Query 026765
Match_columns 233
No_of_seqs 183 out of 1338
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 21:37:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3frx_A Guanine nucleotide-bind 100.0 2E-38 6.9E-43 248.8 33.5 219 12-231 9-236 (319)
2 3ow8_A WD repeat-containing pr 100.0 2.5E-38 8.4E-43 248.5 31.5 217 13-232 25-247 (321)
3 1vyh_C Platelet-activating fac 100.0 2.9E-38 1E-42 255.9 32.5 215 13-232 101-337 (410)
4 2ynn_A Coatomer subunit beta'; 100.0 5E-38 1.7E-42 244.9 32.5 216 12-232 47-269 (304)
5 3ow8_A WD repeat-containing pr 100.0 3.2E-38 1.1E-42 247.9 31.4 214 14-232 74-289 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 4.9E-38 1.7E-42 245.0 32.2 216 12-232 5-227 (304)
7 4gqb_B Methylosome protein 50; 100.0 1.9E-38 6.3E-43 251.4 30.2 204 15-223 122-332 (344)
8 1vyh_C Platelet-activating fac 100.0 3.8E-38 1.3E-42 255.2 31.3 216 12-232 142-379 (410)
9 4gqb_B Methylosome protein 50; 100.0 7.7E-38 2.6E-42 247.9 31.4 208 18-227 80-294 (344)
10 2xzm_R RACK1; ribosome, transl 100.0 2.1E-37 7.2E-42 245.2 32.0 212 8-221 9-243 (343)
11 4ery_A WD repeat-containing pr 100.0 1.7E-36 5.9E-41 236.6 33.9 215 13-232 16-233 (312)
12 1got_B GT-beta; complex (GTP-b 100.0 1.3E-36 4.4E-41 240.5 33.1 213 12-230 47-265 (340)
13 2pm7_B Protein transport prote 100.0 5.1E-37 1.7E-41 238.5 29.6 208 14-223 3-239 (297)
14 2pbi_B Guanine nucleotide-bind 100.0 1E-36 3.5E-41 242.3 31.3 203 13-219 147-354 (354)
15 1nr0_A Actin interacting prote 100.0 1.4E-36 4.9E-41 257.5 33.3 218 12-229 51-362 (611)
16 3f3f_A Nucleoporin SEH1; struc 100.0 8.5E-37 2.9E-41 239.9 29.5 218 14-231 5-349 (351)
17 4g56_B MGC81050 protein; prote 100.0 4.7E-37 1.6E-41 244.6 28.2 206 15-225 134-346 (357)
18 2pbi_B Guanine nucleotide-bind 100.0 5.6E-36 1.9E-40 238.1 33.9 218 8-230 52-279 (354)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-36 5.9E-41 240.2 30.5 207 12-220 7-223 (345)
20 1got_B GT-beta; complex (GTP-b 100.0 5.4E-36 1.8E-40 236.9 33.2 218 13-232 90-311 (340)
21 1erj_A Transcriptional repress 100.0 5.1E-36 1.7E-40 241.5 32.2 207 21-232 124-351 (393)
22 4e54_B DNA damage-binding prot 100.0 3E-37 1E-41 251.7 24.3 216 14-231 113-336 (435)
23 3iz6_a 40S ribosomal protein R 100.0 3.1E-36 1.1E-40 241.7 28.4 222 9-230 55-337 (380)
24 2hes_X YDR267CP; beta-propelle 100.0 1.4E-35 4.6E-40 233.7 30.7 207 12-223 6-231 (330)
25 4g56_B MGC81050 protein; prote 100.0 5.1E-36 1.7E-40 238.6 28.1 213 15-229 89-308 (357)
26 4aow_A Guanine nucleotide-bind 100.0 8.4E-35 2.9E-39 228.8 34.2 218 13-231 31-255 (340)
27 3zwl_B Eukaryotic translation 100.0 6.9E-35 2.3E-39 231.3 32.0 215 11-230 23-257 (369)
28 3bg1_A Protein SEC13 homolog; 100.0 2E-36 6.9E-41 237.1 22.3 207 14-222 7-247 (316)
29 4ery_A WD repeat-containing pr 100.0 7.8E-35 2.7E-39 227.2 30.6 216 12-232 57-278 (312)
30 3dm0_A Maltose-binding peripla 100.0 6.3E-35 2.2E-39 250.6 32.7 216 14-230 376-600 (694)
31 3frx_A Guanine nucleotide-bind 100.0 2.2E-34 7.4E-39 225.8 32.8 210 13-230 58-275 (319)
32 3iz6_a 40S ribosomal protein R 100.0 7.9E-36 2.7E-40 239.3 25.1 207 13-223 150-376 (380)
33 2pm7_B Protein transport prote 100.0 7.4E-35 2.5E-39 226.3 29.5 217 12-230 45-296 (297)
34 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-35 1E-39 233.1 27.7 217 13-231 98-344 (345)
35 3ei3_B DNA damage-binding prot 100.0 6.6E-35 2.2E-39 233.7 29.1 215 13-231 66-291 (383)
36 2hes_X YDR267CP; beta-propelle 100.0 8.1E-35 2.8E-39 229.3 28.6 209 12-222 99-328 (330)
37 1erj_A Transcriptional repress 100.0 2.4E-34 8.2E-39 231.7 30.7 200 18-223 62-288 (393)
38 3mmy_A MRNA export factor; mRN 100.0 6.1E-34 2.1E-38 225.7 29.8 217 13-232 32-314 (368)
39 3bg1_A Protein SEC13 homolog; 100.0 1.3E-34 4.4E-39 226.8 24.7 217 13-231 50-305 (316)
40 3gre_A Serine/threonine-protei 100.0 7.7E-35 2.6E-39 237.1 24.3 220 11-232 53-302 (437)
41 2xzm_R RACK1; ribosome, transl 100.0 1.2E-33 4.1E-38 223.6 30.5 207 13-226 69-289 (343)
42 1nr0_A Actin interacting prote 100.0 1.5E-33 5.1E-38 239.0 31.6 209 13-227 183-528 (611)
43 2ymu_A WD-40 repeat protein; u 100.0 1.4E-33 4.6E-38 237.0 30.8 198 13-219 378-577 (577)
44 3jrp_A Fusion protein of prote 100.0 1.1E-33 3.8E-38 225.2 28.7 210 12-223 3-241 (379)
45 3dwl_C Actin-related protein 2 100.0 1.1E-35 3.7E-40 237.5 16.7 214 15-232 6-250 (377)
46 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-33 3.9E-38 224.9 28.2 215 15-232 3-243 (372)
47 2pm9_A Protein WEB1, protein t 100.0 4.1E-34 1.4E-38 230.8 25.6 215 18-232 65-304 (416)
48 2ymu_A WD-40 repeat protein; u 100.0 5.1E-33 1.7E-37 233.5 32.9 212 12-232 336-548 (577)
49 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 5E-38 227.5 28.4 212 13-224 74-301 (402)
50 2j04_B YDR362CP, TAU91; beta p 100.0 3E-34 1E-38 238.3 23.5 206 15-222 202-428 (524)
51 4gga_A P55CDC, cell division c 100.0 3.9E-33 1.3E-37 226.4 29.6 214 15-229 142-402 (420)
52 1sq9_A Antiviral protein SKI8; 100.0 2.9E-33 9.9E-38 224.7 28.2 217 12-230 54-330 (397)
53 1gxr_A ESG1, transducin-like e 100.0 4.7E-32 1.6E-36 212.6 34.4 208 18-229 95-303 (337)
54 4aow_A Guanine nucleotide-bind 100.0 1.6E-32 5.5E-37 215.8 31.1 212 12-224 78-339 (340)
55 4ggc_A P55CDC, cell division c 100.0 1E-32 3.5E-37 215.0 29.2 209 15-224 62-317 (318)
56 4a11_B DNA excision repair pro 100.0 1.4E-32 4.7E-37 221.0 30.4 216 13-228 36-282 (408)
57 1gxr_A ESG1, transducin-like e 100.0 4.7E-32 1.6E-36 212.6 32.0 203 13-221 134-336 (337)
58 4h5i_A Guanine nucleotide-exch 100.0 7.6E-33 2.6E-37 220.9 27.7 199 18-223 131-344 (365)
59 3dw8_B Serine/threonine-protei 100.0 3.3E-33 1.1E-37 227.7 25.8 213 18-232 26-326 (447)
60 2pm9_A Protein WEB1, protein t 100.0 8E-34 2.7E-38 229.1 21.8 215 12-226 105-341 (416)
61 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-33 1.4E-37 245.1 27.7 206 15-228 12-248 (902)
62 1yfq_A Cell cycle arrest prote 100.0 4.7E-33 1.6E-37 219.1 24.4 211 13-232 49-292 (342)
63 1sq9_A Antiviral protein SKI8; 100.0 2.7E-32 9.4E-37 219.0 28.6 210 13-224 109-397 (397)
64 3dm0_A Maltose-binding peripla 100.0 1.1E-32 3.6E-37 236.8 27.3 207 12-222 464-693 (694)
65 3zwl_B Eukaryotic translation 100.0 9.3E-32 3.2E-36 213.2 29.5 216 12-228 66-352 (369)
66 3jrp_A Fusion protein of prote 100.0 6E-32 2.1E-36 215.2 28.5 209 13-223 48-288 (379)
67 3vl1_A 26S proteasome regulato 100.0 9.3E-33 3.2E-37 223.4 24.0 204 13-222 132-365 (420)
68 3v7d_B Cell division control p 100.0 7.9E-32 2.7E-36 220.9 29.4 212 13-232 114-351 (464)
69 4aez_A CDC20, WD repeat-contai 100.0 1.1E-31 3.7E-36 216.6 29.4 213 12-230 168-388 (401)
70 3k26_A Polycomb protein EED; W 100.0 3.8E-33 1.3E-37 221.1 20.6 201 19-225 68-321 (366)
71 3dwl_C Actin-related protein 2 100.0 4E-33 1.4E-37 222.7 20.5 207 12-221 47-280 (377)
72 3i2n_A WD repeat-containing pr 100.0 4.6E-32 1.6E-36 214.4 26.4 211 12-226 103-357 (357)
73 3vl1_A 26S proteasome regulato 100.0 2.4E-32 8.3E-37 221.0 25.2 210 16-231 94-332 (420)
74 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-31 4.1E-36 233.3 30.3 216 12-232 5-227 (814)
75 3jro_A Fusion protein of prote 100.0 4.4E-32 1.5E-36 234.9 27.0 209 13-223 2-239 (753)
76 3i2n_A WD repeat-containing pr 100.0 1.3E-31 4.3E-36 211.8 27.4 203 17-223 62-292 (357)
77 2xyi_A Probable histone-bindin 100.0 1.2E-31 4E-36 218.4 27.5 213 11-223 172-411 (430)
78 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-32 5.7E-37 227.9 22.8 204 14-221 260-516 (524)
79 3ei3_B DNA damage-binding prot 100.0 1.4E-31 4.9E-36 214.3 26.1 206 17-231 115-348 (383)
80 3mkq_A Coatomer beta'-subunit; 100.0 3.2E-31 1.1E-35 230.7 30.2 215 12-231 47-268 (814)
81 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-31 7.1E-36 211.9 26.6 207 12-222 44-274 (372)
82 1r5m_A SIR4-interacting protei 100.0 5.4E-31 1.8E-35 212.6 29.3 199 19-224 107-363 (425)
83 3vu4_A KMHSV2; beta-propeller 100.0 2E-31 7E-36 211.9 25.9 204 13-223 12-272 (355)
84 3v7d_B Cell division control p 100.0 7.2E-31 2.5E-35 215.2 29.9 211 12-229 154-388 (464)
85 3odt_A Protein DOA1; ubiquitin 100.0 7.2E-31 2.4E-35 204.0 28.1 212 13-232 52-265 (313)
86 4h5i_A Guanine nucleotide-exch 100.0 9.2E-31 3.2E-35 208.9 29.1 162 67-229 134-307 (365)
87 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-30 4.8E-35 235.9 33.9 218 10-232 605-881 (1249)
88 3k26_A Polycomb protein EED; W 100.0 3.2E-31 1.1E-35 210.0 25.9 208 15-224 13-262 (366)
89 3dw8_B Serine/threonine-protei 100.0 2.1E-31 7.1E-36 217.0 25.5 212 13-227 74-378 (447)
90 2xyi_A Probable histone-bindin 100.0 3.9E-31 1.3E-35 215.3 26.8 210 13-222 121-353 (430)
91 1yfq_A Cell cycle arrest prote 100.0 1.5E-31 5.1E-36 210.5 23.6 211 16-231 7-240 (342)
92 3gre_A Serine/threonine-protei 100.0 8.8E-32 3E-36 219.0 22.6 212 18-231 109-368 (437)
93 2w18_A PALB2, fancn, partner a 100.0 9.8E-32 3.3E-36 208.6 21.6 200 19-221 110-356 (356)
94 1r5m_A SIR4-interacting protei 100.0 2.4E-30 8.2E-35 208.7 30.2 213 17-232 42-329 (425)
95 4gq1_A NUP37; propeller, trans 100.0 5.7E-32 2E-36 217.9 20.2 201 15-220 131-387 (393)
96 3odt_A Protein DOA1; ubiquitin 100.0 2E-30 6.9E-35 201.4 27.2 203 13-228 97-302 (313)
97 4a11_B DNA excision repair pro 100.0 4.5E-30 1.5E-34 206.3 29.1 208 18-230 97-373 (408)
98 4aez_A CDC20, WD repeat-contai 100.0 9.4E-30 3.2E-34 205.2 30.7 203 18-228 132-342 (401)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1E-29 3.5E-34 207.9 30.3 213 16-230 98-352 (450)
100 3jro_A Fusion protein of prote 100.0 2.2E-30 7.6E-35 224.3 25.2 209 13-223 46-286 (753)
101 3mmy_A MRNA export factor; mRN 100.0 4.1E-30 1.4E-34 203.7 24.8 201 14-220 80-344 (368)
102 1pgu_A Actin interacting prote 100.0 2.6E-29 8.9E-34 212.0 30.9 217 11-231 54-292 (615)
103 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-29 5E-34 229.2 31.1 207 12-222 649-913 (1249)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.9E-30 2.4E-34 209.0 25.9 209 20-230 4-279 (450)
105 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-29 1.1E-33 204.1 28.1 205 13-232 166-384 (435)
106 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-28 3.7E-33 201.0 30.8 202 16-232 129-335 (435)
107 4e54_B DNA damage-binding prot 100.0 3.1E-30 1.1E-34 210.2 21.5 211 14-230 158-395 (435)
108 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-28 3.9E-33 201.4 30.3 205 13-232 111-318 (445)
109 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-30 4E-35 206.4 16.5 193 27-230 43-252 (343)
110 1pgu_A Actin interacting prote 100.0 8.6E-29 2.9E-33 208.8 28.9 213 12-232 108-338 (615)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-29 5.4E-34 203.9 23.2 204 22-225 36-257 (402)
112 3lrv_A PRE-mRNA-splicing facto 100.0 2.7E-29 9.1E-34 198.6 22.3 199 20-223 76-293 (343)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.4E-28 2.9E-32 196.2 30.9 205 12-231 151-357 (445)
114 2j04_A TAU60, YPL007P, hypothe 100.0 9.2E-29 3.1E-33 203.2 24.7 191 18-222 83-297 (588)
115 1l0q_A Surface layer protein; 100.0 2.8E-27 9.6E-32 189.6 32.6 212 13-231 25-242 (391)
116 4gq1_A NUP37; propeller, trans 100.0 4.4E-30 1.5E-34 206.9 16.1 214 19-232 88-358 (393)
117 1l0q_A Surface layer protein; 100.0 4.8E-27 1.7E-31 188.3 33.5 211 14-231 68-284 (391)
118 3bws_A Protein LP49; two-domai 100.0 9.4E-28 3.2E-32 194.9 29.2 212 15-231 164-399 (433)
119 2oaj_A Protein SNI1; WD40 repe 100.0 8.9E-29 3E-33 217.6 22.5 211 15-229 430-739 (902)
120 4ggc_A P55CDC, cell division c 100.0 4.1E-27 1.4E-31 183.2 28.1 204 23-232 28-283 (318)
121 4gga_A P55CDC, cell division c 100.0 8.7E-27 3E-31 189.0 27.2 202 23-231 108-319 (420)
122 2j04_A TAU60, YPL007P, hypothe 100.0 9.3E-29 3.2E-33 203.2 14.2 184 19-224 14-213 (588)
123 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-25 5.8E-30 181.3 27.8 212 12-231 170-395 (415)
124 3bws_A Protein LP49; two-domai 99.9 2.2E-24 7.7E-29 175.0 31.3 203 13-222 204-432 (433)
125 3vu4_A KMHSV2; beta-propeller 99.9 3.6E-25 1.2E-29 175.9 22.7 198 21-223 59-337 (355)
126 3f3f_A Nucleoporin SEH1; struc 99.9 1.5E-24 5.1E-29 170.0 23.9 162 61-223 6-250 (351)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.7E-23 9.3E-28 168.4 21.5 207 13-226 110-348 (415)
128 2w18_A PALB2, fancn, partner a 99.9 3.5E-22 1.2E-26 155.2 25.3 205 23-232 42-324 (356)
129 1ri6_A Putative isomerase YBHE 99.9 4.1E-22 1.4E-26 156.4 24.9 212 18-230 35-274 (343)
130 2ojh_A Uncharacterized protein 99.9 2.4E-22 8.3E-27 154.1 22.0 205 14-225 35-261 (297)
131 2oit_A Nucleoporin 214KDA; NH2 99.9 8.2E-23 2.8E-27 166.4 20.2 201 19-223 35-279 (434)
132 3hfq_A Uncharacterized protein 99.9 3.4E-20 1.2E-24 146.3 28.7 208 16-226 81-323 (347)
133 3u4y_A Uncharacterized protein 99.9 2.1E-20 7.2E-25 146.4 27.1 210 14-229 34-261 (331)
134 1nir_A Nitrite reductase; hemo 99.9 2.2E-20 7.4E-25 156.1 28.4 212 14-232 173-419 (543)
135 1nir_A Nitrite reductase; hemo 99.9 1.5E-20 5.1E-25 157.1 27.1 197 27-230 144-363 (543)
136 3vgz_A Uncharacterized protein 99.9 1.4E-20 4.8E-25 148.4 25.6 207 19-230 39-270 (353)
137 1pby_B Quinohemoprotein amine 99.9 1.7E-20 5.8E-25 146.8 25.6 202 22-231 35-319 (337)
138 2oit_A Nucleoporin 214KDA; NH2 99.9 2.1E-21 7.2E-26 158.1 21.0 163 18-181 90-279 (434)
139 1ri6_A Putative isomerase YBHE 99.9 3E-20 1E-24 145.7 26.5 197 22-221 85-307 (343)
140 3vgz_A Uncharacterized protein 99.9 6.9E-20 2.3E-24 144.4 26.7 205 20-230 88-311 (353)
141 3u4y_A Uncharacterized protein 99.9 5.7E-20 1.9E-24 143.9 25.7 200 26-230 3-218 (331)
142 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-21 1.6E-25 165.5 21.0 203 20-230 36-329 (741)
143 3o4h_A Acylamino-acid-releasin 99.9 2.1E-20 7.1E-25 157.5 20.9 202 19-231 20-235 (582)
144 1pby_B Quinohemoprotein amine 99.9 1.8E-19 6E-24 141.0 24.8 190 33-230 2-277 (337)
145 1xfd_A DIP, dipeptidyl aminope 99.9 6.7E-21 2.3E-25 164.0 17.0 203 21-230 17-297 (723)
146 1jmx_B Amine dehydrogenase; ox 99.9 1.9E-19 6.5E-24 141.6 23.3 199 22-230 44-333 (349)
147 1jmx_B Amine dehydrogenase; ox 99.9 2E-19 6.8E-24 141.4 22.6 197 25-230 4-292 (349)
148 3scy_A Hypothetical bacterial 99.9 1.4E-18 5E-23 137.8 26.8 200 19-221 48-290 (361)
149 3hfq_A Uncharacterized protein 99.9 6.6E-19 2.3E-23 138.9 24.7 209 18-230 37-282 (347)
150 2ojh_A Uncharacterized protein 99.8 1.9E-19 6.5E-24 137.9 20.1 194 16-213 79-293 (297)
151 2ecf_A Dipeptidyl peptidase IV 99.8 1.3E-19 4.4E-24 156.5 21.3 201 22-229 110-374 (741)
152 2z3z_A Dipeptidyl aminopeptida 99.8 1.4E-19 4.9E-24 155.5 21.0 201 21-230 82-351 (706)
153 3o4h_A Acylamino-acid-releasin 99.8 1.5E-19 5E-24 152.3 20.0 203 14-227 57-279 (582)
154 3scy_A Hypothetical bacterial 99.8 1.5E-17 5.3E-22 131.8 28.6 207 18-227 97-344 (361)
155 1k32_A Tricorn protease; prote 99.8 6.1E-19 2.1E-23 157.7 20.4 204 15-229 240-467 (1045)
156 1k32_A Tricorn protease; prote 99.8 1.2E-18 4E-23 155.9 21.2 196 19-223 294-503 (1045)
157 1z68_A Fibroblast activation p 99.8 1.9E-19 6.7E-24 155.0 14.2 198 25-229 20-298 (719)
158 1xfd_A DIP, dipeptidyl aminope 99.8 2E-18 7E-23 148.5 20.2 202 14-219 51-341 (723)
159 2z3z_A Dipeptidyl aminopeptida 99.8 2.1E-18 7.1E-23 148.2 19.8 192 23-225 28-296 (706)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.3E-17 1.1E-21 130.4 23.7 204 19-226 38-296 (365)
161 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.3E-17 1.5E-21 129.7 21.9 200 23-223 85-342 (365)
162 1z68_A Fibroblast activation p 99.8 1.4E-17 4.8E-22 143.4 14.4 195 23-224 62-348 (719)
163 3azo_A Aminopeptidase; POP fam 99.7 1.2E-16 4.2E-21 136.3 19.5 210 13-227 16-279 (662)
164 1q7f_A NHL, brain tumor CG1071 99.7 6.3E-15 2.2E-19 113.0 27.1 204 18-230 27-245 (286)
165 4a5s_A Dipeptidyl peptidase 4 99.7 3.2E-17 1.1E-21 141.8 15.7 197 20-224 16-296 (740)
166 2oiz_A Aromatic amine dehydrog 99.7 2.7E-15 9.2E-20 119.3 24.8 208 14-230 45-344 (361)
167 3fvz_A Peptidyl-glycine alpha- 99.7 1.7E-15 5.7E-20 118.9 22.8 201 18-222 88-322 (329)
168 1q7f_A NHL, brain tumor CG1071 99.7 7.5E-15 2.6E-19 112.6 25.7 198 18-225 74-283 (286)
169 3pe7_A Oligogalacturonate lyas 99.7 1.5E-15 5.1E-20 121.3 22.3 208 12-225 22-276 (388)
170 3fvz_A Peptidyl-glycine alpha- 99.7 4.6E-15 1.6E-19 116.4 24.2 206 20-230 23-285 (329)
171 3e5z_A Putative gluconolactona 99.7 3.4E-14 1.2E-18 109.6 27.2 207 13-230 20-253 (296)
172 3azo_A Aminopeptidase; POP fam 99.7 1.3E-15 4.4E-20 130.0 20.4 210 14-229 61-331 (662)
173 2dg1_A DRP35, lactonase; beta 99.7 9.3E-14 3.2E-18 108.7 29.3 210 15-230 39-270 (333)
174 4a5s_A Dipeptidyl peptidase 4 99.7 1.2E-15 4.1E-20 132.0 18.3 195 24-225 65-356 (740)
175 3dsm_A Uncharacterized protein 99.7 4E-14 1.4E-18 111.1 23.2 204 20-230 83-309 (328)
176 3pe7_A Oligogalacturonate lyas 99.7 1.4E-14 4.9E-19 115.5 19.2 204 17-225 77-332 (388)
177 2xdw_A Prolyl endopeptidase; a 99.7 5.9E-14 2E-18 120.9 23.9 207 18-230 122-376 (710)
178 3no2_A Uncharacterized protein 99.6 2.1E-13 7.2E-18 104.4 23.1 190 30-230 3-203 (276)
179 2gop_A Trilobed protease; beta 99.6 9E-14 3.1E-18 109.3 21.5 190 21-226 59-295 (347)
180 3c5m_A Oligogalacturonate lyas 99.6 5.5E-15 1.9E-19 118.0 14.6 197 23-226 38-277 (396)
181 3e5z_A Putative gluconolactona 99.6 1.6E-13 5.3E-18 105.9 22.3 201 13-223 61-287 (296)
182 2bkl_A Prolyl endopeptidase; m 99.6 5.6E-14 1.9E-18 120.8 20.4 203 18-229 118-357 (695)
183 1rwi_B Serine/threonine-protei 99.6 3.4E-13 1.2E-17 102.3 21.3 199 19-224 65-266 (270)
184 2dg1_A DRP35, lactonase; beta 99.6 1.4E-13 4.8E-18 107.7 19.6 192 21-221 6-212 (333)
185 3c5m_A Oligogalacturonate lyas 99.6 2.7E-14 9.2E-19 114.0 15.5 194 25-225 85-332 (396)
186 3dsm_A Uncharacterized protein 99.6 1.5E-12 5.2E-17 102.0 24.7 194 21-225 44-256 (328)
187 1rwi_B Serine/threonine-protei 99.6 1.3E-12 4.6E-17 99.0 21.6 197 22-224 25-224 (270)
188 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.3E-12 7.7E-17 99.8 23.0 209 15-229 12-263 (314)
189 2xdw_A Prolyl endopeptidase; a 99.6 9.3E-13 3.2E-17 113.4 22.7 202 23-224 173-416 (710)
190 1qks_A Cytochrome CD1 nitrite 99.6 1.5E-11 5.1E-16 103.0 28.6 195 30-230 165-381 (567)
191 2gop_A Trilobed protease; beta 99.5 3.2E-12 1.1E-16 100.4 22.1 185 19-224 103-332 (347)
192 1xip_A Nucleoporin NUP159; bet 99.5 6.2E-13 2.1E-17 105.9 17.8 175 22-210 39-232 (388)
193 3no2_A Uncharacterized protein 99.5 2.9E-11 1E-15 92.4 26.4 207 15-231 30-261 (276)
194 2z2n_A Virginiamycin B lyase; 99.5 6.4E-11 2.2E-15 90.7 27.5 199 16-224 10-214 (299)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.6E-11 5.6E-16 94.9 23.4 195 19-222 69-299 (314)
196 2bkl_A Prolyl endopeptidase; m 99.5 2.8E-12 9.7E-17 110.2 19.9 200 24-225 171-400 (695)
197 2oiz_A Aromatic amine dehydrog 99.5 1.8E-11 6.1E-16 97.2 22.9 89 114-204 259-360 (361)
198 1yr2_A Prolyl oligopeptidase; 99.5 5.8E-12 2E-16 109.0 21.5 203 18-229 160-401 (741)
199 2z2n_A Virginiamycin B lyase; 99.5 2.4E-10 8.3E-15 87.5 28.4 195 19-221 55-254 (299)
200 1qks_A Cytochrome CD1 nitrite 99.5 2.6E-10 8.9E-15 95.5 29.8 205 22-230 198-436 (567)
201 3g4e_A Regucalcin; six bladed 99.5 2.5E-10 8.4E-15 88.1 26.0 204 18-230 10-237 (297)
202 2mad_H Methylamine dehydrogena 99.4 4.4E-10 1.5E-14 89.6 27.7 201 25-229 70-357 (373)
203 3hrp_A Uncharacterized protein 99.4 1.4E-10 4.7E-15 93.6 24.7 197 20-225 130-357 (409)
204 2qc5_A Streptogramin B lactona 99.4 1.1E-09 3.7E-14 83.8 27.5 195 18-221 17-217 (300)
205 1xip_A Nucleoporin NUP159; bet 99.4 1.2E-11 4E-16 98.5 16.6 148 68-229 39-200 (388)
206 3dr2_A Exported gluconolactona 99.4 1.7E-09 5.9E-14 83.6 26.3 207 12-230 36-274 (305)
207 2qc5_A Streptogramin B lactona 99.4 3.6E-09 1.2E-13 80.9 27.9 195 19-221 60-259 (300)
208 3hrp_A Uncharacterized protein 99.4 7.9E-10 2.7E-14 89.2 23.6 192 26-221 176-409 (409)
209 3c75_H MADH, methylamine dehyd 99.3 4.7E-10 1.6E-14 90.5 22.1 194 30-230 82-410 (426)
210 2ghs_A AGR_C_1268P; regucalcin 99.3 2E-09 6.7E-14 84.2 24.9 197 22-230 50-267 (326)
211 3g4e_A Regucalcin; six bladed 99.3 1.5E-09 5.1E-14 83.7 23.9 186 19-210 52-260 (297)
212 1yr2_A Prolyl oligopeptidase; 99.3 3.7E-10 1.3E-14 97.7 21.5 198 24-224 212-443 (741)
213 3iuj_A Prolyl endopeptidase; h 99.3 1.7E-10 5.6E-15 99.2 19.1 198 18-224 126-361 (693)
214 3dr2_A Exported gluconolactona 99.3 1.1E-09 3.6E-14 84.8 21.5 194 14-217 79-302 (305)
215 2iwa_A Glutamine cyclotransfer 99.3 4.1E-09 1.4E-13 79.5 23.8 201 14-223 13-238 (266)
216 2qe8_A Uncharacterized protein 99.3 1.6E-09 5.6E-14 85.2 22.7 198 21-224 17-280 (343)
217 2ghs_A AGR_C_1268P; regucalcin 99.3 6.1E-09 2.1E-13 81.4 24.0 183 20-211 89-291 (326)
218 2hz6_A Endoplasmic reticulum t 99.2 5E-12 1.7E-16 100.7 4.8 187 31-230 8-200 (369)
219 3sjl_D Methylamine dehydrogena 99.2 6.5E-09 2.2E-13 82.6 22.0 197 25-231 141-372 (386)
220 1mda_H Methylamine dehydrogena 99.2 2.8E-09 9.6E-14 84.5 19.5 200 25-231 69-355 (368)
221 2qe8_A Uncharacterized protein 99.2 3.7E-09 1.3E-13 83.2 19.7 200 17-219 63-318 (343)
222 2ece_A 462AA long hypothetical 99.2 8.9E-08 3E-12 77.0 25.2 189 30-221 93-351 (462)
223 3nol_A Glutamine cyclotransfer 99.1 3.2E-08 1.1E-12 74.0 21.3 187 14-210 35-243 (262)
224 3nok_A Glutaminyl cyclase; bet 99.1 2.8E-08 9.6E-13 74.4 20.8 179 21-209 55-253 (268)
225 3iuj_A Prolyl endopeptidase; h 99.1 6.2E-09 2.1E-13 89.5 19.5 196 24-224 178-407 (693)
226 2iwa_A Glutamine cyclotransfer 99.1 1.6E-08 5.6E-13 76.2 19.2 160 68-230 22-189 (266)
227 2mad_H Methylamine dehydrogena 99.1 3.1E-07 1.1E-11 73.1 26.6 115 27-148 27-166 (373)
228 1fwx_A Nitrous oxide reductase 99.1 2.7E-08 9.3E-13 82.5 19.8 189 30-222 99-361 (595)
229 3mbr_X Glutamine cyclotransfer 99.1 3E-07 1E-11 68.1 22.7 187 14-210 13-222 (243)
230 1npe_A Nidogen, entactin; glyc 99.0 1.1E-06 3.9E-11 66.3 26.6 204 21-230 36-246 (267)
231 3nol_A Glutamine cyclotransfer 99.0 5.2E-08 1.8E-12 72.9 18.4 158 68-230 44-209 (262)
232 3sjl_D Methylamine dehydrogena 99.0 2.6E-08 8.9E-13 79.1 17.4 146 73-222 39-208 (386)
233 3nok_A Glutaminyl cyclase; bet 99.0 6.2E-08 2.1E-12 72.5 18.1 157 68-230 56-218 (268)
234 2hz6_A Endoplasmic reticulum t 99.0 2.1E-10 7.3E-15 91.3 3.0 145 79-229 9-156 (369)
235 3mbr_X Glutamine cyclotransfer 98.9 5E-07 1.7E-11 67.0 20.4 159 67-230 21-187 (243)
236 2ece_A 462AA long hypothetical 98.9 4.9E-07 1.7E-11 72.8 21.7 183 24-210 141-399 (462)
237 2fp8_A Strictosidine synthase; 98.9 3.8E-06 1.3E-10 65.2 24.8 209 16-230 14-276 (322)
238 1kb0_A Quinohemoprotein alcoho 98.9 4E-07 1.4E-11 78.0 20.3 158 71-230 247-515 (677)
239 3c75_H MADH, methylamine dehyd 98.9 1.3E-07 4.3E-12 76.3 16.1 100 89-189 99-218 (426)
240 1npe_A Nidogen, entactin; glyc 98.8 6.4E-06 2.2E-10 62.1 23.5 158 67-225 36-201 (267)
241 1kb0_A Quinohemoprotein alcoho 98.8 4.8E-07 1.6E-11 77.6 17.7 183 24-208 246-537 (677)
242 1fwx_A Nitrous oxide reductase 98.8 4.1E-07 1.4E-11 75.6 16.4 196 21-222 134-431 (595)
243 2fp8_A Strictosidine synthase; 98.8 1.2E-05 4.1E-10 62.4 23.8 194 22-222 81-313 (322)
244 1yiq_A Quinohemoprotein alcoho 98.7 2.7E-06 9.1E-11 73.1 20.7 158 71-230 239-513 (689)
245 1mda_H Methylamine dehydrogena 98.7 3.8E-07 1.3E-11 72.3 12.9 87 114-201 269-366 (368)
246 1yiq_A Quinohemoprotein alcoho 98.6 3.5E-06 1.2E-10 72.4 18.8 184 25-210 239-537 (689)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2.7E-05 9.1E-10 61.6 21.8 145 81-230 190-345 (376)
248 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2.4E-05 8.3E-10 61.9 21.2 190 31-229 52-265 (376)
249 3v65_B Low-density lipoprotein 98.5 0.00013 4.4E-09 58.2 23.7 204 21-229 116-325 (386)
250 3v64_C Agrin; beta propeller, 98.5 0.0002 6.8E-09 56.3 24.6 203 22-229 74-282 (349)
251 2p4o_A Hypothetical protein; p 98.5 0.00018 6E-09 55.4 23.3 194 21-225 32-244 (306)
252 3p5b_L Low density lipoprotein 98.5 0.0003 1E-08 56.4 27.6 209 19-229 110-327 (400)
253 1ijq_A LDL receptor, low-densi 98.4 0.00027 9.2E-09 54.7 26.4 208 20-229 29-245 (316)
254 3hxj_A Pyrrolo-quinoline quino 98.4 6.7E-05 2.3E-09 57.9 19.7 183 32-230 107-291 (330)
255 3hxj_A Pyrrolo-quinoline quino 98.4 4.1E-05 1.4E-09 59.1 18.1 188 20-223 136-325 (330)
256 3sov_A LRP-6, low-density lipo 98.4 0.00031 1.1E-08 54.5 22.8 204 21-229 35-245 (318)
257 3qqz_A Putative uncharacterize 98.4 0.00012 4.1E-09 54.8 19.5 167 61-229 21-210 (255)
258 2xe4_A Oligopeptidase B; hydro 98.4 8E-05 2.7E-09 64.6 20.9 191 22-220 175-398 (751)
259 3v64_C Agrin; beta propeller, 98.4 0.00037 1.3E-08 54.7 22.7 207 8-222 21-234 (349)
260 3tc9_A Hypothetical hydrolase; 98.3 6.2E-05 2.1E-09 61.0 17.8 152 69-221 139-300 (430)
261 1k3i_A Galactose oxidase precu 98.3 3E-05 1E-09 66.2 16.7 198 25-225 190-444 (656)
262 2p9w_A MAL S 1 allergenic prot 98.3 0.00026 8.9E-09 54.8 19.7 159 62-222 8-215 (334)
263 3m0c_C LDL receptor, low-densi 98.3 0.0015 5.2E-08 56.8 26.8 209 19-229 422-639 (791)
264 2ad6_A Methanol dehydrogenase 98.3 0.00021 7.3E-09 60.0 20.2 140 90-230 273-502 (571)
265 3amr_A 3-phytase; beta-propell 98.2 0.00098 3.3E-08 52.0 23.6 193 31-230 39-272 (355)
266 1kv9_A Type II quinohemoprotei 98.2 0.00032 1.1E-08 60.0 20.5 158 71-230 234-496 (668)
267 3v65_B Low-density lipoprotein 98.2 0.0011 3.9E-08 52.7 22.1 193 22-222 78-277 (386)
268 2xe4_A Oligopeptidase B; hydro 98.2 8.2E-05 2.8E-09 64.6 15.8 154 68-222 175-354 (751)
269 4hw6_A Hypothetical protein, I 98.2 0.0018 6E-08 52.5 24.1 197 19-221 180-432 (433)
270 1n7d_A LDL receptor, low-densi 98.2 3.5E-05 1.2E-09 66.3 13.2 207 22-230 407-622 (699)
271 1kv9_A Type II quinohemoprotei 98.1 0.00019 6.5E-09 61.4 17.4 185 24-210 233-520 (668)
272 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0033 1.1E-07 53.4 25.0 201 21-227 37-242 (628)
273 3tc9_A Hypothetical hydrolase; 98.1 0.0024 8.1E-08 51.7 27.8 198 19-221 177-429 (430)
274 3kya_A Putative phosphatase; s 98.1 0.0027 9.3E-08 52.1 24.0 206 21-229 186-482 (496)
275 4hw6_A Hypothetical protein, I 98.1 0.0028 9.4E-08 51.4 24.4 200 22-229 140-379 (433)
276 2ad6_A Methanol dehydrogenase 98.1 0.00093 3.2E-08 56.1 19.6 151 32-187 115-342 (571)
277 1flg_A Protein (quinoprotein e 98.0 0.0017 5.7E-08 54.7 21.0 141 89-230 291-524 (582)
278 2p9w_A MAL S 1 allergenic prot 98.0 0.0023 8E-08 49.5 20.1 192 24-220 16-263 (334)
279 2p4o_A Hypothetical protein; p 98.0 0.0024 8.2E-08 49.0 22.8 186 21-212 72-278 (306)
280 1k3i_A Galactose oxidase precu 98.0 0.00019 6.6E-09 61.2 15.2 199 22-224 244-499 (656)
281 1flg_A Protein (quinoprotein e 98.0 0.00063 2.1E-08 57.3 17.7 82 129-210 465-548 (582)
282 1w6s_A Methanol dehydrogenase 98.0 0.0028 9.4E-08 53.5 20.8 141 89-230 278-511 (599)
283 3s94_A LRP-6, low-density lipo 97.9 0.0065 2.2E-07 51.5 22.9 205 20-228 39-249 (619)
284 1w6s_A Methanol dehydrogenase 97.9 0.0031 1E-07 53.3 20.8 195 32-230 62-350 (599)
285 3amr_A 3-phytase; beta-propell 97.9 0.0028 9.6E-08 49.5 18.9 147 41-188 98-272 (355)
286 3p5b_L Low density lipoprotein 97.9 0.0048 1.6E-07 49.4 22.4 177 41-222 91-277 (400)
287 3sov_A LRP-6, low-density lipo 97.9 0.0039 1.3E-07 48.3 20.2 177 41-221 12-196 (318)
288 4a2l_A BT_4663, two-component 97.9 0.0089 3E-07 52.1 27.5 196 20-225 309-529 (795)
289 4a2l_A BT_4663, two-component 97.9 0.0091 3.1E-07 52.1 27.2 193 20-225 356-574 (795)
290 3kya_A Putative phosphatase; s 97.9 0.0011 3.7E-08 54.4 17.0 153 69-221 141-340 (496)
291 1ijq_A LDL receptor, low-densi 97.8 0.0055 1.9E-07 47.3 24.2 174 42-221 10-194 (316)
292 3v9f_A Two-component system se 97.8 0.014 4.8E-07 50.8 23.5 196 20-224 362-570 (781)
293 3qqz_A Putative uncharacterize 97.7 0.0082 2.8E-07 44.8 26.7 201 14-221 20-252 (255)
294 3v9f_A Two-component system se 97.6 0.03 1E-06 48.7 24.6 196 19-224 311-526 (781)
295 3m0c_C LDL receptor, low-densi 97.5 0.037 1.3E-06 48.3 24.5 177 41-222 403-589 (791)
296 2xbg_A YCF48-like protein; pho 97.5 0.022 7.5E-07 44.1 21.1 190 20-220 121-320 (327)
297 1n7d_A LDL receptor, low-densi 97.2 0.001 3.5E-08 57.2 7.9 155 67-222 406-571 (699)
298 2vpj_A Kelch-like protein 12; 97.1 0.047 1.6E-06 41.4 15.9 188 31-224 62-280 (301)
299 2ism_A Putative oxidoreductase 97.1 0.071 2.4E-06 41.7 21.0 201 15-222 25-297 (352)
300 2xbg_A YCF48-like protein; pho 97.0 0.071 2.4E-06 41.2 23.0 185 20-215 79-272 (327)
301 4a0p_A LRP6, LRP-6, low-densit 96.9 0.17 5.8E-06 43.0 26.6 198 21-225 340-552 (628)
302 3sre_A PON1, serum paraoxonase 96.8 0.12 4.2E-06 40.5 23.6 194 24-221 53-297 (355)
303 2xn4_A Kelch-like protein 2; s 96.8 0.078 2.7E-06 40.2 14.7 142 79-224 109-278 (302)
304 3sre_A PON1, serum paraoxonase 96.7 0.14 4.9E-06 40.1 19.2 132 87-221 81-251 (355)
305 3ii7_A Kelch-like protein 7; p 96.7 0.089 3E-06 40.0 14.5 143 79-224 56-227 (306)
306 3s94_A LRP-6, low-density lipo 96.6 0.26 9E-06 41.7 24.4 197 21-223 349-552 (619)
307 2ism_A Putative oxidoreductase 96.5 0.19 6.6E-06 39.2 20.1 58 152-210 270-333 (352)
308 3ei3_A DNA damage-binding prot 96.5 0.3 1E-05 44.6 18.5 145 74-222 839-999 (1158)
309 3ii7_A Kelch-like protein 7; p 96.5 0.17 5.8E-06 38.4 15.5 186 31-224 55-274 (306)
310 3pbp_A Nucleoporin NUP82; beta 96.4 0.29 9.9E-06 39.3 17.2 128 87-216 39-206 (452)
311 1tl2_A L10, protein (tachylect 96.2 0.079 2.7E-06 38.6 10.2 100 111-216 43-157 (236)
312 4asc_A Kelch repeat and BTB do 96.1 0.31 1.1E-05 37.1 16.8 143 79-224 99-279 (315)
313 3pbp_A Nucleoporin NUP82; beta 96.0 0.31 1E-05 39.2 13.8 113 22-135 67-208 (452)
314 2vpj_A Kelch-like protein 12; 95.7 0.44 1.5E-05 35.9 14.8 143 79-224 63-233 (301)
315 3a9g_A Putative uncharacterize 95.7 0.58 2E-05 36.6 20.4 203 15-222 23-296 (354)
316 3sbq_A Nitrous-oxide reductase 95.4 0.27 9.2E-06 40.9 11.5 110 106-215 320-461 (638)
317 2woz_A Kelch repeat and BTB do 95.3 0.7 2.4E-05 35.2 16.5 142 79-224 110-289 (318)
318 2xn4_A Kelch-like protein 2; s 95.3 0.68 2.3E-05 34.9 15.5 142 79-224 62-231 (302)
319 1zgk_A Kelch-like ECH-associat 95.1 0.8 2.7E-05 34.7 13.5 141 79-224 122-289 (308)
320 2uvk_A YJHT; unknown function, 94.8 0.54 1.8E-05 36.4 11.7 95 31-129 19-128 (357)
321 2uvk_A YJHT; unknown function, 94.7 0.92 3.2E-05 35.1 12.9 135 89-226 168-346 (357)
322 2g8s_A Glucose/sorbosone dehyd 94.6 1.3 4.3E-05 34.6 21.3 153 15-168 12-216 (353)
323 2be1_A Serine/threonine-protei 94.5 0.32 1.1E-05 37.9 9.4 109 80-188 11-138 (339)
324 1zgk_A Kelch-like ECH-associat 94.4 1.2 4.1E-05 33.7 13.2 141 79-224 71-242 (308)
325 3a9g_A Putative uncharacterize 94.4 1.4 4.7E-05 34.4 20.8 60 151-210 260-330 (354)
326 2xzh_A Clathrin heavy chain 1; 94.2 1.5 5.1E-05 34.1 24.4 190 28-228 74-296 (365)
327 3s25_A Hypothetical 7-bladed b 94.2 1.4 4.8E-05 33.6 15.1 162 29-210 22-202 (302)
328 1cru_A Protein (soluble quinop 93.9 2.1 7.3E-05 34.7 18.4 111 14-127 20-162 (454)
329 1tl2_A L10, protein (tachylect 93.8 1.4 4.8E-05 32.1 16.5 138 67-213 41-201 (236)
330 2be1_A Serine/threonine-protei 93.7 0.37 1.3E-05 37.5 8.5 110 121-230 11-138 (339)
331 4asc_A Kelch repeat and BTB do 93.7 1.7 6E-05 32.9 15.9 144 78-224 45-223 (315)
332 3ei3_A DNA damage-binding prot 93.4 4.7 0.00016 37.0 20.6 128 91-221 494-635 (1158)
333 2xzh_A Clathrin heavy chain 1; 93.0 2.5 8.5E-05 32.9 18.5 131 88-223 48-190 (365)
334 3das_A Putative oxidoreductase 92.8 2.8 9.5E-05 32.7 17.4 152 14-168 25-220 (347)
335 3sbq_A Nitrous-oxide reductase 91.9 1.5 5E-05 36.7 9.7 100 70-169 326-454 (638)
336 4gq2_M Nucleoporin NUP120; bet 91.3 0.37 1.3E-05 43.0 6.3 38 193-230 237-274 (950)
337 4fhn_B Nucleoporin NUP120; pro 91.2 1.6 5.6E-05 39.8 10.4 37 194-230 240-276 (1139)
338 2zwa_A Leucine carboxyl methyl 91.1 6.9 0.00023 33.6 18.2 192 30-224 396-637 (695)
339 1bpo_A Protein (clathrin); cla 91.0 5.4 0.00019 32.4 23.0 191 27-228 72-295 (494)
340 2zwa_A Leucine carboxyl methyl 90.8 5.8 0.0002 34.1 13.1 146 79-224 398-579 (695)
341 1cru_A Protein (soluble quinop 89.8 6.9 0.00023 31.7 19.8 100 67-168 27-162 (454)
342 2woz_A Kelch repeat and BTB do 88.9 6.2 0.00021 29.8 15.8 143 78-223 56-232 (318)
343 3das_A Putative oxidoreductase 86.8 9.5 0.00033 29.7 19.9 141 66-208 31-218 (347)
344 3f7f_A Nucleoporin NUP120; nuc 86.0 1.7 5.7E-05 37.4 6.3 35 194-230 224-258 (729)
345 3s25_A Hypothetical 7-bladed b 84.5 11 0.00039 28.5 18.0 140 26-179 109-254 (302)
346 1xi4_A Clathrin heavy chain; a 84.4 10 0.00035 35.7 10.8 130 89-223 48-189 (1630)
347 2wg3_C Hedgehog-interacting pr 82.3 19 0.00063 29.3 13.7 104 109-212 14-159 (463)
348 2g8s_A Glucose/sorbosone dehyd 76.6 24 0.00082 27.2 21.7 50 160-209 288-340 (353)
349 3ott_A Two-component system se 71.7 48 0.0016 28.5 24.7 189 20-223 62-261 (758)
350 4a9v_A PHOX; hydrolase, beta-p 70.0 34 0.0012 28.7 9.2 59 152-210 478-549 (592)
351 4gq2_M Nucleoporin NUP120; bet 69.4 12 0.00041 33.5 6.9 38 68-106 237-274 (950)
352 1xi4_A Clathrin heavy chain; a 69.0 81 0.0028 30.0 14.1 47 154-200 263-309 (1630)
353 3uc1_A DNA gyrase subunit A; D 67.8 39 0.0013 25.9 18.2 144 79-222 109-279 (327)
354 3f7f_A Nucleoporin NUP120; nuc 64.4 16 0.00055 31.5 6.4 37 68-107 223-259 (729)
355 3no0_A DNA gyrase subunit A; D 64.4 42 0.0014 25.0 19.1 156 66-223 67-247 (276)
356 1bpo_A Protein (clathrin); cla 64.2 58 0.002 26.6 21.8 175 41-221 124-330 (494)
357 4fhn_B Nucleoporin NUP120; pro 58.4 11 0.00039 34.4 4.8 38 69-107 240-277 (1139)
358 3zwu_A Alkaline phosphatase PH 57.8 60 0.002 27.4 8.6 58 152-209 478-548 (592)
359 1sr4_A CDT A, cytolethal diste 56.9 50 0.0017 23.5 7.4 96 129-230 68-167 (206)
360 3zwu_A Alkaline phosphatase PH 54.1 90 0.0031 26.3 9.1 57 112-168 479-549 (592)
361 1q47_A Semaphorin 3A; beta pro 48.8 1.1E+02 0.0038 25.1 9.3 71 22-93 405-487 (495)
362 2wg3_C Hedgehog-interacting pr 42.3 1.4E+02 0.0046 24.2 13.5 103 67-170 14-159 (463)
363 4a9v_A PHOX; hydrolase, beta-p 39.1 1.7E+02 0.006 24.6 8.9 56 113-168 480-549 (592)
364 4gz8_A Semaphorin-3A; multi-do 37.4 2E+02 0.0067 24.7 10.6 71 22-93 413-495 (667)
365 3ott_A Two-component system se 36.0 2.1E+02 0.0071 24.5 24.3 194 21-223 324-546 (758)
366 1sqj_A OXG-RCBH, oligoxylogluc 33.9 2.4E+02 0.0081 24.6 16.2 62 66-127 14-83 (789)
367 3b7f_A Glycosyl hydrolase, BNR 33.7 1.6E+02 0.0056 22.7 21.1 74 20-94 54-143 (394)
368 1wp5_A Topoisomerase IV; broke 33.6 1.6E+02 0.0054 22.5 18.4 191 30-222 3-225 (323)
369 1suu_A DNA gyrase subunit A; t 33.5 1.5E+02 0.0053 22.3 21.5 190 30-222 6-231 (312)
370 1ukf_A Avirulence protein AVRP 30.8 65 0.0022 22.5 3.9 31 195-225 122-153 (188)
371 1q47_A Semaphorin 3A; beta pro 29.3 1.9E+02 0.0064 23.7 7.1 54 164-217 424-487 (495)
372 3al9_A Plexin-A2; beta-propell 24.8 2.8E+02 0.0096 23.0 7.5 72 21-93 400-476 (539)
373 1olz_A Semaphorin 4D; developm 22.2 3.7E+02 0.013 23.0 8.2 72 22-93 398-477 (663)
374 1uhe_A Aspartate 1-decarboxyla 21.7 68 0.0023 19.7 2.4 18 213-230 17-34 (97)
375 1vc3_B L-aspartate-alpha-decar 20.9 73 0.0025 19.5 2.4 18 213-230 18-35 (96)
376 3nvq_A Semaphorin-7A; beta-pro 20.3 3.3E+02 0.011 22.9 7.0 56 163-218 382-445 (590)
No 1
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-38 Score=248.76 Aligned_cols=219 Identities=18% Similarity=0.256 Sum_probs=187.6
Q ss_pred cceeeeCccccEEEEEECcCC-CEEEEEeCCCCEEEEecccCCCC-ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 12 HSREYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~-~~l~s~~~D~~v~vW~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
...++.+|.+.|++++|+|++ ++|+||+.|++|++|++...... ......+.+|...|.+++|+|++ .+|++|+.|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~ 87 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDK 87 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCC
Confidence 346789999999999999975 89999999999999998643221 12234678999999999999975 6889999999
Q ss_pred eEEEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCC------CC
Q 026765 90 TVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMT------GE 162 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~------~~ 162 (233)
+|++||+.++++...+.. ...+.+++|+|++.++++++.|+.+++||++.........+...+..+.+.|. +.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 999999999988776654 35677899999999999999999999999975443333345567889999885 44
Q ss_pred EEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 163 MFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
.+++++.|+.+++||.++.+....+.+|...|.+++|+|++++|++|+.||.|+|||+.++++++++..
