Citrus Sinensis ID: 026761

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
Protein Sequence
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEEccEEEEEccHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccEEccccccccccHHHHHHHHccHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccHHHHHHcccHHcccccccccccccccccccHHHHHHcHccccccccccccEEEcccccccHHHHHHHHHHHcccccccHHHcccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mpgltcnscnrefnddaeqklhyksdwhrynlkrkvagvpgvTEALFLARQAALAQEknknatpmtyscglcgkgyrsSKALAQHLNSRShimrasqgtsneekekviikpiplrdvnkpprkreanneesedsddeweevgpdevLVSEATnsltnlnvgspadddleeddddgafeefdpaccfmcdlphdaiENCMVHMhkchgffipdveylkdpkglltylglkvpsf
Flexible Loop (DISEMBL)
MPGLTCNSCNREFNDDAEQKlhyksdwhrynLKRKVAGVPGVTEALFLARQAALAqeknknatpmTYSCGLCGKGYRSSKALAQHLNSRSHImrasqgtsneekekviikpiplrdvnkpprkreanneesedsddeweeVGPDEVLVSeatnsltnlnvgspaddDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTylglkvpsf
Low Complexity Region (SEG)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEalflarqaalaqEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNeesedsddeweeVGPDEVLVSEATNSLTNLNVGSPadddleeddddgafeefdPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Disordered region (IsUnstruct)
*******************KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQ*****ATPMTYSCGLCGKGY******************************************************************************************************EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLK****
Disordered Region (DISOPRED)
*PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC**********************************************************************************************ADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Disordered Region (DISEMBL)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI************EKVIIKPIPLRDVNK**********************GPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Disordered Region (DISPRO)
*PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGT*****************************************************************************FEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	233	2.2.26 [Sep-21-2011]
Q91VY9	476	Zinc finger protein 622 O	yes	no	0.974	0.476	0.302	4e-22
O59811	463	Zinc finger protein C550.	yes	no	0.948	0.477	0.262	5e-19
Q90Y35	405	Zinc finger protein 622 O	yes	no	0.497	0.286	0.398	1e-14
Q7TM96	386	Zinc finger protein 622 O	yes	no	0.497	0.300	0.390	4e-14
Q969S3	477	Zinc finger protein 622 O	yes	no	0.381	0.186	0.442	9e-14
Q06709	432	Zinc finger protein REH1	yes	no	0.922	0.497	0.258	5e-11
P38344	393	Pre-60S factor REI1 OS=Sa	no	no	0.184	0.109	0.558	1e-07
Q66H85	722	Ankyrin repeat and zinc f	no	no	0.188	0.060	0.409	7e-05
Q9H8Y5	726	Ankyrin repeat and zinc f	no	no	0.158	0.050	0.459	8e-05
Q80UU1	748	Ankyrin repeat and zinc f	no	no	0.188	0.058	0.409	9e-05

>sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=2 SV=1

 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 120/301 (39%), Gaps = 74/301 (24%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR---QAALAQE 57
           M  LTC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT   F  R   Q A+A+ 
Sbjct: 1   MAALTCITCRVAFRDAELQRAHYKTDWHRYNLRRKVAAMAPVTAEGFQERVRAQRAVAEA 60

Query: 58  KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH-------------------------- 91
              +    TY C  CGK + +  A   HL SR H                          
Sbjct: 61  AEASKGAATY-CTACGKKFATFNAYENHLGSRRHAELERKAVRAASRRVELLNAKNLEKG 119

Query: 92  --------------IMRASQGTSNEEKEKVIIKP-------------IPLRD-VNKPPRK 123
                         I +A +   +   +K    P             +P RD   KPPR 
Sbjct: 120 LGADGVDKDAVNAAIQQAIKAQPSTSPKKAPFVPTDECGRAAAGARGVPERDPTEKPPRL 179

Query: 124 REANNEESEDSDDEW--------EEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDG 175
           +    +  + +  +W        EE   DE    E  +S   L    P  +D  +D +D 
Sbjct: 180 QWFEQQAKKLAKQQWEDGEEEGEEEEEDDEDEDWEDIDSDDGLECEDPGVED--QDAEDA 237

Query: 176 AFEEFDPAC------CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLK 229
           A EE  P        C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG K
Sbjct: 238 AAEESPPLGAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEK 297

Query: 230 V 230
           V
Sbjct: 298 V 298

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.
Mus musculus (taxid: 10090)

>sp|O59811|YJVF_SCHPO Zinc finger protein C550.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1

 Score = 94.7 bits (234), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 38/259 (14%)

Query: 3   GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQ--EKNK 60
              C +C   FN+   QK+H+KSDWH YNLKRKVA +P ++  +F  +  ++ +  E+ +
Sbjct: 4   SFACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQ 63

Query: 61  NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKP 120
                  +C +C K + S  A + H+ S+ H    S+   N       IK +   D +  
Sbjct: 64  KKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQRNSR-----IKKLQSEDASSI 118

Query: 121 PRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNV-------------------- 160
                +  E   DS+ E EE    + L S A  SL+NL++                    
Sbjct: 119 ASSTLSMGEPVVDSEIEEEEDLASQ-LTSRAI-SLSNLSLHGRESEPSKTELATSIPQSN 176

Query: 161 ---------GSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIP 211
                      P  +++E +    + +   P  C  C     + + C  HM   H  +IP
Sbjct: 177 EASKSHLFTQEPTPEEIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSLYIP 236

Query: 212 DVEYLKDPKGLLTYLGLKV 230
           + EYL D   L  YL  K+
Sbjct: 237 EREYLVDEPSLFDYLAEKI 255

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 12/128 (9%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR---QAALAQE 57
           M   TC +C   F D   Q+ HYK+DWHRYNLKRKVA +P VT   F  R   Q A+A+E
Sbjct: 1   MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query: 58  KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKP 111
           ++K     TY C +C K + +  A   HL S+ H+    +A Q  S + K   EK + K 
Sbjct: 61  RDK--VTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKG 117

Query: 112 IPLRDVNK 119
           + +  V+K
Sbjct: 118 LAVESVDK 125

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Gallus gallus (taxid: 9031)

>sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=2 SV=2

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 12/128 (9%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR---QAALAQE 57
           M   TC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT   F  R   Q A+A+E
Sbjct: 1   MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query: 58  KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKP 111
           ++K     TY C +C K + +  A   HL SR H+    +A Q  S + +   EK + K 
Sbjct: 61  ESKGTA--TY-CTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEKG 117

Query: 112 IPLRDVNK 119
           + +  VNK
Sbjct: 118 LGVDSVNK 125

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Rattus norvegicus (taxid: 10116)

>sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1

 Score = 77.0 bits (188), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 6/95 (6%)

Query: 1  MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR---QAALAQE 57
          M   TC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT   F  R   Q A+A+E
Sbjct: 1  MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60

Query: 58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI 92
          ++K +   TY C +C K + S  A   HL SR H+
Sbjct: 61 ESKGSA--TY-CTVCSKKFASFNAYENHLKSRRHV 92

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Homo sapiens (taxid: 9606)

>sp|Q06709|REH1_YEAST Zinc finger protein REH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REH1 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 17/232 (7%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNAT 63
            TCN C  +F     Q+ H K++WHRYNLKR++A +P +    F  +     +E+ +N  
Sbjct: 6   FTCNCCVIQFKTSDLQRYHMKTEWHRYNLKRRIANLPPIGAEQFAEKLQISEKEQAENQV 65

Query: 64  PMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRK 123
              +   +       S AL Q         R  +  +N  K K        RD+ K  + 
Sbjct: 66  D-EFGFPVLKPVMNQSNALPQKQKKPIKSKRGRKVGTNLLKRKD-------RDIAKEKQN 117

Query: 124 REANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS-------PADDDLEEDD--DD 174
           R  +   S  S      VG +        ++++     S        +D++L+  D   D
Sbjct: 118 RSVSPSGSISSQLSNLTVGTENTNTDYGEDTVSEYGFTSDSNYEYATSDEELDIADKPSD 177

Query: 175 GAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYL 226
              E+     C  C   +  +E  + HM   HG FIP+  YL D  GLL +L
Sbjct: 178 KENEKITITECIYCGKDNKEVERNVKHMFSEHGLFIPERSYLIDLNGLLEFL 229

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P38344|REI1_YEAST Pre-60S factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REI1 PE=1 SV=3

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 5  TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
          TCNSC   F+   EQ+ H KSDWHRYNLKR+VA +P ++   F
Sbjct: 8  TCNSCVLTFDSSDEQRAHMKSDWHRYNLKRRVAQLPPISFETF 50

Pre-60S-associated cytoplasmic factor invoved in the dissociation and recycling of other late pre-60S factors like ARX1, TIF6 and ALB1 before newly synthesized large ribosomal subunits enter translation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q66H85|ANKZ1_RAT Ankyrin repeat and zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Ankzf1 PE=2 SV=1

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 31/44 (70%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P ++ + F
Sbjct: 70  LFCSACDQVFQNHQEQREHYKLDWHRFNLKQRLKNKPLLSASDF 113

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Rattus norvegicus (taxid: 10116)

>sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVP 40
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P
Sbjct: 72  LFCSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKP 108

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Homo sapiens (taxid: 9606)

>sp|Q80UU1|ANKZ1_MOUSE Ankyrin repeat and zinc finger domain-containing protein 1 OS=Mus musculus GN=Ankzf1 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 31/44 (70%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P ++ + F
Sbjct: 96  LFCSACDQIFQNHQEQREHYKLDWHRFNLKQRLKNKPLLSASDF 139

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
356563786	407	PREDICTED: zinc finger protein 622-like	0.969	0.555	0.719	1e-84
356539178	407	PREDICTED: zinc finger protein 622-like	0.969	0.555	0.719	1e-84
356563788	407	PREDICTED: zinc finger protein 622-like	0.969	0.555	0.715	4e-84
388507466	410	unknown [Lotus japonicus]	0.982	0.558	0.693	6e-84
388508652	410	unknown [Lotus japonicus]	0.982	0.558	0.693	9e-84
302398699	405	C2H2L domain class transcription factor	0.957	0.550	0.727	3e-82
224121192	408	predicted protein [Populus trichocarpa]	0.978	0.558	0.717	1e-81
224143434	407	predicted protein [Populus trichocarpa]	0.991	0.567	0.699	7e-81
255574095	407	transcription factor, putative [Ricinus	0.969	0.555	0.701	6e-80
356539180	407	PREDICTED: zinc finger protein 622-like	0.974	0.557	0.701	7e-78

>gi|356563786|ref|XP_003550140.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/232 (71%), Positives = 191/232 (82%), Gaps = 6/232 (2%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y+CGLCGK Y+SSKA A+HL SR H+MRAS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
           E DP+CCFMCD  H  IENCMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKV
Sbjct: 177 ELDPSCCFMCDQEHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKV 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539178|ref|XP_003538077.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/232 (71%), Positives = 192/232 (82%), Gaps = 6/232 (2%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM YSCGLCGK Y+SSKA A+HL SR H+M+AS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYSCGLCGKDYKSSKAHAEHLKSRGHMMQASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
           E DP+CCFMCD  H +IENCMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKV
Sbjct: 177 ELDPSCCFMCDQEHKSIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKV 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563788|ref|XP_003550141.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 166/232 (71%), Positives = 191/232 (82%), Gaps = 6/232 (2%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN +F DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTKFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y+CGLCGK Y+SSKA A+HL SR H+MRAS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP KRE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPKREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
           E DP+CCFMCD  H  IE+CMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKV
Sbjct: 177 ELDPSCCFMCDQEHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKV 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507466|gb|AFK41799.1| unknown [Lotus japonicus]

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 161/232 (69%), Positives = 186/232 (80%), Gaps = 3/232 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DDA+QKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQAALA+EK+K
Sbjct: 1   MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N T M YSCGLCGKGY+SSKA A+HL SR H+MR S+GTS  + EK I+KP+P R  N+
Sbjct: 61  ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSD-EKAIVKPLPQRSANR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE    E  +S+DEWEEV P++ LV +A  SLT +NV   AD+D + D+DD    E
Sbjct: 120 PPPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFE 179

Query: 180 FD-PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
              PACCFMCD  H+ IENCMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKV
Sbjct: 180 ELDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKV 231

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508652|gb|AFK42392.1| unknown [Lotus japonicus]

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 161/232 (69%), Positives = 186/232 (80%), Gaps = 3/232 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DDA+QKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQAALA+EK+K
Sbjct: 1   MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N T M YSCGLCGKGY+SSKA A+HL SR H+MR S+GTS  + EK I+KP+P R  N+
Sbjct: 61  ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSD-EKAIVKPLPQRSANR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE    E  +S+DEWEEV P++ LV +A  SLT +NV   AD+D + D+DD    E
Sbjct: 120 PPPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFE 179

Query: 180 FD-PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
              PACCFMCD  H+ IENCMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKV
Sbjct: 180 ELDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKV 231

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398699|gb|ADL36644.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 168/231 (72%), Positives = 193/231 (83%), Gaps = 8/231 (3%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M GLTCNSCN+EF DD+EQKLHYKS+WHRYNLKRK+AGVPGVTEALF+ARQAALAQEKN 
Sbjct: 1   MSGLTCNSCNKEFLDDSEQKLHYKSEWHRYNLKRKIAGVPGVTEALFIARQAALAQEKNS 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            + TPM YSCGLCGKGYRSSKA A+HL SRSHI+RASQG S E++EK II+P+P R VNK
Sbjct: 61  LSETPMLYSCGLCGKGYRSSKAHAEHLKSRSHILRASQGAS-EQEEKAIIRPLPPRVVNK 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
            P KREAN+EE+E+S+DEW EV PDE L      SLT++NV   A ++  ++DD   FEE
Sbjct: 120 APPKREANDEETEESEDEWVEVDPDEDL----AKSLTDMNVDEHASEEDMDEDD--DFEE 173

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
            DP CCFMCDL HD +E+CMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKV
Sbjct: 174 LDPTCCFMCDLEHDTLESCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKV 224

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121192|ref|XP_002330766.1| predicted protein [Populus trichocarpa] gi|222872568|gb|EEF09699.1| predicted protein [Populus trichocarpa]

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/230 (71%), Positives = 191/230 (83%), Gaps = 2/230 (0%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN+EF+DDAEQKLHYKS+WHRYNLKRKVAGVPGVTEALF+ARQ+A+A+EK K
Sbjct: 1   MPGLTCNACNKEFDDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFVARQSAIAKEKEK 60

Query: 61  NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKP 120
           N TPM YSC LC KGYRSSKA  QHL SRSHI+RASQGT N+E+E  +IKP+P R+VNK 
Sbjct: 61  NETPMLYSCVLCNKGYRSSKAHDQHLKSRSHILRASQGT-NQEEENTVIKPLPRREVNKR 119

Query: 121 PRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEF 180
             +REA+ +ESE+S+DEWEEV  DE LV+EAT SLT LNV   A  D   +DD+      
Sbjct: 120 VVQREADVKESEESEDEWEEVDSDEELVAEATKSLTGLNVNEMASLDDIVEDDEDD-VLL 178

Query: 181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
           DP+CCF+CD  HD IE+CMVHMHK HGFFIPDVEYLKDP+GLLTYLGLKV
Sbjct: 179 DPSCCFVCDQEHDNIESCMVHMHKQHGFFIPDVEYLKDPQGLLTYLGLKV 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143434|ref|XP_002324955.1| predicted protein [Populus trichocarpa] gi|222866389|gb|EEF03520.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 163/233 (69%), Positives = 189/233 (81%), Gaps = 2/233 (0%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN+EFNDDAEQKLHYKS+WHRYNLKRKVAGVPGVTEALF+ARQ+A+A+EK K
Sbjct: 1   MPGLTCNACNKEFNDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFVARQSAIAKEKEK 60

Query: 61  NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKP 120
           N  PM YSC LC KGY+SSKA  QHL SRSHI+RASQGT N+E+E  +IK +P R+VNK 
Sbjct: 61  NEIPMLYSCVLCNKGYQSSKAHDQHLKSRSHILRASQGT-NQEEENTVIKQLPRREVNKR 119

Query: 121 PRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEF 180
             + EA+  ESE+S+DEWEEVG DE LV+EAT SLT LNV   A   ++  +D+   E  
Sbjct: 120 AVQWEADAGESEESEDEWEEVGSDEELVAEATKSLTGLNVNEMA-SLVDIVEDEEDDELL 178

Query: 181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF 233
           DP+CCFMCD  HD IE+CM HMHK HGFFIPDVEYLKDPKGLLTYLGLKV  +
Sbjct: 179 DPSCCFMCDQEHDNIESCMAHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVKRY 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574095|ref|XP_002527963.1| transcription factor, putative [Ricinus communis] gi|223532589|gb|EEF34375.1| transcription factor, putative [Ricinus communis]

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 162/231 (70%), Positives = 190/231 (82%), Gaps = 5/231 (2%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M GLTCN+CN+EFNDDA+QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQ+ L QEK+K
Sbjct: 1   MGGLTCNACNKEFNDDADQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQSVLVQEKDK 60

Query: 61  NA-TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
           ++ TPM YSC LCGKGYRSSKA AQHL SRSHI+RASQG +NE ++  +IKP+P R +NK
Sbjct: 61  SSETPMLYSCVLCGKGYRSSKAHAQHLKSRSHILRASQG-ANENEDTAVIKPLPRRIMNK 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
            P +R   +EESEDS DEWEEV P+E LV +A+ SLT L+V   +D+D++E +DD     
Sbjct: 120 RPPQRAVEDEESEDSGDEWEEVDPEEELVGDASKSLTGLSVNETSDEDMDEGEDDEL--- 176

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
            DP+CCFMCD  H  +E+CMVHMHK HGFFIPDVEYLKDPK LLTYLGLKV
Sbjct: 177 LDPSCCFMCDQQHGNVESCMVHMHKQHGFFIPDVEYLKDPKSLLTYLGLKV 227

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539180|ref|XP_003538078.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y CGLCGK Y+SSKA A+HL SR H+MRAS+GTS  + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYCCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSQAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++   + ++D  FEE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGEN--VDMEEDDDFEE 177

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
            DP+CCFMCD  H  IE+CMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKV
Sbjct: 178 LDPSCCFMCDQEHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKV 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
TAIR|locus:2128161	405	AT4G31420 [Arabidopsis thalian	0.952	0.548	0.523	1.3e-59
TAIR|locus:2061087	395	FZF [Arabidopsis thaliana (tax	0.502	0.296	0.608	2.9e-58
UNIPROTKB|F1N194	470	ZNF622 "Uncharacterized protei	0.506	0.251	0.357	5.9e-25
UNIPROTKB|F1NNA5	373	ZNF622 "Zinc finger protein 62	0.506	0.316	0.357	5.7e-24
RGD|1309146	386	Zfp622 "zinc finger protein 62	0.506	0.305	0.349	8.2e-24
UNIPROTKB|F1NK03	404	ZNF622 "Zinc finger protein 62	0.506	0.292	0.357	8.9e-24
UNIPROTKB|Q90Y35	405	ZNF622 "Zinc finger protein 62	0.506	0.291	0.357	9e-24
DICTYBASE|DDB_G0290029	402	DDB_G0290029 "C2H2-type zinc f	0.403	0.233	0.382	1.4e-23
UNIPROTKB|F1LQ57	475	Fam134b "Protein FAM134B" [Rat	0.506	0.248	0.349	2.1e-23
MGI|MGI:1289282	476	Zfp622 "zinc finger protein 62	0.377	0.184	0.416	3.5e-23

TAIR|locus:2128161 AT4G31420 [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 122/233 (52%), Positives = 144/233 (61%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEXXXXXXXXXXXXEKNK 60
             MPGLTCN+CN EF D+ E+ LHYKSDWHRYNLKRKVAGVPGVTE            EKNK
Sbjct:     1 MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query:    61 -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTS-NEEKEKVIIKPIPLRDVN 118
              N  PM Y+C +C KGYRSSKA  QHL SRSH++R SQGTS N E++  II+ +P     
Sbjct:    61 SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLP----- 115

Query:   119 KPPRKREANNXXXXXXXXXXXXVGPDEVLVSE-ATNSLTNLNVGSPXXXXXXXXXXXXXX 177
                R+ +               V  DE L +E A++SL+ LNV                 
Sbjct:   116 ---RRVQHRGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADK 172

Query:   178 XXXXPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
                 P CC MCD  H  +E+CM+HMHK HGFFIPD+EYLKDP+GLLTYLGLKV
Sbjct:   173 YELDPTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKV 225

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2061087 FZF [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
 Identities = 73/120 (60%), Positives = 85/120 (70%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEXXXXXXXXXXXXEKNK 60
             M GL CNSCN++F DDAEQK HYKS+WHRYNLKRK+AGVPGVTE            EK K
Sbjct:     1 MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query:    61 NA-TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
                 PM YSCG+C KGYRSSKA  QHL S+SH+++AS  TS  E++K IIK +P R V K
Sbjct:    61 AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKAS--TSTGEEDKAIIKQLPPRRVEK 118

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0051604 "protein maturation" evidence=RCA

UNIPROTKB|F1N194 ZNF622 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 189 (71.6 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
 Identities = 44/123 (35%), Positives = 62/123 (50%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TCN+C     D   Q++HYK+DWHRYNL+RKVAG+  V+ E             + 
Sbjct:     1 MATYTCNTCRAVLEDAEAQRVHYKTDWHRYNLRRKVAGMAPVSLEGFQERVRAQRALAEP 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEE---KEKVIIKPIPLRD 116
             ++    TY C +C K + S KA   HL SR H+    Q  S +     EK + K + +  
Sbjct:    61 ESKGAATY-CTVCSKKFASFKAYENHLRSRRHVELEKQAVSRKVALMNEKNLEKGLGVDS 119

Query:   117 VNK 119
             V+K
Sbjct:   120 VDK 122

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0033674 "positive regulation of kinase activity" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NNA5 ZNF622 "Zinc finger protein 622" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
 Identities = 45/126 (35%), Positives = 63/126 (50%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TC +C   F D   Q+ HYK+DWHRYNLKRKVA +P VT E             + 
Sbjct:     1 MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKPIP 113
             ++    TY C +C K + +  A   HL S+ H+    +A Q  S + K   EK + K + 
Sbjct:    61 RDKVTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKGLA 119

Query:   114 LRDVNK 119
             +  V+K
Sbjct:   120 VESVDK 125

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1309146 Zfp622 "zinc finger protein 622" [Rattus norvegicus (taxid:10116)]

 Score = 176 (67.0 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
 Identities = 44/126 (34%), Positives = 62/126 (49%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT E             + 
Sbjct:     1 MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKPIP 113
             ++    TY C +C K + +  A   HL SR H+    +A Q  S + +   EK + K + 
Sbjct:    61 ESKGTATY-CTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEKGLG 119

Query:   114 LRDVNK 119
             +  VNK
Sbjct:   120 VDSVNK 125

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=ISO

GO:0033674 "positive regulation of kinase activity" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

UNIPROTKB|F1NK03 ZNF622 "Zinc finger protein 622" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 8.9e-24, Sum P(2) = 8.9e-24
 Identities = 45/126 (35%), Positives = 63/126 (50%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TC +C   F D   Q+ HYK+DWHRYNLKRKVA +P VT E             + 
Sbjct:     1 MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKPIP 113
             ++    TY C +C K + +  A   HL S+ H+    +A Q  S + K   EK + K + 
Sbjct:    61 RDKVTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKGLA 119

Query:   114 LRDVNK 119
             +  V+K
Sbjct:   120 VESVDK 125

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q90Y35 ZNF622 "Zinc finger protein 622" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
 Identities = 45/126 (35%), Positives = 63/126 (50%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TC +C   F D   Q+ HYK+DWHRYNLKRKVA +P VT E             + 
Sbjct:     1 MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKPIP 113
             ++    TY C +C K + +  A   HL S+ H+    +A Q  S + K   EK + K + 
Sbjct:    61 RDKVTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKGLA 119

Query:   114 LRDVNK 119
             +  V+K
Sbjct:   120 VESVDK 125

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

DICTYBASE|DDB_G0290029 DDB_G0290029 "C2H2-type zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 187 (70.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
 Identities = 36/94 (38%), Positives = 49/94 (52%)

Query:     5 TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEXXXXXXXXXXXXEKNKNATP 64
             TC SC  +F +  EQ+ HYKS+ HR+NLKRK   +P V E            E++K+ TP
Sbjct:    11 TCISCRIQFENSEEQRDHYKSELHRFNLKRKAFDLPPVNEQTFKNKVEALKQEESKSKTP 70

Query:    65 MTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQG 98
               + C +C K + S     QHL S+ H    S G
Sbjct:    71 AKFECRICDKEFNSDGTYQQHLTSKKHKEMVSSG 104

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1LQ57 Fam134b "Protein FAM134B" [Rattus norvegicus (taxid:10116)]

 Score = 176 (67.0 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
 Identities = 44/126 (34%), Positives = 62/126 (49%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-EXXXXXXXXXXXXEKN 59
             M   TC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT E             + 
Sbjct:     1 MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query:    60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI---MRASQGTSNEEK---EKVIIKPIP 113
             ++    TY C +C K + +  A   HL SR H+    +A Q  S + +   EK + K + 
Sbjct:    61 ESKGTATY-CTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEKGLG 119

Query:   114 LRDVNK 119
             +  VNK
Sbjct:   120 VDSVNK 125

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IEA

GO:0033674 "positive regulation of kinase activity" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

MGI|MGI:1289282 Zfp622 "zinc finger protein 622" [Mus musculus (taxid:10090)]

 Score = 174 (66.3 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
 Identities = 40/96 (41%), Positives = 48/96 (50%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVT-----EXXXXXXXXXXX 55
             M  LTC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT     E           
Sbjct:     1 MAALTCITCRVAFRDAELQRAHYKTDWHRYNLRRKVAAMAPVTAEGFQERVRAQRAVAEA 60

Query:    56 XEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH 91
              E +K A   TY C  CGK + +  A   HL SR H
Sbjct:    61 AEASKGAA--TY-CTACGKKFATFNAYENHLGSRRH 93

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=ISO

GO:0033674 "positive regulation of kinase activity" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0147002801 hypothetical protein (409 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	233
pfam12756	100	pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 cop	2e-15
PTZ00448	373	PTZ00448, PTZ00448, hypothetical protein; Provisio	9e-04

>gnl|CDD|221755 pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 copies)

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 23/47 (48%), Positives = 29/47 (61%)

Query: 184 CCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKV 230
            C  C+   D +E  + HM K HGFFIP+ EYL D +GLL YL  K+
Sbjct: 1   DCLFCNHTSDTVEENLEHMFKSHGFFIPEREYLVDLEGLLNYLREKI 47

This family contains two copies of a C2H2-like zinc finger domain. Length = 100

>gnl|CDD|185627 PTZ00448, PTZ00448, hypothetical protein; Provisional

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQ 51
           L C  CN +  D    K HY+S+WH +N KR    +  ++E  FL  Q
Sbjct: 315 LLCRKCNIQLMDHNAFKQHYRSEWHIFNTKRNARKMEPISEEEFLELQ 362

Length = 373

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	233
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	100.0
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.61
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.41
PTZ00448	373	hypothetical protein; Provisional	99.38
KOG3576	267	consensus Ovo and related transcription factors [T	99.27
KOG3608	467	consensus Zn finger proteins [General function pre	99.27
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.1
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.04
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.68
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.61
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.56
PHA00733	128	hypothetical protein	98.53
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.48
KOG3576	267	consensus Ovo and related transcription factors [T	98.44
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	98.44
KOG2505	591	consensus Ankyrin repeat protein [General function	98.29
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.26
PHA02768	55	hypothetical protein; Provisional	98.15
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	98.13
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	98.12
PHA00733	128	hypothetical protein	98.05
KOG3993	500	consensus Transcription factor (contains Zn finger	98.01
PHA00732	79	hypothetical protein	97.9
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.86
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	97.85
PHA02768	55	hypothetical protein; Provisional	97.74
KOG3608	467	consensus Zn finger proteins [General function pre	97.73
PLN03086	567	PRLI-interacting factor K; Provisional	97.73
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.51
PHA00616	44	hypothetical protein	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.48
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.42
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.37
PLN03086	567	PRLI-interacting factor K; Provisional	97.34
smart00355	26	ZnF_C2H2 zinc finger.	97.1
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.0
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	96.99
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.93
PHA00616	44	hypothetical protein	96.84
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.8
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	96.51
KOG1146	1406	consensus Homeobox protein [General function predi	96.45
KOG3993	500	consensus Transcription factor (contains Zn finger	96.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.86
PHA00732	79	hypothetical protein	95.38
smart00355	26	ZnF_C2H2 zinc finger.	94.89
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.39
PRK04860	160	hypothetical protein; Provisional	94.23
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	94.18
KOG3408	129	consensus U1-like Zn-finger-containing protein, pr	94.03
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.84
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.38
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	92.7
PLN02748	468	tRNA dimethylallyltransferase	91.71
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.79
COG4049	65	Uncharacterized protein containing archaeal-type C	89.98
PF06220	38	zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc fi	89.5
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.33
KOG3408	129	consensus U1-like Zn-finger-containing protein, pr	89.04
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	87.4
COG5236	493	Uncharacterized conserved protein, contains RING Z	87.34
KOG2186	276	consensus Cell growth-regulating nucleolar protein	86.35
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	86.32
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	86.0
COG5112	126	UFD2 U1-like Zn-finger-containing protein [General	83.84
KOG1146	1406	consensus Homeobox protein [General function predi	82.31
COG5236	493	Uncharacterized conserved protein, contains RING Z	81.81
smart00586	49	ZnF_DBF Zinc finger in DBF-like proteins.	80.95

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=2.3e-49  Score=352.37  Aligned_cols=214  Identities=41%  Similarity=0.681  Sum_probs=152.1

Q ss_pred             CCCCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhh--cCCCCccccCCCCCccCC
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK--NATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~--h~~~k~~~C~~C~K~F~s   78 (233)
                      |..|+|++|.+.|.+...||.||+|+|||||||||||++|||+.+.|..++.+.......  ..++.++.|.+|+|+|.+
T Consensus         1 st~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s   80 (390)
T KOG2785|consen    1 STGFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFAS   80 (390)
T ss_pred             CCcceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccC
Confidence            678999999999999999999999999999999999999999999999996555433332  456778999999999999


Q ss_pred             hHHHHHHHhhhhhhhhhhcCCCchhhhhhhccCCCCcCCCCCCCccccCCCCCCCCCcccccCCcchhhhhhhccccccC
Q 026761           79 SKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNL  158 (233)
Q Consensus        79 ~~~l~~H~~s~~hk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  158 (233)
                      .+++.+|++|++|+.+.++.....+.+.+.++..+.+.++    ....    ..+++..|-|.+.++-.      + ...
T Consensus        81 ~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~----~l~~----~~e~e~~~~E~~~~~d~------~-~e~  145 (390)
T KOG2785|consen   81 PKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPS----NLQN----KGESELKWYEVDSDEDS------S-EEE  145 (390)
T ss_pred             hhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCcc----cccc----CCCcccchhhccccccc------c-hhh
Confidence            9999999999999998776544333222332222211110    0110    01233444444332100      0 000


Q ss_pred             CCCCCCCCCCcccCCCCCCCCCCCCcccCCCCCCCCHHHHHHHhhhhcccccCCcccccCHHHHHHHHhccccC
Q 026761          159 NVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPS  232 (233)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~i~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~~ylvDl~GLl~YL~eKI~~  232 (233)
                      +..+  ..++.+++...+. +..|++||||++.+.+++.|++||.+.|||||||++||+|+.|||.|||+||+.
T Consensus       146 ~~dd--~~Edi~~d~~~e~-e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~  216 (390)
T KOG2785|consen  146 EEDD--EEEDIEEDGDDED-ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGI  216 (390)
T ss_pred             ccCc--chhhhhhccchhc-ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhcc
Confidence            0000  0011111111222 334599999999999999999999999999999999999999999999999985

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.61  E-value=3.5e-16  Score=135.34  Aligned_cols=81  Identities=17%  Similarity=0.372  Sum_probs=71.2

Q ss_pred             CCCCcccchhccCCchhhhhhcccc--ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCCh
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD--WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~--~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~   79 (233)
                      +.|.|..|+|+|.+...|++|++++  +|.|++|||.|.-           .=.|+-|.|+|||||||.|..|+|+|+-+
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSR-----------PWLLQGHiRTHTGEKPF~C~hC~kAFADR  228 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSR-----------PWLLQGHIRTHTGEKPFSCPHCGKAFADR  228 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccCCCcccccccccccc-----------hHHhhcccccccCCCCccCCcccchhcch
Confidence            4588999999999999999999996  5999999998653           12578899999999999999999999999


