|ABA96141.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
Length = 216
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEVTWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A + F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMVSFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI L PA A R + + E +EL +V + I + + +T
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVHEMITRVYALRT 162
>gi|325662430|ref|ZP_08151036.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331086220|ref|ZP_08335302.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471264|gb|EGC74488.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330406379|gb|EGG85893.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 193
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIKCDVSTTCIGMAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI+ AD +L+ R + K L+ T
Sbjct: 121 MIHQPSGGAQGQATDIKIVADHILKTRTKLNKILAENT 158
>gi|113953920|ref|YP_730624.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113881271|gb|ABI46229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 196
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +++Y+
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFLYV 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A GQA DIR +ADE+L ++D + EL+ +T
Sbjct: 123 PLGGASGQASDIRIQADEILFLKDRLNHELADRT 156
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 95/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IFIG ID+ ++ ++A L+L++ D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T C+G A + FLLA G KG R A+P++RI + P G +GQA DI
Sbjct: 80 DTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQPLGGVQGQATDIDI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
A E+LR++D + ++L+ T
Sbjct: 140 HAKEILRMKDLLNEKLAYHT 159
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G ++ D+++ L ++R+IF+G I ++++N I+A +L+LD+ + + +Y+
Sbjct: 5 PTVIEQT-GRGEMRY-DVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG V+ LAIYDTMQ +K+ V T C+G A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YLNSPGGYVSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVR 217
P G A GQA DI +A E+L+++
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLK 147
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 73 PKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG+KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+ I++ +N I+A +L+L+S D K V
Sbjct: 4 VPIVVEQTSKGERSY---DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDV 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAIYDTMQ ++ V T CVG A +A LLA G KG R A+P SR+
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI A E+LR+R+ + + L+ T
Sbjct: 121 MIHQPLGGAQGQATDIEIHAREILRIREEMNQILASHT 158
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 105/165 (63%), Gaps = 6/165 (3%)
Query: 64 RIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
R++ +PI + + GE S+ D+++ L ++R+IF+ I++ +N I+A +L+L+S
Sbjct: 3 RVSYVPIVVEQT---SKGERSY---DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLES 56
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
D K +++YIN PGG V+ LAIYDTMQ ++ V T CVG A +A LLA G KG R
Sbjct: 57 EDPDKDIHLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRF 116
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
A+P SR+ + P G A+GQA DI A E+LRVR+ + + L+ T
Sbjct: 117 ALPHSRVMIHQPLGGAQGQATDIEIHAREILRVREEMNQILAAHT 161
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
Query: 73 PKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L+S D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A E+L++++ + + ++ +
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRRMAEHS 158
>gi|392283522|gb|AFM54242.1| ClpP (chloroplast) [Ceratozamia hildae]
Length = 195
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 8/162 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEED-------NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 53
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 54 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 113
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R + PA + GQA + EA+E+L++RD I ++T
Sbjct: 114 ARAMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 155
>gi|392283524|gb|AFM54243.1| ClpP (chloroplast) [Zamia furfuracea]
Length = 195
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 8/162 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEED-------NRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 53
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 54 KDIYLYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 113
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R + PA + GQA + EA+E+L++RD I ++T
Sbjct: 114 ARAMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 155
>gi|159903385|ref|YP_001550729.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159888561|gb|ABX08775.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9211]
Length = 196
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VIEESGRGERAF-DIYSRLLRERIIFLGEPVTNDSANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG V L I+DT++ +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIFLYINSPGGSVYDGLGIFDTIEHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLK 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L ++D + EL+ +T
Sbjct: 115 HSRIMIHQPLGGARGQASDIRIQADEILFLKDRLNNELAERT 156
>gi|388497952|gb|AFK37042.1| unknown [Lotus japonicus]
Length = 124
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 83/119 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDK 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFP 119
>gi|309322383|ref|YP_003934463.1| ATP-dependent Clp protease proteolytic subunit [Cathaya
argyrophylla]
gi|307683309|dbj|BAJ19616.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Cathaya argyrophylla]
Length = 196
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ+ M+YL + D
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINPEIANQVTGLMVYLSAEDAD 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V + ++D MQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIFSFLNCPGGSVISGVGLFDIMQVIVPDVHTICMGVAASMGSFVLIGGEISKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+RI + P+ + G A + NE + +RDYI K +T G
Sbjct: 121 ARIMIHQPSSSYYDGPAAEFLNEVKHVTMLRDYITKCYIERTGKSG 166
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T C+G A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++D + + L+ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDQLNELLAEHT 157
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
alaskensis G20]
Length = 200
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPI P V+ T G + D+++ L ++R+I +G +D+ ++ I A +L+L+S +
Sbjct: 1 MPI--PMVIEST-GRAERAY-DIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPE 56
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ + +PV T C+G A + FLLA G+ G R A+P
Sbjct: 57 KEIYLYINSPGGVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPN 116
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI +A E+LR++D + + LSR T
Sbjct: 117 SRIMIHQPMGGAQGQATDIDIQAREILRLKDRLNEILSRHT 157
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IFIG ID+E +N I+A L+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPE 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +AIYDTMQ +K V T C+G A + LL G KG R A+P
Sbjct: 58 KDISFYINSPGGVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +GQA DI+ +A+E+LR++D + + LS T
Sbjct: 118 SRIMIHQPLGGTQGQATDIKIQANEILRMKDILNEILSTHT 158
>gi|150251498|ref|YP_001312231.1| ATP-dependent Clp protease proteolytic subunit [Cycas taitungensis]
gi|452848951|ref|YP_007474629.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Cycas
revoluta]
gi|160380551|sp|A6H5K6.1|CLPP_CYCTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149941548|dbj|BAF64972.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Cycas
taitungensis]
gi|372863106|gb|AEX99179.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Cycas
revoluta]
Length = 195
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 8/162 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEED-------NRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 53
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 54 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 113
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I ++T
Sbjct: 114 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 155
>gi|189162296|ref|YP_001936542.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
gi|166065382|gb|ABY79757.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
Length = 210
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD++N LYR R++F+ Q I E SN ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRLPGDEDATWVDVYNRLYRSRLLFLTQEITTEISNYLIGLMVYLSIEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ Y++IN PGG V P +AI+D MQ + + T C+G A + F+L GGE R A P
Sbjct: 61 QDFYLFINCPGGWVLPGIAIFDAMQLVLPDIYTICMGIAASMGSFILVGGEITKRFAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + G + EA+ELL +R+ + K +++T
Sbjct: 121 ARVMIHQPASSFHEGSTGECMMEAEELLTLRETLTKVYAQRT 162
>gi|456063263|ref|YP_007502233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
gi|455440560|gb|AGG33498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
Length = 209
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKE 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GEKG R A+P SR
Sbjct: 75 ISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +R+ + K L+ +T
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRT 173
>gi|284929120|ref|YP_003421642.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809579|gb|ADB95284.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 214
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ +N I+A +LYLDS D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIIFLGTPVDDQMANSIVAQLLYLDSEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM+ ++ + T C G A + FLL+GG KG R A+P SRI + P G A+GQA DI
Sbjct: 102 DTMKQIRPDIVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIAI 161
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++ + LS T
Sbjct: 162 QAQEILYIKKRLNNMLSEHT 181
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G A+GQA DI +A E+L R+ DY+
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYL 152
>gi|295136934|ref|YP_003587767.1| ATP-dependent Clp protease proteolytic subunit [Lathyrus sativus]
gi|293338656|gb|ADE43628.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Lathyrus sativus]
Length = 211
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV ++ PGE WVDL++ L+ R++F+G I+ E +NQ+ M+YL + +
Sbjct: 1 MPVGVPKVAFQIPGEDEATWVDLYHQLFYSRLLFLGDEIESELANQVAGMMIYLSLENKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG+V +AI+DTMQ +++ V T C+G A +A +LAGG R A P
Sbjct: 61 KDLYLFINSPGGEVMSGMAIFDTMQVVEAQVHTICMGLAASMASLILAGGGITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + P A G + + EADE++ +R+ I S++T
Sbjct: 121 ARVMIHQPHSAPYEGPSGECMLEADEMVILRETITAIYSQRT 162
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L ++R+IF+ +++ +N I+A +L+LD+ D+ K + MYI
Sbjct: 24 VVIENDGRGERSY-DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYI 82
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG +T LAIYDTM+ +KS V T CVG A + LLA G KG R ++P SRI +
Sbjct: 83 NSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPNSRIMIHQ 142
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G ARGQA DI+ +A E+ R+++ K LS T
Sbjct: 143 PLGGARGQATDIQIQAKEIERMKEITSKILSEAT 176
>gi|148242503|ref|YP_001227660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850813|emb|CAK28307.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 196
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFMGEPVTAESANRIVAQLLFLEAEDPDKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLLA G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLAAGAPGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DIR +ADE+L ++ + +EL+++T
Sbjct: 123 PLGGAQGQASDIRIQADEILFLKKRLNEELAQRT 156
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE ++ D+++ L ++R+IF+G ID++ +N ++A +L+L + D
Sbjct: 1 MPL-IPTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P
Sbjct: 57 EKDISLYINSPGGSITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
S + + P G +GQA DI A +L++RD + K L+ +T
Sbjct: 117 NSEVMIHQPLGGTQGQASDIEIHAKRILKMRDRLNKILAERT 158
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 90/140 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER+IF+G +DE +N I A ML+LD+ D K + +YIN PGG VT +AIY
Sbjct: 44 DLYSRLLRERIIFLGTQVDENLANTITAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 103
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R ++P SRI + P G A+GQA DI
Sbjct: 104 DTMQQVRPDVVTICYGLAASMGAFLLSGGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 163
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L + + + L+ T
Sbjct: 164 QAKEILYHKRKLNELLAEHT 183
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
G G + D+++ L ++R+IF+G ID+E +N I+A +L+L+S D K ++ Y+N PGG
Sbjct: 12 GRGERAY-DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGH 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
++ +AIYDTM+ +K PV T CVG A + LLA GE+G RSA+P SRI + P G +
Sbjct: 71 ISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGFQ 130
Query: 201 GQADDIRNEADELLRVRD 218
GQA DI +A E+LR++D
Sbjct: 131 GQATDIDIQAREILRLKD 148
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ I+A +LYL++ D K +Y+YIN PGG V +AIY
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPGGSVYAGMAIY 107
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C G A + FLL+GG KG R +P SRI + P G A+GQA DI
Sbjct: 108 DTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 167
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L +++ + + L+ T
Sbjct: 168 QAKEILYIKNKLNQLLADHT 187
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
Length = 202
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + IYDTM ++ V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIYDTMNQIRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
P G A+GQA DI +A E+L + + + L+ TD
Sbjct: 121 HQPLGGAQGQASDIEIQAKEILYHKQRLNQLLAEHTD 157
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++D + L+ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHT 157
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 198
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+G ID+ SN ++A +L+L++ D K +++
Sbjct: 3 PTVIEQS-GRGDRAF-DIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFI 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ V T CVG A + FLLAGG KG R ++P +RI +
Sbjct: 61 YINSPGGSVTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLAGGTKGKRLSLPHTRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 121 HQPLGGAQGQATDIEIQAKEIL 142
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YI
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPERDIYIYI 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A GQ DI +A E+ ++R + + L+R T
Sbjct: 150 PSGGAHGQETDIIIQAREIEKIRKLLDELLARHT 183
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 100/151 (66%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K+PV T CVG A + LL G KG R ++P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G ARGQA DI +A E+LR++
Sbjct: 119 SSRIMIHQPLGGARGQATDIEIQAREILRMK 149
>gi|33240370|ref|NP_875312.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460522|sp|Q7VC22.1|CLPP1_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33237897|gb|AAP99964.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 196
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VVEETGRGERAF-DIYSRLLRERIVFLGEQVTNDSANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG V I+DT+Q +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIFLYINSPGGSVYDGFGIFDTIQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DIR +ADE+L ++ + ELS +T
Sbjct: 115 HSRIMIHQPLGGARGQATDIRIQADEILFLKQKLNTELSNRT 156
>gi|219673992|ref|YP_002456477.1| clp protease proteolytic subunit [Trifolium subterraneum]
gi|193788961|gb|ACF20557.1| clp protease proteolytic subunit [Trifolium subterraneum]
Length = 199
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV Y P E WVDL++ LY ER++F+GQ ++ E SNQ+ M+YL D +
Sbjct: 1 MPVGVPKVPYLMPEEDEASWVDLYHLLYEERLLFLGQEVNSEISNQLNGLMVYLSLQDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG++ +A++DTMQ +K+ V T CVG A +A LL GGE R A
Sbjct: 61 KDLYLFINSPGGELMSGMAMFDTMQFVKAEVQTVCVGIAVSMASLLLLGGEITKRLAFSH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRV 216
+R+ + PA + + EADELL++
Sbjct: 121 ARVMMHEPASVFEDDKTGECMLEADELLKM 150
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++D + L+ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHT 157
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID +N I+A ML+LD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G A+GQA DI +A E+L R+ D++
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDFL 152
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 100/150 (66%), Gaps = 3/150 (2%)
Query: 79 TPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG 138
+ GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PG
Sbjct: 6 SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG 62
Query: 139 GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA 198
G VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+ + P G
Sbjct: 63 GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGG 122
Query: 199 ARGQADDIRNEADELLRVRDYIFKELSRKT 228
ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 123 ARGQATDIQIQAQEILKLKEMLTRKMAEHS 152
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +LYLD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G A+GQA DI +A E+L R+ DY+
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYL 152
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 104/157 (66%), Gaps = 4/157 (2%)
Query: 73 PKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L +ER+IF+G ID+ +N I+A ML+L+S D K +++YI
Sbjct: 1 MVVENSGRGERAY-DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYI 59
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTMQ +K V T CVG A + LL G KG R A+P +RI +
Sbjct: 60 NSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 119
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQ+ DI+ +A E+LR+R+ + L+R T
Sbjct: 120 PLGGAQGQSTDIQIQAKEILRLREVGNEILARHT 153
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 96/140 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LA+Y
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPGGVVTAGLAMY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G G R A+P +RI + P+G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQPSGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ + L++ T
Sbjct: 140 QAKEILRLRETANEILAKHT 159
>gi|374411910|gb|AEZ48939.1| clp protease proteolytic subunit, partial [Renealmia alpinia]
Length = 195
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WV+L N LYRER++F+GQ + EE SN I+ M+YL D +
Sbjct: 1 MPVGVPKVPFRNPGEEDATWVEL-NRLYRERLLFLGQEVKEEISNTIVGLMVYLSIEDQT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN GG V +AI+DTMQ + V T C+G A +A F+L GGE R A P
Sbjct: 60 RDLYLFINSLGGWVISGIAIFDTMQFVTPDVHTICMGIAASMASFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + PA + G++ D E +++++R+ + K ++T
Sbjct: 120 ARIMIHQPASSFYDGRSGDFFRETRQIVKLRETLTKVYVQRT 161
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M + +P V+ G G + D+++ L ++R+IF+ +++ +N I+A +L+LD+ D+
Sbjct: 13 MSVYSP-VVIENDGRGERSY-DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNE 70
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG +T LAIYDTM+ +KS V T CVG A + LL+ G KG R ++P
Sbjct: 71 KDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPN 130
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G ARGQA DI+ +A E+ R+++ K LS T
Sbjct: 131 SRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEAT 171
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKD 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GEKG R A+P SR
Sbjct: 75 ISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +R+ + K L+ +T
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRT 173
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 192
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K V
Sbjct: 4 VPIVVEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDV 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AI DTMQ ++ V T CVG A +A LLA G KG R A+P S I
Sbjct: 61 SLYINSPGGSVTAGMAILDTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ AD +LRVR+ + + LS +T
Sbjct: 121 MIHQPLGGVQGQAVDIKIHADRILRVREKLNRILSERT 158
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+Y+
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYV 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A+GQ DI +A E+ ++R + + L++ T
Sbjct: 150 PSGGAQGQESDIVIQAREIEKIRTLLEELLAKHT 183
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A ML+L++ D K +
Sbjct: 5 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+ YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G KG R A+P +RI
Sbjct: 62 HFYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L P G +GQA +I A E+LR++D + + L++ T
Sbjct: 122 MLHQPLGGVQGQATEIEIHAREILRIKDILNELLAKHT 159
>gi|242279532|ref|YP_002991661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
gi|242122426|gb|ACS80122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
Length = 202
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 104/174 (59%), Gaps = 12/174 (6%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GT ++ T G + D+++ L ++R+I + +++ ++ I A +L+L+S D K +
Sbjct: 3 GTIPIVVETTGRTERAY-DIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKEI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ + +PV T C+G A + FLL+ GEKG R ++P SRI
Sbjct: 62 YMYINSPGGVVTAGMAIYDTMQYISAPVATLCMGQAASMGAFLLSAGEKGQRYSLPHSRI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ P G A+GQA DI +A E+LR+R + +E+ + TD + F
Sbjct: 122 LIHQPLGGAQGQATDIDIQAREILRLRKSLNSIMAENTGRTVEEIEKDTDRDNF 175
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L +ER+IF+G ID+ +N I+A ML+L+S D K +++YI
Sbjct: 7 MVVETSGRGERAY-DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYI 65
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTMQ +K V T CVG A + LL G KG R A+P +RI +
Sbjct: 66 NSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 125
Query: 195 PAGAARGQADDIRNEADELLRVRD 218
P G A+GQ+ DI+ +A E+LR+R+
Sbjct: 126 PLGGAQGQSTDIQIQAKEILRLRE 149
>gi|333370325|ref|ZP_08462336.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332978057|gb|EGK14795.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 201
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ DL++ L ++R+IFIG ID+ +N ++A ML+L + D K +
Sbjct: 12 VPMVVEQTSRGERAY---DLYSRLLKDRIIFIGSPIDDSVANSVMAQMLFLAADDPDKEI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S +
Sbjct: 69 SLYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGTKGKRYALPNSEV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A+ +L+ R I++ L+ +T
Sbjct: 129 MIHQPLGGVRGQAADIQIHAEWILKTRKRIYEILAGRT 166
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR++
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMK 149
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YI
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYI 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ + T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A+GQ DI +A E+ ++R + + L++ T
Sbjct: 150 PSGGAQGQETDIVIQAREIEKIRRLLEELLAKHT 183
>gi|389576431|ref|ZP_10166459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
gi|389311916|gb|EIM56849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
Length = 193
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ P V+ +T G G + D+++ L ++R+IF+G+ +++ +N ++A +L+L+S D S
Sbjct: 1 MPL-IPYVIEQT-GRGERSY-DIYSRLLKDRIIFLGEEVNDVSANLVVAQLLFLESEDPS 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P
Sbjct: 58 KDIHLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGLAASMGAFLLAGGTKGKRLALPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
+ I + P+G A+G+A DI A+++L+++ + L+ T YE K
Sbjct: 118 AEIMIHQPSGGAQGKASDIEIVAEQILKIKKRMNTILAENTGQTYEKVK 166
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR++
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMK 149
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A +L+LD+ D K +++YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A + FLLA G KG R A+P S + + P G A GQA DI
Sbjct: 79 DTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGAEGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A +L++R+ + K L+ +T
Sbjct: 139 RARRILKMRENLNKILAERT 158
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K +
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG V+ LAIYDTMQ +K V T CVG A +A LLA G KG R A+P S +
Sbjct: 62 MYINSPGGSVSAGLAIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI A +L+ R+ + + L+ +T
Sbjct: 122 IHQPLGGARGQASDIEIHARHILKTRERLNRILAERT 158
>gi|262037349|ref|ZP_06010814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
gi|261748606|gb|EEY35980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
Length = 189
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L ++R+IF+G +++ +N I+A +L+LD+ D K + MYI
Sbjct: 5 VVIENDGRGERSY-DIYSRLLKDRIIFLGGEVEDNIANSIIAQLLFLDAQDKEKDIVMYI 63
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTM+ +K+ V T C+G A + LLA G KG R ++P SR+ +
Sbjct: 64 NSPGGVVTAGLAIYDTMRHIKADVSTVCIGQAASMGAVLLASGAKGKRYSLPNSRVMIHQ 123
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G ARGQA DI+ +A E+ +++ + + LS T
Sbjct: 124 PSGGARGQATDIQIQAKEIEKIKKTLNEILSEAT 157
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 209 EADELLRVRDYIFKELSRKT 228
ELLR++D + + LS+ T
Sbjct: 146 ITRELLRIKDLLNRILSKHT 165
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPI P V+ +T GE S+ D+++ L ++R++ +G ID++ SN I++ +L+L+S D
Sbjct: 4 MPI--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T C+G A + LL G KG R ++P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR+R
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMR 149
>gi|157803694|ref|YP_001492243.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
gi|379022874|ref|YP_005299535.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. CA410]
gi|166214705|sp|A8EYM5.1|CLPP_RICCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157784957|gb|ABV73458.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
gi|376323812|gb|AFB21053.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. CA410]
Length = 201
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + FLL GGEKG R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G +GQA DI A E L+++ + + S+ T
Sbjct: 121 MIHQPSGGYQGQATDIEIHAQETLKIKRLLNELYSKHT 158
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID++ SN ++A +L+L+S D K ++
Sbjct: 4 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K+PV T CVG A + LLA G +G R +P SRI
Sbjct: 62 LYINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRD 218
+ P G +GQA DI A E+LR+R+
Sbjct: 122 IHQPLGGFQGQASDISIHAQEILRLRE 148
>gi|408372151|ref|ZP_11169898.1| ATP-dependent Clp protease proteolytic subunit [Galbibacter sp.
ck-I2-15]
gi|407742416|gb|EKF54016.1| ATP-dependent Clp protease proteolytic subunit [Galbibacter sp.