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 899999999999999999998888999999999999999999999999999999999999999888764
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=248.55 Aligned_cols=217 Identities=20% Similarity=0.329 Sum_probs=187.5
Q ss_pred ceeeeCccccEEEEEECcC----CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC
Q 026765 13 SREYTGHKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~----~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 88 (233)
.+.+.+|.+.|++++|+|+ +.+|+||+.|++|+||++.... ......+.+|...|.+++|+|++ .++++|+.|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~--~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D 101 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER--LDLQWSLEGHQLGVVSVDISHTL-PIAASSSLD 101 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECSSS-SEEEEEETT
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC--eeeeeeeccCCCCEEEEEECCCC-CEEEEEeCC
Confidence 3566799999999999985 5789999999999999986421 12334678999999999999975 588999999
Q ss_pred CeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEE
Q 026765 89 KTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFL 166 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 166 (233)
+.|++||+.++++...+... ....+++|+|+++++++++.++.+.+||+++.+...... ....+.+++|+|+++++++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 99999999999877766543 445679999999999999999999999998877665543 3456899999999999999
Q ss_pred EeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 167 TTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 167 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
++.|+.+++||.++++.+..+.+|...|.+++|+|++++|++|+.|+.|+|||+..+.++.++.++
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h 247 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 247 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999998887654
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-38 Score=255.91 Aligned_cols=215 Identities=25% Similarity=0.414 Sum_probs=191.2
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|.++|++++|+|++++|+||+.|++|+|||+.... ....+.+|...|.+++|+|++ .+|++|+.|++|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~----~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD----FERTLKGHTDSVQDISFDHSG-KLLASCSADMTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC----CCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----EEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEE
Confidence 45788999999999999999999999999999999987533 223578999999999999975 6889999999999
Q ss_pred EEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCC
Q 026765 93 LWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 93 iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+||+.++++...+.. ...+.+++|+|+++++++++.|+.+++||+++...+.... +...+..+.++++++++++++.|
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 999998887766554 3567789999999999999999999999999887766544 45568999999999999999999
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCC--------------------CCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM--------------------GRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~--------------------~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.+++||..+.+....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.++.++++|.
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 99999999999888889999999999999996 6789999999999999999999999987
Q ss_pred cC
Q 026765 231 KL 232 (233)
Q Consensus 231 ~~ 232 (233)
++
T Consensus 336 ~h 337 (410)
T 1vyh_C 336 GH 337 (410)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5e-38 Score=244.93 Aligned_cols=216 Identities=18% Similarity=0.256 Sum_probs=185.1
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+.+.+|..+|++++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|++|
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v 121 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTV 121 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCE
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc----EEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeE
Confidence 346788999999999999999999999999999999986532 334678999999999999985 578999999999
Q ss_pred EEEECCCCe-eeeeeee-cCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECC--CCCEE
Q 026765 92 RLWDARSGK-CSQQAEL-SGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNM--TGEMF 164 (233)
Q Consensus 92 ~iwd~~~~~-~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~ 164 (233)
++||++++. ....+.. ...+.+++|+| ++..+++|+.|+.|++||++......... ....+..+.|.+ +++++
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 999998774 3333333 35577899999 67899999999999999998766554433 234678888876 67899
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
++++.|+.+++||.++.+.+..+.+|...|.+++|+|++++|++|+.||+|+|||+.++++++++...
T Consensus 202 ~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred EEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888643
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=247.89 Aligned_cols=214 Identities=22% Similarity=0.354 Sum_probs=190.6
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~i 93 (233)
..+.+|...|++++|++++.+++||+.|++|++||+.... ....+..|...+.+++|+|++ .+|++|+.|+.|++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~----~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK----QIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNI 148 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC----EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEE
Confidence 3578999999999999999999999999999999986421 233567788899999999985 67889999999999
Q ss_pred EECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCCC
Q 026765 94 WDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNG 171 (233)
Q Consensus 94 wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 171 (233)
||+++++....+... ..+.+++|+|++++|++++.|+.|++||+++.+.+.... +..++.+++|+|+++++++++.|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 999988876665544 456789999999999999999999999999988776654 456799999999999999999999
Q ss_pred eEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.+++||.+..+....+.+|...|.+++|+|++++|++|+.|++|+|||+.+++++++|.++
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h 289 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 289 (321)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence 9999999998888999999999999999999999999999999999999999999998764
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.9e-38 Score=244.96 Aligned_cols=216 Identities=16% Similarity=0.214 Sum_probs=184.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..++|.+|.+.|++++|+|++++|+||+.|++|++||+... .....+.+|..+|.+++|+|++ ++|++|+.|+.|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i 79 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ----VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRI 79 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC----ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEE
Confidence 45689999999999999999999999999999999998642 1334677899999999999975 688999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeee-ee-ecCceeeEEEECC-CCCEEEEE
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIH-RR-KFGYEVNEIAWNM-TGEMFFLT 167 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~~~~~ 167 (233)
++||+.++++...+..+ ..+.+++|+|++.++++|+.|+.|++||+++..... .. .+...+.+++|+| ++..++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 99999999887766644 557789999999999999999999999998763332 22 2456799999999 67899999
Q ss_pred eCCCeEEEEecCCceeeeEEe-eecCceeEEEECC--CCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 168 TGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 168 ~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p--~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.|+.+++||.....+...+. .|...+..++|+| ++++|++|+.|++|+|||++++++++++.++
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 999999999998776665554 4667899999987 6789999999999999999999999998865
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=251.44 Aligned_cols=204 Identities=18% Similarity=0.242 Sum_probs=172.7
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.+.+|.+.|++|+|+|+|++|+||+.|++|++||+... .....+.+|...|.+++|+|++..+|++|+.|++|++|
T Consensus 122 ~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~----~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iw 197 (344)
T 4gqb_B 122 CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ----VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLW 197 (344)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccc
Confidence 35689999999999999999999999999999998642 23346789999999999999988889999999999999
Q ss_pred ECCCCeeeeeeeec---CCeeEEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCC-CEEEEEe
Q 026765 95 DARSGKCSQQAELS---GENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTG-EMFFLTT 168 (233)
Q Consensus 95 d~~~~~~~~~~~~~---~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 168 (233)
|++++++...+... ..+.+++|+|+ ++++++|+.|+.|++||+++.+.+..+. +...+.+++|+|++ +++++++
T Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp ETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred cccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 99998876655332 34567999985 5678899999999999999888776654 45679999999998 5788999
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCC-EEEEeeCCCcEEEEecCCc
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~~ 223 (233)
.|+++++||..+++.+ .+.+|...|++++|+|+++ +|++||.|++|++|++.+.
T Consensus 278 ~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 278 EDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9999999999887754 5689999999999999986 5789999999999999764
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-38 Score=255.22 Aligned_cols=216 Identities=22% Similarity=0.366 Sum_probs=190.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+++.+|.+.|++++|+|++++|+||+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTI 216 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC----EEECCCCCSSCEEEEEECSSS-SEEEEEETTSEE
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeE
Confidence 346788999999999999999999999999999999986422 233567999999999999975 678999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-ecCceeeEEEECCC---------
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMT--------- 160 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~--------- 160 (233)
++||++++.+...+..+ ..+..+.++|++.++++++.|+.+++||+++.+..... .+...+.+++|+|+
T Consensus 217 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred EEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhh
Confidence 99999999887776544 44667899999999999999999999999887766544 34567999999986
Q ss_pred -----------CCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 161 -----------GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 161 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
++++++++.|+.+++||..+++++..+.+|...|.+++|+|++++|++|+.||.|+|||+.++++++++
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 678999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ecC
Q 026765 230 TKL 232 (233)
Q Consensus 230 ~~~ 232 (233)
..+
T Consensus 377 ~~h 379 (410)
T 1vyh_C 377 NAH 379 (410)
T ss_dssp ECC
T ss_pred cCC
Confidence 765
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=247.89 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=176.0
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
.|...|++++|+|+ ..|++|+.||+|+|||++...........+.+|.+.|.+++|+|++ ++|++|+.|++|++||++
T Consensus 80 ~~~~~v~~~~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECC
Confidence 46788999999998 4788999999999999976443333444567999999999999975 688999999999999999
Q ss_pred CCeeeeeeee-cCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCCeeeeeee---cCceeeEEEECCC-CCEEEEEeCCC
Q 026765 98 SGKCSQQAEL-SGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMT-GEMFFLTTGNG 171 (233)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~ 171 (233)
++++...+.. ...+.+++|+|++. .+++++.|+.|++||+++.+...... ....+.+++|+|+ ++++++++.|+
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 9988877764 45677899999885 67899999999999999887766543 2346889999985 56788899999
Q ss_pred eEEEEecCCceeeeEEeeecCceeEEEECCCC-CEEEEeeCCCcEEEEecCCcEEEE
Q 026765 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCVR 227 (233)
Q Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~las~s~dg~v~iwd~~~~~~i~ 227 (233)
.+++||.++++++..+.+|...|++++|+|++ ++||+|+.|++|+|||+..+++++
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999999999999999999999999999998 579999999999999999988764
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-37 Score=245.19 Aligned_cols=212 Identities=23% Similarity=0.359 Sum_probs=178.0
Q ss_pred CCCccceeeeCccccEEEEEE-----Cc-CCCEEEEEeCCCCEEEEecccCCCC---ceeeEEEecCcCcEEEEEEcCCC
Q 026765 8 FKNLHSREYTGHKKKVHSVAW-----NC-TGTKLASGSVDQTARVWHIEPHGHG---KVKDIELRGHADSVDQLCWDPKH 78 (233)
Q Consensus 8 ~~~~~~~~~~~H~~~V~~~~~-----~~-~~~~l~s~~~D~~v~vW~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~ 78 (233)
+......++.+|.+.|++++| ++ ++++|+||+.|++|++|++...... ......+.+|...|.+++|+|++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 444456789999999999999 76 8999999999999999998643221 12334678999999999999975
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee---ecCceeeE
Q 026765 79 ADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR---KFGYEVNE 154 (233)
Q Consensus 79 ~~~l~sg~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~ 154 (233)
.++++|+.|++|++||++++++...+.. ...+.+++|+|+++++++++.|+.+++||+......... .+...+.+
T Consensus 89 -~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 89 -CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp -TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred -CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 6889999999999999999887776654 456778999999999999999999999999754332222 23456899
Q ss_pred EEECCCC----------CEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 155 IAWNMTG----------EMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 155 ~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
+.|+|++ +++++++.|+.+++|| ...+....+.+|...|.+++|+|++++|++|+.||.|+|||+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999987 7899999999999999 4566777888999999999999999999999999999999994
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-36 Score=236.64 Aligned_cols=215 Identities=25% Similarity=0.458 Sum_probs=187.9
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
..++.+|.+.|++++|+|++++|++|+.|+.|++|++.... ....+.+|...|.+++|+|++ ++|++|+.|+.|+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~ 90 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLK 90 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCC-CEEEEECCCCEEE
Confidence 35788999999999999999999999999999999986422 234578999999999999975 6889999999999
Q ss_pred EEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCC
Q 026765 93 LWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+||++++++...+..+ ..+.+++|+|+++++++++.|+.+++||+++.+.+.... +..++.++.|+++++++++++.|
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9999998877766544 456789999999999999999999999999887766544 45679999999999999999999
Q ss_pred CeEEEEecCCceeeeEEe-eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 171 GTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.+++||.++.+.+..+. .+...+.+++|+|++++|++++.|+.|++||+.+++++++|..+
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 233 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 233 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSS
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEec
Confidence 999999999888777654 45667899999999999999999999999999999999988654
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-36 Score=240.45 Aligned_cols=213 Identities=17% Similarity=0.239 Sum_probs=183.5
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+++.+|.+.|++++|+|++++|+||+.|++|+|||+.... ....++.|...|.+++|+|++ .+|++|+.|+.|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v 121 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC----EEEEEECSSSCEEEEEECTTS-SEEEEEETTCEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC----cceEeecCCccEEEEEECCCC-CEEEEEeCCCeE
Confidence 346789999999999999999999999999999999986432 234567899999999999975 688999999999
Q ss_pred EEEECCCCe----eeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEE
Q 026765 92 RLWDARSGK----CSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFF 165 (233)
Q Consensus 92 ~iwd~~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (233)
++||+.++. ....+. ..+.+.++.|++++ .+++++.|+.+++||+++.+.+.... +...+.+++|+|++++++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 999997653 222232 23456678888776 48899999999999999888776554 456799999999999999
Q ss_pred EEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+++.|+.+++||.++++....+.+|...|++++|+|++++|++|+.||+|+|||++.+.++.++.
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999988887764
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.1e-37 Score=238.47 Aligned_cols=208 Identities=20% Similarity=0.337 Sum_probs=171.0
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCC-CCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~i~ 92 (233)
..+.+|.+.|++++|+|+|++||||+.|++|+||++...... ....+.+|..+|.+++|+|. .+.+|++|+.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~--~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK--LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC--CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE--EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 457899999999999999999999999999999998642211 23467899999999999764 357899999999999
Q ss_pred EEECCCCee--eeeee-ecCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCCee---eeeeecCceeeEEEECCC----
Q 026765 93 LWDARSGKC--SQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKP---IHRRKFGYEVNEIAWNMT---- 160 (233)
Q Consensus 93 iwd~~~~~~--~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~---- 160 (233)
+||+++++. ...+. ....+.+++|+|+ +.+|++++.|+.+++||++.... .....+...+.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 999987743 22222 2356778999997 88999999999999999976532 122234567899999997
Q ss_pred ---------CCEEEEEeCCCeEEEEecCCce----eeeEEeeecCceeEEEECCCC---CEEEEeeCCCcEEEEecCCc
Q 026765 161 ---------GEMFFLTTGNGTVEVLTYPSLR----PLDTVVAHTAGCYCIAIDPMG---RYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 161 ---------~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~v~~i~~~p~~---~~las~s~dg~v~iwd~~~~ 223 (233)
++++++++.|+.+++||.++.+ ....+.+|...|.+++|+|++ ++||+|+.|++|+|||++..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 5789999999999999987644 556788999999999999985 79999999999999999763
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1e-36 Score=242.35 Aligned_cols=203 Identities=20% Similarity=0.381 Sum_probs=179.1
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i 91 (233)
...+.+|.+.|++++|+|++..|+||+.|++|++||++... ....+.+|...|.+++|+|.. +.+|++|+.|+.|
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ----LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 45677899999999999999999999999999999987532 234678999999999998853 4789999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec---CceeeEEEECCCCCEEEEE
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF---GYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 167 (233)
++||++++++...+..+ ..+.+++|+|++.++++++.|+.+++||++..+.+..... ...+.+++|+|++++++++
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE
Confidence 99999999887766543 5577899999999999999999999999998776554432 2367899999999999999
Q ss_pred eCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 168 TGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 168 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
+.|+.+++||..+++.+..+.+|...|.+++|+|++++|++|+.||+|+||+
T Consensus 303 ~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 303 YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999998888888999999999999999999999999999999996
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-36 Score=257.45 Aligned_cols=218 Identities=20% Similarity=0.291 Sum_probs=181.0
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCc----------ee-----------------------
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK----------VK----------------------- 58 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~----------~~----------------------- 58 (233)
..++|.+|.+.|++++|+|+|++||||+.|++|+|||+....... +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 346788999999999999999999999999999999985311100 00
Q ss_pred ---------eEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcC
Q 026765 59 ---------DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNR 128 (233)
Q Consensus 59 ---------~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 128 (233)
...+.+|...|.+++|+|+++..|++|+.|++|++||..++++...+..+ ..+.+++|+|++++|++++.
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 00235678888888898887667899999999999999888776666543 45778999999999999999
Q ss_pred CCcEEEEEcCCCeeeeee--------ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeee---------------
Q 026765 129 DDELTILDVRKFKPIHRR--------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD--------------- 185 (233)
Q Consensus 129 d~~i~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------- 185 (233)
|+.+++||+.+.+..... .+...+.+++|+|+++++++++.|+++++||..+++.+.
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999999999887766544 245679999999999999999999999999988765433
Q ss_pred ----------------------------EEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 186 ----------------------------TVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 186 ----------------------------~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.+.+|...|++++|+|++++|++|+.|++|++||+.++++.+.+
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec
Confidence 33478899999999999999999999999999999998887665
No 16
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8.5e-37 Score=239.94 Aligned_cols=218 Identities=20% Similarity=0.347 Sum_probs=176.8
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCC-CCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~i~ 92 (233)
+.+.+|.+.|++++|+|++++|++|+.|++|++|++............+.+|...|.+++|+|. ++.+|++|+.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 4668999999999999999999999999999999997543322334467899999999999985 357899999999999
Q ss_pred EEECCCCe---------eeeeee-ecCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCCeeee----------------
Q 026765 93 LWDARSGK---------CSQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPIH---------------- 144 (233)
Q Consensus 93 iwd~~~~~---------~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~---------------- 144 (233)
+||++.++ ....+. ....+.+++|+|+ +.++++++.|+.+++||+++.+.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99998763 333333 3456778999999 9999999999999999986533110
Q ss_pred --------------------------------------------ee-ecCceeeEEEECCCC----CEEEEEeCCCeEEE
Q 026765 145 --------------------------------------------RR-KFGYEVNEIAWNMTG----EMFFLTTGNGTVEV 175 (233)
Q Consensus 145 --------------------------------------------~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~ 175 (233)
.. .+...+.+++|+|++ +++++++.||.+++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 00 123468899999998 89999999999999
Q ss_pred EecCCc----------------------------------------------eeeeEEeeecCceeEEEECCCCCEEEEe
Q 026765 176 LTYPSL----------------------------------------------RPLDTVVAHTAGCYCIAIDPMGRYFAVG 209 (233)
Q Consensus 176 ~~~~~~----------------------------------------------~~~~~~~~~~~~v~~i~~~p~~~~las~ 209 (233)
||.+.. +.+..+.+|...|++++|+|++++|++|
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 998653 5666677899999999999999999999
Q ss_pred eCCCcEEEEecCCc---EEEEeeec
Q 026765 210 SADSLVSLWDISEM---LCVRTFTK 231 (233)
Q Consensus 210 s~dg~v~iwd~~~~---~~i~~~~~ 231 (233)
+.||.|+|||+..+ .+++++..
T Consensus 325 ~~dg~v~iw~~~~~~~~~~~~~~~~ 349 (351)
T 3f3f_A 325 GDDGKVRLWKATYSNEFKCMSVITA 349 (351)
T ss_dssp ETTSCEEEEEECTTSCEEEEEEEC-
T ss_pred cCCCcEEEEecCcCcchhheeehcc
Confidence 99999999999976 45555543
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.7e-37 Score=244.59 Aligned_cols=206 Identities=16% Similarity=0.256 Sum_probs=173.5
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
...+|.+.|++++|+|++++|+||+.|++|++||+... .....+.+|...|.+++|+|++..++++++.|+.|++|
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~----~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK----AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEEC
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEE
Confidence 44589999999999999999999999999999998642 23446789999999999999887788999999999999
Q ss_pred ECCCCeeeeeeee---cCCeeEEEECCCC-CeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCC-CEEEEEe
Q 026765 95 DARSGKCSQQAEL---SGENINITYKPDG-THIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTG-EMFFLTT 168 (233)
Q Consensus 95 d~~~~~~~~~~~~---~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 168 (233)
|+++++....... ...+.+++|+|++ .++++|+.|+.|++||+++.+.+.... +...+.+++|+|++ +++++++
T Consensus 210 d~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 210 DTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp CTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred ECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe
Confidence 9998876554433 2346789999974 678899999999999999887766544 45679999999987 5688899
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECC-CCCEEEEeeCCCcEEEEecCCcEE
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
.|+++++||.++++.+.. .+|...|++++|+| ++++|++|+.||+|++||+.+...
T Consensus 290 ~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 290 EDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp TTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred CCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 999999999998877654 47999999999999 789999999999999999975433
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-36 Score=238.12 Aligned_cols=218 Identities=19% Similarity=0.224 Sum_probs=184.7
Q ss_pred CCCccceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC
Q 026765 8 FKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (233)
Q Consensus 8 ~~~~~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 87 (233)
+.....+++.+|.+.|++++|+|++++|+|||.|++|+|||..+.. ....+..|...|.+++|+|++ .++++|+.
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~~~~v~~~~~sp~g-~~lasg~~ 126 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN----KEHAVTMPCTWVMACAYAPSG-CAIACGGL 126 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCEEEECTTS-SEEEEEST
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC----cceEEecCCCCEEEEEECCCC-CEEEEeeC
Confidence 3334457899999999999999999999999999999999986432 223466788999999999985 68899999
Q ss_pred CCeEEEEECCCCe------eeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECC
Q 026765 88 DKTVRLWDARSGK------CSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNM 159 (233)
Q Consensus 88 d~~i~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~ 159 (233)
|+.+++|++.... ....+. ....+.+++|+|++..+++++.|+.+++||+++.+.+.... +...+.++.++|
T Consensus 127 d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 9999999986431 112222 33456789999999999999999999999999888776654 456788888877
Q ss_pred --CCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 160 --TGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 160 --~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+++++++++.|+.+++||.++++++..+.+|...|++++|+|++++|++|+.|++|++||++...++..+.
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS 279 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 46899999999999999999999999999999999999999999999999999999999999888777664
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=240.20 Aligned_cols=207 Identities=24% Similarity=0.409 Sum_probs=171.8
Q ss_pred cceeeeCccc-cEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 12 HSREYTGHKK-KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 12 ~~~~~~~H~~-~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
...++.+|.+ .|++++|+|+|++||||+.|++|+||++..... ........+|...|.+++|+|++ .+|++|+.|+.
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeeccccCCcEEEEEECCCC-CEEEEEECCCc
Confidence 3467889988 999999999999999999999999999864211 11122236899999999999975 68899999999
Q ss_pred EEEEECCCCe--eeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeee---eee-ecCceeeEEEECCCCCE
Q 026765 91 VRLWDARSGK--CSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI---HRR-KFGYEVNEIAWNMTGEM 163 (233)
Q Consensus 91 i~iwd~~~~~--~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~-~~~~~~~~~~~~~~~~~ 163 (233)
+++||+..+. +...+.. ...+.+++|+|++++|++++.|+.+++||++..... ... .+...+.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999998764 3333332 356778999999999999999999999999765432 222 23457999999999999
Q ss_pred EEEEeCCCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEec
Q 026765 164 FFLTTGNGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~ 220 (233)
+++++.|+.+++|+.+..+ ....+.+|...|++++|+|++++|++|+.|++|+|||.
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 9999999999999987664 45678899999999999999999999999999999996
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.4e-36 Score=236.89 Aligned_cols=218 Identities=19% Similarity=0.282 Sum_probs=187.4
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+..|...|.+++|+|++++|++|+.|+.|++|++............+.+|...|.++.|++++ .+++++.|+.|+
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~ 167 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCA 167 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEE
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEE
Confidence 456788999999999999999999999999999999875432223344678999999999998864 478999999999
Q ss_pred EEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCC
Q 026765 93 LWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 93 iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+||++++++...+.. ...+.+++|+|+++++++|+.|+.+++||+++........ +...+.+++|+|+++++++++.|
T Consensus 168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 999999987776654 3567789999999999999999999999999877665544 45679999999999999999999
Q ss_pred CeEEEEecCCceeeeEEee--ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 171 GTVEVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~--~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.+++||.+..+.+..+.. +...|.+++|+|++++|++|+.||.|+|||+.++.++.++.++
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC
Confidence 9999999988877666542 2347999999999999999999999999999999999888765
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-36 Score=241.47 Aligned_cols=207 Identities=25% Similarity=0.376 Sum_probs=179.3
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
..|++++|+|+|++|++|+.|++|+|||+... .....+.+|...|.+++|+|++ ..|++|+.|+.|++||+++++
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENR----KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCC----cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCe
Confidence 35999999999999999999999999998642 1334678999999999999985 578899999999999999998
Q ss_pred eeeeeeecCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeeee--------ecCceeeEEEECCCCCEEEEEeCCC
Q 026765 101 CSQQAELSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRR--------KFGYEVNEIAWNMTGEMFFLTTGNG 171 (233)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (233)
+...+.....+..++++| +++++++++.|+.+++||+++.+.+... .+...+.+++|+|+++++++++.|+
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 877777777788899999 8999999999999999999887665443 2345689999999999999999999
Q ss_pred eEEEEecCCc------------eeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 172 TVEVLTYPSL------------RPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 172 ~v~~~~~~~~------------~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.+++||++.. .....+.+|...|.+++|+|++++|++|+.|+.|++||+.++.++.++..+
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 9999998642 234567789999999999999999999999999999999999999888765
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-37 Score=251.70 Aligned_cols=216 Identities=16% Similarity=0.214 Sum_probs=175.2
Q ss_pred eeeeCccccEEEEEECcC-CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~-~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
+...+|...|+||+|+|. +++||+|+.||+|+|||+.... ......+.+|...|++++|+|.++.+|+||+.|++|+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 356689999999999994 6799999999999999987533 2233456789999999999997778999999999999
Q ss_pred EEECCCCeeeeeeeecC---CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCC-EEEEEe
Q 026765 93 LWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE-MFFLTT 168 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (233)
+||++++........+. ...+++|+|++.+|++|+.|+.|.+||++.........+...+.+++|+|+++ ++++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEec
Confidence 99998765433222222 24568999999999999999999999987543332233456799999999987 577889
Q ss_pred CCCeEEEEecCCceeeeE---EeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 169 GNGTVEVLTYPSLRPLDT---VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~---~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
.|+.+++||++..+.... ..+|...|++++|+|++++|++|+.||.|+|||+.++.+...+..
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 999999999987654333 357999999999999999999999999999999998877666543
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-36 Score=241.69 Aligned_cols=222 Identities=19% Similarity=0.293 Sum_probs=175.0
Q ss_pred CCccceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCc-----------------------------ee-
Q 026765 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGK-----------------------------VK- 58 (233)
Q Consensus 9 ~~~~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~-----------------------------~~- 58 (233)
.....+++.+|.+.|++++|+|++++|+||+.|++|+|||+....... +.
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 334457899999999999999999999999999999999975321000 00
Q ss_pred ---------------eEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeee------ecCCeeEEEEC
Q 026765 59 ---------------DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE------LSGENINITYK 117 (233)
Q Consensus 59 ---------------~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~ 117 (233)
...+.+|...|.++.|.|++...|++|+.|++|++||++++++...+. ....+.+++++
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 001346666677777777656667888889999999988887665442 22345678887
Q ss_pred C-CCCeEEEEcCCCcEEEEEcCCC-eeeeee-ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecC--
Q 026765 118 P-DGTHIAVGNRDDELTILDVRKF-KPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTA-- 192 (233)
Q Consensus 118 ~-~~~~l~~~~~d~~i~i~d~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-- 192 (233)
+ +++++++|+.|+.+++||++.. +.+... .+...+.+++|+|+++++++++.|+++++||.++++.+..+..+..
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 6 8899999999999999999743 333333 2456799999999999999999999999999999888777665432
Q ss_pred -----ceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 193 -----GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 193 -----~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.|.+++|+|+|++|++|+.||.|+|||+..++++.++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~ 337 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG 337 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe
Confidence 48899999999999999999999999999998887773
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=233.71 Aligned_cols=207 Identities=19% Similarity=0.277 Sum_probs=167.1
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEE-ec-CcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RG-HADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
..+++.+|.++|++++|+|+ +||||+.|++|++|++..... . ....+ .+ |...|.+++|+|++ .+|++|+.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-~-~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~ 80 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-T-LIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDS 80 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-E-EEEEECTTCCCSCEEEEEECTTS-SEEEEEETTS
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-E-EEEEEecCCccCCEEEEEECCCC-CEEEEEeCCC
Confidence 35688999999999999987 999999999999999864321 1 12223 34 99999999999975 6889999999
Q ss_pred eEEEEECCCC-------eeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCC----eeeeee-ecCceeeEEE
Q 026765 90 TVRLWDARSG-------KCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKF----KPIHRR-KFGYEVNEIA 156 (233)
Q Consensus 90 ~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~-~~~~~~~~~~ 156 (233)
.|++||+... ++...+. ....+.+++|+|++++|++++.|+.+++||++.. +.+... .+...+.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 9999998532 2233332 2356778999999999999999999999999532 223322 2456799999
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCc--eeeeEEeeecCceeEEEECCC--CCEEEEeeCCCcEEEEecCCc
Q 026765 157 WNMTGEMFFLTTGNGTVEVLTYPSL--RPLDTVVAHTAGCYCIAIDPM--GRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~i~~~p~--~~~las~s~dg~v~iwd~~~~ 223 (233)
|+|+++++++++.|+.+++|+.... +++..+.+|...|.+++|+|+ +.+|++|+.|++|+|||+..+
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 9999999999999999999998655 677888899999999999998 678999999999999999765
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-36 Score=238.62 Aligned_cols=213 Identities=18% Similarity=0.208 Sum_probs=175.2
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
...+|.+.|++++|+|++. +++++.|++|+|||+..............+|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVW 166 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEE
Confidence 3457999999999999875 55678899999999876443333344566899999999999975 678999999999999
Q ss_pred ECCCCeeeeeeeec-CCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCCeeeeeee---cCceeeEEEECCCC-CEEEEEe
Q 026765 95 DARSGKCSQQAELS-GENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTG-EMFFLTT 168 (233)
Q Consensus 95 d~~~~~~~~~~~~~-~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~ 168 (233)
|++++++...+..+ ..+.+++|+|++. .+++++.|+.|++||+++.++..... ....+.+++|+|++ +++++++
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 99999887776543 5667899999875 78899999999999998877665443 23468899999985 5788899
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECCCC-CEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.|+.+++||.++++.+..+.+|...|++++|+|++ ++||+|+.|++|+|||++++++++.+
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 99999999999999999999999999999999987 57999999999999999999988765
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.4e-35 Score=228.81 Aligned_cols=218 Identities=19% Similarity=0.302 Sum_probs=183.8
Q ss_pred ceeeeCccccEEEEEECcC-CCEEEEEeCCCCEEEEecccCCCC-ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 13 SREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~-~~~l~s~~~D~~v~vW~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
..+|.||++.|++|+|+|+ +++|||||.|++|+|||+...... ......+.+|...|.+++|+|++ .+|++|+.|+.
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~ 109 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGT 109 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEccccc
Confidence 3578999999999999998 589999999999999999754322 23344678999999999999975 68899999999
Q ss_pred EEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECCCC--CEEE
Q 026765 91 VRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTG--EMFF 165 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~ 165 (233)
|++|+............. .......+.+++.++++++.|+.+.+||+.......... +...+..++|++++ .+++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 999999888765554443 445567889999999999999999999987655443322 34567888888765 4677
Q ss_pred EEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
+++.|+.+++|+.++.+....+.+|...|++++|+|++++|++|+.||.|+|||+.+..+++.+..
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 889999999999999999999999999999999999999999999999999999999999888764
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=231.27 Aligned_cols=215 Identities=20% Similarity=0.317 Sum_probs=187.2
Q ss_pred ccceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 11 ~~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
.....+.+|.+.|++++|+|++++|++|+.|+.|++||+.... ....+.+|...|.+++|+|++ .+|++++.|+.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~ 97 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE----RLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYS 97 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTS-SEEEEEETTTE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch----hhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCe
Confidence 3446789999999999999999999999999999999986422 334678899999999999974 68899999999
Q ss_pred EEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCC-----CcEEEEEcCCCeee-----------eeee-cCc--e
Q 026765 91 VRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD-----DELTILDVRKFKPI-----------HRRK-FGY--E 151 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~-----------~~~~-~~~--~ 151 (233)
|++||+.++++...+.....+.+++|+|+++++++++.+ +.+.+||+...... .... ... .
T Consensus 98 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 999999999888887777788899999999999999998 99999998654321 1111 111 7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEecCC-ceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 152 VNEIAWNMTGEMFFLTTGNGTVEVLTYPS-LRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.+++|+++++++++++.+|.+.+||.++ .+....+..|...|.+++|+|++++|++++.|+.|++||+.++.+++.+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 88999999999999999999999999988 78888899999999999999999999999999999999999999888775
No 28
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2e-36 Score=237.08 Aligned_cols=207 Identities=20% Similarity=0.338 Sum_probs=163.7
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCC-CCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~i~ 92 (233)
..+.+|.+.|++++|+|+|++||||+.|++|+|||+.... ......+.+|...|.+++|+|. ++.+|+||+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~--~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG--QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE--EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC--cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 4567999999999999999999999999999999986421 1233467899999999999753 356889999999999
Q ss_pred EEECCCCee--eeeee-ecCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCCeee---ee-eecCceeeEEEECCC---
Q 026765 93 LWDARSGKC--SQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPI---HR-RKFGYEVNEIAWNMT--- 160 (233)
Q Consensus 93 iwd~~~~~~--~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~---~~-~~~~~~~~~~~~~~~--- 160 (233)
+||+++++. ...+. ....+.+++|+|+ +.+|++++.|+.+++||++..... .. ..+...+..+.|+|+
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 999988743 33332 3345778999998 789999999999999999765321 11 123346788999987
Q ss_pred --------------CCEEEEEeCCCeEEEEecCCc---eeeeEEeeecCceeEEEECCCC----CEEEEeeCCCcEEEEe
Q 026765 161 --------------GEMFFLTTGNGTVEVLTYPSL---RPLDTVVAHTAGCYCIAIDPMG----RYFAVGSADSLVSLWD 219 (233)
Q Consensus 161 --------------~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~i~~~p~~----~~las~s~dg~v~iwd 219 (233)
++++++++.|+.+++|+.+.. +....+.+|...|.+++|+|++ ++||+|+.|++|+|||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 478999999999999998754 4667788999999999999986 7899999999999999
Q ss_pred cCC
Q 026765 220 ISE 222 (233)
Q Consensus 220 ~~~ 222 (233)
+.+
T Consensus 245 ~~~ 247 (316)
T 3bg1_A 245 CDD 247 (316)
T ss_dssp CSS
T ss_pred ccC
Confidence 876
No 29
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.8e-35 Score=227.23 Aligned_cols=216 Identities=24% Similarity=0.419 Sum_probs=184.9
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
....+.+|...|++++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i 131 (312)
T 4ery_A 57 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESV 131 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCE
T ss_pred cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcE
Confidence 346778999999999999999999999999999999986432 234578999999999999975 688999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECCCCCEEEEEe
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 168 (233)
++||++++++...+..+ ..+.+++|+|+++++++++.|+.+++||+++.+.+.... ....+..++|+|+++++++++
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 99999998877766544 456789999999999999999999999999877665543 235688999999999999999
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeE--EE-ECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYC--IA-IDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~--i~-~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.|+.+++||.++++.+..+.+|...+.+ .. ..+++.+|++|+.||.|++||+.++++++++.++
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 278 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCC
T ss_pred CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhcc
Confidence 9999999999999998888888765433 23 3467889999999999999999999999998765
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.3e-35 Score=250.62 Aligned_cols=216 Identities=19% Similarity=0.294 Sum_probs=185.1
Q ss_pred eeeeCccccEEEEEECcCC-CEEEEEeCCCCEEEEecccCCCC-ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 14 REYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~-~~l~s~~~D~~v~vW~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+.+|++.|++|+|+|++ ++|+|||.|++|++|++...... ......+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcE
Confidence 4688999999999999875 78999999999999998653321 23344678999999999999975 688999999999
Q ss_pred EEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee----ecCceeeEEEECCCC--CEE
Q 026765 92 RLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR----KFGYEVNEIAWNMTG--EMF 164 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~ 164 (233)
++||+.++++...+.. ...+.+++|+|++++|++++.|+.|++||+......... .+...+.+++|+|++ ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9999999987776654 456778999999999999999999999998654433221 133458999999987 579
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
++++.|+.+++||.++.+....+.+|...|.+++|+|++++|++|+.||.|+|||+.++++++++.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 999999999999999988888999999999999999999999999999999999999999887764
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-34 Score=225.81 Aligned_cols=210 Identities=17% Similarity=0.300 Sum_probs=177.0
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
.+.+.+|...|++++|+|++++|+||+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+.|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE----TYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIK 132 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEE
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC----eeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEE
Confidence 46788999999999999999999999999999999986421 334678999999999999975 6889999999999
Q ss_pred EEECCCCeeeeeee-ecCCeeEEEECCC------CCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEE
Q 026765 93 LWDARSGKCSQQAE-LSGENINITYKPD------GTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 93 iwd~~~~~~~~~~~-~~~~~~~~~~~~~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 164 (233)
+||++... ...+. ....+..+.+.|. +..+++++.|+.+++||+++.+...... +...+.+++|+|+++++
T Consensus 133 vwd~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 133 VWTIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp EEETTSCE-EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred EEECCCCe-EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence 99997543 33333 3455667888884 4589999999999999999877665433 55679999999999999
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
++++.|+.+++||..+.+.+..+.. ...|.+++|+|++.+|++++.++ +++|++.....+..+.
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLR 275 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccC
Confidence 9999999999999999988888765 46799999999999999887654 9999999888777654
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.9e-36 Score=239.34 Aligned_cols=207 Identities=25% Similarity=0.415 Sum_probs=174.8
Q ss_pred ceeeeCccccEEEEEECcCC-CEEEEEeCCCCEEEEecccCCCCceeeEEE-----ecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 13 SREYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHGKVKDIEL-----RGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~-~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
.+.+.+|.+.|.+++|+|++ ..|+||+.|++|++||+.... .+ ..+ .+|...|.+++|++.++.++++|+
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RI--SIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EE--EEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EE--EEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 35688999999999999974 579999999999999987532 11 122 579999999999887778999999
Q ss_pred CCCeEEEEECCCC-eeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC--------ceeeEEE
Q 026765 87 GDKTVRLWDARSG-KCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG--------YEVNEIA 156 (233)
Q Consensus 87 ~d~~i~iwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------~~~~~~~ 156 (233)
.|+.|++||++.. +....+. ....+.+++|+|++.+|++++.|+.+++||+++.+.+...... ..+.+++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 9999999999843 4444443 3456778999999999999999999999999988776554321 1378999
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCceeeeEE----eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 157 WNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV----VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
|+|+++++++++.||.+++||....+....+ .+|...|.+++|+|++++|++|+.|++|+||++...
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999999999999999999888777666 579999999999999999999999999999999764
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.4e-35 Score=226.27 Aligned_cols=217 Identities=18% Similarity=0.230 Sum_probs=168.1
Q ss_pred cceeeeCccccEEEEEECcC--CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCC
Q 026765 12 HSREYTGHKKKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGD 88 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~--~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d 88 (233)
...++.+|.++|++++|+|+ +++|+||+.|++|+|||+...... ....+.+|...|.+++|+|+. +.+|++|+.|
T Consensus 45 ~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d 122 (297)
T 2pm7_B 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPMLLVASSD 122 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC--CCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE--EEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence 35688999999999999864 899999999999999998753211 223567899999999999973 4688999999
Q ss_pred CeEEEEECCCCeee--eeee-ecCCeeEEEECCC-------------CCeEEEEcCCCcEEEEEcCCCe----eeeeee-
Q 026765 89 KTVRLWDARSGKCS--QQAE-LSGENINITYKPD-------------GTHIAVGNRDDELTILDVRKFK----PIHRRK- 147 (233)
Q Consensus 89 ~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~----~~~~~~- 147 (233)
+.|++||++++... ..+. ....+.+++|+|+ +++|++|+.|+.|++||+++.+ ......
T Consensus 123 ~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~ 202 (297)
T 2pm7_B 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (297)
T ss_dssp SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC
Confidence 99999999876321 2222 2345678999997 5789999999999999997654 222222
Q ss_pred cCceeeEEEECCCC---CEEEEEeCCCeEEEEecCCce---eeeEE--eeecCceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 148 FGYEVNEIAWNMTG---EMFFLTTGNGTVEVLTYPSLR---PLDTV--VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 148 ~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~---~~~~~--~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
+...+.+++|+|++ +++++++.|+.+++|+.+... ....+ ..|...|.+++|+|++++||+++.|+.|+||+
T Consensus 203 H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 203 HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 45579999999985 889999999999999987532 11122 46788999999999999999999999999999
Q ss_pred cC---CcEEEEeee
Q 026765 220 IS---EMLCVRTFT 230 (233)
Q Consensus 220 ~~---~~~~i~~~~ 230 (233)
.. .-+++.++.
T Consensus 283 ~~~~g~w~~~~~~~ 296 (297)
T 2pm7_B 283 ENLEGKWEPAGEVH 296 (297)
T ss_dssp ECTTSCEEEC----
T ss_pred ECCCCcEEeccccc
Confidence 87 235555543
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=233.14 Aligned_cols=217 Identities=23% Similarity=0.380 Sum_probs=167.9
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
..++.+|.+.|++++|+|++++|+||+.|++|++||+..... ......+.+|...|.+++|+|++ .+|++|+.|+.|+
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVK 175 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-EEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEE
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-eEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEE
Confidence 457889999999999999999999999999999999865321 12233577899999999999985 5788999999999
Q ss_pred EEECCCCeee--eeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCe---------------eeeeee--cCcee
Q 026765 93 LWDARSGKCS--QQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFK---------------PIHRRK--FGYEV 152 (233)
Q Consensus 93 iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------------~~~~~~--~~~~~ 152 (233)
+||++.++.. ..+. ....+.+++|+|++++|++++.|+.|++||..... .+.... +...+
T Consensus 176 ~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 255 (345)
T 3fm0_A 176 LYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTI 255 (345)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCE
T ss_pred EEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcE
Confidence 9999887533 3333 23567789999999999999999999999963211 111111 34568
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEecCCce----ee-----eEEeeecCceeEEEECCCC-CEEEEeeCCCcEEEEecCC
Q 026765 153 NEIAWNMTGEMFFLTTGNGTVEVLTYPSLR----PL-----DTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~-----~~~~~~~~~v~~i~~~p~~-~~las~s~dg~v~iwd~~~ 222 (233)
..++|++++..+++++.|+.+++|+..... +. ....+|...|++++|+|++ .+||+|+.||+|++|++.+
T Consensus 256 ~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 256 YDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 999999999999999999999999976432 11 1224688999999999998 4999999999999999999
Q ss_pred cEEEEeeec
Q 026765 223 MLCVRTFTK 231 (233)
Q Consensus 223 ~~~i~~~~~ 231 (233)
.+..+.+++
T Consensus 336 ~~~~~~~~~ 344 (345)
T 3fm0_A 336 PEGLHHHHH 344 (345)
T ss_dssp ---------
T ss_pred CCCcccccC
Confidence 888777654
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.6e-35 Score=233.68 Aligned_cols=215 Identities=13% Similarity=0.160 Sum_probs=177.8
Q ss_pred ceeeeCccccEEEEEECcCC-CEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~-~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
.+.+.+|.+.|++++|+|++ ++|++|+.|++|+|||+.... ........+|...|.+++|+|+++.+|++|+.|+.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 35678999999999999999 999999999999999987432 223333457999999999999656789999999999
Q ss_pred EEEECCCCeeeeeeeec---CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-ecCceeeEEEECCCCC-EEEE
Q 026765 92 RLWDARSGKCSQQAELS---GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGE-MFFL 166 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~ 166 (233)
++||++........... ..+.+++|+|+++++++++.|+.+.+||++ .+.+... .+...+.+++|+|+++ ++++
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 99999864332222222 446789999999999999999999999995 4444433 3567899999999999 8999
Q ss_pred EeCCCeEEEEecCC----ceeeeEEeeecCceeEEEECC-CCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 167 TTGNGTVEVLTYPS----LRPLDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 167 ~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~i~~~p-~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
++.|+.+++||.++ .+.+..+ +|...|.+++|+| ++++|++++.|+.|+|||++++.+++++..