Q ss_pred             HHHHHHHhhhhhhh
Q 026761           80 KALAQHLNSRSHIM   93 (233)
Q Consensus        80 ~~l~~H~~s~~hk~   93 (233)
                      ++|+.|+++|.+.+
T Consensus       229 SNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  229 SNLRAHMQTHSDVK  242 (279)
T ss_pred             HHHHHHHHhhcCCc
Confidence            99999999998754

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.41  E-value=1e-13  Score=120.10  Aligned_cols=77  Identities=19%  Similarity=0.309  Sum_probs=66.9

Q ss_pred             CCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      ++.|..|||+|...=.|+-|+|+    +||.|..|+|.          |+.| ++|+.|+++|.+.|+|+|..|+|+|+.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kA----------FADR-SNLRAHmQTHS~~K~~qC~~C~KsFsl  255 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKA----------FADR-SNLRAHMQTHSDVKKHQCPRCGKSFAL  255 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccch----------hcch-HHHHHHHHhhcCCccccCcchhhHHHH
Confidence            67899999999988766666665    67888888886          6667 999999999999999999999999999


Q ss_pred             hHHHHHHHhhhh
Q 026761           79 SKALAQHLNSRS   90 (233)
Q Consensus        79 ~~~l~~H~~s~~   90 (233)
                      ++.|.+|..+--
T Consensus       256 ~SyLnKH~ES~C  267 (279)
T KOG2462|consen  256 KSYLNKHSESAC  267 (279)
T ss_pred             HHHHHHhhhhcc
Confidence            999999987744

>PTZ00448 hypothetical protein; Provisional

Probab=99.38  E-value=1.1e-13  Score=124.59  Aligned_cols=50  Identities=36%  Similarity=0.663  Sum_probs=47.5

Q ss_pred             CCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHH
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQA   52 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~   52 (233)
                      .|+|++|+.+|.+...||.||||||||||||||++||||++.++|..++.
T Consensus       314 ~~tC~~C~v~F~~~~~qR~H~KSDwHrYNLKRkl~gLppvse~eF~~~i~  363 (373)
T PTZ00448        314 MLLCRKCNIQLMDHNAFKQHYRSEWHIFNTKRNARKMEPISEEEFLELQQ  363 (373)
T ss_pred             CccccccccccCCHHHHHHHhhhhHHHHHHHHHhcCCCCCCHHHHHHHHh
Confidence            58999999999999999999999999999999999999999999997744

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.27  E-value=1.9e-12  Score=107.97  Aligned_cols=75  Identities=24%  Similarity=0.448  Sum_probs=66.7

Q ss_pred             CCCcccchhccCCchhhhhhcccc----ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD----WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~----~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      .|+|..|++.|.-...|.+|++-+    .|-|..|+|-|+.      +|     .|++|.|+|+|.+||+|..|+|+|.+
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfnd------tf-----dlkrh~rthtgvrpykc~~c~kaftq  185 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFND------TF-----DLKRHTRTHTGVRPYKCSLCEKAFTQ  185 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccc------hh-----hhhhhhccccCccccchhhhhHHHHh
Confidence            489999999999999999999874    4889999998665      33     57899999999999999999999999


Q ss_pred             hHHHHHHHhh
Q 026761           79 SKALAQHLNS   88 (233)
Q Consensus        79 ~~~l~~H~~s   88 (233)
                      .-+|..|++.
T Consensus       186 rcsleshl~k  195 (267)
T KOG3576|consen  186 RCSLESHLKK  195 (267)
T ss_pred             hccHHHHHHH
Confidence            9999999874

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.27  E-value=3.1e-12  Score=114.16  Aligned_cols=155  Identities=17%  Similarity=0.287  Sum_probs=113.7

Q ss_pred             CCCCcccchhccCCchhhhhhcccc--ceecCccccccCCCCccHHHHHHHHHHHHHHHhh-cCCCCccccCCCCCccCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD--WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK-NATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~--~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~-h~~~k~~~C~~C~K~F~s   78 (233)
                      .+|.|..|.|.|.+...|+.|+..+  -++|.||.-..++           .+.|.+|++. |...|||+|+.|.+.|.+
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~-----------~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~  304 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSS-----------ASSLTTHIRYRHSKDKPFKCDECDTRCVR  304 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCC-----------hHHHHHHHHhhhccCCCccccchhhhhcc
Confidence            4799999999999999999999885  3889999988777           5789999997 899999999999999999


Q ss_pred             hHHHHHHHhhhhhhhhhhcCCCchhhhhh--hccCCCCcCCCCCCCccccCCCCCCCCCcccccCCcchhhhhhhccccc
Q 026761           79 SKALAQHLNSRSHIMRASQGTSNEEKEKV--IIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLT  156 (233)
Q Consensus        79 ~~~l~~H~~s~~hk~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  156 (233)
                      .+.|.+|+..|.-..-.-...+=.....+  .+...                         +-++.              
T Consensus       305 esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H-------------------------~~evh--------------  345 (467)
T KOG3608|consen  305 ESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRH-------------------------FLEVH--------------  345 (467)
T ss_pred             HHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHH-------------------------HHHhc--------------
Confidence            99999999976611100000000000000  00000                         00000              


Q ss_pred             cCCCCCCCCCCCcccCCCCCCCCCCCCcccCCCCCCCCHHHHHHHhhhhcccccCCc----ccccCHHHHHHH
Q 026761          157 NLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV----EYLKDPKGLLTY  225 (233)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~----~ylvDl~GLl~Y  225 (233)
                                        +.. .-++..|--|++.+.+-..+-.|.++.|||-||--    -|-+|-.|+++-
T Consensus       346 ------------------Eg~-np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~mRL  399 (467)
T KOG3608|consen  346 ------------------EGN-NPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFMRL  399 (467)
T ss_pred             ------------------cCC-CCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCceeee
Confidence                              000 12578999999999999999999999999999986    588999998753

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.10  E-value=2e-11  Score=117.11  Aligned_cols=74  Identities=20%  Similarity=0.417  Sum_probs=65.5

Q ss_pred             CCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      +|-|..|.|+|.-.+.|-+|.-.    .+|.|-+|.|.          |..| -.|..|+|.|+|+|||+|+-|+|.|+.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKA----------FKHK-HHLtEHkRLHSGEKPfQCdKClKRFSH  962 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKA----------FKHK-HHLTEHKRLHSGEKPFQCDKCLKRFSH  962 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHh----------hhhh-hhhhhhhhhccCCCcchhhhhhhhccc
Confidence            59999999999988888777644    57888888775          6666 789999999999999999999999999


Q ss_pred             hHHHHHHHh
Q 026761           79 SKALAQHLN   87 (233)
Q Consensus        79 ~~~l~~H~~   87 (233)
                      ..+|.+||+
T Consensus       963 SGSYSQHMN  971 (1007)
T KOG3623|consen  963 SGSYSQHMN  971 (1007)
T ss_pred             ccchHhhhc
Confidence            999999997

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.04  E-value=5.5e-11  Score=114.07  Aligned_cols=79  Identities=18%  Similarity=0.346  Sum_probs=70.3

Q ss_pred             CCCcccchhccCCchhhhhhcccc-----------------ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD-----------------WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPM   65 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~-----------------~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k   65 (233)
                      -|.|..|..+|..+..|-+||.++                 -|+|..|+|.          |.-| -.|+.|.|+|+|+|
T Consensus       240 nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA----------FKfK-HHLKEHlRIHSGEK  308 (1007)
T KOG3623|consen  240 NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA----------FKFK-HHLKEHLRIHSGEK  308 (1007)
T ss_pred             CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh----------hhhH-HHHHhhheeecCCC
Confidence            488999999999999999999863                 2788888886          4444 68999999999999


Q ss_pred             ccccCCCCCccCChHHHHHHHhhhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRSHI   92 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~hk   92 (233)
                      ||.|+-|+|.|+...+|..|+-|||=.
T Consensus       309 PfeCpnCkKRFSHSGSySSHmSSKKCI  335 (1007)
T KOG3623|consen  309 PFECPNCKKRFSHSGSYSSHMSSKKCI  335 (1007)
T ss_pred             CcCCcccccccccCCcccccccccchh
Confidence            999999999999999999999999876

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.68  E-value=3.7e-09  Score=78.21  Aligned_cols=49  Identities=45%  Similarity=0.842  Sum_probs=0.4

Q ss_pred             cccCCCCCCCCHHHHHHHhhhhcccccCCcccccCHHHHHHHHhccccC
Q 026761          184 CCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPS  232 (233)
Q Consensus       184 ~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~~ylvDl~GLl~YL~eKI~~  232 (233)
                      +|+||+..++++..++.||...|||.||+..+|+|+.+|+.|+..+|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~   49 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKE   49 (100)
T ss_dssp             ------------------------------------------------S
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence            5999999999999999999999999999999999999999999998864

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.61  E-value=1.2e-08  Score=99.58  Aligned_cols=25  Identities=20%  Similarity=0.448  Sum_probs=17.1

Q ss_pred             CcccCCCCCCCCHHHHHHHhhhhcc
Q 026761          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       183 ~~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      ..|--|+..|.+-.++-.||+++-|
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg  904 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTG  904 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCC
Confidence            4577777777777777777776555

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.56  E-value=3.6e-08  Score=56.42  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=23.8

Q ss_pred             HHHHHHhhcCCCCccccCCCCCccCC
Q 026761           53 ALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      +|..|+++|+|++||.|+.|+|+|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999974

...

>PHA00733 hypothetical protein

Probab=98.53  E-value=1.1e-07  Score=75.05  Aligned_cols=75  Identities=15%  Similarity=0.127  Sum_probs=59.6

Q ss_pred             CCCCcccchhccCCchhhhh------hccc---cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKL------HYKS---DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~------H~ks---~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|..|.+.|.++..|+.      |+.+   .+|.|+.|++.+..           ...|..|++.|  ..+|.|.+|
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss-----------~s~L~~H~r~h--~~~~~C~~C  105 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSS-----------SVSLKQHIRYT--EHSKVCPVC  105 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCC-----------HHHHHHHHhcC--CcCccCCCC
Confidence            45789999999988865544      4443   36899999997554           37888998876  357999999


Q ss_pred             CCccCChHHHHHHHhhh
Q 026761           73 GKGYRSSKALAQHLNSR   89 (233)
Q Consensus        73 ~K~F~s~~~l~~H~~s~   89 (233)
                      +|.|....+|..|+..+
T Consensus       106 gK~F~~~~sL~~H~~~~  122 (128)
T PHA00733        106 GKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCccCCHHHHHHHHHHh
Confidence            99999999999998754

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.48  E-value=2.2e-08  Score=97.70  Aligned_cols=57  Identities=19%  Similarity=0.374  Sum_probs=51.1

Q ss_pred             cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhhhhh
Q 026761           26 DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIM   93 (233)
Q Consensus        26 ~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~   93 (233)
                      ..|+|-+|.||+|-           -+.|+.|.|+|||++||+|++||.+|+++.+|+.|...|+-+.
T Consensus       352 ~khkCr~CakvfgS-----------~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGS-----------DSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             ccchhhhhHhhcCc-----------hhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccC
Confidence            35999999999876           5789999999999999999999999999999999998876543

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.44  E-value=8.3e-08  Score=80.43  Aligned_cols=79  Identities=24%  Similarity=0.391  Sum_probs=63.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhh-cC----------CCCc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK-NA----------TPMT   66 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~-h~----------~~k~   66 (233)
                      +.|-|..||+.|.+.-.|++|+++    .+|+||+|.|.          |.++ ..|..|.+. |.          ..+.
T Consensus       144 kr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~ka----------ftqr-csleshl~kvhgv~~~yaykerr~kl  212 (267)
T KOG3576|consen  144 KRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKA----------FTQR-CSLESHLKKVHGVQHQYAYKERRAKL  212 (267)
T ss_pred             HHHHHhhccCcccchhhhhhhhccccCccccchhhhhHH----------HHhh-ccHHHHHHHHcCchHHHHHHHhhhhe
Confidence            346799999999999999999988    57999999996          6666 566666543 32          3467


Q ss_pred             cccCCCCCccCChHHHHHHHhhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      |.|..||.+-.....|..|++.+.-
T Consensus       213 ~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  213 YVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             eeecccCCCCCChhHHHHHHHhcCC
Confidence            9999999999999999999988753

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=98.44  E-value=7e-08  Score=86.14  Aligned_cols=48  Identities=19%  Similarity=0.322  Sum_probs=37.0

Q ss_pred             CcccCCCCCCCCHHHHHHHhhhhcccccCCcccccCHHHHHHHHhccccCC
Q 026761          183 ACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPSF  233 (233)
Q Consensus       183 ~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~~ylvDl~GLl~YL~eKI~~~  233 (233)
                      ..||||.+...++..+.+||...|-|-|--.   +---||-.|...||.+|
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki---~sd~~Ln~YqrvrviNy  327 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKI---QSDYSLNFYQRVRVINY  327 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhh---ccccccchhhhhhHHHH
Confidence            6899999999999999999999999866442   22235666777666654

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.29  E-value=1.7e-07  Score=87.41  Aligned_cols=48  Identities=44%  Similarity=0.799  Sum_probs=44.9

Q ss_pred             CCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHH
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR   50 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k   50 (233)
                      ..+|++|...|.+...||.||++||||.|+||++.++|+++.+.|...
T Consensus        66 ~~~CstCq~~F~s~~eqr~HyksD~HR~N~Krkl~~~~ils~edFe~i  113 (591)
T KOG2505|consen   66 SDQCSTCQIPFGSRQEQREHYKSDWHRFNTKRKLRGKPILSEEDFEGI  113 (591)
T ss_pred             cccccccCCccccHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHh
Confidence            357999999999999999999999999999999999999999999754

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.26  E-value=4.6e-07  Score=66.86  Aligned_cols=78  Identities=24%  Similarity=0.494  Sum_probs=26.1

Q ss_pred             CcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHH
Q 026761            5 TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQ   84 (233)
Q Consensus         5 ~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~   84 (233)
                      .|..|+..|.+...+..||... |..++-... .        +... ..+..+.+. .....+.|..|++.|.+...|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~-H~~~~~~~~-~--------l~~~-~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKK-HGFDIPDQK-Y--------LVDP-NRLLNYLRK-KVKESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccccccccccccccccccc-ccccccccc-c--------cccc-ccccccccc-ccCCCCCCCccCCCCcCHHHHHH
Confidence            4999999999999999999874 544332110 0        1111 122222221 12236999999999999999999


Q ss_pred             HHhhhhhhhh
Q 026761           85 HLNSRSHIMR   94 (233)
Q Consensus        85 H~~s~~hk~~   94 (233)
                      |++++.|+.+
T Consensus        69 Hm~~~~H~~~   78 (100)
T PF12756_consen   69 HMRSKHHKKR   78 (100)
T ss_dssp             HHHHTTTTC-
T ss_pred             HHcCccCCCc
Confidence            9999999774

>PHA02768 hypothetical protein; Provisional

Probab=98.15  E-value=1.1e-06  Score=58.90  Aligned_cols=26  Identities=8%  Similarity=0.034  Sum_probs=16.9

Q ss_pred             HHHHhhcCCCCccccCCCCCccCChHHH
Q 026761           55 AQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (233)
Q Consensus        55 ~~h~~~h~~~k~~~C~~C~K~F~s~~~l   82 (233)
                      ..|+++|+  ++|+|..|+|.|...+.|
T Consensus        22 ~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768         22 ITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             HHHHHhcC--CcccCCcccceeccccee
Confidence            33344444  577888888888876654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=98.13  E-value=7.9e-07  Score=51.12  Aligned_cols=26  Identities=35%  Similarity=0.732  Sum_probs=25.0

Q ss_pred             cccCCCCCccCChHHHHHHHhhhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSHI   92 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~hk   92 (233)
                      |.|.+|+|.|.+...|.+|++|++||
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk~Hk   27 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSKKHK   27 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSHHHH
T ss_pred             CCcccCCCCcCCHHHHHHHHccCCCC
Confidence            78999999999999999999999996

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=98.12  E-value=1.5e-06  Score=48.83  Aligned_cols=25  Identities=40%  Similarity=0.929  Sum_probs=24.1

Q ss_pred             cccCCCCCccCChHHHHHHHhhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      |.|.+|++.|++...|..|+++++|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~H   25 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKKH   25 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCCC
Confidence            6799999999999999999999998

>PHA00733 hypothetical protein

Probab=98.05  E-value=5.9e-06  Score=65.18  Aligned_cols=27  Identities=19%  Similarity=0.407  Sum_probs=24.5

Q ss_pred             CcccCCCCCCCCHHHHHHHhhhhcccc
Q 026761          183 ACCFMCDLPHDAIENCMVHMHKCHGFF  209 (233)
Q Consensus       183 ~~ClfC~~~~~~~~~~~~HM~~~h~ff  209 (233)
                      ..|-.|+..+.....+..||.+.|+.-
T Consensus       100 ~~C~~CgK~F~~~~sL~~H~~~~h~~~  126 (128)
T PHA00733        100 KVCPVCGKEFRNTDSTLDHVCKKHNIC  126 (128)
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCcc
Confidence            469999999999999999999999853

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.01  E-value=1.7e-06  Score=79.31  Aligned_cols=29  Identities=28%  Similarity=0.537  Sum_probs=25.9

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhhhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRSHIMR   94 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~hk~~   94 (233)
                      -|.|.+|+|+|+++..|+.|+.+|.-...
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhcccc
Confidence            59999999999999999999999876654

>PHA00732 hypothetical protein

Probab=97.90  E-value=6.1e-06  Score=59.73  Aligned_cols=48  Identities=27%  Similarity=0.462  Sum_probs=33.9

Q ss_pred             CCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHH
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l   82 (233)
                      ||.|..|++.|.+...|+.|++..                                  |+   ++.|..|||+|.   .+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~----------------------------------H~---~~~C~~CgKsF~---~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRN----------------------------------HT---LTKCPVCNKSYR---RL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcc----------------------------------cC---CCccCCCCCEeC---Ch
Confidence            578888888888777777776531                                  22   246999999997   36


Q ss_pred             HHHHhhhh
Q 026761           83 AQHLNSRS   90 (233)
Q Consensus        83 ~~H~~s~~   90 (233)
                      ..|.+++.
T Consensus        41 ~~H~~~~~   48 (79)
T PHA00732         41 NQHFYSQY   48 (79)
T ss_pred             hhhhcccC
Confidence            77876654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.86  E-value=9.2e-06  Score=44.56  Aligned_cols=23  Identities=35%  Similarity=0.925  Sum_probs=21.5

Q ss_pred             cccCCCCCccCChHHHHHHHhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |.|..|++.|.++..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00451 ZnF_U1 U1-like zinc finger

Probab=97.85  E-value=1.4e-05  Score=48.35  Aligned_cols=31  Identities=19%  Similarity=0.525  Sum_probs=28.4

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      +|.|.+|++.|.+..++.+|+++++|+.+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk~H~~~~~   33 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGKKHKKNVK   33 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChHHHHHHHH
Confidence            5889999999999999999999999998654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PHA02768 hypothetical protein; Provisional

Probab=97.74  E-value=1.1e-05  Score=54.11  Aligned_cols=36  Identities=11%  Similarity=0.275  Sum_probs=31.8

Q ss_pred             CCCcccchhccCCchhhhhhccccc--eecCccccccC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDW--HRYNLKRKVAG   38 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~--hryNlkrkv~~   38 (233)
                      .|.|..||+.|...++|..|+++++  ++|-.|+|++.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~   42 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISL   42 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceec
Confidence            5899999999999999999999976  67788888754

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.73  E-value=2.5e-05  Score=70.43  Aligned_cols=85  Identities=14%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             CCcccchhccCCchhhhhhccc-----cceecCcccccc-------------CCCCccHHH------HHHHHHHHHHHHh
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS-----DWHRYNLKRKVA-------------GVPGVTEAL------FLARQAALAQEKN   59 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks-----~~hryNlkrkv~-------------~l~p~~~~~------F~~k~~~l~~h~~   59 (233)
                      |+|..|..+...++.|+.|++.     ++++|.-|.+.+             ..+.+.|+.      |... .++.+|.+
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~-~q~~~H~~  342 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTY-TQMRRHFL  342 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHH-HHHHHHHH
Confidence            5555555555555555555543     345555554321             122223322      2222 56778877


Q ss_pred             h-cCC--CCccccCCCCCccCChHHHHHHHhhh
Q 026761           60 K-NAT--PMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        60 ~-h~~--~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      . |.|  +.+|.|-.|.|.|.+-++|..|++.+
T Consensus       343 evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kk  375 (467)
T KOG3608|consen  343 EVHEGNNPILYACHCCDRFFTSGKSLSAHLMKK  375 (467)
T ss_pred             HhccCCCCCceeeecchhhhccchhHHHHHHHh
Confidence            6 544  45799999999999999999999754

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.73  E-value=3.3e-05  Score=74.30  Aligned_cols=61  Identities=18%  Similarity=0.394  Sum_probs=41.9

Q ss_pred             CCCcccchhccCCchhhhhhccc--cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS--DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks--~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      .+.|..|+..|. ...+..|++.  .++.|. |++.+           .+ ..|..|+++|...+++.|..|++.|.
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-----------~R-~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-----------EK-EQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-----------ch-hHHHhhhhccCCCCceeCCCCCCccc
Confidence            467888888885 4567777775  334566 65431           22 57778888788888888888888874

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.51  E-value=4.8e-05  Score=43.31  Aligned_cols=25  Identities=36%  Similarity=0.721  Sum_probs=23.1

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998774

>PHA00616 hypothetical protein

Probab=97.49  E-value=4.2e-05  Score=49.01  Aligned_cols=25  Identities=36%  Similarity=0.636  Sum_probs=23.1

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ||+|..||+.|..++.|..|+++|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc
Confidence            6899999999999999999998764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.48  E-value=8.4e-05  Score=40.46  Aligned_cols=23  Identities=39%  Similarity=1.002  Sum_probs=19.7

Q ss_pred             cccCCCCCccCChHHHHHHHhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |.|++|++.|.+...|..|++++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.42  E-value=3.9e-05  Score=43.94  Aligned_cols=26  Identities=31%  Similarity=0.744  Sum_probs=24.3

Q ss_pred             CCcccchhccCCchhhhhhcccccee
Q 026761            4 LTCNSCNREFNDDAEQKLHYKSDWHR   29 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks~~hr   29 (233)
                      |.|..|++.|.+...++.|+++++|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk~Hk   27 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSKKHK   27 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSHHHH
T ss_pred             CCcccCCCCcCCHHHHHHHHccCCCC
Confidence            88999999999999999999998774

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.37  E-value=3.8e-05  Score=68.38  Aligned_cols=70  Identities=23%  Similarity=0.444  Sum_probs=53.1

Q ss_pred             CCCCccc--chhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCCh
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~   79 (233)
                      +||+|..  |.|++.+...|+.|+.--  -||.+-.- .-.|++-..|.             ...|||.|.+|+|.|...
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhG--H~~~~~~~-~p~p~~~~~F~-------------~~~KPYrCevC~KRYKNl  411 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHG--HQNQKLHE-NPSPEKMNIFS-------------AKDKPYRCEVCDKRYKNL  411 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhcc--ccCcccCC-CCCcccccccc-------------ccCCceeccccchhhccC
Confidence            7899988  999999999999999762  24544332 11255455552             357999999999999999


Q ss_pred             HHHHHHHh
Q 026761           80 KALAQHLN   87 (233)
Q Consensus        80 ~~l~~H~~   87 (233)
                      +.|+-|..
T Consensus       412 NGLKYHr~  419 (423)
T COG5189         412 NGLKYHRK  419 (423)
T ss_pred             ccceeccc
Confidence            99998864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.34  E-value=0.00028  Score=68.04  Aligned_cols=80  Identities=14%  Similarity=0.237  Sum_probs=59.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccC--CCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAG--VPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKG   75 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~--l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~   75 (233)
                      .++.|. ||..| ....|..|..+    .++.|..|++.+.  .++.+   |..+...|..|..+. |.+++.|..|||.
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d---~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~  550 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMD---VRDRLRGMSEHESIC-GSRTAPCDSCGRS  550 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccc---hhhhhhhHHHHHHhc-CCcceEccccCCe
Confidence            478999 99765 56788888765    6789999998753  12222   222457889999985 8999999999999


Q ss_pred             cCChHHHHHHHhh
Q 026761           76 YRSSKALAQHLNS   88 (233)
Q Consensus        76 F~s~~~l~~H~~s   88 (233)
                      |..+ .+..|+..
T Consensus       551 Vrlr-dm~~H~~~  562 (567)
T PLN03086        551 VMLK-EMDIHQIA  562 (567)
T ss_pred             eeeh-hHHHHHHH
Confidence            9764 47777654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.10  E-value=0.00042  Score=38.02  Aligned_cols=23  Identities=39%  Similarity=0.895  Sum_probs=21.0

Q ss_pred             cccCCCCCccCChHHHHHHHhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57999999999999999999854

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.00  E-value=0.00013  Score=40.68  Aligned_cols=25  Identities=28%  Similarity=0.728  Sum_probs=22.5

Q ss_pred             CCcccchhccCCchhhhhhccccce
Q 026761            4 LTCNSCNREFNDDAEQKLHYKSDWH   28 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks~~h   28 (233)
                      |.|..|++.|.+...++.|++++.|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~H   25 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKKH   25 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCCC
Confidence            6899999999999999999998543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=96.99  E-value=0.00012  Score=44.05  Aligned_cols=33  Identities=33%  Similarity=0.634  Sum_probs=28.5

Q ss_pred             CCCCCcccchhccCCchhhhhhccccceecCcc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLK   33 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~~hryNlk   33 (233)
                      +.+|.|..|++.|.+...++.|+++..|+-++.
T Consensus         1 ~~~~~C~~C~~~~~~~~~~~~H~~gk~H~~~~~   33 (35)
T smart00451        1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVK   33 (35)
T ss_pred             CcCeEccccCCccCCHHHHHHHHChHHHHHHHH
Confidence            357999999999999999999999988865543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.93  E-value=0.00028  Score=40.03  Aligned_cols=24  Identities=21%  Similarity=0.580  Sum_probs=22.3

Q ss_pred             CCCcccchhccCCchhhhhhcccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ||+|..|++.|.+...|..|++.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            689999999999999999999874

>PHA00616 hypothetical protein

Probab=96.84  E-value=0.00016  Score=46.33  Aligned_cols=23  Identities=26%  Similarity=0.352  Sum_probs=17.0

Q ss_pred             CCCcccchhccCCchhhhhhccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      ||+|..||+.|...+.+++|+++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~   23 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLS   23 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHH
Confidence            57888888888777777776655

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.80  E-value=0.00026  Score=38.62  Aligned_cols=22  Identities=23%  Similarity=0.641  Sum_probs=20.5

Q ss_pred             CCcccchhccCCchhhhhhccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      |+|..|++.|.+...|+.|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6899999999999999999975

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=96.51  E-value=0.0013  Score=61.43  Aligned_cols=30  Identities=33%  Similarity=0.628  Sum_probs=27.6

Q ss_pred             cccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      +.|.+|+|+|.+.+++.+|.+|++|+++++
T Consensus       293 lyC~vCnKsFKseKq~kNHEnSKKHkenv~  322 (508)
T KOG0717|consen  293 LYCVVCNKSFKSEKQLKNHENSKKHKENVA  322 (508)
T ss_pred             eEEeeccccccchHHHHhhHHHHHHHHHHH
Confidence            679999999999999999999999998644

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=96.45  E-value=0.0013  Score=67.91  Aligned_cols=83  Identities=19%  Similarity=0.259  Sum_probs=57.9

Q ss_pred             CCCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHH
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~   81 (233)
                      +.|.|..|+-.|+....|-.|||+..+.-+. +.        |..+... ..+.+-..--.+.++|.|..|..++..+..
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~-~~--------c~~gq~~-~~~arg~~~~~~~~p~~C~~C~~stttng~  533 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQS-AY--------CKAGQNH-PRLARGEVYRCPGKPYPCRACNYSTTTNGN  533 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccch-hH--------hHhcccc-ccccccccccCCCCcccceeeeeeeecchH
Confidence            4588999999999999999999996543332 11        0001000 111111111235689999999999999999


Q ss_pred             HHHHHhhhhhhhh
Q 026761           82 LAQHLNSRSHIMR   94 (233)
Q Consensus        82 l~~H~~s~~hk~~   94 (233)
                      |.+|+.|-+|+.+
T Consensus       534 LsihlqS~~h~~~  546 (1406)
T KOG1146|consen  534 LSIHLQSDLHRNE  546 (1406)
T ss_pred             HHHHHHHHhhHHH
Confidence            9999999999875

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.31  E-value=0.0013  Score=60.84  Aligned_cols=31  Identities=10%  Similarity=0.059  Sum_probs=26.9

Q ss_pred             CCcccCCCCCCCCHHHHHHHhhhhcccccCC
Q 026761          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPD  212 (233)
Q Consensus       182 ~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~  212 (233)
                      .+.|-.|++.|..-..+-+|...+|-.-.+.
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence            6789999999999999999998888765555

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.24  E-value=0.0011  Score=35.93  Aligned_cols=22  Identities=23%  Similarity=0.729  Sum_probs=18.4

Q ss_pred             CCcccchhccCCchhhhhhccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      |.|..|++.|.+...++.|+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            6899999999999999999876

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.86  E-value=0.013  Score=38.97  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=18.3

Q ss_pred             CccccCCCCCccCChHHHHHHHhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +.+.|++|...+.  ..|..|++++
T Consensus        30 ~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen   30 KNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CCccCCCchhhhh--hHHHHHHHHh
Confidence            4689999998765  4889998864

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=95.38  E-value=0.01  Score=42.84  Aligned_cols=23  Identities=30%  Similarity=0.534  Sum_probs=21.5

Q ss_pred             ccccCCCCCccCChHHHHHHHhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      ||.|..||+.|.+..+|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc
Confidence            68999999999999999999985

>smart00355 ZnF_C2H2 zinc finger

Probab=94.89  E-value=0.011  Score=32.08  Aligned_cols=22  Identities=23%  Similarity=0.637  Sum_probs=19.9

Q ss_pred             CCcccchhccCCchhhhhhccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      |.|..|+++|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            6899999999999999999874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.39  E-value=0.019  Score=31.48  Aligned_cols=23  Identities=22%  Similarity=0.413  Sum_probs=19.2

Q ss_pred             cccCCCCCCCCHHHHHHHhhhhcc
Q 026761          184 CCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       184 ~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      .|-+|++.+. ...+.+||.++||
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCcCC-HHHHHHHHHhhCc
Confidence            6999999998 8899999999986

>PRK04860 hypothetical protein; Provisional

Probab=94.23  E-value=0.029  Score=45.94  Aligned_cols=28  Identities=14%  Similarity=0.313  Sum_probs=24.6

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCCh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSS   79 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~   79 (233)
                      ..+..|.++|+++++|.|..|++.|...
T Consensus       129 ~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        129 LTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             CHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            4678999999999999999999998643

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=94.18  E-value=0.033  Score=50.45  Aligned_cols=53  Identities=19%  Similarity=0.258  Sum_probs=46.6

Q ss_pred             CCCCcccCCCCCC-CCHHHHHHHhhhhcccccCCcccccCHHHHHHHHhccccC
Q 026761          180 FDPACCFMCDLPH-DAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVPS  232 (233)
Q Consensus       180 i~~~~ClfC~~~~-~~~~~~~~HM~~~h~ffIP~~~ylvDl~GLl~YL~eKI~~  232 (233)
                      +-..+||||+... ......+.||...|||-|=-.+-||-+.-||.-|.+|.-+
T Consensus       142 ~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r  195 (423)
T KOG2482|consen  142 IFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLER  195 (423)
T ss_pred             eeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhh
Confidence            3457899998865 6789999999999999999999999999999999988754

>KOG3408 consensus U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing [RNA processing and modification]

Probab=94.03  E-value=0.03  Score=43.44  Aligned_cols=36  Identities=22%  Similarity=0.388  Sum_probs=31.8

Q ss_pred             CCCccccCCCCCccCChHHHHHHHhhhhhhhhhhcC
Q 026761           63 TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQG   98 (233)
Q Consensus        63 ~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~~   98 (233)
                      |.-.|.|-.|-+-|.+...|..|.+++.||.|++..
T Consensus        54 G~GqfyCi~CaRyFi~~~~l~~H~ktK~HKrRvK~l   89 (129)
T KOG3408|consen   54 GGGQFYCIECARYFIDAKALKTHFKTKVHKRRVKEL   89 (129)
T ss_pred             CCceeehhhhhhhhcchHHHHHHHhccHHHHHHHhc
Confidence            334589999999999999999999999999987754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.84  E-value=0.054  Score=30.39  Aligned_cols=21  Identities=24%  Similarity=0.725  Sum_probs=17.4