ck-I2-15]
Length = 224
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 66 AMMPIG-TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
AM P+G TP ++ + + +D+++ L +R+IF+G I+++ +N I A +L+L+S
Sbjct: 28 AMTPVGLTPNIIEER--QMNAVAMDVFSRLMMDRIIFMGTAINDQVANIIQAQLLFLEST 85
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D SK + +YIN PGG V L IYDTMQ +K V T C G A + LL GEKG RSA
Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAGEKGKRSA 145
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SR+ + P G A+GQA DI A E+L+++D +++ +S +
Sbjct: 146 LPHSRVMIHQPLGGAQGQASDIEITAREILKLKDELYQIISNHS 189
>gi|357000595|gb|AET48457.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
glabra]
Length = 196
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSXXPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
+R+ + PA + G A D NE+ + +RDYI K +T + G
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPG 166
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 238
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ ++A +LYL++ D K +Y+YIN PGG V +AIY
Sbjct: 47 DVYSRLLRERIIFLGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPGGSVYSGMAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG KG R +P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIEPDVSTICYGIAASMGAFLLAGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 166
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++ + + L+ T
Sbjct: 167 QAKEILYIKQRLNEILTHHT 186
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G KG R A+P +RI
Sbjct: 62 HLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR+R+ + + LS T
Sbjct: 122 MIHQPLGGVQGQATDIDIHAREILRMREILNERLSHHT 159
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+ P V+ T G + D+++ L ++R+I +G ID+ ++ I A +L+L+S D K
Sbjct: 2 VAIPMVI-ETTGRTERAY-DIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKE 59
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+YMYIN PGG V+ +AIYDTMQ + +PV T C+G A + LL GE G R A+P SR
Sbjct: 60 IYMYINSPGGSVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMRYALPHSR 119
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRD 218
I + P G A+GQA DI A E+LR+RD
Sbjct: 120 IMIHQPLGGAQGQASDIHIHAKEILRLRD 148
>gi|428780533|ref|YP_007172319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428694812|gb|AFZ50962.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 217
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER++F+GQ +D++ ++ I A ML+L++ D K + +YIN PGG V +AIY
Sbjct: 36 DLYSRLLRERIVFLGQQVDDQIADSIAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIY 95
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG +G R ++P SRI + P G A+GQA DI
Sbjct: 96 DTMQQIQPDVATICYGIAASMGAFLLAGGAEGKRMSLPNSRIMIHQPLGGAQGQAADIEI 155
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L +++ + + L+ T
Sbjct: 156 QAREILYIKNTLNELLAHHT 175
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 209 EADELLRVRDYIFKELSRKT 228
ELLR++D + + LS+ T
Sbjct: 146 ITRELLRIKDLLNRILSKHT 165
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPI P V+ +T GE S+ D+++ L ++R++ +G ID++ SN I++ +L+L+S D
Sbjct: 1 MPI--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDP 55
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T C+G A + LL G KG R ++P
Sbjct: 56 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLP 115
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR+R
Sbjct: 116 SSRIMIHQPLGGVRGQATDIEIQAKEILRMR 146
>gi|427417857|ref|ZP_18908040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760570|gb|EKV01423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 200
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L RER++F+G +D+ ++ I+A +LYLDS D K V +YI
Sbjct: 4 VVLEQSGRGERAF-DIYSRLLRERIVFLGSGVDDTLADSIVAQLLYLDSEDPEKDVQIYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG +T +AIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 63 NSPGGSITAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 123 PLGGAQGQAVDIEIQAREILYLKQRLNELLAGHT 156
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IF+G +D+E +N I+A +L+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPE 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +A+YDTMQ +K V T C+G A + LLA G KG R ++P
Sbjct: 58 KDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G A+GQA DI+ +A+E+LR+++ + LS+ T
Sbjct: 118 SRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHT 158
>gi|67459164|ref|YP_246788.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
gi|75536404|sp|Q4ULF0.1|CLPP_RICFE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67004697|gb|AAY61623.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
Length = 201
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N ++A +L+L++ + K +
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G RGQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYRGQATDIEIHAQETLKIKRLLNELYSKHTGQE 161
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IFIG I++ +N I+A +L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERSY---DIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K PV T C+G A + FLLA G G R A+P +RI
Sbjct: 62 HLYINSPGGVVTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G +GQA DI A E+LR+++ + K LS+ T
Sbjct: 122 MIHQPSGGMQGQATDIGIHAKEILRMKEILNKLLSKHT 159
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE +W D+++ L ++R++F+G ++++ +N I A +LYL+S D K + +YIN PGG
Sbjct: 21 GERTW---DIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDAEKEIMLYINSPGGS 77
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ ++ PV T CVG A + LLA G G R ++P SRI + P+ A R
Sbjct: 78 VTAGMAIYDTMQHIRCPVATVCVGQAASMGALLLAAGSAGLRRSLPNSRIMIHQPSSAFR 137
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI A E+L R + L+ T
Sbjct: 138 GQASDIEIHAKEILHTRQRTNEILAHHT 165
>gi|15892669|ref|NP_360383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
gi|15619841|gb|AAL03284.1| ATP-dependent clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
Length = 216
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 34 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 93
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 94 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 153
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 154 HAQETLKIKRLLNELYSKHTEQE 176
>gi|165933331|ref|YP_001650120.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Iowa]
gi|165908418|gb|ABY72714.1| ATP-dependent endopeptidase clp proteolytic subunit [Rickettsia
rickettsii str. Iowa]
Length = 216
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 34 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 93
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 94 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 153
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 154 HAQETLKIKRLLNELYSKHTEQE 176
>gi|229586800|ref|YP_002845301.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
gi|228021850|gb|ACP53558.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
Length = 216
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 34 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 93
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 94 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 153
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 154 HAQETLKIKRLLNELYSKHTEQE 176
>gi|406872664|gb|EKD23092.1| hypothetical protein ACD_83C00060G0001 [uncultured bacterium]
Length = 201
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 15/173 (8%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P VL ++ GE ++ D+++ L ++R+IFIG ID+E +N I+A +L+L S D SK +
Sbjct: 8 PTVLEKSQYGERAY---DIYSRLLKDRIIFIGDVIDDEIANLIIAQLLFLASEDSSKDIQ 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAI+DTM +K V T C+G A + FLLA G+KG R A+P S++
Sbjct: 65 LYINSPGGSVSAGLAIFDTMNYVKPDVSTMCIGMAASMGAFLLAAGKKGKRLALPNSKVL 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ GQA DI+ A+E L+VRD + K++ R TD + F
Sbjct: 125 IHQVMSGFEGQAADIKIHAEETLKVRDQLNQILAERTGKSIKDIERDTDRDNF 177
>gi|379018956|ref|YP_005295190.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hlp#2]
gi|379712470|ref|YP_005300809.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia philipii
str. 364D]
gi|376329115|gb|AFB26352.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia philipii
str. 364D]
gi|376331536|gb|AFB28770.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hlp#2]
Length = 201
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 139 HAQETLKIKRLLNELYSKHTEQE 161
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L RER++FIG ID+ +N ++A +L+L++ D + +
Sbjct: 3 VPIVIEQTARGERAY---DIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K + T C+G A +A LLAGG KG R A+P SRI
Sbjct: 60 TLYINSPGGIVTSGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRYALPHSRI 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L P G+ +GQA D+ +A E+LR+R + + L+ T
Sbjct: 120 MLHQPIGSFQGQATDVDIQAREILRLRAMLNEILANHT 157
>gi|157828616|ref|YP_001494858.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|378721430|ref|YP_005286317.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Colombia]
gi|378722779|ref|YP_005287665.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Arizona]
gi|378724135|ref|YP_005289019.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hauke]
gi|379016310|ref|YP_005292545.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Brazil]
gi|379017921|ref|YP_005294156.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hino]
gi|166214706|sp|A8GSH5.1|CLPP_RICRS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157801097|gb|ABV76350.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|376324834|gb|AFB22074.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Brazil]
gi|376326454|gb|AFB23693.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Colombia]
gi|376327803|gb|AFB25041.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Arizona]
gi|376330487|gb|AFB27723.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hino]
gi|376333150|gb|AFB30383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hauke]
Length = 201
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 139 HAQETLKIKRLLNELYSKHTEQE 161
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L ++D + L+ T
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHT 181
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+ G KG R A+P +RI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ +A+E+LR++ + + ++ +
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHS 158
>gi|34581620|ref|ZP_00143100.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
gi|341583923|ref|YP_004764414.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
heilongjiangensis 054]
gi|350273581|ref|YP_004884894.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia japonica
YH]
gi|374319373|ref|YP_005065872.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
13-B]
gi|383751354|ref|YP_005426455.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
str. D-CWPP]
gi|20137864|sp|Q92HM5.2|CLPP_RICCN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28263005|gb|EAA26509.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
gi|340808149|gb|AEK74737.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
heilongjiangensis 054]
gi|348592794|dbj|BAK96755.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia japonica
YH]
gi|360041922|gb|AEV92304.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
13-B]
gi|379774368|gb|AFD19724.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
str. D-CWPP]
Length = 201
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 139 HAQETLKIKRLLNELYSKHTEQE 161
>gi|238650581|ref|YP_002916433.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
gi|259585964|sp|C4K1D4.1|CLPP_RICPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238624679|gb|ACR47385.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
Length = 201
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 139 HAQETLKIKRLLNELYSKHTEQE 161
>gi|383484037|ref|YP_005392950.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia parkeri
str. Portsmouth]
gi|378936391|gb|AFC74891.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia parkeri
str. Portsmouth]
Length = 201
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +YMYIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T+ E
Sbjct: 139 HAQETLKIKRLLNELYSKHTEQE 161
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L ++D + L+ T
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHT 181
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
Query: 73 PKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ ++++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI A E+L++++ + ++++ +
Sbjct: 122 IHQPLGGARGQATDIEIHAREILKLKEMLTRKMAEHS 158
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
Query: 72 TPKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V Y G + + D++ L ER++F+G ID+E SN ++A +L+L+S D K +
Sbjct: 6 APFVPYVVEDRGRGERIFDIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T LAIYDTMQ +K + T C+G A + LLAGG KG R A+P SR+
Sbjct: 66 NLYINSPGGSITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRFALPNSRV 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A G A DI A E+L +RD + K L++ T
Sbjct: 126 MIHQPFGGAEGVAKDIEIRAREILYLRDELNKILAKHT 163
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IF+G ID+E +N I+A ML+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPD 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +AIYDT+Q +K V T C+G A + LL G G R A+P
Sbjct: 58 KDINFYINSPGGVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G A+GQA DI+ +A E+LR++D + + LS+ T
Sbjct: 118 ARIMIHQPMGGAQGQATDIKIQATEILRMKDVLNEILSKHT 158
>gi|171463607|ref|YP_001797720.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193145|gb|ACB44106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 209
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERVIF+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVIFLVGEVNDQTANLVIAQLLFLESENPDKE 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GE G R A+P SR
Sbjct: 75 ISLYINSPGGAVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGENGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +R+ + K L+ +T
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRT 173
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
G G + D+++ L ++R++ +G ID+ +N I A +L+L+S + K++YMYIN PGG
Sbjct: 13 GRGERMY-DIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINSPGGA 71
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ + +PV T C+G A +A LLA GEKG R +P SRI + P G +
Sbjct: 72 VTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQPMGGFQ 131
Query: 201 GQADDIRNEADELLRVR 217
GQA DI +A E++R+R
Sbjct: 132 GQATDIAIQAKEIIRLR 148
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELL----RVRDYI 220
+ P G A+GQA DI +A E+L R+ DY+
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKKRLNDYL 153
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IFIGQ I++ +N I+A +L+L+S + + +
Sbjct: 14 VPIVVEQTSRGERSY---DIYSRLLKDRIIFIGQQIEDHMANLIIAQLLFLESDEPDQDI 70
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG V+ LAIYDTMQ +K V T C+G A + LL G KG R A+P SR+
Sbjct: 71 YLYINSPGGHVSSGLAIYDTMQYIKPDVQTICIGQAASMGALLLTAGTKGKRFALPNSRV 130
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G +GQ+ DI+ A+E+L+VRD + L++ +
Sbjct: 131 MIHQPSGGFQGQSTDIQIHAEEILKVRDTLDDILAKHS 168
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N ++A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR A+ +L+ + + + LS +T
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWILKTKRQLNQILSERT 157
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G I++ ++ ++A ML+L++ D K +++YIN PGG +T LAIY
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIY 81
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+
Sbjct: 82 DTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKI 141
Query: 209 EADELLRVRDYIFKELSRKT 228
A+ LLR+RD + + LS T
Sbjct: 142 HAERLLRLRDKLERILSENT 161
>gi|383482277|ref|YP_005391191.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
montanensis str. OSU 85-930]
gi|378934631|gb|AFC73132.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
montanensis str. OSU 85-930]
Length = 201
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 4 VPIVIESTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAANPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQE 161
>gi|126173838|ref|YP_001049987.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS155]
gi|153000122|ref|YP_001365803.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS185]
gi|160874744|ref|YP_001554060.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS195]
gi|217973910|ref|YP_002358661.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS223]
gi|373948994|ref|ZP_09608955.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
gi|378707997|ref|YP_005272891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|386325167|ref|YP_006021284.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|386340598|ref|YP_006036964.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|418023625|ref|ZP_12662610.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|166214708|sp|A3D305.1|CLPP_SHEB5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214709|sp|A6WLQ1.1|CLPP_SHEB8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082464|sp|A9KWH7.1|CLPP_SHEB9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763799|sp|B8E5E9.1|CLPP_SHEB2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125997043|gb|ABN61118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
baltica OS155]
gi|151364740|gb|ABS07740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS185]
gi|160860266|gb|ABX48800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS195]
gi|217499045|gb|ACK47238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS223]
gi|315266986|gb|ADT93839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|333819312|gb|AEG11978.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|334862999|gb|AEH13470.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|353537508|gb|EHC07065.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|373885594|gb|EHQ14486.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
Length = 202
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSY---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRHCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHT 166
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIY TM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYATMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHS 158
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID +N I+A +LYLD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRKLNEHLAEHT 156
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G I++ ++ ++A ML+L++ D K +++YIN PGG +T LAIY
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+
Sbjct: 79 DTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A+ LLR+RD + + LS T
Sbjct: 139 HAERLLRLRDKLERILSENT 158
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 49 KSLYSGIRNDKPIRGRIAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQN 105
++L++G R + I MP+ P VL G+G + D+++ L RER+IF+G
Sbjct: 16 QNLWAGPRPEATIG-----MPMAAPGVLPTVVEQSGKGERAF-DIYSRLLRERIIFLGTG 69
Query: 106 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 165
ID+ ++ ++A +L+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G
Sbjct: 70 IDDAVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGL 129
Query: 166 AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 225
A + FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L ++D + ++
Sbjct: 130 AASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMA 189
Query: 226 RKT 228
T
Sbjct: 190 EHT 192
>gi|444431697|ref|ZP_21226861.1| ATP-dependent Clp protease proteolytic subunit [Gordonia soli NBRC
108243]
gi|443887537|dbj|GAC68582.1| ATP-dependent Clp protease proteolytic subunit [Gordonia soli NBRC
108243]
Length = 201
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ R+P + +D+++ L ER++++G ID+ +N ++A +L+LDS + + + +
Sbjct: 7 PNVVTRSPA--GERVMDVYSRLLEERILYLGTEIDDGVANALIAQILHLDSDNPEQEIAL 64
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT A+YDT+Q +P+ T CVG A+ LLA GE+G R +P +R+ L
Sbjct: 65 YINSPGGSVTAAFALYDTLQYCNAPISTTCVGQAFSATALLLAAGERGRRFVLPHARVLL 124
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
P+G RG D+ ADE+LRVR I LSR T D E +
Sbjct: 125 HQPSGQGRGTIPDLILAADEILRVRSEIETALSRHTGQDVETLR 168
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ + L+R T
Sbjct: 140 QAKEILRLREVGNEILARHT 159
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 95/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++FIG ID+ +N ++A +L+L+S D K +++YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G G R A+P +R+ + P G A+GQA DI+
Sbjct: 79 DTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGAQGQATDIQI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ + L+R T
Sbjct: 139 QAREILRLREILNDILARHT 158
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 209 EADELLRVRDYIFKELSRKT 228
ELLR++D + + LS+ T
Sbjct: 148 ITRELLRIKDLLNRILSKHT 167
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 94/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 14 DIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 74 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 133
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ + L+R T
Sbjct: 134 QAKEILRLREVGNEILARHT 153
>gi|56269518|gb|AAH87510.1| LOC496087 protein, partial [Xenopus laevis]
Length = 243
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 49 KSLYSGIRNDKPIRGRIAMMPIGTP--KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
+ L GIR +R PI +P ++ G G + D+++ L RER+I + I
Sbjct: 5 RPLLKGIRALTQLRNVHCSPPILSPLIPIVVEQTGRGERAY-DIYSRLLRERIICVMGPI 63
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
D+ S+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ + +P+ T CVG A
Sbjct: 64 DDSLSSVVVAQLLFLQSESNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQA 123
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ LLA G G R ++P SRI + P+G ARGQA DI +A+E+L+++ I + ++
Sbjct: 124 ASMGSLLLAAGSSGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAK 183
Query: 227 KT 228
T
Sbjct: 184 HT 185
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G +++ +N I+A ML+LD+ D +K +++YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAEDPTKDIHLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K+ V T CVG A + FLL G G R A+P S I + P G A GQA DI
Sbjct: 79 DTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYALPNSEIMIHQPLGGAEGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A +L++RD + + LS +T
Sbjct: 139 RARRILKMRDKLNRILSERT 158
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 93/142 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTDY 230
+A E+LR+R YI + + T +
Sbjct: 138 QAKEILRLRSYINGLIVKHTGH 159
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 93/142 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTDY 230
+A E+LR+R YI + + T +
Sbjct: 138 QAKEILRLRSYINGLIVKHTGH 159
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 123 PLGGAQGQATDIEIQAREIL 142
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 93/142 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTDY 230
+A E+LR+R YI + + T +
Sbjct: 138 QAKEILRLRSYINGLIVKHTGH 159
>gi|241116836|ref|XP_002401631.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|215493175|gb|EEC02816.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
Length = 205
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 8 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENPKKDI 64
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG +T LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI
Sbjct: 65 YMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 124
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 125 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQE 165
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R+I +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT +AIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINIYINSPGGSVTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR++
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMK 149
>gi|419718353|ref|ZP_14245675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
gi|383305484|gb|EIC96847.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
Length = 193
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 106/159 (66%), Gaps = 4/159 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A +A FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+ P+G A+GQA +IR A+++L+ R+ + K L+ T+
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTN 159
>gi|349699184|ref|ZP_08900813.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 211
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 105/161 (65%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ S + A +LYL+SV+ SK +
Sbjct: 15 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPSKEI 71
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++ PV T C+G A + LLAGGEKG R A+P SR+
Sbjct: 72 SFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRV 131
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I+KE + +T
Sbjct: 132 MVHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYKEHTGRT 172
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G A+GQA DI +A E+L R+ DY+
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKRRLNDYL 152
>gi|407802230|ref|ZP_11149072.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
gi|407023905|gb|EKE35650.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
Length = 215
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L+S + K +
Sbjct: 24 VPMVIEQTARGERSF---DIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLESENPDKDI 80
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLA GE+G R A+P SRI
Sbjct: 81 HLYINSPGGSVTAGMSIYDTMQFIKPAVSTMCIGQAASMGAFLLAAGEQGKRFALPNSRI 140
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L+++ + + LS T
Sbjct: 141 MIHQPLGGFQGQASDIEIHAREILKIKSRLNELLSHHT 178
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 12/191 (6%)
Query: 38 NLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRE 97
N E + R LYSG ++ I G + M I T G G + D+++ L RE
Sbjct: 5 NFGFEHHAR---KLYSGA-IEQGITGSLVPMVI-------ETSGRGERAF-DIFSRLLRE 52
Query: 98 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSP 157
R+IF+G IDE + I+A +++L+S D + +Y+Y+N PGG V+ L IYDTMQ ++
Sbjct: 53 RIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPD 112
Query: 158 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
V T CVG A + FLLA G KG R+++P SRI + P+G A+GQ DI +A E+ ++R
Sbjct: 113 VSTVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIR 172
Query: 218 DYIFKELSRKT 228
+ + L+ T
Sbjct: 173 RLLEEILASHT 183
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 123 PLGGAQGQATDIEIQAREIL 142
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IFIG I+++ +N ++A ML+L+S D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V LAIYDTMQ ++S V T CVG A + LLA G +G R +P SRI
Sbjct: 62 LYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L P G A+GQA D+ A E+++ ++ + + L+ T
Sbjct: 122 LHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHT 158
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G +D++ +N I+A ML+L+S D K +++
Sbjct: 5 PMVVEQT-GRGERAY-DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ PV T CVG A + LLA G +G R A+P +RI +
Sbjct: 63 YINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMI 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G +GQA DI A E+LR+R+ + L+ T
Sbjct: 123 HQPWGGFQGQATDINIHAQEILRLRETLNGVLASHT 158
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL+S D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLL+ G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L+R T
Sbjct: 133 QATDISIHANELLKIKDRLAELLARNT 159
>gi|145642383|ref|ZP_01797943.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae R3021]
gi|145272926|gb|EDK12812.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.4-21]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +KS + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKSDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 93/140 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 74 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 133
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ L+R T
Sbjct: 134 QAKEILRLREVGNHILARHT 153
>gi|423418841|ref|ZP_17395930.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401105447|gb|EJQ13414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I + I +E +N ++A +L+LD+ D K +
Sbjct: 5 PYVVEQTNRGERSY---DIYSRLLKDRIIMLTGEITDELANGVVAQLLFLDADDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAI+DTMQ +K+ V T CVG A + FLLAGGEKG R A+P + +
Sbjct: 62 IYINSPGGSITAGLAIFDTMQIIKADVSTLCVGMAASMGAFLLAGGEKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI A +L +R+ + + LS +T
Sbjct: 122 IHQPLGGARGQATDIEISAKRILHMRERLNQILSERT 158
>gi|417852109|ref|ZP_12497751.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338217778|gb|EGP03617.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+G +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTARGERSY---DIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T CVG A + FLLAGG G R A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|239948026|ref|ZP_04699779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922302|gb|EER22326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 201
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG +T LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI
Sbjct: 61 YMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQE 161
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L +++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKNLLNEHLASHT 156
