BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026757
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1
PE=1 SV=1
Length = 230
Score = 259 bits (661), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/182 (67%), Positives = 153/182 (84%), Gaps = 1/182 (0%)
Query: 31 GVLPAVCRRGISLIVKAEHASMASSANSLDKCGRRQMIAVGVIAPWVSLVNQTPPSFAAE 90
GV+P+ ++G+S +VKAEH S +SS++ DKC RR ++ GV+APW+SL+++ P SFAAE
Sbjct: 18 GVIPS-SKKGLSFLVKAEHHSSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAE 76
Query: 91 SNKGFLSVTDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDF 150
S KGFL+V+D KD Y+F+YPFGWQEV+IEGQDKV+KDVIEPLESVSVNL+PT KQ I++F
Sbjct: 77 SKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEF 136
Query: 151 GPPQEVAETLIKKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVG 210
GPP+++AETLIKK LAPP QKT +I ASE+DVDGK YY FEFT QA NY RHALG +TV
Sbjct: 137 GPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVF 196
Query: 211 NG 212
NG
Sbjct: 197 NG 198
>sp|O80634|PPL2_ARATH PsbP-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPL2
PE=1 SV=2
Length = 238
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 46 KAEHASMASSANSLDKCGRRQ-MIAVGVIAPWVSLVNQTPPS---FAAESNKGFLSVTDK 101
KA+ + S + RRQ ++ VG +LV + P+ A E K + D+
Sbjct: 41 KADSSESTYQKGSGNNWKRRQALVGVG------TLVATSIPATLLLAEEIPKSYSPFVDR 94
Query: 102 KDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLI 161
+DGYS+ YP W+E D FKD L++V V IPT K DI + GP +EV L+
Sbjct: 95 EDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLV 154
Query: 162 KKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGNG 212
K A P Q I E DGK YY FE+ + P Y + V VGN
Sbjct: 155 KHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNN 205
>sp|O23403|PPD1_ARATH PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis
thaliana GN=PPD1 PE=1 SV=1
Length = 287
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 54 SSANSLDKCGRRQMIAVGVIAPWVSLVNQT--PPSFAAESNKGFLSVTDKKDGYSFVYPF 111
+ A + GRR+ + +G++ + +V+Q P +FA S F D DGYSF YP
Sbjct: 69 TDAKQVCAVGRRKSMMMGLLMSGL-IVSQANLPTAFA--STPVFREYIDTFDGYSFKYPQ 125
Query: 112 GWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD---IRDFGPPQEVAETLIKKFLAP- 167
W +V G D F+D + E++SV + + D G P+EV + +++++L
Sbjct: 126 NWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEF 185
Query: 168 -------PTQKTKIIAASENDVDGKAYYAFE 191
Q + +S DGK YY E
Sbjct: 186 MSTRLGVKRQANILSTSSRVADDGKLYYQVE 216
>sp|P82537|TL1X_SPIOL Thylakoid lumenal 17 kDa protein (Fragment) OS=Spinacia oleracea
PE=1 SV=1
Length = 30
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 89 AESNKGFLSVTDKKDGYSFVYPFGWQEVII 118
AES KGFL V DKKDGY+F+YPFG QEV I
Sbjct: 1 AESKKGFLPVIDKKDGYTFLYPFGGQEVSI 30
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria
agrestis GN=PSBP PE=2 SV=1
Length = 264
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 43 LIVKAEHASMASSANSLDKCGRRQMI-------AVGV-IAPWVSLVNQTPPSFA-AESNK 93
LI +A+ +S + NS RR + AVG IAP + + F A++N
Sbjct: 36 LICRAQKSS-DTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNT 94
Query: 94 GFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDF 150
FL T DG++ + P W +EV GQ ++D + +VSV + PT K+ I D+
Sbjct: 95 DFLPYTG--DGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDY 152
Query: 151 GPPQEVAETL 160
G P+E T+
Sbjct: 153 GTPEEFLSTV 162
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus
pseudonarcissus GN=PSBP PE=2 SV=1
Length = 265
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 90 ESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD 146
++N F +VT DG+ + P W +EV GQ ++D + +V V + PT K+
Sbjct: 92 KTNTDFQTVTG--DGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKS 149
Query: 147 IRDFGPPQE--------------VAETLIKKFLAPPTQKT-KIIAASENDVDGKAYYAFE 191
I+D+G P++ +T+ + P +T I+ S V GK YY+
Sbjct: 150 IKDYGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIH 209
Query: 192 F---TAQAPNYIRHALGVVTVGNGMKLI 216