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEE
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccc
Confidence 99999999999986 4455555 7999999999999 999999999999999999998877666653
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-35 Score=229.26 Aligned_cols=209 Identities=20% Similarity=0.339 Sum_probs=159.2
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
....+.+|.+.|++++|+|++++|+||+.|++|++||+............+.+|...|.+++|+|++ .+|++|+.|++|
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i 177 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTV 177 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeE
Confidence 3457889999999999999999999999999999999853222222334578999999999999975 688999999999
Q ss_pred EEEECCCC--eeeeeeee-cCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCC--------eeeeeee--cCceeeEEE
Q 026765 92 RLWDARSG--KCSQQAEL-SGENINITYKPD--GTHIAVGNRDDELTILDVRKF--------KPIHRRK--FGYEVNEIA 156 (233)
Q Consensus 92 ~iwd~~~~--~~~~~~~~-~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~--~~~~~~~~~ 156 (233)
++||...+ ++...+.. ...+.+++|+|+ +.++++++.|+.|++||++.. ....... +...+.+++
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 257 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVA 257 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEE
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEE
Confidence 99998776 34444433 356778999998 678999999999999998643 1122221 445799999
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCce--eeeE-EeeecC-ceeEEEECC--CCCEEEEeeCCCcEEEEecCC
Q 026765 157 WNMTGEMFFLTTGNGTVEVLTYPSLR--PLDT-VVAHTA-GCYCIAIDP--MGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~-~~~~~~-~v~~i~~~p--~~~~las~s~dg~v~iwd~~~ 222 (233)
|+++ .++++++.||.+++|+..+++ .... +.+|.. .|++++|+| ++++||+|+.||+|+|||++.
T Consensus 258 ~s~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 258 WGFN-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ECTT-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCC-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9965 489999999999999987653 3333 346776 899999999 689999999999999999875
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-34 Score=231.69 Aligned_cols=200 Identities=21% Similarity=0.353 Sum_probs=169.1
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecC------------------cCcEEEEEEcCCCC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH------------------ADSVDQLCWDPKHA 79 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~ 79 (233)
+|.+.|++++|+|+|++||+|+ |++++||++.... . ...+.+| ...|.+++|+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg- 135 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGS--L--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG- 135 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCC--E--EEEECC-----------------CCCCBEEEEEECTTS-
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCC--E--EEEecCccccccccccccccccCCCceeEEEEEECCCC-
Confidence 6999999999999999999977 7899999986432 1 1122222 2359999999975
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEEC
Q 026765 80 DLIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWN 158 (233)
Q Consensus 80 ~~l~sg~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 158 (233)
.+|++|+.|+.|++||+.+++....+..+ ..+.+++|+|++.+|++++.|+.+++||+++.+..........+..++|+
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 215 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 215 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEE
Confidence 68899999999999999998877666543 55778999999999999999999999999998877766667789999999
Q ss_pred C-CCCEEEEEeCCCeEEEEecCCceeeeEE-------eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 159 M-TGEMFFLTTGNGTVEVLTYPSLRPLDTV-------VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 159 ~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
| +++++++++.|+.+++||.++++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||+...
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9 8999999999999999999887776665 578899999999999999999999999999999753
No 38
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=225.74 Aligned_cols=217 Identities=22% Similarity=0.319 Sum_probs=177.8
Q ss_pred ceeeeCccccEEEEEECcC---CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 13 SREYTGHKKKVHSVAWNCT---GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~---~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
.+.+.+|.+.|++++|+|+ |++|++|+.|+.|++|++.... ......+.+|...|.+++|+|++ .+|++|+.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 108 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDK 108 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEEEEEEEECSSCEEEEEECTTS-SEEEEEETTS
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--ceeEEEeccccCCEEEEEECcCC-CEEEEEcCCC
Confidence 3477899999999999999 5999999999999999997522 22334678899999999999975 6788999999
Q ss_pred eEEEEECCCCeeeeeeeecCCeeEEEE--CCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC------------------
Q 026765 90 TVRLWDARSGKCSQQAELSGENINITY--KPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG------------------ 149 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------ 149 (233)
.|++||+++++..........+.+++| +|++.++++++.|+.+++||+++.+.+......
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA 188 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC
Confidence 999999999988776666677888999 999999999999999999999876654433321
Q ss_pred ------------------------ceeeEEEECCCCCE----EEEEeCCCeEEEEecCCc---eeeeEEeeecC------
Q 026765 150 ------------------------YEVNEIAWNMTGEM----FFLTTGNGTVEVLTYPSL---RPLDTVVAHTA------ 192 (233)
Q Consensus 150 ------------------------~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~------ 192 (233)
.....+.+.++... +++++.++.+++|+.+.. +....+.+|..
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 12233333333333 899999999999999876 45666677765
Q ss_pred ------ceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 193 ------GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 193 ------~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.|.+++|+|++++|++|+.||.|+|||+.++++++++..+
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 314 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL 314 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCC
Confidence 7999999999999999999999999999999999988764
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-34 Score=226.81 Aligned_cols=217 Identities=22% Similarity=0.337 Sum_probs=170.3
Q ss_pred ceeeeCccccEEEEEECc--CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCC
Q 026765 13 SREYTGHKKKVHSVAWNC--TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~--~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~ 89 (233)
..++.+|.+.|++++|+| ++++|+||+.|++|++||+..... .....+.+|...|.+++|+|++ +.+|++|+.|+
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 457889999999999986 489999999999999999864321 2334578899999999999973 46889999999
Q ss_pred eEEEEECCCCeee---eeee-ecCCeeEEEECCC-----------------CCeEEEEcCCCcEEEEEcCCC---eeeee
Q 026765 90 TVRLWDARSGKCS---QQAE-LSGENINITYKPD-----------------GTHIAVGNRDDELTILDVRKF---KPIHR 145 (233)
Q Consensus 90 ~i~iwd~~~~~~~---~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~---~~~~~ 145 (233)
.|++||++.+... .... ....+.+++|+|+ +.+|++|+.|+.|++||++.. +....
T Consensus 128 ~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 128 AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 9999999875321 1111 1234556889887 468999999999999999754 23322
Q ss_pred ee-cCceeeEEEECCCC----CEEEEEeCCCeEEEEecCCc---e-eeeEEeeecCceeEEEECCCCCEEEEeeCCCcEE
Q 026765 146 RK-FGYEVNEIAWNMTG----EMFFLTTGNGTVEVLTYPSL---R-PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (233)
Q Consensus 146 ~~-~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~ 216 (233)
.. +...+.+++|+|++ +++++++.|+++++|+..+. + ....+..|...|++++|+|++++||+|+.|++|+
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 22 44579999999987 78999999999999998652 1 2334567899999999999999999999999999
Q ss_pred EEecC-C--cEEEEeeec
Q 026765 217 LWDIS-E--MLCVRTFTK 231 (233)
Q Consensus 217 iwd~~-~--~~~i~~~~~ 231 (233)
||+.. . -.+++++.+
T Consensus 288 lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 288 LWKESVDGQWVCISDVNK 305 (316)
T ss_dssp EEEECTTSCEEEEEECC-
T ss_pred EEEECCCCcEEEeeeccC
Confidence 99986 2 267776653
No 40
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-35 Score=237.10 Aligned_cols=220 Identities=13% Similarity=0.174 Sum_probs=178.5
Q ss_pred ccceee-eCccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCc-e-eeEEEecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 11 LHSREY-TGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGK-V-KDIELRGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 11 ~~~~~~-~~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~-~-~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
....++ .+|.+.|++++|+| ++++|+||+.|++|+|||+....... . ....+ +|...|.+++|+|+ +.+|++|+
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~-~~~l~s~s 130 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN-FDAFAVSS 130 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT-SSEEEEEE
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC-CCEEEEEe
Confidence 344566 88999999999999 99999999999999999986511111 1 12223 59999999999996 46889999
Q ss_pred CCCeEEEEECC---CCeeeeee--------e-----ecCCeeEEE--ECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-
Q 026765 87 GDKTVRLWDAR---SGKCSQQA--------E-----LSGENINIT--YKPDGTHIAVGNRDDELTILDVRKFKPIHRRK- 147 (233)
Q Consensus 87 ~d~~i~iwd~~---~~~~~~~~--------~-----~~~~~~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~- 147 (233)
.|+.|++||+. .++..... . ......++. +++++.++++++.|+.|++||+++.+.+....
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 99999999994 44332221 1 112334444 66889999999999999999999888776655
Q ss_pred --cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEe-eecCceeEEEEC----CCCCEEEEeeCCCcEEEEec
Q 026765 148 --FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAID----PMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~----p~~~~las~s~dg~v~iwd~ 220 (233)
+...+.+++|+|+++++++++.||.+++||.+..+++..+. .|...|.+++|+ |++++|++|+.||.|+|||+
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 35689999999999999999999999999999999888876 778899999665 46789999999999999999
Q ss_pred CCcEEEEeeecC
Q 026765 221 SEMLCVRTFTKL 232 (233)
Q Consensus 221 ~~~~~i~~~~~~ 232 (233)
.+++++++|..+
T Consensus 291 ~~~~~~~~~~~~ 302 (437)
T 3gre_A 291 VKGHCQYAFINS 302 (437)
T ss_dssp TTTEEEEEEESS
T ss_pred CCCcEEEEEEcC
Confidence 999999998754
No 41
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-33 Score=223.63 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.6
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
.+.+.+|...|++++|+|++.+++||+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+.|+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIK 143 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEE
Confidence 45788999999999999999999999999999999987532 234678999999999999985 5788999999999
Q ss_pred EEECCCCeeeeee---eecCCeeEEEECCCC----------CeEEEEcCCCcEEEEEcCCCeeeee-eecCceeeEEEEC
Q 026765 93 LWDARSGKCSQQA---ELSGENINITYKPDG----------THIAVGNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWN 158 (233)
Q Consensus 93 iwd~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~ 158 (233)
+||+......... .....+.+++|+|++ .++++++.|+.|++||.. .+.... ..+...+.+++|+
T Consensus 144 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 144 LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSIS 222 (343)
T ss_dssp EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEEC
T ss_pred EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEEC
Confidence 9999744322221 123456789999987 689999999999999954 333333 3355679999999
Q ss_pred CCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEE
Q 026765 159 MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV 226 (233)
Q Consensus 159 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i 226 (233)
|+++++++++.|+.+++||............+...|.+++|+|+++++++| .|+.|++||+.++..+
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKA 289 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCC
Confidence 999999999999999999985433222233456679999999999887755 5888999999876543
No 42
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.5e-33 Score=238.95 Aligned_cols=209 Identities=20% Similarity=0.279 Sum_probs=169.1
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe-------cCcCcEEEEEEcCCCCCEEEEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-------GHADSVDQLCWDPKHADLIATA 85 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~sg 85 (233)
..++.+|.+.|++++|+|+|++||||+.|++|++||+.... ....+. +|...|.+++|+|++ .+|++|
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~ 257 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASA 257 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEE
T ss_pred eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEECCCC-CEEEEE
Confidence 35788999999999999999999999999999999986422 112332 799999999999975 678999
Q ss_pred eCCCeEEEEECCCCeeeeeee--------------------------------------------ecCCeeEEEECCCCC
Q 026765 86 SGDKTVRLWDARSGKCSQQAE--------------------------------------------LSGENINITYKPDGT 121 (233)
Q Consensus 86 ~~d~~i~iwd~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~ 121 (233)
+.|++|++||++++++...+. +...+.+++|+|+++
T Consensus 258 s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 258 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 999999999998876544321 123456799999999
Q ss_pred eEEEEcCCCcEEEEEcCCCeeeeee-------------------------------------------------------
Q 026765 122 HIAVGNRDDELTILDVRKFKPIHRR------------------------------------------------------- 146 (233)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~~~------------------------------------------------------- 146 (233)
+|++++.|+.+++||+.+.+.....
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~ 417 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGL 417 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEE
T ss_pred EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEE
Confidence 9999999999999998654321100
Q ss_pred ----------------------------ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCcee--eeEEeeecCceeE
Q 026765 147 ----------------------------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP--LDTVVAHTAGCYC 196 (233)
Q Consensus 147 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~ 196 (233)
.+...+.+++|+|+++++++++.|+.+++|+....+. ... .+|...|++
T Consensus 418 ~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~ 496 (611)
T 1nr0_A 418 AVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITS 496 (611)
T ss_dssp EECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEE
T ss_pred EEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEE
Confidence 0112356789999999999999999999999876543 233 679999999
Q ss_pred EEECCCCCEEEEeeCCCcEEEEecCC-cEEEE
Q 026765 197 IAIDPMGRYFAVGSADSLVSLWDISE-MLCVR 227 (233)
Q Consensus 197 i~~~p~~~~las~s~dg~v~iwd~~~-~~~i~ 227 (233)
++|+|++++|++++.|++|++||+.+ +++++
T Consensus 497 v~fspdg~~las~s~d~~v~~w~~~~~~~~~~ 528 (611)
T 1nr0_A 497 VAFSNNGAFLVATDQSRKVIPYSVANNFELAH 528 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEGGGTTEESC
T ss_pred EEECCCCCEEEEEcCCCCEEEEEcCCCCceee
Confidence 99999999999999999999999987 66544
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-33 Score=236.99 Aligned_cols=198 Identities=28% Similarity=0.462 Sum_probs=170.5
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|...|++++|+|++++|++++.|++|++|+... . ....+.+|...|.+++|+|++ .+|++++.|+.|+
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~----~-~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----Q-LLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVK 451 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC----C-EEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC----C-EEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEE
Confidence 456789999999999999999999999999999999642 1 233578999999999999985 5789999999999
Q ss_pred EEECCCCeeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCC
Q 026765 93 LWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 93 iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+||.. ++....+. ....+.+++|+|++++|++++.|+.|++||.. .+.+.... +...+++++|+|+++++++++.|
T Consensus 452 ~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 452 LWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp EEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECc
Confidence 99975 44444443 34567789999999999999999999999964 44444433 45689999999999999999999
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
+.+++||. +++.+..+.+|...|++++|+|++++|++++.|++|++||
T Consensus 530 g~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 530 KTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999995 6788889999999999999999999999999999999997
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=225.23 Aligned_cols=210 Identities=20% Similarity=0.317 Sum_probs=174.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCC-CCCEEEEEeCCCe
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKT 90 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~ 90 (233)
....+.+|.+.|++++|+|++++|++|+.|++|+||++.... ......+.+|...|.+++|+|+ ++.+|++|+.|+.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 356788999999999999999999999999999999986321 2233467899999999999865 2578899999999
Q ss_pred EEEEECCCCe--eeeeee-ecCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCCeeee---eeecCceeeEEEECC---
Q 026765 91 VRLWDARSGK--CSQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPIH---RRKFGYEVNEIAWNM--- 159 (233)
Q Consensus 91 i~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~--- 159 (233)
|++||+.+++ ...... ....+.+++|+|+ +.++++++.|+.+++||++...... ...+...+.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999886 333333 3456778999999 9999999999999999998763322 223456799999999
Q ss_pred ----------CCCEEEEEeCCCeEEEEecCCce----eeeEEeeecCceeEEEECCC---CCEEEEeeCCCcEEEEecCC
Q 026765 160 ----------TGEMFFLTTGNGTVEVLTYPSLR----PLDTVVAHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 160 ----------~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~v~~i~~~p~---~~~las~s~dg~v~iwd~~~ 222 (233)
+++++++++.|+.+++||.+..+ ....+.+|...|.+++|+|+ +++|++++.||.|+|||+..
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999999999999986543 45567789999999999999 89999999999999999987
Q ss_pred c
Q 026765 223 M 223 (233)
Q Consensus 223 ~ 223 (233)
+
T Consensus 241 ~ 241 (379)
T 3jrp_A 241 E 241 (379)
T ss_dssp T
T ss_pred C
Confidence 5
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=237.52 Aligned_cols=214 Identities=15% Similarity=0.171 Sum_probs=168.2
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.+..|.++|++++|+|++++|++|+.|++|+||++.... ......+.+|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEE
Confidence 445578899999999999999999999999999997421 01223567899999999999985 578899999999999
Q ss_pred ECCCCe---eeee-eeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCee---eeeee--cCceeeEEEECCCCCEEE
Q 026765 95 DARSGK---CSQQ-AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP---IHRRK--FGYEVNEIAWNMTGEMFF 165 (233)
Q Consensus 95 d~~~~~---~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 165 (233)
|+.+++ .... ......+.+++|+|++++|++++.|+.+++||++..+. ..... +...+.+++|+|++++++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 998876 2222 23445677899999999999999999999999987653 33333 456799999999999999
Q ss_pred EEeCCCeEEEEecC------------------CceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE--
Q 026765 166 LTTGNGTVEVLTYP------------------SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC-- 225 (233)
Q Consensus 166 ~~~~~~~v~~~~~~------------------~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~-- 225 (233)
+++.|+.+++||.. ..+.+..+ +|...|.+++|+|++++|++|+.||.|+|||+.++++
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 99999999999984 24455556 8999999999999999999999999999999998876
Q ss_pred --EEeeecC
Q 026765 226 --VRTFTKL 232 (233)
Q Consensus 226 --i~~~~~~ 232 (233)
++++..+
T Consensus 242 ~~~~~~~~~ 250 (377)
T 3dwl_C 242 RALITVKLS 250 (377)
T ss_dssp EECCCEECS
T ss_pred eeeEeecCC
Confidence 6666543
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-33 Score=224.92 Aligned_cols=215 Identities=16% Similarity=0.209 Sum_probs=182.2
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.+..|.++|++++|+|++++|++|+.|+.|++|++.... ......+.+|...|.+++|+|++ .+|++++.|+.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK--WVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE--EEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc--EEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEE
Confidence 456699999999999999999999999999999987421 11334677899999999999974 688999999999999
Q ss_pred ECCCCeeeeeee---ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCee---eeee--ecCceeeEEEECCCCCEEEE
Q 026765 95 DARSGKCSQQAE---LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP---IHRR--KFGYEVNEIAWNMTGEMFFL 166 (233)
Q Consensus 95 d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~ 166 (233)
|+.+++...... ....+.+++|+|+++++++++.|+.+.+||++..+. .... .+...+.+++|+|+++++++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 998887544432 345677899999999999999999999999987652 2222 23457999999999999999
Q ss_pred EeCCCeEEEEec------------------CCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 167 TTGNGTVEVLTY------------------PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 167 ~~~~~~v~~~~~------------------~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
++.++.+++||. ...+.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++++++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 999999999994 35677778888999999999999999999999999999999999999988
Q ss_pred eecC
Q 026765 229 FTKL 232 (233)
Q Consensus 229 ~~~~ 232 (233)
+..+
T Consensus 240 ~~~~ 243 (372)
T 1k8k_C 240 LASE 243 (372)
T ss_dssp EECS
T ss_pred EccC
Confidence 8654
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=230.81 Aligned_cols=215 Identities=13% Similarity=0.268 Sum_probs=183.5
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
.|...|++++|+|++++|++|+.|+.|++|++............+.+|...|.+++|+|+++.+|++|+.|+.|++||++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 58999999999999999999999999999999753222224456788999999999999867889999999999999998
Q ss_pred CCe------eeeee----eecCCeeEEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeeeec-------CceeeEEEECC
Q 026765 98 SGK------CSQQA----ELSGENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRKF-------GYEVNEIAWNM 159 (233)
Q Consensus 98 ~~~------~~~~~----~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~~ 159 (233)
+++ ..... .....+.+++|+|+ +.++++++.|+.+++||+++.+.+..... ...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 876 22221 23345678999999 78999999999999999998887766554 46799999999
Q ss_pred CC-CEEEEEeCCC---eEEEEecCCc-eeeeEEe-eecCceeEEEECC-CCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 160 TG-EMFFLTTGNG---TVEVLTYPSL-RPLDTVV-AHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 160 ~~-~~~~~~~~~~---~v~~~~~~~~-~~~~~~~-~~~~~v~~i~~~p-~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
++ .++++++.++ .+++||.++. ++...+. +|...|.+++|+| ++++|++++.||.|++||+.++++++++..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 97 5888889898 9999999875 6777777 8999999999999 8999999999999999999999999988764
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.1e-33 Score=233.51 Aligned_cols=212 Identities=27% Similarity=0.407 Sum_probs=180.0
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
+...+.+|...|++++|+|++++|++|+.|++|++|+... . ....+.+|...|.+++|+|++ ++|++|+.|+.|
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~----~-~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v 409 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----Q-LLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTV 409 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC----C-EEEEEECCSSCEEEEEECTTS-SCEEEEETTSEE
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC----C-EEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEE
Confidence 3456789999999999999999999999999999999642 1 233577899999999999986 577899999999
Q ss_pred EEEECCCCeeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCC
Q 026765 92 RLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
++||.. ++....+. ....+.+++|+|+++++++++.|+.+++||+..........+...+.+++|+|+++++++++.|
T Consensus 410 ~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 410 KLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 999964 44444443 3456678999999999999999999999997543332333456789999999999999999999
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.+++|+. +++.+..+.+|...|++++|+|++++||+++.||.|+|||. ++++++++.++
T Consensus 489 ~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h 548 (577)
T 2ymu_A 489 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH 548 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECC
T ss_pred CEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCC
Confidence 99999995 67888899999999999999999999999999999999996 57888888765
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=227.49 Aligned_cols=212 Identities=21% Similarity=0.348 Sum_probs=177.0
Q ss_pred ceeeeCccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCc---eeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC
Q 026765 13 SREYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGK---VKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 88 (233)
...+.+|.+.|++++|+| ++++|++|+.|++|+||++....... .....+.+|...|.+++|+|++..+|++|+.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 345779999999999999 89999999999999999987542110 12346789999999999999977799999999
Q ss_pred CeEEEEECCCCeeeeee--e-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee--cC-ceeeEEEECCCCC
Q 026765 89 KTVRLWDARSGKCSQQA--E-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FG-YEVNEIAWNMTGE 162 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 162 (233)
+.|++||+++++....+ . ....+.+++|+|++++|++++.|+.+++||+++.+.+.... +. ..+..+.|+++++
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 99999999999887766 2 34567889999999999999999999999999988776652 22 2378999999999
Q ss_pred EEEEE---eCCCeEEEEecCCcee-eeEEe-eecCceeEEEECCCCCEEE-EeeCCCcEEEEecCCcE
Q 026765 163 MFFLT---TGNGTVEVLTYPSLRP-LDTVV-AHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISEML 224 (233)
Q Consensus 163 ~~~~~---~~~~~v~~~~~~~~~~-~~~~~-~~~~~v~~i~~~p~~~~la-s~s~dg~v~iwd~~~~~ 224 (233)
+++++ +.++.+++||.++.+. +.... .|...+.+++|+|++++|+ +|+.||.|++||+.+++
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 99999 7899999999987553 33333 4777899999999999986 55579999999999876
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=238.35 Aligned_cols=206 Identities=10% Similarity=0.098 Sum_probs=168.6
Q ss_pred eeeCccccEEEEEECcC------CCEEEEEeCCCCEEEEecccCCCC-------ceeeEEEecCcCcEEEEEEcCCCCCE
Q 026765 15 EYTGHKKKVHSVAWNCT------GTKLASGSVDQTARVWHIEPHGHG-------KVKDIELRGHADSVDQLCWDPKHADL 81 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~------~~~l~s~~~D~~v~vW~~~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~ 81 (233)
++.+|.+.|++++|+|+ +.+||||+.|++|+|||+...... ......+.+|...|.+++|++. ..
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~ 279 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TT 279 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--Ce
Confidence 46678999999999997 579999999999999999643211 0012357889999999999975 47
Q ss_pred EEEEeCCCeEEEEECCCCee-eeeeee-cCCeeEE--EECCCC-CeEEEEcCCCcEEEEEcCCCeeeeeee-c-C-ceee
Q 026765 82 IATASGDKTVRLWDARSGKC-SQQAEL-SGENINI--TYKPDG-THIAVGNRDDELTILDVRKFKPIHRRK-F-G-YEVN 153 (233)
Q Consensus 82 l~sg~~d~~i~iwd~~~~~~-~~~~~~-~~~~~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~-~-~~~~ 153 (233)
|++|+.||+|++||++++.. ...+.. ...+.++ +|+|++ .+|++++.|+++++||+++.+...... + . ..+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 89999999999999987643 233333 3556677 568887 899999999999999998765443322 1 1 2367
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 154 EIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+++|+|+++.+++++.|+++++||.+.+..+..+.+|...|++++|+|++++|++|+.||+|+|||+..
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 899999999999999999999999998888788899999999999999999999999999999999764
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.9e-33 Score=226.36 Aligned_cols=214 Identities=21% Similarity=0.378 Sum_probs=174.7
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC--------C-----------------------------ce
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH--------G-----------------------------KV 57 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~--------~-----------------------------~~ 57 (233)
.+.+|...|++|+|+|+|++||+|+.|++|+|||+..... . ..
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccce
Confidence 3457889999999999999999999999999999753210 0 00
Q ss_pred eeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeee----e-eeeecCCeeEEEECCCCCe-EEE--EcCC
Q 026765 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS----Q-QAELSGENINITYKPDGTH-IAV--GNRD 129 (233)
Q Consensus 58 ~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~----~-~~~~~~~~~~~~~~~~~~~-l~~--~~~d 129 (233)
....+.+|...+..+.|.|++ .++++++.|+.+++||...++.. . .......+.+++|+|.+.. +++ |+.|
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 112356888899999999875 67889999999999999876532 1 1223456678999997654 443 4578
Q ss_pred CcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEe--CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEE
Q 026765 130 DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFA 207 (233)
Q Consensus 130 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~la 207 (233)
+.|++||+++.+..........+..+.|+++++.+++++ .|+.+++||.++++++..+.+|...|++++|+|+|++|+
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 999999999999888888778899999999999998876 689999999999999999999999999999999999999
Q ss_pred EeeCCCcEEEEecCCcEEEEee
Q 026765 208 VGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 208 s~s~dg~v~iwd~~~~~~i~~~ 229 (233)
+|+.|++|+|||+.+..+.+..
T Consensus 381 S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 381 SAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp EEETTTEEEEECCSCSSCC---
T ss_pred EEecCCeEEEEECCCCCccchh
Confidence 9999999999999876655443
No 52
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-33 Score=224.69 Aligned_cols=217 Identities=14% Similarity=0.205 Sum_probs=185.8
Q ss_pred cceeeeCccccEEEEEECcC----C---CEEEEEeCCCCEEEEecccCCCC-ceeeEEEecC-----cCcEEEEEEc---
Q 026765 12 HSREYTGHKKKVHSVAWNCT----G---TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGH-----ADSVDQLCWD--- 75 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~----~---~~l~s~~~D~~v~vW~~~~~~~~-~~~~~~~~~h-----~~~v~~~~~~--- 75 (233)
....+.+|...|++++|+|+ + ++|++++.|+.|++|++...... ......+.+| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 35677899999999999999 9 99999999999999999764321 1113456778 5899999999
Q ss_pred -CCCCCE-EEEEeCCCeEEEEECCC------Ceeee-----eee--------ecCCeeEEEECCCCCeEEEEcCCCcEEE
Q 026765 76 -PKHADL-IATASGDKTVRLWDARS------GKCSQ-----QAE--------LSGENINITYKPDGTHIAVGNRDDELTI 134 (233)
Q Consensus 76 -~~~~~~-l~sg~~d~~i~iwd~~~------~~~~~-----~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~i 134 (233)
|++ .+ |++|+.|+.|++||++. ++... .+. ....+.+++|+|++ .+++++.|+.+.+
T Consensus 134 ~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 134 DRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI 211 (397)
T ss_dssp -----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE
T ss_pred CCCC-ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE
Confidence 875 56 88999999999999987 54443 332 24556789999999 9999999999999
Q ss_pred EEcCCCeeeeeeec-------CceeeEEEECCCCCEEEEEeCC---CeEEEEecCCceeeeEEee-------------ec
Q 026765 135 LDVRKFKPIHRRKF-------GYEVNEIAWNMTGEMFFLTTGN---GTVEVLTYPSLRPLDTVVA-------------HT 191 (233)
Q Consensus 135 ~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-------------~~ 191 (233)
||+++.+.+..... ...+.+++|+|+++++++++.+ +.+++||.++.+.+..+.+ |.
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 99998888776664 6789999999999999999999 9999999999999989988 99
Q ss_pred CceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 192 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 192 ~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..|.+++|+|++++|++++.||.|+|||+.++++++++.
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999999999999999999999999999999999999987
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-32 Score=212.58 Aligned_cols=208 Identities=18% Similarity=0.280 Sum_probs=183.5
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
+|...|++++|+|++++|++++.|+.|++|++.... ......+.+|...|.+++|+|++ .++++++.|+.|++||++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT--PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC--cceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCC
Confidence 799999999999999999999999999999987532 22344677899999999999974 678899999999999999
Q ss_pred CCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEE
Q 026765 98 SGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVL 176 (233)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 176 (233)
+++....+.. ...+.+++|+|+++++++++.|+.+.+||+++.+.+........+.+++|+|+++++++++.++.+++|
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 9887766653 456778999999999999999999999999998888777777889999999999999999999999999
Q ss_pred ecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 177 TYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
+.++.+. ..+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 252 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 252 HVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe
Confidence 9987665 356789999999999999999999999999999999998877554
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-32 Score=215.80 Aligned_cols=212 Identities=21% Similarity=0.328 Sum_probs=173.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC-----------------------------C-------
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH-----------------------------G------- 55 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~-----------------------------~------- 55 (233)
..+++.+|...|++++|+|++++|++|+.|+.|++|+...... .
T Consensus 78 ~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 78 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 3467889999999999999999999999999999998642110 0
Q ss_pred ---ceeeEEEecCcCcEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCC
Q 026765 56 ---KVKDIELRGHADSVDQLCWDPKHA-DLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDD 130 (233)
Q Consensus 56 ---~~~~~~~~~h~~~v~~~~~~~~~~-~~l~sg~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~ 130 (233)
........+|...+..++|++++. .++++++.|+.|++||++++++...+.. ...+.+++|+|++++|++++.|+
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 000112346888999999987654 4678999999999999999887766654 35677899999999999999999
Q ss_pred cEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEE---------eeecCceeEEEECC
Q 026765 131 ELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV---------VAHTAGCYCIAIDP 201 (233)
Q Consensus 131 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~v~~i~~~p 201 (233)
.+++||+++.+.+........+..+.|+|++. +++++.|+.+++||.+....+..+ .+|...|++++|+|
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 316 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 316 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT
T ss_pred eEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC
Confidence 99999999998888877777899999999875 455667999999999877655444 35788999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCcE
Q 026765 202 MGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 202 ~~~~las~s~dg~v~iwd~~~~~ 224 (233)
++++|++|+.||.|+|||+++|.
T Consensus 317 dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 317 DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999885
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=214.97 Aligned_cols=209 Identities=20% Similarity=0.373 Sum_probs=171.8
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC-------------------------------------Cce
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH-------------------------------------GKV 57 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~-------------------------------------~~~ 57 (233)
.+.+|...|++++|+|++++|+||+.|++|++|+++.... ...
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCce
Confidence 3457899999999999999999999999999999753210 001
Q ss_pred eeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeee-----eeeecCCeeEEEECCCCCeE---EEEcCC
Q 026765 58 KDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ-----QAELSGENINITYKPDGTHI---AVGNRD 129 (233)
Q Consensus 58 ~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l---~~~~~d 129 (233)
....+.+|...+..+.+.+.+ .++++++.|+.|++||+++++... .....+.+..+.+.|++..+ ++++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 112356788899999999875 678899999999999998765322 12233456778888876644 356778
Q ss_pred CcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEe--CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEE
Q 026765 130 DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFA 207 (233)
Q Consensus 130 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~la 207 (233)
+.+++||.+.............+..+.|++.++.+++++ .|+.+++||.++++++..+.+|.+.|++++|+|++++||
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA 300 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 999999998888777777777899999999999988765 689999999999999999999999999999999999999
Q ss_pred EeeCCCcEEEEecCCcE
Q 026765 208 VGSADSLVSLWDISEML 224 (233)
Q Consensus 208 s~s~dg~v~iwd~~~~~ 224 (233)
+||.||+|+|||+.+..
T Consensus 301 S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 301 SAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTEEEEECCSCCC
T ss_pred EEecCCeEEEEECCCCC
Confidence 99999999999998764
No 56
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=220.95 Aligned_cols=216 Identities=17% Similarity=0.238 Sum_probs=180.2
Q ss_pred ceeeeCccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCceeeEE---------EecCcCcEEEEEEcCCCCCEE
Q 026765 13 SREYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIE---------LRGHADSVDQLCWDPKHADLI 82 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~---------~~~h~~~v~~~~~~~~~~~~l 82 (233)
.+.+.+|.+.|++++|+| ++++|++|+.|++|++|++............ ..+|...|.+++|+|+++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 356778999999999999 9999999999999999999754322211100 025999999999999777789
Q ss_pred EEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECCC---CCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEEC
Q 026765 83 ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD---GTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWN 158 (233)
Q Consensus 83 ~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~ 158 (233)
++++.|+.|++||+.+++.............+.+.|. +.++++++.++.+.+||+++.+.+.... +...+.+++|+
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred EEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 9999999999999999988887777777888899884 4589999999999999999877666554 45679999999
Q ss_pred CCCCE-EEEEeCCCeEEEEecCCce-eeeEE---------------eeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 159 MTGEM-FFLTTGNGTVEVLTYPSLR-PLDTV---------------VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 159 ~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~---------------~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
|+++. +++++.||.+++||.+... ++..+ ..|...|.+++|+|++++|++++.||.|++||+.
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 99994 8899999999999997654 33333 5688899999999999999999999999999999
Q ss_pred CcEEEEe
Q 026765 222 EMLCVRT 228 (233)
Q Consensus 222 ~~~~i~~ 228 (233)
+++.+..
T Consensus 276 ~~~~~~~ 282 (408)
T 4a11_B 276 NGENTLV 282 (408)
T ss_dssp TCCBCCC
T ss_pred CCcccee
Confidence 8776543
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-32 Score=212.59 Aligned_cols=203 Identities=20% Similarity=0.289 Sum_probs=179.7
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|...|++++|+|++++|++++.|+.|++||+... .....+.+|...|.+++|+|++ .+|++++.|+.|+
T Consensus 134 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~ 208 (337)
T 1gxr_A 134 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVR 208 (337)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred eeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----ceeeeeecccCceEEEEECCCC-CEEEEEecCCcEE
Confidence 4567789999999999999999999999999999998642 1334577899999999999975 6788999999999
Q ss_pred EEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCe
Q 026765 93 LWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGT 172 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (233)
+||+++++..........+.+++|+|+++++++++.++.+.+||+++.+......+...+..+.|+|+++++++++.+|.
T Consensus 209 ~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 99999998887777777888999999999999999999999999988776655556678999999999999999999999
Q ss_pred EEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 173 VEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 173 v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
+++|+.++.+.+.. ..|...|.+++|+|++++|++++.||.|++||+.
T Consensus 289 i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 289 LNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999988877643 4588899999999999999999999999999973
No 58
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.6e-33 Score=220.93 Aligned_cols=199 Identities=16% Similarity=0.196 Sum_probs=156.6
Q ss_pred CccccEEEEEECcCCCEEEE--EeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q 026765 18 GHKKKVHSVAWNCTGTKLAS--GSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s--~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd 95 (233)
.+...+.+++|+|||+++++ ++.|++|||||+.... ...++ .|...|.+++|+|++ +++++++. +.+++|+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~----~~~~~-~~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~ 203 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT----EKFEI-ETRGEVKDLHFSTDG-KVVAYITG-SSLEVIS 203 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE----EEEEE-ECSSCCCEEEECTTS-SEEEEECS-SCEEEEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc----EEEEe-CCCCceEEEEEccCC-ceEEeccc-eeEEEEE
Confidence 34556899999999999765 4579999999986421 22234 477889999999985 57778775 5566777
Q ss_pred CCCCeeeeeeee---cCCeeEEEECCCCCeEEEEcCCC----cEEEEEcCCCeeeee-----eecCceeeEEEECCCCCE
Q 026765 96 ARSGKCSQQAEL---SGENINITYKPDGTHIAVGNRDD----ELTILDVRKFKPIHR-----RKFGYEVNEIAWNMTGEM 163 (233)
Q Consensus 96 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 163 (233)
..+++....... ...+.+++|+|++.++++++.|+ .+..|++........ ..+...+.+++|+|+|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 204 TVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL 283 (365)
T ss_dssp TTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE
T ss_pred eccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc
Confidence 666665433222 22356799999999999998876 578888866543211 123456999999999999
Q ss_pred EEEEeCCCeEEEEecCCceeeeEE-eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 164 FFLTTGNGTVEVLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
+++++.|+.|++||.++++++..+ .+|...|++++|+|+|++||+||.|++|+|||+.+.
T Consensus 284 lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999998886 689999999999999999999999999999999643
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=227.65 Aligned_cols=213 Identities=14% Similarity=0.234 Sum_probs=170.9
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC-------CceeeEEEecCc------------CcEEEEEEcCCC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH-------GKVKDIELRGHA------------DSVDQLCWDPKH 78 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~-------~~~~~~~~~~h~------------~~v~~~~~~~~~ 78 (233)
.|.+.|++++|+|+|++||+|+.||.|+||++..... .......+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4789999999999999999999999999999874321 111234678898 889999999985
Q ss_pred C-CEEEEEeCCCeEEEEECCCCeeee---------------------------------------e--eeecCCeeEEEE
Q 026765 79 A-DLIATASGDKTVRLWDARSGKCSQ---------------------------------------Q--AELSGENINITY 116 (233)
Q Consensus 79 ~-~~l~sg~~d~~i~iwd~~~~~~~~---------------------------------------~--~~~~~~~~~~~~ 116 (233)
. ..|++++.|+.|++||+.++.... . ......+.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3 578899999999999987644310 1 113345678999
Q ss_pred CCCCCeEEEEcCCCcEEEEEcCCC-eeeeee--------ecCceeeEEEECCCC-CEEEEEeCCCeEEEEecCCcee---
Q 026765 117 KPDGTHIAVGNRDDELTILDVRKF-KPIHRR--------KFGYEVNEIAWNMTG-EMFFLTTGNGTVEVLTYPSLRP--- 183 (233)
Q Consensus 117 ~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~--- 183 (233)
+|++++++++ .|+.|++||++.. +..... .+...+.+++|+|++ +++++++.||.+++||.++.+.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999843 333211 234569999999998 9999999999999999988776
Q ss_pred -eeEEeeecC------------ceeEEEECCCCCEEEEeeCCCcEEEEecCC-cEEEEeeecC
Q 026765 184 -LDTVVAHTA------------GCYCIAIDPMGRYFAVGSADSLVSLWDISE-MLCVRTFTKL 232 (233)
Q Consensus 184 -~~~~~~~~~------------~v~~i~~~p~~~~las~s~dg~v~iwd~~~-~~~i~~~~~~ 232 (233)
...+..|.. .|.+++|+|++++|++++. +.|+|||+.. +.++++|..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecc
Confidence 677777776 8999999999999999999 9999999986 8888877654
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=229.13 Aligned_cols=215 Identities=18% Similarity=0.329 Sum_probs=183.4
Q ss_pred cceeeeCccccEEEEEECcC-CCEEEEEeCCCCEEEEecccCCC-----CceeeEEEecCcCcEEEEEEcCCCCCEEEEE
Q 026765 12 HSREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGH-----GKVKDIELRGHADSVDQLCWDPKHADLIATA 85 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~-~~~l~s~~~D~~v~vW~~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 85 (233)
....+.+|.+.|++++|+|+ +++|++++.|++|++||+..... .......+.+|...|.+++|+|+++.+|+++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 45677899999999999998 89999999999999999975431 1111112457999999999999877899999
Q ss_pred eCCCeEEEEECCCCeeeeeeee-------cCCeeEEEECCCC-CeEEEEcCCC---cEEEEEcCCC-eeeeeee--cCce
Q 026765 86 SGDKTVRLWDARSGKCSQQAEL-------SGENINITYKPDG-THIAVGNRDD---ELTILDVRKF-KPIHRRK--FGYE 151 (233)
Q Consensus 86 ~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~-~~~~~~~--~~~~ 151 (233)
+.|+.|++||+++++....+.. ...+.+++|+|++ .++++++.|+ .|++||+++. .+..... +...
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 9999999999999887776655 3456789999997 6889999998 9999999875 4444443 5567
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCC-CEEEEeeCCCcEEEEecCCcEEE
Q 026765 152 VNEIAWNM-TGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCV 226 (233)
Q Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~las~s~dg~v~iwd~~~~~~i 226 (233)
+.+++|+| +++++++++.|+.+++|+.++.+.+..+..|...|.+++|+|++ .+|++++.||.|+|||+.+....
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99999999 99999999999999999999999999999999999999999999 89999999999999999877543
No 61
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-33 Score=245.05 Aligned_cols=206 Identities=12% Similarity=0.105 Sum_probs=175.6
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
...+|.+.|++++|+|++++||+|+.|++|+||+.... .......|...|.+++|+| + .+|++++.|++|++|
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~-----~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV-----EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC-----EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc-----EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 34589999999999999999999999999999997531 1222345888999999999 4 488999999999999
Q ss_pred ECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeee------------eecCceeeEEEECCC-C
Q 026765 95 DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR------------RKFGYEVNEIAWNMT-G 161 (233)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------------~~~~~~~~~~~~~~~-~ 161 (233)
|++++++...+.....+.+++|+|+++++++|+.|+.|++||+++.+.... ..+...+.+++|+|+ +
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 999998877777667788999999999999999999999999987764311 113347899999996 4
Q ss_pred CEEEEEeCCCeEEEEecCCceeeeEEeee------------------cCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVAH------------------TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 162 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
..+++++.++.+ +||.++.+.+..+..| ...|++++|+|+|++||+|+.||+|+|||++++
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 788999999999 9999998888877765 467999999999999999999999999999998
Q ss_pred EEEEe
Q 026765 224 LCVRT 228 (233)
Q Consensus 224 ~~i~~ 228 (233)
++++.
T Consensus 244 ~~~~~ 248 (902)
T 2oaj_A 244 HMIMA 248 (902)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 88753
No 62
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.7e-33 Score=219.13 Aligned_cols=211 Identities=13% Similarity=0.190 Sum_probs=180.6
Q ss_pred ceeeeCccccEEEEEECcCCC-EEEEEeCCCCEEEEec-ccCCCCceeeEEEec--CcCcEEEEEEcCCCCCEEEEEeCC
Q 026765 13 SREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHI-EPHGHGKVKDIELRG--HADSVDQLCWDPKHADLIATASGD 88 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~-~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~sg~~d 88 (233)
.+.+.+|...|++++|+|+++ +|++|+.|+.|++|++ .... ...+.+ |...|.+++|+| +.++++++.|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-----~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d 121 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS-----FQALTNNEANLGICRICKYG--DDKLIAASWD 121 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS-----EEECBSCCCCSCEEEEEEET--TTEEEEEETT
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc-----eEeccccCCCCceEEEEeCC--CCEEEEEcCC
Confidence 345568999999999999999 9999999999999998 6432 245678 999999999999 5688999999
Q ss_pred CeEEEEECCC---------CeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCC-Ceee---eeeecCceeeEE
Q 026765 89 KTVRLWDARS---------GKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPI---HRRKFGYEVNEI 155 (233)
Q Consensus 89 ~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~---~~~~~~~~~~~~ 155 (233)
+.|++||+++ +++...+.....+.+++|+|++ +++++.++.+.+||+++ .... ....+...+.++
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV 199 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEE
T ss_pred CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEE
Confidence 9999999987 6655555566677889999887 89999999999999987 4322 222345679999
Q ss_pred EECC-CCCEEEEEeCCCeEEEEecCCc------eeeeEEeeecC---------ceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 156 AWNM-TGEMFFLTTGNGTVEVLTYPSL------RPLDTVVAHTA---------GCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 156 ~~~~-~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~---------~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
+|+| +++++++++.+|.+++|+++.. +....+..|.. .|.+++|+|++++|++|+.||.|++||
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 9999 9999999999999999999776 67777888865 899999999999999999999999999
Q ss_pred cCCcEEEEeeecC
Q 026765 220 ISEMLCVRTFTKL 232 (233)
Q Consensus 220 ~~~~~~i~~~~~~ 232 (233)
+.++++++++..+
T Consensus 280 ~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 280 LQTRKKIKNFAKF 292 (342)
T ss_dssp TTTTEEEEECCCC
T ss_pred CccHhHhhhhhcc
Confidence 9999999998764
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.7e-32 Score=218.99 Aligned_cols=210 Identities=15% Similarity=0.176 Sum_probs=177.9
Q ss_pred ceeeeCc-----cccEEEEEEC----cCCCE-EEEEeCCCCEEEEeccc------CCCCce-eeEEE-------ecCcCc
Q 026765 13 SREYTGH-----KKKVHSVAWN----CTGTK-LASGSVDQTARVWHIEP------HGHGKV-KDIEL-------RGHADS 68 (233)
Q Consensus 13 ~~~~~~H-----~~~V~~~~~~----~~~~~-l~s~~~D~~v~vW~~~~------~~~~~~-~~~~~-------~~h~~~ 68 (233)
...+.+| ...|++++|+ |++++ |++++.|+.|++||+.. ...... ....+ ..|...