>gi|339007540|ref|ZP_08640114.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|421870979|ref|ZP_16302601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|338774743|gb|EGP34272.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|372459606|emb|CCF12150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 192
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G ID+E +N ++A +L+L+S + K +
Sbjct: 4 PMVVEQTNRGERAY---DIYSRLLKDRIIFLGSEIDDEIANAVVAQLLFLESEEPGKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +KS V T C+G A + LLA G KG R A+P S +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQFIKSDVSTICIGMAASMGAVLLAAGAKGKRFALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR AD +++ + + + L+ +T
Sbjct: 121 IHQPLGGVRGQAEDIRIHADWIIKTKRQLNEILAERT 157
>gi|307107893|gb|EFN56134.1| hypothetical protein CHLNCDRAFT_56121 [Chlorella variabilis]
Length = 209
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 89/132 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++ + ID+ SN I+A +LYL+S + K + +YIN PGG VT LAIY
Sbjct: 17 DIYSRLLRERIVCVNGPIDDHLSNLIVAQLLYLESENPEKPISLYINSPGGVVTAGLAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ PVGT VG A +A LLA GE G R ++P SR+ + P+G ARGQA DI
Sbjct: 77 DTMQYIRCPVGTLAVGQAASMASLLLAAGEAGQRRSLPHSRVMVHQPSGGARGQATDIAI 136
Query: 209 EADELLRVRDYI 220
A E+L++R+ +
Sbjct: 137 AAKEILKMRELL 148
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL+S D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLL+ G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L+R T
Sbjct: 133 QATDISIHANELLKIKDRLAELLARNT 159
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+ G KG R A+P +RI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR 217
+ P G ARGQA DI+ +A+E+LR++
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLK 147
>gi|402703462|ref|ZP_10851441.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
helvetica C9P9]
Length = 201
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGEKG R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G +GQA DI A E L+++ I S+ T
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKKLINGLYSKHT 158
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELL----RVRDYI 220
+ P G A+GQA DI +A E+L R+ DY+
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKRRLNDYL 153
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 92/141 (65%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L ++R++FIG I++E +N I+A +L+L D K + +YIN PGG VT +AI
Sbjct: 1 MDIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAI 60
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTM L V T C+G A + LLAGG KG R A+P SR+ + P+G A GQA DI
Sbjct: 61 YDTMNFLSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRVMIHQPSGGAGGQASDIS 120
Query: 208 NEADELLRVRDYIFKELSRKT 228
+A E++R R+ + K L+ KT
Sbjct: 121 IQAKEIIRWRETLNKVLAEKT 141
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ +++E +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ESSGRGERAF-DIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + I+DTM ++ V T C+G A + FLL+ GEKG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGKLNQHLADHT 156
>gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus
profundus DSM 14977]
gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus
profundus DSM 14977]
Length = 194
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 96/140 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A ML+L++ + ++ + +YIN PGGDV LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDSQVANTIVAQMLFLEAQNPNQEIKLYINSPGGDVYAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KSPV T VG A + FLLA GE G R A+P +R+ + P G A+GQA DI
Sbjct: 78 DTMQYVKSPVATIVVGMAASMGAFLLAAGEAGQRYALPHARVMIHQPWGGAQGQATDIAI 137
Query: 209 EADELLRVRDYIFKELSRKT 228
+A+++L+ + + + L++ T
Sbjct: 138 QAEQILKSKKLLNELLAKHT 157
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R++F+G ID+ SN ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++ + + ++ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILRMKKKLNELMAEHT 157
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 93/140 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I+++ +N ++A +L+LD+ D K +++YIN PGG ++ +AI+
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDIHLYINSPGGSISAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A + FLLA GE G R A+P S I + P G A GQA DI
Sbjct: 79 DTMQFIKSDVSTICVGLAASMGAFLLAAGEIGKRYALPNSEIMIHQPLGGAEGQASDIEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A +LR+R+ + L+ +T
Sbjct: 139 RAKRILRMREKLNHILAERT 158
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L + R++F+G I++E +N ++A +L+L+S D K +
Sbjct: 3 VPIVIEQTPRGERAY---DIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG+V+ LAIYDTM+ +K V T CVG A +A LLA G+KG R A+P SR+
Sbjct: 60 YLYINSPGGEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A G A DI E+L+++ + + L+ T
Sbjct: 120 MIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAHHT 157
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 109/180 (60%), Gaps = 9/180 (5%)
Query: 49 KSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDE 108
+ LYSG ++ IR + M I T G G + D+++ L RER+IF+G IDE
Sbjct: 13 RKLYSGA-IEEGIRNTLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGSGIDE 63
Query: 109 EFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 168
+ ++A +++L+S D + +++YIN PGG V+ L IYDTMQ ++ + T CVG A
Sbjct: 64 HVAGLVMAQLIFLESEDPERDIFIYINSPGGSVSAGLGIYDTMQYIRPDIATVCVGMAAS 123
Query: 169 LAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ FLLA G KG R+++P SRI + P+G A+GQ DI +A E+ ++R + + L++ T
Sbjct: 124 MGAFLLASGTKGKRASLPHSRIMIHQPSGGAQGQETDIIIQAREIEKIRKLLEELLAKHT 183
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774981|ref|YP_005177224.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|383310944|ref|YP_005363754.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834993|ref|YP_006240310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|417854851|ref|ZP_12500118.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421255199|ref|ZP_15709765.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421262286|ref|ZP_15713573.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|421264724|ref|ZP_15715690.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064713|ref|ZP_18467838.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
gi|18202809|sp|Q9CJM2.1|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217272|gb|EGP03161.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|356597529|gb|AET16255.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|380872216|gb|AFF24583.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201696|gb|AFI46551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|401687836|gb|EJS83533.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689639|gb|EJS85037.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|401690987|gb|EJS86083.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404380899|gb|EJZ77388.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
Length = 193
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+G +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTARGERSY---DIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T CVG A + FLLAGG G R A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+ + L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVR 217
SRI + P G RGQA DI +A E+LR++
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMK 149
>gi|221218018|ref|ZP_03589484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 72a]
gi|221191966|gb|EEE18187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 72a]
Length = 194
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D SK +Y
Sbjct: 6 PTVIENT---GNYERVFDIYSRLLRERIIFLSGEINDSKADTVIAQLLFLESEDSSKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 193
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDSEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNT 159
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G A+GQA DI +A E+L R+ DY+
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYL 152
>gi|398805269|ref|ZP_10564248.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
gi|398092050|gb|EJL82472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
Length = 218
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 2/182 (1%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
V S+Y G+ P G + +G ++ G G + D+++ L +ERVIF+ +
Sbjct: 3 VRNSIYGGVHT-GPQAGALDAQALGMVPMVIEQSGRGERSY-DIYSRLLKERVIFLVGPV 60
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
+++ +N ++A +L+L+S + K + YIN PGG VT +AIYDTMQ +K V T CVG A
Sbjct: 61 NDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMA 120
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ FLL+ G KG R ++P SR+ + P+G A+GQA DI A ++L+ RD + + L+
Sbjct: 121 ASMGAFLLSAGAKGKRFSLPNSRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAA 180
Query: 227 KT 228
T
Sbjct: 181 NT 182
>gi|91793847|ref|YP_563498.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
denitrificans OS217]
gi|123356647|sp|Q12LA1.1|CLPP_SHEDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91715849|gb|ABE55775.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
denitrificans OS217]
Length = 203
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLAEHT 167
>gi|315650622|ref|ZP_07903682.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487119|gb|EFU77441.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 193
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 106/159 (66%), Gaps = 4/159 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A +A FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+ P+G A+GQA +IR A+++L+ R+ + K L+ T+
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTN 159
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R+IF+GQ + + +N I+A ML+LD+ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L IYDTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKRLNQSLADHT 156
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 98/146 (67%), Gaps = 2/146 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ SN ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLANSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVR 217
+ P G +GQA DI A E+LR++
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILRMK 146
>gi|436842089|ref|YP_007326467.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170995|emb|CCO24366.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 202
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 12/174 (6%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GT ++ T G + D+++ L ++R+I + +++ ++ I A +L+L+S D K +
Sbjct: 3 GTIPIVIETTGRTERAY-DIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKEI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ + +PV T C+G A + FLL+ GEKG+R ++P SRI
Sbjct: 62 YMYINSPGGVVTAGMAIYDTMQYISAPVSTLCMGQAASMGAFLLSAGEKGHRYSLPHSRI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ P G A+GQA DI +A E+LR++ + +E+ + TD + F
Sbjct: 122 LIHQPLGGAQGQATDIGIQAKEILRLKKSLNSIMAANTGKSLEEVEKDTDRDYF 175
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 67 MMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M + P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A +L+L++ D
Sbjct: 1 MSSLLVPIVVEQTSRGERAY---DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAED 57
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +++YIN PGG VT +AIYDTMQ ++ V T C+G A +A FLLA G KG R A+
Sbjct: 58 PEKDIHLYINSPGGLVTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYAL 117
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P +RI L P G +GQA ++ A E++R+R + + LS+ T
Sbjct: 118 PYARIMLHQPLGGFQGQATEVEIHAREIMRMRQVLNELLSKHT 160
>gi|383501651|ref|YP_005415010.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
australis str. Cutlack]
gi|378932662|gb|AFC71167.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
australis str. Cutlack]
Length = 201
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ I++ +N I+A +L+L++ + K +
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTIEDHMANLIVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + FLL GG +G R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGTQGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKNTGQE 161
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+GQ + + +N I+A ML+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT L I+DTM ++ V T CVG A + FLLA G+KG R ++P +RI +
Sbjct: 61 YVNSPGGSVTAGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + L++ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNGALAKNT 156
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Query: 56 RNDKPIRGR-IAMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R A MP+ P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRAAMPVSAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ T
Sbjct: 124 FLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHT 180
>gi|392572059|gb|EIW65231.1| hypothetical protein TRAVEDRAFT_55853 [Trametes versicolor
FP-101664 SS1]
Length = 257
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 12/218 (5%)
Query: 15 SCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPK 74
SC +L + ++PS+ ++ R+H +G+ N +RG +
Sbjct: 8 SCLKELAKSRRQETPSI---------TKYARRLHP--VAGLGNWNALRGHAHPVTANLVP 56
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RERVI + I + S ++A +L+L++ + SK +++Y+
Sbjct: 57 IVIEQTGRGERSY-DIFSRLLRERVIMLYGPIMDTDSALVVAQLLFLEAEETSKPIHVYV 115
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTMQ + SP+ T+CVG A + LL GEKG R A+P S I +
Sbjct: 116 NSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLVAGEKGKRHALPNSSIMIHQ 175
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
P+G A GQA DI A E+LRVR+ + + +EG
Sbjct: 176 PSGGASGQATDIAIHAKEILRVREVLTGIYQKHCAHEG 213
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
cytotoxicus NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERT 158
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|409912312|ref|YP_006890777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
gi|60389697|sp|Q74C82.1|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G +D+ +N ++A ML+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K+PV T CVG A + LL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L+++ + + L+ T
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENT 157
>gi|380448728|ref|YP_005352732.1| clpP gene product (chloroplast) [Ginkgo biloba]
gi|350996628|gb|AEQ37138.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ginkgo biloba]
gi|372862363|gb|AEX98445.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ginkgo biloba]
gi|372862785|gb|AEX98862.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ginkgo biloba]
gi|372862955|gb|AEX99030.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ginkgo biloba]
Length = 199
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 4/162 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D+E +NQ++ M+Y + D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQQVDDEIANQLIGIMMYPNGEDEN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 60 KDIYTYINSPGGTVIPGISLYDAMQFVVPDVHTICMGLAASMGSSVSTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ I PA + GQA + EA+E+L++RD I ++T
Sbjct: 120 AMI--HQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 159
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHT 156
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G +++ SN I+A ML+L++ D K +Y+YIN PGG +T LAIY
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPGGSITAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P SRI + P G A+G A DI
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMIHQPWGGAQGTAKDIEI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR++ + K LS T
Sbjct: 140 QAQEILRMKKMLNKILSEHT 159
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 93/142 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G I++E +N ++A ML+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P +RI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTDY 230
+A E+LR++ Y+ + + T +
Sbjct: 138 QAKEILRLKAYLNGIIVKHTGH 159
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416404722|ref|ZP_11687744.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357261483|gb|EHJ10747.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 202
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
P G A+GQA DI +A E+L ++ + L+ T+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLASHTE 157
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8.1|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+Y+
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYV 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A+GQ DI +A E+ ++R + + L+ T
Sbjct: 150 PSGGAQGQESDIIIQAREIEKIRRLLEEILASHT 183
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 5/150 (3%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID+ +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI 220
P G ARGQA DI +A E+L R+ +Y+
Sbjct: 123 PLGGARGQATDIEIQAREILYHKRRLNEYL 152
>gi|308311726|gb|ADO27637.1| clpP [Rhizanthella gardneri]
Length = 157
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Query: 80 PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG 139
PGE W+D++N LYRER++F+GQ +D E SNQ++ M+YL D+++ ++++IN PGG
Sbjct: 1 PGEEDAIWIDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNTRDLHLFINSPGG 60
Query: 140 DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA 199
V P ++IYDTMQ + V T C+G A + +L GGE R A P +R+ + PA +
Sbjct: 61 WVIPGISIYDTMQFVPPAVHTVCIGLAASIGSLILVGGEITKRIAFPHARVMIHQPASSF 120
Query: 200 -RGQADDIRNEADELLRVRDYIFKELSRKT 228
Q + EA+E L++R+ I K ++T
Sbjct: 121 YESQVGEFILEAEEFLKLRETILKVYVQRT 150
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 12/170 (7%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYI-------FKELSRKTDYEGF 233
P G A+GQA DI +A E+L R+ +++ F+ +S T+ + F
Sbjct: 123 PLGGAQGQATDIAIQAREILYHKQRLNEFLADHTGQPFERISEDTERDFF 172
>gi|330814219|ref|YP_004358458.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487314|gb|AEA81719.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 204
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L +ER+IF+ I+ + S+ I A +L+L+S ++SK +
Sbjct: 13 VPMVVEQTPRGERAY---DIYSRLLKERIIFLVGPINSQVSSLISAQLLFLESENNSKEI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+MYIN PGG VT LAIYDTMQ +K V T C+G A + FLLA GEKG R ++P SR+
Sbjct: 70 FMYINSPGGIVTDGLAIYDTMQYIKPAVATLCIGQACSMGSFLLAAGEKGQRMSLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+ +GQA DI A+E+++ + + + S+ T
Sbjct: 130 MVHQPSAGFQGQATDIEIHANEIMQTKKKLNEIYSKHT 167
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N I+A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR A+ +++ + + + LS +T
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWIMKTKRQLNEILSERT 157
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IFIG ID+ +N ++A L+L++ D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + FLLA G G R A+P++RI + P G +GQA DI
Sbjct: 80 DTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQGQATDIDI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
A E+LR++D + L+ T
Sbjct: 140 HAKEILRMKDLLNDRLAHHT 159
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER++F+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELL----RVRDYI 220
+ P G A+GQA DI +A E+L R+ DY+
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKRRLNDYL 153
>gi|349685703|ref|ZP_08896845.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 211
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ S + A +LYL+SV+ +K +
Sbjct: 15 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPTKEI 71
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++ PV T C+G A + LLAGGEKG R A+P SR+
Sbjct: 72 SFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRV 131
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I+KE + +T
Sbjct: 132 MVHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYKEHTGRT 172
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 10/181 (5%)
Query: 57 NDKPIRGR------IAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNID 107
+ PI+ R A+MP P VL G G + D+++ L RER+IF+G ID
Sbjct: 6 SSHPIQNRWTGIRPTAVMPSAAPGVLPTVVEQSGRGERAF-DIYSRLLRERIIFLGTGID 64
Query: 108 EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
++ ++ ++A +L+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A
Sbjct: 65 DQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAA 124
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++
Sbjct: 125 SMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAQEILYLKETLNGLMAEH 184
Query: 228 T 228
T
Sbjct: 185 T 185
>gi|407713410|ref|YP_006833975.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235594|gb|AFT85793.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 211
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 18 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 76
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 77 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 136
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +++ + L+ T
Sbjct: 137 VMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHT 175
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
fibrisolvens 16/4]
Length = 194
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 101/153 (66%), Gaps = 5/153 (3%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R++F+G+ ++E ++ +A +L+L+S D SK +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K V T C+G A + FLLAGG+KG R A+P + + + P G A+
Sbjct: 71 VTAGMAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGQKGKRFALPNAEVMIHQPLGGAK 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT--DYE 231
GQA +I A +L+ R+ + + L+ T DYE
Sbjct: 131 GQATEIEIAAKNILKTREKLNRMLAANTGKDYE 163
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +++ + L+ T
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHT 181
>gi|208779709|ref|ZP_03247053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
gi|208744164|gb|EDZ90464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
Length = 201
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D +K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPNKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI A +LR++D + K L+ T
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHT 161
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G I++ +N I+A ML+L + D +K +
Sbjct: 17 PYVVEQTSRGERSY---DIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQ 73
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG ++ AIYDTMQ +K + T C+G A + FLL+ G KG R A+P S +
Sbjct: 74 LYINSPGGSISAGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSSGTKGKRLALPNSEVM 133
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI A +LR+RD + + LS +T
Sbjct: 134 IHQPLGGAQGQASDIEISAKRILRMRDRLNQLLSDQT 170
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 89/132 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYI 220
+A E+LR+R Y+
Sbjct: 138 QAKEILRLRSYL 149
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDKLAELLAKNT 159
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE S+ D+++ L +ER+IF+G ID+ +N ++A +L+L+S D SK +
Sbjct: 4 PMVVEHTSRGERSY---DIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDIN 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDTMQ +K V T CVG A + FLLA G KG R A+P +R+
Sbjct: 61 IYINSPGGVVTAGFAIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRFALPNARVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L+++ ++ + L+ T
Sbjct: 121 IHQPLGGFQGQATDIAIHAKEILKMKSHLNELLAHHT 157
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDKLAELLAKNT 159
>gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
H16]
gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus
taiwanensis LMG 19424]
gi|339325652|ref|YP_004685345.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
gi|123033071|sp|Q0KBK4.1|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706449|sp|B3R4W1.1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16]
gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Cupriavidus taiwanensis LMG 19424]
gi|338165809|gb|AEI76864.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
Length = 216
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 VSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
I + P G ARGQA DI +A E+L +R+ + ++++R TD + F
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNF 196
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNT 159
>gi|336398035|ref|ZP_08578835.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prevotella
multisaccharivorax DSM 17128]
gi|336067771|gb|EGN56405.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prevotella
multisaccharivorax DSM 17128]
Length = 221
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 90/138 (65%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD+ K + +Y+N PGG VT L I
Sbjct: 46 MDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDNGKDISIYVNSPGGSVTAGLGI 105
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 106 YDTMQFITSDVATICTGMAASMAAMLLVSGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 165
Query: 208 NEADELLRVRDYIFKELS 225
EA E+L+ + ++ +S
Sbjct: 166 IEAKEILKFKKELYTIIS 183
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNT 159
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 202
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM ++ V T C G A + FLL+ G KG R ++P +RI +
Sbjct: 63 NSPGGSVTAGMGIFDTMNHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNARIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
P G A+GQA DI +A E+L + + + L+ TD
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRRLNEYLAAHTD 157
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 123 PLGGAQGQATDIEIQAREIL 142
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 200
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 4/165 (2%)
Query: 67 MMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
M PI P VL G G + D+++ L RER+IF+G +++++ ++ ++A ML+L++
Sbjct: 1 MYPISGPGVLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEA 59
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R
Sbjct: 60 EDPEKDIQLYINSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRV 119
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
++P SRI + P G A+GQA +I +A E+L +++ + LS T
Sbjct: 120 SLPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNGLLSEHT 164
>gi|21674371|ref|NP_662436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
gi|25008303|sp|Q8KC73.1|CLPP_CHLTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21647550|gb|AAM72778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
Length = 225
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 49 KSLYSG-IRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNID 107
K LYSG I N I ++ M I T G G + D+++ L RER+IF+G ID
Sbjct: 13 KKLYSGAIENS--INSQLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGSPID 62
Query: 108 EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
E + I+A +++L+S D + +Y+YIN PGG V+ L IYDTMQ ++ + T CVG A
Sbjct: 63 EHVAGLIIAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAA 122
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ FLLA G G R+++P SRI + P+G A+GQ DI +A E+ ++R + L++
Sbjct: 123 SMGAFLLASGTSGKRASLPHSRIMIHQPSGGAQGQETDILIQAREIEKIRHLLEDLLAKH 182
Query: 228 TDYE 231
T E
Sbjct: 183 TGQE 186
>gi|224533546|ref|ZP_03674135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi CA-11.2a]
gi|224513219|gb|EEF83581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi CA-11.2a]
Length = 194
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D SK +Y
Sbjct: 6 PTVIENT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGTKGKRESLTYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNT 159
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
Length = 193
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKT 228
QA DI A+ELL+++D + + L++ T
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNT 159
>gi|216264918|ref|ZP_03436910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 156a]
gi|225548921|ref|ZP_03769898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 94a]
gi|226321180|ref|ZP_03796719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 29805]
gi|215981391|gb|EEC22198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 156a]
gi|225370524|gb|EEG99960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 94a]
gi|226233413|gb|EEH32155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 29805]
Length = 194
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D SK +Y
Sbjct: 6 PTVIENT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|195941431|ref|ZP_03086813.1| ATP-dependent Clp protease proteolytic component (clpP-1) [Borrelia
burgdorferi 80a]
gi|218249848|ref|YP_002375116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi ZS7]
gi|223889055|ref|ZP_03623645.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 64b]
gi|224532428|ref|ZP_03673055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi WI91-23]
gi|225549547|ref|ZP_03770513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 118a]
gi|226321916|ref|ZP_03797442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi Bol26]
gi|365992374|ref|NP_212745.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi B31]
gi|387826247|ref|YP_005805700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi JD1]
gi|387827511|ref|YP_005806793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi N40]
gi|384872324|sp|O51556.2|CLPP1_BORBU RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|218165036|gb|ACK75097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi ZS7]
gi|223885481|gb|EEF56581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 64b]
gi|224512638|gb|EEF83012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi WI91-23]
gi|225369824|gb|EEG99271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 118a]
gi|226233105|gb|EEH31858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi Bol26]
gi|312147788|gb|ADQ30447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi JD1]
