BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026758
MAFASRLASKSKQLCSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFET
ALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTY
LLTLKEIRERRGLIDEHGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLTAELGIRKEDL
PKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEEMVEVKSLDVRNFL

High Scoring Gene Products

Symbol, full name Information P value
MGP1
MALE GAMETOPHYTE DEFECTIVE 1
protein from Arabidopsis thaliana 1.7e-82
Q7DM06
Putative ATP synthase subunit
protein from Glycine max 5.7e-20
LOC535277
Uncharacterized protein
protein from Bos taurus 0.00094

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026758
        (233 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052464 - symbol:MGP1 "MALE GAMETOPHYTE DEFECT...   827  1.7e-82   1
UNIPROTKB|Q7DM06 - symbol:Q7DM06 "Putative ATP synthase s...   237  5.7e-20   1
UNIPROTKB|A6QR15 - symbol:LOC535277 "Uncharacterized prot...   108  0.00094   1


>TAIR|locus:2052464 [details] [associations]
            symbol:MGP1 "MALE GAMETOPHYTE DEFECTIVE 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005753
            "mitochondrial proton-transporting ATP synthase complex"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
            [GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0009555 "pollen
            development" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0005730 GO:GO:0009555 GO:GO:0005753 GO:GO:0008270
            GO:GO:0005507 GO:GO:0050897 GO:GO:0015992 GO:GO:0045263
            EMBL:AC007019 EMBL:AY046020 EMBL:AY079312 EMBL:AY087107
            IPI:IPI00546564 PIR:B84606 RefSeq:NP_179778.1 UniGene:At.24983
            IntAct:Q9SJ12 MINT:MINT-4330244 STRING:Q9SJ12 PaxDb:Q9SJ12
            PRIDE:Q9SJ12 ProMEX:Q9SJ12 EnsemblPlants:AT2G21870.1 GeneID:816723
            KEGG:ath:AT2G21870 GeneFarm:2002 TAIR:At2g21870 eggNOG:NOG259194
            HOGENOM:HOG000238761 InParanoid:Q9SJ12 OMA:LGAEAMM PhylomeDB:Q9SJ12
            ProtClustDB:CLSN2683717 Genevestigator:Q9SJ12 Uniprot:Q9SJ12
        Length = 240

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 168/240 (70%), Positives = 196/240 (81%)

Query:     1 MAFASRLASKSKQLCSSQVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFET 60
             MA+ASR  S+SKQL    VILQ+QHAI VR FA EAA    KGDEMLK +F D+K KF+ 
Sbjct:     1 MAYASRFLSRSKQLQGGLVILQQQHAIPVRAFAKEAARPTFKGDEMLKGVFFDIKNKFQA 60

Query:    61 ALGVLRKEKITIAPEDPAAVSQYANVMKTVREKADLFSESQRIAYTIETRTAGIPDARTY 120
             A+ +LRKEKIT+ PEDPAAV QYANVMKT+R+KAD+FSESQRI + I+T T  IPDAR Y
Sbjct:    61 AVDILRKEKITLDPEDPAAVKQYANVMKTIRQKADMFSESQRIKHDIDTETQDIPDARAY 120

Query:   121 LLTLKEIRERRGLIDEHGAEAMMMDALEKVEKEIKKPLMRNDKKGMALLTAE-------L 173
             LL L+EIR RRGL DE GAEAMM +ALEKVEK+IKKPL+R+DKKGM LL AE       L
Sbjct:   121 LLKLQEIRTRRGLTDELGAEAMMFEALEKVEKDIKKPLLRSDKKGMDLLVAEFEKGNKKL 180

Query:   174 GIRKEDLPKYEEQLELKIAKAQLEELKKDALEAMETQKKREEFKDEEMVEVKSLDVRNFL 233
             GIRKEDLPKYEE LEL +AKAQL+ELK DA+EAME+QKK+EEF+DEEM +VKSLD+RNF+
Sbjct:   181 GIRKEDLPKYEENLELSMAKAQLDELKSDAVEAMESQKKKEEFQDEEMPDVKSLDIRNFI 240