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 4567788 6999999999 99999 99999999999999975 222110 11134 448899
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeee-------cCCeeEEEECCCCCeEEEEcCC---CcEEEEEcC
Q 026765 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-------SGENINITYKPDGTHIAVGNRD---DELTILDVR 138 (233)
Q Consensus 69 v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~ 138 (233)
|.+++|+|++ ++++|+.|+.|++||+++++....+.. ...+.+++|+|++++|++++.| +.|.+||++
T Consensus 189 i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 189 ATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp CCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 9999999986 889999999999999999888777765 5667889999999999999999 999999999
Q ss_pred CCeeeeeee--------------cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEe------ee--------
Q 026765 139 KFKPIHRRK--------------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV------AH-------- 190 (233)
Q Consensus 139 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~-------- 190 (233)
+.+.+.... +...+.+++|+|+++++++++.|+.+++|+..+.+.+..+. +|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 267 FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBC
T ss_pred CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccc
Confidence 887766554 45679999999999999999999999999999999999998 78
Q ss_pred -------cCceeEEEECCCC----------CEEEEeeCCCcEEEEecCCcE
Q 026765 191 -------TAGCYCIAIDPMG----------RYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 191 -------~~~v~~i~~~p~~----------~~las~s~dg~v~iwd~~~~~ 224 (233)
...|.+++|+|++ ++|++|+.||.|+|||+++++
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8999999999998 799999999999999998763
No 64
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-32 Score=236.81 Aligned_cols=207 Identities=22% Similarity=0.345 Sum_probs=170.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeE--EEecCcCcEEEEEEcCCCC-CEEEEEeCC
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI--ELRGHADSVDQLCWDPKHA-DLIATASGD 88 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~~l~sg~~d 88 (233)
..+.+.+|.+.|++++|+|++++|+||+.|++|++||.... ..... ...+|...|.+++|+|++. ..+++|+.|
T Consensus 464 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 464 STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE---CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC---EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC---cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 34678899999999999999999999999999999997431 11111 1246889999999999753 578999999
Q ss_pred CeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE
Q 026765 89 KTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (233)
+.|++||++++++...+..+ +.+.+++|+|+++++++++.|+.|++||+++.+.+........+.+++|+|++.+++++
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 99999999988877666543 56778999999999999999999999999998888777667789999999998877766
Q ss_pred eCCCeEEEEecCCceeeeEEeeec-------------------CceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 168 TGNGTVEVLTYPSLRPLDTVVAHT-------------------AGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 168 ~~~~~v~~~~~~~~~~~~~~~~~~-------------------~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
. ++.+++||.++.+.+..+..+. ..+.+++|+|+|++|++|+.||.|+|||+..
T Consensus 621 ~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 621 T-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp E-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred c-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 5 5569999999887776654321 1367899999999999999999999999863
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-32 Score=213.22 Aligned_cols=216 Identities=17% Similarity=0.290 Sum_probs=179.8
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC---------------------------------Ccee
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH---------------------------------GKVK 58 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~---------------------------------~~~~ 58 (233)
....+.+|.+.|++++|+|++++|++++.|++|++||+..... +.+.
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~ 145 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSIN 145 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEE
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEE
Confidence 3467889999999999999999999999999999999754210 0000
Q ss_pred eE--------------------EEecCcC--cEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-Ceeeeeeee-cCCeeEE
Q 026765 59 DI--------------------ELRGHAD--SVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAEL-SGENINI 114 (233)
Q Consensus 59 ~~--------------------~~~~h~~--~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~-~~~~~~~~~-~~~~~~~ 114 (233)
.. .+..|.. .+.+++|+|++ .+|++|+.|+.|++||+++ .+....+.. ...+.++
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 00 1112222 78888888864 5778899999999999988 565555543 4567789
Q ss_pred EECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCC--------------eEEEEecCC
Q 026765 115 TYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNG--------------TVEVLTYPS 180 (233)
Q Consensus 115 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~v~~~~~~~ 180 (233)
+|+|++.+|++++.|+.+.+||+++.+..........+..+.|+|+++++++++.++ .+++|+..+
T Consensus 225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred EECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 999999999999999999999999988888777778899999999999999999888 899999999
Q ss_pred ceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 181 LRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 181 ~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
.+.+..+.+|...|.+++|+|++++|++|+.||.|+|||++.+.....
T Consensus 305 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 305 EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCC
T ss_pred CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhH
Confidence 999999999999999999999999999999999999999987654433
No 66
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-32 Score=215.20 Aligned_cols=209 Identities=20% Similarity=0.258 Sum_probs=170.1
Q ss_pred ceeeeCccccEEEEEECcC--CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCC
Q 026765 13 SREYTGHKKKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~--~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~ 89 (233)
...+.+|.+.|++++|+|+ +++|++|+.|++|++||+.... ......+.+|...|.+++|+|+. +.+|++++.|+
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 3567899999999999987 9999999999999999987522 12334567899999999999973 46889999999
Q ss_pred eEEEEECCCCeeeee--e-eecCCeeEEEECC-------------CCCeEEEEcCCCcEEEEEcCCCeee----eeee-c
Q 026765 90 TVRLWDARSGKCSQQ--A-ELSGENINITYKP-------------DGTHIAVGNRDDELTILDVRKFKPI----HRRK-F 148 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~--~-~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~-~ 148 (233)
.|++||++.+..... . .....+.+++|+| ++.++++++.|+.|++||++..... .... +
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 999999988743222 2 2345667899999 6999999999999999999765422 2222 3
Q ss_pred CceeeEEEECCC---CCEEEEEeCCCeEEEEecCCce-----eeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEec
Q 026765 149 GYEVNEIAWNMT---GEMFFLTTGNGTVEVLTYPSLR-----PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 149 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~ 220 (233)
...+.+++|+|+ ++++++++.||.+++|+.+..+ .......|...|.+++|+|++++|++++.||.|+|||+
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 567999999999 8999999999999999998753 22223348889999999999999999999999999999
Q ss_pred CCc
Q 026765 221 SEM 223 (233)
Q Consensus 221 ~~~ 223 (233)
...
T Consensus 286 ~~~ 288 (379)
T 3jrp_A 286 NLE 288 (379)
T ss_dssp EET
T ss_pred CCC
Confidence 854
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.3e-33 Score=223.40 Aligned_cols=204 Identities=18% Similarity=0.269 Sum_probs=170.2
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|.+.|++++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+.|+
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS----NPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIR 206 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----CCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEE
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc----CceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEE
Confidence 34567999999999999999999999999999999997532 223577999999999999975 6788999999999
Q ss_pred EEECCCCeeeeeeeec-------------------------CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee
Q 026765 93 LWDARSGKCSQQAELS-------------------------GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK 147 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 147 (233)
+||+++++....+... ..+.+++|+|+++++++++.|+.+++||+++.+......
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 9999998877665431 222335668999999999999999999999887665554
Q ss_pred --cCceeeEEEECCCCC-EEEEEeCCCeEEEEecCCce-eeeEEee-ecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 148 --FGYEVNEIAWNMTGE-MFFLTTGNGTVEVLTYPSLR-PLDTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 148 --~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~~~-~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+...+.+++|+|+++ ++++++.||.+++||.++.+ ++..+.. |...|.++.+ |++++|++++.|+.|++||+..
T Consensus 287 ~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 287 SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 345799999999999 99999999999999998764 4677777 5667777755 5788999999999999999876
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.9e-32 Score=220.88 Aligned_cols=212 Identities=20% Similarity=0.278 Sum_probs=175.5
Q ss_pred ceeeeCccccE-EEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKV-HSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V-~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..++.+|.+.| +++.| ++++|+||+.|++|++||+... .....+.+|...|.+++|+|++ ++++|+.|+.|
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i 185 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK----KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTV 185 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC----cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCE
Confidence 45788998885 66666 5789999999999999998642 2344678999999999999864 88999999999
Q ss_pred EEEECCCCeeeeeeee-cCCeeEEEEC--CCCCeEEEEcCCCcEEEEEcCCCeeeee----------------------e
Q 026765 92 RLWDARSGKCSQQAEL-SGENINITYK--PDGTHIAVGNRDDELTILDVRKFKPIHR----------------------R 146 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~----------------------~ 146 (233)
++||++++++...+.. ...+.+++++ +++.++++++.|+.+++||+++...... .
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 9999999988777663 3556677776 6788999999999999999986543211 1
Q ss_pred ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEE
Q 026765 147 KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV 226 (233)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i 226 (233)
..++......++++++++++++.|+.+++||..+.+.+..+.+|...|.+++|+|++++|++|+.||.|++||+.+++++
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 11122223344678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecC
Q 026765 227 RTFTKL 232 (233)
Q Consensus 227 ~~~~~~ 232 (233)
+++..+
T Consensus 346 ~~~~~h 351 (464)
T 3v7d_B 346 YTLQGH 351 (464)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 998765
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-31 Score=216.60 Aligned_cols=213 Identities=20% Similarity=0.343 Sum_probs=174.4
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+.+.+|.+.|++++| +++.|++|+.|+.|++||+.... .....+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 168 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v 241 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN---HQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVV 241 (401)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS---CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc---ceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Confidence 34677899999999999 56899999999999999987422 2334678899999999999964 688999999999
Q ss_pred EEEECCCCeeeeeee-ecCCeeEEEECCCCCeE-EEEc--CCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE
Q 026765 92 RLWDARSGKCSQQAE-LSGENINITYKPDGTHI-AVGN--RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l-~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (233)
++||+++++....+. ....+.+++|+|++..+ ++++ .|+.+++||+++.+.+........+.+++|+++++.++++
T Consensus 242 ~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred EEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEE
Confidence 999999887766654 34566789999977554 5544 6999999999998888887777889999999999999995
Q ss_pred e--CCCeEEEEecCCceee--eEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 168 T--GNGTVEVLTYPSLRPL--DTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 168 ~--~~~~v~~~~~~~~~~~--~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+ .+|.+++|+..+.+.. ..+.+|...|.+++|+|++++|++++.||.|++||+.++++++...
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred eecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 4 7999999999885443 4467899999999999999999999999999999999998876643
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.8e-33 Score=221.13 Aligned_cols=201 Identities=15% Similarity=0.259 Sum_probs=170.4
Q ss_pred ccccEEEEEECcC----CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 19 HKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 19 H~~~V~~~~~~~~----~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
|.+.|++++|+|+ +.+|++|+.|+.|++||+.... ....+.+|...|.+++|+|.++.+|++|+.|+.|++|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ----CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLW 143 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC----EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce----EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 6788999999999 6799999999999999986422 2345778999999999999556889999999999999
Q ss_pred ECCCCeeeeee----eecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-----------------------
Q 026765 95 DARSGKCSQQA----ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK----------------------- 147 (233)
Q Consensus 95 d~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------- 147 (233)
|+++++....+ .....+.+++|+|+++++++++.|+.+++||+++.+......
T Consensus 144 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred EeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 99998877665 244667889999999999999999999999998654332211
Q ss_pred ------cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCce--------------eeeEEeeecCceeEEEECCC--CCE
Q 026765 148 ------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR--------------PLDTVVAHTAGCYCIAIDPM--GRY 205 (233)
Q Consensus 148 ------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------~~~~~~~~~~~v~~i~~~p~--~~~ 205 (233)
+...+.++.|+ ++++++++.++.+++|+..+.+ .+..+..|...|.+++|+|+ +++
T Consensus 224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 44568889998 7899999999999999987653 36777889999999999999 999
Q ss_pred EEEeeCCCcEEEEecCCcEE
Q 026765 206 FAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 206 las~s~dg~v~iwd~~~~~~ 225 (233)
|++|+.||.|++||+..+++
T Consensus 302 l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp EEEECTTSCEEEEECCSSSG
T ss_pred EEEEecCCcEEEEECCCCCC
Confidence 99999999999999998753
No 71
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-33 Score=222.69 Aligned_cols=207 Identities=18% Similarity=0.255 Sum_probs=163.2
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.... .......+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 124 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-TWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVI 124 (377)
T ss_dssp ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCE
T ss_pred EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-ceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeE
Confidence 345678999999999999999999999999999999987533 112234567899999999999975 567899999999
Q ss_pred EEEECCCCee---eeeee--ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCC------------------Ceeeeeeec
Q 026765 92 RLWDARSGKC---SQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVRK------------------FKPIHRRKF 148 (233)
Q Consensus 92 ~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~------------------~~~~~~~~~ 148 (233)
++||++.++. ...+. ....+.+++|+|+++++++++.|+.+++||++. .+.+....+
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS 204 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccC
Confidence 9999988762 34443 345678899999999999999999999999852 222222334
Q ss_pred CceeeEEEECCCCCEEEEEeCCCeEEEEecCCcee----eeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 149 GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
...+.+++|+|+++++++++.|+.+++||..+.+. +..+.+|...|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 45699999999999999999999999999988776 78888999999999999999999999877766 66654
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.6e-32 Score=214.40 Aligned_cols=211 Identities=13% Similarity=0.237 Sum_probs=171.0
Q ss_pred cceeeeCccccEEEEE------ECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC----cEEEEE----EcCC
Q 026765 12 HSREYTGHKKKVHSVA------WNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD----SVDQLC----WDPK 77 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~------~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~----~v~~~~----~~~~ 77 (233)
....+.+|.+.|++++ |+|++++|++|+.|++|++||+..... . ...+..|.. .+.+++ |+|+
T Consensus 103 ~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-~--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 103 PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-P--VANMEPVQGENKRDCWTVAFGNAYNQE 179 (357)
T ss_dssp CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-C--SEEECCCTTSCCCCEEEEEEECCCC-C
T ss_pred cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-c--ceeccccCCCCCCceEEEEEEeccCCC
Confidence 4567889999999995 578999999999999999999875321 1 123444433 788888 6666
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECC---CCCeEEEEcCCCcEEEEEcCCCeeeeee------ec
Q 026765 78 HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP---DGTHIAVGNRDDELTILDVRKFKPIHRR------KF 148 (233)
Q Consensus 78 ~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~------~~ 148 (233)
+.++++|+.|+.|++||+++++..........+.+++|+| ++.++++++.|+.+.+||+++.+..... .+
T Consensus 180 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 180 -ERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC
T ss_pred -CCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC
Confidence 4688999999999999999998766666677788999999 9999999999999999999876544332 34
Q ss_pred CceeeEEEECCCCC-EEEEEeCCCeEEEEecCCc-------------------eeeeEEeeecCceeEEEECCCCCEEE-
Q 026765 149 GYEVNEIAWNMTGE-MFFLTTGNGTVEVLTYPSL-------------------RPLDTVVAHTAGCYCIAIDPMGRYFA- 207 (233)
Q Consensus 149 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~-------------------~~~~~~~~~~~~v~~i~~~p~~~~la- 207 (233)
...+.+++|+|+++ ++++++.||.+++|+.+.. +.+..+.+|...|.+++|+|++++|+
T Consensus 259 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 259 KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 56799999999998 7999999999999998643 45667888999999999999999998
Q ss_pred EeeCCCcEEEEecCCcEEE
Q 026765 208 VGSADSLVSLWDISEMLCV 226 (233)
Q Consensus 208 s~s~dg~v~iwd~~~~~~i 226 (233)
+|+.||.|+|||+.+.+.|
T Consensus 339 s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 339 CSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp EEETTSEEEEEEECC----
T ss_pred EecCCCcEEEEECCCcccC
Confidence 8999999999999887543
No 73
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-32 Score=220.96 Aligned_cols=210 Identities=14% Similarity=0.236 Sum_probs=173.2
Q ss_pred eeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd 95 (233)
+..| ..+....|+|++++|++|+.|+.|++||+... .....+.+|...|.+++|+|++ .+|++|+.|+.|++||
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN----LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWS 167 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC----EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc----ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEe
Confidence 3444 45566688999999999999999999998632 1223456899999999999975 5889999999999999
Q ss_pred CCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec-------------------------C
Q 026765 96 ARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-------------------------G 149 (233)
Q Consensus 96 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------------------~ 149 (233)
+++++....+.. ...+.+++|+|+++++++++.|+.+++||+++.+.+..... .
T Consensus 168 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 247 (420)
T 3vl1_A 168 VKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEIST 247 (420)
T ss_dssp TTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCC
T ss_pred CCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeeccc
Confidence 998887776653 45677899999999999999999999999998877665542 1
Q ss_pred ceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEe-eecCceeEEEECCCCC-EEEEeeCCCcEEEEecCCcEE-E
Q 026765 150 YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEMLC-V 226 (233)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~~~~-i 226 (233)
..+..++|+|+++++++++.+|.+++||.++.+....+. .|...|.+++|+|+++ +|++|+.||.|++||+.++.+ +
T Consensus 248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~ 327 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV 327 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch
Confidence 234456678999999999999999999999887776665 4788999999999999 999999999999999988643 5
Q ss_pred Eeeec
Q 026765 227 RTFTK 231 (233)
Q Consensus 227 ~~~~~ 231 (233)
.++..
T Consensus 328 ~~~~~ 332 (420)
T 3vl1_A 328 GEFLI 332 (420)
T ss_dssp EEEEE
T ss_pred hhhhc
Confidence 55543
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-31 Score=233.35 Aligned_cols=216 Identities=16% Similarity=0.211 Sum_probs=186.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+.+.+|.+.|++++|+|++++|++|+.||+|+|||+... .....+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i 79 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ----VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRI 79 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC----ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeE
Confidence 34688999999999999999999999999999999998642 1334677899999999999985 678899999999
Q ss_pred EEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCC-eeeeeee-cCceeeEEEECC-CCCEEEEE
Q 026765 92 RLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKF-KPIHRRK-FGYEVNEIAWNM-TGEMFFLT 167 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ 167 (233)
++||+.+++....+.. ...+.+++|+|++.++++++.|+.+.+||+.+. ....... +...+.+++|+| +++.++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 9999999988776663 456778999999999999999999999999875 3333332 456799999999 88999999
Q ss_pred eCCCeEEEEecCCceeeeEEeeec-CceeEEEECC--CCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 168 TGNGTVEVLTYPSLRPLDTVVAHT-AGCYCIAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 168 ~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~i~~~p--~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.||.+++|+....+....+..+. ..+.+++|+| ++++|++|+.||.|++||+.++.+++++..+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 227 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 999999999998877777776655 8899999999 9999999999999999999999999888754
No 75
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=234.87 Aligned_cols=209 Identities=20% Similarity=0.317 Sum_probs=171.6
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i 91 (233)
...+.+|.+.|++++|+|++++|++|+.||+|+||++.... ......+.+|..+|.+++|+|+. +.+|++|+.||.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE--EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC--CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 35678999999999999999999999999999999986321 22334678999999999998762 5688999999999
Q ss_pred EEEECCCCe--eeeeee-ecCCeeEEEECCC--CCeEEEEcCCCcEEEEEcCCCeee---eeeecCceeeEEEECC----
Q 026765 92 RLWDARSGK--CSQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPI---HRRKFGYEVNEIAWNM---- 159 (233)
Q Consensus 92 ~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~---- 159 (233)
++||+.+++ ...... ....+.+++|+|+ +..+++++.|+.+++||++..... ....+...+.++.|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999886 333333 3456778999999 999999999999999999876322 2223456799999999
Q ss_pred ---------CCCEEEEEeCCCeEEEEecCCc----eeeeEEeeecCceeEEEECCC---CCEEEEeeCCCcEEEEecCCc
Q 026765 160 ---------TGEMFFLTTGNGTVEVLTYPSL----RPLDTVVAHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 160 ---------~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~i~~~p~---~~~las~s~dg~v~iwd~~~~ 223 (233)
+++.+++++.||.+++||.+.. .....+.+|...|.+++|+|+ +++|++|+.||.|++||+..+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999998765 556677889999999999999 899999999999999999875
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=211.84 Aligned_cols=203 Identities=18% Similarity=0.334 Sum_probs=169.8
Q ss_pred eCccccEEEEEECcC---CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEE------cCCCCCEEEEEeC
Q 026765 17 TGHKKKVHSVAWNCT---GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW------DPKHADLIATASG 87 (233)
Q Consensus 17 ~~H~~~V~~~~~~~~---~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~------~~~~~~~l~sg~~ 87 (233)
.+|.+.|++++|+|+ +++|++|+.|+.|++|++..... ....+.+|...|.+++| +|+ +.+|++|+.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM---PVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS---CSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc---cEEEEEecccceEEEeeccccccCCC-ccEEEEEeC
Confidence 379999999999998 69999999999999999875321 23357799999999965 555 468899999
Q ss_pred CCeEEEEECCCCe-eeeeeeec-C----CeeEEE----ECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEE
Q 026765 88 DKTVRLWDARSGK-CSQQAELS-G----ENINIT----YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAW 157 (233)
Q Consensus 88 d~~i~iwd~~~~~-~~~~~~~~-~----~~~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 157 (233)
|+.|++||+++++ ....+... + ...+++ |+|+++++++++.|+.+++||+++.+......+...+.++.|
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~ 217 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEF 217 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEc
Confidence 9999999998876 44444321 1 445566 789999999999999999999999887766667788999999
Q ss_pred CC---CCCEEEEEeCCCeEEEEecCCceeeeEEe-----eecCceeEEEECCCCC-EEEEeeCCCcEEEEecCCc
Q 026765 158 NM---TGEMFFLTTGNGTVEVLTYPSLRPLDTVV-----AHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 158 ~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~~ 223 (233)
+| +++.+++++.+|.+++||.++.++...+. +|...|.+++|+|+++ +|++|+.||.|++||+..+
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 99 99999999999999999998776665554 8999999999999998 8999999999999999853
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-31 Score=218.41 Aligned_cols=213 Identities=22% Similarity=0.388 Sum_probs=175.5
Q ss_pred ccceeeeCccccEEEEEECcCCC-EEEEEeCCCCEEEEecccCCCC-ce--eeEEEecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 11 LHSREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHG-KV--KDIELRGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 11 ~~~~~~~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~~~~~~~-~~--~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
.....+.+|.+.|++++|+|++. +|++|+.||+|++|++...... .. ....+.+|...|.+++|+|.++.+|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 34567889999999999999998 9999999999999999753221 11 12356789999999999997788999999
Q ss_pred CCCeEEEEECCCC---eeeeeee-ecCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCC-eeeeeee-cCceeeEEEECC
Q 026765 87 GDKTVRLWDARSG---KCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRKF-KPIHRRK-FGYEVNEIAWNM 159 (233)
Q Consensus 87 ~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~-~~~~~~~~~~~~ 159 (233)
.|+.|++||++++ +...... ....+.+++|+|++. .+++|+.|+.|++||++.. .++.... +...+.++.|+|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 9999999999976 3333333 345677899999987 5889999999999999873 4444443 566899999999
Q ss_pred CCC-EEEEEeCCCeEEEEecCC--------------ceeeeEEeeecCceeEEEECCCCC-EEEEeeCCCcEEEEecCCc
Q 026765 160 TGE-MFFLTTGNGTVEVLTYPS--------------LRPLDTVVAHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 160 ~~~-~~~~~~~~~~v~~~~~~~--------------~~~~~~~~~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~~ 223 (233)
+++ ++++++.|+.+++|++.. .+.+..+.+|...|.+++|+|+++ +|++++.||.|+||++.+.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 996 588889999999999875 255666778999999999999999 8999999999999999754
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=227.91 Aligned_cols=204 Identities=10% Similarity=0.105 Sum_probs=162.2
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEE--EEcCCCCCEEEEEeCCCeE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQL--CWDPKHADLIATASGDKTV 91 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~l~sg~~d~~i 91 (233)
.++.+|.+.|++++|+++ ..|++|+.||+|++||+..... ....+.+|...|.++ +|+|++..+|+||+.|++|
T Consensus 260 ~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tv 335 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYF 335 (524)
T ss_dssp EEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEE
T ss_pred EEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeE
Confidence 478899999999999986 5899999999999999975321 223578999999999 4666544789999999999
Q ss_pred EEEECCCCeeeeeeeecC---CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeee-eecCceeeEEEECCCCCEEEEE
Q 026765 92 RLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 167 (233)
+|||++++++...+..+. .+.+++|+|++..+++++.|+.+++||++....... ..+...|.+++|+|++++++++
T Consensus 336 klWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 336 YIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp EEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEE
T ss_pred EEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEE
Confidence 999999877654443222 356799999999999999999999999988765443 3456689999999999999999
Q ss_pred eCCCeEEEEecCC--------------------------------------------ceeeeEEeeecCceeEEEECCCC
Q 026765 168 TGNGTVEVLTYPS--------------------------------------------LRPLDTVVAHTAGCYCIAIDPMG 203 (233)
Q Consensus 168 ~~~~~v~~~~~~~--------------------------------------------~~~~~~~~~~~~~v~~i~~~p~~ 203 (233)
+.|+++++|+... +.....+.+|...|++++|+|++
T Consensus 416 s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 416 SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCST
T ss_pred ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCC
Confidence 9999999887421 01122344678889999999996
Q ss_pred C---EEEEeeCCCcEEEEecC
Q 026765 204 R---YFAVGSADSLVSLWDIS 221 (233)
Q Consensus 204 ~---~las~s~dg~v~iwd~~ 221 (233)
+ ++|+|+.||+|+||++.
T Consensus 496 ~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 496 AGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp TTTTEEEEECTTSEEEEEECS
T ss_pred CccHHHHhhccCceEEEEEcc
Confidence 4 99999999999999987
No 79
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.4e-31 Score=214.26 Aligned_cols=206 Identities=12% Similarity=0.125 Sum_probs=169.7
Q ss_pred eCccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCceeeEEEe---cCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 17 TGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELR---GHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 17 ~~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
.+|.+.|++++|+| ++++|++++.|++|++||+.. ... ..+. +|...|.+++|+|++ .+|++|+.|+.|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~--~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVI--QVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLL 188 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEE--EEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---Cce--EEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEE
Confidence 47999999999999 789999999999999999873 111 2233 345889999999975 6889999999999
Q ss_pred EEECCCCeeeeeee-ecCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCC----CeeeeeeecCceeeEEEECC-CCCEEE
Q 026765 93 LWDARSGKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRK----FKPIHRRKFGYEVNEIAWNM-TGEMFF 165 (233)
Q Consensus 93 iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~ 165 (233)
+||++ ++....+. ....+.+++|+|++. ++++++.|+.+++||+++ ...+....+...+.+++|+| ++++++
T Consensus 189 i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 267 (383)
T 3ei3_B 189 LLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLL 267 (383)
T ss_dssp EEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEE
T ss_pred EEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEE
Confidence 99995 44444444 345678899999999 899999999999999987 44555556677899999999 999999
Q ss_pred EEeCCCeEEEEecCCceeeeEEeeec-----------------CceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTVVAHT-----------------AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~~~~~-----------------~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
+++.|+.+++||.++.+....+.+|. ..+..++++|++++ +|+.|+.|+|||+.+++++++
T Consensus 268 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 268 TTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp EEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEE
T ss_pred EEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeee
Confidence 99999999999998877777776654 23445777777777 788999999999999999998
Q ss_pred eec
Q 026765 229 FTK 231 (233)
Q Consensus 229 ~~~ 231 (233)
+..
T Consensus 346 l~~ 348 (383)
T 3ei3_B 346 LRD 348 (383)
T ss_dssp ECB
T ss_pred ecC
Confidence 864
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.2e-31 Score=230.65 Aligned_cols=215 Identities=18% Similarity=0.269 Sum_probs=186.5
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
..+.+.+|.++|++++|+|++++|++|+.|+.|+||++.... ....+.+|...|.+++|+|++ ..|++|+.|+.|
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i 121 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTV 121 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSS-SEEEEEETTSEE
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----EEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEE
Confidence 346788999999999999999999999999999999986432 234578899999999999986 578899999999
Q ss_pred EEEECCCC-eeeeeeee-cCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeeeeec--CceeeEEEECC--CCCEE
Q 026765 92 RLWDARSG-KCSQQAEL-SGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRRKF--GYEVNEIAWNM--TGEMF 164 (233)
Q Consensus 92 ~iwd~~~~-~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~ 164 (233)
++||+.++ .....+.. ...+.+++|+| ++..+++++.|+.+.+||++..+....... ...+..++|+| +++++
T Consensus 122 ~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp EEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred EEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 99999876 44444443 35677899999 888999999999999999987666554443 25789999999 99999
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
++++.+|.+++|+..+.+.+..+.+|...|.+++|+|++++|++|+.||.|++||+.++.+++++..
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 9999999999999999999999999999999999999999999999999999999999988888764
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-31 Score=211.88 Aligned_cols=207 Identities=14% Similarity=0.232 Sum_probs=174.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
....+.+|.+.|++++|+|++++|++++.|++|++||+.... ......+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v 120 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT--WKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVI 120 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE--EEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe--eeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEE
Confidence 446778999999999999999999999999999999986421 22333456799999999999975 688899999999
Q ss_pred EEEECCCCee---eeeee--ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcC------------------CCeeeeee-e
Q 026765 92 RLWDARSGKC---SQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVR------------------KFKPIHRR-K 147 (233)
Q Consensus 92 ~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~------------------~~~~~~~~-~ 147 (233)
++||++.+.. ..... ....+.+++|+|+++++++++.|+.+++||++ ..+.+... .
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 9999987652 22221 24567789999999999999999999999964 33444443 2
Q ss_pred cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 148 FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+...+.+++|+|+++++++++.|+.+++||.++.+.+..+..|...|.+++|+|++++|++| .|+.|++||+..
T Consensus 201 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 201 SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 44579999999999999999999999999999999999999999999999999999988888 999999999987
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-31 Score=212.55 Aligned_cols=199 Identities=16% Similarity=0.255 Sum_probs=171.6
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
|.+.|++++|+|++++|++|+.|+.|++|+... . ....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~----~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG----A-LLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTS----C-EEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC----C-eeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCC
Confidence 788999999999999999999999999999321 1 234577899999999999975 5788999999999999987
Q ss_pred Ceeeeeee---------------------------------------------------------ecCCeeEEEECCCCC
Q 026765 99 GKCSQQAE---------------------------------------------------------LSGENINITYKPDGT 121 (233)
Q Consensus 99 ~~~~~~~~---------------------------------------------------------~~~~~~~~~~~~~~~ 121 (233)
++....+. ....+.+++|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK 260 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence 76433221 122345689999999
Q ss_pred eEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEEC
Q 026765 122 HIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID 200 (233)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~ 200 (233)
++++++.|+.+.+||+++.+...... +...+.++.|++++ .+++++.++.+++|+.++.+.+..+..|...|.+++|+
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 99999999999999998877666554 55679999999999 99999999999999999999999999999999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCcE
Q 026765 201 PMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 201 p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
|++++|++++.||.|+|||+..+.
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHH
T ss_pred CCCCEEEEEECCCeEEEEECCCCc
Confidence 999999999999999999999888
No 83
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2e-31 Score=211.90 Aligned_cols=204 Identities=9% Similarity=0.081 Sum_probs=155.3
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
..++.+|.+.|++++|+|+|++|++|+.|+ ++||++++.. . ....+...+..+++.+.+..++++|+.|+.|+
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA----H--IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE----E--EEEEECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc----e--eeeeecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 345688999999999999999999998665 7899986421 1 11122235777788877655557888999999
Q ss_pred EEECCCCeeeeeeeecCCeeEEEECCCC-----------------------------------CeEEE--EcCCCcEEEE
Q 026765 93 LWDARSGKCSQQAELSGENINITYKPDG-----------------------------------THIAV--GNRDDELTIL 135 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~l~~--~~~d~~i~i~ 135 (233)
+||+.++++...+.....+.++.++++. .+++. |+.++.+++|
T Consensus 85 iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEE
T ss_pred EEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEE
Confidence 9999999887776666666666665532 23443 5678889999
Q ss_pred EcCCCe---------------e-eee-eecCceeeEEEECCCCCEEEEEeCCCe-EEEEecCCceeeeEEe-e-ecCcee
Q 026765 136 DVRKFK---------------P-IHR-RKFGYEVNEIAWNMTGEMFFLTTGNGT-VEVLTYPSLRPLDTVV-A-HTAGCY 195 (233)
Q Consensus 136 d~~~~~---------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~-~-~~~~v~ 195 (233)
|+.+.+ + +.. ..+...+.+++|+|+++++++++.|++ +++||.++++.+..+. + |...|.
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 987644 1 222 234567999999999999999999998 9999999999999988 5 999999
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 196 CIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 196 ~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
+++|+|++++|++|+.|++|+|||+...
T Consensus 245 ~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999999999999999999999999764
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.2e-31 Score=215.18 Aligned_cols=211 Identities=20% Similarity=0.276 Sum_probs=175.2
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCC-CCCEEEEEeCCCe
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKT 90 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sg~~d~~ 90 (233)
...++.+|.+.|++++|+|++ .|++|+.|++|++||+.... ....+.+|...|.+++|++. ++.++++|+.|+.
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc----EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 346778999999999999988 99999999999999986421 33467889999999999852 3468899999999
Q ss_pred EEEEECCCCeeeeee---------------------ee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-
Q 026765 91 VRLWDARSGKCSQQA---------------------EL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK- 147 (233)
Q Consensus 91 i~iwd~~~~~~~~~~---------------------~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~- 147 (233)
|++||++++...... .. .......+++++++++++++.|+.+++||+++.+.+....
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 999999876532110 01 1111223457889999999999999999999888776654
Q ss_pred cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEE
Q 026765 148 FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR 227 (233)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~ 227 (233)
+...+.++.|+++++++++++.||.+++||.++++.+..+.+|...|.+++++ +++|++|+.||.|++||+.++....
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence 45679999999999999999999999999999999999999999999999998 4799999999999999999887665
Q ss_pred ee
Q 026765 228 TF 229 (233)
Q Consensus 228 ~~ 229 (233)
.+
T Consensus 387 ~~ 388 (464)
T 3v7d_B 387 SY 388 (464)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-31 Score=203.97 Aligned_cols=212 Identities=17% Similarity=0.206 Sum_probs=175.6
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+..|.+.|++++|+|++++|++|+.|+.|++|++....... ....+.+|...|.+++|+ +.++++|+.|+.|+
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED-PLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC-C-CEECCCSSCEEEEEEE---TTEEEEEETTSEEE
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC-cccchhhcccCEEEEEec---CCEEEEEeCCCCEE
Confidence 35677899999999999999999999999999999986533222 223567899999999994 35889999999999
Q ss_pred EEECCCCeeeeeeee-cCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCC
Q 026765 93 LWDARSGKCSQQAEL-SGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 93 iwd~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+|| .++....... ...+.++.+.| ++.++++++.|+.+.+||...........+...+.+++|+++++ +++++.+
T Consensus 128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d 204 (313)
T 3odt_A 128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSND 204 (313)
T ss_dssp EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETT
T ss_pred EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCC
Confidence 999 4444444443 45566788877 89999999999999999944322222222556799999999998 8999999
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+.+++||.++++.+..+.+|...|.+++|+|++ .|++++.||.|++||+.++++++++..+
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence 999999999999999999999999999999999 6899999999999999999999888654
No 86
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.2e-31 Score=208.89 Aligned_cols=162 Identities=14% Similarity=0.190 Sum_probs=131.9
Q ss_pred CcEEEEEEcCCCCCEE-EEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeee
Q 026765 67 DSVDQLCWDPKHADLI-ATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR 145 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l-~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 145 (233)
..+..++|+|++..++ ++++.|++|+|||++++++...+...+.+.+++|+|+++++++++.+ .+.+|+..+.+....
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIAR 212 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceee
Confidence 3477899999876543 45668999999999999988888777888999999999999998855 566676665554432
Q ss_pred e---ecCceeeEEEECCCCCEEEEEeCCC----eEEEEecCCcee----eeEEeeecCceeEEEECCCCCEEEEeeCCCc
Q 026765 146 R---KFGYEVNEIAWNMTGEMFFLTTGNG----TVEVLTYPSLRP----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSL 214 (233)
Q Consensus 146 ~---~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~----~~~~~~~~~~v~~i~~~p~~~~las~s~dg~ 214 (233)
. .+...+..++|+|+++.+++++.++ .+..|+...... ...+.+|...|++++|+|+|++||+|+.|++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 2 2345789999999999999998776 577788755432 3456788999999999999999999999999
Q ss_pred EEEEecCCcEEEEee
Q 026765 215 VSLWDISEMLCVRTF 229 (233)
Q Consensus 215 v~iwd~~~~~~i~~~ 229 (233)
|+|||+.++++++++
T Consensus 293 V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 293 IALVKLKDLSMSKIF 307 (365)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999999999986
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-30 Score=235.89 Aligned_cols=218 Identities=21% Similarity=0.296 Sum_probs=185.0
Q ss_pred CccceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 10 NLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 10 ~~~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
......+.+|.+.|++++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|++ .+|++|+.|+
T Consensus 605 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~----~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~ 679 (1249)
T 3sfz_A 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAFSSDD-SYIATCSADK 679 (1249)
T ss_dssp CCCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ccceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC----EEEEeccCCCCEEEEEEecCC-CEEEEEeCCC
Confidence 33445678999999999999999999999999999999986532 334678999999999999975 6889999999
Q ss_pred eEEEEECCCCeeeeeeeec-CCeeEEEECC--CCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEE
Q 026765 90 TVRLWDARSGKCSQQAELS-GENINITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFF 165 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (233)
.|++||+.++++...+..+ ..+.+++|+| ++..+++++.|+.+.+||+++.+...... +...+.+++|+|+++.++
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLA 759 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEE
Confidence 9999999999887776544 4567899999 55688999999999999999887665543 456799999999999999
Q ss_pred EEeCCCeEEEEecCCceeeeEE-------------------------------------------------------eee
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTV-------------------------------------------------------VAH 190 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~-------------------------------------------------------~~~ 190 (233)
+++.||.+++||..+.+....+ .+|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 9999999999998655433222 156
Q ss_pred cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 191 TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 191 ~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
...|.+++|+|+++++++++.||.|++||+.++.++.++..+
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h 881 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGH 881 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCC
Confidence 778999999999999999999999999999999999888764
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-31 Score=210.04 Aligned_cols=208 Identities=13% Similarity=0.210 Sum_probs=169.1
Q ss_pred eeeCccccEEEEEECcC----CCEEEEEeCCCCEEEEecccCCCCc-eeeEEEecCcCcEEEEEEcCCCC---CEEEEEe
Q 026765 15 EYTGHKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDPKHA---DLIATAS 86 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~----~~~l~s~~~D~~v~vW~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~---~~l~sg~ 86 (233)
...+|.++|++++|+|+ ...+++++.|+.|++|++....... +.......|...|.+++|+|++. .+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 4567777778899999987432111 11111123668899999999742 4889999
Q ss_pred CCCeEEEEECCCCeeeeeee-ecCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeeee----ecCceeeEEEECCC
Q 026765 87 GDKTVRLWDARSGKCSQQAE-LSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRR----KFGYEVNEIAWNMT 160 (233)
Q Consensus 87 ~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~~~ 160 (233)
.|+.|++||+.+++....+. ....+.+++|+| ++.++++++.|+.|++||+++.+..... .+...+.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 99999999999988877766 446678899999 8999999999999999999988877665 35668999999999
Q ss_pred CCEEEEEeCCCeEEEEecCCceeeeEEe----------------------------eecCceeEEEECCCCCEEEEeeCC
Q 026765 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVV----------------------------AHTAGCYCIAIDPMGRYFAVGSAD 212 (233)
Q Consensus 161 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------------------------~~~~~v~~i~~~p~~~~las~s~d 212 (233)
++++++++.||.+++||.++.+....+. .|...|.+++|+ +++|++++.|
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 9999999999999999998765443333 388999999998 6799999999
Q ss_pred CcEEEEecCCcE
Q 026765 213 SLVSLWDISEML 224 (233)
Q Consensus 213 g~v~iwd~~~~~ 224 (233)
+.|++||+.++.
T Consensus 251 ~~i~~wd~~~~~ 262 (366)
T 3k26_A 251 NAIVCWKPGKME 262 (366)
T ss_dssp SEEEEEEESSTT
T ss_pred CEEEEEeCCCcc
Confidence 999999998763
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=217.00 Aligned_cols=212 Identities=13% Similarity=0.250 Sum_probs=169.3
Q ss_pred ceeeeCcc------------ccEEEEEECcCC--CEEEEEeCCCCEEEEecccCCCC----------------------c
Q 026765 13 SREYTGHK------------KKVHSVAWNCTG--TKLASGSVDQTARVWHIEPHGHG----------------------K 56 (233)
Q Consensus 13 ~~~~~~H~------------~~V~~~~~~~~~--~~l~s~~~D~~v~vW~~~~~~~~----------------------~ 56 (233)
...+.+|. +.|++++|+|++ .+|++++.|++|++|++...... .
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 45778998 889999999998 79999999999999998642110 0
Q ss_pred --------------eeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eeeeee--------eecCCeeE
Q 026765 57 --------------VKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQA--------ELSGENIN 113 (233)
Q Consensus 57 --------------~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~-~~~~~~--------~~~~~~~~ 113 (233)
.......+|...|.+++|+|++ .+|++| .|+.|++||++.. +..... .....+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 231 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITA 231 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEE
Confidence 0001136799999999999975 678888 8999999999843 333321 22345778
Q ss_pred EEECCCC-CeEEEEcCCCcEEEEEcCCCee----eeeeecCc-------------eeeEEEECCCCCEEEEEeCCCeEEE
Q 026765 114 ITYKPDG-THIAVGNRDDELTILDVRKFKP----IHRRKFGY-------------EVNEIAWNMTGEMFFLTTGNGTVEV 175 (233)
Q Consensus 114 ~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~~ 175 (233)
++|+|++ .++++++.|+.|++||+++.+. ........ .+.+++|+|+++++++++. +.+++
T Consensus 232 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~i 310 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKV 310 (447)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEE
T ss_pred EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEE
Confidence 9999998 9999999999999999988664 33333221 7999999999999999999 99999
Q ss_pred EecCC-ceeeeEEeeecCc---------------eeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEE
Q 026765 176 LTYPS-LRPLDTVVAHTAG---------------CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR 227 (233)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~---------------v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~ 227 (233)
||.+. .+++..+.+|... +..++|+|++++|++|+.||.|+|||+.+++.+.
T Consensus 311 wd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 311 WDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred EeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 99986 8888888888642 2349999999999999999999999999987763
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.9e-31 Score=215.28 Aligned_cols=210 Identities=20% Similarity=0.315 Sum_probs=172.5
Q ss_pred ceeeeCccccEEEEEECcC-CCEEEEEeCCCCEEEEecccCCC------CceeeEEEecCcCcEEEEEEcCCCCCEEEEE
Q 026765 13 SREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGH------GKVKDIELRGHADSVDQLCWDPKHADLIATA 85 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~-~~~l~s~~~D~~v~vW~~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 85 (233)
.....+|.+.|++++|+|+ +.+|++++.||.|++|++..... .......+.+|...|.+++|+|.+..+|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3455689999999999997 68999999999999999975210 0123346789999999999999877689999
Q ss_pred eCCCeEEEEECCCCee-------eeee-eecCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCC---eeeeee-ecCcee
Q 026765 86 SGDKTVRLWDARSGKC-------SQQA-ELSGENINITYKP-DGTHIAVGNRDDELTILDVRKF---KPIHRR-KFGYEV 152 (233)
Q Consensus 86 ~~d~~i~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~-~~~~~~ 152 (233)
+.||.|++||+..+.. ...+ .....+.+++|+| ++..+++++.|+.|++||++.. +.+... .+...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987422 1222 2334577899999 6788899999999999999876 344333 355679
Q ss_pred eEEEECCCCC-EEEEEeCCCeEEEEecCC-ceeeeEEeeecCceeEEEECCCCC-EEEEeeCCCcEEEEecCC
Q 026765 153 NEIAWNMTGE-MFFLTTGNGTVEVLTYPS-LRPLDTVVAHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISE 222 (233)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~ 222 (233)
++++|+|+++ ++++++.+|.+++||++. .+++..+..|...|.+++|+|+++ +|++++.|+.|+|||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999997 588999999999999987 567888889999999999999995 699999999999999986
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-31 Score=210.52 Aligned_cols=211 Identities=12% Similarity=0.030 Sum_probs=174.1
Q ss_pred eeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCC-EEEEEeCCCeEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD-LIATASGDKTVRLW 94 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sg~~d~~i~iw 94 (233)
..+|.+.|++++|+|++++|++++.|+.|++|++..... ......+.+|...|.+++|+|+ +. +|++|+.|+.|++|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK-NVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT-EEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc-cccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEE
Confidence 458999999999999999999999999999999975331 1122345689999999999997 46 78899999999999
Q ss_pred EC-CCCeeeeeee--ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCC---------CeeeeeeecCceeeEEEECCCCC
Q 026765 95 DA-RSGKCSQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVRK---------FKPIHRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 95 d~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 162 (233)
|+ .+++...... ....+.+++|+| +..+++++.|+.+++||+++ .+.+....+...+.+++|++++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 99 8776543333 455677899999 99999999999999999987 5555555566789999999877
Q ss_pred EEEEEeCCCeEEEEecCC-ce--eeeEEeeecCceeEEEECC-CCCEEEEeeCCCcEEEEecCCc------EEEEeeec
Q 026765 163 MFFLTTGNGTVEVLTYPS-LR--PLDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEM------LCVRTFTK 231 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~-~~--~~~~~~~~~~~v~~i~~~p-~~~~las~s~dg~v~iwd~~~~------~~i~~~~~ 231 (233)
+++++.++.+++|+.+. .. .......|...+.+++|+| ++++|++|+.||.|+|||++.. .++.+|..
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec
Confidence 89999999999999987 43 2233456788999999999 9999999999999999999876 56666654
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-32 Score=219.05 Aligned_cols=212 Identities=11% Similarity=0.111 Sum_probs=171.1
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCce---------eeEEEec--CcCcEEEEE--EcCCCCCEEEE
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV---------KDIELRG--HADSVDQLC--WDPKHADLIAT 84 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~---------~~~~~~~--h~~~v~~~~--~~~~~~~~l~s 84 (233)
+|.+.|++++|+|++++|++|+.|++|++||++....+.. ..+.+.. +...+.++. ++++ +.+|++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC-CCEEEE
Confidence 5999999999999999999999999999999852111111 1111112 455566666 4454 468899
Q ss_pred EeCCCeEEEEECCCCeeeeeeee---cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEEC-
Q 026765 85 ASGDKTVRLWDARSGKCSQQAEL---SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWN- 158 (233)
Q Consensus 85 g~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~- 158 (233)
|+.|+.|++||++++++...+.. ...+.+++|+|+++++++|+.|+.|++||++..+.+.... ....+.++.|+
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999988777664 4677889999999999999999999999999988877654 34578899655
Q ss_pred ---CCCCEEEEEeCCCeEEEEecCCceeeeEEee--------------------------ecCceeEEEECCCCCEEEEe
Q 026765 159 ---MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA--------------------------HTAGCYCIAIDPMGRYFAVG 209 (233)
Q Consensus 159 ---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------------------------~~~~v~~i~~~p~~~~las~ 209 (233)
++++++++++.|+.+++||.++++.+..+.+ |...|.+++|+ ++++|++|
T Consensus 268 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~ 346 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD 346 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec
Confidence 5678999999999999999998887777664 44558888998 67899999
Q ss_pred eCCCcEEEEecCCcEEEEeeec
Q 026765 210 SADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 210 s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
+.||.|++||+.++++++++..