gi|312149314|gb|ADQ29385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi N40]
gi|356609378|gb|AAC66964.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi B31]
Length = 194
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D SK +Y
Sbjct: 6 PTVIENT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++FIG ID+ +N ++A +L+L+S D K +++YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LL G KG R A+P +R+ + P G A+GQA DI
Sbjct: 79 DTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARVMIHQPHGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A E+LR+R+ L+R +
Sbjct: 139 HAREILRLREIGADILARHS 158
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++FIG ID+ ++ ++A +L+L+S D K +
Sbjct: 4 VPIVIEQTNRGERAY---DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTMQ +K V T C+G A + LLAGG G R A+P SRI
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +G+A DI A E+LR+R+ + + L + T
Sbjct: 121 MIHQPWGGVQGRALDIETHAKEILRLREVLNEILVKHT 158
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 196
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 6/154 (3%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER+IF+GQ + +E +N ++A +L L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGDRAF-DIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM +K V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIKPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
P G A+GQA DI +A E+L Y+ K+L+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEIL----YLKKQLNH 150
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLANHT 156
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ + +E SN ++A +LYL++ D K +Y+
Sbjct: 3 PTVI-ESSGRGDRAF-DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + ++DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L +++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKNKLNQHLADHT 156
>gi|24373360|ref|NP_717403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
oneidensis MR-1]
gi|60389791|sp|Q8EG19.1|CLPP_SHEON RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24347620|gb|AAN54847.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
oneidensis MR-1]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHT 166
>gi|116243161|sp|Q1RJH2.2|CLPP_RICBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 227
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ I++ +N I A +L+L++ + K +
Sbjct: 26 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 82
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + FLL GGEKG R ++P SR+
Sbjct: 83 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G RGQA DI A E L+++ + S+ T
Sbjct: 143 MIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHT 180
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 23 GLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGE 82
+K Q ++ G KP L R SL I + +P I P ++ G
Sbjct: 15 AVKGQGNTIGGIFKPILKTMIESR---SLDYTISSKRP--SEIYAAPESVVPMVVEQSGV 69
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G + D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V
Sbjct: 70 GERAF-DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVY 128
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQ
Sbjct: 129 AGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQ 188
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT 228
A +I +A E+L ++ + L+ T
Sbjct: 189 AVEIEIQAKEILYIKKRLNDMLAEHT 214
>gi|58038575|ref|YP_190539.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
gi|67460438|sp|Q5FUR3.1|CLPP1_GLUOX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|58000989|gb|AAW59883.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
Length = 215
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 107/161 (66%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ + ++ S+ I A +LYL+SV+ +K +
Sbjct: 17 VPMVVEQTARGERSF---DIFSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKEI 73
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++ PV T C+G A + LLAGGEKG+R A+P +R+
Sbjct: 74 SFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARV 133
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I++E + +T
Sbjct: 134 MVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQT 174
>gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
metallidurans CH34]
gi|430810194|ref|ZP_19437309.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
gi|116243154|sp|Q1LM62.1|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Cupriavidus metallidurans CH34]
gi|429497428|gb|EKZ95961.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
Length = 216
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 VSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
I + P G ARGQA DI +A E+L +R+ + ++++R TD + F
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNF 196
>gi|261415786|ref|YP_003249469.1| endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790679|ref|YP_005821802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L +ER+IF+G I++E +N ++A +++L+ + K + +
Sbjct: 4 PTVI-ETTGRGERAY-DIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDITL 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ ++ + T C+G +A LLA G KG R A+P SRI L
Sbjct: 62 YINSPGGYVSAGLAIYDTMQHVRPNIATICIGSCASMAAVLLAAGTKGKRYALPHSRIML 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+GAA GQ+ DI+ A E++R +D + + +++ T
Sbjct: 122 HQPSGAATGQSTDIQITAKEIIRTKDTLTEIVAKHT 157
>gi|91205226|ref|YP_537581.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157827437|ref|YP_001496501.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
gi|91068770|gb|ABE04492.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157802741|gb|ABV79464.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
Length = 264
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ I++ +N I A +L+L++ + K +
Sbjct: 63 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 119
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + FLL GGEKG R ++P SR+
Sbjct: 120 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 179
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G RGQA DI A E L+++ + S+ T
Sbjct: 180 MIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHT 217
>gi|117921102|ref|YP_870294.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
ANA-3]
gi|166214711|sp|A0KYL9.1|CLPP_SHESA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117613434|gb|ABK48888.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
ANA-3]
Length = 202
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++ + LS T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHT 166
>gi|56707749|ref|YP_169645.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis SCHU S4]
gi|89256249|ref|YP_513611.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica LVS]
gi|110670220|ref|YP_666777.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis FSC198]
gi|115314706|ref|YP_763429.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica OSU18]
gi|118497648|ref|YP_898698.1| ATP-dependent Clp protease proteolytic subunit [Francisella
novicida U112]
gi|134302069|ref|YP_001122038.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis WY96-3418]
gi|156502310|ref|YP_001428375.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|187931471|ref|YP_001891455.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323619|ref|ZP_03057395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTE]
gi|254367562|ref|ZP_04983588.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|254369239|ref|ZP_04985251.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370252|ref|ZP_04986258.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|254373013|ref|ZP_04988502.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374463|ref|ZP_04989944.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|254874562|ref|ZP_05247272.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|290953590|ref|ZP_06558211.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica URFT1]
gi|379716999|ref|YP_005305335.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725603|ref|YP_005317789.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|385793031|ref|YP_005826007.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794385|ref|YP_005830791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|421751883|ref|ZP_16188920.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|421753738|ref|ZP_16190727.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|421755254|ref|ZP_16192204.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|421757464|ref|ZP_16194344.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|421759321|ref|ZP_16196154.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|422938668|ref|YP_007011815.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|423050597|ref|YP_007009031.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
gi|424674639|ref|ZP_18111555.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|67460184|sp|Q5NH47.1|CLPP_FRATT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243138|sp|Q2A3U1.1|CLPP_FRATH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122325271|sp|Q0BM92.1|CLPP_FRATO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122971012|sp|Q14IJ9.1|CLPP_FRAT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201822|sp|A7NBR6.1|CLPP_FRATF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201823|sp|A0Q6S9.1|CLPP_FRATN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201824|sp|A4IYB6.1|CLPP_FRATW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706451|sp|B2SG18.1|CLPP_FRATM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56604241|emb|CAG45257.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144080|emb|CAJ79331.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica LVS]
gi|110320553|emb|CAL08640.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC198]
gi|115129605|gb|ABI82792.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|118423554|gb|ABK89944.1| ATP-dependent Clp protease subunit P [Francisella novicida U112]
gi|134049846|gb|ABO46917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134253378|gb|EBA52472.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|151568496|gb|EDN34150.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|151570740|gb|EDN36394.1| ATP-dependent Clp protease subunit P [Francisella novicida
GA99-3549]
gi|151572182|gb|EDN37836.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|156252913|gb|ABU61419.1| ATP-dependent Clp protease, proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122189|gb|EDO66329.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712380|gb|ACD30677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194321983|gb|EDX19465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. novicida FTE]
gi|254840561|gb|EET18997.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158920|gb|ADA78311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|332678356|gb|AEE87485.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida Fx1]
gi|377827052|gb|AFB80300.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|377828676|gb|AFB78755.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|407293819|gb|AFT92725.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|409086420|gb|EKM86539.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|409086610|gb|EKM86726.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|409088589|gb|EKM88653.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|409091047|gb|EKM91052.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|409092552|gb|EKM92523.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|417434683|gb|EKT89625.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|421951319|gb|AFX70568.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
Length = 201
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI A +LR++D + K L+ T
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHT 161
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N ++A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR A+ +++ + + + LS +T
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWIMKTKRQLNEILSERT 157
>gi|220928259|ref|YP_002505168.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulolyticum H10]
gi|254763787|sp|B8I8F5.1|CLPP_CLOCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219998587|gb|ACL75188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulolyticum H10]
Length = 194
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +R+I + +++ ++ I+A MLYL++ D K +
Sbjct: 4 VPMVVEQTNRGERSY---DIFSRLLNDRIIVLSDEVNDATASLIVAQMLYLEAQDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S I
Sbjct: 61 QFYINSPGGSVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI+ A+ +LR RD + K LS +T
Sbjct: 121 MIHQPLGGARGQATDIKIHAENILRTRDKLNKILSERT 158
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 68 MPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+P P VL G G + D+++ L RER+IF+G +++++ ++ ++A ML+L++
Sbjct: 18 LPCSGPGVLPTVIEQSGRGERAF-DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAE 76
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K + +YIN PGG VT LAIYDTMQ + + T C G A + FLLAGG KG R A
Sbjct: 77 DPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLA 136
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P SRI + P G A+GQA +I +A E+L +++ + L+ T
Sbjct: 137 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHT 180
>gi|387824404|ref|YP_005823875.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
gi|328676003|gb|AEB28678.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
Length = 201
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI A +LR++D + K L+ T
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHT 161
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 23 GLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGE 82
+K Q ++ G KP L R SL I + +P I P ++ G
Sbjct: 15 AVKGQGNTIGGIFKPILKTMIESR---SLDYTISSKRP--SEIYAAPENVVPMVVEQSGV 69
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G + D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V
Sbjct: 70 GERAF-DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVY 128
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQ
Sbjct: 129 AGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQ 188
Query: 203 ADDIRNEADELLRVRDYIFKELSRKT 228
A +I +A E+L ++ + L+ T
Sbjct: 189 AVEIEIQAKEILYIKKRLNDMLAEHT 214
>gi|325577258|ref|ZP_08147742.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|419802180|ref|ZP_14327381.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
gi|325160840|gb|EGC72961.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|385191502|gb|EIF38916.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
Length = 193
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M+PI + G G + D+++ L RER+IF+GQ +D E +N I+A +L+LDS D
Sbjct: 29 CMIPI-----VVEQSGRGERAF-DIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSED 82
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +Y+YIN PGG V + I+DTM+ ++ V T C G + FLL+ G KG R ++
Sbjct: 83 SEKDIYLYINSPGGSVMAGMGIFDTMKHIRPDVCTICTGLGASMGAFLLSAGAKGKRMSL 142
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P SRI + P G A+GQA DI +A E+L + + + L+ T
Sbjct: 143 PHSRIMIHQPLGGAQGQATDIEIQAREILYHKQRLNEYLAEHT 185
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A ML+L++ D
Sbjct: 1 MSFYVPYVVEQT-GRGERVY-DIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPD 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG +T LAIYDTM +K V T C+G A +A LL+ G KG R A+P
Sbjct: 59 KDIYLYINSPGGVITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFALPN 118
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G +GQA DI A+E+LR++ + + LS+ T
Sbjct: 119 ARIMIHQPLGGFQGQAKDIEIHANEILRMKKMLNEILSKNT 159
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5.1|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI A +LR++D + K L+ T
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHT 161
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N ++A +L+LD+ D K +Y+
Sbjct: 9 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYL 66
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM+ ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 67 YINSPGGSVTAGMGIFDTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMI 126
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 127 HQPLGGAQGQATDIEIQAKEILYHKQRLNELLAEHT 162
>gi|113970830|ref|YP_734623.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-4]
gi|123029527|sp|Q0HHA1.1|CLPP_SHESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113885514|gb|ABI39566.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-4]
Length = 202
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++ + LS T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHT 166
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310280|ref|ZP_10829246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368732|gb|EJP21739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
Length = 195
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+G ++++ ++ I+A +L+L+S D K ++
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG +T +AIYDTMQ +K V T CVG A + FLL+ G+KG R A+P S I
Sbjct: 62 FYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A+ ++R+R + + ++ +T
Sbjct: 122 IHQPLGGTKGQATDIQIHAERIIRLRKKLNEIMAEQT 158
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHT 167
>gi|114563762|ref|YP_751275.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
frigidimarina NCIMB 400]
gi|122299288|sp|Q07ZX8.1|CLPP_SHEFN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114335055|gb|ABI72437.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
frigidimarina NCIMB 400]
Length = 203
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCMGQAASMGAFLLAGGAKGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHT 167
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ER++F+ +D+ ++ ++A ML+L+S D K +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT AIYDTMQ +K V T C+G A + FLLA G KG R A+P S I + P G AR
Sbjct: 71 VTAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQPMGGAR 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI A++++R++ + + LS +T
Sbjct: 131 GQATDIMIHAEQIVRIKRRLNEILSERT 158
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L + R++F+G I++E +N I+A +L+L+S D K +
Sbjct: 3 VPIVIEQTPRGERAY---DIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG+V+ LAIYDT++ +K V T CVG A +A LLA G+KG R A+P SR+
Sbjct: 60 YLYINSPGGEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A G A DI E+L+++ + + L+ T
Sbjct: 120 MIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAYHT 157
>gi|161486690|ref|YP_719644.2| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
129PT]
Length = 193
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L++ D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|51473702|ref|YP_067459.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. Wilmington]
gi|383752479|ref|YP_005427579.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. TH1527]
gi|383843314|ref|YP_005423817.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. B9991CWPP]
gi|60389549|sp|Q68WL5.1|CLPP_RICTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51460014|gb|AAU03977.1| Caseinolytic protease [Rickettsia typhi str. Wilmington]
gi|380759122|gb|AFE54357.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. TH1527]
gi|380759961|gb|AFE55195.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. B9991CWPP]
Length = 201
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +Y
Sbjct: 5 PVVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGE G R ++P SRI
Sbjct: 62 MYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+ P+G +GQA DI A E L+++ + + S+ T+
Sbjct: 122 IHQPSGGYKGQATDIEIHARETLKIKKLLNELYSKHTE 159
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392940442|ref|ZP_10306086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392292192|gb|EIW00636.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
Length = 195
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R++F+G+ I++ ++ ++A +L+L++ D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T AIYDTMQ +K V T CVG A +A FLLA G KG R A+P S I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A+ +L++RD + K L+ T
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENT 158
>gi|329114674|ref|ZP_08243433.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
gi|326696154|gb|EGE47836.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
Length = 237
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 120/191 (62%), Gaps = 13/191 (6%)
Query: 45 GRVHKSLY---SGIRNDKPIR-GRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVI 100
GR + Y SG+R+ P+ A++P+ + + GE ++ D+++ L +ER+I
Sbjct: 8 GRANSVFYTGMSGMRDRDPVEIFSNALVPMVVEQT---SRGERAF---DIYSRLLQERII 61
Query: 101 FIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGT 160
F+ + ++ ++ I A +LYL+SV+ +K + YIN PGG V+ LAIYDTMQ ++SPV T
Sbjct: 62 FLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPGGVVSAGLAIYDTMQYIRSPVST 121
Query: 161 HCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR--- 217
C+G A + LLAGGEKG R A+P +R+ + P+G A+GQA DI +A E+L +R
Sbjct: 122 VCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQKL 181
Query: 218 DYIFKELSRKT 228
+ I++E + +T
Sbjct: 182 NEIYREHTGRT 192
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L++ D K +
Sbjct: 9 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ +K V T C+G A +A LLA G KG R ++P SRI
Sbjct: 66 YMYINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G GQA DI A+E+ R++ + + +++ T
Sbjct: 126 MIHQPMGGISGQATDIIIHAEEIKRIKHMLNEIIAKHT 163
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
gi|189082462|sp|A4SDA4.1|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +++Y+
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIFIYV 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A+GQ DI +A E+ ++R + + +++ T
Sbjct: 150 PSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHT 183
>gi|345017119|ref|YP_004819472.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344032462|gb|AEM78188.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 195
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R++F+G+ I++ ++ ++A +L+L++ D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T AIYDTMQ +K V T CVG A +A FLLA G KG R A+P S I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A+ +L++RD + K L+ T
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENT 158
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++F+G + ++ +N I+A +L+L+S D K +++
Sbjct: 7 PYVIEQT-GRGERSY-DIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHL 64
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ +KSPV T CVG A +A LL+GG +G R A+P + + +
Sbjct: 65 YINSPGGSVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKRLALPNAEVMI 124
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G GQA DI A +L R + L+R T
Sbjct: 125 HQPLGGTSGQASDIEIHARNILNTRKRMNAILARHT 160
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L R+R+IF+G I +E +N I+A +L+L+S D K ++ YIN PGG VT LAIY
Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPGGLVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G KG R A+P RI L P G +GQA D+
Sbjct: 79 DTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGFQGQATDVEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L++R+ + L R T
Sbjct: 139 QAKEILKLREELNDILVRHT 158
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 4/162 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE ++ D+++ L ++R+IF+G ID+ +N ++A ML+L++ D
Sbjct: 1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG ++ +AI+DTMQ ++ V T CVG A + FLLA G KG R A+P
Sbjct: 58 DKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
S I + P G +GQA DI A +L +RD + + LS T
Sbjct: 118 NSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEIT 159
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +++ +N I+A ML+L + D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A GQA DI A +L++RD + L+ +T
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKLRDKLNHILAERT 158
>gi|325264756|ref|ZP_08131485.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
gi|324030048|gb|EGB91334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
Length = 193
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + FLL+GG+KG R A+P + I
Sbjct: 61 QLYINSPGGSVTSGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I A+ +L++R + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIHIVAEHILKIRHKLNQILAENT 158
>gi|255944899|ref|XP_002563217.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587952|emb|CAP86021.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 258
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 87/138 (63%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GSW D+++ L +ER+I + +D+ S I+A +L+L++ + SK +++YIN PGG VT
Sbjct: 58 GSWHTYDIFSRLMKERIICLNGQVDDTLSASIVAQLLFLEADNPSKPIHLYINSPGGSVT 117
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTM + SPV T CVG A + LLAGGE G R +P S I + P+G GQ
Sbjct: 118 AGLAIYDTMTYIASPVSTICVGQAASMGSLLLAGGEAGKRYCLPHSSIMVHQPSGGYFGQ 177
Query: 203 ADDIRNEADELLRVRDYI 220
A DI A E+LRVR +
Sbjct: 178 ASDIAIHAKEILRVRTQL 195
>gi|15604378|ref|NP_220894.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Madrid E]
gi|383487344|ref|YP_005405024.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. GvV257]
gi|383487923|ref|YP_005405602.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Chernikova]
gi|383488769|ref|YP_005406447.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Katsinyian]
gi|383489608|ref|YP_005407285.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Dachau]
gi|383499749|ref|YP_005413110.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500585|ref|YP_005413945.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. RpGvF24]
gi|386082369|ref|YP_005998946.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Rp22]
gi|6225160|sp|Q9ZD29.1|CLPP_RICPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|3861070|emb|CAA14970.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT (clpP) [Rickettsia
prowazekii str. Madrid E]
gi|292572133|gb|ADE30048.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Rp22]
gi|380757709|gb|AFE52946.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. GvV257]
gi|380758282|gb|AFE53518.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. RpGvF24]
gi|380760802|gb|AFE49324.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Chernikova]
gi|380761648|gb|AFE50169.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Katsinyian]
gi|380762495|gb|AFE51015.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763331|gb|AFE51850.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Dachau]
Length = 201
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +
Sbjct: 4 VPVVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GGE G R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYKGQATDIEIHARETLKIKRLLNELYSKHTKQE 161
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A ML+L++ D K +
Sbjct: 4 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLA G KG R A+P +RI
Sbjct: 61 HIYINSPGGVVTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR++ + + L++ T
Sbjct: 121 MIHQPLGGVQGQATDIDIHAKEILRMKSVLNELLAKHT 158
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE S+ D+++ L +ER+IF+G +++E +N ++A ML+L++ D K +
Sbjct: 5 PFVIEQTPRGERSY---DIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDIT 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT LAIYDTM+ +K + T C+G A + LLA G KG R A+P +RI
Sbjct: 62 FYINSPGGSVTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARIL 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+LR+R + K L+ T
Sbjct: 122 IHQPMGGFQGQASDIDIHAREILRMRQGLNKMLADHT 158
>gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 224
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 9/185 (4%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIG 103
+ Y I N P + P+ +P +L G G + D+++ L RER+IF+G
Sbjct: 2 IDSCCYHPIHNRWP-----GIRPVSSPGILPTVVEQSGRGERAF-DIYSRLLRERIIFLG 55
Query: 104 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCV 163
+D++ ++ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C
Sbjct: 56 TGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICY 115
Query: 164 GFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKE 223
G A + FLL GG KG R A+P +RI + P G A+GQA DI +A E+L +++ +
Sbjct: 116 GLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGL 175
Query: 224 LSRKT 228
L+ T
Sbjct: 176 LAEHT 180
>gi|340351992|ref|ZP_08674882.1| ATP-dependent Clp protease, protease subunit [Prevotella pallens
ATCC 700821]
gi|339615727|gb|EGQ20397.1| ATP-dependent Clp protease, protease subunit [Prevotella pallens
ATCC 700821]
Length = 229
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG VT L I
Sbjct: 45 MDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVTAGLGI 104
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 105 YDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 164
Query: 208 NEADELLRVRDYIFKELSRKT 228
EA E+++ + ++ +S +
Sbjct: 165 IEAKEIMKFKKELYTIISNHS 185
>gi|170718338|ref|YP_001783566.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
2336]
gi|189082460|sp|B0UW20.1|CLPP_HAES2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|168826467|gb|ACA31838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
somnus 2336]
Length = 193
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L++ D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPNVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|423082887|ref|ZP_17071470.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423086337|ref|ZP_17074746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357547206|gb|EHJ29100.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357547324|gb|EHJ29214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