Q ss_pred             cccCCCCCccCChHHHHHHHhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      ..|..||++| ...+|..|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 66779999864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.38  E-value=0.078  Score=28.96  Aligned_cols=22  Identities=27%  Similarity=0.610  Sum_probs=17.6

Q ss_pred             cccCCCCCccCChHHHHHHHhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+|..|..... ...|.+|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            68999998887 88999999875

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.70  E-value=0.11  Score=34.37  Aligned_cols=29  Identities=31%  Similarity=0.616  Sum_probs=20.6

Q ss_pred             CCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           62 ATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        62 ~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ..+.|-.|++|+..+.+..+|++|+.++.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            45678899999999999999999997654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PLN02748 tRNA dimethylallyltransferase

Probab=91.71  E-value=0.11  Score=49.58  Aligned_cols=33  Identities=30%  Similarity=0.596  Sum_probs=29.4

Q ss_pred             CccccCCCCC-ccCChHHHHHHHhhhhhhhhhhc
Q 026761           65 MTYSCGLCGK-GYRSSKALAQHLNSRSHIMRASQ   97 (233)
Q Consensus        65 k~~~C~~C~K-~F~s~~~l~~H~~s~~hk~~~~~   97 (233)
                      +.|.|.+|++ .+........|++|++|+.+.+.
T Consensus       417 ~~~~Ce~C~~~~~~G~~eW~~Hlksr~Hk~~~~~  450 (468)
T PLN02748        417 TQYVCEACGNKVLRGAHEWEQHKQGRGHRKRVQR  450 (468)
T ss_pred             ccccccCCCCcccCCHHHHHHHhcchHHHHHHhH
Confidence            5688999998 79999999999999999987553

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.79  E-value=0.57  Score=35.42  Aligned_cols=27  Identities=26%  Similarity=0.351  Sum_probs=25.1

Q ss_pred             CCCcc----cCCCCCCCCHHHHHHHhhhhcc
Q 026761          181 DPACC----FMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       181 ~~~~C----lfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      +-..|    ..|++...+...+-+|++..||
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            55789    9999999999999999999997

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.98  E-value=0.17  Score=34.11  Aligned_cols=33  Identities=18%  Similarity=0.429  Sum_probs=27.9

Q ss_pred             cCCCCccccCCCCCccCChHHHHHHH-hhhhhhh
Q 026761           61 NATPMTYSCGLCGKGYRSSKALAQHL-NSRSHIM   93 (233)
Q Consensus        61 h~~~k~~~C~~C~K~F~s~~~l~~H~-~s~~hk~   93 (233)
                      ..|+.-+.|+-||+-|..+.+|.+|+ ++|.|+.
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~~~~   45 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHGWLF   45 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhhhhh
Confidence            35777889999999999999999997 5666665

>PF06220 zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.50  E-value=0.33  Score=30.05  Aligned_cols=31  Identities=23%  Similarity=0.343  Sum_probs=17.7

Q ss_pred             ccccCCCCCccC-C-hHHHHHHHhhhhhhhhhh
Q 026761           66 TYSCGLCGKGYR-S-SKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        66 ~~~C~~C~K~F~-s-~~~l~~H~~s~~hk~~~~   96 (233)
                      .|-|+.|.+.|. . .+.-.+|.+..+|+.+..
T Consensus         3 ryyCdyC~~~~~~d~~~~Rk~H~~G~kH~~nv~   35 (38)
T PF06220_consen    3 RYYCDYCKKYLTHDSPSIRKQHERGWKHKENVK   35 (38)
T ss_dssp             S-B-TTT--B-S--SHHHHHHHT--THHHHHHH
T ss_pred             CeecccccceecCCChHHHHHhhccHHHHHHHH
Confidence            478999999993 3 345699999999998643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type zinc finger motif found in several U1 small nuclear ribonucleoprotein C (U1-C) proteins. Some proteins contain multiple copies of this motif. The U1 small nuclear ribonucleoprotein (U1 snRNP) binds to the pre-mRNA 5' splice site at early stages of spliceosome assembly. Recruitment of U1 to a class of weak 5' splice site is promoted by binding of the protein TIA-1 to uridine-rich sequences immediately downstream from the 5' splice site. Binding of TIA-1 in the vicinity of a 5' splice site helps to stabilise U1 snRNP recruitment, at least in part, via a direct interaction with U1-C, thus providing one molecular mechanism for the function of this splicing regulator []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2VRD_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.33  E-value=0.36  Score=31.94  Aligned_cols=44  Identities=16%  Similarity=0.278  Sum_probs=29.3

Q ss_pred             CCCcccchhccCCchhhhhhcccc------ceecCccccccCCCCccHHHHHHHHHHHHHHHhh
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD------WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK   60 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~------~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~   60 (233)
                      .|+|..|++.| +...|..|....      .++|.+|..          .+.   .+|..|+..
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~----------~~~---~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSS----------RVT---DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchh----------hhh---hHHHHHHHH
Confidence            59999999954 567788887763      245555543          122   367778765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3408 consensus U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing [RNA processing and modification]

Probab=89.04  E-value=0.11  Score=40.36  Aligned_cols=27  Identities=33%  Similarity=0.644  Sum_probs=25.1

Q ss_pred             CCCcccchhccCCchhhhhhcccccee
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWHR   29 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~hr   29 (233)
                      .|.|..|.+-|.+...+..|++++.|+
T Consensus        57 qfyCi~CaRyFi~~~~l~~H~ktK~HK   83 (129)
T KOG3408|consen   57 QFYCIECARYFIDAKALKTHFKTKVHK   83 (129)
T ss_pred             eeehhhhhhhhcchHHHHHHHhccHHH
Confidence            489999999999999999999999883

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=87.40  E-value=0.35  Score=27.14  Aligned_cols=21  Identities=10%  Similarity=-0.091  Sum_probs=16.2

Q ss_pred             hhhhhhccccceecCcccccc
Q 026761           17 AEQKLHYKSDWHRYNLKRKVA   37 (233)
Q Consensus        17 ~~lr~H~ks~~hryNlkrkv~   37 (233)
                      .+++.|.+..+|.|+.|++.|
T Consensus         4 ~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHSSSSSEEESSSSEEE
T ss_pred             HHhhhcCCCCCCCCCCCcCee
Confidence            356677777889999998865

...

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=87.34  E-value=0.57  Score=42.81  Aligned_cols=75  Identities=24%  Similarity=0.425  Sum_probs=56.8

Q ss_pred             CcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--C--CC--ccCC
Q 026761            5 TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--C--GK--GYRS   78 (233)
Q Consensus         5 ~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C--~K--~F~s   78 (233)
                      .|..|.+.|.+.+.|+.|++...-+|-+|.+|.   |++..-|..- .+|..|-+.    ..|-|.+  |  ||  .|..
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~---p~~~QYFK~Y-~~Le~HF~~----~hy~ct~qtc~~~k~~vf~~  293 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEACHICDMVG---PIRYQYFKSY-EDLEAHFRN----AHYCCTFQTCRVGKCYVFPY  293 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhhhhhhhccC---ccchhhhhCH-HHHHHHhhc----CceEEEEEEEecCcEEEecc
Confidence            499999999999999999999988899999986   6777777655 677777654    1254542  4  33  3777


Q ss_pred             hHHHHHHHh
Q 026761           79 SKALAQHLN   87 (233)
Q Consensus        79 ~~~l~~H~~   87 (233)
                      .-.|..|+.
T Consensus       294 ~~el~~h~~  302 (493)
T COG5236         294 HTELLEHLT  302 (493)
T ss_pred             HHHHHHHHH
Confidence            777888863

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=86.35  E-value=0.43  Score=41.69  Aligned_cols=34  Identities=18%  Similarity=0.416  Sum_probs=23.6

Q ss_pred             HHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           53 ALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      .+.+|+..-.+ .-|.|-.||+.|.. -+|.+|..=
T Consensus        17 ~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen   17 QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             chHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            34455554333 56899999999987 678888653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.32  E-value=0.25  Score=32.69  Aligned_cols=23  Identities=17%  Similarity=0.367  Sum_probs=14.7

Q ss_pred             CCCcccchhccCCchhhhhhccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      |-+|..|+..+.....||+|+..
T Consensus        24 PatCP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHH
T ss_pred             CCCCCcchhhccchhhHHHHHHH
Confidence            56788888888888888888755

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=86.00  E-value=0.39  Score=47.45  Aligned_cols=84  Identities=19%  Similarity=0.293  Sum_probs=44.2

Q ss_pred             CCcccchhccC---------------Cchhhhhhccc--cceecCccccccCCCCccHHHHHHHHHHHHHHHhh-cCCCC
Q 026761            4 LTCNSCNREFN---------------DDAEQKLHYKS--DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK-NATPM   65 (233)
Q Consensus         4 f~C~~C~~~F~---------------~~~~lr~H~ks--~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~-h~~~k   65 (233)
                      +.|..|+..|.               +...|+.||..  +.|-|.+|-....+--+.-..|.+  ..|..|+.. ..+++
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~--~el~~h~~~gd~d~~  177 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTR--AELNLHLMFGDPDDE  177 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehH--HHHHHHHhcCCCccc
Confidence            56777777773               66789999976  446677774332210011112221  355555543 11111


Q ss_pred             c----cccCCCCCccCChHHHHHHHhhh
Q 026761           66 T----YSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        66 ~----~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .    =.|..|...|-....|.+|++..
T Consensus       178 s~rGhp~C~~C~~~fld~~el~rH~~~~  205 (669)
T KOG2231|consen  178 SCRGHPLCKFCHERFLDDDELYRHLRFD  205 (669)
T ss_pred             cccCCccchhhhhhhccHHHHHHhhccc
Confidence            1    13666666666666666666643

>COG5112 UFD2 U1-like Zn-finger-containing protein [General function prediction only]

Probab=83.84  E-value=0.44  Score=36.23  Aligned_cols=33  Identities=27%  Similarity=0.407  Sum_probs=29.7

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhhhhhhhhc
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~   97 (233)
                      -.|.|-.|.+-|-+..+|..|.+++-|+.|+..
T Consensus        54 GqhYCieCaryf~t~~aL~~HkkgkvHkRR~Ke   86 (126)
T COG5112          54 GQHYCIECARYFITEKALMEHKKGKVHKRRAKE   86 (126)
T ss_pred             ceeeeehhHHHHHHHHHHHHHhccchhHHHHHH
Confidence            347899999999999999999999999998664

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=82.31  E-value=0.27  Score=51.55  Aligned_cols=33  Identities=21%  Similarity=0.271  Sum_probs=28.0

Q ss_pred             CCCccccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           63 TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        63 ~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      .-..| |..|...|+...+|..|+++-.|+.+..
T Consensus      1326 d~~~~-c~~c~~~~~~~~alqihm~~~~~~~kt~ 1358 (1406)
T KOG1146|consen 1326 DCTYH-CLACEVLLSGREALQIHMRSSAHRRKTA 1358 (1406)
T ss_pred             ccccc-chHHHhhcchhHHHHHHHHHhhhcccCC
Confidence            33456 9999999999999999999999987533

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=81.81  E-value=0.44  Score=43.51  Aligned_cols=84  Identities=21%  Similarity=0.278  Sum_probs=55.5

Q ss_pred             CCccc--chhccCCchhhhhhcccccee--cCccccccCCCCccH--HHHHHHHHHHHHHHhhcC---CCCcc-ccCCCC
Q 026761            4 LTCNS--CNREFNDDAEQKLHYKSDWHR--YNLKRKVAGVPGVTE--ALFLARQAALAQEKNKNA---TPMTY-SCGLCG   73 (233)
Q Consensus         4 f~C~~--C~~~F~~~~~lr~H~ks~~hr--yNlkrkv~~l~p~~~--~~F~~k~~~l~~h~~~h~---~~k~~-~C~~C~   73 (233)
                      |.|..  |.+.-..-..|+.|++.+.|+  |.+|-+  ...-|.+  ..|.+  ..|..|+..-.   |-+.+ .|..|+
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~--nKk~F~~E~~lF~~--~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIG--NKKDFWNEIRLFRS--STLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhc--CcccCccceeeeec--ccccccccCCccccCcCCCchhhhcc
Confidence            45543  555555566799999997655  777744  2233333  33553  37777876522   22322 599999


Q ss_pred             CccCChHHHHHHHhhhhh
Q 026761           74 KGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~~h   91 (233)
                      +.|..-.-|..|+|-+.-
T Consensus       228 ~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             ceecChHHHHHHHHhhhh
Confidence            999999999999987653

>smart00586 ZnF_DBF Zinc finger in DBF-like proteins

Probab=80.95  E-value=0.95  Score=29.67  Aligned_cols=30  Identities=30%  Similarity=0.365  Sum_probs=24.6

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      .+|-.|..|.-.|.   .|..|+.|.+|+.-+.
T Consensus         3 ~k~GYCE~Cr~kfd---~l~~Hi~s~~Hr~FA~   32 (49)
T smart00586        3 KKPGYCENCREKYD---DLETHLLSEKHRRFAE   32 (49)
T ss_pred             CCCcccccHhHHHh---hHHHHhccHHHHHHHc
Confidence            46667999999996   6889999999987443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	233
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	5e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4 Length = 127

 Score = 60.4 bits (145), Expect = 5e-12
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNAT 63
             C  C+     ++++  HY+S  H   ++R +A   G       A++   A  +  +  
Sbjct: 33  TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSV--PAKKFKAAPAEISDGE 90

Query: 64  PMTYSCGLCGKGYRSSKALAQHLNSRSHIMR 94
             +  C +C   + S      H   ++HI  
Sbjct: 91  DRSKCCPVCNMTFSSPVVAESHYIGKTHIKN 121

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWH-RYNLKRKVAGVPGVTEALFLARQAALAQEKNKNA 62
             C  C+  ++   E  +H     H R +        P         R+ +L + + K  
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS---KPRKRSLLEMEGKED 76

Query: 63  TPMTYSCGLCGKGYRSSKALAQHLNSRSH 91
                 C  CG  + S + L+ H+    H
Sbjct: 77  AQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	233
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.61
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.61
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.59
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.57
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.57
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.56
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.55
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.54
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.53
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.52
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.51
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.5
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.47
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.47
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.46
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.46
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.45
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.44
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.44
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.44
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.43
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.4
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.38
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.35
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.33
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.32
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.29
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.27
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.2
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.17
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.16
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.15
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.11
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.1
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.09
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.08
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.08
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.06
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.03
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.02
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.01
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.99
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.96
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.95
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.95
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.95
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.95
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.94
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.89
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	98.88
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.87
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.87
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.86
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.85
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.81
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.78
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.74
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.72
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.71
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.71
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.65
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.62
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.6
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.58
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.55
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.54
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.54
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.54
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.54
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.53
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.52
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.52
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.52
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.52
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.52
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.52
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.52
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.52
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.52
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.51
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.51
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.51
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.51
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.51
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.51
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.51
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.51
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.5
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.5
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.5
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.5
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.5
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.5
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.5
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.5
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.49
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.49
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.49
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.49
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.49
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.49
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.49
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.49
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.49
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.48
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.48
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.48
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.48
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.48
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.48
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.48
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.47
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.47
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.47
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.47
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.47
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.46
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.46
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.45
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.45
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.45
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.45
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.44
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.44
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.44
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.44
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.43
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.42
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.42
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.42
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.41
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.4
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.4
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.39
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.39
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.38
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.38
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.38
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.38
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.38
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.38
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.38
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.37
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.37
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.37
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.37
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.35
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.35
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.34
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.34
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.34
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.34
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.33
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.32
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	98.32
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.31
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.31
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.23
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.2
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.17
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.15
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.13
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.11
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.1
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.38
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.07
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.06
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.03
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.03
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.03
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.02
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.02
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.01
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.01
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.0
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.97
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.96
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.96
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.95
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.94
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.93
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.17
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.91
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.88
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.88
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.87
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.87
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.81
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.81
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.81
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.81
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.78
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.77
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.76
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.73
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.71
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.71
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	97.61
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.56
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.7
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.52
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.48
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.45
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.44
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.38
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.36
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.45
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.32
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.41
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.26
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.23
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.21
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.2
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.15
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.14
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.13
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.13
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.12
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.1
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.06
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.04
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.99
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.97
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.96
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.94
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	96.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.88
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	96.84
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.81
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	96.81
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.79
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.79
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.75
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.61
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.28
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.16
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	95.43
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.38
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.8
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.67
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.35
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	93.92
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.65
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.52
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.67
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.57
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	86.13
3cw1_L	77	U1 small nuclear ribonucleoprotein C; PRE-mRNA spl	85.89
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	85.15
3eph_A	409	TRNA isopentenyltransferase; transferase, alternat	83.14

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.5e-16  Score=116.11  Aligned_cols=77  Identities=19%  Similarity=0.406  Sum_probs=68.1

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhh---cCCCCccccCCCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK---NATPMTYSCGLCGK   74 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~---h~~~k~~~C~~C~K   74 (233)
                      ++|.|..|++.|.+...|+.|++.    .+|.|++|++.+..           ...|..|++.   |.++++|.|.+|++
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~~~~~~~~~~~~C~~C~~   74 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFR-----------KENLLEHEARNCMNRSEQVFTCSVCQE   74 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSS-----------HHHHHHHHHHCCCCSCCCCEECSSSCC
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcC-----------HHHHHHHHhhhhcCCCCCCeECCCCCC
Confidence            689999999999999999988876    46899999998665           4789999885   57889999999999


Q ss_pred             ccCChHHHHHHHhhh
Q 026761           75 GYRSSKALAQHLNSR   89 (233)
Q Consensus        75 ~F~s~~~l~~H~~s~   89 (233)
                      .|.+...|..|+++|
T Consensus        75 ~f~~~~~l~~H~~~h   89 (124)
T 2dlq_A           75 TFRRRMELRLHMVSH   89 (124)
T ss_dssp             EESSHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHc
Confidence            999999999999764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.61  E-value=2.3e-16  Score=123.63  Aligned_cols=78  Identities=17%  Similarity=0.280  Sum_probs=71.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.|..|+++|.+...|+.|+++    .+|.|+.|++.|..           ...|..|+++|++++||.|.+|||+|.
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPL-----------AEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESS-----------HHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeeccc-----------ccchhhhccccCCCccccCCCCCCCcC
Confidence            479999999999999999888876    47999999999766           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhh
Q 026761           78 SSKALAQHLNSRS   90 (233)
Q Consensus        78 s~~~l~~H~~s~~   90 (233)
                      +...|..|++++.
T Consensus        90 ~~~~L~~H~~~hh  102 (133)
T 2lt7_A           90 NYQFMSSHIKSVH  102 (133)
T ss_dssp             SHHHHHHHHHHHT
T ss_pred             CHHHHHHHhHHhc
Confidence            9999999998864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.59  E-value=1.2e-15  Score=124.43  Aligned_cols=78  Identities=19%  Similarity=0.384  Sum_probs=70.1

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.|..|++.|.+...|+.|++.    .++.|.+|++.+..           ...|..|+++|.++++|.|.+|++.|.
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~  116 (190)
T 2i13_A           48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQ-----------RANLRAHQRTHTGEKPYACPECGKSFS  116 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC-----------HHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred             CCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCC-----------HHHHHHHHHhcCCCCCCcCCCCCCccC
Confidence            579999999999999999988876    46899999998766           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhh
Q 026761           78 SSKALAQHLNSRS   90 (233)
Q Consensus        78 s~~~l~~H~~s~~   90 (233)
                      +...|..|+++|.
T Consensus       117 ~~~~l~~H~~~h~  129 (190)
T 2i13_A          117 QLAHLRAHQRTHT  129 (190)
T ss_dssp             SHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhC
Confidence            9999999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.1e-15  Score=108.54  Aligned_cols=78  Identities=19%  Similarity=0.344  Sum_probs=71.0

Q ss_pred             CCCCcccchhccCCchhhhhhcccc----ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD----WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~----~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.|..|++.|.+...|+.|++.+    +|.|..|++.+..           ...|..|+++|+++++|.|.+|++.|.
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~   75 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAAD-----------SSSLNKHLRIHSDERPFKCQICPYASR   75 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESS-----------HHHHHHHHHHSCCCCCEECSSSSCEES
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCC-----------HHHHHHHHHHhCCCCCccCCCCCCccC
Confidence            6899999999999999999999874    5899999998665           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhh
Q 026761           78 SSKALAQHLNSRS   90 (233)
Q Consensus        78 s~~~l~~H~~s~~   90 (233)
                      +...|..|+++|.
T Consensus        76 ~~~~l~~H~~~h~   88 (96)
T 2dmd_A           76 NSSQLTVHLRSHT   88 (96)
T ss_dssp             SHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHhc
Confidence            9999999998763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.57  E-value=1.5e-15  Score=106.84  Aligned_cols=77  Identities=16%  Similarity=0.301  Sum_probs=69.9

Q ss_pred             CCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      ||.|..|++.|.+...|+.|+++    .++.|..|++.+..           ...|..|+++|+++++|.|.+|++.|.+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~   69 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQ-----------KSDMKKHTFIHTGEKPHKCQVCGKAFSQ   69 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESS-----------HHHHHHHHHHHHTCCCEECTTTSCEESS
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCC-----------HHHHHHHHHHhcCCCCCcCCCcchhhCC
Confidence            68999999999999999888875    56999999998765           4789999999999999999999999999


Q ss_pred             hHHHHHHHhhhh
Q 026761           79 SKALAQHLNSRS   90 (233)
Q Consensus        79 ~~~l~~H~~s~~   90 (233)
                      ...|..|+++|.
T Consensus        70 ~~~l~~H~~~H~   81 (82)
T 2kmk_A           70 SSNLITHSRKHT   81 (82)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             hHHHHHHHHhhC
Confidence            999999999863

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.56  E-value=9.2e-15  Score=110.84  Aligned_cols=77  Identities=18%  Similarity=0.381  Sum_probs=68.7

Q ss_pred             CCCCcc--cchhccCCchhhhhhccc---cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--CCC
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKS---DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGK   74 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks---~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C~K   74 (233)
                      ++|.|.  .|++.|.+...|+.|++.   .+|.|+.|++.+..           ...|..|+++|+++++|.|.+  |++
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~~   72 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVE-----------SSKLKRHQLVHTGEKPFQCTFEGCGK   72 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESS-----------HHHHHHHGGGTSCCCCEECCSTTCCC
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCC-----------HHHHHHHHHHcCCCCCeeCCCCCCcC
Confidence            579999  899999999999999876   46899999998766           478999999999999999986  999


Q ss_pred             ccCChHHHHHHHhhh
Q 026761           75 GYRSSKALAQHLNSR   89 (233)
Q Consensus        75 ~F~s~~~l~~H~~s~   89 (233)
                      .|.+...|..|+++|
T Consensus        73 ~f~~~~~l~~H~~~h   87 (124)
T 1ubd_C           73 RFSLDFNLRTHVRIH   87 (124)
T ss_dssp             EESCHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHh
Confidence            999999999999764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.55  E-value=6.9e-15  Score=108.73  Aligned_cols=78  Identities=22%  Similarity=0.406  Sum_probs=70.7

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.|..|++.|.+...|+.|++.    .+|.|.+|++.+..           ...|..|+++|+++++|.|.+|++.|.
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~   84 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR-----------QDHLRDHRYIHSKEKPFKCQECGKGFC   84 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC-----------HHHHHHHGGGSCCCCTTSCSSSCCCCS
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC-----------HHHHHHHHHHhCCCCCeECCCcCCccc
Confidence            579999999999999999888876    46899999998766           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhh
Q 026761           78 SSKALAQHLNSRS   90 (233)
Q Consensus        78 s~~~l~~H~~s~~   90 (233)
                      +...|..|+++|.
T Consensus        85 ~~~~L~~H~~~H~   97 (106)
T 2ee8_A           85 QSRTLAVHKTLHM   97 (106)
T ss_dssp             SHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHhC
Confidence            9999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.54  E-value=6.7e-15  Score=115.96  Aligned_cols=77  Identities=21%  Similarity=0.353  Sum_probs=67.9

Q ss_pred             CCCCcccchhccCCchhhhhhccc-c------------ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS-D------------WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYS   68 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks-~------------~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~   68 (233)
                      .+|.|..|++.|.+...|+.|++. +            |+.|..|++.+..           ...|..|+++|+++++|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~   92 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA-----------KYKLVNHIRVHTGEKPFP   92 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSS-----------HHHHHHHTHHHHCCCSEE
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCC-----------HHHHHHHHHhcCCCCccc
Confidence            468999999999999999999876 2            3789999998665           478999999999999999


Q ss_pred             cCC--CCCccCChHHHHHHHhhh
Q 026761           69 CGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        69 C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      |.+  |++.|.+...|..|+++|
T Consensus        93 C~~~~C~~~f~~~~~L~~H~~~h  115 (155)
T 2rpc_A           93 CPFPGCGKIFARSENLKIHKRTH  115 (155)
T ss_dssp             CSCTTTCCEESCHHHHHHHHTTT
T ss_pred             CCcCCCCCccCCHHHHHHHHHhh
Confidence            998  999999999999998753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.53  E-value=5.8e-15  Score=105.67  Aligned_cols=78  Identities=15%  Similarity=0.358  Sum_probs=70.6

Q ss_pred             CCCCcc--cchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKG   75 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~   75 (233)
                      +||.|.  .|++.|.+...|+.|+++    .++.|..|++.+..           ...|..|+++|+++++|.|.+|++.
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~   71 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSR-----------SDHLTTHIRTHTGEKPFACDICGRK   71 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC-----------HHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCC-----------HHHHHHHHHHcCCCCCccCCCCCch
Confidence            689998  699999999999888876    46899999998766           4789999999999999999999999


Q ss_pred             cCChHHHHHHHhhhh
Q 026761           76 YRSSKALAQHLNSRS   90 (233)
Q Consensus        76 F~s~~~l~~H~~s~~   90 (233)
                      |.+...|..|+++|.
T Consensus        72 f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           72 FARSDERKRHTKIHL   86 (90)
T ss_dssp             ESSHHHHHHHHGGGG
T ss_pred             hCCHHHHHHHHHHhc
Confidence            999999999999864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.53  E-value=1.3e-14  Score=108.92  Aligned_cols=77  Identities=13%  Similarity=0.323  Sum_probs=69.0

Q ss_pred             CCCCccc--chhccCCchhhhhhccc----cceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS----DWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks----~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      ++|.|..  |++.|.+...|+.|++.    .++.|.  .|++.+..           ...|..|+++|+++++|.|.+|+
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~   73 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSR-----------SDQLKRHQRRHTGVKPFQCKTCQ   73 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESS-----------HHHHHHHHHHHHCCCCEECTTTC
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCC-----------HHHHHHHHHHcCCCCCccCCccC
Confidence            6899997  99999999999888875    568998  79998665           47899999999999999999999


Q ss_pred             CccCChHHHHHHHhhh
Q 026761           74 KGYRSSKALAQHLNSR   89 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~   89 (233)
                      +.|.+...|..|+++|
T Consensus        74 ~~f~~~~~l~~H~~~h   89 (119)
T 2jp9_A           74 RKFSRSDHLKTHTRTH   89 (119)
T ss_dssp             CEESCHHHHHHHHHHH
T ss_pred             chhCCHHHHHHHHHHh
Confidence            9999999999999864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.52  E-value=1.3e-14  Score=118.25  Aligned_cols=78  Identities=17%  Similarity=0.351  Sum_probs=60.9

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.|..|++.|.+...|+.|++.    .++.|..|++.+..           ...|..|+++|.++++|.|.+|++.|.
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD-----------KKDLTRHQRTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESS-----------HHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCC-----------HHHHHHHHHhcCCCCCccCcccCCccC
Confidence            579999999999999999999986    46899999998766           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhh
Q 026761           78 SSKALAQHLNSRS   90 (233)
Q Consensus        78 s~~~l~~H~~s~~   90 (233)
                      +...|..|+++|.
T Consensus        89 ~~~~l~~H~~~h~  101 (190)
T 2i13_A           89 QRANLRAHQRTHT  101 (190)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcC
Confidence            9999999998764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.3e-14  Score=108.12  Aligned_cols=80  Identities=15%  Similarity=0.306  Sum_probs=71.8

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYR   77 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~   77 (233)
                      ++|.| .|++.|.+...|+.|++.    .+|.|..|++.|..           ...|..|+++|+++++|.|.+|++.|.
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKM-----------KHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESS-----------SHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCC-----------HHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            68999 999999999999999886    46899999998765           478999999999999999999999999


Q ss_pred             ChHHHHHHHhhhhhhh
Q 026761           78 SSKALAQHLNSRSHIM   93 (233)
Q Consensus        78 s~~~l~~H~~s~~hk~   93 (233)
                      +...|..|+++|....
T Consensus        77 ~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           77 WRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccccc
Confidence            9999999999986544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.1e-14  Score=103.87  Aligned_cols=76  Identities=20%  Similarity=0.355  Sum_probs=68.5

Q ss_pred             CCCCcccchhccCCchhhhhhcccc----ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCC--CccccCCCCCc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD----WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATP--MTYSCGLCGKG   75 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~----~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~--k~~~C~~C~K~   75 (233)
                      ++|.|..|++.|.+...|+.|++++    +|.|+.|++.+..           ...|..|+++|+++  ++|.|.+|++.
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~~~C~~C~~~   74 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKR-----------KDRMSYHVRSHDGSVGKPYICQSCGKG   74 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESC-----------HHHHHHHHHHHCCCCCSSBCCSSSCCC
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCC-----------HHHHHHHHHHhcCCCCCceECCCccch
Confidence            6899999999999999999998864    5899999998766           47899999999887  89999999999


Q ss_pred             cCChHHHHHHHhh
Q 026761           76 YRSSKALAQHLNS   88 (233)
Q Consensus        76 F~s~~~l~~H~~s   88 (233)
                      |.+...|..|++.
T Consensus        75 f~~~~~L~~H~~~   87 (95)
T 2yt9_A           75 FSRPDHLNGHIKQ   87 (95)
T ss_dssp             BSSHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHH
Confidence            9999999999863

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.9e-14  Score=105.94  Aligned_cols=76  Identities=14%  Similarity=0.138  Sum_probs=68.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc--cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCCh
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS--DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks--~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~   79 (233)
                      ++|.|..|++.|.+...|+.|++.  .+|.|..|++.+..           ...|..|++ |++++||.|.+|++.|.+.
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~-----------~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFS-----------PELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSS-----------HHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCC-----------HHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            689999999999999999999986  56899999998765           478899996 9999999999999999999


Q ss_pred             HHHHHHHh-hh
Q 026761           80 KALAQHLN-SR   89 (233)
Q Consensus        80 ~~l~~H~~-s~   89 (233)
                      ..|..|++ .|
T Consensus        83 ~~L~~H~~~~H   93 (107)
T 1wjp_A           83 FSIWRHQVEVH   93 (107)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHc
Confidence            99999997 44

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.47  E-value=4.5e-14  Score=100.75  Aligned_cols=77  Identities=17%  Similarity=0.343  Sum_probs=69.0

Q ss_pred             CCCCccc--chhccCCchhhhhhccc----cceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS----DWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks----~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      .+|.|..  |++.|.+...|+.|++.    .++.|.  .|++.+..           ...|..|+++|+++++|.|.+|+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~   72 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFAR-----------SDELTRHYRKHTGHRPFQCQKCD   72 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESS-----------HHHHHHHHHHHHCCCCEECSSSS
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCC-----------HHHHHHHHHHcCCCCCccCCCCC
Confidence            5799999  99999999999999886    458886  59998665           47899999999999999999999


Q ss_pred             CccCChHHHHHHHhhh
Q 026761           74 KGYRSSKALAQHLNSR   89 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~   89 (233)
                      +.|.+...|..|+++|
T Consensus        73 ~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           73 RAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CEESSHHHHHHHGGGG
T ss_pred             cccCCHHHHHHHHHhh
Confidence            9999999999999986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.3e-15  Score=111.55  Aligned_cols=81  Identities=19%  Similarity=0.365  Sum_probs=70.0

Q ss_pred             CCCCcccchhccCCchhhhhhccc--c-----ceecCcccccc--CCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS--D-----WHRYNLKRKVA--GVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks--~-----~hryNlkrkv~--~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +||.|..|++.|.+...|+.|++.  +     ++.|..|++.+  ..           ...|..|+++|++++||.|.+|
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~-----------~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR-----------KRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCC-----------CCCCCCCCCSCCCCSSCBCSSS
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCccccccc-----------HHHHHHHhhccCCCcceECCCC
Confidence            689999999999999999999986  2     23488999876  33           2567889999999999999999