T Consensus 347 ~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 347 EATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GGGTEEEEEETTCGGGCEEEEC
T ss_pred CCCCeEEEEECCCcccceEEec
Confidence 9999999999999988887765
No 93
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=9.8e-32 Score=208.58 Aligned_cols=200 Identities=9% Similarity=0.087 Sum_probs=147.6
Q ss_pred ccccEEEEEECcC----CCEEEEEeC--------------------CCCEEEEecccCCCCceeeEEEecCcCcEEEEEE
Q 026765 19 HKKKVHSVAWNCT----GTKLASGSV--------------------DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74 (233)
Q Consensus 19 H~~~V~~~~~~~~----~~~l~s~~~--------------------D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~ 74 (233)
|.+.|++++|+|+ +..+++++. |+.|++|++.+.+ + ....+.+|...++.++|
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--~-~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--G-GKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS--C-EEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC--c-eeeeeccCCCceeeEEe
Confidence 4557888888888 777777553 8999999986532 2 22345678888888888
Q ss_pred cC--CCCCEEEEEeCCCeEEEEECCCCeeeeeeeecC----CeeEEEECCCCCeE------------EEEcCCCcEEEEE
Q 026765 75 DP--KHADLIATASGDKTVRLWDARSGKCSQQAELSG----ENINITYKPDGTHI------------AVGNRDDELTILD 136 (233)
Q Consensus 75 ~~--~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l------------~~~~~d~~i~i~d 136 (233)
+| .++.+|+||+.|++|+|||+.++++...+..+. .+..++|+|++.++ ++|+.|+++++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 87 235789999999999999999999888775322 23457899999876 5677899999999
Q ss_pred cCCCeeeeeee----cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCcee-EEEECCCCCEEEEeeC
Q 026765 137 VRKFKPIHRRK----FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCY-CIAIDPMGRYFAVGSA 211 (233)
Q Consensus 137 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~-~i~~~p~~~~las~s~ 211 (233)
..+.+.+.... .++....+..+.++..+++++.|++|++||+.+++.+.++.+|...+. +++|+|+|++|++|+.
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 98887654332 122212233333467889999999999999999999999999987765 5899999999999999
Q ss_pred CCcEEEEecC
Q 026765 212 DSLVSLWDIS 221 (233)
Q Consensus 212 dg~v~iwd~~ 221 (233)
|++|+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 9999999963
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=208.75 Aligned_cols=213 Identities=17% Similarity=0.230 Sum_probs=172.3
Q ss_pred eCccccEEEEEECcCCC-EEEEEeCCCCEEEEec----ccCCCCc-e-eeEEEec----------CcCcEEEEEEcCCCC
Q 026765 17 TGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHI----EPHGHGK-V-KDIELRG----------HADSVDQLCWDPKHA 79 (233)
Q Consensus 17 ~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~----~~~~~~~-~-~~~~~~~----------h~~~v~~~~~~~~~~ 79 (233)
..|.+.|++++|+|+++ +||+|+.|+.|++|++ ....... . ....+.. |...|.+++|+|++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~- 120 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG- 120 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS-
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC-
Confidence 34669999999999999 9999999999999999 5422100 0 1112222 67899999999975
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-----------
Q 026765 80 DLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK----------- 147 (233)
Q Consensus 80 ~~l~sg~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------- 147 (233)
.+|++|+.|+.|++|| .+++....+. ....+.+++|+|+++++++++.|+.+.+||+.+.+.+....
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 6889999999999999 4555555544 34567789999999999999999999999987655432211
Q ss_pred ----------------------------------------------cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCc
Q 026765 148 ----------------------------------------------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL 181 (233)
Q Consensus 148 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 181 (233)
+...+.+++|+++++++++++.++.+++|+.++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 1235788999999999999999999999999998
Q ss_pred eeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 182 RPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 182 ~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+....+..|...|.+++|+|++ +|++++.|+.|++||+.+++++..+..+
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 329 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD 329 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC
Confidence 8888898999999999999999 9999999999999999999998887653
No 95
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=5.7e-32 Score=217.87 Aligned_cols=201 Identities=11% Similarity=0.109 Sum_probs=148.3
Q ss_pred eeeCccccEEEEEECc--------CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 15 EYTGHKKKVHSVAWNC--------TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~--------~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
.+.||.+.|++|+|+| ++++|||||.|++|||||+.... ....+.+|...|.+++|+|+++.+|++|+
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~----~~~~~~~~~~~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG----PILAGYPLSSPGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE----EEEEEEECSSCEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc----eeeeecCCCCCcEEEEECCCCCceEEecC
Confidence 4679999999999998 78999999999999999986422 33456688999999999998877899999
Q ss_pred CCCeEEEEECCCCeeeeeee--------------------------ecCCeeEEEE-CCCCCeEEEEcCCCcEEEEEcCC
Q 026765 87 GDKTVRLWDARSGKCSQQAE--------------------------LSGENINITY-KPDGTHIAVGNRDDELTILDVRK 139 (233)
Q Consensus 87 ~d~~i~iwd~~~~~~~~~~~--------------------------~~~~~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~ 139 (233)
.|++|++||+++++...... ....+.++.| .|+++.+++++.|+.+++||+..
T Consensus 207 ~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 207 RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA 286 (393)
T ss_dssp TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--
T ss_pred CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc
Confidence 99999999998775432211 1122345666 48999999999999999999875
Q ss_pred Ceeeeeeec-C-------------------ceeeEEEECCCCC-EEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEE
Q 026765 140 FKPIHRRKF-G-------------------YEVNEIAWNMTGE-MFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIA 198 (233)
Q Consensus 140 ~~~~~~~~~-~-------------------~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~ 198 (233)
.+....... . ..+..+.+.+.++ ++++++.||.|++||..+++....+..|...|.+++
T Consensus 287 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sva 366 (393)
T 4gq1_A 287 NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFC 366 (393)
T ss_dssp -----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEE
Confidence 443222110 0 0111222333334 456677899999999999888888889999999999
Q ss_pred ECCCCCEEEEeeCCCcEEEEec
Q 026765 199 IDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 199 ~~p~~~~las~s~dg~v~iwd~ 220 (233)
|+|+|++||+++.|| +.+|.+
T Consensus 367 fspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 367 WHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ECTTSSEEEEEESSE-EEEEEE
T ss_pred EcCCCCEEEEEeCCC-eEEEEE
Confidence 999999999999877 555544
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-30 Score=201.43 Aligned_cols=203 Identities=20% Similarity=0.224 Sum_probs=172.1
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|...|++++| +++++++++.|+.|++||.. .....+..|...+.+++|.|.++.++++++.|+.|+
T Consensus 97 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp -CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEE
T ss_pred ccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEE
Confidence 4577899999999999 68899999999999999921 133467789999999999985567899999999999
Q ss_pred EEECCCCeeeeeee--ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeC
Q 026765 93 LWDARSGKCSQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (233)
Q Consensus 93 iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (233)
+||.. +....+. ....+.+++|+|++. +++++.|+.+.+||+++.+.+.... +...+.+++|+|++ .+++++.
T Consensus 169 i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 244 (313)
T 3odt_A 169 LWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE 244 (313)
T ss_dssp EEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEET
T ss_pred EEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEec
Confidence 99943 3333333 345667899999988 8999999999999999888776655 56679999999999 6889999
Q ss_pred CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
||.+++||.++++....+..|...|.+++|+|+++ +++++.||.|++||+++++.+.+
T Consensus 245 dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 245 DRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred CCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999999999999999999999999999999998 66799999999999998766544
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-30 Score=206.26 Aligned_cols=208 Identities=19% Similarity=0.270 Sum_probs=165.7
Q ss_pred CccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCC--CEEEEEeCCCeEEEE
Q 026765 18 GHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHA--DLIATASGDKTVRLW 94 (233)
Q Consensus 18 ~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~sg~~d~~i~iw 94 (233)
+|.+.|++++|+| ++.+|++++.|+.|++||+.... . .....+...+.++.+.|.+. .++++|+.|+.|++|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ----T-ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLC 171 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE----E-EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc----c-ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEE
Confidence 6999999999999 77899999999999999986421 1 12234778899999988643 388999999999999
Q ss_pred ECCCCeeeeeeee-cCCeeEEEECCCCCe-EEEEcCCCcEEEEEcCCCee-eee----------------eecCceeeEE
Q 026765 95 DARSGKCSQQAEL-SGENINITYKPDGTH-IAVGNRDDELTILDVRKFKP-IHR----------------RKFGYEVNEI 155 (233)
Q Consensus 95 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~-~~~----------------~~~~~~~~~~ 155 (233)
|+++++....+.. ...+.+++|+|++.+ +++++.|+.+++||++.... ... ..+...+.++
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9998877666653 456778999999985 88999999999999976541 111 1234568999
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCc-----------------------------------------------eeeeEEe
Q 026765 156 AWNMTGEMFFLTTGNGTVEVLTYPSL-----------------------------------------------RPLDTVV 188 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------------------------------------~~~~~~~ 188 (233)
+|+|+++++++++.|+.+++|+..++ +.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 99999999999999999999997643 3345567
Q ss_pred eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 189 AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 189 ~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+|...|.+++|+|++++|++|+.||.|++||+.+.+++....
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 799999999999999999999999999999999988776543
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.4e-30 Score=205.25 Aligned_cols=203 Identities=20% Similarity=0.320 Sum_probs=169.0
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
.|.+.|++++|+|++++|++|+.||.|++||+.... ....+.+|...|.+++|++ .++++|+.|+.|++||++
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT----KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe----EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecc
Confidence 389999999999999999999999999999986432 2345779999999999953 588999999999999998
Q ss_pred C-Ceeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEE-e--CCC
Q 026765 98 S-GKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLT-T--GNG 171 (233)
Q Consensus 98 ~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~--~~~ 171 (233)
. +.....+. ....+.+++|+|++.++++++.|+.+++||+++.+...... +...+.+++|+|++..+++. + .|+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4 34444443 34567789999999999999999999999999877765543 55679999999987655554 3 599
Q ss_pred eEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEE--eeCCCcEEEEecCCcEEEEe
Q 026765 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAV--GSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las--~s~dg~v~iwd~~~~~~i~~ 228 (233)
.+++||..+++.+..+. +...|.+++|+|++++|++ |+.||.|+|||+.++.....
T Consensus 285 ~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 285 QIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 99999999988887775 6778999999999999998 55899999999998665544
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-29 Score=207.95 Aligned_cols=213 Identities=11% Similarity=0.062 Sum_probs=172.9
Q ss_pred eeCccccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
..+|.+.|++++|+|++++| ++|+.|++|+||++..........+....|...|.+++|+|++ .+|++|+.|+.+++|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSI 176 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEE
Confidence 34788899999999999996 9999999999999973122233333334678899999999975 678899999999999
Q ss_pred ECCCCeeee----eee-ecCCeeEEEECCC---CCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECCCCCEE
Q 026765 95 DARSGKCSQ----QAE-LSGENINITYKPD---GTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 95 d~~~~~~~~----~~~-~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 164 (233)
++.++.... .+. ....+.+++|+|+ +++|++++.|+.|++||+++.+.+.... +...+.+++|+ +++++
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEE
Confidence 998776442 333 3456778999999 9999999999999999998877665533 45679999999 99999
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeee-------------------------cCceeEEEECCCCCEEEEee-CCCcEEEE
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAH-------------------------TAGCYCIAIDPMGRYFAVGS-ADSLVSLW 218 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~-------------------------~~~v~~i~~~p~~~~las~s-~dg~v~iw 218 (233)
++++.|+.+++||+.+++.+..+..+ ...|.+++|+|++++|++++ .|+.|+||
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 99999999999999998887777532 34688999999999999999 89999999
Q ss_pred ec--CCc---EEEEeee
Q 026765 219 DI--SEM---LCVRTFT 230 (233)
Q Consensus 219 d~--~~~---~~i~~~~ 230 (233)
|+ .++ .+++++.
T Consensus 336 ~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIIT 352 (450)
T ss_dssp EECSSSTTCEEEEEEEE
T ss_pred EeccCCCCceeeccEec
Confidence 99 555 6666664
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.2e-30 Score=224.25 Aligned_cols=209 Identities=20% Similarity=0.247 Sum_probs=171.2
Q ss_pred ceeeeCccccEEEEEECcC--CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCC
Q 026765 13 SREYTGHKKKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~--~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~ 89 (233)
...+.+|.++|++++|+|+ +++|+||+.||+|++||+.... ......+.+|...|.+++|+|+. +.++++|+.|+
T Consensus 46 ~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 4567899999999999988 9999999999999999987521 12334567899999999999973 46889999999
Q ss_pred eEEEEECCCCeeeee--e-eecCCeeEEEECC-------------CCCeEEEEcCCCcEEEEEcCCCe----eeeee-ec
Q 026765 90 TVRLWDARSGKCSQQ--A-ELSGENINITYKP-------------DGTHIAVGNRDDELTILDVRKFK----PIHRR-KF 148 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~--~-~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~----~~~~~-~~ 148 (233)
.|++||++++..... . .....+.+++|+| ++..+++|+.|+.|++||+++.. ..... .+
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 999999988743222 2 2345677899999 58999999999999999998753 22222 24
Q ss_pred CceeeEEEECCC---CCEEEEEeCCCeEEEEecCCce-----eeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEec
Q 026765 149 GYEVNEIAWNMT---GEMFFLTTGNGTVEVLTYPSLR-----PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 149 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~ 220 (233)
...+.+++|+|+ ++++++++.||.+++|+..+.+ .......|...|++++|+|++++|++|+.||.|+|||+
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 567999999999 8999999999999999998753 33334458889999999999999999999999999999
Q ss_pred CCc
Q 026765 221 SEM 223 (233)
Q Consensus 221 ~~~ 223 (233)
..+
T Consensus 284 ~~~ 286 (753)
T 3jro_A 284 NLE 286 (753)
T ss_dssp CSS
T ss_pred CCC
Confidence 853
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=4.1e-30 Score=203.67 Aligned_cols=201 Identities=21% Similarity=0.308 Sum_probs=161.5
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEE--cCCCCCEEEEEeCCCeE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW--DPKHADLIATASGDKTV 91 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~sg~~d~~i 91 (233)
..+.+|.+.|++++|+|++++|++|+.|++|++||+... ....+.+|...|.+++| +|++ .+|++|+.|+.|
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i 153 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN-----QAIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTL 153 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----EEEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEE
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC-----CceeeccccCceEEEEEEeCCCC-CEEEEccCCCcE
Confidence 678899999999999999999999999999999998642 12346679999999999 7764 578899999999
Q ss_pred EEEECCCCeeeeeeeecCC------------------------------------------eeEEEECCCCCe----EEE
Q 026765 92 RLWDARSGKCSQQAELSGE------------------------------------------NINITYKPDGTH----IAV 125 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~----l~~ 125 (233)
++||+++++....+..+.. ...+.+.++... +++
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 9999988765544432221 122333333333 899
Q ss_pred EcCCCcEEEEEcCCCe---eeeeeecCc-------------eeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEee
Q 026765 126 GNRDDELTILDVRKFK---PIHRRKFGY-------------EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA 189 (233)
Q Consensus 126 ~~~d~~i~i~d~~~~~---~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 189 (233)
++.|+.+.+||++... ......... .+.+++|+|+++++++++.||.+++||..+++.+..+..
T Consensus 234 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 9999999999998753 222222211 589999999999999999999999999999999999999
Q ss_pred ecCceeEEEECCCCCEEEEeeCCCcEEEEec
Q 026765 190 HTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 190 ~~~~v~~i~~~p~~~~las~s~dg~v~iwd~ 220 (233)
|...|.+++|+|++++|++|+.|+..+.|++
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CCCCceEEEECCCCCeEEEEecccccccccc
Confidence 9999999999999999999999986555554
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2.6e-29 Score=211.95 Aligned_cols=217 Identities=18% Similarity=0.247 Sum_probs=182.9
Q ss_pred ccceeeeCcccc-EEEEEECc--CCCEEEEEeCCCCEEEEecccCCC----CceeeEEEecCcCcEEEEEEcCCCCCEEE
Q 026765 11 LHSREYTGHKKK-VHSVAWNC--TGTKLASGSVDQTARVWHIEPHGH----GKVKDIELRGHADSVDQLCWDPKHADLIA 83 (233)
Q Consensus 11 ~~~~~~~~H~~~-V~~~~~~~--~~~~l~s~~~D~~v~vW~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 83 (233)
.....+.+|.+. |++++|+| ++++|++|+.|++|++|++..... .......+.+|...|.+++|+|++ .+|+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC-CEEE
Confidence 345678899999 99999999 999999999999999999953200 112334677899999999999986 5677
Q ss_pred EEeCC----CeEEEEECCCCeeeeeee-ecCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCCeeeeeee-cCc---eee
Q 026765 84 TASGD----KTVRLWDARSGKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK-FGY---EVN 153 (233)
Q Consensus 84 sg~~d----~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~---~~~ 153 (233)
+++.+ +.|.+|| .++....+. ....+.+++|+|++. .+++++.|+.+++||+.+.+.+.... +.. .+.
T Consensus 133 ~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR 210 (615)
T ss_dssp EEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEE
T ss_pred EeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEE
Confidence 88877 6889998 344444433 335667899999998 79999999999999999888776655 344 799
Q ss_pred EEEECCC-CCEEEEEeCCCeEEEEecCCceeeeEE-e---eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 154 EIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTV-V---AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 154 ~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~-~---~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
+++|+|+ ++++++++.++.+++|+..+++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+.+++++++
T Consensus 211 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 9999999 999999999999999999999988888 6 899999999999 999999999999999999999999988
Q ss_pred eec
Q 026765 229 FTK 231 (233)
Q Consensus 229 ~~~ 231 (233)
+..
T Consensus 290 ~~~ 292 (615)
T 1pgu_A 290 WTL 292 (615)
T ss_dssp EEC
T ss_pred EcC
Confidence 764
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.5e-29 Score=229.22 Aligned_cols=207 Identities=18% Similarity=0.273 Sum_probs=178.2
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCCe
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKT 90 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~ 90 (233)
...++.+|.+.|++++|+|++++|++|+.|++|+|||+.... ....+.+|...|.+++|+|++ ..++++|+.|+.
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 346778999999999999999999999999999999987532 334678999999999999863 457899999999
Q ss_pred EEEEECCCCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-----------------------
Q 026765 91 VRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR----------------------- 146 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------------------- 146 (233)
|++||++++++...+.. ...+.+++|+|+++++++++.|+.+++||+++.+.....
T Consensus 725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 99999999987776554 356678999999999999999999999998765432221
Q ss_pred ---------------------------------ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCc
Q 026765 147 ---------------------------------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAG 193 (233)
Q Consensus 147 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 193 (233)
.+...+..++|+|+++.+++++.++.+++|+..+.+.+..+.+|...
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc
Confidence 11234678899999999999999999999999999999999999999
Q ss_pred eeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 194 CYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 194 v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
|.+++|+|++++|++++.||.|++||+..
T Consensus 885 v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 99999999999999999999999999764
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.9e-30 Score=209.00 Aligned_cols=209 Identities=12% Similarity=0.156 Sum_probs=168.9
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCC-ceeeE--------------------------------------
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG-KVKDI-------------------------------------- 60 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~-~~~~~-------------------------------------- 60 (233)
..++++++|+|+|++|+++ .++.|++||+...... .+...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4588999999999966655 5889999998653300 00000
Q ss_pred --------------EEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeeeeeee---ecCCeeEEEECCCCC
Q 026765 61 --------------ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--SGKCSQQAE---LSGENINITYKPDGT 121 (233)
Q Consensus 61 --------------~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~--~~~~~~~~~---~~~~~~~~~~~~~~~ 121 (233)
..++|...|.+++|+|++..++++|+.|+.|++||+. ++++...+. ....+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0124555799999999876556899999999999998 777666553 335677899999999
Q ss_pred eEEEEcCCCcEEEEEcCCCeeee----e-eecCceeeEEEECCC---CCEEEEEeCCCeEEEEecCCceeeeE-EeeecC
Q 026765 122 HIAVGNRDDELTILDVRKFKPIH----R-RKFGYEVNEIAWNMT---GEMFFLTTGNGTVEVLTYPSLRPLDT-VVAHTA 192 (233)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~----~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~ 192 (233)
+|++++.++.+.+|++...+... . ..+...+.+++|+|+ ++++++++.|+.+++|+.++.+.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999987665432 2 234567999999999 99999999999999999998887776 458999
Q ss_pred ceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 193 ~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.|.+++|+ ++++|++|+.|+.|+|||+.++++++++.
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 99999999 99999999999999999999999988875
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.3e-29 Score=204.08 Aligned_cols=205 Identities=19% Similarity=0.333 Sum_probs=172.2
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...+.+|.+.|++++| ++++|++|+.||+|++||+.... ....+.+|...|.+++|++ ..+++|+.|+.|+
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~ 236 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE----MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIA 236 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC----EEEEECCCCSCEEEEECCT---TEEEEEETTSCEE
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc----EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEE
Confidence 4567899999999998 78999999999999999986532 2345778999999999974 4889999999999
Q ss_pred EEECCCCeeee---eee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEE
Q 026765 93 LWDARSGKCSQ---QAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 93 iwd~~~~~~~~---~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 167 (233)
+||++++.... ... ....+.++++ +++++++++.|+.+++||+++.+.+.... +...+.++.+ ++++++++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g 312 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSG 312 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEE
Confidence 99998876432 222 2344556777 78899999999999999999888776655 4456788887 57899999
Q ss_pred eCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE---------EEEeeecC
Q 026765 168 TGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML---------CVRTFTKL 232 (233)
Q Consensus 168 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~---------~i~~~~~~ 232 (233)
+.||.+++||.++++.+..+.+|...|.++++ ++++|++|+.||.|+|||+..+. +++++..+
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h 384 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 384 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC
Confidence 99999999999999999999999999999999 67899999999999999998776 78777654
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.1e-28 Score=201.05 Aligned_cols=202 Identities=23% Similarity=0.395 Sum_probs=169.9
Q ss_pred eeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd 95 (233)
..+|...|++++| ++++|++|+.|++|++||+.... ....+.+|...|.+++|+ +.+|++|+.||.|++||
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWD 199 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC----EEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe----EEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEEEE
Confidence 3467788999987 79999999999999999986422 334678999999999993 46899999999999999
Q ss_pred CCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeee---e-eecCceeeEEEECCCCCEEEEEeCC
Q 026765 96 ARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIH---R-RKFGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 96 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+.++++...+..+ ..+.+++|+ +..+++++.|+.+.+||+++.+... . ..+...+.++.| +++++++++.|
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 9999877766543 455667775 4599999999999999998765442 1 223456788888 78999999999
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
|.+++||.++++.+..+.+|...|.+++++ ++++++|+.||.|++||+.++++++++..+
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 999999999999999999999999999994 679999999999999999999999998764
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=3.1e-30 Score=210.20 Aligned_cols=211 Identities=12% Similarity=0.099 Sum_probs=161.7
Q ss_pred eeeeCccccEEEEEECc-CCCEEEEEeCCCCEEEEecccCCCCceeeEEEe--cCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 14 REYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELR--GHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~-~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
..+.+|.+.|++|+|+| ++++|+|||.|++|++||++.. . ...... .+...+.+++|+|++ .+|++|+.|+.
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~ 232 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN---I-LRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGN 232 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC---E-EEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSB
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC---c-eeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCc
Confidence 34568999999999998 6889999999999999998632 1 111222 234467889999975 68899999999
Q ss_pred EEEEECCCCeeeeeee-ecCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCCeeeee----eecCceeeEEEECCCCCEE
Q 026765 91 VRLWDARSGKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHR----RKFGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 164 (233)
|++||++... ...+. ....+.+++|+|++. ++++++.|+.|++||+++.+.... ..+...+.+++|+|+++++
T Consensus 233 i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 233 VILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp EEEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEE
T ss_pred EeeeccCcce-eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCee
Confidence 9999997543 33333 345677899999886 677899999999999987554322 2345679999999999999
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeecC------ceeEEEECCCCCEEEEee------------CCCcEEEEecCCcEEE
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTA------GCYCIAIDPMGRYFAVGS------------ADSLVSLWDISEMLCV 226 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~v~~i~~~p~~~~las~s------------~dg~v~iwd~~~~~~i 226 (233)
++++.||.+++|+..+++....+..|.. .+....|+|++.++++++ .++.|++||..++.++
T Consensus 312 ~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp EEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred EEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 9999999999999988877766665543 233456777777666654 3467999999999888
Q ss_pred Eeee
Q 026765 227 RTFT 230 (233)
Q Consensus 227 ~~~~ 230 (233)
.++.
T Consensus 392 ~~l~ 395 (435)
T 4e54_B 392 CQLY 395 (435)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7753
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.1e-28 Score=201.35 Aligned_cols=205 Identities=23% Similarity=0.354 Sum_probs=173.1
Q ss_pred ceeeeCccccE-EEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKV-HSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V-~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
.+.+.+|.+.| +++. +++++|++|+.|++|++||+.... ....+.+|...|.+++|++ .++++|+.|+.|
T Consensus 111 ~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGHTGGVWSSQMRD---NIIISGSTDRTL 181 (445)
T ss_dssp CEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCC----EEEECCCCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred eEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCc----EEEEEcCCCCCEEEEEecC---CEEEEEeCCCeE
Confidence 45788999875 5555 569999999999999999986432 3346789999999999973 588999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeC
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (233)
++||+.++++...+..+ ..+.++.++ +..+++++.|+.+.+||+++.+.+.... +...+.++.+ +++.+++++.
T Consensus 182 ~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred EEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 99999999877766543 445667774 5689999999999999999887766544 4567888888 7899999999
Q ss_pred CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
||.+++||.++.+.+..+.+|...|.+++| +++++++|+.||.|++||+.++++++++..+
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 999999999999999999999999999999 7889999999999999999999999888654
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-30 Score=206.43 Aligned_cols=193 Identities=10% Similarity=0.058 Sum_probs=155.2
Q ss_pred EECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------
Q 026765 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--------- 97 (233)
Q Consensus 27 ~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~--------- 97 (233)
.+.+++.+|+||+.|++|++||+.... .+.. +. ...|.++.|+|. +++|+.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~--~~~~--~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSK--TITT--IT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSS--CEEE--EE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCc--EEEE--Ee--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecC
Confidence 445678899999999999999987532 2222 22 356777888875 7899999999999765
Q ss_pred CCeeeeeeee--cCCeeEEEECC--CCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECCCCCEEEEEeCCC
Q 026765 98 SGKCSQQAEL--SGENINITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTTGNG 171 (233)
Q Consensus 98 ~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 171 (233)
+++....... ...+.+++|+| +++++++++.|+.+++||+++.+...... ....+.+++|+|+++++++++.||
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 3333333332 24578899999 99999999999999999999887754432 334689999999999999999999
Q ss_pred eEEEEecCCceee-eEEee-ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 172 TVEVLTYPSLRPL-DTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 172 ~v~~~~~~~~~~~-~~~~~-~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.+++||.++++.. ..+.. |...|.+++|+|++.+|++++ |+.|+|||+++..+++++.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSC
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeec
Confidence 9999999988877 67777 999999999999999999999 5599999999887766554
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=8.6e-29 Score=208.79 Aligned_cols=213 Identities=12% Similarity=0.170 Sum_probs=185.2
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCC----CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVD----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D----~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 87 (233)
....+.+|...|++++|+|++++|++++.| +.|++|+.. . ....+.+|...|.+++|+|++..++++++.
T Consensus 108 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~-----~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 181 (615)
T 1pgu_A 108 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG-----N-SLGEVSGHSQRINACHLKQSRPMRSMTVGD 181 (615)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-----C-EEEECCSCSSCEEEEEECSSSSCEEEEEET
T ss_pred ccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-----C-cceeeecCCccEEEEEECCCCCcEEEEEeC
Confidence 345778899999999999999999999988 688888832 1 234678999999999999998768999999
Q ss_pred CCeEEEEECCCCeeeeeeeec-C---CeeEEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeee-----ecCceeeEEEE
Q 026765 88 DKTVRLWDARSGKCSQQAELS-G---ENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRR-----KFGYEVNEIAW 157 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~-~---~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~~~~~~ 157 (233)
|+.|++||+.+++....+..+ . .+.+++|+|+ ++++++++.|+.+.+||+++.+.+... .+...+..+.|
T Consensus 182 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW 261 (615)
T ss_dssp TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEE
T ss_pred CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEE
Confidence 999999999998877766644 3 5778999999 999999999999999999988887766 55668999999
Q ss_pred CCCCCEEEEEeCCCeEEEEecCCceeeeEEeee----cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 158 NMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAH----TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
+ +++++++++.|+.+++|+.++.+.+..+..+ ...+.++.++ +++++++|+.||.|++||+.++++++++..+
T Consensus 262 ~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~ 338 (615)
T 1pgu_A 262 L-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGH 338 (615)
T ss_dssp S-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCC
T ss_pred c-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCC
Confidence 9 9999999999999999999999888888776 3567788885 8899999999999999999999998888654
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.6e-29 Score=203.88 Aligned_cols=204 Identities=17% Similarity=0.222 Sum_probs=167.0
Q ss_pred cEEEEEECcCCCE-EEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-
Q 026765 22 KVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG- 99 (233)
Q Consensus 22 ~V~~~~~~~~~~~-l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~- 99 (233)
....++++|+... +++++.||.|+||++...+........+.+|...|.+++|+|.++.+|++|+.|+.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 3446788887754 45688999999999854221101112467899999999999955679999999999999999887
Q ss_pred ------eeeeeee-ecCCeeEEEECCCC-CeEEEEcCCCcEEEEEcCCCeeeeeee---cCceeeEEEECCCCCEEEEEe
Q 026765 100 ------KCSQQAE-LSGENINITYKPDG-THIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 100 ------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 168 (233)
+....+. ....+.+++|+|++ +++++++.|+.|++||+++.+.+.... +...+.+++|+|+++++++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 3334443 34567789999998 699999999999999999988776662 456799999999999999999
Q ss_pred CCCeEEEEecCCceeeeEE-eeecCc-eeEEEECCCCCEEEEe---eCCCcEEEEecCCcEE
Q 026765 169 GNGTVEVLTYPSLRPLDTV-VAHTAG-CYCIAIDPMGRYFAVG---SADSLVSLWDISEMLC 225 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~-~~~~~~-v~~i~~~p~~~~las~---s~dg~v~iwd~~~~~~ 225 (233)
.|+.+++||.++++.+..+ ..|... +.++.|+|++++|++| +.|+.|++||+..+..
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 9999999999999988888 678765 8999999999999999 7999999999987643
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=198.62 Aligned_cols=199 Identities=10% Similarity=-0.001 Sum_probs=153.1
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccC------CCCceeeEEEecCcCcEEEEEEcC--CCCCEEEEEeCCCeE
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH------GHGKVKDIELRGHADSVDQLCWDP--KHADLIATASGDKTV 91 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~------~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~sg~~d~~i 91 (233)
.+.|+++.|+|+ ++||+.|++|++|+.... ...........+|...|.+++|+| ++ .++++|+.|+.|
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i 151 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTI 151 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcE
Confidence 356777778887 999999999999986521 111211122236778999999999 64 688999999999
Q ss_pred EEEECCCCeeeeeeee--cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeee-eeee--cCceeeEEEECCCCCEEEE
Q 026765 92 RLWDARSGKCSQQAEL--SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-HRRK--FGYEVNEIAWNMTGEMFFL 166 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~ 166 (233)
++||++++++...... ...+.+++|+|++.++++|+.|+.|++||+++.+.. .... +...+.+++|+|+++++++
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 9999999887554422 234678999999999999999999999999987765 3333 4678999999999999999
Q ss_pred EeCCCeEEEEecCCceeeeEEee---ecCcee--EEEECCCCCEEEEeeC-CCcEEEEecCCc
Q 026765 167 TTGNGTVEVLTYPSLRPLDTVVA---HTAGCY--CIAIDPMGRYFAVGSA-DSLVSLWDISEM 223 (233)
Q Consensus 167 ~~~~~~v~~~~~~~~~~~~~~~~---~~~~v~--~i~~~p~~~~las~s~-dg~v~iwd~~~~ 223 (233)
++ ++.+++||++..+....+.. |...+. +++|+|++++|++++. |+.|+||++...
T Consensus 232 ~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 232 EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 99 45999999987765544332 444444 6999999999999998 999999998544
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=8.4e-28 Score=196.21 Aligned_cols=205 Identities=23% Similarity=0.358 Sum_probs=175.7
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
...++.+|.+.|++++|+ ++.+++|+.|++|++||+... .....+.+|...|.+++|++ ..+++|+.|+.|
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i 221 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG----ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATL 221 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEE
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC----cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEE
Confidence 346788999999999997 679999999999999998642 13346789999999999964 478999999999
Q ss_pred EEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeC
Q 026765 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (233)
++||++++++...+..+ ..+.++.+ ++.++++++.|+.+.+||+++.+.+.... +...+.++.| +++.+++++.
T Consensus 222 ~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp EEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC
Confidence 99999998877666543 45566777 78899999999999999999888776654 4457888888 8899999999
Q ss_pred CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
|+.+++||.++++.+..+.+|...+.+++++ +++|++|+.||.|++||+.++++++++..
T Consensus 298 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp TSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECS
T ss_pred CCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEcc
Confidence 9999999999999999999999999888875 57999999999999999999999998864
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-29 Score=203.22 Aligned_cols=191 Identities=10% Similarity=0.063 Sum_probs=154.7
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC-----cEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD-----SVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
+|...|++++|+|+|++||+++.||.|++|+.+. ....+. |.. .|.+++|+|++ ++|++|+.||+|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVk 154 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQ 154 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEE
Confidence 6788999999999999999999999999999532 222344 554 59999999986 5789999999999
Q ss_pred EEECCCCee-------eeeeee-----cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeee---eeee--cCceeeEE
Q 026765 93 LWDARSGKC-------SQQAEL-----SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI---HRRK--FGYEVNEI 155 (233)
Q Consensus 93 iwd~~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~--~~~~~~~~ 155 (233)
+||+.++.. ...+.. ...+.+++|+|+| +++++.|+.+++||+...... ...+ +...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 999988742 233321 2367889999999 888899999999999775532 2232 34579999
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEE--CCCCCEEEEeeCCCcEEEEecCC
Q 026765 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAI--DPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~--~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+|+ ++.+++++ ++.+++|+....+......+|...|..++| +|++..|+++++||+ ++|..+.
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~ 297 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE 297 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc
Confidence 998 67888886 699999999887774444489999999999 999999999999999 9999873
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.8e-27 Score=189.65 Aligned_cols=212 Identities=15% Similarity=0.161 Sum_probs=174.4
Q ss_pred ceeeeCccccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
...+.+|. .+++++|+|+++++ ++++.|++|++||+... . ....+..+ ..+.+++|+|++..++++++.++.|
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---~-~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN---N-VIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTL 98 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---E-EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC---e-EEEEEECC-CCccceEECCCCCEEEEEECCCCEE
Confidence 34566564 58999999999976 77779999999998642 1 12234434 4899999999876666777788999
Q ss_pred EEEECCCCeeeeeeeecCCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEE-EEEeC
Q 026765 92 RLWDARSGKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-FLTTG 169 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 169 (233)
++||+.+++..........+..++|+|+++++ ++++.++.+.+||+++.+.+.....+..+..+.|+++++.+ +++..
T Consensus 99 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETT
T ss_pred EEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCC
Confidence 99999999887777777777889999999987 67888999999999988887777766778999999999987 46677
Q ss_pred CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEee---CCCcEEEEecCCcEEEEeeec
Q 026765 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS---ADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s---~dg~v~iwd~~~~~~i~~~~~ 231 (233)
++.+++||..+.+....+. +...+.+++|+|++++|++++ .++.|++||+.++++++.+..
T Consensus 179 ~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 179 SMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec
Confidence 8999999999887766554 566789999999999998888 689999999999998887764
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.4e-30 Score=206.87 Aligned_cols=214 Identities=16% Similarity=0.159 Sum_probs=139.4
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCcee-eEEEecCcCcEEEEEEcCC-------CCCEEEEEeCCCe
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPK-------HADLIATASGDKT 90 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~-------~~~~l~sg~~d~~ 90 (233)
|.+.+....+++++.+|++|+.|++|||||+......... ...+.+|.+.|.+++|+|. ++++|+||+.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 4444444455556678999999999999998753211111 1125789999999999872 3568999999999
Q ss_pred EEEEECCCCeeee-eeeecCCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCCeeeeeee---------------------
Q 026765 91 VRLWDARSGKCSQ-QAELSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK--------------------- 147 (233)
Q Consensus 91 i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--------------------- 147 (233)
|+|||++++.+.. .......+.+++|+|++. +|++++.|+.|++||+++.+......
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999998776544 445567788999999874 79999999999999997654322110
Q ss_pred -----cCceeeEEEEC-CCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEE------------------CC--
Q 026765 148 -----FGYEVNEIAWN-MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAI------------------DP-- 201 (233)
Q Consensus 148 -----~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~------------------~p-- 201 (233)
+...+..+.|. ++++.+++++.|+.+++||....+....+..|...+..+.+ +|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 11235567765 89999999999999999998876666656555544443333 32
Q ss_pred CCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 202 MGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 202 ~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
++.++++|+.||+|+|||+.+++++..+.++
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~ 358 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQL 358 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEEEEC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 3346788899999999999998877665543
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.8e-27 Score=188.26 Aligned_cols=211 Identities=18% Similarity=0.171 Sum_probs=174.1
Q ss_pred eeeeCccccEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
..+..|. .+++++|+|++++|+ +++.|+.|++||+.... ....+. +...+.+++|+|++..++++++.|+.|+
T Consensus 68 ~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~----~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 68 ATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT----VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe----EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 3444443 899999999999875 55567999999986421 122333 4457899999998766668899999999
Q ss_pred EEECCCCeeeeeeeecCCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEe---
Q 026765 93 LWDARSGKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT--- 168 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 168 (233)
+||+.+++..........+..++|+|+++++ +++..++.+.+||+++.+..........+..++|+++++++++++
T Consensus 142 ~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 142 VINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp EEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS
T ss_pred EEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCc
Confidence 9999999887777767777889999999988 567788999999999988777777777889999999999999887
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEE-EEeeCCCcEEEEecCCcEEEEeeec
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
.++.+.+||..+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.++++++++..
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 68999999999888888777655 57899999999987 6778899999999999999888754
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=9.4e-28 Score=194.86 Aligned_cols=212 Identities=13% Similarity=0.101 Sum_probs=178.4
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.+.+|.+.|++++|+|++.++++++.|+.|++||+.... ....+..|...+.+++|+|++..++++++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA----YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC----EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce----EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE
Confidence 456899999999999999999999999999999986422 2235668889999999999876666777789999999
Q ss_pred ECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc--------CCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEE-E
Q 026765 95 DARSGKCSQQAELSGENINITYKPDGTHIAVGN--------RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-F 165 (233)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (233)
|+++++..........+..++|+|+++++++++ .|+.|.+||+++.+..........+..++|+|+++.+ +
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEE
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEE
Confidence 999988777666666677899999999999887 4789999999988777666555578889999999865 4
Q ss_pred EEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeC---------------CCcEEEEecCCcEEEEeee
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA---------------DSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~---------------dg~v~iwd~~~~~~i~~~~ 230 (233)
++..++.+.+|+..+.+....+. +...+.+++|+|++++|++++. ||.|++||+.+++.++.+.
T Consensus 320 ~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 55889999999999888776664 7778999999999999888876 5799999999999988875
Q ss_pred c
Q 026765 231 K 231 (233)
Q Consensus 231 ~ 231 (233)
.
T Consensus 399 ~ 399 (433)
T 3bws_A 399 A 399 (433)
T ss_dssp C
T ss_pred C
Confidence 4
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.9e-29 Score=217.59 Aligned_cols=211 Identities=15% Similarity=0.099 Sum_probs=164.4
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE--Ee-----cCcCcEEEEEEcCCCCCEEEEEeC
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE--LR-----GHADSVDQLCWDPKHADLIATASG 87 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~--~~-----~h~~~v~~~~~~~~~~~~l~sg~~ 87 (233)
.+.||...+.+++|+|++++|+||+.|++||+||+............ +. +|...|.+++|+|++ .+||+|+.
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg-~~LAsgs~ 508 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET-LELAVSIE 508 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT-TEEEEEET
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC-CeEEEEec
Confidence 46778888888889999999999999999999998754221111112 22 899999999999985 58899999
Q ss_pred CCeEEEEECCCCe---------------------------------------------eeeeee-ecCCeeEEEECCCCC
Q 026765 88 DKTVRLWDARSGK---------------------------------------------CSQQAE-LSGENINITYKPDGT 121 (233)
Q Consensus 88 d~~i~iwd~~~~~---------------------------------------------~~~~~~-~~~~~~~~~~~~~~~ 121 (233)
|++|+|||+.+++ +...+. ..+.+.+++|+|+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 9999999987652 122232 34567889999999
Q ss_pred eEEEEcCCCcEEEEEcCCCeeeeee-------ecCceeeEEEEC-----CCC---CEEEEEeCCCeEEEEec---CCcee
Q 026765 122 HIAVGNRDDELTILDVRKFKPIHRR-------KFGYEVNEIAWN-----MTG---EMFFLTTGNGTVEVLTY---PSLRP 183 (233)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~~~~~~~-----~~~---~~~~~~~~~~~v~~~~~---~~~~~ 183 (233)
+|++|+.|+.|++||+++...+... .+...|++++|+ +|| +.+++++.|+++++|++ .+++.
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcE
Confidence 9999999999999999877665421 123349999999 885 89999999999999998 67777
Q ss_pred eeEEeeec-----CceeEEE-EC----------------------CCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 184 LDTVVAHT-----AGCYCIA-ID----------------------PMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 184 ~~~~~~~~-----~~v~~i~-~~----------------------p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
...+.+|. .+|.+++ |+ +++..|+++ +..||||++.++++++..
T Consensus 668 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~ 739 (902)
T 2oaj_A 668 DVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG 739 (902)
T ss_dssp EEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE
T ss_pred EEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeE
Confidence 77887774 6777776 65 455455554 778999999999888665
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=4.1e-27 Score=183.22 Aligned_cols=204 Identities=17% Similarity=0.296 Sum_probs=156.9
Q ss_pred EEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeee
Q 026765 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~ 102 (233)
.++|+||+++ +||+| .|++|+|||+++. ......++.+|...|.+++|+|++ ++|++|+.|+.|++||++++++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg--~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSG--DILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTC--CEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCC--CEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeE
Confidence 4689999876 66665 5999999998753 233444567889999999999985 68899999999999999987654
Q ss_pred eeeeec------------------------------------------CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCC
Q 026765 103 QQAELS------------------------------------------GENINITYKPDGTHIAVGNRDDELTILDVRKF 140 (233)
Q Consensus 103 ~~~~~~------------------------------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 140 (233)
.....+ .....+.+.++++++++++.|+.+++||+++.
T Consensus 103 ~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred EEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 332211 11234678899999999999999999999865
Q ss_pred eeee-----eeecCceeeEEEECCCCCEEE---EEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEee--
Q 026765 141 KPIH-----RRKFGYEVNEIAWNMTGEMFF---LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS-- 210 (233)
Q Consensus 141 ~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s-- 210 (233)
+... .......+..+.+.+.+..++ .++.++.+++|+......... ..+...+..+.|+|+++.+++++
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEEEECT
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc-ccceeeeeeeeecccccceEEEEEc
Confidence 4321 122344688889988776543 445689999999887665544 45777899999999999887654
Q ss_pred CCCcEEEEecCCcEEEEeeecC
Q 026765 211 ADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 211 ~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.|+.|+|||+.+++++++|.+|
T Consensus 262 ~d~~i~iwd~~~~~~~~~l~gH 283 (318)
T 4ggc_A 262 AQNQLVIWKYPTMAKVAELKGH 283 (318)
T ss_dssp TTCCEEEEETTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCcEEEEEcCC
Confidence 7999999999999999999876
No 121
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=8.7e-27 Score=189.04 Aligned_cols=202 Identities=17% Similarity=0.337 Sum_probs=160.0
Q ss_pred EEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeee
Q 026765 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~ 102 (233)
++.|+|+++ +.||+|. |++|+|||+.+.. .....++.+|...|++++|+|++ .+|++|+.|+.|++||+.++++.
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~--~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCC--EEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEE
Confidence 567999975 5776665 9999999987532 33444567888999999999975 68899999999999999999887
Q ss_pred eeeeecC-CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeee-ee-eecCceeeEEEECCCCCEEEEEeCCCeEEEEecC
Q 026765 103 QQAELSG-ENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-HR-RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (233)
Q Consensus 103 ~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 179 (233)
.....+. .+.++ ++++..+++|+.|+.+.+||.+..... .. ..+...+..+.|+++++++++++.|+.+++|+..
T Consensus 183 ~~~~~h~~~v~~~--s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 183 RNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEECCCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCCceEEE--eeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 7665443 33344 456789999999999999998764332 22 2345678899999999999999999999999987
Q ss_pred Cce----eeeEEeeecCceeEEEECCCCC-EEEE--eeCCCcEEEEecCCcEEEEeeec
Q 026765 180 SLR----PLDTVVAHTAGCYCIAIDPMGR-YFAV--GSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 180 ~~~----~~~~~~~~~~~v~~i~~~p~~~-~las--~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
+.+ .+.....|...|.+++|+|.+. .+++ |+.|++|+|||+.++.++..+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~ 319 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA 319 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc
Confidence 654 3456677899999999999765 4554 56899999999999999888764
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.3e-29 Score=203.18 Aligned_cols=184 Identities=9% Similarity=0.036 Sum_probs=146.6
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
-...|.+|+|+|||+++||+|.|++|+ |.... . .+.+|...|..++|+|++ .++.+.+|+.+.
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~-----~--~l~gh~~~v~~V~FsPdg--------~~~~~~~~~~~~ 76 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA-----K--DINCNSKNLFHVKEFPLE--------FENKLDFELAQQ 76 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC-----S--CCSSBGGGTEEEEEECCC--------CCCTTTTSCCCS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccc-----c--eecCCCccEEEEEECCCC--------CcceEEEEeCCC
Confidence 357899999999999999999999999 64321 1 236899999999999986 566666666443
Q ss_pred CeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc-----eeeEEEECCCCCEEEEEeCCCeE
Q 026765 99 GKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY-----EVNEIAWNMTGEMFFLTTGNGTV 173 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v 173 (233)
.. .........+.+++|+|+|.+|++++.|+.+.+||... .+....+.. .+.+++|+|+|+++++++.||++
T Consensus 77 ~~-~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 77 NG-LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SC-SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred ce-EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 22 22222355678899999999999999999999999543 333323222 48999999999999999999999
Q ss_pred EEEecCCce-------eeeEE----eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 174 EVLTYPSLR-------PLDTV----VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 174 ~~~~~~~~~-------~~~~~----~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
++|+...++ .+.++ .+|...|.+++|+|+| +++++.|++|++||+....