Length = 194
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G+G + D+++ L ++R+IFIG+ I++ ++ ++A +L+L+S D +
Sbjct: 4 VPHVIEQT-GQGERSY-DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDII 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG T AIYDTM ++ V T C+G A ++ FLLAGG +G R A+P S I
Sbjct: 62 IYINSPGGSTTAGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTRGKRCALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA D++ D +L++++ + + LS T
Sbjct: 122 IHQPMGGAKGQATDVKIAVDNILKIKEQLDRILSENT 158
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L+S D K +
Sbjct: 11 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDI 67
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTMQ +K V T C+G A + LLA G G R A+P SRI
Sbjct: 68 YLYINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRI 127
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A+E+ R+++ + L++ T
Sbjct: 128 MIHQPLGGIQGQATDIIIHAEEIKRIKEMLIDILAKHT 165
>gi|422845319|ref|ZP_16892029.1| ATP-dependent Clp protease, protease subunit [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325684491|gb|EGD26655.1| ATP-dependent Clp protease, protease subunit [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 205
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 60 PIRGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
PI R M+ P V+ +T GE ++ D+++ L ++R+I + ++++ +N I+A +
Sbjct: 5 PITRRKIML---VPTVIEQTARGERAY---DIYSRLLKDRIIMLSGEVNDQMANSIIAQL 58
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
L+LD+ D++K +YMYIN PGG +T +AI DTM +KSPV T G A +A +LA GE
Sbjct: 59 LFLDAQDNTKDIYMYINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGE 118
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
KG R A+P + + + P G A+GQA +I+ A+E+L+ R I + L++ + D E K
Sbjct: 119 KGKRFALPHATVLIHQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIK 176
>gi|417842395|ref|ZP_12488486.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
gi|341947267|gb|EGT73935.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
Length = 193
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNDRLAFHT 158
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ + E SN I+A ML+L++ D + +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V L I+DTM +K V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVYDGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYIKKTLNDALAAHT 156
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGDRAF-DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHT 156
>gi|417839806|ref|ZP_12485973.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
gi|341951681|gb|EGT78241.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
Length = 193
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDATKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IFIG +ID+ ++ +A MLYL+S D K +
Sbjct: 4 VPIVVEQTNRGERAY---DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + LLA G +G R A+P SRI
Sbjct: 61 RLYINSPGGSVTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +G+A DI A E+LR+R+ + + L+ T
Sbjct: 121 MIHQPWGGVQGKAVDIETHAKEILRLRELLNEILANHT 158
>gi|153814157|ref|ZP_01966825.1| hypothetical protein RUMTOR_00366 [Ruminococcus torques ATCC 27756]
gi|317499957|ref|ZP_07958193.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331087820|ref|ZP_08336745.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336438243|ref|ZP_08617883.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_1_57FAA]
gi|145848553|gb|EDK25471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus torques ATCC 27756]
gi|316898674|gb|EFV20709.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330409515|gb|EGG88956.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336014049|gb|EGN43912.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_1_57FAA]
Length = 193
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG+KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGAFLLAGGKKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +LR + + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKQKLNEILAANT 158
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ +D++ +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ESSGRGERAF-DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + ++DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGMFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQKLNQHLADHT 156
>gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
JMP134]
gi|124013825|sp|Q472D3.1|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia
eutropha JMP134]
Length = 216
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 ISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
I + P G ARGQA DI +A E+L +R+ + ++++R TD + F
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNF 196
>gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|67460519|sp|Q7V992.1|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 224
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Query: 60 PIRGR-IAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQIL 115
PI R + P+ +P +L G G + D+++ L RER+IF+G +D++ ++ ++
Sbjct: 9 PIHNRWQGIRPVSSPGILPTVVEQSGRGERAF-DIYSRLLRERIIFLGTGVDDQVADALV 67
Query: 116 ATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLA 175
A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL
Sbjct: 68 AQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLC 127
Query: 176 GGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + L+ T
Sbjct: 128 GGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHT 180
>gi|386819894|ref|ZP_10107110.1| protease subunit of ATP-dependent protease [Joostella marina DSM
19592]
gi|386425000|gb|EIJ38830.1| protease subunit of ATP-dependent protease [Joostella marina DSM
19592]
Length = 225
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Query: 66 AMMPIG-TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
AM P+G TP ++ + + +D+++ L +R+IF+G I+++ +N I A +L+L+S
Sbjct: 28 AMTPVGLTPNIIEER--QLNAVAMDVFSRLMMDRIIFMGTGINDQVANIIQAQLLFLESA 85
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D SK + +YIN PGG V L IYDTMQ +K V T C G A + LL GEKG RSA
Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAGEKGKRSA 145
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
+P SR+ + P G A+GQA DI A E+L++++ +++
Sbjct: 146 LPHSRVMIHQPLGGAQGQASDIEITAREILKLKEELYE 183
>gi|387132184|ref|YP_006298156.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella intermedia 17]
gi|386375032|gb|AFJ08814.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella intermedia 17]
Length = 221
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG VT L I
Sbjct: 45 MDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVTAGLGI 104
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 105 YDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 164
Query: 208 NEADELLRVRDYIFKELSRKT 228
EA E+++ + ++ +S +
Sbjct: 165 IEAKEIMKFKKELYTIISNHS 185
>gi|421745790|ref|ZP_16183628.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
gi|409775704|gb|EKN57162.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
Length = 216
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 107/177 (60%), Gaps = 12/177 (6%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M +G ++ G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S +
Sbjct: 21 MGLGLVPMVVEQSGRGERAY-DIYSRLLKERLVFMVGEVNDQTANLVIAQLLFLESENPD 79
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K V++YIN PGG V+ LA+YDTMQ +K V T C+G A + FLLA G KG R A+P
Sbjct: 80 KDVFLYINSPGGSVSAGLAVYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPN 139
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
SRI + P G ARGQA DI +A E+L +R+ + ++++R TD + F
Sbjct: 140 SRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILAEVTGQPVEKIARDTDRDNF 196
>gi|425066829|ref|ZP_18469949.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
gi|404380615|gb|EJZ77105.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
Length = 188
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ERVIF+G +++ +N I+A +L+L+S D K + +YIN PGG
Sbjct: 9 GERSY---DIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGS 65
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K + T CVG A + FLLAGG G R A+P +R+ + P G R
Sbjct: 66 VTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMIHQPLGGFR 125
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI+ A E+L+++ + + L+ T
Sbjct: 126 GQASDIQIHAQEILKIKQTLNERLAFHT 153
>gi|281421760|ref|ZP_06252759.1| Clp protease [Prevotella copri DSM 18205]
gi|281404255|gb|EFB34935.1| Clp protease [Prevotella copri DSM 18205]
Length = 220
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 90/138 (65%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +Y+N PGG VT L I
Sbjct: 45 MDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDSGKDISIYLNSPGGSVTAGLGI 104
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 105 YDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 164
Query: 208 NEADELLRVRDYIFKELS 225
EA E+L+++ ++ +S
Sbjct: 165 IEAREILKMKKELYTIIS 182
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 15/174 (8%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K +
Sbjct: 8 VPIVVEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDI 64
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T LAI+DTM+ +K V T CVG A + FLLA G K R A P S I
Sbjct: 65 YLYINSPGGSITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEI 124
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ P G A+GQA D+ A +++VRD + + +SR TD + F
Sbjct: 125 MIHQPMGGAQGQATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTF 178
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G K R A+P +RI + P G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGSILLTAGAKAKRYALPHARIMIHQPLGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+LR+R+ L+R T
Sbjct: 140 QAKEILRLREVGNHILARHT 159
>gi|392596999|gb|EIW86321.1| hypothetical protein CONPUDRAFT_46589 [Coniophora puteana
RWD-64-598 SS2]
Length = 238
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L RERVI + I++ S +A +L+L++ + SK +++
Sbjct: 41 PIVIEQT-GRGERSY-DIFSRLLRERVIMLYGPINDNDSALTVAQLLFLEAEETSKPIHL 98
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + SP+ T+CVG A + LLA GEKG R +P + I +
Sbjct: 99 YINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHCLPNASIMI 158
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
P+G A GQA DI A E+LRVR + R + EG
Sbjct: 159 HQPSGGASGQASDIAIHAKEILRVRQLLTSIYQRHCNKEG 198
>gi|337755601|ref|YP_004648112.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
gi|336447206|gb|AEI36512.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
Length = 201
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ ++++ +N ++A +L+L+S D K +Y
Sbjct: 7 VPTVVEKTAG--GERAFDIYSRLLKERIVFLNGEVNDQSANLVIAQLLFLESEDPDKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI A +LR++D + K L+ T
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAYHT 161
>gi|258511812|ref|YP_003185246.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384135662|ref|YP_005518376.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|257478538|gb|ACV58857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289747|gb|AEJ43857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 198
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++ +G ID++ +N I+A +L+L + D K +
Sbjct: 6 PYVIEQTSRGERTY---DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQ 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C+G A + FLLA GEKG R A+P + I
Sbjct: 63 MYINSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G GQA DI+ A+ +L+ +D + + LS +T
Sbjct: 123 IHQPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERT 159
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|398308397|ref|ZP_10511871.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mojavensis
RO-H-1]
gi|419821657|ref|ZP_14345250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|388474293|gb|EIM11023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|350566316|ref|ZP_08935001.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
gi|348662942|gb|EGY79570.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
Length = 194
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L +ER+IF+ I+++ ++ ++A +L+L++ D++K +
Sbjct: 4 VPMVVEQT-GRGERSY-DIYSRLLKERIIFLTGEINDQVADLVVAQLLFLEAEDNTKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ AIYDTMQ +K V T C+G A + FLL G KG R A+P + I
Sbjct: 62 IYINSPGGSVSAGFAIYDTMQYIKCDVSTICMGMAASMGAFLLIAGTKGKRFALPNADIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI+ +A+++L+VR+ + K LS +T
Sbjct: 122 IHQPLGGAQGQATDIKIQAEKILKVRERLNKILSERT 158
>gi|340348780|ref|ZP_08671811.1| ATP-dependent Clp protease, protease subunit [Prevotella nigrescens
ATCC 33563]
gi|445115603|ref|ZP_21378299.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
nigrescens F0103]
gi|339613204|gb|EGQ17989.1| ATP-dependent Clp protease, protease subunit [Prevotella nigrescens
ATCC 33563]
gi|444840370|gb|ELX67404.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
nigrescens F0103]
Length = 221
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG VT L I
Sbjct: 45 MDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVTAGLGI 104
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 105 YDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 164
Query: 208 NEADELLRVRDYIFKELSRKT 228
EA E+++ + ++ +S +
Sbjct: 165 IEAKEIMKFKKELYTIISNHS 185
>gi|218290814|ref|ZP_03494883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|218239172|gb|EED06373.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++ +G ID++ +N I+A +L+L + D K +
Sbjct: 6 PYVIEQTSRGERTY---DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQ 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C+G A + FLLA GEKG R A+P + I
Sbjct: 63 MYINSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G GQA DI+ A+ +L+ +D + + LS +T
Sbjct: 123 IHQPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERT 159
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4.1|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533.1|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R++F+G+ I++ ++ ++A +L+L++ D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T AIYDTMQ +K V T CVG A +A FLLA G KG R A+P S I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A+ +L++RD + K L+ T
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENT 158
>gi|296116539|ref|ZP_06835149.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976751|gb|EFG83519.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 211
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ S + A +LYL+SV+ +K +
Sbjct: 15 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVSAVVSAQLLYLESVNPTKEI 71
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++SPV T C+G A + LLAGGEKG R A+P SR+
Sbjct: 72 SFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRV 131
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR 217
+ P+G A+GQA DI +A E+L +R
Sbjct: 132 MVHQPSGGAQGQASDIEIQATEILTIR 158
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L RER++F+G +D+ ++ I++ +L+L++ D K +Y
Sbjct: 33 VPMVVEQS-GRGERAF-DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIY 90
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDT+Q ++ V T C+G A + FLL+ G KG R A+P +RI
Sbjct: 91 LYINSPGGSVTAGMAIYDTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIM 150
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI +A E+L ++ + + L+ T
Sbjct: 151 IHQPLGGARGQAVDIEIQAKEILYHKNTLNQLLAEHT 187
>gi|301622698|ref|XP_002940664.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Xenopus (Silurana) tropicalis]
Length = 247
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 42 EFYGRVHKSLYSGI------RNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALY 95
E + R + L GI RN RG + P+ P V+ +T G G + D+++ L
Sbjct: 2 ELFVRGTRPLLKGICALAQLRNVH--RGPPVLSPL-VPIVVEQT-GRGERAY-DIYSRLL 56
Query: 96 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLK 155
RER+I + ID+ S+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ +
Sbjct: 57 RERIICVMGPIDDSLSSLVVAQLLFLQSESNKKPIHMYINSPGGSVTAGLAIYDTMQYIL 116
Query: 156 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLR 215
+P+ T CVG A + LLA G G R ++P SRI + P+G ARGQA DI +A+E+L+
Sbjct: 117 NPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILK 176
Query: 216 VRDYIFKELSRKT 228
++ I + ++ T
Sbjct: 177 LKKQINEIYAKHT 189
>gi|148284741|ref|YP_001248831.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189183283|ref|YP_001937068.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
gi|146740180|emb|CAM80416.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189180054|dbj|BAG39834.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 98/150 (65%), Gaps = 4/150 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER++F+ I++ +N ++A +L+L++ K++
Sbjct: 10 VPMVVEQTNRGERAY---DIYSRLLKERIVFVCGEIEDHMANLVVAQLLFLEAESPDKKI 66
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+MYIN PGG VT +AIYDTMQ +KSPV T C+G A + LLA G+K R +P SRI
Sbjct: 67 FMYINSPGGAVTAGMAIYDTMQYIKSPVLTLCLGQACSMGSLLLAAGQKSMRHCLPNSRI 126
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYI 220
+ P+G RGQA DI+ A E+L+++ I
Sbjct: 127 MIHQPSGGFRGQATDIQIHAQEILKMKKII 156
>gi|407981209|ref|ZP_11161953.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
gi|407411926|gb|EKF33805.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + + LS +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLSERT 158
>gi|296330330|ref|ZP_06872811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676065|ref|YP_003867737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|398304937|ref|ZP_10508523.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
vallismortis DV1-F-3]
gi|443630850|ref|ZP_21115031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|296152598|gb|EFG93466.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414309|gb|ADM39428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|443348655|gb|ELS62711.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|148652118|ref|YP_001279211.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter sp.
PRwf-1]
gi|148571202|gb|ABQ93261.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
sp. PRwf-1]
Length = 240
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A ML+L++ + K +
Sbjct: 46 VPMVVEQSARGERSF---DIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPEKDI 102
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM +K V T C+G AY + FLLA G+KG R A+ SR+
Sbjct: 103 HLYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRV 162
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI A E+L++RD + + L+ +T
Sbjct: 163 MIHQPSGGAQGQATDIEINAREILKIRDRLNRILAERT 200
>gi|342905185|ref|ZP_08726974.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|419840044|ref|ZP_14363442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
gi|341951687|gb|EGT78246.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|386908569|gb|EIJ73261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|452973448|gb|EME73270.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sonorensis
L12]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K LS +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNKILSERT 158
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
gi|67460511|sp|Q7UA36.1|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
Length = 224
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 56 RNDKPIRGR-IAMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R A MPI P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRAEMPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYI 220
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ +
Sbjct: 124 FLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETL 172
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4.1|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 105/155 (67%), Gaps = 6/155 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L +ER++F+G I+++ ++ ++A +L+L++ D K ++
Sbjct: 3 VPMVVEQS-GRGERAY-DIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AI+DTM +K+PV T C+G A + LL GEKG R A+P +RI
Sbjct: 61 LYINSPGGVVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ P+G +RGQA DI +A+E+LR++ +EL+R
Sbjct: 121 IHQPSGGSRGQATDIMIQAEEILRMK----RELNR 151
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 6/164 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+G +++ ++ I+A +L+L+S
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +++YIN PGG +T +AIYDTMQ +K V T C+G A + FLL+ G KG R A
Sbjct: 55 DTDKDIHLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P S I + P G RGQA DI A +LR+++ + K LS T
Sbjct: 115 LPNSEIMIHQPLGGFRGQATDIDIHAKRILRMKNDLNKILSENT 158
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 99/148 (66%), Gaps = 4/148 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ R+ GE ++ D+++ L ++R++F+G ID+ +N ++A +L+L+S D K +
Sbjct: 9 VPMVVERSNRGERAY---DIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ ++ V T C+G A + LL G KG R A+PL+RI
Sbjct: 66 HLYINSPGGVVTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRD 218
+ P G A+GQ+ DI+ +A E+LR+R+
Sbjct: 126 MIHQPLGGAQGQSTDIQIQAKEILRLRE 153
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+G ID++ ++ ++A +L+L++ D K + +
Sbjct: 2 PTVVEQS-GRGERSF-DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQI 59
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P +RI +
Sbjct: 60 YINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMI 119
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++D + ++ T
Sbjct: 120 HQPLGGAQGQAVDIEIQAQEILFLKDTLNGLMAEHT 155
>gi|452838282|gb|EME40223.1| ATP-dependent Clp protease-like protein [Dothistroma septosporum
NZE10]
Length = 200
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 91/149 (61%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G W D+++ L +ER+I + ++E S I+A +L+L++ + SK + +YIN PGG VT
Sbjct: 10 GGWHTSDIFSRLLKERIICLNGEVEETTSASIVAQLLFLEAENPSKPISLYINSPGGSVT 69
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++SP+ T C+G A + LL GGEKG R +P SRI + +G GQ
Sbjct: 70 AGLAIYDTMQYIQSPITTICLGQAASMGSLLLCGGEKGQRYCLPHSRIMVHQVSGGYSGQ 129
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTDYE 231
A DI A E+LRVR+ + K R E
Sbjct: 130 ASDIAIHAKEILRVREQLNKIYQRHLTVE 158
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +++ +N I+A ML+L + D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A GQA DI A +L++RD + L+ +T
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKMRDKLNHILAERT 158
>gi|126700971|ref|YP_001089868.1| ATP-dependent Clp protease proteolytic subunit 2 [Clostridium
difficile 630]
gi|254976933|ref|ZP_05273405.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094319|ref|ZP_05323797.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255102503|ref|ZP_05331480.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
gi|255308399|ref|ZP_05352570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316073|ref|ZP_05357656.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518732|ref|ZP_05386408.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651852|ref|ZP_05398754.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|260684879|ref|YP_003216164.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|306521636|ref|ZP_07407983.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362546|ref|YP_006200398.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423089882|ref|ZP_17078228.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252408|emb|CAJ70250.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Clostridium difficile 630]
gi|260211042|emb|CBA66381.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214554|emb|CBE07092.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|357557468|gb|EHJ39008.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G+G + D+++ L ++R+IFIG+ I++ ++ ++A +L+L+S D +
Sbjct: 4 VPHVIEQT-GQGERSY-DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDII 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG T AIYDTM ++ V T C+G A ++ FLLAGG G R A+P S I
Sbjct: 62 IYINSPGGSATSGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA D++ D +L++++ + K LS T
Sbjct: 122 IHQPMGGAKGQATDVKIAVDNILKIKERLDKILSENT 158
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 98
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 99 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 158
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++D + L T
Sbjct: 159 QAREILYIKDRLNTMLVEHT 178
>gi|145628436|ref|ZP_01784237.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|145633845|ref|ZP_01789567.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145637965|ref|ZP_01793604.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145639474|ref|ZP_01795079.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148826642|ref|YP_001291395.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148827882|ref|YP_001292635.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229845547|ref|ZP_04465675.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|229847178|ref|ZP_04467282.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|260583375|ref|ZP_05851146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|319775445|ref|YP_004137933.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
gi|386266553|ref|YP_005830045.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|166201826|sp|A5UE11.1|CLPP_HAEIE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201827|sp|A5UHJ6.1|CLPP_HAEIG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|144980211|gb|EDJ89870.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|144985287|gb|EDJ92126.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145268831|gb|EDK08795.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145271521|gb|EDK11433.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148716802|gb|ABQ99012.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148719124|gb|ABR00252.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229809854|gb|EEP45576.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|229811563|gb|EEP47264.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|260093580|gb|EEW77497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|309751687|gb|ADO81671.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2866]
gi|309973789|gb|ADO96990.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|317450036|emb|CBY86250.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|350267685|ref|YP_004878992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349600572|gb|AEP88360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 198
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG I++ +N ++A L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K PV T C+G A + FLLA G KG R ++P +RI
Sbjct: 62 HLYINSPGGVVTAGMAIYDTMQYIKCPVSTICLGQAASMGSFLLAAGTKGKRYSLPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ G +GQA DI A E+LR+++ + + LS T
Sbjct: 122 MIHQVLGGVQGQATDIDIHAKEILRIKEVLNERLSHHT 159
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L +ER+IF+GQ +D + +N I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ + I+DTM +K V T C+G A + FLLA G KG R ++P SRI +
Sbjct: 63 NSPGGSVSAGMGIFDTMNHVKPDVCTICLGLAASMGAFLLAAGAKGKRMSLPNSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ +T
Sbjct: 123 PLGGAQGQATDIEIQAREILYIKRRLNEILAERT 156
>gi|395326377|gb|EJF58787.1| hypothetical protein DICSQDRAFT_156575, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 257
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 106/181 (58%), Gaps = 8/181 (4%)
Query: 52 YSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
+SG+ + P+ + P V+ +T G G + D+++ L RERVI + I + S
Sbjct: 41 WSGLGHAHPVTANL------VPIVIEQT-GRGERSY-DIFSRLLRERVIMLYGPIRDTDS 92
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
I+A +L+L++ + SK +++YIN PGG VT LAIYDTMQ + SP+ T+CVG A +
Sbjct: 93 ALIVAQLLFLEAEETSKPIHVYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGS 152
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
LLA GEK R A+P S I + P+G A GQA DI A E+LRVR+ + + E
Sbjct: 153 LLLAAGEKSKRHALPHSSIMIHQPSGGASGQASDIAIHAKEILRVREVLTGIYQKHCARE 212
Query: 232 G 232
G
Sbjct: 213 G 213
>gi|417846493|ref|ZP_12492495.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
gi|341952170|gb|EGT78707.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRTALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|255284021|ref|ZP_05348576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bryantella
formatexigens DSM 14469]
gi|255265474|gb|EET58679.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Marvinbryantia formatexigens DSM 14469]
Length = 194
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + +N I+A +L+L+S D +K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSANLIVAQLLFLESEDPAKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V+ AIYDTMQ +K V T C+G A + FLLAGG KG R A+P ++I
Sbjct: 61 QLYINSPGGSVSAGWAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGAKGKRFALPNAQI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI+ A+E+L+ R + + L+ T
Sbjct: 121 MIHQPSGGAKGQASDIKIVAEEILKSRKRLNEYLAANT 158
>gi|145635952|ref|ZP_01791637.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|319897851|ref|YP_004136048.1| ATP-dependent clp protease proteolytic subunit [Haemophilus
influenzae F3031]
gi|378696913|ref|YP_005178871.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|145266785|gb|EDK06804.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|301169432|emb|CBW29032.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|317433357|emb|CBY81736.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3031]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|442805909|ref|YP_007374058.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741759|gb|AGC69448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ ++ GE S+ D+++ L +R+IF+ +++ ++ I+A ML+LD+ D