Q ss_pred             CCccCChHHHHHHHhhhhhhh
Q 026761           73 GKGYRSSKALAQHLNSRSHIM   93 (233)
Q Consensus        73 ~K~F~s~~~l~~H~~s~~hk~   93 (233)
                      +|.|.+...|..|++.|.+..
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999987754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.46  E-value=7.3e-14  Score=105.32  Aligned_cols=76  Identities=14%  Similarity=0.295  Sum_probs=69.4

Q ss_pred             CCCCcccchhccCCchhhhhhccc-------cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS-------DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGK   74 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks-------~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K   74 (233)
                      ++|.|..|++.|.+...|+.|++.       .++.|.+|++.+..           ...|..|+++|++++||.|.+|++
T Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~  102 (124)
T 2dlq_A           34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRR-----------RMELRLHMVSHTGEMPYKCSSCSQ  102 (124)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESS-----------HHHHHHHHHHHSSSCSEECSSSCC
T ss_pred             CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCC-----------HHHHHHHHHHcCCCCCccCCCccc
Confidence            689999999999999999999863       46899999998766           478999999999999999999999


Q ss_pred             ccCChHHHHHHHhh
Q 026761           75 GYRSSKALAQHLNS   88 (233)
Q Consensus        75 ~F~s~~~l~~H~~s   88 (233)
                      .|.+...|..|++.
T Consensus       103 ~f~~~~~l~~H~~~  116 (124)
T 2dlq_A          103 QFMQKKDLQSHMIK  116 (124)
T ss_dssp             EESSHHHHHHHHHH
T ss_pred             hhCCHHHHHHHHHH
Confidence            99999999999975

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.45  E-value=1.7e-13  Score=111.44  Aligned_cols=77  Identities=17%  Similarity=0.274  Sum_probs=67.7

Q ss_pred             CCCCc--ccchhccCCchhhhhhcccc----ceecC--ccccccCCCCccHHHHHHHHHHHHHHH-hhc-CCCCcccc--
Q 026761            2 PGLTC--NSCNREFNDDAEQKLHYKSD----WHRYN--LKRKVAGVPGVTEALFLARQAALAQEK-NKN-ATPMTYSC--   69 (233)
Q Consensus         2 ~~f~C--~~C~~~F~~~~~lr~H~ks~----~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~-~~h-~~~k~~~C--   69 (233)
                      ++|.|  ..|++.|.+...|+.|++++    ++.|+  .|++.+..           ...|..|+ +.| .+.++|.|  
T Consensus        41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~~h~~~~~~~~C~~  109 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT-----------KANMKKHFNRFHNIKICVYVCHF  109 (190)
T ss_dssp             CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC-----------HHHHHHHHHTTSSTTTSCCEECS
T ss_pred             CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC-----------HHHHHHHHHHhcCCCcceeeCCC
Confidence            68999  88999999999999998874    68999  89998766           47899998 667 57889999  


Q ss_pred             CCCCCccCChHHHHHHHhhh
Q 026761           70 GLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        70 ~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..|||.|.+...|..|+++|
T Consensus       110 ~~C~k~f~~~~~L~~H~~~H  129 (190)
T 1tf6_A          110 ENCGKAFKKHNQLKVHQFSH  129 (190)
T ss_dssp             SSSCEECSSHHHHHHHHGGG
T ss_pred             CCCccccCCHHHHHHHHHHh
Confidence            99999999999999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.44  E-value=1e-13  Score=101.02  Aligned_cols=78  Identities=17%  Similarity=0.354  Sum_probs=69.0

Q ss_pred             CCCCccc--chhccCCchhhhhhccc----cceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS----DWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks----~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      ++|.|..  |++.|.+...|+.|++.    .+|.|.  .|++.+..           ...|..|+++|+++++|.|.+|+
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~   82 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR-----------SDELTRHYRKHTGAKPFQCGVCN   82 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESS-----------HHHHHHHHHHHTSCCSCBCSSSC
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCC-----------HHHHHHHHHHhCCCCCeECCCCc
Confidence            5799996  99999999999888876    468895  69998665           47899999999999999999999


Q ss_pred             CccCChHHHHHHHhhhh
Q 026761           74 KGYRSSKALAQHLNSRS   90 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~~   90 (233)
                      +.|.+...|..|+++|.
T Consensus        83 ~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           83 RSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             CBCSSHHHHHHHHHHHC
T ss_pred             CccCCHHHHHHHHHHhC
Confidence            99999999999999873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.44  E-value=7.2e-14  Score=94.99  Aligned_cols=39  Identities=23%  Similarity=0.483  Sum_probs=34.4

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ..|..|+++|+|++||.|.+|||+|.+.+.|..|+++|.
T Consensus        18 ~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C           18 SGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             HHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             HHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            456666777899999999999999999999999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.4e-13  Score=107.97  Aligned_cols=78  Identities=19%  Similarity=0.316  Sum_probs=65.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc-------cceecCcc-----ccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS-------DWHRYNLK-----RKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks-------~~hryNlk-----rkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      -+|.|..|++.|.+...|+.|++.       .++.|.+|     ++.+..           ...|..|+++|++++||.|
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~-----------~~~l~~H~~~h~~~~~~~C   70 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKA-----------QYMLVVHMRRHTGEKPHKC   70 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSS-----------HHHHHHHTHHHHCCCCCCC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhh-----------HHHHHHHHHhcCCCCCccC
Confidence            478999999999999999999872       45777653     366544           3789999999999999999


Q ss_pred             CC--CCCccCChHHHHHHHhhhh
Q 026761           70 GL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        70 ~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      .+  |++.|.+...|..|+++|.
T Consensus        71 ~~~~C~~~f~~~~~l~~H~~~h~   93 (155)
T 2gli_A           71 TFEGCRKSYSRLENLKTHLRSHT   93 (155)
T ss_dssp             CSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCCcccCHHHHHHHHHHcC
Confidence            86  9999999999999998753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.43  E-value=7.5e-14  Score=104.68  Aligned_cols=77  Identities=19%  Similarity=0.377  Sum_probs=69.9

Q ss_pred             CCCCcc--cchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc--CCCC
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC--GLCG   73 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C--~~C~   73 (233)
                      ++|.|.  .|++.|.+...|+.|+++    .++.|+.|++.+..           ...|..|+++|+++++|.|  ..||
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~  103 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSR-----------SDHLKTHTRTHTGEKPFSCRWPSCQ  103 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC-----------HHHHHHHHHHHHTCCCEECCSTTCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCC-----------HHHHHHHHHHhcCCCCeeCCCCCCc
Confidence            579999  799999999999988876    46999999998766           4789999999999999999  8999


Q ss_pred             CccCChHHHHHHHhhh
Q 026761           74 KGYRSSKALAQHLNSR   89 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~   89 (233)
                      +.|.+...|..|+++|
T Consensus       104 ~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          104 KKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEESSHHHHHHHHHTC
T ss_pred             cccCCHHHHHHHHhcC
Confidence            9999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.40  E-value=8.8e-13  Score=107.22  Aligned_cols=76  Identities=13%  Similarity=0.260  Sum_probs=68.0

Q ss_pred             CCCCc--ccchhccCCchhhhhhccc----cceec--CccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC--C
Q 026761            2 PGLTC--NSCNREFNDDAEQKLHYKS----DWHRY--NLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--L   71 (233)
Q Consensus         2 ~~f~C--~~C~~~F~~~~~lr~H~ks----~~hry--Nlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~--~   71 (233)
                      ++|.|  ..|+++|.+...|+.|++.    .+|.|  +.|++.+..           ...|..|+++|.++++|.|.  .
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~   79 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTS-----------LHHLTRHSLTHTGEKNFTCDSDG   79 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSS-----------HHHHHHHHTTTTTCCCEECCSSS
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCC-----------HHHHHHHHHHccCCCceeCCCCC
Confidence            67999  6899999999999888875    57899  899998766           47899999999999999999  8


Q ss_pred             CCCccCChHHHHHHHhh
Q 026761           72 CGKGYRSSKALAQHLNS   88 (233)
Q Consensus        72 C~K~F~s~~~l~~H~~s   88 (233)
                      |++.|.+...|..|++.
T Consensus        80 C~~~f~~~~~l~~H~~~   96 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNR   96 (190)
T ss_dssp             CCCEESCHHHHHHHHHT
T ss_pred             CCCccCCHHHHHHHHHH
Confidence            99999999999999943

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.38  E-value=2.7e-13  Score=102.68  Aligned_cols=78  Identities=18%  Similarity=0.299  Sum_probs=69.5

Q ss_pred             CCCCcccchhccCCchhhhhhcccc----ceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC--CCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD----WHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCG   73 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~----~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~--~C~   73 (233)
                      ++|.|..|++.|.+...|+.|++.+    ++.|..  |++.+..           ...|..|+++|+++++|.|.  .|+
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~  101 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL-----------DFNLRTHVRIHTGDRPYVCPFDGCN  101 (124)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESC-----------HHHHHHHHHHHHCCCCCCCCSTTCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCC-----------HHHHHHHHHHhCCCCceECCCCCCC
Confidence            5799999999999999999998873    689976  9998766           47899999999999999995  599


Q ss_pred             CccCChHHHHHHHhhhh
Q 026761           74 KGYRSSKALAQHLNSRS   90 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~~   90 (233)
                      +.|.+...|..|+++|.
T Consensus       102 ~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C          102 KKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             CCCSSTTTTHHHHHHHC
T ss_pred             CccCCHHHHHHHHHHHc
Confidence            99999999999999864

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.35  E-value=7.9e-13  Score=103.35  Aligned_cols=59  Identities=12%  Similarity=0.108  Sum_probs=52.3

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +.|-+..+|.|++|++.|..           ...|..|+++|++++||.|.+|||.|.+...|..|+++|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   73 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVC-----------LTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHH   73 (133)
T ss_dssp             EEETTEEEEEETTTCCEESC-----------HHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             eecCCCcCeECCCCCCCcCC-----------HHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcccc
Confidence            44555678999999999776           588999999999999999999999999999999999864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.33  E-value=8.5e-13  Score=103.79  Aligned_cols=76  Identities=13%  Similarity=0.275  Sum_probs=68.6

Q ss_pred             CCcccchhccCCchhhhhhccc----cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--CCCc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS----DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKG   75 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks----~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C~K~   75 (233)
                      |.|..|++.|.+...|+.|+++    .+|.|..  |++.+..           ...|..|+++|+++++|.|.+  |+|.
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~L~~H~~~h~~~~~~~C~~~~C~k~  131 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR-----------SENLKIHKRTHTGEKPFKCEFEGCDRR  131 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC-----------HHHHHHHHTTTCSSCSBCCSSTTCCCC
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC-----------HHHHHHHHHhhCCCCCccCCCCCCCCc
Confidence            8999999999999999888876    5699998  9998766           478999999999999999997  9999


Q ss_pred             cCChHHHHHHHhhhh
Q 026761           76 YRSSKALAQHLNSRS   90 (233)
Q Consensus        76 F~s~~~l~~H~~s~~   90 (233)
                      |.+...|..|+++|.
T Consensus       132 f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A          132 FANSSDRKKHMHVHT  146 (155)
T ss_dssp             BSSHHHHHHSSTTTT
T ss_pred             cCCHHHHHHHHHHhc
Confidence            999999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.32  E-value=8.4e-14  Score=99.96  Aligned_cols=79  Identities=9%  Similarity=0.136  Sum_probs=69.2

Q ss_pred             CCCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCcc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGY   76 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F   76 (233)
                      ++||.|..|++.|.+...|+.|+++    .+|.|+.|++.+..           ...|..|+++|.+ .+|.|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~h~~-~~~~c~~C~~~f   68 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR-----------SDERKRHRDIQHI-LPILEDKVEELL   68 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS-----------HHHHHHHHHHHTH-HHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCC-----------HHHHHHHHHHhCC-CcchHHHHHHHH
Confidence            4799999999999999999888876    46999999998766           4789999999764 789999999999


Q ss_pred             CChHHHHHHHhhhhh
Q 026761           77 RSSKALAQHLNSRSH   91 (233)
Q Consensus        77 ~s~~~l~~H~~s~~h   91 (233)
                      .+...|.+|++..+-
T Consensus        69 ~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           69 SKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHH
Confidence            999999999987553

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.29  E-value=1.6e-12  Score=91.50  Aligned_cols=73  Identities=18%  Similarity=0.262  Sum_probs=65.4

Q ss_pred             CCCc--ccchhccCCchhhhhhccc----cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC---
Q 026761            3 GLTC--NSCNREFNDDAEQKLHYKS----DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL---   71 (233)
Q Consensus         3 ~f~C--~~C~~~F~~~~~lr~H~ks----~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~---   71 (233)
                      ||.|  ..|++.|.+...|+.|+++    .++.|+.  |++.+..           ...|..|+++|++   |.|..   
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~---~~C~~~~~   66 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL-----------PSRLKRHEKVHAG---YPCKKDDS   66 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESS-----------HHHHHHHHHHHHS---EECCSCSS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCC-----------HHHHHHHHHHhCC---CCCCCCCC
Confidence            6899  9999999999998888876    5699998  9998765           4789999999988   99999   


Q ss_pred             CCCccCChHHHHHHHhhh
Q 026761           72 CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        72 C~K~F~s~~~l~~H~~s~   89 (233)
                      |++.|.+...|..|+++|
T Consensus        67 C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           67 CSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             CCCEESSHHHHHHHHHHC
T ss_pred             CCCccCCHHHHHHHHHhc
Confidence            999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.3e-12  Score=90.00  Aligned_cols=65  Identities=18%  Similarity=0.318  Sum_probs=57.2

Q ss_pred             CCCCccc--chhccCCchhhhhhcc-c----cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYK-S----DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~k-s----~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      ++|.|..  |++.|.+...|+.|++ .    .+|.|+.  |++.+..           ...|..|+++|++++||.|.+|
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   74 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNF-----------KKHLKEHMKLHSDTRDYICEFS   74 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESS-----------HHHHHHHHHHHHTSCCCSCCSS
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCC-----------HHHHHHHHHHhCCCCCeeCCCC
Confidence            5788887  9999999999988887 3    5799998  9998665           4789999999999999999999


Q ss_pred             CCccC
Q 026761           73 GKGYR   77 (233)
Q Consensus        73 ~K~F~   77 (233)
                      ||+|.
T Consensus        75 ~k~F~   79 (79)
T 2dlk_A           75 GPSSG   79 (79)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            99995

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.25  E-value=2.4e-12  Score=100.83  Aligned_cols=65  Identities=20%  Similarity=0.333  Sum_probs=33.5

Q ss_pred             hccCCchhhhhhccc----cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--CCCccCChHHH
Q 026761           11 REFNDDAEQKLHYKS----DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKGYRSSKAL   82 (233)
Q Consensus        11 ~~F~~~~~lr~H~ks----~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C~K~F~s~~~l   82 (233)
                      +.|.+...|+.|++.    .++.|.+  |++.+..           ...|..|+++|+++++|.|.+  |++.|.+...|
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  115 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR-----------LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR  115 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS-----------HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTT
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC-----------HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHH
Confidence            555555555555543    2455553  5555433           244555555555555555554  55555555555


Q ss_pred             HHHH
Q 026761           83 AQHL   86 (233)
Q Consensus        83 ~~H~   86 (233)
                      ..|+
T Consensus       116 ~~H~  119 (155)
T 2gli_A          116 AKHQ  119 (155)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.23  E-value=1.2e-11  Score=86.50  Aligned_cols=52  Identities=15%  Similarity=0.274  Sum_probs=46.8

Q ss_pred             ceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           27 WHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        27 ~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +|.|+.|++.+..           ...|..|+++|.++++|.|..|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   52 (82)
T 2kmk_A            1 SFDCKICGKSFKR-----------SSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH   52 (82)
T ss_dssp             CEECSSSCCEESS-----------HHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccC-----------chhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHh
Confidence            4789999998766           478999999999999999999999999999999998764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-11  Score=87.80  Aligned_cols=54  Identities=15%  Similarity=0.250  Sum_probs=48.1

Q ss_pred             cccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           24 KSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        24 ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      ...+|.|.+|++.+..           ...|..|+++|+++++|.|.+|++.|.+...|..|+++
T Consensus        14 ~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   67 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTK-----------SYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI   67 (106)
T ss_dssp             CCCCCBCSSSCCBCSS-----------HHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG
T ss_pred             CCcCeECCCCCCccCC-----------HHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH
Confidence            3467999999998766           47899999999999999999999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.19  E-value=3.8e-11  Score=86.49  Aligned_cols=54  Identities=20%  Similarity=0.333  Sum_probs=48.4

Q ss_pred             ccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           25 SDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        25 s~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..+|.|+.|++.+..           ...|..|+++|+++++|.|.+|++.|.+...|..|+++|
T Consensus         5 ~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   58 (95)
T 2yt9_A            5 SSGVACEICGKIFRD-----------VYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH   58 (95)
T ss_dssp             CSCEECSSSCCEESS-----------SHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCeECCCCCCccCC-----------hHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHh
Confidence            457999999998765           478999999999999999999999999999999999864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=2e-11  Score=84.18  Aligned_cols=63  Identities=17%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             hhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           17 AEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        17 ~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ...+.|....+|.|.+|++.|..           ...|..|+++|++++||.|.+|++.|.+...|..|+++|.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSR-----------SSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESS-----------HHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCcccCCCCCccCCCCCCccCC-----------HHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34567888889999999998665           4789999999999999999999999999999999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.17  E-value=4.2e-11  Score=86.40  Aligned_cols=55  Identities=20%  Similarity=0.273  Sum_probs=49.0

Q ss_pred             cccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           24 KSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        24 ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ...+|.|.+|++.+..           ...|..|+++|.++++|.|.+|++.|.+...|..|+++|
T Consensus         5 ~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   59 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSR-----------KDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH   59 (96)
T ss_dssp             CCCCCCBTTTTBCCCC-----------HHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcCeECCCCCCccCC-----------HHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHh
Confidence            4467999999998766           478999999999999999999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.16  E-value=2.9e-11  Score=87.59  Aligned_cols=59  Identities=17%  Similarity=0.268  Sum_probs=51.9

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      +..|...++|.|++|++.|..           ...|..|+++|++++||.|.+|+|+|.++..|.+|++.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~-----------~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFAS-----------KGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESS-----------HHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCCCEECCCCCCCcCc-----------HHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            455666678999999998766           48899999999999999999999999999999999754

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.15  E-value=2.8e-11  Score=79.23  Aligned_cols=40  Identities=20%  Similarity=0.545  Sum_probs=34.1

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhhh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      ..|..|+++|++++||.|..|++.|.+...|..|+++|.+
T Consensus        15 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A           15 SMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             HHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             HHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            4455566667889999999999999999999999998865

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.12  E-value=1.7e-11  Score=93.60  Aligned_cols=75  Identities=13%  Similarity=0.096  Sum_probs=61.6

Q ss_pred             CCCcccchhccC------Cchhhhhhcc---ccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761            3 GLTCNSCNREFN------DDAEQKLHYK---SDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus         3 ~f~C~~C~~~F~------~~~~lr~H~k---s~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      +|.|..|+..|.      ....|+.|++   ..+|.|+.|++.|..           ...|..|+++|  ++||.|.+||
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~-----------~~~l~~H~~~H--~~~~~C~~C~  107 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSS-----------SVSLKQHIRYT--EHTKVCPVCK  107 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESS-----------HHHHHHHHHHT--CCCCBCTTTC
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCC-----------HhHHHHHHHHC--CCCCCCCCCC
Confidence            356888877776      4455655553   478999999998766           47899999999  8899999999


Q ss_pred             CccCChHHHHHHHhhhh
Q 026761           74 KGYRSSKALAQHLNSRS   90 (233)
Q Consensus        74 K~F~s~~~l~~H~~s~~   90 (233)
                      |.|.+...|..|+++|.
T Consensus       108 k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A          108 KEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             CBCSSHHHHHHHHHHTT
T ss_pred             cccCCHHHHHHHHHHHC
Confidence            99999999999998864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.12  E-value=8.1e-11  Score=81.42  Aligned_cols=58  Identities=17%  Similarity=0.287  Sum_probs=47.2

Q ss_pred             hccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           22 HYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        22 H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +....+|.|+.|++.|..           ...|..|+++|+++++|.|.+|+|.|.+...|..|+++|.
T Consensus        12 ~~~~~~~~C~~C~k~f~~-----------~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRY-----------KGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSC-----------HHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC
T ss_pred             cCCCCCeECCCCCceeCC-----------HHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC
Confidence            344456777777776554           3677888888899999999999999999999999998864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=9.5e-11  Score=86.84  Aligned_cols=56  Identities=16%  Similarity=0.245  Sum_probs=50.0

Q ss_pred             hhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           21 LHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        21 ~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      .|....+|.| .|++.|..           ...|..|+++|.++++|.|.+|++.|.+...|..|+++
T Consensus         4 ~h~~~k~~~C-~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   59 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTH-----------KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   59 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESS-----------HHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CCCCCCCEec-cCCCccCC-----------HHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH
Confidence            4667788999 99998766           47899999999999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.11  E-value=7.2e-11  Score=77.24  Aligned_cols=38  Identities=18%  Similarity=0.321  Sum_probs=32.0

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..|..|+++|++++||.|.+|++.|.+...|..|+++|
T Consensus        18 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C           18 YYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             HHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            34455555677899999999999999999999999876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=1.2e-10  Score=79.64  Aligned_cols=57  Identities=14%  Similarity=0.223  Sum_probs=45.2

Q ss_pred             ccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           23 YKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        23 ~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      -...+|.|+.|++.|..           ...|..|+++|+++++|.|.+|++.|.+...|..|+++|.
T Consensus         5 ~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSS-----------KAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CCCCSEECSSSSCEESS-----------HHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            34455666667666544           3567777778889999999999999999999999998765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.09  E-value=1.4e-10  Score=82.51  Aligned_cols=53  Identities=11%  Similarity=0.243  Sum_probs=46.9

Q ss_pred             cceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           26 DWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        26 ~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .+|.|.  .|++.+..           ...|..|+++|.++++|.|..|++.|.+...|..|+++|
T Consensus         3 k~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   57 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQ-----------SGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   57 (90)
T ss_dssp             CCEECCSSSCCCEESS-----------HHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CceECCCCCCCCccCC-----------HHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHc
Confidence            468897  59998766           478999999999999999999999999999999999864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=9.6e-11  Score=79.02  Aligned_cols=60  Identities=12%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhh-c-CCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK-N-ATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~-h-~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +.|....+|.|+.|++.|..           ...|..|+++ | ++++||.|..|+|.|.+...|..|++++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~-----------~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTH-----------ISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESS-----------HHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCC-----------HHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            45666777888888887655           4678888887 7 68999999999999999999999998863

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.6e-11  Score=87.66  Aligned_cols=63  Identities=14%  Similarity=0.111  Sum_probs=54.1

Q ss_pred             hhhhhhccccceecCccccccC-CCCccHHHHHHHHHHHHHHHhhcCC-CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           17 AEQKLHYKSDWHRYNLKRKVAG-VPGVTEALFLARQAALAQEKNKNAT-PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        17 ~~lr~H~ks~~hryNlkrkv~~-l~p~~~~~F~~k~~~l~~h~~~h~~-~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .+++.|....+|.|++|++.|. .           ...|..|+++|++ +++|.|.+|+|.|.++..|..|+++|.
T Consensus        14 ~h~~~h~~~~~~~C~~C~k~f~~~-----------~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A           14 QWQRAIHERGEAVCPTCNVVTRKT-----------LVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             HHHHTTTTTSCCCCTTTCCCCSSC-----------SHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             HHHHHhccCCCcCCCCCCCChhhh-----------HHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            3456666667899999999876 5           4789999999988 999999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=1.4e-10  Score=85.37  Aligned_cols=68  Identities=13%  Similarity=0.220  Sum_probs=55.6

Q ss_pred             hccCCchhhhhh----ccccceecCcccccc-CCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHH
Q 026761           11 REFNDDAEQKLH----YKSDWHRYNLKRKVA-GVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQH   85 (233)
Q Consensus        11 ~~F~~~~~lr~H----~ks~~hryNlkrkv~-~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H   85 (233)
                      .+|.....+..|    ....+|.|+.|++.| ..           ...|..|+++| +++||.|.+|||.|.++..|..|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~-----------~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKT-----------IEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESS-----------HHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccC-----------HHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            345555555444    445789999999987 55           47899999999 99999999999999999999999


Q ss_pred             -Hhhhh
Q 026761           86 -LNSRS   90 (233)
Q Consensus        86 -~~s~~   90 (233)
                       +++|.
T Consensus        82 ~~~~H~   87 (96)
T 2ctd_A           82 VMANHN   87 (96)
T ss_dssp             HHHHTC
T ss_pred             hHHhcC
Confidence             77653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.07  E-value=5.1e-11  Score=80.72  Aligned_cols=54  Identities=13%  Similarity=0.147  Sum_probs=47.1

Q ss_pred             CCCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCC
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPM   65 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k   65 (233)
                      .+||.|..||++|.....|+.|+++    .+|.|+.|++.|..           ...|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~-----------~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD-----------QSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS-----------HHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC-----------HHHHHHHhCccCCCC
Confidence            3799999999999999988888776    58999999999766           589999999999874

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.1e-10  Score=86.40  Aligned_cols=59  Identities=8%  Similarity=0.042  Sum_probs=51.5

Q ss_pred             chhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHh
Q 026761           16 DAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        16 ~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      .+.++.|....+|+|..|++.+..           ...|..|+++|.  ++|.|.+|++.|.+...|..|++
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~   63 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSS-----------LLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES   63 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSS-----------HHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH
T ss_pred             cccCcccCCCcCeECCCCCCccCC-----------HHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH
Confidence            456788988899999999998766           478899999984  78999999999999999999983

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=3.7e-11  Score=89.97  Aligned_cols=54  Identities=13%  Similarity=0.103  Sum_probs=36.7

Q ss_pred             cceecCccccccCCCCccHHHHHHHHHHHHHHHh-hc---CCCCccccCCCCCccCChHHHHHH-Hhhhh
Q 026761           26 DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKN-KN---ATPMTYSCGLCGKGYRSSKALAQH-LNSRS   90 (233)
Q Consensus        26 ~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~-~h---~~~k~~~C~~C~K~F~s~~~l~~H-~~s~~   90 (233)
                      .+|.|+.|++.|..           ...|..|++ +|   ++++||.|.+|||+|.++..|..| +++|.
T Consensus        17 kpy~C~~Cgk~F~~-----------~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           17 GGYECKYCTFQTPD-----------LNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             SSEECSSCSCEESC-----------HHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred             cCcCCCCCCCccCC-----------HHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence            45666666665444           356666665 36   457788888888888888888888 66653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.5e-10  Score=81.65  Aligned_cols=64  Identities=16%  Similarity=0.273  Sum_probs=48.5

Q ss_pred             hhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCC----CccccCCCCCccCChHHHHHHHhhhhh
Q 026761           17 AEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATP----MTYSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        17 ~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~----k~~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      .+++.|....+|.|+.|++.|..           ...|..|+++|.+.    ++|.|.+|++.|.+...|..|+++|.-
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~-----------~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQ-----------KQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESS-----------HHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             cccceecCCCCCcCCCCCCccCC-----------HHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence            34566666677888888887665           46788888765443    789999999999999999999887653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.7e-10  Score=80.40  Aligned_cols=63  Identities=11%  Similarity=0.139  Sum_probs=53.6

Q ss_pred             hhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHh-hcCCC-CccccCCCCCccCChHHHHHHHhhhh
Q 026761           17 AEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKN-KNATP-MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        17 ~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~-~h~~~-k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .+++.|....+|.|++|++.|..           ...|..|++ .|+++ ++|.|.+|+|.|.+...|..|++++.
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQ-----------SGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESC-----------HHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccccccCCCCCeECCCcCchhCC-----------HHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            45677777788999999998766           478999987 68775 89999999999999999999998764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=1.9e-10  Score=80.07  Aligned_cols=59  Identities=15%  Similarity=0.278  Sum_probs=47.7

Q ss_pred             hhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           21 LHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        21 ~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|....+|.|++|++.+..           ...|..|+++|+++++|.|.+|++.|.+...|..|+++|.
T Consensus        12 ~~~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   70 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSH-----------SSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT   70 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSC-----------HHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC
T ss_pred             cCCCCCCEECCCCCcccCC-----------HHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC
Confidence            4445567788888877655           4678888888889999999999999999999999998763

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=2.5e-10  Score=79.48  Aligned_cols=57  Identities=12%  Similarity=0.177  Sum_probs=51.4

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      ++|.|..|++.|.+...|+.|+++    .+|.|++|++.|..           ...|..|+++|++++||+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQ-----------RSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESS-----------HHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCC-----------HHHHHHHHHHhCCCCCCCC
Confidence            689999999999999999999887    46999999998766           4789999999999999988

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=3.7e-10  Score=74.63  Aligned_cols=35  Identities=23%  Similarity=0.599  Sum_probs=28.8

Q ss_pred             HHHHHHhhcCCCCccccCCCCCccCChHHHHHHHh
Q 026761           53 ALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      .|..|+++|++++||.|.+|++.|.+...|..|++
T Consensus        17 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A           17 HLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             HHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            34444555678899999999999999999999974

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.6e-10  Score=86.29  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=30.1

Q ss_pred             HHHHHhhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           54 LAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        54 l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      |..|+++|++++||.|.+|+|.|.+...|..|++.
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH
Confidence            45677778889999999999999999999999887

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.96  E-value=4.5e-10  Score=77.18  Aligned_cols=59  Identities=12%  Similarity=0.184  Sum_probs=49.9

Q ss_pred             hhhccccceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           20 KLHYKSDWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        20 r~H~ks~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..|.+..+|.|.  .|++.|..           ...|..|+++|+++++|.|.+||+.|.+...|..|+++|
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~-----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSR-----------SDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESS-----------HHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCCCCccCCcCCCCCCccCC-----------HHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            345555778886  58888665           478889999999999999999999999999999999876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.95  E-value=2.2e-09  Score=77.60  Aligned_cols=53  Identities=19%  Similarity=0.285  Sum_probs=46.4

Q ss_pred             cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC--CCCCccCChHHHHHHHhhh
Q 026761           26 DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        26 ~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~--~C~K~F~s~~~l~~H~~s~   89 (233)
                      .+|.|..  |++.+..           ...|..|+++|.++++|.|.  .|++.|.+...|..|+++|
T Consensus        14 ~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   70 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTK-----------SSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH   70 (100)
T ss_dssp             CCEECCSSSCCCEESC-----------HHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHH
T ss_pred             cceEcCCCCCCCcccC-----------HHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            4688886  9998766           47899999999999999996  6999999999999998753

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.95  E-value=1.2e-09  Score=76.55  Aligned_cols=52  Identities=15%  Similarity=0.220  Sum_probs=46.4

Q ss_pred             ceec--CccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--CCCccCChHHHHHHHhhh
Q 026761           27 WHRY--NLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        27 ~hry--Nlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      +|+|  +.|++.+..           ...|..|+++|+++++|.|..  |++.|.+...|..|+++|
T Consensus         1 p~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   56 (85)
T 2j7j_A            1 MYVCHFENCGKAFKK-----------HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH   56 (85)
T ss_dssp             CEECCSTTCCCEESS-----------HHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCC-----------HHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence            4778  899998766           478999999999999999998  999999999999999764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=8e-10  Score=77.81  Aligned_cols=65  Identities=15%  Similarity=0.238  Sum_probs=57.9

Q ss_pred             CCCCcccchhccCCchhhhhhccc--------cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS--------DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks--------~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      +||.|..|++.|.+...|+.|++.        .+|+|+.|++.|..           ...|..|+++|++++++.|..|+
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~-----------~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR-----------RNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESC-----------HHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCC-----------HHHHHHHHHHccCCCCcccCCCC
Confidence            689999999999999999999864        35999999998766           47899999999999999999999


Q ss_pred             CccC
Q 026761           74 KGYR   77 (233)
Q Consensus        74 K~F~   77 (233)
                      .+|.
T Consensus        83 ~~~g   86 (86)
T 1x6h_A           83 PSSG   86 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.95  E-value=2.8e-10  Score=86.73  Aligned_cols=37  Identities=24%  Similarity=0.345  Sum_probs=32.3