TA +H L TV +G I
Sbjct: 210 VLTRTADGDEGGKHLLITATVSDGKLYI 237
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis
sativus GN=PSBP PE=2 SV=1
Length = 263
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 90 ESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD 146
+SN +L + DG+ P W +E GQ ++D + ++SV + PT K+
Sbjct: 90 KSNTDYLPYSG--DGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKS 147
Query: 147 IRDFGPPQEV---AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYY--- 188
I+DFG P+E + L+ K F I+ A+ ++V+GK YY
Sbjct: 148 IKDFGSPEEFLSKVDYLLGKQAYFGKTASEGGFDPDAVATANILEATASNVNGKDYYFVS 207
Query: 189 AFEFTAQAPNYIRHALGVVTVGNGMKLI 216
TA +H L TV +G I
Sbjct: 208 VLTRTADGDEGGKHQLITATVNDGKLYI 235
>sp|Q8VY52|PPD2_ARATH PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis
thaliana GN=PPD2 PE=1 SV=1
Length = 232
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 99 TDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAE 158
TD +G++ + P + +V G + +F+++ ++ V + P + + FG PQ VA+
Sbjct: 79 TDSNNGFTLLIPSSYTKVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVAD 138
Query: 159 TLIK-KFLAPPTQKTKIIAASENDVDGKAYYAFEF 192
LI + T++ ++++ E G+ Y FE+
Sbjct: 139 KLINAEKRKESTKEAEVVSVGERAGLGQQVYEFEY 173
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana
tabacum GN=PSBP3 PE=2 SV=1
Length = 266
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 31 GVLPAVCRRGISLIVKAEHASMASSANSLDKCGRRQMIAVGVIAPWVSLVNQTPPSFAAE 90
G++P++ + L+ +A++ A ++++ + +A+ ++ ++ ++ P+ AA
Sbjct: 24 GIVPSLKSNQL-LVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAY 82
Query: 91 SNKGFL-----SVTD----KKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVN 138
+ + TD DG+ P W +EV GQ F+D + +V V
Sbjct: 83 GEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVA 142
Query: 139 LIPTGKQDIRDFGPPQEV---AETLIKK------------FLAPPTQKTKIIAASENDVD 183
+ PT K+ I DFG P++ + L+ + F + ++ S +V
Sbjct: 143 ITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSTAEVG 202
Query: 184 GKAYYAFEF---TAQAPNYIRHALGVVTVGNGMKLI 216
GK YY TA +H L TV +G I
Sbjct: 203 GKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYI 238
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBP1 PE=1 SV=2
Length = 263
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 22/138 (15%)
Query: 103 DGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV--- 156
DG+ P W +E+ GQ F+D + +++V + PT K+ I D+G P+E
Sbjct: 101 DGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQ 160
Query: 157 AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIR 201
L+ K F I+ +S +V GK YY TA +
Sbjct: 161 VNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGK 220
Query: 202 HALGVVTVGNGMKLITTR 219
H L TV NG KL +
Sbjct: 221 HQLITATV-NGGKLYICK 237
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
tuberosum GN=PSBP PE=2 SV=1
Length = 260
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 103 DGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV--- 156
DG+ P W +E+ GQ ++D + ++ V + PT K+ I D+G P+E
Sbjct: 98 DGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSK 157
Query: 157 AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIR 201
+ L+ K F + ++ AS V GK YY TA +
Sbjct: 158 VDYLLGKQAYFGKTDSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGK 217
Query: 202 HALGVVTVGNGMKLI 216
H L TV +G I
Sbjct: 218 HQLITATVNDGKLYI 232
>sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana
tabacum GN=PSBP2 PE=1 SV=2
Length = 265
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 103 DGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV--- 156
DG+ P W +EV GQ F+D + +V V + PT K+ I DFG P++
Sbjct: 103 DGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQ 162
Query: 157 AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIR 201
+ L+ + F + ++ S +V GK YY TA +
Sbjct: 163 VDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGK 222
Query: 202 HALGVVTVGNGMKLI 216