Sbjct: 1 MPL-IPYVIEQSNRGERSY---DIYSRLLEDRIIFLSDEVNDATASLIVAQMLFLDAKDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + YIN PGG VT LAIYDTMQ +K+ V T CVG A + FLLA G KG R A+P
Sbjct: 57 DKDIQFYINSPGGSVTAGLAIYDTMQHVKADVSTICVGMAASMGAFLLAAGTKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
S I + PAG A+G A DI+ A+ +L+++D + + L+ KT
Sbjct: 117 NSTIMIHQPAGGAKGPATDIKIHAEWILKIKDNLNRILAEKT 158
>gi|413953313|gb|AFW85962.1| hypothetical protein ZEAMMB73_355536 [Zea mays]
Length = 139
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 76/86 (88%)
Query: 145 LAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQAD 204
+A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL RI+L SPAGAARGQAD
Sbjct: 1 MALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQAD 60
Query: 205 DIRNEADELLRVRDYIFKELSRKTDY 230
DI NEA+EL+R+++Y++ +L+ T +
Sbjct: 61 DIENEANELIRIKNYLYGKLAGHTGH 86
>gi|104773729|ref|YP_618709.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116243144|sp|Q1GB31.1|CLPP_LACDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|103422810|emb|CAI97454.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 194
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 107/165 (64%), Gaps = 6/165 (3%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I + +++++ +N I+A +L+LD+ D++K +Y
Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGDVNDQMANSIIAQLLFLDAQDNTKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T +AI DTM +KSPV T G A +A +LA GEKG R A+P + +
Sbjct: 61 MYINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVL 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
+ P G A+GQA +I+ A+E+L+ R I + L++ + D E K
Sbjct: 121 IHQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIK 165
>gi|373467005|ref|ZP_09558311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
gi|371759511|gb|EHO48238.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
Length = 193
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|339021745|ref|ZP_08645737.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
gi|338751241|dbj|GAA09041.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
Length = 234
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 108/161 (67%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ ++ I A +LYL+SV+ +K +
Sbjct: 31 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEI 87
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++SPV T C+G A + LLAGGEKG+R A+P +R+
Sbjct: 88 SFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARV 147
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I++E + +T
Sbjct: 148 MVHQPSGGAQGQASDIEIQAKEILIIRQRLNEIYREHTGQT 188
>gi|87201067|ref|YP_498324.1| ATP-dependent Clp protease proteolytic subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|115311787|sp|Q2G3T3.1|CLPP_NOVAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|87136748|gb|ABD27490.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium aromaticivorans DSM 12444]
Length = 235
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 8/158 (5%)
Query: 60 PIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATML 119
P+ G A++P+ V + GE S+ D+++ L RER+IF+ +++ ++ I+A +L
Sbjct: 23 PVTG--ALIPV---VVEQSSRGERSF---DIYSRLLRERIIFVTGEVEDHMASVIIAQLL 74
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L+S + SK + MYIN PGG VT LAIYDTMQ ++ V T C+G A + FLLA GE
Sbjct: 75 FLESENPSKDISMYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAAGEP 134
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
G R A+P +RI + P+G ARG A DI +A E+LR+R
Sbjct: 135 GMRIALPNARIMIHQPSGGARGMASDIEIQAREILRIR 172
>gi|32490904|ref|NP_871158.1| hypothetical protein WGLp155 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340011|sp|Q8D346.1|CLPP_WIGBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25166110|dbj|BAC24301.1| clpP [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ + GE S+ D+++ L +ER+IF+ I++ +N I+A M++L+S D K ++
Sbjct: 5 PTVVEKNARGERSY---DIFSRLLKERIIFVTGKIEDYMANLIIAQMIFLESEDPEKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT ++IYDTMQ +K V T C+G + +A +LA GEKG R ++P +RI
Sbjct: 62 LYINSPGGVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ++GQA DI E+L+++ + + LS+ T
Sbjct: 122 IHQPLGGSQGQATDIAIHTTEILKIKKCMIELLSKHT 158
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L RER+IF+G +D+ +N I+A +L LDS + K + +YIN PGG
Sbjct: 14 GERSF---DIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIMLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT LAIYDTMQ +++ V T C+G A + FLLA G G R A+P SR+ + P G A+
Sbjct: 71 VTAGLAIYDTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLIHQPLGGAQ 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI +A E+ R++ + + L++ T
Sbjct: 131 GQATDIEIQAAEIGRIKRTLNELLAKHT 158
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + I+DTM ++ + T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 121 HQPLGGAQGQATDIEIQAKEIL 142
>gi|425449262|ref|ZP_18829103.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440753940|ref|ZP_20933142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|389764138|emb|CCI09472.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440174146|gb|ELP53515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 200
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHT 156
>gi|343517775|ref|ZP_08754771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
gi|343394626|gb|EGV07173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDHMANLIVAQLLFLESEDPDKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNDRLAFHT 158
>gi|330994049|ref|ZP_08317979.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347760102|ref|YP_004867663.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
gi|329758995|gb|EGG75509.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347579072|dbj|BAK83293.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 213
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 105/161 (65%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ + + A +LYL+SV+ +K +
Sbjct: 17 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVAAVVSAQLLYLESVNPTKEI 73
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++SPV T C+G A + LLAGGEKG R A+P SR+
Sbjct: 74 SFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRV 133
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I+ E + +T
Sbjct: 134 MVHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYNEHTGRT 174
>gi|390442096|ref|ZP_10230114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|425439844|ref|ZP_18820158.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425471167|ref|ZP_18850027.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|389719848|emb|CCH96383.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389834540|emb|CCI34240.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389882956|emb|CCI36590.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
Length = 200
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHT 156
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4.1|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 105/158 (66%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IF+G+ ++E ++ ++A +L+L+S D +K +
Sbjct: 4 VPYVIEQTSRGERNY---DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +L+ + + + L+ T
Sbjct: 121 MIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANT 158
>gi|422304551|ref|ZP_16391894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425437033|ref|ZP_18817461.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425446784|ref|ZP_18826783.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425455241|ref|ZP_18834961.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462698|ref|ZP_18842165.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443653952|ref|ZP_21131195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
gi|389678071|emb|CCH93046.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389732839|emb|CCI03287.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389790315|emb|CCI13820.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803899|emb|CCI17216.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824204|emb|CCI27015.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443333933|gb|ELS48469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 199
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHT 156
>gi|68249290|ref|YP_248402.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|161350016|ref|NP_438872.3| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae Rd KW20]
gi|260581528|ref|ZP_05849336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
gi|1168977|sp|P43867.1|CLPP_HAEIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81336285|sp|Q4QMK5.1|CLPP_HAEI8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1573716|gb|AAC22371.1| ATP-dependent Clp protease, proteolytic subunit (clpP) [Haemophilus
influenzae Rd KW20]
gi|68057489|gb|AAX87742.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|260091826|gb|EEW75781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
Length = 193
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|357629245|gb|EHJ78139.1| hypothetical protein KGM_01435 [Danaus plexippus]
Length = 211
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L RER+I + I++E S+ ++A +L+L S K V++
Sbjct: 3 PIVVEQT-GRGERAY-DIYSRLLRERIICLMGPINDEISSLVVAQLLFLQSESSKKPVHL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG+VT L IYDTMQ + PV T CVG A +A LLA G G R A+P SRI +
Sbjct: 61 YINSPGGNVTAGLGIYDTMQYITPPVATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G RGQA DI+ +A+E+L+++ I R T
Sbjct: 121 HQPSGGVRGQATDIQIQAEEILKLKSQINNLYVRHT 156
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|375363903|ref|YP_005131942.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384161083|ref|YP_005543156.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|384165974|ref|YP_005547353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|384170169|ref|YP_005551547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|384266990|ref|YP_005422697.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385266358|ref|ZP_10044445.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387900080|ref|YP_006330376.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|394991001|ref|ZP_10383811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|421730139|ref|ZP_16169268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429506759|ref|YP_007187943.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451345383|ref|YP_007444014.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452857085|ref|YP_007498768.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166201799|sp|A7Z939.1|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|341829448|gb|AEK90699.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|371569897|emb|CCF06747.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380500343|emb|CCG51381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385150854|gb|EIF14791.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387174190|gb|AFJ63651.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|393808148|gb|EJD69457.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|407076105|gb|EKE49089.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429488349|gb|AFZ92273.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449849141|gb|AGF26133.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452081345|emb|CCP23112.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 198
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Query: 56 RNDKPIRGR-IAMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R + MPI P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRSEMPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +Y+N PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ T
Sbjct: 124 FLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMAEHT 180
>gi|120599414|ref|YP_963988.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
W3-18-1]
gi|146292590|ref|YP_001183014.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
putrefaciens CN-32]
gi|386313267|ref|YP_006009432.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens 200]
gi|166214710|sp|A4Y5I2.1|CLPP_SHEPC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214712|sp|A1RL89.1|CLPP_SHESW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120559507|gb|ABM25434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
W3-18-1]
gi|145564280|gb|ABP75215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens CN-32]
gi|319425892|gb|ADV53966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens 200]
Length = 202
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSY---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++ + L+ T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHT 166
>gi|333368408|ref|ZP_08460607.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
gi|332977273|gb|EGK14064.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
Length = 240
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A ML+L++ + K +
Sbjct: 46 VPMVVEQSARGERSF---DIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPDKDI 102
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM +K V T C+G AY + FLLA G+KG R A+ SR+
Sbjct: 103 HLYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRV 162
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI A E+L++RD + + L+ +T
Sbjct: 163 MIHQPSGGAQGQATDIEINAREILKIRDRLNRILAERT 200
>gi|171692433|ref|XP_001911141.1| hypothetical protein [Podospora anserina S mat+]
gi|170946165|emb|CAP72966.1| unnamed protein product [Podospora anserina S mat+]
Length = 254
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 90/140 (64%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G W+ D+++ L +ER++ + ID+ S I+A +L+L+S + K + MYIN PGG+V+
Sbjct: 50 GGWRTSDIFSKLLQERIVCLNGAIDDTVSASIVAQLLWLESDNPDKPITMYINSPGGEVS 109
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTM +KSPV T CVG A +A LL GGE G R A+P S I + P G RGQ
Sbjct: 110 SGLAIYDTMTYIKSPVSTVCVGGAASMAAILLIGGEPGKRYALPHSSIMVHQPLGGTRGQ 169
Query: 203 ADDIRNEADELLRVRDYIFK 222
A DI A+++ R+RD I K
Sbjct: 170 ASDILIYANQIQRLRDQINK 189
>gi|449304294|gb|EMD00302.1| hypothetical protein BAUCODRAFT_30779 [Baudoinia compniacensis UAMH
10762]
Length = 255
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G W D+++ L +ER+I + ++E S I+A +L+L++ D SK + +YIN PGG VT
Sbjct: 62 GGWHTYDIFSRLLKERIICLNGEVEETSSASIVAQLLFLEAEDPSKPINLYINSPGGSVT 121
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++SPV T C+G A + LL GG KG+R +P SRI + +G GQ
Sbjct: 122 AGLAIYDTMQYIRSPVTTICMGQAASMGSLLLCGGAKGSRHCLPHSRIMVHQVSGGYHGQ 181
Query: 203 ADDIRNEADELLRVRDYI 220
A DI A E+LRVR+ +
Sbjct: 182 ASDIAIHAKEILRVREQL 199
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 14 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 74 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 133
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++D + L T
Sbjct: 134 QAREILYIKDRLNTMLVEHT 153
>gi|383312831|ref|YP_005365632.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378931491|gb|AFC70000.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 201
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 92/143 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ +++ +N I+A +L+L++ + K +Y+YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYIYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL GGEKG R ++P SRI + P+G +GQA DI
Sbjct: 79 DTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTDYE 231
A E L+++ + + S+ T E
Sbjct: 139 HAQETLKIKRLLNELYSKHTGQE 161
>gi|291463558|pdb|3KTG|A Chain A, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463559|pdb|3KTG|B Chain B, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463560|pdb|3KTG|C Chain C, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463561|pdb|3KTG|D Chain D, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463562|pdb|3KTG|E Chain E, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463563|pdb|3KTG|F Chain F, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463564|pdb|3KTG|G Chain G, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463565|pdb|3KTH|A Chain A, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463566|pdb|3KTH|B Chain B, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463567|pdb|3KTH|C Chain C, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463568|pdb|3KTH|D Chain D, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463569|pdb|3KTH|E Chain E, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463570|pdb|3KTH|F Chain F, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463571|pdb|3KTH|G Chain G, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
Length = 199
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 157
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L R+R++F+GQ + + +N I+A +L+L+S D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ +T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNQHLASRT 156
>gi|424865494|ref|ZP_18289359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
gi|400758762|gb|EJP72964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
Length = 204
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE S+ D+++ L +ERVIF+ ID+ SN ++A +L+L+S + K +
Sbjct: 10 PMVIEQTPRGERSF---DIYSRLLKERVIFLTGPIDDHISNLVVAQLLFLESENPEKDIS 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG ++ LAIYDTMQ + S V T C+G A + LLAGG+KG R A+P SR+
Sbjct: 67 IYINSPGGSISAGLAIYDTMQFISSSVSTMCIGQAASMGALLLAGGDKGKRFALPNSRVM 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA D A E+L ++ + + L++ T
Sbjct: 127 IHQPLGGFQGQASDFEIHAKEILYMKKIVNEILAKHT 163
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 89/132 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A ML+L+S D K +Y+YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +R+ + P G A+GQ+ DI+
Sbjct: 79 DTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARVMIHQPLGGAQGQSTDIQI 138
Query: 209 EADELLRVRDYI 220
+A E+ R+R+ I
Sbjct: 139 QAREIQRIRETI 150
>gi|258542726|ref|YP_003188159.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042647|ref|YP_005481391.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
gi|384051164|ref|YP_005478227.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|384054272|ref|YP_005487366.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|384057506|ref|YP_005490173.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|384060147|ref|YP_005499275.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|384063439|ref|YP_005484081.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|384119449|ref|YP_005502073.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633804|dbj|BAH99779.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01]
gi|256636863|dbj|BAI02832.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|256639916|dbj|BAI05878.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|256642972|dbj|BAI08927.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|256646027|dbj|BAI11975.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|256649080|dbj|BAI15021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|256652067|dbj|BAI18001.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655124|dbj|BAI21051.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
Length = 220
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 53 SGIRNDKPIR-GRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
SG+R+ P+ A++P+ + + GE ++ D+++ L +ER+IF+ + ++ +
Sbjct: 2 SGMRDRDPVEIFSNALVPMVVEQT---SRGERAF---DIYSRLLQERIIFLTGPVYDQVA 55
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ I A +LYL+SV+ +K + YIN PGG V+ LAIYDTMQ ++SPV T C+G A +
Sbjct: 56 SLISAQLLYLESVNPNKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGS 115
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
LLAGGEKG R A+P +R+ + P+G A+GQA DI +A E+L +R + I++E + +T
Sbjct: 116 LLLAGGEKGRRFALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQKLNEIYREHTGRT 175
>gi|225551910|ref|ZP_03772850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia sp.
SV1]
gi|225370908|gb|EEH00338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia sp.
SV1]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D +K +Y
Sbjct: 6 PTVIENT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSNKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 88/132 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R++ +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T C+G A + LL G G R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIHQPLGGAQGQASDIDI 137
Query: 209 EADELLRVRDYI 220
+A E+LR+R YI
Sbjct: 138 QAKEILRLRSYI 149
>gi|421862173|ref|ZP_16293988.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410828304|dbj|GAC44425.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 198
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A ML+L + D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFLGSAIDDDVANSVIAQMLFLQADDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T CVG A + LL G G R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQHIKPDISTICVGLAASMGSLLLTAGAPGKRIALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ P G RGQA DI+ AD +++ R + +K++ R TD + F
Sbjct: 122 IHQPLGGVRGQASDIKIHADWIIKTRQKLNQIYVDRTGQPYKKIERDTDRDYF 174
>gi|329122525|ref|ZP_08251109.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
gi|327473154|gb|EGF18577.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
Length = 211
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 23 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 79
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 80 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 139
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 140 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 176
>gi|116513727|ref|YP_812633.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815344|ref|YP_005851735.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
gi|418029088|ref|ZP_12667636.1| Endopeptidase Clp [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|418035462|ref|ZP_12673919.1| Endopeptidase Clp [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|122275503|sp|Q04BH7.1|CLPP_LACDB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116093042|gb|ABJ58195.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125381|gb|ADY84711.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
gi|354690451|gb|EHE90399.1| Endopeptidase Clp [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|354690806|gb|EHE90748.1| Endopeptidase Clp [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 107/165 (64%), Gaps = 6/165 (3%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I + +++++ +N I+A +L+LD+ D++K +Y
Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGDVNDQMANSIIAQLLFLDAQDNTKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T +AI DTM +KSPV T G A +A +LA GEKG R A+P + +
Sbjct: 61 MYINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVL 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
+ P G A+GQA +I+ A+E+L+ R I + L++ + D E K
Sbjct: 121 IHQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIK 165
>gi|386760068|ref|YP_006233285.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
gi|384933351|gb|AFI30029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
Length = 196
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|352085686|ref|ZP_08953277.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|389798002|ref|ZP_10201030.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
gi|351681627|gb|EHA64751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|388445897|gb|EIM01950.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 65 IAMMPIG----TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATML 119
+AM PI P V+ +T GE S+ D+++ L +ERVIF+ ++++ +N I+A ML
Sbjct: 1 MAMDPIQNLNLVPMVVEQTARGERSY---DIYSRLLKERVIFLVGEVNDQVANLIVAQML 57
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L+S + K + YIN PGG VT LAIYDTMQ +K V T C+G A + FLL G K
Sbjct: 58 FLESENPDKDINFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAK 117
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
G R A+P SR+ + P+G A+GQA DI +A E+L +R+ + K
Sbjct: 118 GKRFALPNSRVMIHQPSGGAQGQATDIEIQAREILYIRERLNK 160
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D+ ++ I+A +LYL++ D+ K + +YIN PGG VT +AIY
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGSVTAGMAIY 103
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG G R A+P SRI + P G A+GQA DI
Sbjct: 104 DTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGAQGQAVDIEI 163
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L + + + L+ T
Sbjct: 164 QAREILYHKQTLNQLLANHT 183
>gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|384177077|ref|YP_005558462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|402777617|ref|YP_006631561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|418031330|ref|ZP_12669815.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|428281042|ref|YP_005562777.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|430758166|ref|YP_007208041.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449095907|ref|YP_007428398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452912837|ref|ZP_21961465.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
gi|3287962|sp|P80244.3|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Stress protein G7
gi|364506085|pdb|3TT7|A Chain A, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506086|pdb|3TT7|B Chain B, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506087|pdb|3TT7|C Chain C, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506088|pdb|3TT7|D Chain D, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506089|pdb|3TT7|E Chain E, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506090|pdb|3TT7|F Chain F, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506091|pdb|3TT7|G Chain G, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis]
gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis]
gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|349596301|gb|AEP92488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|351472389|gb|EHA32502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402482796|gb|AFQ59305.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|407962289|dbj|BAM55529.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|407966303|dbj|BAM59542.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7003]
gi|430022686|gb|AGA23292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449029822|gb|AGE65061.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452117865|gb|EME08259.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
Length = 197
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 158
>gi|193214418|ref|YP_001995617.1| endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
gi|193087895|gb|ACF13170.1| Endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 38 NLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRE 97
N++ F K LYS R + I + M I T G G + D+++ L RE
Sbjct: 3 NINFGFENFAKKELYSS-RTESSINNMLVPMVI-------ETSGRGERAF-DIFSRLLRE 53
Query: 98 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSP 157
R+IF+G ID+ ++ I+A ++YL+S D + ++MYIN PGG V+ L +YDTMQ ++
Sbjct: 54 RIIFLGTPIDDHSASLIMAQLIYLESEDPERDIFMYINSPGGSVSAGLGLYDTMQYIRPD 113
Query: 158 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
V T CVG A + FLLA G G R+++P SRI + P+G A+GQ DI +A E+ ++R
Sbjct: 114 VSTVCVGMAASMGAFLLASGTAGKRASLPHSRIMIHQPSGGAQGQETDIVIQAREIEKIR 173
Query: 218 DYIFKELSRKTDYEGFK 234
+ + ++ T + K
Sbjct: 174 RLLEELFAQHTKQDVVK 190
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|425467657|ref|ZP_18846936.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|389829532|emb|CCI29086.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 200
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNEHLASHT 156
>gi|364506078|pdb|3TT6|A Chain A, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506079|pdb|3TT6|B Chain B, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506080|pdb|3TT6|C Chain C, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506081|pdb|3TT6|D Chain D, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506082|pdb|3TT6|E Chain E, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506083|pdb|3TT6|F Chain F, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506084|pdb|3TT6|G Chain G, Structure Of Clpp From Bacillus Subtilis In Compressed
State
Length = 196
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 157
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L L++ D K +Y
Sbjct: 2 VPTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIY 59
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ L I+DTM ++ V T CVG A + FLL+ G KG R ++P SRI
Sbjct: 60 LYINSPGGSVSAGLGIFDTMNQIQPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIM 119
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ P G A+GQA DI +A E+L Y+ K+L+
Sbjct: 120 IHQPLGGAQGQATDIEIQAKEIL----YLKKQLNH 150
>gi|345023014|ref|ZP_08786627.1| ATP-dependent Clp protease proteolytic subunit [Ornithinibacillus
scapharcae TW25]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAEDSGKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +KS V T C G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKSDVSTICTGMAASMGAFLLAAGAKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A +L++R+ + + LS +T
Sbjct: 122 IHQPLGGTQGQATDIEIHAKRILQMRENLNQILSERT 158
>gi|165971139|gb|AAI58370.1| clpp protein [Xenopus (Silurana) tropicalis]
Length = 228
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 105/167 (62%), Gaps = 3/167 (1%)
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
RG + P+ P V+ +T G G + D+++ L RER+I + ID+ S+ ++A +L+L
Sbjct: 7 RGPPVLSPL-VPIVVEQT-GRGERAY-DIYSRLLRERIICVMGPIDDSLSSLVVAQLLFL 63