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..|..|+ .|++++||.|.+|||.|.+...|..|+++|
T Consensus        61 ~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H   97 (129)
T 2wbt_A           61 SYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT   97 (129)
T ss_dssp             HHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT
T ss_pred             HHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC
Confidence            5566666 578899999999999999999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.6e-10  Score=77.76  Aligned_cols=39  Identities=26%  Similarity=0.606  Sum_probs=30.9

Q ss_pred             HHHHHHHhhcCC---CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           52 AALAQEKNKNAT---PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        52 ~~l~~h~~~h~~---~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ..|..|+++|++   +++|.|.+|+|.|.+...|..|++.+.
T Consensus        21 ~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A           21 ASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             HHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            455555555553   789999999999999999999996543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.89  E-value=9.8e-10  Score=75.85  Aligned_cols=55  Identities=16%  Similarity=0.210  Sum_probs=48.8

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTY   67 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~   67 (233)
                      ++|.|..|++.|.+...|+.|+++    .+|+|++|++.|..           ...|..|+++|++++||
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR-----------PANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC-----------HHHHHHHHHHHCCSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC-----------HHHHHHHHHhcCCCCCC
Confidence            689999999999999998888876    46999999998766           47899999999999986

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=98.88  E-value=3.1e-10  Score=88.20  Aligned_cols=91  Identities=19%  Similarity=0.335  Sum_probs=65.6

Q ss_pred             CCCCcccchhccCCchhhhhhccccceecCccccccCC---CCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGV---PGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l---~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s   78 (233)
                      +++.|..|+++|.+...+..|++.++|+.|+.....+.   .|+....|.     ...+...+.+...|.|.+|++.|.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFK-----AAPAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCS-----CCSSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccC-----CCccccccCCCCCeEcCCCCCEeCC
Confidence            46789999999999999999999999998875443210   010000000     0001123456778999999999999


Q ss_pred             hHHHHHHHhhhhhhhhhhc
Q 026761           79 SKALAQHLNSRSHIMRASQ   97 (233)
Q Consensus        79 ~~~l~~H~~s~~hk~~~~~   97 (233)
                      ...|.+|.++++|+.++.+
T Consensus       106 ~~~~~~H~~gk~H~~~~~~  124 (127)
T 1zu1_A          106 PVVAESHYIGKTHIKNLRL  124 (127)
T ss_dssp             HHHHHHHHTSHHHHHHHHH
T ss_pred             HHHHHHHHCCHHHHHHHHH
Confidence            9999999999999987653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.87  E-value=5.3e-09  Score=73.98  Aligned_cols=54  Identities=19%  Similarity=0.307  Sum_probs=47.3

Q ss_pred             ccceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC--CCCCccCChHHHHHHHhhh
Q 026761           25 SDWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        25 s~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~--~C~K~F~s~~~l~~H~~s~   89 (233)
                      +..|.|..  |++.+..           ...|..|+++|.++++|.|.  .|++.|.+...|..|+++|
T Consensus         3 ~~~~~C~~~~C~~~f~~-----------~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   60 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTK-----------SSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH   60 (89)
T ss_dssp             CCCEECCSTTTCCEESS-----------HHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCC-----------HHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc
Confidence            45688988  9998766           47899999999999999997  6999999999999998754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=3.2e-09  Score=77.66  Aligned_cols=37  Identities=16%  Similarity=0.127  Sum_probs=33.4

Q ss_pred             HHHHHhhcCCCCccccCCCCCccC-ChHHHHHHHhhhh
Q 026761           54 LAQEKNKNATPMTYSCGLCGKGYR-SSKALAQHLNSRS   90 (233)
Q Consensus        54 l~~h~~~h~~~k~~~C~~C~K~F~-s~~~l~~H~~s~~   90 (233)
                      +..|+++|+++++|.|.+|+|.|. +...|..|+++|.
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~   49 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ   49 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc
Confidence            457889999999999999999999 9999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.86  E-value=2.2e-09  Score=76.53  Aligned_cols=54  Identities=11%  Similarity=0.277  Sum_probs=49.2

Q ss_pred             cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           26 DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        26 ~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .+|.|+.|++.|..           ...|..|+++|++++||.|..|++.|.+...|..|+++|.
T Consensus         2 k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            2 KPFQCRICMRNFSR-----------SDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCEECTTTCCEESC-----------HHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCccCC-----------HHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            46899999998766           4789999999999999999999999999999999998865

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=5.8e-10  Score=77.61  Aligned_cols=72  Identities=18%  Similarity=0.349  Sum_probs=59.5

Q ss_pred             HHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhhhhhhhhcCCCchhhhhhhccCCCCcCCCCCCCccccCCCCCCCC
Q 026761           55 AQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDS  134 (233)
Q Consensus        55 ~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (233)
                      .+|+++|++++||.|.+|+|.|.+...|..|++.+.. .                                         
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~-~-----------------------------------------   41 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-E-----------------------------------------   41 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS-S-----------------------------------------
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcC-C-----------------------------------------
Confidence            4578899999999999999999999999999874210 0                                         


Q ss_pred             CcccccCCcchhhhhhhccccccCCCCCCCCCCCcccCCCCCCCCCCCCcccCCCCCCCCHHHHHHHhhhhcccccCC
Q 026761          135 DDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPD  212 (233)
Q Consensus       135 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~  212 (233)
                                                                  ...+..|..|+..+.....+..||+..|+.--|.
T Consensus        42 --------------------------------------------~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A           42 --------------------------------------------NVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             --------------------------------------------SCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             --------------------------------------------CCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence                                                        0125789999999999999999999999965553

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.81  E-value=3.3e-09  Score=72.65  Aligned_cols=58  Identities=16%  Similarity=0.220  Sum_probs=47.2

Q ss_pred             hhccccceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC--CCCccCChHHHHHHHhhh
Q 026761           21 LHYKSDWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        21 ~H~ks~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      .+....+|.|..  |++.|..           ...|..|+++|++++||.|.+  |+|.|.+...|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFK-----------SSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESS-----------HHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCC-----------HHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344445678877  8887655           467888999999999999975  999999999999999865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.78  E-value=3e-09  Score=71.54  Aligned_cols=30  Identities=20%  Similarity=0.481  Sum_probs=28.0

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      ++|++++||.|..|||.|.+...|..|+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   32 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVT   32 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHH
Confidence            568999999999999999999999999986

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.76  E-value=5.2e-09  Score=78.18  Aligned_cols=62  Identities=13%  Similarity=0.103  Sum_probs=54.2

Q ss_pred             CCCCcccchhccCCchhhhhhccc--------cceecCccccccCCCCccHHHHHHHHHHHHHH-HhhcCCCCccccCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS--------DWHRYNLKRKVAGVPGVTEALFLARQAALAQE-KNKNATPMTYSCGLC   72 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks--------~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h-~~~h~~~k~~~C~~C   72 (233)
                      +||.|..|+++|.+...|+.|++.        .+|.|+.|++.|..           ...|..| +++|++++||.|.++
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~-----------~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR-----------YDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESS-----------THHHHTHHHHTSTTCCCEEEEEC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCC-----------HHHHHHHHHHhcCCCCCeeCCcc
Confidence            689999999999999999999862        37999999998766           4789999 899999999999985


Q ss_pred             CC
Q 026761           73 GK   74 (233)
Q Consensus        73 ~K   74 (233)
                      .+
T Consensus        86 ~~   87 (102)
T 2ghf_A           86 KR   87 (102)
T ss_dssp             CC
T ss_pred             cC
Confidence            44

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.74  E-value=4.2e-09  Score=72.30  Aligned_cols=32  Identities=28%  Similarity=0.527  Sum_probs=29.0

Q ss_pred             HhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        58 ~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h   37 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVH   37 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhc
Confidence            45789999999999999999999999999863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=1.6e-08  Score=72.61  Aligned_cols=52  Identities=12%  Similarity=0.156  Sum_probs=43.3

Q ss_pred             eecCccccccCCCCccHHHHHHHHHHHHHHHhh-cCCCCc--------cccCCCCCccCChHHHHHHHhhhh
Q 026761           28 HRYNLKRKVAGVPGVTEALFLARQAALAQEKNK-NATPMT--------YSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        28 hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~-h~~~k~--------~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +.|+.|++.|..           ...|..|+++ |+++++        |.|.+|+|.|.+...|..|+++|.
T Consensus        26 ~~C~~C~k~f~~-----------~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~   86 (95)
T 2ej4_A           26 RPKKSCDRTFST-----------MHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT   86 (95)
T ss_dssp             SSCCCCCCCCSS-----------HHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH
T ss_pred             CcccccccccCC-----------HHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC
Confidence            457788887655           4678888887 888877        999999999999999999999864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=6.6e-09  Score=74.62  Aligned_cols=57  Identities=14%  Similarity=0.082  Sum_probs=49.5

Q ss_pred             CCCcccchhccCCchhhhhhccc-c----c--------eecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS-D----W--------HRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks-~----~--------hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      .|.|..|++.|.+...|+.|++. +    +        |.|+.|++.|..           ...|..|+++|++++||.|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA-----------KYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSS-----------HHHHHHHHHHHHTCCCCSS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCC-----------HHHHHHHHHhcCCCCCCCC
Confidence            36799999999999999999875 2    2        899999998665           4789999999999999999


Q ss_pred             C
Q 026761           70 G   70 (233)
Q Consensus        70 ~   70 (233)
                      .
T Consensus        94 ~   94 (95)
T 2ej4_A           94 S   94 (95)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.7e-09  Score=71.53  Aligned_cols=51  Identities=18%  Similarity=0.339  Sum_probs=39.7

Q ss_pred             cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC-CCCCccCChHHHHHHHhhh
Q 026761           26 DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG-LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        26 ~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~-~C~K~F~s~~~l~~H~~s~   89 (233)
                      .+|.|+.|++.          |. + ..|..|+++ ++++||.|. .|||+|..++.|..|+++|
T Consensus         9 ~~~~C~~C~k~----------f~-~-~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            9 RTQPCTYCTKE----------FV-F-DTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CEEECSSSCCE----------EE-H-HHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCeeccccCCc----------cC-H-HHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            34556666654          33 2 566777777 889999999 9999999999999999875

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.3e-08  Score=66.24  Aligned_cols=47  Identities=11%  Similarity=-0.079  Sum_probs=36.9

Q ss_pred             hccccceecCccccccCCCCccHHHHHHHHHHHHHHHh-hcCCCCccccCCCCCccCCh
Q 026761           22 HYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKN-KNATPMTYSCGLCGKGYRSS   79 (233)
Q Consensus        22 H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~-~h~~~k~~~C~~C~K~F~s~   79 (233)
                      |....+|.|+.|++.|..           ...|..|++ +|++++||.|.+|+|.|+++
T Consensus         7 ~~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSR-----------PDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESS-----------HHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCC-----------HHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            455567777777777554           367888876 79999999999999999863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.4e-08  Score=69.31  Aligned_cols=69  Identities=16%  Similarity=0.276  Sum_probs=56.8

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhhhhhhhhcCCCchhhhhhhccCCCCcCCCCCCCccccCCCCCCCCCcccc
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWE  139 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (233)
                      +|++++||.|.+|+|.|.+...|..|+++|.-..                                              
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~----------------------------------------------   34 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETV----------------------------------------------   34 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHT----------------------------------------------
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccC----------------------------------------------
Confidence            3789999999999999999999999998754210                                              


Q ss_pred             cCCcchhhhhhhccccccCCCCCCCCCCCcccCCCCCCCCCCCCcccCCCCCCCCHHHHHHHhhhhcccccCCc
Q 026761          140 EVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV  213 (233)
Q Consensus       140 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~  213 (233)
                                                             ...++.|-.|+..+.....+..||+..|.--.|..
T Consensus        35 ---------------------------------------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A           35 ---------------------------------------AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             ---------------------------------------TTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             ---------------------------------------CCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence                                                   00357899999999999999999999998655543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=7.8e-09  Score=61.38  Aligned_cols=33  Identities=18%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|..|+|.|.+...|..|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            567899999999999999999999999999876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=3.8e-10  Score=76.96  Aligned_cols=57  Identities=16%  Similarity=0.120  Sum_probs=44.1

Q ss_pred             CCCCcccchhccCCchhhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +||.|..|++.|.+...|+.   ..+|.|+.|++.+..           ...|..|+++|++++||.|.+|
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~-----------~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQ-----------EAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSC-----------CCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc---CCCCCCCCCChhhcC-----------HHHHHHHHHhhcCCCCCCCCCC
Confidence            56888888888888877776   556888888887654           2567778888888888888887

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.64  E-value=1.3e-08  Score=69.27  Aligned_cols=55  Identities=15%  Similarity=0.155  Sum_probs=48.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTY   67 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~   67 (233)
                      ++|.|..|++.|.+...|+.|+++    .+|+|++|++.|..           ...|..|+++|++++|.
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~-----------~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQ-----------PSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESS-----------HHHHHHHHHHHHSSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCC-----------HHHHHHHHHHHhCCCCC
Confidence            689999999999999999999887    46999999998765           47899999999888764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.64  E-value=4.4e-08  Score=67.79  Aligned_cols=54  Identities=20%  Similarity=0.388  Sum_probs=47.1

Q ss_pred             cceecCc--cccccCCCCccHHHHHHHHHHHHHHHh-hcCCCCccccCC--CCCccCChHHHHHHHhhhh
Q 026761           26 DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKN-KNATPMTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        26 ~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~-~h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      .++.|..  |++.+..           ...|..|++ +|+++++|.|..  |+|.|.++..|..|+++|.
T Consensus         6 ~~~~C~~~~C~~~f~~-----------~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~   64 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSN-----------RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS   64 (79)
T ss_dssp             SSEECSSTTTCCEESS-----------HHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCCCcCccCC-----------HHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence            4577776  9998766           478999999 799999999999  9999999999999999764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.62  E-value=2.2e-08  Score=65.07  Aligned_cols=52  Identities=12%  Similarity=0.145  Sum_probs=45.4

Q ss_pred             CCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCC
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPM   65 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k   65 (233)
                      ||.|..|++.|.+...|+.|+++    .+|.|+.|++.|..           ...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKT-----------KGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESS-----------HHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcC-----------HHHHHHHHHHhcccC
Confidence            79999999999999999888876    46999999998765           478999999988765

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.4e-08  Score=62.02  Aligned_cols=34  Identities=21%  Similarity=0.463  Sum_probs=30.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT   34 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhC
Confidence            4567899999999999999999999999998753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.58  E-value=1.4e-08  Score=62.01  Aligned_cols=34  Identities=21%  Similarity=0.522  Sum_probs=30.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHA   34 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcC
Confidence            4567899999999999999999999999998753

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.9e-08  Score=62.17  Aligned_cols=34  Identities=18%  Similarity=0.425  Sum_probs=27.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA   34 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC
Confidence            4567888888888888888888888888887753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=62.18  Aligned_cols=34  Identities=21%  Similarity=0.436  Sum_probs=31.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA   36 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhc
Confidence            6778999999999999999999999999998753

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.8e-08  Score=61.52  Aligned_cols=34  Identities=18%  Similarity=0.420  Sum_probs=30.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|..|+|.|.+...|..|+++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT   35 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHH
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcC
Confidence            5678999999999999999999999999998764

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=1.9e-08  Score=61.55  Aligned_cols=34  Identities=24%  Similarity=0.610  Sum_probs=30.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcC
Confidence            5677999999999999999999999999998763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.2e-08  Score=62.49  Aligned_cols=34  Identities=21%  Similarity=0.467  Sum_probs=30.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|+++++|.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhC
Confidence            6778999999999999999999999999998753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.54  E-value=2.3e-08  Score=62.51  Aligned_cols=35  Identities=23%  Similarity=0.489  Sum_probs=30.8

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhC
Confidence            36778999999999999999999999999998763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=2.4e-08  Score=62.38  Aligned_cols=34  Identities=24%  Similarity=0.511  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT   36 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcC
Confidence            6678899999999999999999999999988753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.5e-08  Score=62.26  Aligned_cols=34  Identities=21%  Similarity=0.477  Sum_probs=30.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT   36 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTT
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhC
Confidence            6678899999999999999999999999988753

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=62.14  Aligned_cols=35  Identities=20%  Similarity=0.508  Sum_probs=29.3

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT   36 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC
Confidence            36677888899999999999999999999988753

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.4e-08  Score=61.52  Aligned_cols=34  Identities=26%  Similarity=0.516  Sum_probs=30.6

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .|+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH   35 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTT
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhc
Confidence            3677899999999999999999999999999875

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.53  E-value=3e-08  Score=61.97  Aligned_cols=33  Identities=24%  Similarity=0.523  Sum_probs=27.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH   35 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHc
Confidence            567788888888888888888888888888765

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=1.8e-08  Score=62.25  Aligned_cols=34  Identities=24%  Similarity=0.481  Sum_probs=30.6

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS   36 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcC
Confidence            6778999999999999999999999999998753

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=61.38  Aligned_cols=35  Identities=17%  Similarity=0.445  Sum_probs=31.2

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT   36 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTT
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhC
Confidence            36778999999999999999999999999998753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=62.12  Aligned_cols=35  Identities=23%  Similarity=0.536  Sum_probs=30.4

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT   36 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            36678899999999999999999999999988753

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=62.18  Aligned_cols=35  Identities=23%  Similarity=0.514  Sum_probs=29.5

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF   36 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc
Confidence            36677888999999999999999999999988753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=62.25  Aligned_cols=34  Identities=21%  Similarity=0.371  Sum_probs=30.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT   36 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence            5678899999999999999999999999998763

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.5e-08  Score=62.09  Aligned_cols=34  Identities=29%  Similarity=0.606  Sum_probs=30.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS   36 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcC
Confidence            6678899999999999999999999999998753

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.4e-08  Score=62.27  Aligned_cols=34  Identities=21%  Similarity=0.474  Sum_probs=27.8

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA   36 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC
Confidence            5667888888888888888888888888887753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.1e-08  Score=61.69  Aligned_cols=33  Identities=21%  Similarity=0.448  Sum_probs=27.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH   35 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhc
Confidence            566788888888888888888888888888765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=1.7e-08  Score=61.63  Aligned_cols=33  Identities=21%  Similarity=0.549  Sum_probs=30.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH   34 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGT
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHh
Confidence            567899999999999999999999999999875

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.52  E-value=2.7e-08  Score=62.14  Aligned_cols=33  Identities=24%  Similarity=0.499  Sum_probs=27.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH   35 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHH
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHc
Confidence            566788888888888888888888888888775

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=62.03  Aligned_cols=34  Identities=21%  Similarity=0.460  Sum_probs=27.6

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +|+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH   35 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHc
Confidence            3667788888888888888888888888888765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.2e-08  Score=62.59  Aligned_cols=34  Identities=21%  Similarity=0.478  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT   36 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhC
Confidence            6678899999999999999999999999988753

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.3e-08  Score=61.77  Aligned_cols=34  Identities=26%  Similarity=0.522  Sum_probs=26.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM   36 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC
Confidence            5567888888888888888888888888887653

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=61.96  Aligned_cols=33  Identities=24%  Similarity=0.404  Sum_probs=26.8

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH   35 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHh
Confidence            566788888888888888888888888888765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.4e-08  Score=62.42  Aligned_cols=33  Identities=18%  Similarity=0.456  Sum_probs=25.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH   35 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGT
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHh
Confidence            556677777888888888888888888887764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=62.10  Aligned_cols=35  Identities=23%  Similarity=0.535  Sum_probs=30.3

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT   36 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC
Confidence            36678899999999999999999999999998753

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=3e-08  Score=61.88  Aligned_cols=33  Identities=18%  Similarity=0.369  Sum_probs=26.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH   35 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHc
Confidence            566777888888888888888888888887764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.1e-08  Score=61.67  Aligned_cols=35  Identities=20%  Similarity=0.434  Sum_probs=30.5

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|+++++|.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT   36 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC
Confidence            36778899999999999999999999999998753

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.7e-08  Score=62.17  Aligned_cols=35  Identities=23%  Similarity=0.497  Sum_probs=30.9

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT   36 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcC
Confidence            36778999999999999999999999999998763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.2e-08  Score=61.62  Aligned_cols=34  Identities=21%  Similarity=0.491  Sum_probs=30.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT   36 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcC
Confidence            6778999999999999999999999999998764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.3e-08  Score=61.76  Aligned_cols=34  Identities=21%  Similarity=0.412  Sum_probs=30.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT   36 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcC
Confidence            5678899999999999999999999999998763

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.4e-08  Score=62.30  Aligned_cols=33  Identities=21%  Similarity=0.481  Sum_probs=28.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH   35 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            667788888999999999999999999998765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.1e-08  Score=61.79  Aligned_cols=34  Identities=21%  Similarity=0.437  Sum_probs=28.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT   36 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcC
Confidence            6677888888999999999999888988888753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=62.02  Aligned_cols=34  Identities=18%  Similarity=0.386  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT   36 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTS
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhC
Confidence            6678899999999999999999999999988753

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=61.99  Aligned_cols=33  Identities=21%  Similarity=0.565  Sum_probs=26.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH   35 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHh
Confidence            566778888888888888888888888887765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=2.5e-08  Score=61.63  Aligned_cols=34  Identities=18%  Similarity=0.415  Sum_probs=30.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA   36 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcC
Confidence            6778999999999999999999999999998753

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.6e-08  Score=62.30  Aligned_cols=34  Identities=32%  Similarity=0.629  Sum_probs=29.6

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS   36 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcC
Confidence            5677899999999999999999999999988753

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.7e-08  Score=61.52  Aligned_cols=34  Identities=29%  Similarity=0.589  Sum_probs=31.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS   36 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC
Confidence            6778999999999999999999999999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.51  E-value=2.7e-08  Score=60.66  Aligned_cols=34  Identities=32%  Similarity=0.596  Sum_probs=30.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   35 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS   35 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTT
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcC
Confidence            4567899999999999999999999999998763

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.9e-08  Score=61.92  Aligned_cols=34  Identities=24%  Similarity=0.500  Sum_probs=30.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcC
Confidence            6678899999999999999999999999988753

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.1e-08  Score=61.71  Aligned_cols=33  Identities=21%  Similarity=0.474  Sum_probs=25.8

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH   35 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhc
Confidence            566777888888888888888888888887764

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.1e-08  Score=61.72  Aligned_cols=33  Identities=24%  Similarity=0.553  Sum_probs=27.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH   35 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTT
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhc
Confidence            567788888888888888888888888888765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.1e-08  Score=61.70  Aligned_cols=33  Identities=18%  Similarity=0.342  Sum_probs=27.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHc
Confidence            567788888888888888888888888888775

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=3.7e-08  Score=58.36  Aligned_cols=32  Identities=19%  Similarity=0.616  Sum_probs=29.4

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++|++++||.|..|||.|.+...|..|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            46899999999999999999999999998864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.3e-08  Score=61.66  Aligned_cols=33  Identities=24%  Similarity=0.499  Sum_probs=25.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGT
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhc
Confidence            556677778888888888888888888887764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=61.96  Aligned_cols=35  Identities=23%  Similarity=0.449  Sum_probs=31.6

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE   36 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHH
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhC
Confidence            36778999999999999999999999999998864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.5e-08  Score=61.61  Aligned_cols=35  Identities=17%  Similarity=0.448  Sum_probs=30.9

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT   36 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGT
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcC
Confidence            36778999999999999999999999999998753

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.8e-08  Score=61.57  Aligned_cols=34  Identities=21%  Similarity=0.455  Sum_probs=28.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT   36 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC
Confidence            5667888888888888888888888888888753

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.3e-08  Score=61.68  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=25.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH   35 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTT
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHh
Confidence            556677788888888888888888888887765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.5e-08  Score=62.28  Aligned_cols=35  Identities=31%  Similarity=0.607  Sum_probs=30.6

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT   36 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhC
Confidence            36778999999999999999999999999998753

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.50  E-value=3.1e-08  Score=61.77  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=26.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH   35 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGG
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhc
Confidence            566778888888888888888888888888765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.4e-08  Score=61.59  Aligned_cols=33  Identities=18%  Similarity=0.492  Sum_probs=25.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH   35 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHT
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHc
Confidence            556777888888888888888888888887765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.7e-08  Score=62.03  Aligned_cols=33  Identities=24%  Similarity=0.523  Sum_probs=25.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH   35 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhc
Confidence            556677777888888888888888888887764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.9e-08  Score=61.82  Aligned_cols=33  Identities=21%  Similarity=0.460  Sum_probs=29.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH   35 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGT
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhc
Confidence            667889999999999999999999999998875

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.7e-08  Score=61.54  Aligned_cols=33  Identities=27%  Similarity=0.573  Sum_probs=25.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH   35 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHh
Confidence            456677778888888888888888888887764

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.2e-08  Score=61.74  Aligned_cols=34  Identities=24%  Similarity=0.523  Sum_probs=29.9

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .|+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH   35 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTT
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHh
Confidence            3667889999999999999999999999998875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.5e-08  Score=61.63  Aligned_cols=34  Identities=24%  Similarity=0.533  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT   36 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            6678899999999999999999999999988753

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=8.4e-08  Score=60.56  Aligned_cols=42  Identities=14%  Similarity=0.050  Sum_probs=31.7

Q ss_pred             hccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCC
Q 026761           22 HYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGK   74 (233)
Q Consensus        22 H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K   74 (233)
                      |....+|.|++|++.|..           ...|..|+++|++++||.|.+|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRD-----------VYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESS-----------HHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCC-----------HHHHHHHHHhcCCCCCccCCCCCC
Confidence            444556777777776554           467778888888999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3e-08  Score=61.87  Aligned_cols=34  Identities=24%  Similarity=0.507  Sum_probs=29.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT   36 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC
Confidence            5677888999999999999999999999988753

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.49  E-value=2.9e-08  Score=61.82  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=25.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH   35 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGS
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHh
Confidence            566677778888888888888888888887764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.2e-08  Score=61.65  Aligned_cols=33  Identities=24%  Similarity=0.497  Sum_probs=24.6

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH   35 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHc
Confidence            556677777777777777777777777777664

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.8e-08  Score=61.29  Aligned_cols=33  Identities=24%  Similarity=0.524  Sum_probs=26.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH   35 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhc
Confidence            566778888888888888888888888887765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=2.9e-08  Score=61.81  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=27.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH   35 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHh
Confidence            566788888888888888888888888888775

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.49  E-value=6.5e-08  Score=62.77  Aligned_cols=50  Identities=12%  Similarity=0.266  Sum_probs=41.8

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNA   62 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~   62 (233)
                      +||.|..|++.|.+...|+.|+++    .+|.|++|++.+..           ...|..|+++|.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQ-----------KTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESS-----------HHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCC-----------HHHHHHHHHHhc
Confidence            689999999999999998888875    57999999998766           478999998864

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=3.5e-08  Score=61.52  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=24.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH   35 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGG
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHh
Confidence            456677777788888888888888788777764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=2.6e-08  Score=62.27  Aligned_cols=34  Identities=24%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHT   36 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcC
Confidence            5678899999999999999999999999998754

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.49  E-value=2.1e-08  Score=65.11  Aligned_cols=38  Identities=21%  Similarity=0.440  Sum_probs=33.7

Q ss_pred             HHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           53 ALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|..|+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus        11 ~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence            35567788999999999999999999999999999864

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.49  E-value=9.4e-08  Score=62.75  Aligned_cols=52  Identities=19%  Similarity=0.324  Sum_probs=44.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHH-hhcCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEK-NKNATP   64 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~-~~h~~~   64 (233)
                      +||.|..|++.|.+...|+.|+++    .+|.|++|++.+..           ...|..|+ ++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTR-----------RDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESS-----------HHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCC-----------HHHHHHHHHHHcCCc
Confidence            589999999999999999888876    46999999998665           47899996 678765

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.1e-08  Score=61.72  Aligned_cols=34  Identities=26%  Similarity=0.582  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence            6678899999999999999999999999988753

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.6e-08  Score=61.46  Aligned_cols=33  Identities=21%  Similarity=0.538  Sum_probs=25.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH   35 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTT
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHh
Confidence            566777888888888888888888888887765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.48  E-value=3.6e-08  Score=61.37  Aligned_cols=33  Identities=24%  Similarity=0.536  Sum_probs=26.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH   35 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGG
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHh
Confidence            566778888888888888888888888887764

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.6e-08  Score=61.47  Aligned_cols=33  Identities=21%  Similarity=0.493  Sum_probs=26.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH   35 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHH
Confidence            566777888888888888888888888887765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=3.7e-08  Score=60.84  Aligned_cols=34  Identities=24%  Similarity=0.455  Sum_probs=30.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHA   36 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence            6678999999999999999999999999998753

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.6e-08  Score=61.49  Aligned_cols=33  Identities=18%  Similarity=0.463  Sum_probs=27.0

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH   35 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGG
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHc
Confidence            567788888888888888888888888888765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.3e-08  Score=61.56  Aligned_cols=34  Identities=15%  Similarity=0.429  Sum_probs=29.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT   36 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhC
Confidence            6677889999999999999999999999988753

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.9e-08  Score=61.38  Aligned_cols=34  Identities=26%  Similarity=0.574  Sum_probs=28.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT   36 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC
Confidence            5667888888888888888888888888888753

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4.2e-08  Score=58.53  Aligned_cols=31  Identities=16%  Similarity=0.413  Sum_probs=28.4

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHH-Hhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQH-LNSR   89 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H-~~s~   89 (233)
                      ++|++++||+|..|||+|.++..|..| ++.|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            468999999999999999999999999 7765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.7e-08  Score=61.49  Aligned_cols=34  Identities=24%  Similarity=0.518  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS   36 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence            4667899999999999999999999999998753

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.47  E-value=7.5e-08  Score=56.06  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=28.3

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            3789999999999999999999999998763

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.3e-08  Score=61.64  Aligned_cols=33  Identities=27%  Similarity=0.499  Sum_probs=24.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH   35 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            456677777777888888887777777777664

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.47  E-value=7.7e-08  Score=69.40  Aligned_cols=53  Identities=11%  Similarity=0.145  Sum_probs=45.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHH-hhcCCCC
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEK-NKNATPM   65 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~-~~h~~~k   65 (233)
                      ++|.|..|+++|.+...|+.|+++    .+|.|+.|++.|..           ...|..|+ ++|+++.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS-----------SPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS-----------HHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC-----------HHHHHHhCcccCcCCC
Confidence            579999999999999999998877    57999999999766           48999996 4688764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.47  E-value=1e-07  Score=69.81  Aligned_cols=55  Identities=11%  Similarity=0.082  Sum_probs=45.7

Q ss_pred             CCCCcccchhcc-CCchhhhhhcc---ccceecCccccccCCCCccHHHHHHHHHHHHHH-HhhcCCCCcc
Q 026761            2 PGLTCNSCNREF-NDDAEQKLHYK---SDWHRYNLKRKVAGVPGVTEALFLARQAALAQE-KNKNATPMTY   67 (233)
Q Consensus         2 ~~f~C~~C~~~F-~~~~~lr~H~k---s~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h-~~~h~~~k~~   67 (233)
                      ++|.|..|++.| .+...|+.|++   ..+|.|++|+|.|..           ...|..| +++|+++..|
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~-----------~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRS-----------LAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSS-----------HHHHHHHHHHHTCCCSSC
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCC-----------HHHHHHHhHHhcCCCCCC
Confidence            589999999999 89988877776   468999999998766           4789999 8889865444

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3.9e-08  Score=61.30  Aligned_cols=33  Identities=21%  Similarity=0.499  Sum_probs=24.6

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH   35 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHh
Confidence            456677777777777887777777777777764

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.3e-08  Score=61.13  Aligned_cols=33  Identities=21%  Similarity=0.510  Sum_probs=25.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH   35 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHc
Confidence            556677788888888888888888888887765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.47  E-value=8.6e-08  Score=55.99  Aligned_cols=31  Identities=16%  Similarity=0.461  Sum_probs=28.4

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|++++||.|.+|||.|.+...|..|+++|.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            4789999999999999999999999998764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=4.5e-08  Score=61.02  Aligned_cols=33  Identities=15%  Similarity=0.271  Sum_probs=25.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLH   35 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHh
Confidence            556677888888888888888888888887765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3.6e-08  Score=61.58  Aligned_cols=33  Identities=21%  Similarity=0.487  Sum_probs=24.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH   35 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHh
Confidence            556677777788888888888877787777664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.1e-08  Score=61.69  Aligned_cols=33  Identities=21%  Similarity=0.513  Sum_probs=29.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH   35 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHh
Confidence            667889999999999999999999999998875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.46  E-value=5.1e-08  Score=60.87  Aligned_cols=33  Identities=21%  Similarity=0.388  Sum_probs=24.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH   35 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            455677777777777777777777777777664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=3.9e-08  Score=61.33  Aligned_cols=33  Identities=21%  Similarity=0.530  Sum_probs=25.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH   35 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHc
Confidence            556677778888888888888888888887764