H L TV +G I
Sbjct: 223 HQLITATVNDGKLYI 237
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
lycopersicum GN=PSBP PE=2 SV=1
Length = 258
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 28/200 (14%)
Query: 43 LIVKAEHASMASSANSLDKCGRRQMIAVGVIAPWVSLVNQTPPSFAA-----ESNKGFLS 97
LI +A+ AS+A + +I I VS + A + N FL
Sbjct: 33 LICRAQKQDDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLP 92
Query: 98 VTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQ 154
DG+ P W +EV GQ ++D + ++ V + PT K+ I D+G P+
Sbjct: 93 YNG--DGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPE 150
Query: 155 EV---AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQA 196
E + L+ K F + ++ AS V GK YY TA
Sbjct: 151 EFLSKVDYLLGKQAYFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVLTRTADG 210
Query: 197 PNYIRHALGVVTVGNGMKLI 216
+H L TV +G I
Sbjct: 211 DEGGKHQLITATVNDGKLYI 230
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana
tabacum GN=PSBP1 PE=3 SV=2
Length = 268
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 24/147 (16%)
Query: 90 ESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD 146
+ N FL+ DG+ P W +EV GQ ++D + ++ V + PT K+
Sbjct: 95 KENTDFLAYNG--DGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKS 152
Query: 147 IRDFGPPQEV---AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFE 191
I D+G P+E + L+ K F + ++ S + V GK YY
Sbjct: 153 ITDYGSPEEFLTQVDFLLGKQAYFGKTDSEGGFESGAVATANLLETSSSTVGGKEYYILS 212
Query: 192 F---TAQAPNYIRHALGVVTVGNGMKL 215
TA +H L TV NG KL
Sbjct: 213 VLTRTADGDEGGKHQLISATV-NGGKL 238
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba
GN=PSBP PE=2 SV=2
Length = 260
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 103 DGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV--- 156
DG+ P W +EV GQ ++D + +++V + PT K+ I D+G P+E
Sbjct: 98 DGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQ 157
Query: 157 AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIR 201
L+ K F I+ + DV GK YY TA +
Sbjct: 158 VNYLLGKQAYFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGK 217
Query: 202 HALGVVTVGNGMKLITTR 219
H L TV NG KL +
Sbjct: 218 HQLITATV-NGGKLYICK 234
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia
oleracea GN=PSBP PE=1 SV=1
Length = 267
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 103 DGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV--- 156
DG+ + P W +E GQ ++D + ++SV + PT K+ I DFG P++
Sbjct: 105 DGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQ 164
Query: 157 AETLIKK------------FLAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIR 201
+ L+ K F + ++ +S VDGK YY+ TA +
Sbjct: 165 VDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGK 224
Query: 202 HALGVVTVGNGMKLI 216
H + TV +G I
Sbjct: 225 HQVIAATVKDGKLYI 239
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment)
OS=Brassica juncea GN=PSBP PE=2 SV=1
Length = 217
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 24/147 (16%)
Query: 90 ESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQD 146
++N F ++ DG+ P W +EV GQ ++D + +++V + PT K+
Sbjct: 44 KTNTDFTAI--NGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKS 101
Query: 147 IRDFGPPQE--------------VAETLIK-KFLAPPTQKTKIIAASENDVDGKAYYAFE 191
I D+G P+E ET + F I+ + DV GK YY
Sbjct: 102 ITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLS 161
Query: 192 F---TAQAPNYIRHALGVVTVGNGMKL 215
TA +H L TV NG KL
Sbjct: 162 VLTRTADEDEGGKHQLITATV-NGGKL 187
>sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum
aestivum GN=PSBP PE=2 SV=1
Length = 258
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 23/145 (15%)
Query: 89 AESNKGFLSVTDKKDGYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQ 145
A+ N F++ + +G+ + P W +E GQ ++D + ++SV + PT K+
Sbjct: 85 AKKNTDFVAYSG--EGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTKK 142
Query: 146 DIRDFGPPQE----VAETLIKK-----------FLAPPTQKTKIIAASENDVDGKAYYAF 190