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
S + K ++MYIN PGG VT LAIYDTMQ + +P+ T CVG A + LLA G G
Sbjct: 64 QSESNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGM 123
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R ++P SRI + P+G ARGQA DI +A+E+L+++ I + ++ T
Sbjct: 124 RHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHT 170
>gi|242015536|ref|XP_002428409.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
gi|212513021|gb|EEB15671.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
Length = 252
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 16/182 (8%)
Query: 43 FYGRVHK----SLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRER 98
+ + H+ +SG+++ P+ P V+ +T G G + D+++ L +ER
Sbjct: 19 LFSKAHQGFIVKFHSGVKHGVPL----------IPVVIEQT-GRGERAY-DIYSRLLKER 66
Query: 99 VIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPV 158
+I + I +E S+ ++A +L+L S + K V+MYIN PGG VT L IYDTMQ + PV
Sbjct: 67 IICVMGQIHDELSSVVIAQLLFLQSENSKKPVHMYINSPGGSVTAGLGIYDTMQYILPPV 126
Query: 159 GTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 218
T CVG A +A LLA G G R A+P +RI + P+G +GQA DI+ +A+E+L+++
Sbjct: 127 ATWCVGQACSMASLLLAAGASGMRHALPNARIMIHQPSGGVQGQATDIQIQAEEILKLKK 186
Query: 219 YI 220
I
Sbjct: 187 QI 188
>gi|193212075|ref|YP_001998028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
gi|193085552|gb|ACF10828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
Length = 225
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 11/181 (6%)
Query: 49 KSLYSG-IRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNID 107
K LYSG I N I ++ M I T G G + D+++ L RER+IF+G ID
Sbjct: 13 KKLYSGAIENS--INNQLVPMVI-------ETSGRGERAF-DIFSRLLRERIIFLGSPID 62
Query: 108 EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
E + I+A +++L+S D + +Y+Y+N PGG V+ L IYDTMQ ++ + T CVG A
Sbjct: 63 EHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAA 122
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ FLLA G G R+++P SRI + P+G A+GQ DI +A E+ ++R + L++
Sbjct: 123 SMGAFLLASGTAGKRASLPHSRIMIHQPSGGAQGQETDILIQAREIEKIRHLLEDLLAKH 182
Query: 228 T 228
T
Sbjct: 183 T 183
>gi|51598863|ref|YP_073051.1| ATP-dependent Clp protease proteolytic subunit [Borrelia garinii
PBi]
gi|67460252|sp|Q660R2.1|CLPP_BORGA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51573434|gb|AAU07459.1| ATP-dependent Clp protease proteolytic component [Borrelia garinii
PBi]
Length = 194
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D +K +Y
Sbjct: 6 PTVIEHT---GNYERVFDIYSRLLRERIIFLSGEINDLKADTVIAQLLFLESEDSNKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLAYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERT 157
>gi|260913095|ref|ZP_05919577.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
gi|260632682|gb|EEX50851.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
Length = 193
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPEKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T CVG A + FLLAGG G R A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHT 158
>gi|157825907|ref|YP_001493627.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
gi|166214704|sp|A8GNZ4.1|CLPP_RICAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157799865|gb|ABV75119.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
Length = 201
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ +++ +N I+A +L+L++ + K V
Sbjct: 4 VPIVIEQTSRGERAY---DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDV 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTMQ +K V T C+G A + LL GG +G R ++P SRI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGTQGMRYSLPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTDYE 231
+ P+G +GQA DI A E L+++ + + S+ T E
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQE 161
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R++F+GQ +D + +N I+A +L+LD+ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM ++ + T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKRRLNEHLANHT 156
>gi|389795694|ref|ZP_10198808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
gi|388430346|gb|EIL87520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
Length = 209
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++++ +N ++A ML+L+S + K +
Sbjct: 12 VPMVVEQTARGERSY---DIYSRLLKERVIFLVGEVNDQVANLLVAQMLFLESENPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT LAIYDTMQ +K V T C+G A + FLL G KG R A+P SR+
Sbjct: 69 QFYINSPGGAVTAGLAIYDTMQFIKPSVSTMCIGQACSMGSFLLMAGAKGKRYALPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI +A E+L VR+ + K + T
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYVRERLNKLYAEHT 166
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM + V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + L+ T
Sbjct: 121 HQPLGGAQGQASDIEIQAKEILYHKQQLNNYLAEHT 156
>gi|427733872|ref|YP_007053416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427368913|gb|AFY52869.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 201
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L R+R+IF+GQ ID +N I+A ML LD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRDRIIFLGQPIDSNVANLIVAQMLLLDAEDAEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ + T C G A + FLL G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMRHIRPDICTICTGLAASMGAFLLTAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKQQLNQYLAENT 156
>gi|167624686|ref|YP_001674980.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
halifaxensis HAW-EB4]
gi|189082465|sp|B0TLU9.1|CLPP_SHEHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167354708|gb|ABZ77321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
halifaxensis HAW-EB4]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHT 167
>gi|303236896|ref|ZP_07323475.1| Clp protease [Prevotella disiens FB035-09AN]
gi|302483064|gb|EFL46080.1| Clp protease [Prevotella disiens FB035-09AN]
Length = 228
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 89/141 (63%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD K + +YIN PGG VT L I
Sbjct: 52 MDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISIYINSPGGSVTAGLGI 111
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A + LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 112 YDTMQFITSDVATICTGMAASMGAVLLVAGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 171
Query: 208 NEADELLRVRDYIFKELSRKT 228
EA E+L+ + ++ +S +
Sbjct: 172 IEAKEILKFKKELYTIISNHS 192
>gi|114048055|ref|YP_738605.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-7]
gi|123326387|sp|Q0HTK7.1|CLPP_SHESR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113889497|gb|ABI43548.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-7]
Length = 202
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++ + L+ T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHT 166
>gi|380356195|dbj|BAL72617.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ginkgo biloba]
Length = 195
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE N L+RER++F+GQ +D+E +NQ++ M+Y + D++
Sbjct: 1 MPIGVPKVPFRIPGEED-------NRLHRERLLFLGQQVDDEIANQLIGIMMYPNGEDEN 53
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 54 KDIYTYINSPGGTVIPGISLYDAMQFVVPDVHTICMGLAASMGSSVSTGGEITKRIALPH 113
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
+R+ + PA + GQA + EA+E+L++RD I ++T
Sbjct: 114 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRT 155
>gi|291550775|emb|CBL27037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
torques L2-14]
Length = 193
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + FLL+GG+KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +LR + + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKKKLNEILAANT 158
>gi|393218999|gb|EJD04487.1| hypothetical protein FOMMEDRAFT_140424 [Fomitiporia mediterranea
MF3/22]
Length = 202
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L RERV+ + I + S +A +L+L++ D +K ++MYIN PGG
Sbjct: 9 GERSF---DIFSRLLRERVVMLHGPIRDSMSAVAVAQLLFLEAEDATKPIHMYINSPGGS 65
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT LAIYDT+Q + SP+ T+CVG A + LLA GEKG R ++P + I + P+G A
Sbjct: 66 VTAGLAIYDTVQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHSLPHASIMIHQPSGGAS 125
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTDYEG 232
GQA DI A E+LRVR+ + + R EG
Sbjct: 126 GQASDIAIHAREILRVREVLTQIYQRHCAKEG 157
>gi|157693854|ref|YP_001488316.1| ATP-dependent Clp protease proteolytic subunit [Bacillus pumilus
SAFR-032]
gi|389574748|ref|ZP_10164807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
gi|167008647|sp|A8FHN9.1|CLPP_BACP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157682612|gb|ABV63756.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
gi|388425674|gb|EIL83500.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
Length = 198
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + + L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERT 158
>gi|336311088|ref|ZP_08566055.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
HN-41]
gi|335865304|gb|EGM70330.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
HN-41]
Length = 202
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSY---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E++ +++ + L+ T
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEIIGIKNKLNLMLAEHT 166
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K+PV T CVG A + LL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVR 217
+ P G +GQA DI A E+L+++
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILKMK 146
>gi|194015348|ref|ZP_03053964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
gi|194012752|gb|EDW22318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
Length = 198
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + + L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERT 158
>gi|384083495|ref|ZP_09994670.1| ATP-dependent Clp protease, proteolytic subunitclpp [gamma
proteobacterium HIMB30]
Length = 201
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S + K +++YIN PGG
Sbjct: 15 GERSY---DIYSRLLKERVIFMVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGS 71
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P SR+ + P G
Sbjct: 72 VTAGMAIYDTMQFIKPDVSTLCIGQAASMGAFLLAGGAKGKRFALPNSRMMIHQPLGGYS 131
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI A E+L++R+ + +L+ T
Sbjct: 132 GQASDIDIHAKEILKIREKLNSKLAHHT 159
>gi|417844175|ref|ZP_12490236.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
gi|341947560|gb|EGT74207.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
Length = 193
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTIGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA DI+ A E+L+++ + L+ T
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHT 158
>gi|157962502|ref|YP_001502536.1| ATP-dependent Clp protease proteolytic subunit [Shewanella pealeana
ATCC 700345]
gi|189082466|sp|A8H614.1|CLPP_SHEPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157847502|gb|ABV88001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
pealeana ATCC 700345]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHT 167
>gi|373486607|ref|ZP_09577280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
gi|372011468|gb|EHP12063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
Length = 198
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE S+ D+++ L ++ +IF+G ID+ +N I+A ML+L+S D K +
Sbjct: 9 PIVIEETPRGERSY---DIYSRLLKDNIIFLGTAIDDSVANAIVAQMLFLESEDPDKDIQ 65
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ +K+ + T+C+G + LLA G KG R A+P +RI
Sbjct: 66 IYINSPGGSVTAGLAIYDTMQFVKNDIVTYCIGQCASMGAHLLAAGTKGKRFALPNARIM 125
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I E+ R++D + S+ T
Sbjct: 126 IHQPSGGAQGQATEIEITYKEIQRLKDNLAGTFSKHT 162
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
Length = 202
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 110/168 (65%), Gaps = 5/168 (2%)
Query: 62 RGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
+G++ M + P V+ +T GE ++ D+++ L ++R+IF+G+ ++E ++ ++A +L+
Sbjct: 4 KGQVRDMSL-VPYVIEQTSRGERNY---DIYSRLLKDRIIFLGEEVNETTASLVVAQLLF 59
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
L+S D K +++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG KG
Sbjct: 60 LESEDPGKDIHLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGAKG 119
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R A+P + I + P+G A+GQA +I+ A+ +L+ + + + L+ T
Sbjct: 120 KRLALPNAEIMIHQPSGGAKGQATEIQIAAENILKTKKKLNEILAANT 167
>gi|374335521|ref|YP_005092208.1| ATP-dependent Clp protease proteolytic subunit [Oceanimonas sp.
GK1]
gi|372985208|gb|AEY01458.1| ATP-dependent Clp protease proteolytic subunit [Oceanimonas sp.
GK1]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 58 DKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILAT 117
D P+ I M+ T K GE S+ D+++ L +ERVIF+ +++ +N I A
Sbjct: 10 DGPLAALIPMVVEQTAK------GERSY---DIYSRLLKERVIFLTGQVEDHMANLICAQ 60
Query: 118 MLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGG 177
+L+L+S + K +Y+YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG
Sbjct: 61 LLFLESENPEKDIYLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGG 120
Query: 178 EKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
G R A+P SR+ + P G +GQA DI+ A E+L ++D + + L+ T
Sbjct: 121 APGKRFALPNSRVMIHQPLGGFQGQASDIQIHAKEILYIKDKLNRLLAEHT 171
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L++ + K +
Sbjct: 14 VPMVIEQTARGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLEAENPEKDI 70
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K+ V T C+G A + FLLAGG KG R +P +R+
Sbjct: 71 HLYINSPGGSVTAGMAIYDTMQFIKADVSTLCIGQAASMGAFLLAGGAKGKRHCLPNARV 130
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L ++D + + L+ T
Sbjct: 131 MIHQPLGGFQGQASDIEIHAREILFIKDRLNRLLADHT 168
>gi|157374680|ref|YP_001473280.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
sediminis HAW-EB3]
gi|189082467|sp|A8FTH9.1|CLPP_SHESH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157317054|gb|ABV36152.1| Endopeptidase Clp [Shewanella sediminis HAW-EB3]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHT 167
>gi|339442436|ref|YP_004708441.1| hypothetical protein CXIVA_13730 [Clostridium sp. SY8519]
gi|338901837|dbj|BAK47339.1| hypothetical protein CXIVA_13730 [Clostridium sp. SY8519]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I++ +L+L+S D
Sbjct: 1 MPL-VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDASASIIVSQLLFLESEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P
Sbjct: 57 GKDISLYINSPGGSVTAGMAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGAKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ I + P+G ARGQA +I+ A+ +L+++ + LS T
Sbjct: 117 NAEIMIHQPSGGARGQATEIQIVAENILKIKKKLNTILSENT 158
>gi|342731984|ref|YP_004770823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455401|ref|YP_005667995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417962125|ref|ZP_12604399.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|417963799|ref|ZP_12605667.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|417967677|ref|ZP_12608746.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|418016623|ref|ZP_12656188.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372234|ref|ZP_12964326.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329439|dbj|BAK56081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506958|gb|EGX29252.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346983743|dbj|BAK79419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331068|gb|EIA22177.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|380331769|gb|EIA22747.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|380340900|gb|EIA29436.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|380341903|gb|EIA30348.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 103/164 (62%), Gaps = 6/164 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+G +++ ++ ++A +L+L+S
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +++YIN PGG +T +AIYDTMQ +K V T C+G A + FLL+ G KG R A
Sbjct: 55 DTDKDIHLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+P S I + P G RGQA DI A +LR+++ + K LS T
Sbjct: 115 LPNSEIMIHQPLGGFRGQATDIDIHARRILRMKNDLNKILSENT 158
>gi|374301124|ref|YP_005052763.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554060|gb|EGJ51104.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP ++ T G + D+++ L R+R+I +G ID+ + I A +L+L+S D
Sbjct: 1 MPFAQVPIVIETTGRTERAY-DIYSRLLRDRIILLGYPIDDHIAGLICAQLLFLESEDPD 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG VT +AIYDTM + PV T C+G A + FLL+ G KG R ++P
Sbjct: 60 KEIYMYINSPGGSVTAGMAIYDTMGYISCPVSTLCIGQAASMGAFLLSSGTKGMRFSLPN 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
SRI + P G +GQA DI A E+LR+R + + L+ T
Sbjct: 120 SRILIHQPMGGFQGQASDIDIHAREILRMRADLNRILAENT 160
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K +Y+
Sbjct: 6 PYVIEQT-GRGERVY-DIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYL 63
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG +T LAI+DTM +K V T C+G A + LLA G KG R A+P +RI +
Sbjct: 64 YINSPGGVITSGLAIFDTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRFALPNTRIMI 123
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G +GQA DI +A E+LR++ I + L+ +T
Sbjct: 124 HQPLGGFQGQAKDIEIQAKEILRLKSKINEILAERT 159
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 200
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D + +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSSGLGIFDTMNKIQPDVCTVCTGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L ++ + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKSLLNNHLADHT 156
>gi|427724491|ref|YP_007071768.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356211|gb|AFY38934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 218
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 87/130 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER+IF+G ID+ ++ I+A +L+LD+ D K + +Y+N PGG V +AIY
Sbjct: 42 DLYSRLLRERIIFLGSAIDDTVADSIVAQLLFLDAEDAEKDIQIYVNSPGGSVYAGMAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SR+ + P G A+GQA DI
Sbjct: 102 DTMQQIRPDVVTICYGIAASMGAFLLSGGTKGKRMALPSSRVMIHQPLGGAQGQAVDIEI 161
Query: 209 EADELLRVRD 218
+A E+L +++
Sbjct: 162 QAKEILYIKE 171
>gi|386815716|ref|ZP_10102934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
gi|386420292|gb|EIJ34127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
Length = 204
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Query: 70 IGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSK 128
+G P V+ ++ GE ++ D+++ L RERVIF +++ +N I+A +L+L+S + K
Sbjct: 12 VGVPMVIEQSARGERAF---DIYSRLLRERVIFCVGEVEDYMANLIVAQLLFLESENPEK 68
Query: 129 RVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS 188
+++YIN PGG +T +AIYDTMQ +K V T C+G A + LLAGG KG R A+P S
Sbjct: 69 DIHLYINSPGGVITSGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFALPHS 128
Query: 189 RIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R+ + P G RGQA DI A E+L++R+ + + L+ T
Sbjct: 129 RVMIHQPLGGFRGQASDIEIHAREILKMREELNRVLASHT 168
>gi|408409677|ref|ZP_11180959.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sp.
66c]
gi|409350625|ref|ZP_11233673.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
equicursoris CIP 110162]
gi|407876118|emb|CCK82765.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sp.
66c]
gi|407877245|emb|CCK85731.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
equicursoris CIP 110162]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 106/165 (64%), Gaps = 6/165 (3%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I + ++++ +N I+A +L+LD+ D++K +Y
Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGEVNDQMANSIIAQLLFLDAQDNTKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T +AI DTM +KSPV T G A +A +LA GEKG R A+P + +
Sbjct: 61 MYINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVL 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
+ P G A+GQA +I+ A+E+L+ R I + L++ + D E K
Sbjct: 121 IHQPLGGAQGQATEIQIAAEEILKTRKMINELLAKDSGQDIETIK 165
>gi|389774765|ref|ZP_10192884.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
gi|388438364|gb|EIL95119.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
Length = 209
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++++ +N I+A ML+L+S + K +
Sbjct: 12 VPMVVEQTARGERSY---DIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT LAIYDTMQ +K V T C+G A + FLL G KG R A+P SRI
Sbjct: 69 NFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRI 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
+ P+G A+GQA DI +A E+L +R+ + K
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYIRERLNK 160
>gi|206896158|ref|YP_002247153.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
gi|206738775|gb|ACI17853.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE + D+++ L R+R++FI I+ E + ++A +L+L++ D + +Y
Sbjct: 6 PYVIEQTPRGERGY---DIYSRLLRDRIVFINGEIEPEMAGVVIAQLLFLEAEDPKRDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ ++ V T C+G A +A LLA G KG R A+P SRI
Sbjct: 63 VYINSPGGIVTDGLAIYDTMQYIEPDVVTMCIGQAASMAAILLAAGTKGKRFALPNSRIL 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
L P G +GQ D+ +A EL+R++ I + LS T
Sbjct: 123 LHQPMGGVQGQVTDVEIQAKELVRIKQRINEILSVHT 159
>gi|300813057|ref|ZP_07093435.1| Clp protease [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123331|ref|YP_004033590.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|300495898|gb|EFK31042.1| Clp protease [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279894|gb|ADQ60613.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 106/165 (64%), Gaps = 6/165 (3%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I + ++++ +N I+A +L+LD+ D++K +Y
Sbjct: 4 PTVIEQTARGERAY---DIYSRLLKDRIIMLSGEVNDQMANSIIAQLLFLDAQDNTKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T +AI DTM +KSPV T G A +A +LA GEKG R A+P + +
Sbjct: 61 MYINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVL 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT--DYEGFK 234
+ P G A+GQA +I+ A+E+L+ R I + L++ + D E K
Sbjct: 121 IHQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIK 165
>gi|421849601|ref|ZP_16282579.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
NBRC 101655]
gi|421853139|ref|ZP_16285818.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459662|dbj|GAB27782.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
NBRC 101655]
gi|371478599|dbj|GAB31021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 201
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%), Gaps = 3/143 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+ + ++ ++ I A +LYL+SV+ +K + YIN PGG V+ LAIY
Sbjct: 14 DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPGGVVSAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++SPV T C+G A + LLAGGEKG R A+P +R+ + P+G A+GQA DI
Sbjct: 74 DTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGAQGQASDIEI 133
Query: 209 EADELLRVR---DYIFKELSRKT 228
+A E+L +R + I++E + +T
Sbjct: 134 QAREILIIRQKLNEIYREHTGRT 156
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+ I+++ +N ++A ML+L+S + K + +YIN PGG VT +AIY
Sbjct: 19 DIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEKDIQLYINSPGGSVTAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM +K V T C+G A + FLLA GEKG R A+P S I + P G +GQ+ D+
Sbjct: 79 DTMNYIKCDVSTICIGMAASMGAFLLACGEKGKRIALPSSEIMIHQPLGGFQGQSSDVEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A LL+ R+ I K LS++T
Sbjct: 139 HAKRLLKTREDINKILSKRT 158
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE S+ D+++ L ++R++F+G ID++ +N I+A +L+L + D
Sbjct: 1 MSVYVPYVVEQTAQGERSY---DIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +YMYIN PGG + AIYDTMQ +K V T C GFA LL G KG RSA+P
Sbjct: 58 EKDIYMYINSPGGSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGKRSALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
S I + P G A+GQA DI A +L R+ + + +T
Sbjct: 118 NSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERT 159
>gi|345428918|ref|YP_004822034.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus parainfluenzae T3T1]
gi|301154977|emb|CBW14440.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus parainfluenzae T3T1]
Length = 188
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K + +YIN PGG
Sbjct: 9 GERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDINIYINSPGGS 65
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+ + P G R
Sbjct: 66 VTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFR 125
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI+ A E+L+++ + + L+ T
Sbjct: 126 GQASDIQIHAQEILKIKQTLNERLAFHT 153
>gi|226706473|sp|B8CRF7.1|CLPP_SHEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212557511|gb|ACJ29965.1| Peptidase S14, ClpP [Shewanella piezotolerans WP3]
Length = 203
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E+L +++ + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHT 167
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R++F+ ID+ +N ++A +L+L+S D K +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V+ +AIYDTMQ +K V T C+G A +A LLA G G R A+P SR+ + P G A+
Sbjct: 71 VSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGAQ 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA +I A E+LR+R+ + + L++ T
Sbjct: 131 GQATEIEIHAREILRIREEMNQVLAKHT 158
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A ML+L + D K +++YIN PGG +T +AI+
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLL G KG R A+P S I + P G A+GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQPLGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKT 228
A +L++RD + + L+ +T
Sbjct: 139 RARRILKMRDKLNRILAERT 158
>gi|374605361|ref|ZP_09678292.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
gi|374389036|gb|EHQ60427.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N I+A ML+L + D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFLGSAIDDDVANSIIAQMLFLQADDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + LL G G R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ P G RGQA DI+ AD +++ R + ++++ R TD + F
Sbjct: 122 IHQPLGGVRGQASDIKIHADWIIKTRQKLNQIYVDRTGQPYEKIERDTDRDYF 174
>gi|336449969|ref|ZP_08620426.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
gi|336283126|gb|EGN76333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
Length = 211
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +E +IF+ ++E+ +N I+A ML+L+S + K +
Sbjct: 13 VPMVIEQTAKGERSF---DIYSRLLKEGIIFLVGPVEEQMANLIVAQMLFLESENPEKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +++ V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIRNDVSTICIGQAASMGAFLLAGGAKGKRFCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI A E++ ++D + + L+ T
Sbjct: 130 MIHQPLGGFQGQASDIEIHAREIMYIKDKLNRILAEHT 167
>gi|154506030|ref|ZP_02042768.1| hypothetical protein RUMGNA_03572 [Ruminococcus gnavus ATCC 29149]
gi|336433385|ref|ZP_08613205.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
gi|153793529|gb|EDN75949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus gnavus ATCC 29149]
gi|336016316|gb|EGN46103.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D +K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I A+ +LR R + + ++ T
Sbjct: 121 MIHQPSGGAQGQATEISIAAEHILRTRQKLNEIMAANT 158
>gi|118474160|ref|YP_892812.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|424821464|ref|ZP_18246502.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|118413386|gb|ABK81806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
fetus subsp. fetus 82-40]
gi|342328243|gb|EGU24727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 196
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ RT GE S+ D+++ L ++R+I + I++ ++ I+A ML+L++ D K +Y
Sbjct: 6 PYVVERTSKGERSY---DIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +IYDTM +K V T C+G A + FLL+ G KG R A+P SRI
Sbjct: 63 LYINSPGGVVTSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTKGKRYALPNSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G ARGQA DI +A E+LR+++ + L++ T
Sbjct: 123 IHQPLGGARGQATDIEIQAKEILRLKEVLNSTLAKNT 159
>gi|389806651|ref|ZP_10203698.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445303|gb|EIM01383.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
Length = 209
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 65 IAMMPIG----TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATML 119
+AM PI P V+ +T GE S+ D+++ L +ERV+F+ ++++ +N I+A ML
Sbjct: 1 MAMDPIQNLNLVPMVVEQTARGERSY---DIYSRLLKERVVFLVGEVNDQVANLIVAQML 57
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L+S + K + YIN PGG VT LAIYDTMQ +K V T C+G A + FLL G K
Sbjct: 58 FLESENPDKDINFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAK 117
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
G R A+P SR+ + P+G A+GQA DI +A E+L +R+ + K
Sbjct: 118 GKRFALPNSRVMIHQPSGGAQGQATDIEIQAREILYIRERLNK 160
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
+ + P V+ +T GE SW D+++ L ++R++F+G I++ ++ I+A +L+L+S D
Sbjct: 9 LSMNIPFVVEQTHRGERSW---DIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDP 65
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT L IYDTMQ ++ V T+C+G A + FLLAGG KG R A+P
Sbjct: 66 DKDIRLYINSPGGVVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGAKGKRFALP 125
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+RI + P G A GQA DI +A E+LR++ + + ++R +
Sbjct: 126 NARIMIHQPHGGASGQATDIEIQAREILRLKAKLNEIMARHS 167
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 15/174 (8%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++P GE S+ D+++ L RER++F+G ++ ++ ++ I+A +L+L++ D K +
Sbjct: 4 VPMVVEQSPRGERSF---DIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT LAIYDTMQ +K + T C+G A + LLA G G R A+P SRI
Sbjct: 61 TFYINSPGGSVTAGLAIYDTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRD-----------YIFKELSRKTDYEGF 233
+ P G +GQA +I A E+LR+RD + K+L + TD + F
Sbjct: 121 MIHQPMGGYQGQASEIDIHAQEILRMRDDLNKILAYHTGHTVKKLQKDTDRDNF 174