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.2e-08  Score=61.07  Aligned_cols=33  Identities=21%  Similarity=0.379  Sum_probs=25.5

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH   35 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTT
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHh
Confidence            566777888888888888888888888887764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.9e-08  Score=60.93  Aligned_cols=34  Identities=26%  Similarity=0.535  Sum_probs=26.4

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT   36 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc
Confidence            4566778888888888888888888888887653

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=5.3e-08  Score=60.78  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=27.1

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHh-hh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLN-SR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~-s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|++ +|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   36 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH   36 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhc
Confidence            5667888888888888888888888888887 65

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=6.1e-08  Score=59.91  Aligned_cols=34  Identities=29%  Similarity=0.461  Sum_probs=30.3

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHA   36 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHC
Confidence            4567899999999999999999999999998864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.1e-07  Score=59.34  Aligned_cols=44  Identities=5%  Similarity=-0.126  Sum_probs=38.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTR-----------KSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESC-----------HHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4677877888999999998766           4789999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=1e-07  Score=59.29  Aligned_cols=44  Identities=7%  Similarity=-0.188  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSD-----------HIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSS-----------HHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4677877888999999998666           4789999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.5e-08  Score=61.53  Aligned_cols=33  Identities=30%  Similarity=0.575  Sum_probs=22.9

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH   35 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhh
Confidence            455667777777777777777777777776654

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.1e-07  Score=59.19  Aligned_cols=44  Identities=5%  Similarity=-0.254  Sum_probs=38.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFIC-----------RRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESC-----------HHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4677888888999999998666           4789999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=2.6e-08  Score=61.54  Aligned_cols=34  Identities=21%  Similarity=0.507  Sum_probs=30.7

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT   36 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhC
Confidence            6678999999999999999999999999998763

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=1.3e-07  Score=58.77  Aligned_cols=44  Identities=5%  Similarity=-0.158  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSR-----------APCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSC-----------HHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCc-----------hHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.3e-07  Score=58.96  Aligned_cols=44  Identities=5%  Similarity=-0.213  Sum_probs=37.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSS-----------KSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSC-----------HHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCC-----------hHHHHHHHHHhCCCCCCCCCCC
Confidence            4677888888999999998666           4789999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=1.3e-07  Score=58.84  Aligned_cols=44  Identities=5%  Similarity=-0.144  Sum_probs=37.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQ-----------ASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSS-----------HHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCcCCCCC
Confidence            4567777788999999998666           4789999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.4e-07  Score=58.67  Aligned_cols=44  Identities=11%  Similarity=-0.087  Sum_probs=37.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQ-----------NSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSS-----------HHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCC-----------HHHHHHHhhhcCCCCCCCCCCC
Confidence            3566777788999999998666           4788999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.3e-07  Score=58.92  Aligned_cols=44  Identities=7%  Similarity=-0.209  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNR-----------RLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSS-----------HHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4677888888999999998665           4788999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=3.5e-08  Score=61.54  Aligned_cols=33  Identities=27%  Similarity=0.582  Sum_probs=27.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |+++|++++||.|.+|||.|.+...|..|+++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH   35 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGG
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            566788888888888888888888888888765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.3e-07  Score=58.90  Aligned_cols=44  Identities=9%  Similarity=-0.119  Sum_probs=38.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRH-----------NSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESS-----------HHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCC-----------hHHHHHHHhhcCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.42  E-value=1.3e-07  Score=58.73  Aligned_cols=44  Identities=5%  Similarity=-0.161  Sum_probs=37.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSL-----------KSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESS-----------HHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999998

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.2e-07  Score=56.18  Aligned_cols=32  Identities=13%  Similarity=0.335  Sum_probs=29.2

Q ss_pred             hhcCCCCccccCCCCCccCCh-HHHHHHHhhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSS-KALAQHLNSRS   90 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~-~~l~~H~~s~~   90 (233)
                      ++|++++||.|..|+|.|.+. ..|..|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            468899999999999999999 99999998864

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.6e-07  Score=58.42  Aligned_cols=44  Identities=5%  Similarity=-0.130  Sum_probs=37.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCG-----------RSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSS-----------HHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4566777778999999998666           4789999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.6e-07  Score=58.32  Aligned_cols=44  Identities=11%  Similarity=-0.111  Sum_probs=37.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQ-----------NSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSS-----------HHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4566777788999999998666           4789999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.7e-07  Score=58.36  Aligned_cols=44  Identities=5%  Similarity=-0.136  Sum_probs=37.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSH-----------RQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESS-----------HHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCC-----------HHHHHHHHHHhcCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.3e-07  Score=58.89  Aligned_cols=44  Identities=5%  Similarity=-0.198  Sum_probs=38.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNS-----------KFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESC-----------HHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCC-----------HHHHHHHHHhhCCCCCCCCCCC
Confidence            4677888888999999998766           4789999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.40  E-value=1.5e-07  Score=58.53  Aligned_cols=44  Identities=11%  Similarity=-0.055  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSR-----------NSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESS-----------HHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999988

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.6e-07  Score=55.11  Aligned_cols=31  Identities=19%  Similarity=0.394  Sum_probs=28.6

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            5889999999999999999999999998763

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.9e-07  Score=58.06  Aligned_cols=44  Identities=5%  Similarity=-0.155  Sum_probs=38.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTI-----------RSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESS-----------HHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.6e-07  Score=58.40  Aligned_cols=44  Identities=9%  Similarity=-0.143  Sum_probs=37.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRR-----------NSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESS-----------HHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            3566777788999999998666           4789999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.40  E-value=1.7e-07  Score=58.45  Aligned_cols=44  Identities=7%  Similarity=-0.170  Sum_probs=37.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQ-----------TTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSC-----------HHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998766           4789999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.5e-07  Score=58.64  Aligned_cols=44  Identities=7%  Similarity=-0.065  Sum_probs=37.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTL-----------KSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESS-----------HHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4566777788999999998666           4789999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.8e-07  Score=58.24  Aligned_cols=44  Identities=5%  Similarity=-0.161  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTK-----------KSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESS-----------HHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4566777788999999998766           4789999999999999999988

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=55.59  Aligned_cols=31  Identities=29%  Similarity=0.580  Sum_probs=28.6

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|++++||+|.+|++.|.+...|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            5889999999999999999999999998763

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.7e-07  Score=58.31  Aligned_cols=44  Identities=2%  Similarity=-0.224  Sum_probs=38.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYT-----------NSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESS-----------HHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCC-----------hHHHHHHHHHhCCCCCCCCCCC
Confidence            4677888888999999998766           4789999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.40  E-value=1e-07  Score=59.43  Aligned_cols=44  Identities=7%  Similarity=-0.184  Sum_probs=37.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSR-----------RSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSS-----------TTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4677777788999999988665           3688899999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.6e-07  Score=57.92  Aligned_cols=43  Identities=7%  Similarity=-0.137  Sum_probs=36.7

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSS-----------KSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESS-----------HHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            456777788999999998666           4788999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.39  E-value=1.9e-07  Score=58.22  Aligned_cols=44  Identities=5%  Similarity=-0.179  Sum_probs=38.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      .++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSG-----------KLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESS-----------HHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567888888999999998665           4789999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.6e-07  Score=58.49  Aligned_cols=44  Identities=9%  Similarity=-0.153  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQ-----------NSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESS-----------HHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCC-----------HHHHHHHHHHHCCCCCCCCCCC
Confidence            4566777788999999998665           4789999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.6e-07  Score=58.40  Aligned_cols=44  Identities=5%  Similarity=-0.180  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHR-----------HTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESS-----------HHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCC-----------hHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.9e-07  Score=58.00  Aligned_cols=44  Identities=5%  Similarity=-0.216  Sum_probs=37.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTW-----------KSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSS-----------HHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4566777788999999998665           4789999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.6e-07  Score=58.41  Aligned_cols=44  Identities=7%  Similarity=-0.155  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSR-----------KYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESS-----------HHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCc-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999998

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.3e-07  Score=55.57  Aligned_cols=31  Identities=13%  Similarity=0.515  Sum_probs=28.5

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            4789999999999999999999999998863

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.8e-07  Score=58.07  Aligned_cols=44  Identities=14%  Similarity=-0.108  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQ-----------SAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESS-----------HHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.38  E-value=1.8e-07  Score=58.05  Aligned_cols=44  Identities=5%  Similarity=-0.195  Sum_probs=37.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRW-----------ASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESS-----------HHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCC-----------hHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.5e-07  Score=58.50  Aligned_cols=44  Identities=7%  Similarity=-0.138  Sum_probs=38.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQ-----------KSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESS-----------HHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCc-----------hHHHHHHHHHcCCCCCCCCCCC
Confidence            4667887888999999998666           4789999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.4e-07  Score=58.85  Aligned_cols=44  Identities=7%  Similarity=-0.150  Sum_probs=37.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGD-----------NSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSS-----------HHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998665           4788999999999999999998

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.9e-07  Score=57.13  Aligned_cols=30  Identities=17%  Similarity=0.357  Sum_probs=27.7

Q ss_pred             cCCCCccccCC--CCCccCChHHHHHHHhhhh
Q 026761           61 NATPMTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        61 h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      +++++||+|..  |+|+|.+++.|..|+++|.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            67999999986  9999999999999999874

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.4e-07  Score=58.71  Aligned_cols=44  Identities=5%  Similarity=-0.176  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTD-----------RSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESS-----------HHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.8e-07  Score=58.15  Aligned_cols=44  Identities=9%  Similarity=-0.111  Sum_probs=37.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQ-----------TSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSS-----------HHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777788999999998665           4788999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.9e-07  Score=57.99  Aligned_cols=44  Identities=7%  Similarity=-0.136  Sum_probs=36.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSF-----------NSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSS-----------HHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4566777778999999998665           4788999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.6e-07  Score=58.47  Aligned_cols=44  Identities=9%  Similarity=-0.162  Sum_probs=37.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSV-----------YSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESC-----------HHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998766           4789999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=2.4e-07  Score=57.51  Aligned_cols=44  Identities=9%  Similarity=-0.069  Sum_probs=37.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGL-----------SAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESS-----------HHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            4567777788999999998666           4789999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.9e-07  Score=58.06  Aligned_cols=44  Identities=5%  Similarity=-0.133  Sum_probs=37.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQ-----------YVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESS-----------HHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777788999999998766           4789999999999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.5e-07  Score=58.65  Aligned_cols=44  Identities=5%  Similarity=-0.261  Sum_probs=38.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      .++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKR-----------RLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESS-----------HHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCC-----------HHHHHHHHHHHcCCCCCCCCCC
Confidence            4667888888999999998665           4789999999999999999998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.37  E-value=1.5e-07  Score=59.74  Aligned_cols=31  Identities=29%  Similarity=0.665  Sum_probs=27.8

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHh-hhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLN-SRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~-s~~   90 (233)
                      +|++++||.|.+|||.|.+...|..|++ +|.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            4889999999999999999999999998 653

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=1.6e-07  Score=58.57  Aligned_cols=44  Identities=9%  Similarity=-0.128  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGR-----------HSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESS-----------HHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCC-----------HHHHHHHHHHHcCCCCCCCCCC
Confidence            4566777788999999998766           4789999999999999999988

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.7e-07  Score=54.02  Aligned_cols=31  Identities=26%  Similarity=0.508  Sum_probs=28.4

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++++|.|.+|+|.|.+...|..|+++|.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            4789999999999999999999999998763

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.6e-07  Score=56.93  Aligned_cols=32  Identities=25%  Similarity=0.554  Sum_probs=28.6

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT   34 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhC
Confidence            46889999999999999999999999998753

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=2.3e-07  Score=57.73  Aligned_cols=31  Identities=23%  Similarity=0.540  Sum_probs=17.6

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++|++++||.|.+|+|.|.+...|..|+++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH   35 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHh
Confidence            3455555555666666666555555555543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.2e-07  Score=57.66  Aligned_cols=44  Identities=9%  Similarity=-0.156  Sum_probs=37.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCY-----------ISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESS-----------HHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            3566777788999999998666           4789999999999999999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=2.2e-07  Score=57.96  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=28.2

Q ss_pred             HhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        58 ~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT   36 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC
Confidence            456888999999999999999999999988753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.34  E-value=2.3e-07  Score=55.71  Aligned_cols=30  Identities=33%  Similarity=0.795  Sum_probs=26.8

Q ss_pred             cCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           61 NATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        61 h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |++++||.|.+|||.|.+.+.|..|+++|.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   30 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHR   30 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcC
Confidence            578899999999999999999999998764

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2e-07  Score=57.92  Aligned_cols=44  Identities=5%  Similarity=-0.170  Sum_probs=36.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCW-----------KSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESS-----------SHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4566777778999999998665           4788999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=3e-07  Score=57.18  Aligned_cols=44  Identities=5%  Similarity=-0.169  Sum_probs=37.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQ-----------NSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESS-----------HHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.3e-07  Score=57.78  Aligned_cols=33  Identities=27%  Similarity=0.550  Sum_probs=28.0

Q ss_pred             HhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        58 ~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +++|+++++|.|.+|+|.|.+...|..|+++|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT   36 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            356888999999999999999999999988754

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.9e-07  Score=57.29  Aligned_cols=44  Identities=5%  Similarity=-0.265  Sum_probs=37.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHh-hcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKN-KNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~-~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|++ +|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQ-----------NTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSS-----------HHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCC-----------hHHHHHHhHhhcCCCCCCCCCCC
Confidence            4567777788999999998665           478899999 8999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.8e-07  Score=57.30  Aligned_cols=44  Identities=7%  Similarity=-0.180  Sum_probs=37.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTD-----------RSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESS-----------HHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788999999998665           4789999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=1e-07  Score=59.12  Aligned_cols=33  Identities=21%  Similarity=0.531  Sum_probs=28.3

Q ss_pred             HhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        58 ~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT   36 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhC
Confidence            356889999999999999999999999988754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=98.32  E-value=1.2e-07  Score=73.04  Aligned_cols=39  Identities=23%  Similarity=0.270  Sum_probs=35.6

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhhhhhhhhcC
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQG   98 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~~   98 (233)
                      .|+|++||.|..|+|.|.+.+.|..|+++++|+.++...
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l   82 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL   82 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHh
Confidence            378999999999999999999999999999999986643

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.32  E-value=3.3e-07  Score=56.39  Aligned_cols=32  Identities=13%  Similarity=0.300  Sum_probs=28.3

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++|++++||.|..|+|.|.+...|..|+++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTH   34 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhC
Confidence            45889999999999999999999999998764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.31  E-value=7.3e-08  Score=64.60  Aligned_cols=50  Identities=8%  Similarity=0.085  Sum_probs=39.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHH
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~   81 (233)
                      +++.|....+|.|+.|++.|..          . ..|.   ++|++++||.|..|||.|....+
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~----------~-~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTD----------L-EANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEH----------H-HHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             HHHHcCCCCCccCCCCCchhcc----------H-HHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            4566777788999999998543          2 4443   78999999999999999987654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=4.2e-07  Score=56.29  Aligned_cols=29  Identities=24%  Similarity=0.650  Sum_probs=15.5

Q ss_pred             cCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           61 NATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        61 h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |++++||.|.+|+|.|.++..|..|+++|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   33 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH   33 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHc
Confidence            45555555555555555555555555543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3.4e-07  Score=56.98  Aligned_cols=44  Identities=7%  Similarity=-0.178  Sum_probs=37.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQ-----------NIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESS-----------HHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            4667877888999999998665           4789999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=1.6e-07  Score=58.43  Aligned_cols=44  Identities=5%  Similarity=-0.125  Sum_probs=39.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      .++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRY-----------GSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESS-----------HHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCC-----------hHHHHHHHHHhCCCCCCCCCCC
Confidence            5788999999999999999766           5889999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=1.8e-07  Score=58.21  Aligned_cols=44  Identities=11%  Similarity=-0.092  Sum_probs=36.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQ-----------NSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESS-----------SHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCC-----------HHHHHHHHHhcCCCCCCCCCCC
Confidence            3566777788999999988665           4788899999999999999988

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=4.3e-07  Score=53.33  Aligned_cols=31  Identities=19%  Similarity=0.534  Sum_probs=28.2

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|++++||.|..|+|.|.+...|..|+++|.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            4678999999999999999999999999863

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.1e-07  Score=57.85  Aligned_cols=44  Identities=7%  Similarity=-0.130  Sum_probs=34.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQ-----------RVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESS-----------SHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            3456666677888888887655           3678888888999999999988

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4.3e-07  Score=49.79  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=24.1

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++||.|..|||.|.+...|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            47899999999999999999999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3e-07  Score=57.23  Aligned_cols=44  Identities=7%  Similarity=-0.238  Sum_probs=35.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      ..+.|....+|.|++|++.|..           ...|..|+++|++++||.|.+|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSG-----------SYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSS-----------HHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            3566777778888888887655           4788888888999999999988

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=3.8e-07  Score=50.28  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=24.1

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++||.|..|||.|.+.+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999999876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.23  E-value=5.1e-07  Score=54.64  Aligned_cols=26  Identities=27%  Similarity=0.565  Sum_probs=24.7

Q ss_pred             cCCCCccccCCCCCccCChHHHHHHH
Q 026761           61 NATPMTYSCGLCGKGYRSSKALAQHL   86 (233)
Q Consensus        61 h~~~k~~~C~~C~K~F~s~~~l~~H~   86 (233)
                      +.+++||+|..|||+|.+++.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46899999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=5.7e-07  Score=55.65  Aligned_cols=43  Identities=5%  Similarity=-0.178  Sum_probs=38.6

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCC
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG   73 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~   73 (233)
                      ..|....+|.|+.|++.|..           ...|..|+++|+++++|.|.+||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~-----------~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKR-----------KDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSC-----------HHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCC-----------HHHHHHHHHHccCCCCCCCcCCC
Confidence            46888899999999998766           47899999999999999999997

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=7.5e-07  Score=55.37  Aligned_cols=43  Identities=5%  Similarity=-0.179  Sum_probs=37.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKT-----------KSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESS-----------HHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCC-----------HHHHHHHHHhcCCCCCCCCCC
Confidence            5677888889999999998766           478999999999999999974

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=52.06  Aligned_cols=30  Identities=27%  Similarity=0.496  Sum_probs=27.5

Q ss_pred             cCCCCccccCC--CCCccCChHHHHHHHhhhh
Q 026761           61 NATPMTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        61 h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |++++||.|.+  |||.|.+.+.|..|+++|.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            68999999995  9999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.17  E-value=8.2e-07  Score=48.88  Aligned_cols=26  Identities=27%  Similarity=0.667  Sum_probs=24.0

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++||.|..|||.|.+...|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999999876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.16  E-value=1e-06  Score=54.74  Aligned_cols=43  Identities=7%  Similarity=-0.113  Sum_probs=36.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSI-----------SSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESS-----------HHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998665           478999999999999999975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.1e-06  Score=54.44  Aligned_cols=43  Identities=12%  Similarity=-0.061  Sum_probs=36.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQ-----------KAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESS-----------HHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998665           478999999999999999975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.1e-06  Score=54.75  Aligned_cols=43  Identities=9%  Similarity=-0.068  Sum_probs=35.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      .++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRV-----------SSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSS-----------HHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCc-----------HHHHHHHHHhcCCCCCCCCCC
Confidence            4677888888999999988665           478899999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.3e-06  Score=54.03  Aligned_cols=43  Identities=5%  Similarity=-0.237  Sum_probs=35.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIK-----------KSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSS-----------HHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4566777778999999998666           478899999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.3e-06  Score=54.18  Aligned_cols=43  Identities=7%  Similarity=-0.162  Sum_probs=35.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTH-----------KTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSS-----------HHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777778999999988665           478899999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.2e-06  Score=54.37  Aligned_cols=43  Identities=5%  Similarity=-0.140  Sum_probs=36.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFAR-----------KSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESS-----------HHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998666           478999999999999999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.13  E-value=1.1e-06  Score=59.77  Aligned_cols=50  Identities=16%  Similarity=0.264  Sum_probs=42.8

Q ss_pred             CCCCcc--cchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcC
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNA   62 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~   62 (233)
                      ++|.|.  .|++.|.+...|+.|+++    .+|.|+.|++.|..           ...|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----------~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR-----------SDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC-----------HHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCC-----------HHHHHHHHHhcC
Confidence            679997  699999999999888876    57999999998766           478999998874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.4e-06  Score=53.89  Aligned_cols=43  Identities=5%  Similarity=-0.110  Sum_probs=36.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNT-----------KSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESS-----------HHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998666           478999999999999999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.4e-06  Score=54.00  Aligned_cols=43  Identities=5%  Similarity=-0.170  Sum_probs=36.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQ-----------KSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESS-----------HHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCC-----------HHHHHHHHhHhCCCCCCCCCC
Confidence            4667877788999999998665           478999999999999999974

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=1.5e-06  Score=51.51  Aligned_cols=30  Identities=20%  Similarity=0.458  Sum_probs=27.3

Q ss_pred             cCCCCccccC--CCCCccCChHHHHHHHhhhh
Q 026761           61 NATPMTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        61 h~~~k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |++++||.|.  .|+|.|.+...|..|+++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            6789999999  59999999999999998864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=1.4e-06  Score=53.87  Aligned_cols=43  Identities=9%  Similarity=-0.084  Sum_probs=36.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRA-----------RSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESS-----------HHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcC-----------HHHHHHHHHHcCCCCCCCCCC
Confidence            4567777788999999998666           478999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=1.6e-06  Score=53.73  Aligned_cols=43  Identities=9%  Similarity=-0.090  Sum_probs=35.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQ-----------NSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSS-----------HHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCC-----------HHHHHHHHHhhCCCCCCCCCC
Confidence            3566777788999999998665           478899999999999999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=1.5e-06  Score=53.99  Aligned_cols=43  Identities=7%  Similarity=-0.060  Sum_probs=35.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQ-----------SSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSS-----------HHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCC-----------HHHHHHHHHHcCCCCCCCCCC
Confidence            4567777788999999998665           478899999999999999975

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=3.2e-07  Score=61.73  Aligned_cols=53  Identities=11%  Similarity=0.020  Sum_probs=44.1

Q ss_pred             CCCCcccchhccCCchhhhhhccc---cceecC-ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS---DWHRYN-LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMT   66 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks---~~hryN-lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~   66 (233)
                      +||.|..|+++|. ...|+.|+++   .+|.|+ .|++.|..           ...|..|+++|...++
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~-----------~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVA-----------REDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEE-----------TTTHHHHHHTTSSSCC
T ss_pred             CCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCccccc-----------HHHHHHHHHhhcccCc
Confidence            6899999999999 9999999865   579999 99997544           3688999999866544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=1.7e-06  Score=59.40  Aligned_cols=31  Identities=29%  Similarity=0.525  Sum_probs=28.5

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|.+++||+|..|+|.|.++..|..|+++|.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            3678999999999999999999999999865

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.2e-06  Score=54.20  Aligned_cols=43  Identities=5%  Similarity=-0.191  Sum_probs=36.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIH-----------DSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESS-----------HHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCC-----------HHHHHHHHHhcCCCCCCCCCC
Confidence            4567777788999999998665           478999999999999999975

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.7e-06  Score=53.51  Aligned_cols=43  Identities=7%  Similarity=-0.188  Sum_probs=35.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQ-----------KSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESS-----------HHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCC-----------hHHHHHHHHhcCCCCCcCCCC
Confidence            3566777788999999998665           478899999999999999975

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.8e-06  Score=53.49  Aligned_cols=43  Identities=9%  Similarity=-0.103  Sum_probs=35.0

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQ-----------TSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSS-----------HHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCC
Confidence            4566777778899999988665           478899999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.8e-06  Score=53.55  Aligned_cols=43  Identities=5%  Similarity=-0.077  Sum_probs=35.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQ-----------SSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSS-----------HHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCC-----------HHHHHHHHHHcCCCCCCCCCC
Confidence            4567777788999999998665           478899999999999999974

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=4e-07  Score=49.49  Aligned_cols=25  Identities=36%  Similarity=0.751  Sum_probs=23.4

Q ss_pred             CccccCCCCCccCChHHHHHHHhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +||.|..|||.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899999999999999999999876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.10  E-value=1.8e-06  Score=49.94  Aligned_cols=26  Identities=23%  Similarity=0.577  Sum_probs=24.0

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|.+|||.|.+...|..|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            58999999999999999999998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=1.7e-06  Score=53.65  Aligned_cols=43  Identities=7%  Similarity=-0.132  Sum_probs=35.2

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRA-----------HSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSS-----------HHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4566777778999999988665           478899999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=2.2e-06  Score=53.37  Aligned_cols=31  Identities=23%  Similarity=0.493  Sum_probs=18.1

Q ss_pred             hhcCCCCccccC--CCCCccCChHHHHHHHhhh
Q 026761           59 NKNATPMTYSCG--LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        59 ~~h~~~k~~~C~--~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++|++++||.|.  .|+|.|.+...|..|+++|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   37 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH   37 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHh
Confidence            345556666665  5666666666666665554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=1.7e-06  Score=53.57  Aligned_cols=43  Identities=12%  Similarity=-0.072  Sum_probs=34.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQ-----------NSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSS-----------HHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCC-----------hhHHHHHhHhcCCCCCCCCCC
Confidence            3566777778899999988665           478889999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.9e-06  Score=53.56  Aligned_cols=43  Identities=9%  Similarity=-0.112  Sum_probs=35.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      .++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQ-----------ASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSS-----------HHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCC-----------hHHHHHHHHHhCCCCCCCCCC
Confidence            3567777788999999988665           478899999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2e-06  Score=53.21  Aligned_cols=43  Identities=12%  Similarity=-0.091  Sum_probs=35.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQ-----------KANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESS-----------HHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCC-----------HHHHHHHHHHcCCCCCCCCCC
Confidence            4566777788999999998665           478999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.07  E-value=2.4e-06  Score=47.01  Aligned_cols=26  Identities=19%  Similarity=0.649  Sum_probs=23.8

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..||+.|.+...|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            47999999999999999999999863

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=9e-07  Score=55.23  Aligned_cols=44  Identities=2%  Similarity=-0.224  Sum_probs=38.8

Q ss_pred             hhhhhccccceecC--ccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCC
Q 026761           18 EQKLHYKSDWHRYN--LKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLC   72 (233)
Q Consensus        18 ~lr~H~ks~~hryN--lkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C   72 (233)
                      ..+.|....+|.|.  .|++.|..           ...|..|+++|++++||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSR-----------SDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESS-----------HHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCC-----------HHHHHHHHHHhCCCCCCCCCCC
Confidence            45778888999998  89998766           4789999999999999999988

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.06  E-value=1.9e-06  Score=47.53  Aligned_cols=26  Identities=23%  Similarity=0.487  Sum_probs=23.9

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..|||.|.+...|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            58999999999999999999998864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=2e-06  Score=47.58  Aligned_cols=27  Identities=22%  Similarity=0.695  Sum_probs=24.4

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|..||+.|.+...|..|+++|.
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            478999999999999999999998763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.7e-06  Score=51.41  Aligned_cols=41  Identities=10%  Similarity=-0.070  Sum_probs=32.7

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      ++.|....+|.|++|++.|..           ...|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSD-----------NNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSS-----------HHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCC-----------HHHHHHHHHHhCCCCCCCCC
Confidence            456777778888888887655           47888899999999999884

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.7e-06  Score=52.77  Aligned_cols=43  Identities=5%  Similarity=-0.171  Sum_probs=34.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQ-----------NSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSS-----------HHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCC-----------HHHHHHHHHhcCCCCCCCCCC
Confidence            3556777778889999888665           478889999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.6e-06  Score=52.83  Aligned_cols=42  Identities=12%  Similarity=-0.131  Sum_probs=35.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQ-----------IGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSS-----------HHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCC-----------HHHHHHHHHHhCCCCCCCCC
Confidence            4567777788999999998665           47889999999999999986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.04  E-value=2.9e-06  Score=51.40  Aligned_cols=41  Identities=12%  Similarity=-0.050  Sum_probs=33.0

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNR-----------KDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESS-----------HHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCC-----------HHHHHHHHHhcCCCCCCCCC
Confidence            456777778888888888665           47888899999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2e-06  Score=53.37  Aligned_cols=43  Identities=12%  Similarity=-0.020  Sum_probs=33.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSH-----------HASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSS-----------SHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4566777778888888887655           367888888899999999864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.2e-06  Score=53.12  Aligned_cols=43  Identities=12%  Similarity=-0.113  Sum_probs=36.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVL-----------SAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESS-----------HHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998766           478999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.6e-06  Score=52.01  Aligned_cols=42  Identities=12%  Similarity=-0.120  Sum_probs=33.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRS-----------KSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSS-----------HHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCC-----------HHHHHHHhhhcCCCCCCCCC
Confidence            3566777778888888888665           47888999999999999984

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.03  E-value=2.6e-06  Score=46.24  Aligned_cols=25  Identities=32%  Similarity=0.761  Sum_probs=22.3

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ||.|..|||.|.+...|..|+++|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            6899999999999999999998763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.03  E-value=3.7e-06  Score=51.47  Aligned_cols=41  Identities=7%  Similarity=-0.177  Sum_probs=32.1

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSE-----------EASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSS-----------HHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCC-----------hHHHHHHHHhhCCCCCccCCC
Confidence            45666677888888887655           477888888999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.5e-06  Score=52.25  Aligned_cols=42  Identities=12%  Similarity=-0.040  Sum_probs=34.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSR-----------KDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSS-----------HHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCC-----------HHHHHHHHHHcCCCCCCCCC
Confidence            4567777788999999998665           47889999999999999984

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=2e-06  Score=53.40  Aligned_cols=43  Identities=12%  Similarity=-0.022  Sum_probs=34.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCC-CCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNAT-PMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~-~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSC-----------SKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESS-----------SHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCC-----------HHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777788899999888665           4788899999999 99999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.8e-06  Score=52.64  Aligned_cols=43  Identities=5%  Similarity=-0.164  Sum_probs=35.9

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTR-----------KSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESS-----------HHHHHHHHHHHTCCCBTTTBC
T ss_pred             cccccCCCCCEECcccCCccCC-----------HhHHHHHHHHcCCCCCCCCCC
Confidence            4567777788999999998666           478999999999999999963

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=9.5e-07  Score=55.52  Aligned_cols=34  Identities=18%  Similarity=0.376  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccC--CCCCccCChHHHHHHHhhhh
Q 026761           57 EKNKNATPMTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        57 h~~~h~~~k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |..+|++++||.|.  .|||.|.+...|..|+++|.
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            44568999999996  79999999999999999864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.3e-06  Score=51.74  Aligned_cols=42  Identities=12%  Similarity=0.026  Sum_probs=34.4

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNL-----------RKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESC-----------HHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCC-----------HHHHHHHHHHcCCCCCcCCC
Confidence            4566777778999999998666           47889999999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=3.1e-06  Score=52.28  Aligned_cols=43  Identities=9%  Similarity=-0.077  Sum_probs=35.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSV-----------RSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSS-----------HHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            3566777778999999998665           478899999999999999964

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=3.4e-06  Score=51.52  Aligned_cols=42  Identities=12%  Similarity=-0.020  Sum_probs=34.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNT-----------KSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESC-----------HHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCC-----------HhHHHHHHHHhCCCCCCCCC
Confidence            3556777778999999998766           47889999999999999984

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=3.3e-06  Score=46.27  Aligned_cols=26  Identities=23%  Similarity=0.418  Sum_probs=23.7

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..||+.|.+...|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            58999999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=3.9e-06  Score=46.04  Aligned_cols=26  Identities=35%  Similarity=0.620  Sum_probs=23.9

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..||+.|.+...|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            58999999999999999999999864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=2.3e-06  Score=53.06  Aligned_cols=43  Identities=12%  Similarity=-0.088  Sum_probs=35.3

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGR-----------RSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSS-----------HHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCC-----------HHHHHHHHHHhCCCCCCCCCC
Confidence            4567777788999999998665           478899999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=3.5e-06  Score=51.99  Aligned_cols=42  Identities=5%  Similarity=-0.151  Sum_probs=34.1

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL   71 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~   71 (233)
                      .+.|....+|.|+.|++.|..           ...|..|+++|++++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRA-----------KGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESS-----------HHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCC-----------hHHHHHHHHHhCCCCCCCCCC
Confidence            456777788889999888665           478889999999999999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3.9e-06  Score=51.47  Aligned_cols=42  Identities=12%  Similarity=-0.042  Sum_probs=33.8