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 999998764 24565 5677899999999999 8899999999999998776
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.7e-25 Score=181.32 Aligned_cols=212 Identities=13% Similarity=0.138 Sum_probs=163.6
Q ss_pred cceeeeCccccEEEEEECcCCCEEEEEeCCC---CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC
Q 026765 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQ---TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~---~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d 88 (233)
..+.+.+|.+.|.+++|+|+|++|++++.|+ .|++||+.... ...+..|...+.+++|+|++..++++++.|
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-----~~~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-----VRQVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-----EEEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 3467788999999999999999999999885 99999987432 224667888999999999976566577776
Q ss_pred Ce--EEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcC-CC--cEEEEEcCCCeeeeeeecCceeeEEEECCCCCE
Q 026765 89 KT--VRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNR-DD--ELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEM 163 (233)
Q Consensus 89 ~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (233)
+. |.+||+.+++.............++|+|+|++|+.++. ++ .|.+||+.+.+..........+..++|+|+|++
T Consensus 245 g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 245 GSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp SSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSE
T ss_pred CCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCE
Confidence 65 89999988876443333455678999999999988775 44 577778877654332334457888999999999
Q ss_pred EEEEeCC---CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCC---cEEEEecCCcEEEEeeec
Q 026765 164 FFLTTGN---GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS---LVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 164 ~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg---~v~iwd~~~~~~i~~~~~ 231 (233)
++.++.+ ..+.+|+..+++. ..+..+. .+.+++|+|+|++|+.++.|+ .|.+||+. +..++.+..
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~ 395 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPA 395 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCC
T ss_pred EEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeC
Confidence 9888754 5899999987665 3455554 789999999999999998877 79999987 445555543
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2.2e-24 Score=174.95 Aligned_cols=203 Identities=12% Similarity=0.079 Sum_probs=164.6
Q ss_pred ceeeeCccccEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe-----
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS----- 86 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~----- 86 (233)
...+..|...+.+++|+|+++.++ +++.|+.|++||+.... ....+. +...+.+++|+|++. .+++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~----~~~~~~-~~~~~~~~~~~~~g~-~l~~~~~~~~~ 277 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL----EIRKTD-KIGLPRGLLLSKDGK-ELYIAQFSASN 277 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE----EEEECC-CCSEEEEEEECTTSS-EEEEEEEESCT
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc----EEEEec-CCCCceEEEEcCCCC-EEEEEECCCCc
Confidence 356678999999999999999885 55579999999986421 122333 345689999999865 555666
Q ss_pred ---CCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCC
Q 026765 87 ---GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 87 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (233)
.|+.|++||+++++..........+..++|+|+++.+ ++++.++.+.+||+.+.+..........+..++|+|+++
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGK 357 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSS
T ss_pred cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCC
Confidence 5889999999998876666555667789999999765 566889999999999888877777777889999999999
Q ss_pred EEEEEeC---------------CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeC-CCcEEEEecCC
Q 026765 163 MFFLTTG---------------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA-DSLVSLWDISE 222 (233)
Q Consensus 163 ~~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~-dg~v~iwd~~~ 222 (233)
++++++. ||.+++||..+++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9888876 46999999999888877765 557899999999999988875 99999999874
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=3.6e-25 Score=175.90 Aligned_cols=198 Identities=9% Similarity=0.094 Sum_probs=146.4
Q ss_pred ccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC----------------C----
Q 026765 21 KKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH----------------A---- 79 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------------~---- 79 (233)
..+..+++.++++.+ ++++.|++|++||+.... .+ .++. |...|.+++++++. .
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~--~~--~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ--DV--SRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRI 133 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE--EE--EEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBS
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc--EE--EEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceee
Confidence 357888999988887 567789999999986421 11 2232 55677777776531 1
Q ss_pred --------------CEEEE--EeCCCeEEEEECCCCe----------------eeeeee-ecCCeeEEEECCCCCeEEEE
Q 026765 80 --------------DLIAT--ASGDKTVRLWDARSGK----------------CSQQAE-LSGENINITYKPDGTHIAVG 126 (233)
Q Consensus 80 --------------~~l~s--g~~d~~i~iwd~~~~~----------------~~~~~~-~~~~~~~~~~~~~~~~l~~~ 126 (233)
.+++. |+.||.|++||+++++ +...+. +...+.+++|+|++++|+++
T Consensus 134 ~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 134 TDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp SCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 12333 5788889999887654 122232 34567789999999999999
Q ss_pred cCCCc-EEEEEcCCCeeeeeee---cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeee--EE-------------
Q 026765 127 NRDDE-LTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD--TV------------- 187 (233)
Q Consensus 127 ~~d~~-i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~------------- 187 (233)
+.|++ +++||+++.+.+.... +...+.+++|+|+++++++++.|+.+++|+++...... .+
T Consensus 214 s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T 3vu4_A 214 SQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW 293 (355)
T ss_dssp ETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccc
Confidence 99998 9999999988887776 56789999999999999999999999999986532111 00
Q ss_pred -------e-eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 188 -------V-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 188 -------~-~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
. .+......++|+|++++|++++.||.+++|++..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 294 SLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0 01122367899999999999999999999998754
No 126
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.5e-24 Score=170.01 Aligned_cols=162 Identities=15% Similarity=0.192 Sum_probs=133.1
Q ss_pred EEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----eeeeee-ecCCeeEEEECC--CCCeEEEEcCCCcEE
Q 026765 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LSGENINITYKP--DGTHIAVGNRDDELT 133 (233)
Q Consensus 61 ~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~----~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~d~~i~ 133 (233)
.+.+|.+.|++++|+|++ .+|++|+.|+.|++||+.++. ....+. ....+.+++|+| ++.+|++++.|+.++
T Consensus 6 ~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 467999999999999975 688999999999999998763 333333 345678899999 699999999999999
Q ss_pred EEEcCCC---------eeeeee-ecCceeeEEEECCC--CCEEEEEeCCCeEEEEecCCcee------------------
Q 026765 134 ILDVRKF---------KPIHRR-KFGYEVNEIAWNMT--GEMFFLTTGNGTVEVLTYPSLRP------------------ 183 (233)
Q Consensus 134 i~d~~~~---------~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~------------------ 183 (233)
+||++.. +..... .+...+.+++|+|+ ++++++++.|+.+++||.++.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999875 223332 24567999999999 99999999999999999754321
Q ss_pred ------------------------------------------eeEEeeecCceeEEEECCCC----CEEEEeeCCCcEEE
Q 026765 184 ------------------------------------------LDTVVAHTAGCYCIAIDPMG----RYFAVGSADSLVSL 217 (233)
Q Consensus 184 ------------------------------------------~~~~~~~~~~v~~i~~~p~~----~~las~s~dg~v~i 217 (233)
+..+.+|...|.+++|+|++ ++|++|+.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 33445688899999999998 89999999999999
Q ss_pred EecCCc
Q 026765 218 WDISEM 223 (233)
Q Consensus 218 wd~~~~ 223 (233)
||+..+
T Consensus 245 wd~~~~ 250 (351)
T 3f3f_A 245 FKITEK 250 (351)
T ss_dssp EEEEEC
T ss_pred EeCCCC
Confidence 999875
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.7e-23 Score=168.38 Aligned_cols=207 Identities=14% Similarity=0.166 Sum_probs=157.9
Q ss_pred ceeeeCccccEEEEEECc--------------CCCEEEEEeCC------CCEEEEecccCCCCceeeEEEecCcCcEEEE
Q 026765 13 SREYTGHKKKVHSVAWNC--------------TGTKLASGSVD------QTARVWHIEPHGHGKVKDIELRGHADSVDQL 72 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~--------------~~~~l~s~~~D------~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~ 72 (233)
.+.+.+|...++.+++++ .+..++.++.+ ++|++||++.. . ...+.+|...+.++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~---~--~~~l~~~~~~v~~~ 184 (415)
T 2hqs_A 110 QNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY---N--QFVVHRSPQPLMSP 184 (415)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC---S--CEEEEEESSCEEEE
T ss_pred eeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC---C--CEEEeCCCCcceee
Confidence 356888888888888775 26777777664 79999998632 1 23466789999999
Q ss_pred EEcCCCCCEEEEEeCCC---eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEE-EEcCCCc--EEEEEcCCCeeeeee
Q 026765 73 CWDPKHADLIATASGDK---TVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDE--LTILDVRKFKPIHRR 146 (233)
Q Consensus 73 ~~~~~~~~~l~sg~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~ 146 (233)
+|+|++ +.|++++.++ .|++||+.++++.........+..++|+|+|++|+ +++.++. |.+||+.+.+.....
T Consensus 185 ~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 185 AWSPDG-SKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EECTTS-SEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred EEcCCC-CEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc
Confidence 999986 4677788775 99999999887755444455677899999999888 6665554 899999876654333
Q ss_pred ecCceeeEEEECCCCCEEEEEeC-CC--eEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCC---CcEEEEec
Q 026765 147 KFGYEVNEIAWNMTGEMFFLTTG-NG--TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD---SLVSLWDI 220 (233)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~d---g~v~iwd~ 220 (233)
.....+..+.|+|+|+.++.++. ++ .+.+|+..+++. ..+..+...+.+++|+|+|++|+.++.+ ..|++||+
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 44556889999999999988876 44 677778776553 3455577788999999999999988865 58999999
Q ss_pred CCcEEE
Q 026765 221 SEMLCV 226 (233)
Q Consensus 221 ~~~~~i 226 (233)
.++++.
T Consensus 343 ~~~~~~ 348 (415)
T 2hqs_A 343 ATGGVQ 348 (415)
T ss_dssp TTCCEE
T ss_pred CCCCEE
Confidence 988763
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=3.5e-22 Score=155.19 Aligned_cols=205 Identities=11% Similarity=0.157 Sum_probs=137.5
Q ss_pred EEEEEECcCC-C--EEEEEeCCCCEEEEecccCCCCceeeEEEecCcC-------------------------cEEEEEE
Q 026765 23 VHSVAWNCTG-T--KLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD-------------------------SVDQLCW 74 (233)
Q Consensus 23 V~~~~~~~~~-~--~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~-------------------------~v~~~~~ 74 (233)
|.++-|-..| + .+++++ ..+|++|++... ........+.+|.. .|..+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSS-SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCC-ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 4555664433 3 456666 689999998753 22223334444444 4556666
Q ss_pred cCC----CCCEEEEEe--------------------CCCeEEEEECC-CCeeeeeeeec-CCeeEEEECC---CCCeEEE
Q 026765 75 DPK----HADLIATAS--------------------GDKTVRLWDAR-SGKCSQQAELS-GENINITYKP---DGTHIAV 125 (233)
Q Consensus 75 ~~~----~~~~l~sg~--------------------~d~~i~iwd~~-~~~~~~~~~~~-~~~~~~~~~~---~~~~l~~ 125 (233)
+|+ + ..+++++ .|+.|++|++. +++.......+ ..+..++|+| ++..|++
T Consensus 120 spd~~~~~-~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 120 SSDDESEK-QVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp ------CC-EEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred CCCccccc-cEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEE
Confidence 665 3 2344444 27888888883 35554443333 3445678888 7789999
Q ss_pred EcCCCcEEEEEcCCCeeeeeeecC----ceeeEEEECCCCCEE------------EEEeCCCeEEEEecCCceeeeEE--
Q 026765 126 GNRDDELTILDVRKFKPIHRRKFG----YEVNEIAWNMTGEMF------------FLTTGNGTVEVLTYPSLRPLDTV-- 187 (233)
Q Consensus 126 ~~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~~~~-- 187 (233)
++.|++|++||+.+++.+..+..+ ..+.+++|+|+|+++ ++++.|+++++|+..+++.+..+
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 999999999999999887776522 245667899999887 45678899999999988877654
Q ss_pred ---eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeecC
Q 026765 188 ---VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (233)
Q Consensus 188 ---~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~~ 232 (233)
.+|.....+..++ +.++|+|+.|++|+|||+.+++++++|.++
T Consensus 279 ~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 279 CLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp CCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred eccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 2555554444443 789999999999999999999999999754
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=4.1e-22 Score=156.39 Aligned_cols=212 Identities=14% Similarity=0.103 Sum_probs=148.4
Q ss_pred CccccEEEEEECcCCCEEEEEeCC-CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEEC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVD-QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D-~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~ 96 (233)
.|...+.+++|+|++++|++++.+ +.|++|+++...........+..+. .+..++|+|++..+++++..++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 477889999999999999998876 9999999973221111222333333 78899999987655555556899999999
Q ss_pred CCC---eeeeeeeecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcCC-Ceeee----ee--ecCceeeEEEECCCCCEEE
Q 026765 97 RSG---KCSQQAELSGENINITYKPDGTHIAVGN-RDDELTILDVRK-FKPIH----RR--KFGYEVNEIAWNMTGEMFF 165 (233)
Q Consensus 97 ~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~~~----~~--~~~~~~~~~~~~~~~~~~~ 165 (233)
..+ +..........+..++|+|+++++++++ .++.+.+||+.. .+... .. ..+..+..++|+|++++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 433 3333333344566799999999888776 889999999976 43321 11 1234677899999999776
Q ss_pred EEe-CCCeEEEEecCC--cee--eeEEee----e--cCceeEEEECCCCCEEE-EeeCCCcEEEEecC----CcEEEEee
Q 026765 166 LTT-GNGTVEVLTYPS--LRP--LDTVVA----H--TAGCYCIAIDPMGRYFA-VGSADSLVSLWDIS----EMLCVRTF 229 (233)
Q Consensus 166 ~~~-~~~~v~~~~~~~--~~~--~~~~~~----~--~~~v~~i~~~p~~~~la-s~s~dg~v~iwd~~----~~~~i~~~ 229 (233)
+++ .++.+.+|+... ++. ...+.. + ...+..++|+|++++|+ ++..|+.|.+||+. ..+.+..+
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 665 789999999853 322 222221 1 22456899999998876 55579999999998 34455544
Q ss_pred e
Q 026765 230 T 230 (233)
Q Consensus 230 ~ 230 (233)
.
T Consensus 274 ~ 274 (343)
T 1ri6_A 274 P 274 (343)
T ss_dssp E
T ss_pred c
Confidence 3
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2.4e-22 Score=154.13 Aligned_cols=205 Identities=13% Similarity=0.121 Sum_probs=150.7
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEeccc-CCCCceeeEEEecC-cCcEEEEEEcCCCCCEEEEEe--CCC
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP-HGHGKVKDIELRGH-ADSVDQLCWDPKHADLIATAS--GDK 89 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~-~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~sg~--~d~ 89 (233)
..+..|.+.|.+++|+|+|++|++++ ++.|++||+.. ... . ....++ ...+.+++|+|++ +.|++++ .++
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~---~-~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~ 108 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP---E-KVDTGFATICNNDHGISPDG-ALYAISDKVEFG 108 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---E-ECCCTTCCCBCSCCEECTTS-SEEEEEECTTTS
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---e-EeccccccccccceEECCCC-CEEEEEEeCCCC
Confidence 45567899999999999999999987 88999999865 321 1 123344 4678899999986 4666777 334
Q ss_pred eEEEEE--CCCCeeeeeeeecCCeeEEEECCCCCeEE-EEcCCCcEEEEEcC--CCeeeeeeecCceeeEEEECCCCCEE
Q 026765 90 TVRLWD--ARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVR--KFKPIHRRKFGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 90 ~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (233)
..+||. +.++. ...+........++|+|++++++ ++..++.+.+|++. +.+..........+..+.|+|+++.+
T Consensus 109 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 109 KSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp SCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred cceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 555554 44444 23333344466789999999887 67788988998853 33333223344568899999999988
Q ss_pred EEEe-CCCeEEEEecC-CceeeeEEeeecCceeEEEECCCCCEEEEeeCC-----------CcEEEEecCCcEE
Q 026765 165 FLTT-GNGTVEVLTYP-SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-----------SLVSLWDISEMLC 225 (233)
Q Consensus 165 ~~~~-~~~~v~~~~~~-~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~d-----------g~v~iwd~~~~~~ 225 (233)
+.++ .++.+.+|+++ .......+..|...+.+++|+|++++|+.++.+ +.|.+||+..++.
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 8776 58899999875 455566677777788999999999999988876 5699999987754
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=8.2e-23 Score=166.40 Aligned_cols=201 Identities=13% Similarity=0.146 Sum_probs=148.5
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCC--------Ccee----eEEEecCcCcEEEEEEcCCCCCEEE---
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH--------GKVK----DIELRGHADSVDQLCWDPKHADLIA--- 83 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~--------~~~~----~~~~~~h~~~v~~~~~~~~~~~~l~--- 83 (233)
+...++.+++++++.++++++.|+ ++||+...... .... ... ..+...|.+++|+|++. +|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~-~lav~~ 111 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNL-TLSACM 111 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSC-EEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCC-EEEEEE
Confidence 345689999999999999999988 99987642100 0100 011 23567899999999864 566
Q ss_pred -EEeCCCeEEEEECCCC--------eeeeeee----ecCCeeEEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeee-ec
Q 026765 84 -TASGDKTVRLWDARSG--------KCSQQAE----LSGENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRR-KF 148 (233)
Q Consensus 84 -sg~~d~~i~iwd~~~~--------~~~~~~~----~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~ 148 (233)
+|+.|+.|+|||++++ +...... +...+.+++|+|+ +.++++++.|+.+++||+++....... .+
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC
Confidence 8899999999998654 1111111 2456788999998 789999999999999999887554332 34
Q ss_pred CceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec-------CceeEEEECCCCCEEEE-eeCCCc------
Q 026765 149 GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-------AGCYCIAIDPMGRYFAV-GSADSL------ 214 (233)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~i~~~p~~~~las-~s~dg~------ 214 (233)
...+.+++|+|+|+++++++.||.+++||.+ ++....+..|. ..|.+++|++++.++++ ++.||.
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 5679999999999999999999999999987 44444444432 37899999998888754 334433
Q ss_pred EEEEecCCc
Q 026765 215 VSLWDISEM 223 (233)
Q Consensus 215 v~iwd~~~~ 223 (233)
+++|++...
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999754
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=3.4e-20 Score=146.32 Aligned_cols=208 Identities=15% Similarity=0.196 Sum_probs=147.2
Q ss_pred eeCccccEEEEEECcCCCEEEEEe-CCCCEEEEecccCCCCceeeE-EEec---------CcCcEEEEEEcCCCCCEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDI-ELRG---------HADSVDQLCWDPKHADLIAT 84 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~-~~~~---------h~~~v~~~~~~~~~~~~l~s 84 (233)
+..|...+..++|+|+|++|++++ .+++|++|++..... .... .+.. +...+.+++|+|++. ++++
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~ 157 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA--LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI 157 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC--EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC--eeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE
Confidence 345677888999999999998888 689999999864221 1111 1211 123488899999876 7778
Q ss_pred EeCCCeEEEEECC-CCeeeeee--ee--cCCeeEEEECCCCCeEEE-EcCCCcEEEEEcCC--Ceee--eeeec-C----
Q 026765 85 ASGDKTVRLWDAR-SGKCSQQA--EL--SGENINITYKPDGTHIAV-GNRDDELTILDVRK--FKPI--HRRKF-G---- 149 (233)
Q Consensus 85 g~~d~~i~iwd~~-~~~~~~~~--~~--~~~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~--~~~~--~~~~~-~---- 149 (233)
...++.|.+||+. +++..... .. ...+..++|+|+|+++++ ...++.+.+|++.. .+.. ..... .
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 7888999999998 45433221 11 224567999999997665 56678999999864 3321 11111 1
Q ss_pred --ceeeEEEECCCCCEEEE-EeCCCeEEEEecC---CceeeeEEeeecCceeEEEECCCCCEEEEeeCC-CcEEEE--ec
Q 026765 150 --YEVNEIAWNMTGEMFFL-TTGNGTVEVLTYP---SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-SLVSLW--DI 220 (233)
Q Consensus 150 --~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~d-g~v~iw--d~ 220 (233)
..+..++|+|+|+++++ ...++.+.+|+.. ..+.+..+..+...+..++|+|+|++|++++.+ +.|.+| |.
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 34778999999998754 4568999999986 335555566666778999999999998888765 899999 55
Q ss_pred CCcEEE
Q 026765 221 SEMLCV 226 (233)
Q Consensus 221 ~~~~~i 226 (233)
++++..
T Consensus 318 ~tg~l~ 323 (347)
T 3hfq_A 318 TSGKLS 323 (347)
T ss_dssp TTCCEE
T ss_pred CCCeEE
Confidence 556543
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=2.1e-20 Score=146.39 Aligned_cols=210 Identities=13% Similarity=0.100 Sum_probs=153.0
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC-C--
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-K-- 89 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~-- 89 (233)
..+..+...+ .++|+|+|++++.++. ++.|.+||+.... .....+..+..+..+++|+|++. .++++..+ +
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~ 108 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP---PKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPF 108 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS---CEEEEEEECSSCCCCEEECTTSS-EEEECCCSSSSC
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc---eeEEecccCCCCccceEECCCCC-EEEEecCCCCcc
Confidence 3444456666 9999999997766665 8999999986532 11234455666666699999865 45555444 3
Q ss_pred eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEE-cCCCc-EEEEEcCCCeee-----eeeecCceeeEEEECCCCC
Q 026765 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDE-LTILDVRKFKPI-----HRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 162 (233)
.|.+||+.+++.............++|+|++++++++ ..++. +.+|++.....+ .....+.....+.|+|+|+
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred cEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 8999999999887777666667889999999876655 45578 999998753322 1122344578899999999
Q ss_pred EEEEEe-CCCeEEEEecCCcee---eeEEeeecCceeEEEECCCCCEEEEee-CCCcEEEEecCCcEE--EEee
Q 026765 163 MFFLTT-GNGTVEVLTYPSLRP---LDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLC--VRTF 229 (233)
Q Consensus 163 ~~~~~~-~~~~v~~~~~~~~~~---~~~~~~~~~~v~~i~~~p~~~~las~s-~dg~v~iwd~~~~~~--i~~~ 229 (233)
++++++ .++.+.+||..+++. +..+. ....+..++|+|+|++|+.++ .++.|.+||+.+++. +.++
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 766554 689999999987776 65555 346678999999999776554 578899999998877 4444
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=2.2e-20 Score=156.10 Aligned_cols=212 Identities=11% Similarity=0.103 Sum_probs=156.8
Q ss_pred eeee-CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcC----CCCCEEEEEe-C
Q 026765 14 REYT-GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP----KHADLIATAS-G 87 (233)
Q Consensus 14 ~~~~-~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~l~sg~-~ 87 (233)
.++. +|. ++.++|+|+|++|++++.|++|++||+..... . ...+++ +...+..++|+| ++. ++++++ .
T Consensus 173 ~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~-~~~~i~-~g~~p~~va~sp~~~~dg~-~l~v~~~~ 246 (543)
T 1nir_A 173 KVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP-T-KVAEIK-IGIEARSVESSKFKGYEDR-YTIAGAYW 246 (543)
T ss_dssp EEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC-E-EEEEEE-CCSEEEEEEECCSTTCTTT-EEEEEEEE
T ss_pred EEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC-c-EEEEEe-cCCCcceEEeCCCcCCCCC-EEEEEEcc
Confidence 4455 443 89999999999999999999999999932111 1 122344 445679999999 865 555665 5
Q ss_pred CCeEEEEECCCCeeeeeeeec------------CCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeee--eeecCcee
Q 026765 88 DKTVRLWDARSGKCSQQAELS------------GENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIH--RRKFGYEV 152 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~ 152 (233)
+++|.+||..+.++...+... ..+..+.++|++..+ ++...++.|.+||+.+.+.+. ....+..+
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~ 326 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL 326 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSC
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCc
Confidence 899999999998877665432 134578899977654 566778999999987754433 33444557
Q ss_pred eEEEECCCCCEEEEEe-CCCeEEEEecCCceeeeEEee----ecCceeEEEECCC-CCEEEEee-CCCcEEEEecCC---
Q 026765 153 NEIAWNMTGEMFFLTT-GNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPM-GRYFAVGS-ADSLVSLWDISE--- 222 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~----~~~~v~~i~~~p~-~~~las~s-~dg~v~iwd~~~--- 222 (233)
..+.|+|+++++++++ .++++.+||..+++.+..+.. |......+ ++|+ +..++++. .|++|.|||+++
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 7899999999877664 589999999999988877764 54433333 4677 66677776 689999999998
Q ss_pred ----cEEEEeeecC
Q 026765 223 ----MLCVRTFTKL 232 (233)
Q Consensus 223 ----~~~i~~~~~~ 232 (233)
.++++++..+
T Consensus 406 ~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 406 PQYAWKKVAELQGQ 419 (543)
T ss_dssp TTTBTSEEEEEECS
T ss_pred chhcCeEEEEEEcC
Confidence 8899998753
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.5e-20 Score=157.05 Aligned_cols=197 Identities=13% Similarity=0.096 Sum_probs=155.0
Q ss_pred EECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe-cCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEEC--CCCeeee
Q 026765 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHADSVDQLCWDPKHADLIATASGDKTVRLWDA--RSGKCSQ 103 (233)
Q Consensus 27 ~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~--~~~~~~~ 103 (233)
+|+|++..+++++.|++|.+||..... .+ ..+. ++. +..++|+|++ ++|++++.|+.|++||+ .++++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--~~--~~i~~g~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK--IV--KVIDTGYA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC--EE--EEEECSTT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce--EE--EEEecCcc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEE
Confidence 388999999999999999999986432 22 2344 443 8899999986 57788999999999999 7888777
Q ss_pred eeeecCCeeEEEECC----CCCeEEEEcC-CCcEEEEEcCCCeeeeeeecC------------ceeeEEEECCCCCEEEE
Q 026765 104 QAELSGENINITYKP----DGTHIAVGNR-DDELTILDVRKFKPIHRRKFG------------YEVNEIAWNMTGEMFFL 166 (233)
Q Consensus 104 ~~~~~~~~~~~~~~~----~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 166 (233)
.+.....+..++|+| +|+++++++. ++.+.+||..+.+.+...... ..+..+.++++++.+++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 776666677899999 9999998884 799999999888877665431 24678899998776554
Q ss_pred -EeCCCeEEEEecCCceeee-EEeeecCceeEEEECCCCCEEEEe-eCCCcEEEEecCCcEEEEeee
Q 026765 167 -TTGNGTVEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 167 -~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~i~~~p~~~~las~-s~dg~v~iwd~~~~~~i~~~~ 230 (233)
...++.+.+||..+.+.+. ....+...+..++|+|++++|+++ ..+++|.+||+.+++++.++.
T Consensus 297 s~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 4678999999997755433 122456678899999999986655 468999999999999998876
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.4e-20 Score=148.35 Aligned_cols=207 Identities=10% Similarity=0.061 Sum_probs=162.2
Q ss_pred ccccEEEEEECcCCCEEEEEeC-------CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSV-------DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~-------D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
....+..++|+|+++++++++. ++.|.+||..... .... +. ....+..++|+|++..+++++..++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~--~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE--VTQA--IH-NDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC--EEEE--EE-ESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe--EEEE--Ee-cCCCcceEEECCCCCEEEEEecCCCEE
Confidence 4567889999999999888774 5689999986422 2222 22 223467789999876677777778999
Q ss_pred EEEECCCCeeeeeeeecC----------CeeEEEECCCCCeEEEEc--CCCcEEEEEcCCCeeeeeee-cCceeeEEEEC
Q 026765 92 RLWDARSGKCSQQAELSG----------ENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRK-FGYEVNEIAWN 158 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~ 158 (233)
.+||..+++......... ....++|+|++++++++. .++.+.+||+.+.+.+.... .+..+..+.|+
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 999999988766655432 146689999999887765 47889999999888877666 45557889999
Q ss_pred CCCCEEEEEeCCCeEEEEecCCceeeeEEee----ecCceeEEEECCCCCEEEEeeC-CCcEEEEecCCcEEEEeee
Q 026765 159 MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPMGRYFAVGSA-DSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 159 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~las~s~-dg~v~iwd~~~~~~i~~~~ 230 (233)
++++.++++..++.+.+||..+++....+.. +...+..++|+|++++++.++. ++.|.+||+.+++.++.+.
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999999999999999999998888776654 3445778999999997766665 5999999999998887765
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=1.7e-20 Score=146.78 Aligned_cols=202 Identities=13% Similarity=0.082 Sum_probs=151.7
Q ss_pred cEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEec---CcCcEEEEEEcCCCCCEEEEEe-----------
Q 026765 22 KVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRG---HADSVDQLCWDPKHADLIATAS----------- 86 (233)
Q Consensus 22 ~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~sg~----------- 86 (233)
.+..++|+|+++++ ++++.++.|.+||+.... ....+.... |...+..++|+|++. .+++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCcccccccccceEECCCCC-EEEEEeccccccccccc
Confidence 47899999999876 555668999999986422 222222221 122567889999865 455554
Q ss_pred -CCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC----------------
Q 026765 87 -GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG---------------- 149 (233)
Q Consensus 87 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---------------- 149 (233)
.++.|.+||+.+++..........+..++|+|++++++++ ++.+.+||+.+.+........
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 5799999999988877666655566778999999988887 678999998766544222110
Q ss_pred ---------------------------------------------------ceeeEEEECCCCCEEEEEeCCCeEEEEec
Q 026765 150 ---------------------------------------------------YEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (233)
Q Consensus 150 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 178 (233)
..+..++|+|++++++++ ++.+.+||.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 013358999999998888 789999999
Q ss_pred CCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeeec
Q 026765 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~~ 231 (233)
.+++.+..+.. ...+.+++|+|++++|++++.++.|++||+.+++.+++++.
T Consensus 268 ~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 268 EKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 98887766653 45678999999999999999999999999999998888753
No 138
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=2.1e-21 Score=158.09 Aligned_cols=163 Identities=14% Similarity=0.228 Sum_probs=124.9
Q ss_pred CccccEEEEEECcCCCEEE----EEeCCCCEEEEecccCC-----C-Cc-eeeEEEecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 18 GHKKKVHSVAWNCTGTKLA----SGSVDQTARVWHIEPHG-----H-GK-VKDIELRGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~----s~~~D~~v~vW~~~~~~-----~-~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
.|.+.|++++|+|++++|+ ||+.|++|+|||+.... . .. .....+.+|...|.+++|+|+++.+|++|+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4678899999999999999 89999999999986531 0 11 112345679999999999998778999999
Q ss_pred CCCeEEEEECCCCeeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec--------CceeeEEEE
Q 026765 87 GDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF--------GYEVNEIAW 157 (233)
Q Consensus 87 ~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~~~~~~ 157 (233)
.|++|++||++++....... ....+.+++|+|+|++|++|+.|+.|++||++ .+....... ...+.++.|
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEE
Confidence 99999999999886544333 24567889999999999999999999999998 333222211 127889999
Q ss_pred CCCCCEEEEE-eCCC------eEEEEecCCc
Q 026765 158 NMTGEMFFLT-TGNG------TVEVLTYPSL 181 (233)
Q Consensus 158 ~~~~~~~~~~-~~~~------~v~~~~~~~~ 181 (233)
++++.++++. ..+| .+++|+++..
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9988776554 3343 3889998643
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3e-20 Score=145.69 Aligned_cols=197 Identities=12% Similarity=0.152 Sum_probs=137.0
Q ss_pred cEEEEEECcCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-C
Q 026765 22 KVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-G 99 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~-~ 99 (233)
.+..++|+|++++|++++. |+.|.+|++.. .........+. ....+.+++|+|++..+++++..++.|.+||+.+ +
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLED-GLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEET-TEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCC-Ccccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 7889999999998877665 88999999851 11111111222 3346888999998755544444899999999987 5
Q ss_pred eeee----eeee--cCCeeEEEECCCCCeEEEE-cCCCcEEEEEcCC--Cee--eeeee---cC----ceeeEEEECCCC
Q 026765 100 KCSQ----QAEL--SGENINITYKPDGTHIAVG-NRDDELTILDVRK--FKP--IHRRK---FG----YEVNEIAWNMTG 161 (233)
Q Consensus 100 ~~~~----~~~~--~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~--~~~--~~~~~---~~----~~~~~~~~~~~~ 161 (233)
+... .... ...+..++|+|++++++++ ..++.+.+||+.. .+. ..... .. ..+..++|+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg 242 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 242 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence 4432 1121 2345679999999977655 4789999999853 221 11111 11 235579999999
Q ss_pred CEEEEEe-CCCeEEEEecC----CceeeeEEeeecCceeEEEECCCCCEEEEee-CCCcEEEEecC
Q 026765 162 EMFFLTT-GNGTVEVLTYP----SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDIS 221 (233)
Q Consensus 162 ~~~~~~~-~~~~v~~~~~~----~~~~~~~~~~~~~~v~~i~~~p~~~~las~s-~dg~v~iwd~~ 221 (233)
++++++. .++.+.+|+.. ..+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9887655 78999999997 3345555554444 88999999999888877 68999999554
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=6.9e-20 Score=144.41 Aligned_cols=205 Identities=17% Similarity=0.165 Sum_probs=155.4
Q ss_pred cccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcC---------cEEEEEEcCCCCCEEEEE-eCC
Q 026765 20 KKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---------SVDQLCWDPKHADLIATA-SGD 88 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~sg-~~d 88 (233)
...+..++|+|+|+++ ++...++.|.+||..... ... .+..+.. .+..++|+|++..+++++ +.+
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE--VKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC--EEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe--eEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 3457789999999965 455568999999986432 122 2322221 268899999876555555 358
Q ss_pred CeEEEEECCCCeeeeeee-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec-----CceeeEEEECCCCC
Q 026765 89 KTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-----GYEVNEIAWNMTGE 162 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 162 (233)
+.|.+||..+++...... .......++|+|++++++++..++.+.+||+.+.+....... ...+..++|+|+++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 899999999988777665 334466789999999999999999999999998887765543 23467799999999
Q ss_pred EEEEEeC-CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEee-CCCcEEEEecCCcEEEEeee
Q 026765 163 MFFLTTG-NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 163 ~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s-~dg~v~iwd~~~~~~i~~~~ 230 (233)
.+++++. ++.+.+||..+++.+..+.... ...++|+|++++++.++ .++.|.+||+.+++.+..+.
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 8777765 5999999998888777666433 36799999999665554 78999999999999887765
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=5.7e-20 Score=143.93 Aligned_cols=200 Identities=10% Similarity=0.088 Sum_probs=145.2
Q ss_pred EEECcCCCE-EEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCee-ee
Q 026765 26 VAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC-SQ 103 (233)
Q Consensus 26 ~~~~~~~~~-l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~-~~ 103 (233)
..|.+++++ +++++.+++|++||+.... . ...+..+...+ .++|+|++..+++++..++.|.+||+.+++. ..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~---~-~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE---I-LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC---E-EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc---e-eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEE
Confidence 346666655 6788889999999986432 2 12233445556 9999998765666666689999999998876 55
Q ss_pred eeeecCCeeE-EEECCCCCeEEEEcCCC---cEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE-eCCCe-EEEEe
Q 026765 104 QAELSGENIN-ITYKPDGTHIAVGNRDD---ELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGT-VEVLT 177 (233)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~~~ 177 (233)
.......... ++|+|++++++++..++ .+.+||+.+.+.+.....+.....++|+|+|++++++ ..++. +.+|+
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 5555555666 99999999999655553 8999999988887777666677899999999866655 55577 99999
Q ss_pred cCCceee----eEEeeecCceeEEEECCCCCEEE-EeeCCCcEEEEecCCcEE---EEeee
Q 026765 178 YPSLRPL----DTVVAHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISEMLC---VRTFT 230 (233)
Q Consensus 178 ~~~~~~~----~~~~~~~~~v~~i~~~p~~~~la-s~s~dg~v~iwd~~~~~~---i~~~~ 230 (233)
+.....+ .........+..++|+|+|++|+ ++..++.|++||+.+++. +.++.
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp ECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred ECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 8643222 12223445678999999999654 555689999999998877 66554
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=4.7e-21 Score=165.47 Aligned_cols=203 Identities=8% Similarity=0.055 Sum_probs=149.5
Q ss_pred cccEEEEEECcCCCEEEEEeC-CC-----CEEEEecccCCCCceeeEEEecCc------------------------CcE
Q 026765 20 KKKVHSVAWNCTGTKLASGSV-DQ-----TARVWHIEPHGHGKVKDIELRGHA------------------------DSV 69 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~-D~-----~v~vW~~~~~~~~~~~~~~~~~h~------------------------~~v 69 (233)
...|++++|+|||++|++++. |+ +|++||+.... .. ..+..+. ..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ---TR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC---EE-EEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc---ee-EccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 457999999999999999998 88 89999986432 11 1222222 237
Q ss_pred EEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee
Q 026765 70 DQLCWDPKHADLIATASGDKTVRLWDARSG---KCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR 146 (233)
Q Consensus 70 ~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 146 (233)
..++|+|++. .|++++. +.|.+||+.++ ..............++|+|||++|+.++ ++.|.+||+.+.+.....
T Consensus 112 ~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 112 VDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp CCCEECTTSS-EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC
T ss_pred ceeEECCCCC-EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec
Confidence 8899999865 5566665 99999999887 4433333335567899999999998877 458999999876654332
Q ss_pred ecCce-----------------eeEEEECCCCCEEEEEeCCC---------------------------------eEEEE
Q 026765 147 KFGYE-----------------VNEIAWNMTGEMFFLTTGNG---------------------------------TVEVL 176 (233)
Q Consensus 147 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~---------------------------------~v~~~ 176 (233)
..... +..+.|+|+|+.++.++.++ .+.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 22111 46799999999999887654 78888
Q ss_pred ecCC-ceeeeEEe--eecCceeEEEECCCCCEEEEeeC-----CCcEEEEecCCcEEEEeee
Q 026765 177 TYPS-LRPLDTVV--AHTAGCYCIAIDPMGRYFAVGSA-----DSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 177 ~~~~-~~~~~~~~--~~~~~v~~i~~~p~~~~las~s~-----dg~v~iwd~~~~~~i~~~~ 230 (233)
|..+ ++...... .|...+..++| |+|++|+.++. +..|++||+.++++.+.+.
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 8877 65443322 36678899999 99999987664 5789999999988776654
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=2.1e-20 Score=157.45 Aligned_cols=202 Identities=10% Similarity=-0.007 Sum_probs=145.3
Q ss_pred ccccEEEEEECcCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEecCc-CcEEEEEEcCCCCCEEEEEeC---CCeEEE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASG---DKTVRL 93 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~sg~~---d~~i~i 93 (233)
+..+|++++|+|||++||+++. |++++||+++.. . ...+..|. ..+..++|+|+ +++++++. +...++
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g---~--~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG---E--TVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT---E--EEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC---C--cEeeecccccccccccCCCC--eEEEEeccCCCCcceEE
Confidence 3668999999999999999887 999999998431 1 22445555 58999999987 57777765 556677
Q ss_pred EECCC--CeeeeeeeecCCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCC
Q 026765 94 WDARS--GKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 94 wd~~~--~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
|.+.. ................+|+|+++.+ ++...++.+.+||+.+.+......... ..+.|+|+|+.++.++.+
T Consensus 93 ~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 93 FKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred EEEeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEc
Confidence 65543 2111222222223356788888643 333444556699998776544333222 788999999999977765
Q ss_pred ----CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCC--cEEEEecCCcEEEEeeec
Q 026765 171 ----GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS--LVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 171 ----~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg--~v~iwd~~~~~~i~~~~~ 231 (233)
+.+++||..+++. ..+..|...+..++|+|||++|+++..++ .|++||++.+++. .+..
T Consensus 171 ~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~ 235 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL 235 (582)
T ss_dssp ETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred CCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence 7899999877664 36777888899999999999999888888 8999999988776 4443
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1.8e-19 Score=140.99 Aligned_cols=190 Identities=12% Similarity=0.137 Sum_probs=144.9
Q ss_pred CEEEEEeCCCCEEEEecccCCCCceeeEEEe-cCcC-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeecC-
Q 026765 33 TKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHAD-SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG- 109 (233)
Q Consensus 33 ~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~- 109 (233)
+++++++.|++|++||+.... ... .+. ++.. .+..++|+|++..+++++..++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~--~~~--~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA--VDK--VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE--EEE--EEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCc--EEE--EEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 478999999999999986421 122 222 2222 477899999876677777888999999999888766555433
Q ss_pred -----CeeEEEECCCCCeEEEEc------------CCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCe
Q 026765 110 -----ENINITYKPDGTHIAVGN------------RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGT 172 (233)
Q Consensus 110 -----~~~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (233)
.+..++|+|++++++++. .++.+.+||+.+.+.......+..+..+.|+|++++++++ ++.
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSS
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCe
Confidence 456799999999988875 5789999999888777666666678889999999988887 678
Q ss_pred EEEEecCCceeeeEEee---------------------------------------------------------------
Q 026765 173 VEVLTYPSLRPLDTVVA--------------------------------------------------------------- 189 (233)
Q Consensus 173 v~~~~~~~~~~~~~~~~--------------------------------------------------------------- 189 (233)
+.+||..+++....+..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 99999876655433221
Q ss_pred ---ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 190 ---HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 190 ---~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+...+.+++|+|++++++++ ++.|.+||+.+++.++.+.
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec
Confidence 12234568999999999888 7999999999998887764
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=6.7e-21 Score=164.00 Aligned_cols=203 Identities=10% Similarity=0.071 Sum_probs=147.7
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC---cEEEEEEcCCCCCEEEEEeCC---------
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQLCWDPKHADLIATASGD--------- 88 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~sg~~d--------- 88 (233)
..+.+++|+|+|+++++ +.|++|++||+..... ...+.+|.. .|.+++|+|++ +.|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EEEeccccccccccceEEECCCC-CEEEEEecCccceeecce
Confidence 34678999999998876 7899999999975321 223455554 48999999986 456677654
Q ss_pred CeEEEEECCCCeeeeeeeecC---CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC-c--------------
Q 026765 89 KTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-Y-------------- 150 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~-------------- 150 (233)
+.+.+||+.+++......... .+..++|+|||++|+.++. +.|.+||+.+.+.......+ .
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 788899999887522211111 2456899999999998876 68999999876554332221 1
Q ss_pred ----eeeEEEECCCCCEEEEEeCCC----------------------------------eEEEEecCCceeeeEEeee--
Q 026765 151 ----EVNEIAWNMTGEMFFLTTGNG----------------------------------TVEVLTYPSLRPLDTVVAH-- 190 (233)
Q Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~----------------------------------~v~~~~~~~~~~~~~~~~~-- 190 (233)
.+..+.|+|+|+.++.++.++ .+.+||..+.+....+..+
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 126799999999998876442 7889998877654555543
Q ss_pred ----cCceeEEEECCCCCEEEEeeC----CCcEEEEecCCcEEEEeee
Q 026765 191 ----TAGCYCIAIDPMGRYFAVGSA----DSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 191 ----~~~v~~i~~~p~~~~las~s~----dg~v~iwd~~~~~~i~~~~ 230 (233)
...+..++|+|||++|++.+. +..|++||+.++++.+.+.
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 297 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE
Confidence 557889999999999877653 3679999999988776553
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.9e-19 Score=141.57 Aligned_cols=199 Identities=9% Similarity=0.068 Sum_probs=143.8
Q ss_pred cEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecC-----cCcEEEEEEcCCCCCEEEEEeCC-------
Q 026765 22 KVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGH-----ADSVDQLCWDPKHADLIATASGD------- 88 (233)
Q Consensus 22 ~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~sg~~d------- 88 (233)
.+..++|+|+++++ +++..++.|.+||+.... ....... ++ ...+..++|+|++. .+++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--~~~~~~~-~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--NTFHANL-SSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEES-CCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--EEEEEEc-ccccccccccccceEECCCCC-EEEEEcccccccccc
Confidence 57899999999865 555678999999986421 1222222 12 23367889999865 55566644
Q ss_pred -----CeEEEEECCCCee---eeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc----------
Q 026765 89 -----KTVRLWDARSGKC---SQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY---------- 150 (233)
Q Consensus 89 -----~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------- 150 (233)
+.|.+||+.+++. .........+.+++|+|+++ +++++. .+.+||+.+.+.+.......
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPD 196 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred cccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCcc
Confidence 8999999987542 22333344566788999999 665543 49999987766544332211
Q ss_pred -----------------------------------------------------------eeeEEEECC-CCCEEEEEeCC
Q 026765 151 -----------------------------------------------------------EVNEIAWNM-TGEMFFLTTGN 170 (233)
Q Consensus 151 -----------------------------------------------------------~~~~~~~~~-~~~~~~~~~~~ 170 (233)
.+..+.++| ++++++++ +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~ 274 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L 274 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--c
Confidence 234566779 99988888 8
Q ss_pred CeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.+.+||..+++.+..+.. ...+.+++|+|++++|++++.++.|++||+++++.+++++
T Consensus 275 ~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 275 NRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp SEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 8999999998887776653 3457899999999998888889999999999999988875
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=2e-19 Score=141.43 Aligned_cols=197 Identities=9% Similarity=0.021 Sum_probs=144.1
Q ss_pred EEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCc-CcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeee
Q 026765 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 103 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~ 103 (233)
.+++++++.++++++.|++|++||+.... ... .+..+. ..+..++|+|++..+++++..++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~--~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--VYK--SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--EEE--EEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--EEE--EEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 45678888999999999999999986421 112 233222 2577899999876566777789999999999888766
Q ss_pred eeeecCC-------eeEEEECCCCCeEEEEcCC------------CcEEEEEcCCCe---eeeeeecCceeeEEEECCCC
Q 026765 104 QAELSGE-------NINITYKPDGTHIAVGNRD------------DELTILDVRKFK---PIHRRKFGYEVNEIAWNMTG 161 (233)
Q Consensus 104 ~~~~~~~-------~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~ 161 (233)
....... +..++|+|++++++++..+ +.+.+||+.+.+ .+........+.+++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 5554322 4578999999999988865 899999997733 22333334457888999999
Q ss_pred CEEEEEeCCCeEEEEecCCceeeeEEeeec--------------------------------------------------
Q 026765 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-------------------------------------------------- 191 (233)
Q Consensus 162 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------------------------------------------- 191 (233)
+ +++++ +.+.+||..+++....+..+.