>gi|238026973|ref|YP_002911204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
gi|237876167|gb|ACR28500.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
Length = 217
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL+ G KG R A+P +R
Sbjct: 83 ISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGLAASMGAFLLSSGAKGKRYALPNAR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ + P G ARGQA DI +A E+L +R+ + K L+ T
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILAENT 181
>gi|167761297|ref|ZP_02433424.1| hypothetical protein CLOSCI_03702 [Clostridium scindens ATCC 35704]
gi|167660963|gb|EDS05093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium scindens ATCC 35704]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K + T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGSVTAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +L+ R + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRQKLNQILAENT 158
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G I++ ++ ++A +L+L++ D K +
Sbjct: 4 VPVVVEQTSRGERSY---DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T +AIYDTM +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 QIYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DIR A+ ++++RD + K L +T
Sbjct: 121 MIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERT 158
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 7 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 64 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI A +L++RD++ L+ +T
Sbjct: 124 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERT 160
>gi|357031709|ref|ZP_09093652.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
gi|356414939|gb|EHH68583.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
Length = 204
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 106/161 (65%), Gaps = 7/161 (4%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ S+ I A +LYL+SV+ +K +
Sbjct: 7 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKEI 63
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++ PV T C+G A + LLAGGEK +R A+P +R+
Sbjct: 64 SFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKNHRYALPNARV 123
Query: 191 ALDSPAGAARGQADDIRNEADELLRVR---DYIFKELSRKT 228
+ P+G A+GQA DI +A E+L +R + I++E + +T
Sbjct: 124 MVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQT 164
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K +++YIN PGG VT LAIY
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPGGSVTAGLAIY 84
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G KG R A+P +RI L P G A G D+
Sbjct: 85 DTMQYVKCDVVTICIGQAASMAAVLLASGTKGKRYALPNARIMLHQPLGGAEGPVKDVEI 144
Query: 209 EADELLRVRDYIFKELSRKT 228
ELLR+++ I K LS KT
Sbjct: 145 ITKELLRIKNLINKILSEKT 164
>gi|294507446|ref|YP_003571504.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
gi|294343774|emb|CBH24552.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
Length = 261
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 50 SLYSGIRNDKPIRGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDE 108
S++ G D+P G + PKV+ +T GE ++ D+++ L +ER++FIG I++
Sbjct: 35 SIFQGGLGDQPQSGLV-------PKVVEQTTRGERAY---DIFSRLLKERIVFIGTPIND 84
Query: 109 EFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 168
+ +N +A +LYL+S S+ + +YIN PGG + L +YDTMQ +++P+ T CVG A
Sbjct: 85 QIANLTVAQLLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAAS 144
Query: 169 LAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ LLAGGE G R+ +P SR+ + P G GQA DI +A E+ ++ +++ LS T
Sbjct: 145 MGSVLLAGGEDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHT 204
>gi|224532269|ref|ZP_03672901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
valaisiana VS116]
gi|224511734|gb|EEF82140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
valaisiana VS116]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D SK +Y
Sbjct: 9 PTVIEHT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKDIY 65
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLA G KG R ++ SRI
Sbjct: 66 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLASGAKGKRESLTYSRIM 125
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 126 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 161
>gi|194334636|ref|YP_002016496.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
gi|194312454|gb|ACF46849.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE ++ ++A +++L+S D + +Y+YI
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLESEDPERDIYIYI 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G K R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKDKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P+G A+GQ DI +A E+ ++R + + L++ T
Sbjct: 150 PSGGAQGQETDILIQAREIEKIRKLLDEILAQHT 183
>gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|404490886|ref|YP_006714992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423684010|ref|ZP_17658849.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
gi|67460468|sp|Q65EI5.1|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349895|gb|AAU42529.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|383440784|gb|EID48559.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA +I A +L +RD + K L+ +T
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERT 158
>gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum SS9]
gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease,
proteolytic subunit [Vibrio vulnificus CMCP6]
[Photobacterium profundum SS9]
Length = 207
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 7/169 (4%)
Query: 64 RIAMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATML 119
R AM PI P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L
Sbjct: 6 RNAMSPITDALVPMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLL 62
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG K
Sbjct: 63 FLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAK 122
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
G R +P SR+ + P G +GQA DI+ A E+L ++ + L++ T
Sbjct: 123 GKRYCLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHT 171
>gi|239815493|ref|YP_002944403.1| ATP-dependent Clp protease proteolytic subunit [Variovorax
paradoxus S110]
gi|259491242|sp|C5CJT4.1|CLPP_VARPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239802070|gb|ACS19137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus S110]
Length = 202
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ER+IF+ ++++ +N ++A +L+L+S + K
Sbjct: 9 LGMIPMVIEQSGRGERSY-DIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ YIN PGG V+ +AIYDTMQ +K V T C+GFA + FLLA GEKG R ++P S+
Sbjct: 68 ISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNSK 127
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
I + G ARGQA DI A ++LR +D + + L+ +T
Sbjct: 128 IMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERT 166
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 87/130 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G ID+ ++ ++A +L+LD+ D K + +YIN PGG V +AIY
Sbjct: 21 DIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQLYINSPGGSVYAGMAIY 80
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA DI
Sbjct: 81 DTMQQIRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEI 140
Query: 209 EADELLRVRD 218
+A E+L ++D
Sbjct: 141 QAKEILYIKD 150
>gi|112823618|gb|ABI25707.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
somnus 129PT]
Length = 188
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L++ D +K + +YIN PGG
Sbjct: 9 GERSY---DIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDINIYINSPGGS 65
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+ + P G R
Sbjct: 66 VTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVMIHQPLGGFR 125
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI+ A E+L+++ + + L+ T
Sbjct: 126 GQASDIQIHAQEILKIKQTLNERLAFHT 153
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R++F+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + LS T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKKRLNTLLSEHT 156
>gi|407472866|ref|YP_006787266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
gi|407049374|gb|AFS77419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IFI I++ ++ ++A +L+L+S D K +
Sbjct: 4 VPVVVEQT-GRGERSY-DIYSRLLKDRIIFISDEINDVTASLVVAQLLFLESEDPDKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T AIYDTMQ +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 MYINSPGGSITSGFAIYDTMQYIKPDVSTTCIGMAASMGAFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G RGQA+DI+ A+ +++ R+ + + LS +T
Sbjct: 122 IHQPLGGTRGQAEDIKIHAERIIKTREQLNQILSERT 158
>gi|284047279|ref|YP_003397619.1| endopeptidase Clp [Conexibacter woesei DSM 14684]
gi|283951500|gb|ADB54244.1| Endopeptidase Clp [Conexibacter woesei DSM 14684]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 67 MMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M P+ P V+ ++P GE S+ D+++ L ERVIF+GQ ++++ +N ++A +L+L+SVD
Sbjct: 1 MSPL-VPMVVEQSPRGERSF---DIYSRLLNERVIFLGQEVNDDIANLVVAQLLHLESVD 56
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K + +YIN PGG V+ AIYDTMQ ++ V T CVG A + FLL GG G R ++
Sbjct: 57 ADKDINLYINSPGGSVSAGFAIYDTMQLIRPDVATICVGIAMSMGSFLLCGGASGKRMSL 116
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVR 217
P SRI P+G +GQA DI+ A+E L R
Sbjct: 117 PNSRILNHQPSGGFQGQATDIQIHAEEALAAR 148
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 90/140 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K + +YIN PGG VT LAIY
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A +A LLA G KG R A+P +RI L P G A G D+
Sbjct: 83 DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEI 142
Query: 209 EADELLRVRDYIFKELSRKT 228
ELLR+++ I LS KT
Sbjct: 143 ITKELLRIKNLINTILSEKT 162
>gi|87301613|ref|ZP_01084453.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
gi|87283830|gb|EAQ75784.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
Length = 213
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 60 PIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATML 119
PI P P V+ ++ G G + D+++ L RER+IF+G ID++ ++ ++A +L
Sbjct: 9 PIHNSWQASPGVLPTVVEQS-GRGERAF-DIYSRLLRERIIFLGTGIDDQVADSLVAQLL 66
Query: 120 YLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
+L++ D K + +Y+N PGG VT LAIYDTMQ + V T C G A + FLL+GG K
Sbjct: 67 FLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTK 126
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
G R A+P +RI + P G A+GQA DI +A E+L ++D + ++ T
Sbjct: 127 GKRMALPSARIMIHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMAEHT 175
>gi|343127912|ref|YP_004777843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
bissettii DN127]
gi|342222600|gb|AEL18778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
bissettii DN127]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D +K +Y
Sbjct: 6 PTVIEST---GNYERVFDIYSRLLRERIIFLSGEINDPKADIVIAQLLFLESEDSNKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG KG R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLAYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|343504824|ref|ZP_08742498.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
gi|343510911|ref|ZP_08748102.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|343517340|ref|ZP_08754346.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342793664|gb|EGU29454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342799857|gb|EGU35407.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|342810440|gb|EGU45523.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
Length = 204
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N ++A +L+L+S + K +
Sbjct: 14 VPMVVEQTSRGERSY---DIYSRLLKERIIFLTGQVEDNMANLVVAQLLFLESENPDKDI 70
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C G A + FLLAGG KG R A+P SR+
Sbjct: 71 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTLCTGQACSMGAFLLAGGAKGKRFALPNSRV 130
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G +GQA DI+ A E+L +++ + L+ T
Sbjct: 131 MIHQPLGGFQGQASDIQIHAQEILSIKEKLNNLLAEHT 168
>gi|124013817|sp|Q2S2L8.2|CLPP1_SALRD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 233
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 50 SLYSGIRNDKPIRGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDE 108
S++ G D+P G + PKV+ +T GE ++ D+++ L +ER++FIG I++
Sbjct: 7 SIFQGGLGDQPQSGLV-------PKVVEQTTRGERAY---DIFSRLLKERIVFIGTPIND 56
Query: 109 EFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 168
+ +N +A +LYL+S S+ + +YIN PGG + L +YDTMQ +++P+ T CVG A
Sbjct: 57 QIANLTVAQLLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAAS 116
Query: 169 LAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ LLAGGE G R+ +P SR+ + P G GQA DI +A E+ ++ +++ LS T
Sbjct: 117 MGSVLLAGGEDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHT 176
>gi|343520826|ref|ZP_08757795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343397784|gb|EGV10318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 192
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 104/157 (66%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ ++++ ++ I+A +L+L+S D K +
Sbjct: 5 PMVVEQTNRGERSY---DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL G KG R A+P + I
Sbjct: 62 IYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA+DIR +A ++L+VR + + L+++T
Sbjct: 122 IHQPLGGAQGQAEDIRIQAQKILQVRATLNEILAKRT 158
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM ++ V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELL 214
P G A+GQA DI +A E+L
Sbjct: 121 HQPLGGAQGQATDIEIQAREIL 142
>gi|53719039|ref|YP_108025.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121601387|ref|YP_993274.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
SAVP1]
gi|124386617|ref|YP_001029282.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10229]
gi|126440189|ref|YP_001059356.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 668]
gi|126450257|ref|YP_001080784.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10247]
gi|126451473|ref|YP_001066627.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1106a]
gi|134277993|ref|ZP_01764708.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|217421679|ref|ZP_03453183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|226197408|ref|ZP_03792985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237812684|ref|YP_002897135.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei MSHR346]
gi|238562204|ref|ZP_00440781.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242317499|ref|ZP_04816515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|251766649|ref|ZP_02264557.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254178458|ref|ZP_04885113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|254189184|ref|ZP_04895695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|254206398|ref|ZP_04912750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|254258354|ref|ZP_04949408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|254297312|ref|ZP_04964765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|254358192|ref|ZP_04974465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|386861423|ref|YP_006274372.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403519055|ref|YP_006653189.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
gi|418382821|ref|ZP_12966747.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|418533694|ref|ZP_13099553.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|418540564|ref|ZP_13106094.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|418546808|ref|ZP_13111999.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|418553028|ref|ZP_13117869.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|67460243|sp|Q63V41.1|CLPP_BURPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201803|sp|A3MKJ8.1|CLPP_BURM7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201804|sp|A2SBG3.1|CLPP_BURM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201805|sp|A1V4X1.1|CLPP_BURMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201806|sp|A3NWA6.1|CLPP_BURP0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201807|sp|A3NAI5.1|CLPP_BURP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52209453|emb|CAH35404.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121230197|gb|ABM52715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei SAVP1]
gi|124294637|gb|ABN03906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10229]
gi|126219682|gb|ABN83188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 668]
gi|126225115|gb|ABN88655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106a]
gi|126243127|gb|ABO06220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10247]
gi|134251643|gb|EBA51722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|147753841|gb|EDK60906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|148027319|gb|EDK85340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|157807201|gb|EDO84371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157936863|gb|EDO92533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|160699497|gb|EDP89467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|217395421|gb|EEC35439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|225930787|gb|EEH26797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237504658|gb|ACQ96976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238523066|gb|EEP86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242140738|gb|EES27140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|243065058|gb|EES47244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254217043|gb|EET06427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|385360654|gb|EIF66568.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|385361174|gb|EIF67066.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|385362934|gb|EIF68724.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|385372144|gb|EIF77269.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|385376976|gb|EIF81604.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|385658551|gb|AFI65974.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403074698|gb|AFR16278.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
Length = 217
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P +R
Sbjct: 83 ISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNAR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ + P G ARGQA DI +A E+L +RD + + ++R TD + F
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNF 197
>gi|336422809|ref|ZP_08602950.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336007150|gb|EGN37176.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 103/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K + T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGSVTAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +L+ R + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRQKLNQILAENT 158
>gi|357013904|ref|ZP_09078903.1| ClpP1 [Paenibacillus elgii B69]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 11/156 (7%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I++ +N I+A ML+L + D K + +YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGSPINDVVANSIIAQMLFLAATDPDKDISVYINSPGGSITSGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLLA G KG R A+P S + + P G A GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAEGQASDIEI 138
Query: 209 EADELLRVRDYI-----------FKELSRKTDYEGF 233
A +L++RD + F+ + + TD + F
Sbjct: 139 RAKRILKMRDKLNTILAERTGQSFERIEKDTDRDNF 174
>gi|336436530|ref|ZP_08616242.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007395|gb|EGN37420.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + +N I+A +L+L++ D +K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSANIIVAQLLFLEADDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGSFLLSGGAKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +L++R + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKIRKKLNEILAANT 158
>gi|257455804|ref|ZP_05621030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
gi|257446818|gb|EEV21835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
Length = 224
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERV+F+ +++ +N I+A +L+L++ + K +
Sbjct: 31 VPMVVEQSARGERSF---DIYSRLLRERVVFLAGQVEDHMANLIVAQLLFLEAENPEKDI 87
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM ++ V T C+G AY + FLLA GEKG R A+ +R+
Sbjct: 88 HLYINSPGGSVSAGLAVFDTMNFIQPQVSTICMGGAYSMGSFLLAAGEKGKRYALANARV 147
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA DI A E+L++R+ + K L+ +T
Sbjct: 148 MIHQPSGGAQGQATDIEINAREILKIRERLNKILAERT 185
>gi|254179427|ref|ZP_04886026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
gi|254200063|ref|ZP_04906429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|147749659|gb|EDK56733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|184209967|gb|EDU07010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
Length = 211
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S + K
Sbjct: 18 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKD 76
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P +R
Sbjct: 77 ISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNAR 136
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ + P G ARGQA DI +A E+L +RD + + ++R TD + F
Sbjct: 137 VMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNF 191
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI A +L++RD++ L+ +T
Sbjct: 122 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERT 158
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 7 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 64 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P G A+GQA DI A +L++RD++ L+ +T
Sbjct: 124 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERT 160
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I++ +N ++A ML+L + D K +++YIN PGG +T +AIY
Sbjct: 21 DIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDIHLYINSPGGSITSGMAIY 80
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLLA G G R A+P S + + P G A GQA DI
Sbjct: 81 DTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEVMIHQPLGGAEGQASDIEI 140
Query: 209 EADELLRVRDYIFKELSRKT 228
A +L++RD + K LS +T
Sbjct: 141 RARRILKMRDKLNKILSERT 160
>gi|331003803|ref|ZP_08327295.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
gi|330411995|gb|EGG91392.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTD 229
+ P+G A+GQA +IR A+++L+ ++ + K L+ T+
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTKEKMNKILAENTN 159
>gi|384439472|ref|YP_005654196.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
gi|359290605|gb|AEV16122.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 95/140 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 22 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 81
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P S++ + P G ARG A DI
Sbjct: 82 DTMQFVRAPVSTIVIGLAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGARGTASDIAI 141
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L+ + + + L++ T
Sbjct: 142 QAQEILKAKKLLNEILAKHT 161
>gi|238917377|ref|YP_002930894.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
gi|259585953|sp|C4Z1T6.1|CLPP_EUBE2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238872737|gb|ACR72447.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 14/164 (8%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R+IF+G+ + + +N ++A ML+L++ D SK ++ YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V+ AIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I + P+G AR
Sbjct: 71 VSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGAR 130
Query: 201 GQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
GQ +IR A+ +L+ R+ + +E+SR T+ + +
Sbjct: 131 GQETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNY 174
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ER+IF+ ++++ +N ++A +L+L
Sbjct: 8 AMSPIIDALVPMVVEQTSRGERSY---DIYSRLLKERIIFLTGQVEDQMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG +G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAEGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
R +P SR+ + P G +GQA DI+ A E+L ++ + K L+ T
Sbjct: 125 RHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHT 171
>gi|225568849|ref|ZP_03777874.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
gi|225162348|gb|EEG74967.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAIYDTMQ +KS + T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIKSDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
+ P+G A+GQA +I+ A+ +L+ R + + L+ T
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRQRLNQILAENT 158
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354552381|ref|ZP_08971689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353555703|gb|EHC25091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 229
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++ + L+ T
Sbjct: 162 QAKEILYIKKRLNDMLAEHT 181
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R++F+GQ +D + +N I+A +L+LD+ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT + I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YLNSPGGSVTAGMGIFDTMNHIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 228
P G A+GQA DI +A E+L + + + L+ T
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKRRLNEHLANHT 156
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K + MYIN PGG
Sbjct: 7 GERSY---DIYSRLLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGS 63
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V+ LAIYDTMQ +K V T CVG A + LL G KG R A+P S + + P G AR
Sbjct: 64 VSAGLAIYDTMQHIKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQPLGGAR 123
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKT 228
GQA DI A +L+ R+ + K L+ ++
Sbjct: 124 GQASDIEIHARHILKTRERLNKILAERS 151
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 230
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 90/140 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D+ ++ I+A +L+LD+ D K + +YIN PGG VT +AIY
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 102
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 103 DTMQQIRCDVATICFGLAASMGAFLLAAGAHGKRMSLPNSRIMIHQPLGGAQGQAVDIEI 162
Query: 209 EADELLRVRDYIFKELSRKT 228
+A E+L ++ + + L+ T
Sbjct: 163 QAKEILYLKRKLNEILAYHT 182
>gi|393247505|gb|EJD55012.1| hypothetical protein AURDEDRAFT_77891 [Auricularia delicata
TFB-10046 SS5]
Length = 257
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L RERV+ + ID+ ++ I+A +L+L++ + SK ++
Sbjct: 43 VPIVIEQT-GRGERSY-DIFSRLLRERVVMLNGGIDDAEASLIVAQLLFLEAEESSKPIH 100
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ + +PV T+C+G A + LLA G G R +P +RI
Sbjct: 101 LYINSPGGLVTAGMAIYDTMQYISAPVHTYCIGQAASMGSLLLAAGAPGKRHTLPNARIM 160
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFK 222
+ P+G A GQA DI A E+LRVRD + +
Sbjct: 161 IHQPSGGASGQASDIAIHAKEILRVRDALTR 191
>gi|386854013|ref|YP_006203298.1| ATP-dependent Clp protease proteolytic subunit [Borrelia garinii
BgVir]
gi|365194047|gb|AEW68945.1| ClpP [Borrelia garinii BgVir]
Length = 194
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 73 PKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G+++ V D+++ L RER+IF+ I++ ++ ++A +L+L+S D +K +Y
Sbjct: 6 PTVIEHT---GNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSNKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+Y+N PGG +T LAIYDTMQ +K V T C+G A + FLLAGG +G R ++ SRI
Sbjct: 63 LYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGARGKRESLAYSRIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ P G GQA DI +A+E+LR++ I +S +
Sbjct: 123 IHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQ 158
>gi|53723667|ref|YP_103112.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
ATCC 23344]
gi|76808778|ref|YP_333874.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1710b]
gi|167719122|ref|ZP_02402358.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei DM98]
gi|167738116|ref|ZP_02410890.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 14]
gi|167815308|ref|ZP_02446988.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 91]
gi|167823710|ref|ZP_02455181.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 9]
gi|167845261|ref|ZP_02470769.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei B7210]
gi|167893805|ref|ZP_02481207.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 7894]
gi|167902257|ref|ZP_02489462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910496|ref|ZP_02497587.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 112]
gi|167918525|ref|ZP_02505616.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BCC215]
gi|67460238|sp|Q62JK7.1|CLPP_BURMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|92087004|sp|Q3JRC9.1|CLPP_BURP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52427090|gb|AAU47683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 23344]
gi|76578231|gb|ABA47706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710b]
Length = 207
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S + K
Sbjct: 14 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKD 72
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P +R
Sbjct: 73 ISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNAR 132
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYI-----------FKELSRKTDYEGF 233
+ + P G ARGQA DI +A E+L +RD + + ++R TD + F
Sbjct: 133 VMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNF 187
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,978,708,013
Number of Sequences: 23463169
Number of extensions: 179483179
Number of successful extensions: 350169
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5643
Number of HSP's successfully gapped in prelim test: 598
Number of HSP's that attempted gapping in prelim test: 342898
Number of HSP's gapped (non-prelim): 6302
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)