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      .++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRH-----------SSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSS-----------HHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCC-----------HHHHHHHHHHHCCCCCCCCC
Confidence            3566777778889999888665           47888999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.96  E-value=4.4e-06  Score=50.46  Aligned_cols=40  Identities=10%  Similarity=-0.170  Sum_probs=32.9

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~-----------~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQ-----------RGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESS-----------HHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCC-----------HHHHHHHhhhcCCCCCCCC
Confidence            466777788899999888665           4788899999999999987

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.96  E-value=4.7e-06  Score=45.98  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=23.7

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..|||.|.+...|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            47999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=5.5e-06  Score=46.95  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=24.6

Q ss_pred             CCccccC--CCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|.  .|||.|.+...|..|+++|.
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            4789999  89999999999999999864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=4.3e-06  Score=50.67  Aligned_cols=40  Identities=5%  Similarity=-0.233  Sum_probs=30.1

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRH-----------LQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSS-----------HHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCC-----------HHHHHHHHHhcCCCCCCCC
Confidence            456666677888888887655           4677888888888888887

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=3e-06  Score=51.23  Aligned_cols=40  Identities=10%  Similarity=-0.132  Sum_probs=28.3

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQ-----------KGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSS-----------HHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCC-----------HHHHHHHHHHhCCCCCCCC
Confidence            455666667777777776554           3667777777888888877

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=6.3e-06  Score=49.63  Aligned_cols=39  Identities=8%  Similarity=-0.160  Sum_probs=29.3

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      +.|....+|.|++|++.|..           ...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQ-----------KGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESS-----------HHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCC-----------HHHHHHHHHHhCCCCCcCC
Confidence            34666677888888877655           4678888888888888887

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.17  E-value=1.3e-06  Score=48.61  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=24.3

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|..|||.|.+...|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            368999999999999999999998763

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.91  E-value=4.2e-06  Score=52.50  Aligned_cols=31  Identities=32%  Similarity=0.516  Sum_probs=28.0

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|+++++|.|.+|+|.|.+...|..|+++|.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHS   36 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcC
Confidence            3678899999999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=48.27  Aligned_cols=26  Identities=23%  Similarity=0.667  Sum_probs=23.6

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..|||.|.+...|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            58999999999999999999998763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.88  E-value=4e-06  Score=50.74  Aligned_cols=40  Identities=8%  Similarity=-0.275  Sum_probs=31.5

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCcccc
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC   69 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C   69 (233)
                      ++.|....+|.|+.|++.|..           ...|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQ-----------VAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESS-----------HHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCC-----------HHHHHHHHHHcCCCCCCCC
Confidence            456777778888888887655           4778888888899999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=6.9e-06  Score=57.20  Aligned_cols=30  Identities=17%  Similarity=0.300  Sum_probs=26.2

Q ss_pred             cCCCCccccCC--CCCccCChHHHHHHH-hhhh
Q 026761           61 NATPMTYSCGL--CGKGYRSSKALAQHL-NSRS   90 (233)
Q Consensus        61 h~~~k~~~C~~--C~K~F~s~~~l~~H~-~s~~   90 (233)
                      ++++|||+|..  |||+|.+++.|..|+ ++|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence            57999999975  999999999999998 4554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=5.5e-06  Score=50.70  Aligned_cols=42  Identities=14%  Similarity=0.025  Sum_probs=33.5

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQ-----------RNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESS-----------SHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCC-----------HHHHHHHhHhcCCCCCCCCC
Confidence            3556777778899999888665           46888999999999999884

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.87  E-value=7.3e-06  Score=46.14  Aligned_cols=26  Identities=27%  Similarity=0.684  Sum_probs=23.6

Q ss_pred             CccccC--CCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|.  .|||.|.+...|..|+++|.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            589998  99999999999999998863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.87  E-value=2.8e-06  Score=52.10  Aligned_cols=42  Identities=14%  Similarity=-0.057  Sum_probs=32.6

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTR-----------IFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESS-----------SHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCC-----------HHHHHHHHHHhCCCCCCCCC
Confidence            3566777778888888887655           46788888889999999884

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=2e-06  Score=60.00  Aligned_cols=59  Identities=17%  Similarity=0.150  Sum_probs=46.7

Q ss_pred             hhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           18 EQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        18 ~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|..|+++    .++.|..|++.+.            ...|..|+ .|.+++||.|..|++.|. ...|..|++++.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~------------~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS------------ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC------------HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh------------HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            45556553    5788888888752            37889999 889999999999999988 488999988643

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.81  E-value=7.8e-06  Score=45.32  Aligned_cols=25  Identities=28%  Similarity=0.771  Sum_probs=22.4

Q ss_pred             CccccCCCCCccCChHHHHHH-Hhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQH-LNSR   89 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H-~~s~   89 (233)
                      +||.|..||+.|.+...|..| +++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc
Confidence            589999999999999999999 5655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.81  E-value=8.1e-06  Score=55.31  Aligned_cols=49  Identities=10%  Similarity=0.257  Sum_probs=40.6

Q ss_pred             CCCCccc--chhccCCchhhhhhccc----cceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS----DWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKN   61 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks----~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h   61 (233)
                      ++|.|..  |+++|.+...|+.|+++    .+|.|.+  |++.|..           ...|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~-----------~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR-----------SDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESS-----------HHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCC-----------HHHHHhHhhcC
Confidence            6799998  99999999998888876    5699965  9998665           47888898765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.81  E-value=1.2e-05  Score=49.26  Aligned_cols=42  Identities=14%  Similarity=-0.105  Sum_probs=33.7

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|++|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIW-----------KSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESS-----------HHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCc-----------hHHHHHHHhHhcCCCCCCCC
Confidence            4566777778999999988665           47888999999999999873

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.79  E-value=6.1e-08  Score=65.71  Aligned_cols=52  Identities=17%  Similarity=0.173  Sum_probs=38.4

Q ss_pred             hhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           20 KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        20 r~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      +.|....+|.|+.|++.+...           ..|..       +++|.|.+||+.|.+...|..|+++|
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~-----------~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRR-----------STLSR-------RKTPMCEKCRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECC-----------CCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCC
T ss_pred             HHhCCCCCeeCCcccchhCCH-----------HHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhh
Confidence            344444679999999986431           12211       68899999999999999999998875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.78  E-value=7.5e-06  Score=59.02  Aligned_cols=33  Identities=27%  Similarity=0.507  Sum_probs=30.1

Q ss_pred             HhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        58 ~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .++|++++||.|.+|+|.|.+...|..|+++|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht   49 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN   49 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC
Confidence            456899999999999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.77  E-value=5.5e-06  Score=51.20  Aligned_cols=42  Identities=2%  Similarity=-0.209  Sum_probs=33.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~   70 (233)
                      +++.|....+|.|+.|++.|..           ...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~-----------~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSW-----------SCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESS-----------SHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCC-----------HHHHHHHHHHhCCCCCCCCC
Confidence            3456766778888888887655           36788898889999999985

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.76  E-value=1e-05  Score=52.08  Aligned_cols=48  Identities=4%  Similarity=-0.128  Sum_probs=37.0

Q ss_pred             hhccCCchhhhhh----ccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccc
Q 026761           10 NREFNDDAEQKLH----YKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYS   68 (233)
Q Consensus        10 ~~~F~~~~~lr~H----~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~   68 (233)
                      ++.|.....|..|    ....+|.|++|++.|..           ...|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~-----------~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQ-----------SRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESS-----------HHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCC-----------HHHHHHHHHHhccCCCCC
Confidence            3567766655555    44578999999998766           478999999999999873

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.76  E-value=1.2e-05  Score=44.14  Aligned_cols=26  Identities=27%  Similarity=0.738  Sum_probs=23.6

Q ss_pred             CccccC--CCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|.  .|||.|.+.+.|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.73  E-value=1.1e-06  Score=50.49  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=23.5

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..|||.|.+.+.|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            58999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.71  E-value=6.5e-06  Score=49.68  Aligned_cols=29  Identities=14%  Similarity=0.220  Sum_probs=24.9

Q ss_pred             CCCCCcccchhccCCchhhhhhccccceecCc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNL   32 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~~hryNl   32 (233)
                      .+||.|..|+++|...+.|+.|+   +|.|+.
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~---py~C~~   34 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ---AYYCSH   34 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH---HHTSTT
T ss_pred             ccCeECCCCCCccCCHhHccCcC---CeECcC
Confidence            37999999999999999999998   566653

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.71  E-value=1.6e-05  Score=51.15  Aligned_cols=30  Identities=27%  Similarity=0.641  Sum_probs=27.0

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHh-hh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLN-SR   89 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~-s~   89 (233)
                      .|++++||.|.+|+|.|.+...|..|++ +|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   36 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVH   36 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhc
Confidence            4688999999999999999999999987 44

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=97.61  E-value=3.9e-06  Score=64.35  Aligned_cols=50  Identities=22%  Similarity=0.320  Sum_probs=38.4

Q ss_pred             CCCcccCCCCCCCCHHHHHHHhhhhcccccCCcc--cccCH---HHHHHHHhccc
Q 026761          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVE--YLKDP---KGLLTYLGLKV  230 (233)
Q Consensus       181 ~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~~--ylvDl---~GLl~YL~eKI  230 (233)
                      .++.||||...+++++..+.||...|+|-|-...  +=-|.   =-||+|++.++
T Consensus        14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR~~~   68 (121)
T 1wir_A           14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKN   68 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHTC
T ss_pred             CceeEecCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeeeccc
Confidence            4689999999999999999999999999777642  22232   33667777653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.56  E-value=6.3e-05  Score=44.60  Aligned_cols=18  Identities=17%  Similarity=-0.010  Sum_probs=11.2

Q ss_pred             HHHHHHHhhcCCCCcccc
Q 026761           52 AALAQEKNKNATPMTYSC   69 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C   69 (233)
                      ..|..|+++|++++||.|
T Consensus        20 ~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A           20 QALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             HHHHHHHHTTCCSCTTTT
T ss_pred             HHHHHHHHHcCCCcccee
Confidence            455556666667777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.70  E-value=1.1e-05  Score=43.45  Aligned_cols=24  Identities=17%  Similarity=0.512  Sum_probs=22.4

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|+++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            589999999999999999999986

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.52  E-value=2e-05  Score=42.97  Aligned_cols=26  Identities=15%  Similarity=0.292  Sum_probs=23.4

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..|+++|.....|+.|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            37899999999999999999999863

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.48  E-value=2.7e-05  Score=42.44  Aligned_cols=26  Identities=23%  Similarity=0.639  Sum_probs=23.4

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ++||.|..|++.|.+...|+.|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999999873

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.45  E-value=6.1e-06  Score=54.94  Aligned_cols=29  Identities=10%  Similarity=0.439  Sum_probs=25.2

Q ss_pred             HHHHhhcCCCCccccCCCCCccCChHHHH
Q 026761           55 AQEKNKNATPMTYSCGLCGKGYRSSKALA   83 (233)
Q Consensus        55 ~~h~~~h~~~k~~~C~~C~K~F~s~~~l~   83 (233)
                      ..|+++|++++||.|..|||.|.+...|.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~   31 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ   31 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH
Confidence            35778899999999999999999887765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.44  E-value=2.4e-05  Score=42.45  Aligned_cols=26  Identities=15%  Similarity=0.367  Sum_probs=23.1

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..|+++|.....|+.|++++
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            36899999999999999999998763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.38  E-value=4.3e-05  Score=41.79  Aligned_cols=25  Identities=20%  Similarity=0.428  Sum_probs=22.6

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|++.|.....|+.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh
Confidence            5899999999999999999999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.36  E-value=5.7e-05  Score=40.62  Aligned_cols=24  Identities=21%  Similarity=0.531  Sum_probs=21.2

Q ss_pred             CCCcccchhccCCchhhhhhcccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ||.|..|++.|.+...|+.|++++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            689999999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.45  E-value=2.9e-05  Score=42.77  Aligned_cols=26  Identities=27%  Similarity=0.569  Sum_probs=23.2

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ++||.|..|+++|.+...|+.|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            47899999999999999999998873

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.32  E-value=2.8e-05  Score=44.33  Aligned_cols=25  Identities=20%  Similarity=0.483  Sum_probs=22.2

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|.....|+.|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H   25 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTA   25 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHH
Confidence            5899999999999999999998874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.41  E-value=3.5e-05  Score=42.36  Aligned_cols=25  Identities=16%  Similarity=0.421  Sum_probs=22.4

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|.....|+.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            5899999999999999999998873

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.26  E-value=5.7e-05  Score=41.17  Aligned_cols=25  Identities=32%  Similarity=0.744  Sum_probs=21.8

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|.....|+.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHh
Confidence            5899999999999999999998763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.23  E-value=6.4e-05  Score=54.02  Aligned_cols=46  Identities=7%  Similarity=-0.073  Sum_probs=37.9

Q ss_pred             hhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCCCccccCCCCCc
Q 026761           19 QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKG   75 (233)
Q Consensus        19 lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k~~~C~~C~K~   75 (233)
                      .+.|....+|.|+.|++.+..           ...|..|+++|++++||+|..|.+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~-----------~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQS-----------TAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESS-----------HHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             ccccCCCCCCcCCCCCCEeCC-----------HHHHHHHHHHhCCCCCcccchhhhH
Confidence            355667788999999998665           4789999999999999999877643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.22  E-value=0.00025  Score=40.51  Aligned_cols=24  Identities=17%  Similarity=0.386  Sum_probs=17.0

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~   24 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITL   24 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CcccCCCCCchhCCHHHHHHHHHH
Confidence            477888888888776666666554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.21  E-value=0.00014  Score=39.94  Aligned_cols=24  Identities=29%  Similarity=0.472  Sum_probs=21.6

Q ss_pred             CCCCcccchhccCCchhhhhh-ccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLH-YKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H-~ks   25 (233)
                      +||.|..|++.|.+...|+.| +++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~   25 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKI   25 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTT
T ss_pred             CCcCCcccCcccCChHHHHHHHHHH
Confidence            589999999999999999999 565

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=7.8e-05  Score=40.76  Aligned_cols=25  Identities=24%  Similarity=0.615  Sum_probs=22.3

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|.....|..|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHh
Confidence            6899999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=9.2e-05  Score=40.13  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=21.7

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            589999999999999999999876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.14  E-value=0.0001  Score=40.27  Aligned_cols=24  Identities=25%  Similarity=0.454  Sum_probs=21.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH
Confidence            579999999999999999999876

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.13  E-value=0.00015  Score=40.48  Aligned_cols=25  Identities=20%  Similarity=0.550  Sum_probs=22.3

Q ss_pred             CCCCcc--cchhccCCchhhhhhcccc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|.  .|+++|.....|+.|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHh
Confidence            589998  9999999999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.13  E-value=0.00011  Score=42.53  Aligned_cols=24  Identities=21%  Similarity=0.545  Sum_probs=17.9

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCCccCCHHHHHHHHHH
Confidence            567777777777777777777765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.12  E-value=0.00014  Score=42.26  Aligned_cols=24  Identities=29%  Similarity=0.652  Sum_probs=14.3

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|++.
T Consensus        10 k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCccCCCCCcccCcHHHHHHHHHH
Confidence            456666666666666666666554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.10  E-value=0.00026  Score=41.02  Aligned_cols=24  Identities=29%  Similarity=0.653  Sum_probs=12.2

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHH
Confidence            345555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.06  E-value=0.00021  Score=40.06  Aligned_cols=25  Identities=24%  Similarity=0.559  Sum_probs=22.7

Q ss_pred             CCCCcc--cchhccCCchhhhhhcccc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|.  .|+++|.....|+.|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            689999  8999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.04  E-value=9.1e-05  Score=44.94  Aligned_cols=24  Identities=25%  Similarity=0.408  Sum_probs=19.5

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..  |+++|...+.|+.|+++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            6788876  88888888888888776

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=9.3e-05  Score=40.19  Aligned_cols=24  Identities=25%  Similarity=0.624  Sum_probs=21.1

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHH
Confidence            578999999999999999888876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.99  E-value=0.00016  Score=41.66  Aligned_cols=24  Identities=21%  Similarity=0.440  Sum_probs=17.5

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      ++|.|..|++.|.....|+.|+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCeecCcCCCCcCchHHHHHHHHH
Confidence            567777777777777777777665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.97  E-value=0.00015  Score=41.94  Aligned_cols=24  Identities=17%  Similarity=0.400  Sum_probs=16.2

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH
Confidence            466777777777776666666655

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.96  E-value=0.00012  Score=42.25  Aligned_cols=24  Identities=17%  Similarity=0.362  Sum_probs=15.7

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH
Confidence            456677777766666666666654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.94  E-value=0.00013  Score=42.17  Aligned_cols=24  Identities=25%  Similarity=0.484  Sum_probs=17.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCEECCCCCceeCCHHHHHHHHHH
Confidence            567777777777777777777665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=96.88  E-value=0.0002  Score=44.85  Aligned_cols=24  Identities=21%  Similarity=0.649  Sum_probs=18.7

Q ss_pred             CCCCcccchhccCCchhhhhhcc-c
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYK-S   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~k-s   25 (233)
                      +||.|..|+++|.....|+.|++ +
T Consensus         6 kp~~C~~C~k~F~~~~~L~~H~~~~   30 (48)
T 3iuf_A            6 KPYACDICGKRYKNRPGLSYHYAHS   30 (48)
T ss_dssp             SCEECTTTCCEESSHHHHHHHHHHS
T ss_pred             cCEECCCcCcccCCHHHHHHHhhhh
Confidence            57788888888888877877777 5

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.88  E-value=0.00018  Score=41.84  Aligned_cols=24  Identities=17%  Similarity=0.430  Sum_probs=18.4

Q ss_pred             CCCCcccchhccCCc-hhhhhhccc
Q 026761            2 PGLTCNSCNREFNDD-AEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~-~~lr~H~ks   25 (233)
                      +||.|..|++.|... ..|+.|+++
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCeECCCCChhhccCHHHHHHHHHh
Confidence            577888888888887 777777765

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.84  E-value=0.00023  Score=48.62  Aligned_cols=24  Identities=25%  Similarity=0.488  Sum_probs=12.6

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|.....|+.|+++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhh
Confidence            455555555555555555444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.81  E-value=0.00024  Score=38.50  Aligned_cols=25  Identities=32%  Similarity=0.577  Sum_probs=22.3

Q ss_pred             CCCCcc--cchhccCCchhhhhhcccc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks~   26 (233)
                      ++|.|.  .|++.|.+...|+.|++++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            579999  9999999999999998873

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.81  E-value=0.00096  Score=46.35  Aligned_cols=37  Identities=8%  Similarity=-0.169  Sum_probs=26.5

Q ss_pred             cccceecCc--cccccCCCCccHHHHHHHHHHHHHHH-hhcCCCCccccCC
Q 026761           24 KSDWHRYNL--KRKVAGVPGVTEALFLARQAALAQEK-NKNATPMTYSCGL   71 (233)
Q Consensus        24 ks~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~-~~h~~~k~~~C~~   71 (233)
                      ..+||+|+.  |+|.|..           ...|..|+ ++|++++||.|..
T Consensus        24 GEKPYkC~~~~CgKaFsr-----------~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTI-----------QQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSS-----------HHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCCeECCCCCcChhHcC-----------HHHHHHHhhhhCCCCCCccccc
Confidence            446677754  7776555           47788886 5799999998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.79  E-value=0.0011  Score=37.76  Aligned_cols=24  Identities=25%  Similarity=0.450  Sum_probs=17.4

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|++.|.....|+.|++.
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGG
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHH
Confidence            567777777777777777777665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.79  E-value=0.0011  Score=37.61  Aligned_cols=24  Identities=21%  Similarity=0.571  Sum_probs=17.2

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      ++|.|..|++.|.....|+.|++.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCeECCCCcchhCCHHHHHHHHHH
Confidence            567777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.75  E-value=0.00018  Score=42.20  Aligned_cols=24  Identities=17%  Similarity=0.199  Sum_probs=14.8

Q ss_pred             CCCCcccchhccCCchhhhhh-ccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLH-YKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H-~ks   25 (233)
                      +||.|..|+++|.....|+.| ++.
T Consensus         8 k~~~C~~C~k~f~~~~~L~~H~~~~   32 (37)
T 2elm_A            8 HLYYCSQCHYSSITKNCLKRHVIQK   32 (37)
T ss_dssp             CEEECSSSSCEEECHHHHHHHHHHH
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHH
Confidence            456666666666666666666 443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.61  E-value=0.0012  Score=38.38  Aligned_cols=24  Identities=17%  Similarity=0.578  Sum_probs=14.6

Q ss_pred             CCCCcc--cchhccCCchhhhhhccc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|.  .|+++|.....|+.|+++
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHH
Confidence            456666  366666666666666544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.28  E-value=0.00066  Score=39.60  Aligned_cols=24  Identities=13%  Similarity=0.450  Sum_probs=17.7

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..  |+++|...+.|+.|+++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            5677873  88888877777777765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.24  E-value=0.00059  Score=52.37  Aligned_cols=27  Identities=33%  Similarity=0.534  Sum_probs=25.4

Q ss_pred             CCCCcccchhccCCchhhhhhccccce
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSDWH   28 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~~h   28 (233)
                      ++|.|..|++.|.+...|..|++++.|
T Consensus        49 kpfyC~~C~K~F~~~~~L~~H~rsK~H   75 (124)
T 1zr9_A           49 GLHRCLACARYFIDSTNLKTHFRSKDH   75 (124)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             cceEcccCcchhCCHHHHHHHHhhhhh
Confidence            589999999999999999999999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.16  E-value=0.00078  Score=46.57  Aligned_cols=33  Identities=12%  Similarity=0.158  Sum_probs=28.7

Q ss_pred             HHHHHHhhcCCCCccccCCCCCccCChHHHHHHH
Q 026761           53 ALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHL   86 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~   86 (233)
                      .|..|+++|.+.+|+.|..|++.|. .+.|..|+
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~   36 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE   36 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH
Confidence            3556888899999999999999994 88899987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.43  E-value=0.002  Score=39.81  Aligned_cols=13  Identities=0%  Similarity=-0.043  Sum_probs=6.3

Q ss_pred             HHHHHHHhhcCCC
Q 026761           52 AALAQEKNKNATP   64 (233)
Q Consensus        52 ~~l~~h~~~h~~~   64 (233)
                      ..|..|+++|+++
T Consensus        34 ~~L~~H~~~H~~e   46 (47)
T 1ncs_A           34 YNIRSHIQTHLED   46 (47)
T ss_dssp             SSHHHHHHHHTTT
T ss_pred             HHHHHHHHHccCC
Confidence            3445555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.38  E-value=0.031  Score=37.41  Aligned_cols=24  Identities=17%  Similarity=0.421  Sum_probs=21.9

Q ss_pred             ccccC--CCCCccCChHHHHHHHhhh
Q 026761           66 TYSCG--LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        66 ~~~C~--~C~K~F~s~~~l~~H~~s~   89 (233)
                      +|.|.  -|++.+.....|.+|++.+
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhcccc
Confidence            79997  9999999999999999875

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.80  E-value=0.014  Score=44.59  Aligned_cols=33  Identities=21%  Similarity=0.297  Sum_probs=29.7

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      .+++.|.+|+..|.+.+.+..|.++++|+.+..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~   62 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVR   62 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHH
Confidence            367899999999999999999999999988654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.67  E-value=0.02  Score=36.23  Aligned_cols=23  Identities=26%  Similarity=0.492  Sum_probs=21.7

Q ss_pred             CccccCCCCCccCChHHHHHHHh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      -+|.|+-|++.|+...+|++|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57899999999999999999998

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.35  E-value=0.011  Score=37.37  Aligned_cols=23  Identities=22%  Similarity=0.368  Sum_probs=21.4

Q ss_pred             CCCcccchhccCCchhhhhhccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +|.|..|++.|+....||.||+-
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            68999999999999999999983

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=93.92  E-value=0.024  Score=36.85  Aligned_cols=31  Identities=29%  Similarity=0.657  Sum_probs=28.1

Q ss_pred             cccCCCCCccCChHHHHHHHhhhhhhhhhhc
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~   97 (233)
                      -.|..|+.+|..+-+++-|+-++.|+.++..
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs~qHI~~vk~   44 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFSKQHISKVRE   44 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred             ccccccCcccccccchhhhhccHHHHHHHHH
Confidence            3799999999999999999999999987653

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.65  E-value=0.086  Score=30.56  Aligned_cols=25  Identities=20%  Similarity=0.525  Sum_probs=23.5

Q ss_pred             CcccCCCCCCCCHHHHHHHhhhhcc
Q 026761          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       183 ~~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      ..|.||.+..+++..+++|.+..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999986

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.52  E-value=0.18  Score=29.92  Aligned_cols=24  Identities=21%  Similarity=0.398  Sum_probs=21.3

Q ss_pred             CCccccCCCCCccCChHHHHHHHh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      ..++.|..|+-+|++..+|..|.+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            456889999999999999999975

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.67  E-value=0.22  Score=29.27  Aligned_cols=24  Identities=25%  Similarity=0.474  Sum_probs=21.8

Q ss_pred             ccccCCCCCccCChHHHHHHHhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .|.|++|.|.|.+...|..|-.++
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            599999999999999999998654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.57  E-value=0.11  Score=30.83  Aligned_cols=23  Identities=22%  Similarity=0.333  Sum_probs=20.4

Q ss_pred             CCCCcccchhccCCchhhhhhcc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYK   24 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~k   24 (233)
                      .++.|..|+++|.+...+..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            35789999999999999999975

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=86.13  E-value=0.17  Score=29.79  Aligned_cols=25  Identities=24%  Similarity=0.569  Sum_probs=22.3

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ..|.|..|.+.|.+...|..|+...
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhc
Confidence            3589999999999999999999764

>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A

Probab=85.89  E-value=0.46  Score=33.13  Aligned_cols=31  Identities=19%  Similarity=0.383  Sum_probs=25.2

Q ss_pred             ccccCCCCCcc--CChHHHHHHHhhhhhhhhhh
Q 026761           66 TYSCGLCGKGY--RSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        66 ~~~C~~C~K~F--~s~~~l~~H~~s~~hk~~~~   96 (233)
                      .|.|+.|+..+  .+.+..+.|.+..+|+.+..
T Consensus         3 kYyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~   35 (77)
T 3cw1_L            3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVK   35 (77)
T ss_pred             CcccccCCceecCCCHHHHHHHHccHHHHHHHH
Confidence            47899999999  34555799999999998644

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=85.15  E-value=0.96  Score=29.87  Aligned_cols=25  Identities=28%  Similarity=0.570  Sum_probs=21.8

Q ss_pred             CCccc--CCCCCCCCHHHHHHHhhhhc
Q 026761          182 PACCF--MCDLPHDAIENCMVHMHKCH  206 (233)
Q Consensus       182 ~~~Cl--fC~~~~~~~~~~~~HM~~~h  206 (233)
                      +..|.  -|+.....+..++.||+..|
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccccC
Confidence            56787  88888889999999999887

>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*

Probab=83.14  E-value=0.26  Score=44.86  Aligned_cols=32  Identities=28%  Similarity=0.448  Sum_probs=28.1

Q ss_pred             CccccCCCCC------ccCChHHHHHHHhhhhhhhhhh
Q 026761           65 MTYSCGLCGK------GYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        65 k~~~C~~C~K------~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      +.|.|.+|++      .+........|++|++|+.+..
T Consensus       359 ~~~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~  396 (409)
T 3eph_A          359 THYTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLK  396 (409)
T ss_dssp             CEEEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHH
T ss_pred             cceeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHH
Confidence            4589999998      7889999999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	233
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.01
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.7
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.7
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.62
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.3
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.29
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.16
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.12
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.11
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.1
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.06
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.04
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	98.02
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	97.92
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.91
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.9
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.8
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.77
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	97.74
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.7
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.66
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.66
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.61
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.61
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.59
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.53
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.49
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.42
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.4
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.39
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.38
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.35
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.18
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.97
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.76
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.76
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.72
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.59
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.31
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.21
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.2
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.17
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.93
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.89
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.62
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.36
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.3
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	95.29
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.27
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.21
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.19
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.06
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.02
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.9
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.8
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.54
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.34
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.22
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.88
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.82
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.33
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	93.3
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.45
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.27
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	92.24
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.92
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	91.89
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	91.73
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.24
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.14
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.09
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.34
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.96
d1zu1a2	55	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	88.91
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.39
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	88.35
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	88.16
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	87.45
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.23
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.63
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.06
d1zu1a2	55	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	80.42

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.6e-13  Score=88.26  Aligned_cols=38  Identities=21%  Similarity=0.523  Sum_probs=33.6

Q ss_pred             HHHHHHHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           52 AALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ..|..|+++|+|++||.|.+|||+|.+.+.|..|+++|
T Consensus        16 ~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          16 SQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             HHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             HHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            45566667789999999999999999999999999886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=6.5e-12  Score=75.69  Aligned_cols=33  Identities=18%  Similarity=0.388  Sum_probs=31.2

Q ss_pred             HHhhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           57 EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        57 h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |.|+|+|++||+|..|||+|.+++.|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            568899999999999999999999999999886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.5e-11  Score=72.56  Aligned_cols=32  Identities=22%  Similarity=0.538  Sum_probs=30.2

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+|+|++||+|.+|||+|..++.|..|+++|.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            57999999999999999999999999999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.4e-11  Score=74.59  Aligned_cols=35  Identities=23%  Similarity=0.547  Sum_probs=32.6

Q ss_pred             HHHhhcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           56 QEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        56 ~h~~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+++|++++||.|..|||+|...+.|..|+++|.
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            47889999999999999999999999999999873

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.2e-11  Score=69.68  Aligned_cols=31  Identities=29%  Similarity=0.554  Sum_probs=29.4

Q ss_pred             hcCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           60 KNATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        60 ~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+|++||+|..|||+|..++.|..|+++|.
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            5899999999999999999999999999984

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=8.1e-11  Score=69.74  Aligned_cols=30  Identities=17%  Similarity=0.489  Sum_probs=28.5

Q ss_pred             cCCCCccccCCCCCccCChHHHHHHHhhhh
Q 026761           61 NATPMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        61 h~~~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+|++||+|.+|+|.|.++..|.+|+++|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            789999999999999999999999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.1e-10  Score=69.61  Aligned_cols=31  Identities=16%  Similarity=0.471  Sum_probs=28.9

Q ss_pred             hhcCCCCccccCCCCCccCChHHHHHHHhhh
Q 026761           59 NKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        59 ~~h~~~k~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      ++|+|++||+|.+|||+|+.+.+|..|++.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            4799999999999999999999999998765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.6e-10  Score=60.47  Aligned_cols=26  Identities=27%  Similarity=0.618  Sum_probs=24.6

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |||+|..|||+|+.++.|.+|+++|.
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999984

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.2e-09  Score=61.27  Aligned_cols=27  Identities=19%  Similarity=0.643  Sum_probs=25.5

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ||||+|.+|||+|+.++.|.+|+++|.
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            689999999999999999999999984

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.4e-09  Score=65.78  Aligned_cols=20  Identities=10%  Similarity=0.175  Sum_probs=14.2

Q ss_pred             HHHHHHHh-hcCCCCccccCC
Q 026761           52 AALAQEKN-KNATPMTYSCGL   71 (233)
Q Consensus        52 ~~l~~h~~-~h~~~k~~~C~~   71 (233)
                      ..|+.|++ +|+|++||+|++
T Consensus        19 ~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1          19 DHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             HHHHHHHHHTSCCCCCCCSSS
T ss_pred             HHhhccCcCccCCCcCcCCcC
Confidence            44555543 589999999975

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.9e-09  Score=69.41  Aligned_cols=49  Identities=12%  Similarity=0.176  Sum_probs=41.5

Q ss_pred             CCCCCcccchhccCCchhhhhhccc----cceecCccccccCCCCccHHHHHHHHHHHHHHHhhc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS----DWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKN   61 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks----~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h   61 (233)
                      .+||+|. ||++|.....|+.|+++    .+|.|+.|++.|..           ...|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~-----------~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKM-----------KHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESS-----------SHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecC-----------HHHHHHHHhcC
Confidence            3799995 99999999887777665    68999999999766           47899999876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.62  E-value=9e-09  Score=58.19  Aligned_cols=26  Identities=19%  Similarity=0.649  Sum_probs=24.7

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|.+|||+|+..+.|.+|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            69999999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=9.5e-09  Score=58.05  Aligned_cols=26  Identities=23%  Similarity=0.612  Sum_probs=24.7

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |||.|.+|||+|.+++.|.+|+++|.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            68999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=1.5e-08  Score=63.63  Aligned_cols=36  Identities=17%  Similarity=0.439  Sum_probs=31.2