T Consensus 160 ~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 55543 349999987776554443221
Q ss_pred ------------------CceeEEEECC-CCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 192 ------------------AGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 192 ------------------~~v~~i~~~p-~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..+..++++| ++++++++ ++.|.+||+.+++.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 1345677889 99998888 8899999999998887764
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=1.4e-18 Score=137.75 Aligned_cols=200 Identities=13% Similarity=0.183 Sum_probs=136.6
Q ss_pred ccccEEEEEECcCCCEEEEEeCC----CCEEEEecccCCCCceee-EEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVD----QTARVWHIEPHGHGKVKD-IELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D----~~v~vW~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~i 93 (233)
|......++|+|+|++|++++.+ +.|.+|+++... +.... .....+......+++ ++..++++...++.|.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~-g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK-GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT-TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC-CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 56677889999999999999886 799999987532 22221 233345556677777 44444444446889999
Q ss_pred EECCCCeeeee----eeec-----------CCeeEEEECCCCCeEEEEc-CCCcEEEEEcCCCee------e--------
Q 026765 94 WDARSGKCSQQ----AELS-----------GENINITYKPDGTHIAVGN-RDDELTILDVRKFKP------I-------- 143 (233)
Q Consensus 94 wd~~~~~~~~~----~~~~-----------~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~------~-------- 143 (233)
|++........ .... .....++|+|++++++++. .++.+.+|++..... +
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99975432211 1111 1125689999999776554 578999998864331 1
Q ss_pred eeeecCceeeEEEECCCCCEEEEEe-CCCeEEEEecCCcee--eeEEe---eecCceeEEEECCCCCEEEEeeC--CCcE
Q 026765 144 HRRKFGYEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSLRP--LDTVV---AHTAGCYCIAIDPMGRYFAVGSA--DSLV 215 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~--~~~~~---~~~~~v~~i~~~p~~~~las~s~--dg~v 215 (233)
.....+..+..++|+|+|+++++++ .++.+.+|+..+++. +..+. .+...+..++|+|+|++|+++.. ++.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1122344577899999999887777 689999999876543 22222 23345679999999999876665 4899
Q ss_pred EEEecC
Q 026765 216 SLWDIS 221 (233)
Q Consensus 216 ~iwd~~ 221 (233)
.+|+++
T Consensus 285 ~v~~~~ 290 (361)
T 3scy_A 285 AIFKVD 290 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999996
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=6.6e-19 Score=138.94 Aligned_cols=209 Identities=13% Similarity=0.197 Sum_probs=140.2
Q ss_pred CccccEEEEEECcCCCEEEEEeC---CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe-CCCeEEE
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS-GDKTVRL 93 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~---D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-~d~~i~i 93 (233)
.+......++|+|+|+ |++++. ++.|++|++..... .....+..+...+..++|+|++. .|++++ .++.|.+
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA--HKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEV 112 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE--EEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE--EEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEE
Confidence 4566778899999999 555544 68999999854211 11123345677888999999875 445555 7899999
Q ss_pred EECCC-Ceee--eeeeecC----------CeeEEEECCCCCeEEEEcCCCcEEEEEcC-CCeeee--eee--cCceeeEE
Q 026765 94 WDARS-GKCS--QQAELSG----------ENINITYKPDGTHIAVGNRDDELTILDVR-KFKPIH--RRK--FGYEVNEI 155 (233)
Q Consensus 94 wd~~~-~~~~--~~~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~--~~~--~~~~~~~~ 155 (233)
||+.. +... ......+ .+..++|+|+++.+++...++.+.+||+. ..+... ... .+..+..+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 99953 3322 2221111 24569999999966666678899999997 333221 111 23356789
Q ss_pred EECCCCCEEEE-EeCCCeEEEEecCC--cee--eeEEeeec------CceeEEEECCCCCEE-EEeeCCCcEEEEecC--
Q 026765 156 AWNMTGEMFFL-TTGNGTVEVLTYPS--LRP--LDTVVAHT------AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS-- 221 (233)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~--~~~~~~~~------~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~-- 221 (233)
+|+|+|+++++ ...++.+.+|++.. ++. ...+.... ..+..++|+|+|++| ++...++.|.+||+.
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99999996666 45688999998763 332 22222222 347889999999987 566678999999997
Q ss_pred -CcEEEEeee
Q 026765 222 -EMLCVRTFT 230 (233)
Q Consensus 222 -~~~~i~~~~ 230 (233)
....+..+.
T Consensus 273 g~~~~~~~~~ 282 (347)
T 3hfq_A 273 GHLTLIQQIS 282 (347)
T ss_dssp GCEEEEEEEE
T ss_pred CcEEEeEEEe
Confidence 334555543
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=1.9e-19 Score=137.93 Aligned_cols=194 Identities=15% Similarity=0.130 Sum_probs=140.8
Q ss_pred eeCc-cccEEEEEECcCCCEEEEEe--CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 16 YTGH-KKKVHSVAWNCTGTKLASGS--VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 16 ~~~H-~~~V~~~~~~~~~~~l~s~~--~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
+.+| ...|.+++|+|++++|++++ .|+.++||.++..... ...+..+ ..+..++|+|++..++++++.|+.++
T Consensus 79 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 79 DTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp CCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecC-CCccceEECCCCCEEEEEECCCCceE
Confidence 3444 47889999999999999999 4578888887643221 1233333 35888999999766666888999999
Q ss_pred EEECC--CCeeeeeeeecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcC-CCeeeeee-ecCceeeEEEECCCCCEEEEE
Q 026765 93 LWDAR--SGKCSQQAELSGENINITYKPDGTHIAVGN-RDDELTILDVR-KFKPIHRR-KFGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 93 iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 167 (233)
+|+++ ++..............++|+|++++++.++ .++.+.+|++. ........ .....+..+.|+|++++++.+
T Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 99853 344333233344567899999999888665 58889999875 23333222 234567889999999999888
Q ss_pred eCC-----------CeEEEEecCCcee--eeEEeeecCceeEEEECCCCCEEEEeeCCC
Q 026765 168 TGN-----------GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADS 213 (233)
Q Consensus 168 ~~~-----------~~v~~~~~~~~~~--~~~~~~~~~~v~~i~~~p~~~~las~s~dg 213 (233)
+.+ +.+.+|+..+.+. +..+.+|...+.+++|+|++++|++++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 765 5699999876644 444557888899999999999998887664
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=1.3e-19 Score=156.47 Aligned_cols=201 Identities=11% Similarity=0.132 Sum_probs=149.2
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCee
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~ 101 (233)
.|.+++|+|||++|++++. +.|++||+........ ..+..|...+..++|+|++. .|++++ ++.|.+||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~--~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV--RQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC--CBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE--EEcccCCcccccccCCCCCC-EEEEEe-CCcEEEEecCCCCE
Confidence 4889999999999999986 9999999875310011 13556778899999999864 566665 56899999988775
Q ss_pred eeeeeecCC-----------------eeEEEECCCCCeEEEEcCCC---------------------------------c
Q 026765 102 SQQAELSGE-----------------NINITYKPDGTHIAVGNRDD---------------------------------E 131 (233)
Q Consensus 102 ~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~d~---------------------------------~ 131 (233)
......... ...++|+|||++|+.++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 543322221 25689999999999887665 7
Q ss_pred EEEEEcCC-Ceeeeee---ecCceeeEEEECCCCCEEEEEeC-----CCeEEEEecCCceeeeEEeeecC----ceeEEE
Q 026765 132 LTILDVRK-FKPIHRR---KFGYEVNEIAWNMTGEMFFLTTG-----NGTVEVLTYPSLRPLDTVVAHTA----GCYCIA 198 (233)
Q Consensus 132 i~i~d~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~----~v~~i~ 198 (233)
|.+||+.+ .+..... .....+..++| |+|+.++.... +..+.+||..+++....+..+.. .+..++
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88899877 6543322 13456889999 99999987754 56899999988877666665553 346899
Q ss_pred ECCCCCEEEEeeCCCcEEEEecC-CcEEEEee
Q 026765 199 IDPMGRYFAVGSADSLVSLWDIS-EMLCVRTF 229 (233)
Q Consensus 199 ~~p~~~~las~s~dg~v~iwd~~-~~~~i~~~ 229 (233)
|+|+|+++++++.||.++||.++ ++. ++.+
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEES
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeee
Confidence 99999999999999988888775 343 4444
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=1.4e-19 Score=155.47 Aligned_cols=201 Identities=10% Similarity=0.061 Sum_probs=146.9
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-- 98 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~-- 98 (233)
..|++++|+|+ +.++.+ .|++|++||+... . ...+..+...+..++|+|++. .|++ ..|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~---~--~~~l~~~~~~~~~~~~SpdG~-~la~-~~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR---K--VTYLFDTNEETASLDFSPVGD-RVAY-VRNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT---E--EEEEECCTTCCTTCEECTTSS-EEEE-EETTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC---c--eEEccCCcccccCCcCCCCCC-EEEE-EECCeEEEEecCccc
Confidence 56999999999 665555 4699999998642 1 224456677788899999875 5555 3689999999988
Q ss_pred ---CeeeeeeeecCC---------------eeEEEECCCCCeEEEEc---------------------------------
Q 026765 99 ---GKCSQQAELSGE---------------NINITYKPDGTHIAVGN--------------------------------- 127 (233)
Q Consensus 99 ---~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~--------------------------------- 127 (233)
++.......... ...++|+|||++|++++
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 665443322222 35789999999999887
Q ss_pred CCCcEEEEEcCCCeeeeee---ecCceeeEEEECCCCCEEEEEeCCC-----eEEEEecCCceeeeEEe-ee-cC---ce
Q 026765 128 RDDELTILDVRKFKPIHRR---KFGYEVNEIAWNMTGEMFFLTTGNG-----TVEVLTYPSLRPLDTVV-AH-TA---GC 194 (233)
Q Consensus 128 ~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~-~~-~~---~v 194 (233)
.+..+.+||+.+.+..... .....+..++|+|+|+.+++++.++ .+.+||..+++....+. .+ .. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 3467999999877654332 2234688999999999999877665 89999998873333332 22 22 24
Q ss_pred eEEEECC--CCCEEEEeeCCCcEEEEecC-CcEEEEeee
Q 026765 195 YCIAIDP--MGRYFAVGSADSLVSLWDIS-EMLCVRTFT 230 (233)
Q Consensus 195 ~~i~~~p--~~~~las~s~dg~v~iwd~~-~~~~i~~~~ 230 (233)
.+++|+| +|+++++++.|+.++||+++ ++..++.+.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 6789999 99999999999999999886 566665553
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=1.5e-19 Score=152.28 Aligned_cols=203 Identities=10% Similarity=-0.003 Sum_probs=150.6
Q ss_pred eeeeCcc-ccEEEEEECcCCCEEEEEeC---CCCEEEEeccc--CCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC
Q 026765 14 REYTGHK-KKVHSVAWNCTGTKLASGSV---DQTARVWHIEP--HGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (233)
Q Consensus 14 ~~~~~H~-~~V~~~~~~~~~~~l~s~~~---D~~v~vW~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 87 (233)
+.+..|. ..|..++|+|+ +.+++++. +...++|.++. .+.. . .+... ..+...+|+|++..++++.+.
T Consensus 57 ~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~--~--~l~~~-~~~~~~~~s~dg~~~~~~s~~ 130 (582)
T 3o4h_A 57 VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE--Q--RLEAV-KPMRILSGVDTGEAVVFTGAT 130 (582)
T ss_dssp EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC--E--ECTTS-CSBEEEEEEECSSCEEEEEEC
T ss_pred EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc--c--cccCC-CCceeeeeCCCCCeEEEEecC
Confidence 3445555 68999999999 77887775 66778887764 2221 1 22222 234456888887665555555
Q ss_pred CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCC----CcEEEEEcCCCeeeeeeecCceeeEEEECCCCCE
Q 026765 88 DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD----DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEM 163 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (233)
++.+.+||+.+++......... ..++|+|||++++.++.+ ..|.+||+.+.+..........+...+|+|||+.
T Consensus 131 ~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 131 EDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp SSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCE
T ss_pred CCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCE
Confidence 5556699999887655443333 778999999999987766 6799999887665543344456789999999999
Q ss_pred EEEEeCCC--eEEEEecCCceeeeEEeeecCceeEEE--------ECCCCCEEEEeeCCCcEEEEecCCcEEEE
Q 026765 164 FFLTTGNG--TVEVLTYPSLRPLDTVVAHTAGCYCIA--------IDPMGRYFAVGSADSLVSLWDISEMLCVR 227 (233)
Q Consensus 164 ~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~i~--------~~p~~~~las~s~dg~v~iwd~~~~~~i~ 227 (233)
++.+..++ .+.+||..+++.. .+..|...+..++ |+|+|.++++++.|+.++||++ +++++
T Consensus 209 l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 209 TAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp EEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred EEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 99888888 8999999887776 6667777777777 9999988999999999999999 66553
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.5e-17 Score=131.82 Aligned_cols=207 Identities=12% Similarity=0.167 Sum_probs=139.3
Q ss_pred CccccEEEEEECcCCCEEEEEe-CCCCEEEEecccCCCC-ceee-EEEec--------CcCcEEEEEEcCCCCCEEEEEe
Q 026765 18 GHKKKVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHG-KVKD-IELRG--------HADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~-~~~~-~~~~~--------h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
.+......+++ ++++|++++ .+++|.+|++...... .... ....+ +...+.+++|+|++..+++++.
T Consensus 97 ~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 174 (361)
T 3scy_A 97 TMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL 174 (361)
T ss_dssp CSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET
T ss_pred cCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC
Confidence 34556677777 788877776 5889999998643211 1111 11111 1234688999998765666666
Q ss_pred CCCeEEEEECCCCee-------e-----ee--eeecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcCCCeee--eeeec-
Q 026765 87 GDKTVRLWDARSGKC-------S-----QQ--AELSGENINITYKPDGTHIAVGN-RDDELTILDVRKFKPI--HRRKF- 148 (233)
Q Consensus 87 ~d~~i~iwd~~~~~~-------~-----~~--~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~--~~~~~- 148 (233)
.++.|.+|++..... . .. .........++|+|++++++++. .++.+.+||+.+.+.. .....
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 789999998875431 1 11 11233456799999999887766 6889999998765432 21211
Q ss_pred ---CceeeEEEECCCCCEEEEEeC--CCeEEEEecC--Cce--eeeEEeeecCceeEEEECCCCCEEEEee-CCCcEEEE
Q 026765 149 ---GYEVNEIAWNMTGEMFFLTTG--NGTVEVLTYP--SLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLW 218 (233)
Q Consensus 149 ---~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~--~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s-~dg~v~iw 218 (233)
......++|+|+|++++++.. ++.+.+|+.. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 123568999999999877665 4899999985 333 3444444 55678999999999988887 67899996
Q ss_pred e--cCCcEEEE
Q 026765 219 D--ISEMLCVR 227 (233)
Q Consensus 219 d--~~~~~~i~ 227 (233)
+ .++++...
T Consensus 334 ~~d~~~g~~~~ 344 (361)
T 3scy_A 334 ERDQATGLLTD 344 (361)
T ss_dssp EECTTTCCEEE
T ss_pred EEECCCCcEee
Confidence 5 45665543
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=6.1e-19 Score=157.72 Aligned_cols=204 Identities=12% Similarity=0.065 Sum_probs=154.9
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEec-----------CcCcEEEEEEc-CCCCCEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG-----------HADSVDQLCWD-PKHADLI 82 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~-----------h~~~v~~~~~~-~~~~~~l 82 (233)
.+..|. .+..++|+|+|++|+++. |+.|.+|++.. ..+. .+.+ |...+..++|+ |++.. |
T Consensus 240 ~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~---~~l~--~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~-l 311 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDT---EKIE--KIEIGDLESPEDRIISIPSKFAEDFSPLDGDL-I 311 (1045)
T ss_dssp ECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTT---CCEE--ECCCCCCCBCCSEEEECGGGGEEEEEECGGGC-E
T ss_pred EecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCc---eEee--eeccCcccccccccccccccceeeecCCCCCE-E
Confidence 444454 466789999999999884 89999999832 1121 2333 44578999999 98754 4
Q ss_pred EEEeCCCeEEEEECCCCeeeeeeeecC-CeeEEEECCCCCeEEEEcCCCcEE-EEEcCCCeeeeeeecCceeeEEEECCC
Q 026765 83 ATASGDKTVRLWDARSGKCSQQAELSG-ENINITYKPDGTHIAVGNRDDELT-ILDVRKFKPIHRRKFGYEVNEIAWNMT 160 (233)
Q Consensus 83 ~sg~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (233)
++++ ++.+.+|++..+.......... ....++|+ +++.++.++.+..+. +||+...+..........+..++|+|+
T Consensus 312 a~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpD 389 (1045)
T 1k32_A 312 AFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRN 389 (1045)
T ss_dssp EEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTT
T ss_pred EEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCC
Confidence 5555 7899999998776543222233 45568899 999999888887888 889876554332233356889999999
Q ss_pred CCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCC----------cEEEEecCCcEEEEee
Q 026765 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS----------LVSLWDISEMLCVRTF 229 (233)
Q Consensus 161 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg----------~v~iwd~~~~~~i~~~ 229 (233)
|+.++.++.++.+++||..+++....+.+|...+.+++|+|+|++|++++.++ .|++||+..++ ++.+
T Consensus 390 G~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l 467 (1045)
T 1k32_A 390 GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAA 467 (1045)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEEC
T ss_pred CCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEe
Confidence 99999999999999999998887766668888899999999999999887654 89999999887 4443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.2e-18 Score=155.93 Aligned_cols=196 Identities=13% Similarity=0.078 Sum_probs=156.5
Q ss_pred ccccEEEEEEC-cCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC-cEEEEEEcCCCCCEEEEEeCCCeEE-EEE
Q 026765 19 HKKKVHSVAWN-CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD-SVDQLCWDPKHADLIATASGDKTVR-LWD 95 (233)
Q Consensus 19 H~~~V~~~~~~-~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sg~~d~~i~-iwd 95 (233)
|.+.+.+++|+ |+|++|++++ ++.|.+|++... . ...+..|.. .+..++|+ ++ ..|++++.+..+. +||
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~---~--~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d 365 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT---Y--VLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYD 365 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS---B--EEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC---c--eEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEE
Confidence 56679999999 9999999988 889999987532 1 223556777 89999999 65 5566777788888 999
Q ss_pred CCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-ecCceeeEEEECCCCCEEEEEeCCC---
Q 026765 96 ARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNG--- 171 (233)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 171 (233)
+..++.............++|+|||++|++++.++.+.+||+.+.+..... .+...+..++|+|+|++++.++.++
T Consensus 366 ~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 366 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp TTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSST
T ss_pred CCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccc
Confidence 987765433322245667999999999999999999999999887665544 3445678899999999998886644
Q ss_pred -------eEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 172 -------TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 172 -------~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
.+++||..+++ ...+..|...+.+++|+|+|++|+.++.++..++|+....
T Consensus 446 ~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred ccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 89999998876 5667778888999999999999999999999999987544
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=154.97 Aligned_cols=198 Identities=14% Similarity=0.150 Sum_probs=138.7
Q ss_pred EEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC---cEEEEEEcCCCCCEEEEEeC---------CCeEE
Q 026765 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQLCWDPKHADLIATASG---------DKTVR 92 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~sg~~---------d~~i~ 92 (233)
.++|+|+|+++++ +.|++|++||+.... ....+.+|.. .+.+++|+|++. .|++++. ++.|+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEE
Confidence 7899999965555 469999999986532 1222333433 388999999865 5566655 78999
Q ss_pred EEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc-------------------eee
Q 026765 93 LWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY-------------------EVN 153 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~~~ 153 (233)
+||+.+++.............++|+|||+.|+.+. ++.|.+||+.+.+.......+. ...
T Consensus 94 ~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 94 IYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp EEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred EEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 99999887632122334566799999999999875 7799999997765432221111 114
Q ss_pred EEEECCCCCEEEEEeCCC----------------------------------eEEEEecCCceee--------eEEeeec
Q 026765 154 EIAWNMTGEMFFLTTGNG----------------------------------TVEVLTYPSLRPL--------DTVVAHT 191 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~----------------------------------~v~~~~~~~~~~~--------~~~~~~~ 191 (233)
.+.|+|||+.++.++.+. .+.+||..+++.. ..+.+|.
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 799999999999877542 7788998776542 1123467
Q ss_pred CceeEEEECCCCCEEEEeeCC----CcEEEEe----cCCcEEEEee
Q 026765 192 AGCYCIAIDPMGRYFAVGSAD----SLVSLWD----ISEMLCVRTF 229 (233)
Q Consensus 192 ~~v~~i~~~p~~~~las~s~d----g~v~iwd----~~~~~~i~~~ 229 (233)
..+..++|+||++++++.... ..|.+|| +.++++.+.+
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 778999999998877775432 3488999 8777765544
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=2e-18 Score=148.54 Aligned_cols=202 Identities=10% Similarity=0.008 Sum_probs=139.8
Q ss_pred eeeeCccc---cEEEEEECcCCCEEEEEeCC---------CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCE
Q 026765 14 REYTGHKK---KVHSVAWNCTGTKLASGSVD---------QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADL 81 (233)
Q Consensus 14 ~~~~~H~~---~V~~~~~~~~~~~l~s~~~D---------~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 81 (233)
..+.+|.. .|.+++|||||++|++++.| +.+.+||+..... .......+|...+..++|+|++. .
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~-~ 127 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQ-Q 127 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSSTT-C
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccccccEECCCCC-E
Confidence 34455554 49999999999999999875 6778999875321 11111123445588899999875 4
Q ss_pred EEEEeCCCeEEEEECCCCeeeeeeeecC-C------------------eeEEEECCCCCeEEEEcCCC------------
Q 026765 82 IATASGDKTVRLWDARSGKCSQQAELSG-E------------------NINITYKPDGTHIAVGNRDD------------ 130 (233)
Q Consensus 82 l~sg~~d~~i~iwd~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~l~~~~~d~------------ 130 (233)
|++++. +.|.+||+.+++......... . ...++|+|||++|+.++.++
T Consensus 128 la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 128 LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp EEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC
Confidence 556654 799999998876554333211 1 15699999999999877543
Q ss_pred ----------------------cEEEEEcCCCeeeeeeec-------CceeeEEEECCCCCEEEEEeC----CCeEEEEe
Q 026765 131 ----------------------ELTILDVRKFKPIHRRKF-------GYEVNEIAWNMTGEMFFLTTG----NGTVEVLT 177 (233)
Q Consensus 131 ----------------------~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~ 177 (233)
.+.+||+.+.+....... ...+..++|+|+|++++.... +..+.+||
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 688999877654333221 346788999999998866643 35788999
Q ss_pred cCCceeeeEEeee-cCcee----EEEECCCCCEEEE--eeCCC------cEEEEe
Q 026765 178 YPSLRPLDTVVAH-TAGCY----CIAIDPMGRYFAV--GSADS------LVSLWD 219 (233)
Q Consensus 178 ~~~~~~~~~~~~~-~~~v~----~i~~~p~~~~las--~s~dg------~v~iwd 219 (233)
..+++....+..+ ...+. .++|+|+|+.|+. +..|+ .|.+||
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 8887766555443 33333 7899999997775 45677 577777
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=2.1e-18 Score=148.24 Aligned_cols=192 Identities=14% Similarity=0.099 Sum_probs=138.9
Q ss_pred EEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCc-----------------CcEEEEEEcCCCCCEEEEE
Q 026765 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-----------------DSVDQLCWDPKHADLIATA 85 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~l~sg 85 (233)
+..+.|. |+.+++++.|+ | +||+.+.... .. .+..|. ..|.+++|+|+ +.++++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~-~~--~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~- 98 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSA-QT--TRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF- 98 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC--------C--EEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEe-eE--EeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-
Confidence 4557887 77888888888 8 9998753320 01 112222 46999999998 555544
Q ss_pred eCCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCC-----CeeeeeeecCce---------
Q 026765 86 SGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-----FKPIHRRKFGYE--------- 151 (233)
Q Consensus 86 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~--------- 151 (233)
.++.|++||+.+++.............++|+|||++|+.+ .++.|.+||+.+ .+..........
T Consensus 99 -~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 99 -TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp -ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred -ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 4599999999988765544444556678999999999885 678999999987 554432222222
Q ss_pred ------eeEEEECCCCCEEEEEe---------------------------------CCCeEEEEecCCceeeeEEe--ee
Q 026765 152 ------VNEIAWNMTGEMFFLTT---------------------------------GNGTVEVLTYPSLRPLDTVV--AH 190 (233)
Q Consensus 152 ------~~~~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~~~~~~~~~~~--~~ 190 (233)
+..+.|+|+|++++.++ .+..+.+||..+++...... .|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 47899999999999887 45789999998776543332 45
Q ss_pred cCceeEEEECCCCCEEEEeeCCC-----cEEEEecCCcEE
Q 026765 191 TAGCYCIAIDPMGRYFAVGSADS-----LVSLWDISEMLC 225 (233)
Q Consensus 191 ~~~v~~i~~~p~~~~las~s~dg-----~v~iwd~~~~~~ 225 (233)
...+.+++|+|+|++|++++.|+ .|++||+.+++.
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~ 296 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF 296 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence 67789999999999999988776 899999998833
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=3.3e-17 Score=130.38 Aligned_cols=204 Identities=7% Similarity=0.053 Sum_probs=138.1
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCcee-eEEEecCcCcEEEEEEcCCCCC-EEEEEe----------
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHAD-LIATAS---------- 86 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~-~l~sg~---------- 86 (233)
+...+..++|+|+|++|++++.+ .|.+|++.... ... ......+ .....++|+|++.. ++++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g--~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT--EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT--EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC--CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 33467889999999999999988 99999986211 221 1122211 22445789998754 345553
Q ss_pred ---CCCeEEEEECC-CCeeeeeee-----ecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcC-CCeee--eeee---cCc
Q 026765 87 ---GDKTVRLWDAR-SGKCSQQAE-----LSGENINITYKPDGTHIAVGN-RDDELTILDVR-KFKPI--HRRK---FGY 150 (233)
Q Consensus 87 ---~d~~i~iwd~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~--~~~~---~~~ 150 (233)
.++.+.+|++. .++...... ....+..++|+|+|++++++. .++.|.+||+. +.+.. .... .+.
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 68999999997 355433322 123566799999999888765 46789999997 55432 2222 144
Q ss_pred eeeEEEECCCCCEEEEEeC-CCeEEEEecC--Cceee---eEEe-------eecC------ceeEEE-ECCCCCEEEEee
Q 026765 151 EVNEIAWNMTGEMFFLTTG-NGTVEVLTYP--SLRPL---DTVV-------AHTA------GCYCIA-IDPMGRYFAVGS 210 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~---~~~~-------~~~~------~v~~i~-~~p~~~~las~s 210 (233)
.+..++|+|+|++++++.. ++.+.+|+.+ +++.. ..+. +|.. .+..++ |+|+|++|++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 5888999999999888765 6899999765 34332 1121 1222 478899 999999987766
Q ss_pred CCC------cEEEEecC-CcEEE
Q 026765 211 ADS------LVSLWDIS-EMLCV 226 (233)
Q Consensus 211 ~dg------~v~iwd~~-~~~~i 226 (233)
.+. .|.+|+++ +++..
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEE
T ss_pred CCCCCCCCCeEEEEEECCCCCEE
Confidence 432 89999996 56543
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=4.3e-17 Score=129.68 Aligned_cols=200 Identities=11% Similarity=0.167 Sum_probs=135.0
Q ss_pred EEEEEECcCCCE--EEEEe-------------CCCCEEEEecccCCCCceeeEEEe--cCcCcEEEEEEcCCCCCEEEEE
Q 026765 23 VHSVAWNCTGTK--LASGS-------------VDQTARVWHIEPHGHGKVKDIELR--GHADSVDQLCWDPKHADLIATA 85 (233)
Q Consensus 23 V~~~~~~~~~~~--l~s~~-------------~D~~v~vW~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~sg 85 (233)
...++|+|+|++ +++++ .++++++|+++.... ........ .+...+..++|+|++..++++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 456889999994 55664 689999999864221 11111111 2456789999999875444343
Q ss_pred eCCCeEEEEECC-CCeeee--eeee---cCCeeEEEECCCCCeEEEEcC-CCcEEEEEcC--CCeee---eeee---cC-
Q 026765 86 SGDKTVRLWDAR-SGKCSQ--QAEL---SGENINITYKPDGTHIAVGNR-DDELTILDVR--KFKPI---HRRK---FG- 149 (233)
Q Consensus 86 ~~d~~i~iwd~~-~~~~~~--~~~~---~~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~---~~~~---~~- 149 (233)
..++.|.+||+. +++... .... ...+..++|+|+|++++++.. ++.+.+|++. +.+.. .... .+
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 457899999998 665432 2221 234667999999999887765 6789999764 33321 1111 11
Q ss_pred ---c-------eeeEEE-ECCCCCEEEEEeCC-C-----eEEEEecC-Cceeee---EEeeecCceeEEEECC---CCCE
Q 026765 150 ---Y-------EVNEIA-WNMTGEMFFLTTGN-G-----TVEVLTYP-SLRPLD---TVVAHTAGCYCIAIDP---MGRY 205 (233)
Q Consensus 150 ---~-------~~~~~~-~~~~~~~~~~~~~~-~-----~v~~~~~~-~~~~~~---~~~~~~~~v~~i~~~p---~~~~ 205 (233)
. .+..++ |+|+|++++++..+ + .+.+|+.. +++... .+..+...+..++|+| +|++
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW 323 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE
Confidence 1 477899 99999998776543 2 89999985 444332 1223455677899999 8999
Q ss_pred EEEeeCC-CcEEEEecCCc
Q 026765 206 FAVGSAD-SLVSLWDISEM 223 (233)
Q Consensus 206 las~s~d-g~v~iwd~~~~ 223 (233)
|++++.+ +.|+||+++..
T Consensus 324 l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 324 MAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSSCEEEEEEEETT
T ss_pred EEEEEcCCCeEEEEEEchh
Confidence 9988865 89999998755
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=143.42 Aligned_cols=195 Identities=12% Similarity=0.116 Sum_probs=132.4
Q ss_pred EEEEEECcCCCEEEEEeC---------CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEE
Q 026765 23 VHSVAWNCTGTKLASGSV---------DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~---------D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~i 93 (233)
|.+++|||||++|++++. |++|++||+..... .....+ ...+..++|+|++.. |+++. ++.|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~--~~~~~l---~~~~~~~~~SPDG~~-la~~~-~~~i~~ 134 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF--VRGNEL---PRPIQYLCWSPVGSK-LAYVY-QNNIYL 134 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--CCSSCC---CSSBCCEEECSSTTC-EEEEE-TTEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc--ccceec---CcccccceECCCCCE-EEEEE-CCeEEE
Confidence 899999999999999876 79999999864321 000111 246888999999765 55554 789999
Q ss_pred EECCCCeeeeeeeecC-------------------CeeEEEECCCCCeEEEEcCCC------------------------
Q 026765 94 WDARSGKCSQQAELSG-------------------ENINITYKPDGTHIAVGNRDD------------------------ 130 (233)
Q Consensus 94 wd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~~~d~------------------------ 130 (233)
||+.+++..+...... ....++|+|||++|+.++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 9998876543221111 113699999999999887552
Q ss_pred ----------cEEEEEcCCCeee--eee-------ecCceeeEEEECCCCCEEEEEeCC----CeEEEEe----cCCcee
Q 026765 131 ----------ELTILDVRKFKPI--HRR-------KFGYEVNEIAWNMTGEMFFLTTGN----GTVEVLT----YPSLRP 183 (233)
Q Consensus 131 ----------~i~i~d~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~----~~~~~~ 183 (233)
.+.+||+.+.+.. ... .....+..++|+|+++.++..... ..+.+|| ..+++.
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred CCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 6789998775532 011 123457899999998766664322 2477888 666665
Q ss_pred eeEE----eeecCcee-----EEEECCCCCEEEE--eeCCC--cEEEEecCCcE
Q 026765 184 LDTV----VAHTAGCY-----CIAIDPMGRYFAV--GSADS--LVSLWDISEML 224 (233)
Q Consensus 184 ~~~~----~~~~~~v~-----~i~~~p~~~~las--~s~dg--~v~iwd~~~~~ 224 (233)
...+ ..|...+. .++|+|+|+.|+. ...+| .|.+||+..++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 295 PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 5444 35666666 7899999996554 44555 46777776554
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.2e-16 Score=136.29 Aligned_cols=210 Identities=8% Similarity=-0.040 Sum_probs=143.9
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEE--eCCCCEEEEecccCCCCceeeEEEecCcCcEE---------EEEEc--CCCC
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASG--SVDQTARVWHIEPHGHGKVKDIELRGHADSVD---------QLCWD--PKHA 79 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~--~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~ 79 (233)
.+.+.+|...|..++|++++-.+++. +.|+..+||..... +. ..++..|...+. ...|+ |++.
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--GA--EESALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--SC--EEESSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--CC--cceeCCCCccccccccccCCccceeeeecCCC
Confidence 35677899999999999887777777 56889999987322 22 224555555544 55565 8887
Q ss_pred C-EEEEEeCCCeEEEEECC--C-Ceeeeeeee------cCCeeEEEECCCCCeEEEEcCC----------CcEEEEEcCC
Q 026765 80 D-LIATASGDKTVRLWDAR--S-GKCSQQAEL------SGENINITYKPDGTHIAVGNRD----------DELTILDVRK 139 (233)
Q Consensus 80 ~-~l~sg~~d~~i~iwd~~--~-~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~ 139 (233)
. ++++...+..|.++++. . +.. ..+.. ......++|+|||+.|+.++.+ ..|.+||+.+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 6 55554446677777775 2 432 22222 1234568999999999988876 5789999877
Q ss_pred ------Ceeeeee-ecCceeeEEEECCCCCEEEEEeCC--------CeEEEEecC-Cc--eeeeEEe-eecCceeEEEEC
Q 026765 140 ------FKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGN--------GTVEVLTYP-SL--RPLDTVV-AHTAGCYCIAID 200 (233)
Q Consensus 140 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~-~~--~~~~~~~-~~~~~v~~i~~~ 200 (233)
.+..... .....+..+.|+|||+.++..+.+ ..+.+|+.. ++ .....+. .|...+..++|+
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 4433222 223456778999999999877644 479999998 45 1333444 446788999999
Q ss_pred CCCCEEEEeeCCC--cEEEEecCCcEEEE
Q 026765 201 PMGRYFAVGSADS--LVSLWDISEMLCVR 227 (233)
Q Consensus 201 p~~~~las~s~dg--~v~iwd~~~~~~i~ 227 (233)
|+|+++++++.|+ .|.+||+..++..+
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEE
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceee
Confidence 9999888888888 56666665665443
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=6.3e-15 Score=113.03 Aligned_cols=204 Identities=13% Similarity=0.166 Sum_probs=147.1
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe------cCcCcEEEEEEcCCCCCEEEEEeC-CCe
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHADSVDQLCWDPKHADLIATASG-DKT 90 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~sg~~-d~~ 90 (233)
+|.....+++++++++++++...++.|++|+.+. .... .+. ++...+..+++.+.++.++++... ++.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g---~~~~--~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG---RFKF--QFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS---CEEE--EECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC---cEEE--EecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 5667899999999999999988999999998652 1111 221 244578899995334456665533 889
Q ss_pred EEEEECCCCeeeeeeeec--CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee---cCceeeEEEECCCCCEEE
Q 026765 91 VRLWDARSGKCSQQAELS--GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMFF 165 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 165 (233)
|.+|| .+++....+... ..+..++++|+++.+++...++.|.+||... +.+.... ....+..+++++++++++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 99999 455554444322 3456799999999888777888999999643 3333332 123578899999999888
Q ss_pred EEeCCCeEEEEecCCceeeeEEeee--cCceeEEEECCCCCEEEEeeCCC-cEEEEecCCcEEEEeee
Q 026765 166 LTTGNGTVEVLTYPSLRPLDTVVAH--TAGCYCIAIDPMGRYFAVGSADS-LVSLWDISEMLCVRTFT 230 (233)
Q Consensus 166 ~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~i~~~p~~~~las~s~dg-~v~iwd~~~~~~i~~~~ 230 (233)
+...++.+.+|+.. ++.+..+..+ ...+..++++|+|+++++...++ .|.+||.. +..++++.
T Consensus 180 ~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~ 245 (286)
T 1q7f_A 180 SDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALE 245 (286)
T ss_dssp EEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEE
T ss_pred EECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEc
Confidence 77889999999964 4455555433 25688999999999988888886 99999964 66666664
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=3.2e-17 Score=141.79 Aligned_cols=197 Identities=13% Similarity=0.135 Sum_probs=136.3
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCc-----EEEEEEcCCCCCEEEEEeCC------
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS-----VDQLCWDPKHADLIATASGD------ 88 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~sg~~d------ 88 (233)
......++|+|+|++++++ |++|++|++.... ....+.+|... ...++|+|++. .|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSS
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCc----eEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEE
Confidence 3446689999999999986 9999999987532 12235566532 23478999865 55666665
Q ss_pred ---CeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc---------------
Q 026765 89 ---KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY--------------- 150 (233)
Q Consensus 89 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------------- 150 (233)
+.+.+||+.+++..............+|+|||+.|+.+ .++.|.+||+.+.+.......+.
T Consensus 89 ~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 56679999998865533334556789999999999877 46789999987655332111111
Q ss_pred ----eeeEEEECCCCCEEEEEeCCC------------------------------------eEEEEecCC---ce--eee
Q 026765 151 ----EVNEIAWNMTGEMFFLTTGNG------------------------------------TVEVLTYPS---LR--PLD 185 (233)
Q Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~------------------------------------~v~~~~~~~---~~--~~~ 185 (233)
....+.|+|||+.++....|. .+.+||..+ ++ ...
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE
Confidence 113488999999998764221 477788776 52 222
Q ss_pred EEee------ecCceeEEEECCCCCEEEEeeC----CCcEEEEecCCcE
Q 026765 186 TVVA------HTAGCYCIAIDPMGRYFAVGSA----DSLVSLWDISEML 224 (233)
Q Consensus 186 ~~~~------~~~~v~~i~~~p~~~~las~s~----dg~v~iwd~~~~~ 224 (233)
.+.. |...+..++|+|+|+.++.... +..|.+||+.+++
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3332 6667889999999997665432 3479999998876
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=2.7e-15 Score=119.29 Aligned_cols=208 Identities=12% Similarity=0.120 Sum_probs=133.4
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEe----------CCCCEEEEecccCCCCceeeEEEec----CcCcEEEEEEcCCCC
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELRG----HADSVDQLCWDPKHA 79 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~----------~D~~v~vW~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~ 79 (233)
.++..+..+ .++|+|+|++++++. .|++|.+||+... ..+..+.+.. +......++++|++.
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--~~~~~i~~~~~~~~~g~~p~~i~~spdg~ 120 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--TFEKEISLPPKRVQGLNYDGLFRQTTDGK 120 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--CEEEEEEECTTBCCBCCCGGGEEECTTSS
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--cEEEEEEcCccccccCCCcceEEECCCCC
Confidence 345555555 899999999998886 3678999997632 2233333321 223456789999875
Q ss_pred CEEEEEe-C-CCeEEEEECCCCeeeee-eeecCCeeEEEECCCC-CeEEEEcCCC-------------------------
Q 026765 80 DLIATAS-G-DKTVRLWDARSGKCSQQ-AELSGENINITYKPDG-THIAVGNRDD------------------------- 130 (233)
Q Consensus 80 ~~l~sg~-~-d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~d~------------------------- 130 (233)
+|++++ . ++.|.+||+.+++.... ....+. ..+.+.|++ ..+++.+.|+
T Consensus 121 -~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~ 198 (361)
T 2oiz_A 121 -FIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV 198 (361)
T ss_dssp -EEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT
T ss_pred -EEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC
Confidence 555554 3 68999999998876655 332211 112223322 2222333333
Q ss_pred -----------------------cEEEEEcCCCee--eeeeec--------C---ceeeEEEECCCCCEEEEEeC-----
Q 026765 131 -----------------------ELTILDVRKFKP--IHRRKF--------G---YEVNEIAWNMTGEMFFLTTG----- 169 (233)
Q Consensus 131 -----------------------~i~i~d~~~~~~--~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~----- 169 (233)
.+.++|+..... ...... . .....++++++++.+++...
T Consensus 199 ~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 199 KDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp TTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred CCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 344444432111 000000 0 00112788999888777643
Q ss_pred ------CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc--EEEEeee
Q 026765 170 ------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM--LCVRTFT 230 (233)
Q Consensus 170 ------~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~--~~i~~~~ 230 (233)
.+.+.+||..+.+.+..+..+. +.+++|+|+|++|++++. +.|.|||++++ +.++++.
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~ 344 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE 344 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec
Confidence 3589999999999999988776 899999999999998887 99999999999 9998864
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=1.7e-15 Score=118.91 Aligned_cols=201 Identities=13% Similarity=0.136 Sum_probs=146.6
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEE---------ecCcCcEEEEEEcCCCCCEEEEEe-C
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL---------RGHADSVDQLCWDPKHADLIATAS-G 87 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~sg~-~ 87 (233)
++......++++|+|+++++...++.|++|+.+... ..+ ..+ .++......++++|+++.++++.+ .
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~--~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPL--LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCS--EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEE--EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 345578899999999999998889999999975321 011 122 234456889999995567877776 6
Q ss_pred CCeEEEEECCCCeeeeeeeecC-----------CeeEEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeeee---cCcee
Q 026765 88 DKTVRLWDARSGKCSQQAELSG-----------ENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRK---FGYEV 152 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~ 152 (233)
++.|++||. +++....+...+ .+..++++|+ +..+++...++.|.+||..+.+.+.... .+..+
T Consensus 165 ~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 899999994 555544443211 2567999998 6777777788999999998666655443 23456
Q ss_pred eEEEECC------CCCEEEEEeCCCeEEEEecCCceeeeEEe---eecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 153 NEIAWNM------TGEMFFLTTGNGTVEVLTYPSLRPLDTVV---AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 153 ~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
..++++| +++.+++...+..+.+|+..+++.+..+. ++...+..|+++|+|..+++...++.|++|++..
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 7788888 33333333345689999998888877763 5667789999999998889999999999999864
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=7.5e-15 Score=112.61 Aligned_cols=198 Identities=11% Similarity=0.119 Sum_probs=141.9
Q ss_pred CccccEEEEEE-CcCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEe-cCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 18 GHKKKVHSVAW-NCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELR-GHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 18 ~H~~~V~~~~~-~~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
+|...+..+++ .+++.++++... ++.|++|+.+. ... ..+. .+...+..++++|++ +++++...++.|.+|
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g----~~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~ 147 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG----QFV-RKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIF 147 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS----CEE-EEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC----cEE-EEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEE
Confidence 35567899999 577777777644 89999998431 111 1222 344578899999976 577777788999999
Q ss_pred ECCCCeeeeeeeec---CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC---ceeeEEEECCCCCEEEEEe
Q 026765 95 DARSGKCSQQAELS---GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG---YEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 95 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 168 (233)
|.. ++....+... ..+..++++|+++.+++...++.|.+||... +.+...... ..+..++++++|+++++..
T Consensus 148 ~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 148 DQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp CTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred cCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence 964 4444433221 2456799999998888878889999999754 333333221 3577899999999888887
Q ss_pred CCC-eEEEEecCCceeeeEEeeecC--ceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 169 GNG-TVEVLTYPSLRPLDTVVAHTA--GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 169 ~~~-~v~~~~~~~~~~~~~~~~~~~--~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
.++ .+.+|+. +++.+..+..+.. .+.+++++|+|+++++ +.|+.|++|++....+
T Consensus 226 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 226 HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred CCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 776 9999995 4566666665443 3679999999987777 6799999999876543
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.5e-15 Score=121.25 Aligned_cols=208 Identities=12% Similarity=0.057 Sum_probs=140.5
Q ss_pred cceeeeCccccEEE-----EEECcCCCEEEEEeC-CCC--EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEE
Q 026765 12 HSREYTGHKKKVHS-----VAWNCTGTKLASGSV-DQT--ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIA 83 (233)
Q Consensus 12 ~~~~~~~H~~~V~~-----~~~~~~~~~l~s~~~-D~~--v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 83 (233)
....+..|.+.+.. .+|+|||++|+.++. |+. |.+||+.. +... ....++...+..+.|+|++ +.|+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~---g~~~-~lt~~~~~~~~~~~~spdg-~~l~ 96 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT---QVAT-QLTEGRGDNTFGGFLSPDD-DALF 96 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT---CEEE-ECCCSSCBCSSSCEECTTS-SEEE
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC---CceE-EeeeCCCCCccceEEcCCC-CEEE
Confidence 34566777777776 899999999999887 776 55556542 1111 1233455555567899986 4667
Q ss_pred EEeCCCeEEEEECCCCeeeeeeeecCCee---EEEECCCCCeEEEE----------------------cCCCcEEEEEcC
Q 026765 84 TASGDKTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVG----------------------NRDDELTILDVR 138 (233)
Q Consensus 84 sg~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~----------------------~~d~~i~i~d~~ 138 (233)
.++.++.|.+||+.+++.......+.... ...++|+++.++.. ..+..|.+||+.
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 78888999999999887655544443322 23458999888742 234678999998
Q ss_pred CCeeeeeeecCceeeEEEECC-CCCEEEEEeCC------CeEEEEecCCceeeeEEeeec--CceeEEEECCCCCEEEEe
Q 026765 139 KFKPIHRRKFGYEVNEIAWNM-TGEMFFLTTGN------GTVEVLTYPSLRPLDTVVAHT--AGCYCIAIDPMGRYFAVG 209 (233)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~--~~v~~i~~~p~~~~las~ 209 (233)
+.+..........+..+.|+| +|+.++..... ..+.+++....+ ...+..+. ..+...+|+|+|+.|+..
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEE
Confidence 776554444445678899999 99988877653 367777765433 23333343 247788999999987665
Q ss_pred eC-CC----cEEEEecCCcEE
Q 026765 210 SA-DS----LVSLWDISEMLC 225 (233)
Q Consensus 210 s~-dg----~v~iwd~~~~~~ 225 (233)
+. ++ .|.+||+++++.
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCE
T ss_pred ecCCCCCcceEEEEecCCCce
Confidence 43 22 399999998764
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=4.6e-15 Score=116.40 Aligned_cols=206 Identities=11% Similarity=0.050 Sum_probs=147.3
Q ss_pred cccEEEEEECcCCCEEEEEeCC------------------------CCEEEEecccCCCCceeeEEEecCcCcEEEEEEc
Q 026765 20 KKKVHSVAWNCTGTKLASGSVD------------------------QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D------------------------~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 75 (233)
.+.+.+|+++|+|+++++.+.+ ++|.+||.... .+....-.++-.....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEEC
Confidence 5679999999999999998877 47899987532 22221112344578899999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCe-eeeeeee----------cCCeeEEEECC-CCCeEEEEc-CCCcEEEEEcCCCee
Q 026765 76 PKHADLIATASGDKTVRLWDARSGK-CSQQAEL----------SGENINITYKP-DGTHIAVGN-RDDELTILDVRKFKP 142 (233)
Q Consensus 76 ~~~~~~l~sg~~d~~i~iwd~~~~~-~~~~~~~----------~~~~~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~ 142 (233)
|++ +++++...++.|++||..... ....+.. -..+..++++| ++..+++.+ .++.|.+||. ..+.
T Consensus 100 ~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~ 177 (329)
T 3fvz_A 100 TDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF 177 (329)
T ss_dssp TTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE
T ss_pred CCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE
Confidence 876 488888889999999986542 2222211 11356799999 788877776 6899999994 3433
Q ss_pred eeeeec-C----------ceeeEEEECCC-CCEEEEEeCCCeEEEEecCCceeeeEEe--eecCceeEEEECC------C
Q 026765 143 IHRRKF-G----------YEVNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVV--AHTAGCYCIAIDP------M 202 (233)
Q Consensus 143 ~~~~~~-~----------~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~i~~~p------~ 202 (233)
+..... + ..+..++++++ ++++++...++.|++|+..+++.+..+. .+...+..++++| +
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 332211 1 12678999998 7777777889999999998787777764 3556788999999 3
Q ss_pred CCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 203 GRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 203 ~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
++.+++.+.+..|++||+.+++.+.+|.
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~ 285 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFK 285 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEEC
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEc
Confidence 3333334445689999999999998874
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=3.4e-14 Score=109.57 Aligned_cols=207 Identities=12% Similarity=0.070 Sum_probs=145.2
Q ss_pred ceeeeCccccEEEEEECcCCC-EEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE
Q 026765 13 SREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i 91 (233)
.+.+..+.....+++|+|+++ +++++..++.|.+|+.... . ..+..+...+..++++|++ .++++...++.|
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~--~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----L--SPEMHPSHHQNGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----E--EEEESSCSSEEEEEECTTC-CEEEEETTTTEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----e--EEEECCCCCcceeeECCCC-cEEEEecCCCeE
Confidence 355666777889999999998 7788888999999997642 2 2345566789999999975 577776667899
Q ss_pred EEEECCCCeeeeeeee-c----CCeeEEEECCCCCeEEE----Ec-------------CCCcEEEEEcCCCeeeeeeecC
Q 026765 92 RLWDARSGKCSQQAEL-S----GENINITYKPDGTHIAV----GN-------------RDDELTILDVRKFKPIHRRKFG 149 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~l~~----~~-------------~d~~i~i~d~~~~~~~~~~~~~ 149 (233)
.+||..+++....... . ..+..++++|+|+.+++ |. ..+.|..++.. .+........