I D+G P+E V L ++ F + ++ +S VDGK YY+
Sbjct: 143 TITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSI 202
Query: 191 EF---TAQAPNYIRHALGVVTVGNG 212
TA +H L TV +G
Sbjct: 203 TVLTRTADGDEGGKHQLITATVADG 227
>sp|P85189|PSBP_HELAN Oxygen-evolving enhancer protein 2, chloroplastic OS=Helianthus
annuus GN=PSBP PE=1 SV=1
Length = 263
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 21/134 (15%)
Query: 104 GYSFVYPFGW---QEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV---A 157
G+ P W +EV GQ ++D + +++V + PT K+ I D+G P+E
Sbjct: 102 GFKLSVPAKWNPSKEVEYPGQVLRYEDNFDTTSNLAVMVTPTDKKAITDYGAPEEFLSKV 161
Query: 158 ETLIKK------------FLAPPTQKTKIIAASENDVDGKAYY---AFEFTAQAPNYIRH 202
+ L+ K F I+ + VDGK YY TA +H
Sbjct: 162 DYLLGKQAYFGKTASEGGFEQDAVATANILEVATPTVDGKQYYFLSVLTRTADGDEGGKH 221
Query: 203 ALGVVTVGNGMKLI 216
L TV +G I
Sbjct: 222 QLISATVSDGKLYI 235
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum
GN=PSBP PE=1 SV=1
Length = 259
Score = 34.7 bits (78), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 44/235 (18%)
Query: 7 SPSSSIHQTSFLNSLPQ---LGVQKYGGVLPAVCRRGISLIVKAEHASMASSANSLDKCG 63
+P+ ++ Q + + P QK V+ AV R ++L V A++ S
Sbjct: 16 TPTRTLSQRQVVTTKPNHIVCKAQKQDDVVDAVVSRRLALSVLIGAAAVGSK-------- 67
Query: 64 RRQMIAVGVIAPWVSLVNQTPPSFA-AESNKGFLSVTDKKDGYSFVYPFGW---QEVIIE 119
++P + + F A++N +L DG+ + P W +E
Sbjct: 68 ---------VSPADAAYGEAANVFGKAKTNTDYLPYN--GDGFKLLVPAKWNPSKEREFP 116
Query: 120 GQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV---AETLIKK------------F 164
GQ ++D + +VSV + T K+ I D+G P+E + L+ K F
Sbjct: 117 GQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGF 176
Query: 165 LAPPTQKTKIIAASENDVDGKAYYAFEF---TAQAPNYIRHALGVVTVGNGMKLI 216
I+ +S + GK YY TA +H L TV +G I
Sbjct: 177 DTNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYI 231
>sp|Q8FPX6|ILVD1_COREF Dihydroxy-acid dehydratase 1 OS=Corynebacterium efficiens (strain
DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=ilvD1 PE=3 SV=1
Length = 613
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 151 GPPQEVAETLIKKFLA-PPTQKTKIIAASEND-VDGKAYYAFE-------------FTAQ 195
G P E + ++ +A PT I+AS ND VD A E FTA
Sbjct: 145 GGPMEAGKAVVVDGVAHAPTDLITAISASANDGVDDAGLLAVEQSACPTCGSCSGMFTAN 204
Query: 196 APNYIRHALGVVTVGNGMKLIT 217
+ N + ALG+ GNG L T
Sbjct: 205 SMNCLTEALGLSLPGNGSTLAT 226
>sp|Q92WJ0|FBPC1_RHIME Fe(3+) ions import ATP-binding protein FbpC 1 OS=Rhizobium meliloti
(strain 1021) GN=fbpC1 PE=3 SV=1
Length = 353
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 63 GRRQMIAVG---VIAPWVSLVNQTPPSFAAESNKGF---LSVTDKKDGYSFVYPFGWQEV 116
G++Q +AV V+ P V L+++ + A + + ++ G++ VY
Sbjct: 142 GQQQRVAVARALVLEPQVLLLDEPLSNLDARLRRRVRTEIRELQQRLGFTAVY------- 194
Query: 117 IIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIA 176
+ QD+ +VS +I +I GPP+E+ ET F+A + ++A
Sbjct: 195 VTHDQDEAL--------AVSDRIIVMKDGNIAQEGPPRELYETPASAFIADFMGEANVVA 246
Query: 177 ASENDVDG 184
DVDG
Sbjct: 247 CDVIDVDG 254
>sp|P37375|TNPE_STAAU Transposase B from transposon PsiTn554 OS=Staphylococcus aureus
GN=tnpB PE=3 SV=1
Length = 630
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 97 SVTDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEV 156
+ + KDGY F+ + W K+ K+ I P+ V LI + + + P E
Sbjct: 374 CLLEDKDGYYFLKYYQW---------KMKKEHIVPISKEVVLLIKVREDKVSEEFPDSEY 424
Query: 157 AETLIKKFLAPPTQKT-----KIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGN 211
+K +P Q+T +A +N VD K + F A A RH++G T+ N
Sbjct: 425 L--FPRKDGSPLKQETFRGELNKLAYEQNIVD-KLGEIYRFHAHA---FRHSVGTRTINN 478
Query: 212 GM 213
G+
Sbjct: 479 GV 480
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,807,379
Number of Sequences: 539616
Number of extensions: 3469277
Number of successful extensions: 8646
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8631
Number of HSP's gapped (non-prelim): 23
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)