>UNIPROTKB|Q7DM06 [details] [associations]
            symbol:Q7DM06 "Putative ATP synthase subunit" species:3847
            "Glycine max" [GO:0005515 "protein binding" evidence=IPI]
            EMBL:X79057 IntAct:Q7DM06 ProMEX:Q7DM06 Genevestigator:Q7DM06
            Uniprot:Q7DM06
        Length = 64

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 44/60 (73%), Positives = 54/60 (90%)

Query:    18 QVILQRQHAISVRFFANEAAPQALKGDEMLKNIFLDVKKKFETALGVLRKEKITIAPEDP 77
             Q++LQ++HAI VR FA E+AP ALKGDEMLKNIF++VK KFETA+G+L+KEKITI PEDP
Sbjct:     5 QILLQKEHAIPVRHFAKESAPPALKGDEMLKNIFVEVKNKFETAIGILKKEKITIDPEDP 64


>UNIPROTKB|A6QR15 [details] [associations]
            symbol:LOC535277 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0031941 "filamentous actin" evidence=IEA]
            [GO:0030863 "cortical cytoskeleton" evidence=IEA] [GO:0006979
            "response to oxidative stress" evidence=IEA] [GO:0002102 "podosome"
            evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA]
            GO:GO:0006979 GO:GO:0030863 GO:GO:0031941 GO:GO:0001725
            GO:GO:0002102 EMBL:DAAA02019108 InterPro:IPR000533 Pfam:PF00261
            PRINTS:PR00194 PROSITE:PS00326 eggNOG:NOG304012
            HOGENOM:HOG000231521 HOVERGEN:HBG107404 OrthoDB:EOG4TXBSM
            GeneTree:ENSGT00550000074494 CTD:7171 KO:K10375 OMA:EKCKQVE
            EMBL:BC150074 IPI:IPI00727017 RefSeq:NP_001094632.1 UniGene:Bt.9589
            SMR:A6QR15 STRING:A6QR15 Ensembl:ENSBTAT00000005982 GeneID:535277
            KEGG:bta:535277 InParanoid:A6QR15 NextBio:20876681 Uniprot:A6QR15
        Length = 284

 Score = 108 (43.1 bits), Expect = 0.00094, P = 0.00094
 Identities = 40/156 (25%), Positives = 79/156 (50%)

Query:    79 AVSQYANVMKTVREKA-DLFSESQRIAYTIETRTAGIPDARTYLLTLKEIRERRGLIDEH 137
             A+ +   ++K  +E A D   +++      E +   + +  T+L   K+++E    +D++
Sbjct:     3 AIKKKMQMLKLDKENAIDRAEQAESDKKAAEEKCKQVEEELTHLQ--KKLKETEDELDKY 60

Query:   138 GAEAMMMDALEKVEKEIKKPLMRNDKKG-MALLTAELGIRKEDLPKYEEQLELKIAKAQL 196
                  + DA EK+E   KK    +D +G +A L   + + +E+L + +E+L   + K  L
Sbjct:    61 SEN--LKDAQEKLELTEKKA---SDAEGDVAALNRRIQLVEEELDRAQERLATALQK--L 113

Query:   197 EELKKDALEAMETQKKREE--FKDEEMVEVKSLDVR 230
             EE +K A E+    K  E    KDEE +E++ + ++
Sbjct:   114 EEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLK 149


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.337    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      233       233   0.00086  113 3  10 23  0.43    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  194 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.43u 0.14s 39.57t   Elapsed:  00:00:02
  Total cpu time:  39.43u 0.14s 39.57t   Elapsed:  00:00:02
  Start:  Sat May 11 04:41:59 2013   End:  Sat May 11 04:42:01 2013

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