Q ss_pred             HHHHHhhcCCCCccccCC--CCCccCChHHHHHHHhhhh
Q 026761           54 LAQEKNKNATPMTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        54 l~~h~~~h~~~k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |..|+ .|++++||.|..  |||+|+..+.|..|+++|.
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            34455 489999999988  9999999999999999885

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.4e-07  Score=56.81  Aligned_cols=28  Identities=29%  Similarity=0.686  Sum_probs=25.0

Q ss_pred             CCCccccCCCCCccCChHHHHHHHh-hhh
Q 026761           63 TPMTYSCGLCGKGYRSSKALAQHLN-SRS   90 (233)
Q Consensus        63 ~~k~~~C~~C~K~F~s~~~l~~H~~-s~~   90 (233)
                      .+|||+|.+|||+|++...|..|++ +|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC
Confidence            5799999999999999999999987 454

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.7e-07  Score=53.10  Aligned_cols=26  Identities=31%  Similarity=0.609  Sum_probs=24.4

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |||.|..  |||+|.+++.|..|+++|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            6899999  9999999999999999874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.29  E-value=2e-07  Score=53.56  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=25.4

Q ss_pred             CCccccCC--CCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|..  |||+|++...|.+|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            68999999  9999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.9e-07  Score=52.97  Aligned_cols=26  Identities=23%  Similarity=0.618  Sum_probs=24.2

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |||.|..  |||+|.+++.|..|+++|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            6999988  9999999999999999874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=2.9e-07  Score=51.22  Aligned_cols=25  Identities=28%  Similarity=0.660  Sum_probs=23.8

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      +||.|..  |||+|.+...|+.|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            6899998  999999999999999987

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=4.6e-07  Score=50.86  Aligned_cols=26  Identities=23%  Similarity=0.692  Sum_probs=24.1

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |||.|..  |||+|++...|..|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            6899988  9999999999999999874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.12  E-value=3.2e-07  Score=51.55  Aligned_cols=25  Identities=32%  Similarity=0.744  Sum_probs=21.4

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|...+.|++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~H   25 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCcc
Confidence            5899999999999888888888773

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=8e-07  Score=48.19  Aligned_cols=27  Identities=19%  Similarity=0.576  Sum_probs=24.7

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|++||+.|+.+....+|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998873

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.7e-07  Score=51.21  Aligned_cols=24  Identities=17%  Similarity=0.432  Sum_probs=21.9

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|+.||++|...+.|..|.++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            699999999999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=2.3e-07  Score=51.77  Aligned_cols=26  Identities=19%  Similarity=0.501  Sum_probs=23.4

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..|+++|...+.|+.|++++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            37999999999999999999999873

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=5.8e-07  Score=50.46  Aligned_cols=25  Identities=20%  Similarity=0.498  Sum_probs=22.1

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|...+.|.+|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~H   25 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTH   25 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCcc
Confidence            6899999999999999988888874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=50.06  Aligned_cols=26  Identities=27%  Similarity=0.684  Sum_probs=23.7

Q ss_pred             CccccC--CCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCG--LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~--~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|+  -|||+|++...|..|+++|.
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            689996  59999999999999999875

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=7.3e-07  Score=59.72  Aligned_cols=34  Identities=26%  Similarity=0.357  Sum_probs=30.3

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhhhhhhhhcC
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQG   98 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~~   98 (233)
                      -.|.|..|+|.|.+.++|.+|++|++||.|+.+.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ksKkHKrrvk~L   47 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL   47 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred             CEEecccccCccCCHHHHHHHHcccHHHHHHHHh
Confidence            3489999999999999999999999999976643

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.4e-06  Score=45.80  Aligned_cols=25  Identities=24%  Similarity=0.662  Sum_probs=23.1

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |++|++|+|-|+.+..|..|+|+|.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            5789999999999999999999974

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.2e-06  Score=63.90  Aligned_cols=51  Identities=24%  Similarity=0.384  Sum_probs=41.0

Q ss_pred             CCCcccCCCCCCCCHHHHHHHhhhhcccccCCc--ccccCHH---HHHHHHhcccc
Q 026761          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV--EYLKDPK---GLLTYLGLKVP  231 (233)
Q Consensus       181 ~~~~ClfC~~~~~~~~~~~~HM~~~h~ffIP~~--~ylvDl~---GLl~YL~eKI~  231 (233)
                      .++.||||++.++++...+.||...|+|-+...  ++=.|-=   -||+|++.++.
T Consensus        14 ~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~~~~~~~LDfY~~IKLINYIR~~~~   69 (121)
T d1wira_          14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKNP   69 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHTCC
T ss_pred             ccceecccCCccCCHHHHHHHHHHhhCCCHHHHHHHcCCCccceEEEEeeeecccC
Confidence            468899999999999999999999999999874  3334433   45888887653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.4e-06  Score=47.17  Aligned_cols=28  Identities=25%  Similarity=0.710  Sum_probs=26.0

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRSHIM   93 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~hk~   93 (233)
                      ||.|..|+.+|.++..|..||+|+.|..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcccceeeeeEeeccchhHhhhhhhhcc
Confidence            7999999999999999999999998853

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=1.1e-06  Score=51.41  Aligned_cols=26  Identities=23%  Similarity=0.402  Sum_probs=22.5

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..|+++|.....|+.|++++
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CccccCCCCCCcccChHHHHHHcccc
Confidence            37899999999999999999998874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.2e-06  Score=49.78  Aligned_cols=36  Identities=6%  Similarity=0.007  Sum_probs=22.1

Q ss_pred             hhhhhccccceecCccccccCCCCccHHHHHHHHHHHHHHHhhcCCC
Q 026761           18 EQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATP   64 (233)
Q Consensus        18 ~lr~H~ks~~hryNlkrkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~   64 (233)
                      +++.|...++|.|+.|+|.|..           .+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~-----------~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSH-----------SSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSC-----------HHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeC-----------HHHHHHhCccCCCC
Confidence            3455666666666666666554           35666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=4.8e-06  Score=48.91  Aligned_cols=19  Identities=16%  Similarity=0.338  Sum_probs=13.0

Q ss_pred             HHHHHHHhhcCCCCccccC
Q 026761           52 AALAQEKNKNATPMTYSCG   70 (233)
Q Consensus        52 ~~l~~h~~~h~~~k~~~C~   70 (233)
                      ..|++|+++|+|++||+|+
T Consensus        17 ~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2          17 KHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             HHHHHHHHHHHTSCCCSCC
T ss_pred             hHhccccCeeCCCCCEeCC
Confidence            4555556667788888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.4e-06  Score=45.29  Aligned_cols=27  Identities=26%  Similarity=0.693  Sum_probs=25.3

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||.|++|+..|..+..+.-|.+||.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            589999999999999999999999984

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=3.8e-06  Score=49.65  Aligned_cols=25  Identities=28%  Similarity=0.631  Sum_probs=18.7

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..|+++|...+.|+.|++++
T Consensus        10 KPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_          10 KPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             cCeEeCCCCCEecCHHHHHHHHhcC
Confidence            6777777777777777777777663

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.9e-06  Score=47.31  Aligned_cols=25  Identities=20%  Similarity=0.456  Sum_probs=22.1

Q ss_pred             CCCCccc--chhccCCchhhhhhcccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..  |+++|...+.|+.|++++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcC
Confidence            6899998  999999999999998873

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=3.8e-06  Score=46.55  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=23.1

Q ss_pred             CCCCccc--chhccCCchhhhhhcccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..  |+++|...+.|++|++++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            6999999  999999999999999873

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.6e-05  Score=45.72  Aligned_cols=24  Identities=17%  Similarity=0.396  Sum_probs=13.1

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..||++|...+.|..|+++
T Consensus         6 kpy~C~~Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           6 KPYGCVECGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHG
T ss_pred             CCeeCCCCCCEeCchHHhHhhccc
Confidence            455555555555555555555544

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.61  E-value=9.2e-06  Score=46.39  Aligned_cols=26  Identities=23%  Similarity=0.492  Sum_probs=23.9

Q ss_pred             CCCCCccc--chhccCCchhhhhhcccc
Q 026761            1 MPGLTCNS--CNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~--C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..  |+++|...+.|++|++++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            37999998  999999999999999984

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3.8e-06  Score=47.35  Aligned_cols=24  Identities=21%  Similarity=0.512  Sum_probs=21.8

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..  |+++|...+.|+.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI   26 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccc
Confidence            6899987  99999999999999887

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.1e-05  Score=42.32  Aligned_cols=24  Identities=21%  Similarity=0.527  Sum_probs=22.1

Q ss_pred             CCCcccchhccCCchhhhhhcccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      |.+|..|++.|+..+.|++||+++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CCccchhhhHhcchhHHHHHhhcc
Confidence            678999999999999999999984

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2e-05  Score=42.36  Aligned_cols=27  Identities=30%  Similarity=0.596  Sum_probs=24.9

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      ++||+|.+|...-+..++|..|+++|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            589999999999999999999999874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=7.2e-06  Score=48.13  Aligned_cols=25  Identities=20%  Similarity=0.457  Sum_probs=19.9

Q ss_pred             CCCCCcccchhccCCchhhhhhccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      .+||.|..|+++|...+.|+.|++.
T Consensus         6 ekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           6 EKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCEeCCCCcccccchHHHHHHccc
Confidence            3688888888888888888888755

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=7.4e-06  Score=45.75  Aligned_cols=24  Identities=25%  Similarity=0.587  Sum_probs=22.3

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..  |+++|.+.+.|++|+++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            6899988  99999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=1.6e-05  Score=42.99  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=23.6

Q ss_pred             CCCCCcccchhccCCchhhhhhcccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .+||.|..||+.|..+...++|.+.+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            37999999999999999999998874

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.1e-05  Score=44.33  Aligned_cols=24  Identities=21%  Similarity=0.672  Sum_probs=13.7

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..|+++|...+.|+.|+++
T Consensus         7 kPy~C~~C~k~F~~~~~L~~H~r~   30 (36)
T d1x6ha2           7 KPYACSHCDKTFRQKQLLDMHFKR   30 (36)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCEECCCCCCCcCCHhHHHHhCcc
Confidence            455555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.40  E-value=3.5e-05  Score=45.03  Aligned_cols=28  Identities=36%  Similarity=0.904  Sum_probs=25.2

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      .+.|+|.+|+|.|.+-.+|--|+++|+.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcc
Confidence            3579999999999999999999998864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=8.2e-05  Score=43.94  Aligned_cols=30  Identities=20%  Similarity=0.524  Sum_probs=26.1

Q ss_pred             CCCCccccCCCCCccCChHHHHHHHhhhhh
Q 026761           62 ATPMTYSCGLCGKGYRSSKALAQHLNSRSH   91 (233)
Q Consensus        62 ~~~k~~~C~~C~K~F~s~~~l~~H~~s~~h   91 (233)
                      +|-+||.|.+|||.|-+..++-+|..+-.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~k   30 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCTK   30 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhhh
Confidence            477999999999999999999999866543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=4.7e-05  Score=39.50  Aligned_cols=24  Identities=33%  Similarity=0.843  Sum_probs=22.6

Q ss_pred             cccCCCCCccCChHHHHHHHhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |+|..|.++|-.+++|.+|++.||
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=2.9e-05  Score=43.90  Aligned_cols=25  Identities=20%  Similarity=0.550  Sum_probs=21.6

Q ss_pred             CCCCcc--cchhccCCchhhhhhcccc
Q 026761            2 PGLTCN--SCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~--~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|.  .|+++|...+.|+.|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~H   27 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcc
Confidence            689996  5999999999999998874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=7.9e-05  Score=43.49  Aligned_cols=24  Identities=38%  Similarity=0.789  Sum_probs=22.3

Q ss_pred             cccCC--CCCccCChHHHHHHHhhhh
Q 026761           67 YSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        67 ~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      |.|..  |||+|.++..|++|+++|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht   27 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS   27 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC
Confidence            78987  9999999999999999976

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=3.5e-05  Score=41.55  Aligned_cols=26  Identities=31%  Similarity=0.522  Sum_probs=24.7

Q ss_pred             CCCcccchhccCCchhhhhhccccce
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWH   28 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~h   28 (233)
                      ||.|..|+-+|.+...|..||+++.|
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKaH   26 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKAH   26 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhhh
Confidence            79999999999999999999999876

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00018  Score=39.19  Aligned_cols=25  Identities=32%  Similarity=0.736  Sum_probs=23.1

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      +||.|.+  |+|++...++|+.|++++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            6899998  999999999999999874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.76  E-value=7.4e-05  Score=46.23  Aligned_cols=33  Identities=3%  Similarity=-0.111  Sum_probs=17.0

Q ss_pred             hccccceecCc--cccccCCCCccHHHHHHHHHHHHHHHhhcCCCC
Q 026761           22 HYKSDWHRYNL--KRKVAGVPGVTEALFLARQAALAQEKNKNATPM   65 (233)
Q Consensus        22 H~ks~~hryNl--krkv~~l~p~~~~~F~~k~~~l~~h~~~h~~~k   65 (233)
                      |....+|.|..  |+|.|..           ...|..|+++|+|++
T Consensus        13 h~gekpy~C~~~~C~k~F~~-----------~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKR-----------RYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECS-----------SSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccC-----------chHHHhhcccccCCC
Confidence            33445555544  5555443           245555666666553

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00038  Score=36.99  Aligned_cols=24  Identities=29%  Similarity=0.544  Sum_probs=21.2

Q ss_pred             ccccCCCCCccCChHHHHHHHhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      .+.|..|||+|...+.|++|...|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvh   25 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVH   25 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGT
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcc
Confidence            357999999999999999998765

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00044  Score=36.67  Aligned_cols=26  Identities=31%  Similarity=0.556  Sum_probs=24.2

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||+|..|...-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00067  Score=37.84  Aligned_cols=15  Identities=20%  Similarity=0.275  Sum_probs=7.2

Q ss_pred             HHHHHHhhcCCCCcc
Q 026761           53 ALAQEKNKNATPMTY   67 (233)
Q Consensus        53 ~l~~h~~~h~~~k~~   67 (233)
                      .|.+|...|++++||
T Consensus        20 hlnrhklshs~ekpy   34 (35)
T d2epra1          20 HLNRHKLSHSGEKPY   34 (35)
T ss_dssp             HHHHHGGGSCSCCCC
T ss_pred             HHHhhhcccCCCCCC
Confidence            344444445555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00084  Score=37.43  Aligned_cols=26  Identities=35%  Similarity=0.595  Sum_probs=22.5

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +...|.+|||.|+..-.|.+|..||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccC
Confidence            45679999999999999999988864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0004  Score=37.79  Aligned_cols=25  Identities=20%  Similarity=0.530  Sum_probs=22.8

Q ss_pred             CCCCccc--chhccCCchhhhhhcccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks~   26 (233)
                      +||.|..  |++++..++.||.|+++.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            6899998  999999999999999873

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0014  Score=35.33  Aligned_cols=28  Identities=25%  Similarity=0.488  Sum_probs=24.9

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRSHI   92 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~hk   92 (233)
                      +||+|..|...-...+.|..|++++.-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6899999999999999999999987644

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.17  E-value=0.0018  Score=34.62  Aligned_cols=25  Identities=24%  Similarity=0.589  Sum_probs=22.4

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~   89 (233)
                      .||+|..  |+|.|+..+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899985  999999999999999876

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.93  E-value=0.0028  Score=33.06  Aligned_cols=23  Identities=26%  Similarity=0.429  Sum_probs=20.6

Q ss_pred             ccCCCCCccCChHHHHHHHhhhh
Q 026761           68 SCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        68 ~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +|+.|.|+|-++-.|..|.+.|.
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999988663

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.001  Score=36.51  Aligned_cols=25  Identities=24%  Similarity=0.596  Sum_probs=21.8

Q ss_pred             CccccCC--CCCccCChHHHHHHH-hhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHL-NSR   89 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~-~s~   89 (233)
                      +||.|..  |+|+|+..+.-..|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            6899998  999999999988886 655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.62  E-value=0.003  Score=34.59  Aligned_cols=22  Identities=32%  Similarity=0.901  Sum_probs=20.3

Q ss_pred             ccccCCCCCccCChHHHHHHHh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      ||.|.+|++.|+.+.-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            7999999999999999998875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.001  Score=35.65  Aligned_cols=25  Identities=32%  Similarity=0.618  Sum_probs=22.4

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      ..|+|..|...|...-.||.||-++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvsh   27 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSH   27 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecc
Confidence            4699999999999999999999773

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.36  E-value=0.0028  Score=34.72  Aligned_cols=26  Identities=23%  Similarity=0.434  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCCCHHHHHHHhhhhcc
Q 026761          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       182 ~~~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      |+.|.+|+..+...+.+|+|..+-||
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            57899999999999999999999997

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.30  E-value=0.0049  Score=31.66  Aligned_cols=22  Identities=27%  Similarity=0.709  Sum_probs=20.8

Q ss_pred             ccccCCCCCccCChHHHHHHHh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      ||+|..|...|-.+..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.00078  Score=44.51  Aligned_cols=27  Identities=33%  Similarity=0.587  Sum_probs=25.2

Q ss_pred             CCCcccchhccCCchhhhhhcccccee
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSDWHR   29 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~~hr   29 (233)
                      .|.|..|++.|.+...|..|++++.|+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksKkHK   41 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSKDHK   41 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCHHHH
T ss_pred             EEecccccCccCCHHHHHHHHcccHHH
Confidence            489999999999999999999999884

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0058  Score=37.04  Aligned_cols=25  Identities=36%  Similarity=0.757  Sum_probs=22.3

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      .|.|.+|||.|...+.|++|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999987664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0068  Score=32.30  Aligned_cols=24  Identities=25%  Similarity=0.654  Sum_probs=22.5

Q ss_pred             cccCCCCCccCChHHHHHHHhhhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      |.|..||......+-|+.|+++|.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            789999999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0018  Score=35.22  Aligned_cols=25  Identities=20%  Similarity=0.454  Sum_probs=22.0

Q ss_pred             CCCCCcccchhccCCchhhhhhccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      .+||.|..|+..|...+-...|.++
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeec
Confidence            3799999999999999888888776

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.19  E-value=0.002  Score=33.14  Aligned_cols=22  Identities=23%  Similarity=0.587  Sum_probs=20.1

Q ss_pred             CCCcccchhccCCchhhhhhcc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYK   24 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~k   24 (233)
                      ||+|..|..+|-....|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0089  Score=32.04  Aligned_cols=26  Identities=19%  Similarity=0.396  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCCCHHHHHHHhhhhcc
Q 026761          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       182 ~~~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      |.+|.+|.+.+.+...+..|....||
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            78999999999999999999999998

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0053  Score=34.40  Aligned_cols=22  Identities=27%  Similarity=0.822  Sum_probs=19.6

Q ss_pred             ccccCCCCCccCChHHHHHHHh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      .|.|..|||.|..++.+.+|.-
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            5899999999999999988854

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0034  Score=33.24  Aligned_cols=22  Identities=23%  Similarity=0.531  Sum_probs=14.2

Q ss_pred             CCcccchhccCCchhhhhhccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      ..|..||++|..++.|++|.-.
T Consensus         3 hvc~ecgkaf~essklkrh~lv   24 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLV   24 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGG
T ss_pred             chHHHHhHHHHHHHHHHHHhhc
Confidence            3577777777766666666543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.92  E-value=0.011  Score=31.51  Aligned_cols=27  Identities=22%  Similarity=0.619  Sum_probs=24.4

Q ss_pred             CCccccCCCCCccCChHHHHHHHhhhh
Q 026761           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        64 ~k~~~C~~C~K~F~s~~~l~~H~~s~~   90 (233)
                      +..|.|.+|...|...-.|+.|+-||.
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            456899999999999999999999874

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.01  Score=34.15  Aligned_cols=26  Identities=23%  Similarity=0.531  Sum_probs=20.3

Q ss_pred             CCCccccC--CCCCccCChHHHHHHHhh
Q 026761           63 TPMTYSCG--LCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        63 ~~k~~~C~--~C~K~F~s~~~l~~H~~s   88 (233)
                      .+|||.|.  =|+.+|.+...|..|.+.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh
Confidence            58999995  599999998766666543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0037  Score=33.22  Aligned_cols=25  Identities=16%  Similarity=0.446  Sum_probs=21.0

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +||+|..|..+-++++.|..|.+++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~h   26 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSH   26 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTC
T ss_pred             CcceeeecccccCCchheEEeeecc
Confidence            6899999988888888888888773

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.63  E-value=0.0037  Score=36.17  Aligned_cols=25  Identities=28%  Similarity=0.513  Sum_probs=22.1

Q ss_pred             CCCCcccchhccCCchhhhhhcccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      +.|.|..|++.|.+...|=-||+.+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CccCCCCCCCccCCcccccchHhhh
Confidence            5689999999999999998888874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0065  Score=32.50  Aligned_cols=26  Identities=35%  Similarity=0.599  Sum_probs=24.3

Q ss_pred             CCcccCCCCCCCCHHHHHHHhhhhcc
Q 026761          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (233)
Q Consensus       182 ~~~ClfC~~~~~~~~~~~~HM~~~h~  207 (233)
                      |+.|-||.........+.+||.+.||
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            78999999888899999999999998

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.014  Score=31.20  Aligned_cols=24  Identities=17%  Similarity=0.580  Sum_probs=21.5

Q ss_pred             CccccCCCCCccCChHHHHHHHhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      +||+|..|...-.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999999999999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.25  E-value=0.013  Score=31.24  Aligned_cols=26  Identities=27%  Similarity=0.612  Sum_probs=22.4

Q ss_pred             CccccCC--CCCccCChHHHHHHHhhhh
Q 026761           65 MTYSCGL--CGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        65 k~~~C~~--C~K~F~s~~~l~~H~~s~~   90 (233)
                      +||.|..  |.|.|.+.-.|.+|..+|.
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            5788875  9999999999999988764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.0054  Score=35.90  Aligned_cols=25  Identities=24%  Similarity=0.404  Sum_probs=21.8

Q ss_pred             CCCCCcccchhccCCchhhhhhccc
Q 026761            1 MPGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         1 ~~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      .+||.|+.|++.|-..+.+.+|..+
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhhh
Confidence            3799999999999999999888654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.016  Score=30.52  Aligned_cols=24  Identities=25%  Similarity=0.338  Sum_probs=22.0

Q ss_pred             ccccCCCCCccCChHHHHHHHhhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s~   89 (233)
                      |-+|..|+.+.+++.+|+.|.|.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            457999999999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.0061  Score=33.29  Aligned_cols=24  Identities=17%  Similarity=0.634  Sum_probs=20.0

Q ss_pred             CCCCccc--chhccCCchhhhhhc-cc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHY-KS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~-ks   25 (233)
                      +||.|..  |.++|.+++.--.|. ++
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRT   27 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRT   27 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             CCccccCCChhhhhcchhhhhhhcccc
Confidence            6899998  999999998777774 44

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.82  E-value=0.02  Score=29.96  Aligned_cols=22  Identities=32%  Similarity=0.687  Sum_probs=19.3

Q ss_pred             ccccCCCCCccCChHHHHHHHh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      ||+|.-|||-+-.+..|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999988888854

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.33  E-value=0.023  Score=31.41  Aligned_cols=23  Identities=26%  Similarity=0.583  Sum_probs=20.4

Q ss_pred             CccccCCCCCccCChHHHHHHHh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      ..|.|..||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35899999999999999999974

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.018  Score=34.75  Aligned_cols=31  Identities=29%  Similarity=0.657  Sum_probs=28.2

Q ss_pred             cccCCCCCccCChHHHHHHHhhhhhhhhhhc
Q 026761           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~~   97 (233)
                      -.|..|+..|+.+.+.+-|+-|+.|..++..
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiFskqHI~~Vk~   37 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIFSKQHISKVRE   37 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred             ccCcccceeeeeecchHhhhhhHHHHHHHHH
Confidence            5799999999999999999999999987654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.45  E-value=0.014  Score=30.67  Aligned_cols=24  Identities=17%  Similarity=0.439  Sum_probs=18.8

Q ss_pred             CCCCcccchhccCCchhhhhhccc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      +||+|..|..+-.+.+.|..|.+.
T Consensus         2 kp~kck~cdyaaadsssl~kh~ri   25 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRI   25 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhhhc
Confidence            678888888888777777777765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.27  E-value=0.047  Score=27.94  Aligned_cols=22  Identities=23%  Similarity=0.664  Sum_probs=20.4

Q ss_pred             cccCCCCCccCChHHHHHHHhh
Q 026761           67 YSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        67 ~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      |.|+.|=|.|..+..+..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.018  Score=30.64  Aligned_cols=23  Identities=17%  Similarity=0.417  Sum_probs=16.4

Q ss_pred             CCcccchhccCCchhhhhhcccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      |.|..||+.-.-++.|+.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsH   24 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTH   24 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             ccccccCcccCCHHHHHHHHHHh
Confidence            67777877777777777776663

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.92  E-value=0.028  Score=31.03  Aligned_cols=22  Identities=18%  Similarity=0.452  Sum_probs=20.0

Q ss_pred             CCCcccchhccCCchhhhhhcc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYK   24 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~k   24 (233)
                      .|.|.-||+.|.+.+.|..|..
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5899999999999999999864

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=91.89  E-value=0.032  Score=28.51  Aligned_cols=22  Identities=23%  Similarity=0.585  Sum_probs=16.9

Q ss_pred             CCcccchhccCCchhhhhhccc
Q 026761            4 LTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         4 f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      |+|-.|.++|...+.|.+|.+.
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            6788888888887777777665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.73  E-value=0.015  Score=33.36  Aligned_cols=24  Identities=17%  Similarity=0.588  Sum_probs=21.3

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      +||.|..  |+..|.+.++|..|.+-
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhhhh
Confidence            7999965  99999999999999765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.031  Score=33.74  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=20.0

Q ss_pred             CCCcccchhccCCchhhhhhccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      .|.|-.|+|.|....-||.|-..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHh
Confidence            47899999999999999998754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.14  E-value=0.043  Score=30.62  Aligned_cols=27  Identities=22%  Similarity=0.561  Sum_probs=22.6

Q ss_pred             CCCCccccCCCCCccCChHHHHHHHhh
Q 026761           62 ATPMTYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        62 ~~~k~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      .|+..|.|.+|.+.+..-+.+-+|--+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            356679999999999999999998644

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.09  E-value=0.027  Score=29.83  Aligned_cols=24  Identities=25%  Similarity=0.456  Sum_probs=20.9

Q ss_pred             CCCCccc--chhccCCchhhhhhccc
Q 026761            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (233)
Q Consensus         2 ~~f~C~~--C~~~F~~~~~lr~H~ks   25 (233)
                      .||.|.-  |++.|..++-|++|-+.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            5888875  99999999999999775

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.34  E-value=0.11  Score=26.99  Aligned_cols=20  Identities=30%  Similarity=0.581  Sum_probs=17.9

Q ss_pred             CCCCccCChHHHHHHHhhhh
Q 026761           71 LCGKGYRSSKALAQHLNSRS   90 (233)
Q Consensus        71 ~C~K~F~s~~~l~~H~~s~~   90 (233)
                      -|+|.|...+.|+.|+-+|.
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            49999999999999998874

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.96  E-value=0.13  Score=26.83  Aligned_cols=23  Identities=22%  Similarity=0.482  Sum_probs=21.0

Q ss_pred             ccccCCCCCccCChHHHHHHHhh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLNS   88 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~s   88 (233)
                      .|+|+.|+.-...++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48899999999999999999974

>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=88.91  E-value=0.13  Score=31.87  Aligned_cols=32  Identities=19%  Similarity=0.408  Sum_probs=27.5

Q ss_pred             CccccCCCCCccCChHHHHHHHhhhhhhhhhh
Q 026761           65 MTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (233)
Q Consensus        65 k~~~C~~C~K~F~s~~~l~~H~~s~~hk~~~~   96 (233)
                      +-..|.+|+..|++...-..|-.-++|..+..
T Consensus        20 ~nk~C~lCn~~Fns~~~AqsHY~GK~H~K~lk   51 (55)
T d1zu1a2          20 RSKCCPVCNMTFSSPVVAESHYIGKTHIKNLR   51 (55)
T ss_dssp             TTTEETTTTEECSSHHHHHHHHTSHHHHHHHH
T ss_pred             chhhhhhhhcccCCHHHHHHHhhhhHHHHHHH
Confidence            34469999999999999999999999987643

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.16  Score=26.85  Aligned_cols=22  Identities=32%  Similarity=0.693  Sum_probs=19.5

Q ss_pred             ccccCCCCCccCChHHHHHHHh
Q 026761           66 TYSCGLCGKGYRSSKALAQHLN   87 (233)
Q Consensus        66 ~~~C~~C~K~F~s~~~l~~H~~   87 (233)
                      .|.|..|||...+...++-|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEe
Confidence            4889999999999999988864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.35  E-value=0.084  Score=27.50  Aligned_cols=21  Identities=14%  Similarity=0.358  Sum_probs=17.5

Q ss_pred             CCCcccchhccCCchhhhhhc
Q 026761            3 GLTCNSCNREFNDDAEQKLHY   23 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~   23 (233)
                      ||.|..||+.+-....|-.|-
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            789999999988888777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.16  E-value=0.064  Score=27.73  Aligned_cols=21  Identities=24%  Similarity=0.627  Sum_probs=16.7

Q ss_pred             CcccchhccCCchhhhhhccc
Q 026761            5 TCNSCNREFNDDAEQKLHYKS   25 (233)
Q Consensus         5 ~C~~C~~~F~~~~~lr~H~ks   25 (233)
                      .|.+|.+.|.+...|+.|-+.
T Consensus         2 qcp~c~k~f~skyylkvhnr~   22 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRK   22 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhcccc
Confidence            689999999888877777554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.45  E-value=0.065  Score=29.79  Aligned_cols=23  Identities=17%  Similarity=0.537  Sum_probs=19.2

Q ss_pred             CCCCcccchhccCCchhhhhhcc
Q 026761            2 PGLTCNSCNREFNDDAEQKLHYK   24 (233)
Q Consensus         2 ~~f~C~~C~~~F~~~~~lr~H~k   24 (233)
                      ..|.|..|+++|..+....+|--
T Consensus         3 ~afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             ceeeecccccchhcchHHHHHhh
Confidence            35889999999999988887753

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.17  Score=26.45  Aligned_cols=19  Identities=32%  Similarity=0.639  Sum_probs=17.1

Q ss_pred             CCCCccCChHHHHHHHhhh
Q 026761           71 LCGKGYRSSKALAQHLNSR   89 (233)
Q Consensus        71 ~C~K~F~s~~~l~~H~~s~   89 (233)
                      -|+|-|+..++++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3999999999999999876

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.63  E-value=0.2  Score=26.48  Aligned_cols=24  Identities=25%  Similarity=0.545  Sum_probs=20.8

Q ss_pred             CCCcccchhccCCchhhhhhcccc
Q 026761            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (233)
Q Consensus         3 ~f~C~~C~~~F~~~~~lr~H~ks~   26 (233)
                      .|+|.-||++..+....+.|.-.+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEeec
Confidence            599999999999999988887554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.06  E-value=0.41  Score=30.53  Aligned_cols=30  Identities=30%  Similarity=0.535  Sum_probs=26.2

Q ss_pred             CCCccccCCCCCccCChHHHHHHHhhhhhh
Q 026761           63 TPMTYSCGLCGKGYRSSKALAQHLNSRSHI   92 (233)
Q Consensus        63 ~~k~~~C~~C~K~F~s~~~l~~H~~s~~hk   92 (233)
                      +...|+|..|.-.|-+...|..|+.+|..-
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            345699999999999999999999998753

>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=80.42  E-value=0.076  Score=33.02  Aligned_cols=29  Identities=31%  Similarity=0.558  Sum_probs=24.4

Q ss_pred             CcccchhccCCchhhhhhccccceecCcc
Q 026761            5 TCNSCNREFNDDAEQKLHYKSDWHRYNLK   33 (233)
Q Consensus         5 ~C~~C~~~F~~~~~lr~H~ks~~hryNlk   33 (233)
                      .|..|+.+|.+...-..||.-+.|.-|++
T Consensus        23 ~C~lCn~~Fns~~~AqsHY~GK~H~K~lk   51 (55)
T d1zu1a2          23 CCPVCNMTFSSPVVAESHYIGKTHIKNLR   51 (55)
T ss_dssp             EETTTTEECSSHHHHHHHHTSHHHHHHHH
T ss_pred             hhhhhhcccCCHHHHHHHhhhhHHHHHHH
Confidence            49999999999999999998887765544