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR 171 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC
Confidence 9999977765433221 1 12345899999998876 33 12456666654 2222222222
Q ss_pred ceeeEEEECCCCCEEEEEeCCCeEEEEecC-Ccee---eeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 150 YEVNEIAWNMTGEMFFLTTGNGTVEVLTYP-SLRP---LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
...+.++|+++++.+++...++.+.+|+.. +++. ...+..+...+..++++++|+++++. ++.|.+||.+ ++.
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 346789999999999666778999999986 3333 22232344556789999999877766 8889999987 777
Q ss_pred EEeee
Q 026765 226 VRTFT 230 (233)
Q Consensus 226 i~~~~ 230 (233)
+..+.
T Consensus 249 ~~~~~ 253 (296)
T 3e5z_A 249 LGRVL 253 (296)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76664
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=1.3e-15 Score=130.00 Aligned_cols=210 Identities=12% Similarity=0.016 Sum_probs=134.4
Q ss_pred eeeeCccccEE---------EEEEC--cCCCE-EEEEeCCCCEEEEecccC--CCCceeeEEEec-----CcCcEEEEEE
Q 026765 14 REYTGHKKKVH---------SVAWN--CTGTK-LASGSVDQTARVWHIEPH--GHGKVKDIELRG-----HADSVDQLCW 74 (233)
Q Consensus 14 ~~~~~H~~~V~---------~~~~~--~~~~~-l~s~~~D~~v~vW~~~~~--~~~~~~~~~~~~-----h~~~v~~~~~ 74 (233)
+.+..|...+. ...|+ |||++ |+.++. +..+||.++.. +.+. ...+.. |...+..++|
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-GDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT-TTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEE
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC-CCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEE
Confidence 45566666666 56665 99998 766553 24445544432 1011 123334 5667889999
Q ss_pred cCCCCCEEEEEeCC----------CeEEEEECCC------Ceeeeee-eecCCeeEEEECCCCCeEEEEcCC--------
Q 026765 75 DPKHADLIATASGD----------KTVRLWDARS------GKCSQQA-ELSGENINITYKPDGTHIAVGNRD-------- 129 (233)
Q Consensus 75 ~~~~~~~l~sg~~d----------~~i~iwd~~~------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d-------- 129 (233)
+|++. .|++++.| ..|.+||+.+ +...... ........++|+|||++|+..+.+
T Consensus 138 spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 138 LPERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp ETTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCCCC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 99875 55666665 5899999987 5543322 222334558899999999877754
Q ss_pred CcEEEEEcC-CC---eeeeeeec-CceeeEEEECCCCCEEEEEeCCC--eEEEEecCCceeeeEEeeecCc--------e
Q 026765 130 DELTILDVR-KF---KPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNG--TVEVLTYPSLRPLDTVVAHTAG--------C 194 (233)
Q Consensus 130 ~~i~i~d~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~--------v 194 (233)
..|.+||+. +. +....... ...+..+.|+|+|++++++..++ .+..|+..+++.......+... +
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 369999998 45 32222222 35678899999999777777788 5555555454432222222211 4
Q ss_pred eEEEECCCCCEEEEeeCCCcEEEE--ecCCcEEEEee
Q 026765 195 YCIAIDPMGRYFAVGSADSLVSLW--DISEMLCVRTF 229 (233)
Q Consensus 195 ~~i~~~p~~~~las~s~dg~v~iw--d~~~~~~i~~~ 229 (233)
.+++|+|+++++++++. +.++|| |+..++ ++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l 331 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDA 331 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEEC
T ss_pred ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEe
Confidence 57899999999999999 999999 555554 4444
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=9.3e-14 Score=108.74 Aligned_cols=210 Identities=10% Similarity=0.038 Sum_probs=143.1
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC----Ce
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD----KT 90 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d----~~ 90 (233)
.+.++...+.+++|+++|++++++..++.|.+|+.... ..... ...+...+.+++++|++ +++++...+ +.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~---~~~~~-~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK---EIKRP-FVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEEEE-EECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC---cEEEE-eeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 45567777899999999998888888999999987542 22221 22456789999999885 566666665 68
Q ss_pred EEEEECCCCeeeeeee---ecCCeeEEEECCCCCeEEEEcC------CCcEEEEEcCCCeeeeeeecCceeeEEEECCCC
Q 026765 91 VRLWDARSGKCSQQAE---LSGENINITYKPDGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG 161 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (233)
|.+||..++....... ....+..++++|+++.+++... .+.+..+|..+.+..........+..++|++++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 9999988766432221 1234567899999987776553 245666665543332221212246789999999
Q ss_pred CEEEEE-eCCCeEEEEecCC-ceeeeEE-----eee--cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 162 EMFFLT-TGNGTVEVLTYPS-LRPLDTV-----VAH--TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 162 ~~~~~~-~~~~~v~~~~~~~-~~~~~~~-----~~~--~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.++++ ..++.+.+|+... ++.+..+ ... ...+..++++++|+++++...++.|.+||. ++..++++.
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL 270 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEE
Confidence 866544 5678999999853 2222111 111 135778999999998888888899999998 466666654
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=1.2e-15 Score=131.97 Aligned_cols=195 Identities=10% Similarity=0.114 Sum_probs=131.1
Q ss_pred EEEEECcCCCEEEEEeCCC---------CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 24 HSVAWNCTGTKLASGSVDQ---------TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~---------~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
..++|||||++|+.++.++ .+.+||+.... ...+..|...+...+|+|++..+ +.+ .|+.|.+|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~~l-a~~-~~~~i~~~ 137 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHKL-AYV-WNNDIYVK 137 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTTCE-EEE-ETTEEEEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-----EEEcccCCCcceeeEECCCCCEE-EEE-ECCeEEEE
Confidence 4578999999999998874 45699986532 12355677889999999997654 454 57899999
Q ss_pred ECCCCeeeeeeeecC-------------------CeeEEEECCCCCeEEEEcCCC-------------------------
Q 026765 95 DARSGKCSQQAELSG-------------------ENINITYKPDGTHIAVGNRDD------------------------- 130 (233)
Q Consensus 95 d~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~~~d~------------------------- 130 (233)
|+.++...+...... ....+.|+|||++|+....|.
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~ 217 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence 998876443211111 112488999999998765321
Q ss_pred -----------cEEEEEcCC---C---eeeeeee------cCceeeEEEECCCCCEEEEEeC----CCeEEEEecCCce-
Q 026765 131 -----------ELTILDVRK---F---KPIHRRK------FGYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLR- 182 (233)
Q Consensus 131 -----------~i~i~d~~~---~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~- 182 (233)
.+.+||+.+ . +...... ....+..++|+|+|+.++.... +..+.+||..+++
T Consensus 218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG 297 (740)
T ss_dssp CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT
T ss_pred CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcc
Confidence 477788877 5 2221111 2345788999999997665533 2378899987765
Q ss_pred ---e--eeEE--eeecCcee-----EEEECCCCCEEE-EeeC-C--CcEEEEecCCcEE
Q 026765 183 ---P--LDTV--VAHTAGCY-----CIAIDPMGRYFA-VGSA-D--SLVSLWDISEMLC 225 (233)
Q Consensus 183 ---~--~~~~--~~~~~~v~-----~i~~~p~~~~la-s~s~-d--g~v~iwd~~~~~~ 225 (233)
+ ...+ ..|...|. ..+|+|||+.|+ ..+. + ..|.+||+..+++
T Consensus 298 ~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 298 RWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred ccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 1 2222 34555544 788999999877 6664 4 4588888876654
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=4e-14 Score=111.06 Aligned_cols=204 Identities=11% Similarity=0.096 Sum_probs=144.8
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEec---CcCcEEEEEEcCCCCCEEEEEe-CCCeEEEEE
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG---HADSVDQLCWDPKHADLIATAS-GDKTVRLWD 95 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~sg~-~d~~i~iwd 95 (233)
......++++++++..++...++.|.+||..... ....+.... .......+++ ++..++++.. .++.|.++|
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEE
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEE
Confidence 4667899999998655555589999999986421 111222211 0113445666 3445555544 488999999
Q ss_pred CCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCC----------CcEEEEEcCCCeeeeeeec--CceeeEEEECCCCCE
Q 026765 96 ARSGKCSQQAELSGENINITYKPDGTHIAVGNRD----------DELTILDVRKFKPIHRRKF--GYEVNEIAWNMTGEM 163 (233)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 163 (233)
..+++..........+..+.++|+|+.++++..+ +.+.++|..+.+....... +.....++++|+++.
T Consensus 159 ~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 159 TETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 9998877776665556678999999877766554 7899999988876655544 346889999999999
Q ss_pred EEEEeCCCeEEEEecCCceeeeE--EeeecCceeEEEECC-CCCEEEEe----eCCCcEEEEecCCcEEEEeee
Q 026765 164 FFLTTGNGTVEVLTYPSLRPLDT--VVAHTAGCYCIAIDP-MGRYFAVG----SADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~v~~i~~~p-~~~~las~----s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.++.. .+.++|..+.+.... +..+......++++| +++.+++. ..++.|.+||.+ ++.+++|.
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 888765 899999877654321 111245678999999 55666666 678999999998 98888875
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=1.4e-14 Score=115.52 Aligned_cols=204 Identities=9% Similarity=0.025 Sum_probs=130.4
Q ss_pred eCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEE--EcCCCCCEEEE----------
Q 026765 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLC--WDPKHADLIAT---------- 84 (233)
Q Consensus 17 ~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s---------- 84 (233)
.+|...+..+.|+|+|+.|+.++.++.|++||+.... ....+..+...+.... ++|++. +++.
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~----~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE----ENVVYQVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVP 151 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC----EEEEEECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCC
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc----ceeeeechhhcccccceeECCCCC-eeccccccCccccc
Confidence 3455555577899999999999999999999987532 1112333444443333 377654 4442
Q ss_pred ------------EeCCCeEEEEECCCCeeeeeeeecCCeeEEEECC-CCCeEEEEcCC------CcEEEEEcCCCeeeee
Q 026765 85 ------------ASGDKTVRLWDARSGKCSQQAELSGENINITYKP-DGTHIAVGNRD------DELTILDVRKFKPIHR 145 (233)
Q Consensus 85 ------------g~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~ 145 (233)
...+..|.+||+.+++.............+.|+| +++.|+....+ ..|.++|+...+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 2345789999999887655444445566789999 99988876653 3688888765433222
Q ss_pred eecC--ceeeEEEECCCCCEEEEEeC-CC----eEEEEecCCceee--eEEeeecCc---eeEEEECCCCCEEEEe----
Q 026765 146 RKFG--YEVNEIAWNMTGEMFFLTTG-NG----TVEVLTYPSLRPL--DTVVAHTAG---CYCIAIDPMGRYFAVG---- 209 (233)
Q Consensus 146 ~~~~--~~~~~~~~~~~~~~~~~~~~-~~----~v~~~~~~~~~~~--~~~~~~~~~---v~~i~~~p~~~~las~---- 209 (233)
.... ..+....|+|+|+.++..+. ++ .+.+||..+++.. ..+.++... ...++|+|+|+.|+..
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 2222 34677899999997765432 22 3999998876532 222221100 1223799999988754
Q ss_pred -----eCCCcEEEEecCCcEE
Q 026765 210 -----SADSLVSLWDISEMLC 225 (233)
Q Consensus 210 -----s~dg~v~iwd~~~~~~ 225 (233)
..+..|.+||+..++.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp -----CCCCEEEEEETTTTEE
T ss_pred cccccCCCCEEEEEeccCCce
Confidence 4567899999998765
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=5.9e-14 Score=120.87 Aligned_cols=207 Identities=12% Similarity=0.051 Sum_probs=135.5
Q ss_pred CccccEEEEEECcCCCEEEEEeCCC-----CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCe--
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQ-----TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT-- 90 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~-----~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~-- 90 (233)
+|+..+..++|||||++||.++.++ +|++||+... ......+.. ..+..++|+|++. .|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~~~~--~~~~~~~wspDg~-~l~~~~~~~~~~ 195 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA---KELPDVLER--VKFSCMAWTHDGK-GMFYNAYPQQDG 195 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT---EEEEEEEEE--ECSCCEEECTTSS-EEEEEECCCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---CCCcccccC--cccceEEEEeCCC-EEEEEEECCccc
Confidence 3555789999999999998776543 8999998642 222222222 2256789999875 4555666654
Q ss_pred --------------EEEEECCCCeeeeee--ee---cCCeeEEEECCCCCeEEEEcC-----CCcEEEEEcCC------C
Q 026765 91 --------------VRLWDARSGKCSQQA--EL---SGENINITYKPDGTHIAVGNR-----DDELTILDVRK------F 140 (233)
Q Consensus 91 --------------i~iwd~~~~~~~~~~--~~---~~~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~------~ 140 (233)
|.+|++.+++..... .. ......+.|+|||++|+.... +..+.+||+.+ .
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999877532111 21 122457899999999987664 56799999875 3
Q ss_pred e-eeeeeecCceeeEEEECCCCCEEEEEeC----CCeEEEEecCCce--eeeEEeeecC--ceeEEEECCCCCEEEEeeC
Q 026765 141 K-PIHRRKFGYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLR--PLDTVVAHTA--GCYCIAIDPMGRYFAVGSA 211 (233)
Q Consensus 141 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~--~~~~~~~~~~--~v~~i~~~p~~~~las~s~ 211 (233)
. ....+..........|+++|+.++..+. ++.+.+|+..+.+ ....+..|.. .+..++|++++.++++...
T Consensus 276 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 276 ILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp SCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred ccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 2 1222222111112357788888777654 3468888887653 2345555654 5778899988888889988
Q ss_pred CCc--EEEEecCCcEEEEeee
Q 026765 212 DSL--VSLWDISEMLCVRTFT 230 (233)
Q Consensus 212 dg~--v~iwd~~~~~~i~~~~ 230 (233)
|+. |.+||+.++..++++.
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEecC
Confidence 985 5667776776666553
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=2.1e-13 Score=104.36 Aligned_cols=190 Identities=12% Similarity=0.080 Sum_probs=144.4
Q ss_pred cCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCc-CcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeec
Q 026765 30 CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS 108 (233)
Q Consensus 30 ~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~ 108 (233)
..++.|++++.|+.|.+||.++. + ...++..+. ..+.++.+.|++ ++++ +.++.|..||. +++....+...
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG---~-~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK---E-IVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT---E-EEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred CCCcEEEeeCCCCEEEEEECCCC---e-EEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 34688999999999999997542 2 234555554 467888999976 5766 45788999999 78776666543
Q ss_pred --CCeeEEEECCCCCeEEEEcC-CCcEEEEEcCCCeeeeeeecC-------ceeeEEEECCCCCEEEEEeCCCeEEEEec
Q 026765 109 --GENINITYKPDGTHIAVGNR-DDELTILDVRKFKPIHRRKFG-------YEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (233)
Q Consensus 109 --~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 178 (233)
.....+.+.|+|+.+++.+. ++.+..+|. .++.+...... .....+...++|+++++...++.+..||.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 24456889999999998877 677777775 45544443321 12345677889999999999999999998
Q ss_pred CCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
. ++.+.++... ..+.++...++|+.+++++.++.|..+|.++++.+-+|.
T Consensus 154 ~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 154 N-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp T-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred C-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 7 8887777654 456778889999999999999999999999999988885
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=9e-14 Score=109.29 Aligned_cols=190 Identities=13% Similarity=0.063 Sum_probs=120.5
Q ss_pred ccEEEEEECcCCCEEEEEeCC---CC--EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC--------
Q 026765 21 KKVHSVAWNCTGTKLASGSVD---QT--ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG-------- 87 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D---~~--v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-------- 87 (233)
..+..++|+|||++|+.++.+ +. |.+|++.. +... .+..+.. +..++|+|++..+++++..
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---g~~~--~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET---LSSK--KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT---TEEE--EEEEESE-EEEEEECTTSSEEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC---CceE--EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcE
Confidence 457889999999999888764 44 55555542 1222 2222333 8999999987655444322
Q ss_pred ------------------CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCC-------cEEEEEcCCCee
Q 026765 88 ------------------DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD-------ELTILDVRKFKP 142 (233)
Q Consensus 88 ------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~ 142 (233)
...|.+||+.+++....+... ....+.|+|++ .++++..+. ...+|.+.+.+.
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 210 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE 210 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce
Confidence 257889999888762333333 56678999999 777665442 334444434332
Q ss_pred eeeeecCceeeEEEECCCCCEEEEEeCC--------CeEEEEecCCceeeeEEeeecCceeE-EEECCCCCEEEEeeCCC
Q 026765 143 IHRRKFGYEVNEIAWNMTGEMFFLTTGN--------GTVEVLTYPSLRPLDTVVAHTAGCYC-IAIDPMGRYFAVGSADS 213 (233)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~~v~~-i~~~p~~~~las~s~dg 213 (233)
...... ..+ ..++|+|+.++..+.+ ..+.+|+ +++.......+...+.. +.|+ ++ ++++++.++
T Consensus 211 ~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 221121 222 2348999988877643 3677777 44433223345667775 8999 88 999999999
Q ss_pred cEEEEecCCcEEE
Q 026765 214 LVSLWDISEMLCV 226 (233)
Q Consensus 214 ~v~iwd~~~~~~i 226 (233)
.++|| +.+++..
T Consensus 284 ~~~l~-~~~g~~~ 295 (347)
T 2gop_A 284 SVNLY-IWDGEIK 295 (347)
T ss_dssp EEEEE-EESSSEE
T ss_pred cEEEE-EcCCceE
Confidence 99999 8765543
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=5.5e-15 Score=118.04 Aligned_cols=197 Identities=9% Similarity=-0.030 Sum_probs=127.8
Q ss_pred EEEEEECcCCCEEEEEeC-CC--CEEEEecccCCCCceeeEEEecCcCc-EEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 23 VHSVAWNCTGTKLASGSV-DQ--TARVWHIEPHGHGKVKDIELRGHADS-VDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~-D~--~v~vW~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
+..++|+|+|++|+..+. ++ .|.+|++... .. ..+..+... ...+.|+|++ +.|+.++.++.|.+||+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~---~~--~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ---QA--VQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT---EE--EECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC---cE--EEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCC
Confidence 778899999999877654 34 5666676431 11 223333333 2337899986 5667778888999999988
Q ss_pred CeeeeeeeecCCe-eE-------------------EEECCCCCeEEEE-----cCCCcEEEEEcCCCeeeeeeecCceee
Q 026765 99 GKCSQQAELSGEN-IN-------------------ITYKPDGTHIAVG-----NRDDELTILDVRKFKPIHRRKFGYEVN 153 (233)
Q Consensus 99 ~~~~~~~~~~~~~-~~-------------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~ 153 (233)
++........... .. +.++|+++.++.. ..+..|.+||+.+.+..........+.
T Consensus 112 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~ 191 (396)
T 3c5m_A 112 LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLG 191 (396)
T ss_dssp CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEE
T ss_pred CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccc
Confidence 7654443322211 11 2457777776544 345678999998766544444445678
Q ss_pred EEEECC-CCCEEEEEeCC------CeEEEEecCCceeeeEEeee--cCceeEEEECCCCCEEEEeeCC-----CcEEEEe
Q 026765 154 EIAWNM-TGEMFFLTTGN------GTVEVLTYPSLRPLDTVVAH--TAGCYCIAIDPMGRYFAVGSAD-----SLVSLWD 219 (233)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~--~~~v~~i~~~p~~~~las~s~d-----g~v~iwd 219 (233)
.+.|+| +++.++..+.+ ..+.+++....+. ..+..+ ...+..++|+|+|++|+.++.+ +.|.+||
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 899999 78877666543 3577888754432 222223 2247789999999988877654 4599999
Q ss_pred cCCcEEE
Q 026765 220 ISEMLCV 226 (233)
Q Consensus 220 ~~~~~~i 226 (233)
+.+++..
T Consensus 271 ~~~g~~~ 277 (396)
T 3c5m_A 271 PETLENE 277 (396)
T ss_dssp TTTCCEE
T ss_pred CCCCCeE
Confidence 9877543
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=1.6e-13 Score=105.85 Aligned_cols=201 Identities=12% Similarity=0.077 Sum_probs=134.7
Q ss_pred ceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE--EecC-cCcEEEEEEcCCCCCEEEE----E
Q 026765 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE--LRGH-ADSVDQLCWDPKHADLIAT----A 85 (233)
Q Consensus 13 ~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~~l~s----g 85 (233)
.+.+..+...+.+++|+|+|+++++...++.|.+|+..... ..... ..+. ...+..++++|++ +++++ |
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g 136 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE---WESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYG 136 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC---EEEEECEETTEECCCCCCEEECTTS-CEEEEECSHH
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc---EEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccc
Confidence 34566677889999999999988888778999999975322 11111 1111 2345678999975 57776 3
Q ss_pred e-------------CCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcC-CCee---eeeee-
Q 026765 86 S-------------GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVR-KFKP---IHRRK- 147 (233)
Q Consensus 86 ~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~---~~~~~- 147 (233)
. ..+.|..+|.. ++.............++|+|+++.+++...++.|.+||+. ..+. .....
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 215 (296)
T 3e5z_A 137 IDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV 215 (296)
T ss_dssp HHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC
T ss_pred cccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC
Confidence 2 12355555554 4433222222345679999999998777778999999986 3322 11111
Q ss_pred cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEE-CCCCCEEEEeeCCCcEEEEecCCc
Q 026765 148 FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAI-DPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~-~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
....+..++++++|+++++. ++.+.+|+.. ++.+..+..+.. +.+++| +|+++.|.+++.++ +.-++.++.
T Consensus 216 ~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 216 EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 12245678999999876666 7889999975 667777776666 899999 68999998888764 444455543
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=5.6e-14 Score=120.78 Aligned_cols=203 Identities=13% Similarity=0.013 Sum_probs=130.3
Q ss_pred CccccEEEEEECcCCCEEE-----EEeCCCCEEEEecccCCCCceeeEEEecCcCcE--EEEEEcCCCCCEEEEEeCCCe
Q 026765 18 GHKKKVHSVAWNCTGTKLA-----SGSVDQTARVWHIEPHGHGKVKDIELRGHADSV--DQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~-----s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~sg~~d~~ 90 (233)
+|...+..++|||||++|| +|+.+.+|++||+...... . ..+...+ ..++|+|++. .|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~--~----~~~~~~~~~~~~~wspDg~-~l~~~~~d~~ 190 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS--K----VDVIEGGKYATPKWTPDSK-GFYYEWLPTD 190 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC--S----SCCBSCCTTCCCEECTTSS-EEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc--C----CcccCcccccceEEecCCC-EEEEEEecCC
Confidence 4666799999999999998 5555678999999753311 0 1122222 6789999875 5666777665
Q ss_pred -------------EEEEECCCCeee--eeeee--c-CCeeEEEECCCCCeEEEEcCCC----cEEEEEcCCCeeeeeeec
Q 026765 91 -------------VRLWDARSGKCS--QQAEL--S-GENINITYKPDGTHIAVGNRDD----ELTILDVRKFKPIHRRKF 148 (233)
Q Consensus 91 -------------i~iwd~~~~~~~--~~~~~--~-~~~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~ 148 (233)
|.+|++.++... ..... + .....+.|+|||++|+..+.++ .+.+++..+.+.......
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 270 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG 270 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC
Confidence 999999877532 11111 1 2456789999999998877665 566676544333222222
Q ss_pred CceeeEEEECCCCCEEEEEe---CCCeEEEEecCCcee--eeEEeee--cCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 149 GYEVNEIAWNMTGEMFFLTT---GNGTVEVLTYPSLRP--LDTVVAH--TAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~--~~~~~~~--~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
........+ +++++++.+. .++.+.+|+..+++. ...+..+ ...+..++++ ++.++++...|+..+||.+.
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 223334445 5666444443 358899999866542 2344444 3457778888 67788899999998888765
Q ss_pred -CcEEEEee
Q 026765 222 -EMLCVRTF 229 (233)
Q Consensus 222 -~~~~i~~~ 229 (233)
++..++++
T Consensus 349 ~~g~~~~~l 357 (695)
T 2bkl_A 349 LKGKPVRTV 357 (695)
T ss_dssp TTCCEEEEC
T ss_pred CCCCeeEEe
Confidence 45555543
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=3.4e-13 Score=102.30 Aligned_cols=199 Identities=11% Similarity=0.042 Sum_probs=140.2
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe-cCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
+...+.+++++++|+.+++.. ++.|.+|+..... .. .+. .....+..+++++++ +++++...++.|.+|+..
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~---~~--~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 137 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN---QT--VLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAG 137 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---CE--ECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---Ee--eeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECC
Confidence 335678899999999777766 8899999875321 11 122 223568899999875 577777778899999865
Q ss_pred CCeeeeeeee-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC-ceeeEEEECCCCCEEEEEeCCCeEEE
Q 026765 98 SGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLTTGNGTVEV 175 (233)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 175 (233)
+......... ...+..++++++++.+++...++.|.+||............. ..+..++++++|..+++...++.+.+
T Consensus 138 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 138 SKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp CCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred CceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEE
Confidence 5433221111 124567899999987777777889999998765433221112 45778999999987777778889999
Q ss_pred EecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
|+............+...+.+++++|+|+.+++...++.|+++++.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 218 LLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9976543322222233568899999999988999999999999998654
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=1.4e-13 Score=107.69 Aligned_cols=192 Identities=8% Similarity=0.079 Sum_probs=137.2
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
..|.+++|++++..+++.+.++.++.|.-. ....+..+...+.+++|+|++ ++++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE-------PWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE-------EEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccceeEEeecccCcccccc-------eeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCc
Confidence 457788999998888888889999999321 122455666778999999875 577788889999999998876
Q ss_pred eeeee-eecCCeeEEEECCCCCeEEEEcCC----CcEEEEEcCCCeeeeee---ecCceeeEEEECCCCCEEEEEeC---
Q 026765 101 CSQQA-ELSGENINITYKPDGTHIAVGNRD----DELTILDVRKFKPIHRR---KFGYEVNEIAWNMTGEMFFLTTG--- 169 (233)
Q Consensus 101 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--- 169 (233)
..... .....+..++++|+++.+++...+ +.|.+||..+....... .....+..+.++++|+++++...
T Consensus 78 ~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 78 IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT
T ss_pred EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccc
Confidence 54433 233556789999999887777666 68999998765433221 12345788999999988776653
Q ss_pred ---CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEE-EEeeCCCcEEEEecC
Q 026765 170 ---NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 221 (233)
Q Consensus 170 ---~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~ 221 (233)
.+.+..++....+. ..+..+...+..++|+|++++| ++.+.++.|.+||++
T Consensus 158 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTV-TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp TBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCCCceEEEEeCCCCEE-EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 35566666543333 2333344567899999999865 455568899999996
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=2.7e-14 Score=114.01 Aligned_cols=194 Identities=8% Similarity=0.023 Sum_probs=125.7
Q ss_pred EEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEE-------------------EEEcCCCCCEEEEE
Q 026765 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ-------------------LCWDPKHADLIATA 85 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~l~sg 85 (233)
.+.|+|+|++|+.++.++.|.+|++.... ... ....+...... +.|+|++..+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~---~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 160 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLE---EQV-IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAE 160 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCC---EEE-EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCC---cEE-EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeee
Confidence 37899999999999999999999986422 111 12223222222 34566654332221
Q ss_pred ----eCCCeEEEEECCCCeeeeeeeecCCeeEEEECC-CCCeEEEEcCC------CcEEEEEcCCCeeeeeeec--Ccee
Q 026765 86 ----SGDKTVRLWDARSGKCSQQAELSGENINITYKP-DGTHIAVGNRD------DELTILDVRKFKPIHRRKF--GYEV 152 (233)
Q Consensus 86 ----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~--~~~~ 152 (233)
..+..|.+||+.+++.............+.|+| ++..|+..+.+ ..|.+||+...+....... ...+
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC 240 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred eccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence 466789999998887655444445566789999 78877665443 3588888765432222221 2357
Q ss_pred eEEEECCCCCEEEEEeCC-----CeEEEEecCCceeeeEEeeecCceeEEEECC-CCCEEEEee----------------
Q 026765 153 NEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDP-MGRYFAVGS---------------- 210 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~las~s---------------- 210 (233)
..+.|+|+|+.++..+.+ +.+.+||..+++... +.... ... +.|+| +|++++.++
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 788999999987766433 449999987765432 22112 223 88999 999888765
Q ss_pred CCCcEEEEecCCcEE
Q 026765 211 ADSLVSLWDISEMLC 225 (233)
Q Consensus 211 ~dg~v~iwd~~~~~~ 225 (233)
.++.|.+||+..+..
T Consensus 318 ~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCEEEEEETTTTBC
T ss_pred CCCcEEEEecccCce
Confidence 347899999987653
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=1.5e-12 Score=102.03 Aligned_cols=194 Identities=8% Similarity=0.022 Sum_probs=140.9
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
.....+.++ .++..++...+++|.+||..+.. .+. ++. .......+++++++ +++++...++.|.+||..+++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~~--~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EVG--RIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EEE--EEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EEE--EcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe
Confidence 345677773 34555666678999999986422 112 233 34567889998875 565555589999999999988
Q ss_pred eeeeeeecC------CeeEEEECCCCCeEEEEc--CCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCC--
Q 026765 101 CSQQAELSG------ENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN-- 170 (233)
Q Consensus 101 ~~~~~~~~~------~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 170 (233)
......... .+..+++ ++..+.++. .++.|.++|+.+.+.+.....+.....+.++++|+++++...+
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~ 194 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYE 194 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCT
T ss_pred EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCcc
Confidence 776665544 4556777 445555554 4789999999988877777666667889999999977776655
Q ss_pred --------CeEEEEecCCceeeeEEeee-cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 171 --------GTVEVLTYPSLRPLDTVVAH-TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 171 --------~~v~~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
+.+.++|..+.+....+... ...+..++++|++++|..+.. .|.+||+.+++.
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 78999999888877665432 346789999999998877654 899999987764
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=1.3e-12 Score=99.00 Aligned_cols=197 Identities=13% Similarity=0.044 Sum_probs=135.4
Q ss_pred cEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 22 KVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
...+++++++|+..+ +...++.|.+|+..... .. .....+...+..+++++++ +++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~---~~-~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---TT-VLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------E-ECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc---cc-eEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCce
Confidence 778999999999777 55778999999864321 11 1111233467789999875 4665555 8899999987654
Q ss_pred eeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEEeCCCeEEEEec
Q 026765 101 CSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (233)
Q Consensus 101 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 178 (233)
........ ..+..++++++++.+++...++.|.+|+..+......... ...+..++++++++.+++...++.+.+|+.
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 32211111 3466799999998777777788999998655433221111 125678999999997777777889999998
Q ss_pred CCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
...........+...+..++++++|.++++...++.|.+||.....
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 6554332222233567899999999888888788999999987543
No 188
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=2.3e-12 Score=99.81 Aligned_cols=209 Identities=9% Similarity=-0.010 Sum_probs=137.4
Q ss_pred eeeCccccEEEEEECcCCCEEEE-------EeCCCCEEEEecccCCCCceeeEEE---ecCcCcEEEEEEcCCCCCEEEE
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLAS-------GSVDQTARVWHIEPHGHGKVKDIEL---RGHADSVDQLCWDPKHADLIAT 84 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s-------~~~D~~v~vW~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s 84 (233)
.+...-....+++|++++..+++ +..++.|.+|+.... ....... .++...+..+++++++++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG---KKTVICKPEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC---CEEEEECCEETTEECCEEEEEECSSSSEEEEE
T ss_pred hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC---cEEEEEecccCCCCCCCceEEEecCCCcEEEE
Confidence 34445556789999999988888 677899999986532 2222111 1245678899999873455544
Q ss_pred EeCCCeEEEEECCCCeeeee-eeec-----CCeeEEEECCCCCeEEEEcCC---------------CcEEEEEcCCCeee
Q 026765 85 ASGDKTVRLWDARSGKCSQQ-AELS-----GENINITYKPDGTHIAVGNRD---------------DELTILDVRKFKPI 143 (233)
Q Consensus 85 g~~d~~i~iwd~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~ 143 (233)
. ....|.+||.. ++.... .... ..+..++++++++.+++...+ +.+..+|.. .+..
T Consensus 89 ~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 89 D-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp E-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred E-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 4 44578899988 654332 2111 224579999999877776554 467777754 3322
Q ss_pred eeeecCceeeEEEEC----CCCCEEEEE-eCCCeEEEEecC-Cce-----eeeEEeeec-CceeEEEECCCCCEEEEeeC
Q 026765 144 HRRKFGYEVNEIAWN----MTGEMFFLT-TGNGTVEVLTYP-SLR-----PLDTVVAHT-AGCYCIAIDPMGRYFAVGSA 211 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~v~~~~~~-~~~-----~~~~~~~~~-~~v~~i~~~p~~~~las~s~ 211 (233)
...........++++ ++++.++++ ..++.+.+|+.. +++ ....+..+. ..+..++++++|+++++...
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 221222245778899 999766555 567899999875 333 122222232 55788999999999888888
Q ss_pred CCcEEEEecCCcEEEEee
Q 026765 212 DSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 212 dg~v~iwd~~~~~~i~~~ 229 (233)
++.|.+||.++++.+..+
T Consensus 246 ~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp TTEEEEECTTCBSCSEEE
T ss_pred CCEEEEEcCCCCcEeEEE
Confidence 899999999867655544
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=9.3e-13 Score=113.44 Aligned_cols=202 Identities=7% Similarity=-0.042 Sum_probs=133.1
Q ss_pred EEEEEECcCCCEEEEEeCCCC----------------EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe
Q 026765 23 VHSVAWNCTGTKLASGSVDQT----------------ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS 86 (233)
Q Consensus 23 V~~~~~~~~~~~l~s~~~D~~----------------v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~ 86 (233)
+..++|+|||+.|+.++.|+. |++|++...........+...|...+..+.|+|++..++++..
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 567999999999999988876 9999986422111121222335566889999998765554443
Q ss_pred C----CCeEEEEECCC------Ce-eeeeeeecCCeeEEEECCCCCeEEEEcCC----CcEEEEEcCCCee---eeeeec
Q 026765 87 G----DKTVRLWDARS------GK-CSQQAELSGENINITYKPDGTHIAVGNRD----DELTILDVRKFKP---IHRRKF 148 (233)
Q Consensus 87 ~----d~~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~---~~~~~~ 148 (233)
. +..|.+||+.+ +. ....+..........|+|+|..|+..+.. ..|.+||+.+... ......
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 1 56899999976 42 22333322222233578899888766543 3588999876531 111222
Q ss_pred C--ceeeEEEECCCCCEEEEEeCCCeE--EEEecCCceeeeEEeeecCceeEEEECCCCCEEEEe-e---CCCcEEEEec
Q 026765 149 G--YEVNEIAWNMTGEMFFLTTGNGTV--EVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG-S---ADSLVSLWDI 220 (233)
Q Consensus 149 ~--~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~-s---~dg~v~iwd~ 220 (233)
. ..+..+.|++++.++++...++.. .+|+..+++....+..+...+..++++|+++.++.. + ..+.|.+||+
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 1 257778888777777777778755 455655666666777777778889999998765532 2 3478999999
Q ss_pred CCcE
Q 026765 221 SEML 224 (233)
Q Consensus 221 ~~~~ 224 (233)
.+++
T Consensus 413 ~tg~ 416 (710)
T 2xdw_A 413 TKEE 416 (710)
T ss_dssp TSSS
T ss_pred CCCc
Confidence 8765
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.5e-11 Score=103.01 Aligned_cols=195 Identities=14% Similarity=0.070 Sum_probs=140.2
Q ss_pred cCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeeeeeeee
Q 026765 30 CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--SGKCSQQAEL 107 (233)
Q Consensus 30 ~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~--~~~~~~~~~~ 107 (233)
|.+..+++...|++|.++|..+.. .+. ++. ....+..+.|+|++ +++++++.|+.|.+||+. +.+.......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~--v~~--~i~-~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE--IKT--VLD-TGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC--EEE--EEE-CSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCe--EEE--EEe-CCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 445567788889999999986432 222 232 23356689999986 566778899999999995 6666666665
Q ss_pred cCCeeEEEEC----CCCCeEEEEcC-CCcEEEEEcCCCeeeeeeecCc------------eeeEEEECCCCCEEEEE-eC
Q 026765 108 SGENINITYK----PDGTHIAVGNR-DDELTILDVRKFKPIHRRKFGY------------EVNEIAWNMTGEMFFLT-TG 169 (233)
Q Consensus 108 ~~~~~~~~~~----~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~ 169 (233)
......++|+ |||++++++.. ++.+.++|..+.+.+....... .+..+..++++..+++. ..
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 5566789999 69999887765 4889999998888776655321 35567778877666555 45
Q ss_pred CCeEEEEecCCceeeeE-EeeecCceeEEEECCCCCEEEEee-CCCcEEEEecCCcEEEEeee
Q 026765 170 NGTVEVLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~las~s-~dg~v~iwd~~~~~~i~~~~ 230 (233)
.|.+.++|+.+.+.... -.........+.|+|++++++++. .+++|.++|+++++.+..+.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 69999999876432211 112334566889999999876655 57899999999998877654
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=3.2e-12 Score=100.37 Aligned_cols=185 Identities=14% Similarity=0.147 Sum_probs=119.9
Q ss_pred ccccEEEEEECcCCCEEEEEeCC---------------------------CCEEEEecccCCCCceeeEEEecCcCcEEE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVD---------------------------QTARVWHIEPHGHGKVKDIELRGHADSVDQ 71 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D---------------------------~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~ 71 (233)
+.. +..++|+|+|+.|+.++.+ ..|.+|++... .. ...+.. . .+..
T Consensus 103 ~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~-~~~l~~-~-~~~~ 175 (347)
T 2gop_A 103 AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EV-IEEFEK-P-RFSS 175 (347)
T ss_dssp ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT---EE-EEEEEE-E-TTCE
T ss_pred CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC---eE-EeeecC-C-Cccc
Confidence 344 9999999999999888743 46777887532 22 012222 3 7788
Q ss_pred EEEcCCCCCEEEEEeCCC-------eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCC--------CcEEEEE
Q 026765 72 LCWDPKHADLIATASGDK-------TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD--------DELTILD 136 (233)
Q Consensus 72 ~~~~~~~~~~l~sg~~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------~~i~i~d 136 (233)
++|+|++ +++++..++ ...||.+.+++....... ... ..++|+|++|+..+.+ ..|.+||
T Consensus 176 ~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 176 GIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 9999986 777776542 345554444443322222 222 2338999998876644 3577777
Q ss_pred cCCCeeeeeee-cCceeeE-EEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCc
Q 026765 137 VRKFKPIHRRK-FGYEVNE-IAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSL 214 (233)
Q Consensus 137 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~ 214 (233)
+.+...... ....+.. +.|+ ++ +++++..++..++| ..+++. ..+..+...|.+++|+| .++++++.++.
T Consensus 251 --~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 251 --GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp --SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSS
T ss_pred --CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCC
Confidence 333222111 2345665 8899 88 88888899999999 765443 44455677889999999 67777777776
Q ss_pred E-EEEecCCcE
Q 026765 215 V-SLWDISEML 224 (233)
Q Consensus 215 v-~iwd~~~~~ 224 (233)
. .||.++ ++
T Consensus 323 ~~~l~~~~-g~ 332 (347)
T 2gop_A 323 LRELFTWD-GE 332 (347)
T ss_dssp CCEEEEES-SS
T ss_pred hHHheEeC-Cc
Confidence 5 888776 54
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=6.2e-13 Score=105.87 Aligned_cols=175 Identities=10% Similarity=0.081 Sum_probs=125.1
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCC------CCceee-EEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHG------HGKVKD-IELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~------~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.++.+++++...++++|+.| .++||+++.-. ...... ... .+.. |+.++| + ...|+.+ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d-~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--H-GDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--E-TTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--C-CCEEEEE-cCCcEEEE
Confidence 68999999999999999987 45569864211 000111 122 3556 999999 4 4677777 88999999
Q ss_pred ECCCCeeeeee-eecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeE
Q 026765 95 DARSGKCSQQA-ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTV 173 (233)
Q Consensus 95 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 173 (233)
|+++-...... .+......+.+.+. .++++..||.+.+||+...+... ....+.+++|+|.| ++++..||.+
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCE
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 98765432222 22333445555443 38889999999999998665432 33579999999999 7889999999
Q ss_pred EEEecCCcee--eeEE------e---eecCceeEEEECCCCCEEEEee
Q 026765 174 EVLTYPSLRP--LDTV------V---AHTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 174 ~~~~~~~~~~--~~~~------~---~~~~~v~~i~~~p~~~~las~s 210 (233)
++|+.+..+. ...+ . +|...|.+|.|.+++.++++-+
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9998876654 4445 2 3677899999999999988743
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=2.9e-11 Score=92.44 Aligned_cols=207 Identities=15% Similarity=0.077 Sum_probs=149.4
Q ss_pred eeeCcc-ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecC-cCcEEEEEEcCCCCCEEEEEeC-CCeE
Q 026765 15 EYTGHK-KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH-ADSVDQLCWDPKHADLIATASG-DKTV 91 (233)
Q Consensus 15 ~~~~H~-~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~sg~~-d~~i 91 (233)
++..|. ..+++++++|+|++++ +.++.|..||.+ . ..+ .++..+ ...+.++.+.+++ +++++.+. ++.+
T Consensus 30 ~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~-G--~~~--W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v 101 (276)
T 3no2_A 30 EYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRD-G--REL--WNIAAPAGCEMQTARILPDG-NALVAWCGHPSTI 101 (276)
T ss_dssp EEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTT-S--CEE--EEEECCTTCEEEEEEECTTS-CEEEEEESTTEEE
T ss_pred EeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCC-C--CEE--EEEcCCCCccccccEECCCC-CEEEEecCCCCEE
Confidence 344444 4688999999999999 457889998862 1 122 344433 3468888899876 56667666 7788
Q ss_pred EEEECCCCeeeeeeeecC-------CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEE
Q 026765 92 RLWDARSGKCSQQAELSG-------ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (233)
..+|. +++....+.... ....+...++|+++++...++.+..||.. ++.+........+..+...++++.+
T Consensus 102 ~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 102 LEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCL 179 (276)
T ss_dssp EEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEE
T ss_pred EEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEE
Confidence 88886 566555444321 22346788999999999999999999987 7777776655456667778999999
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeec------CceeEEEECCCCCEEEEeeCC--------CcEEEEec-CCcEEEEee
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHT------AGCYCIAIDPMGRYFAVGSAD--------SLVSLWDI-SEMLCVRTF 229 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~v~~i~~~p~~~~las~s~d--------g~v~iwd~-~~~~~i~~~ 229 (233)
+++..++.+..+|..+++.+-++..+. ..+..+...++|+.+++.... +..+++.+ .+++.+-+|
T Consensus 180 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp EECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred EEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 998888899999998898887776432 226788899999998887422 24567777 577777766
Q ss_pred ec
Q 026765 230 TK 231 (233)
Q Consensus 230 ~~ 231 (233)
..
T Consensus 260 ~~ 261 (276)
T 3no2_A 260 ND 261 (276)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=6.4e-11 Score=90.73 Aligned_cols=199 Identities=12% Similarity=0.058 Sum_probs=141.4
Q ss_pred eeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd 95 (233)
+..+...+.+++++++|+..++...++.|.+|+.. . .........+...+..+++++++ .++++...++.|..||
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~---~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G---KITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRIT 84 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C---CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C---CeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEEC
Confidence 34566789999999999988887778999999875 2 22322333345678999999875 5666766688999999
Q ss_pred CCCCeeeeeeee---cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-e-cCceeeEEEECCCCCEEEEEeCC
Q 026765 96 ARSGKCSQQAEL---SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-K-FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 96 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
.. ++. ..... ...+..+++.++++.+++...++.+..||. ..+..... . ....+..+++.++++.+++...+
T Consensus 85 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 85 KK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 86 332 22221 234567899999988877777889999998 33322211 1 23457889999999888877778
Q ss_pred CeEEEEecCCceeeeE-EeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 171 GTVEVLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
+.+..++. +++.... +..+...+..++++++++++++...++.|.+||. ++.
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 89999997 5443321 2223456789999999998777777889999999 554
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=1.6e-11 Score=94.94 Aligned_cols=195 Identities=10% Similarity=0.081 Sum_probs=131.9
Q ss_pred ccccEEEEEECcC-CCEEEEEeCCCCEEEEecccCCCCceeeEEE-e----c-CcCcEEEEEEcCCCCCEEEEEeCC---
Q 026765 19 HKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIEL-R----G-HADSVDQLCWDPKHADLIATASGD--- 88 (233)
Q Consensus 19 H~~~V~~~~~~~~-~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~-~----~-h~~~v~~~~~~~~~~~~l~sg~~d--- 88 (233)
+...+.+++++++ |+++++.. ++.|.+|+.+ .. .. .+ . + ....+..+++++++ +++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~---~~--~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~ 140 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GT---FE--EIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVA 140 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SC---EE--ECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCT
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CC---EE--EEEeccCCCccccCCcCEEECCCC-CEEEEecCcccc
Confidence 5677999999999 66555544 4478888865 21 11 11 1 1 12357899999875 566665544
Q ss_pred ------------CeEEEEECCCCeeeeeeeecCCeeEEEEC----CCCCeEEEE-cCCCcEEEEEcC-CCeee-----ee
Q 026765 89 ------------KTVRLWDARSGKCSQQAELSGENINITYK----PDGTHIAVG-NRDDELTILDVR-KFKPI-----HR 145 (233)
Q Consensus 89 ------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~-~~d~~i~i~d~~-~~~~~-----~~ 145 (233)
+.|..||.. ++.............++++ |+++.++++ ..++.|.+||+. ..+.. ..
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 567777765 4443322222345668888 998766544 567899999976 33211 11
Q ss_pred eecC--ceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEE-EEeeCCCcEEEEecCC
Q 026765 146 RKFG--YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDISE 222 (233)
Q Consensus 146 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~~ 222 (233)
.... ..+..++++++|+++++...++.+.+|+..+++.+..+..+...+.+++++|+++.| ++...++.|..|++..
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 1111 346788999999988888888999999987677666666666788999999999955 5555678899999864
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=2.8e-12 Score=110.19 Aligned_cols=200 Identities=9% Similarity=-0.065 Sum_probs=127.8
Q ss_pred EEEEECcCCCEEEEEeCCCC-------------EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC-C
Q 026765 24 HSVAWNCTGTKLASGSVDQT-------------ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-K 89 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~~-------------v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~ 89 (233)
..++|+|||+.|+.++.|.. |++|++...........+...|...+..+.|+|++..++++...+ +
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 68999999999999999887 999998643221222223344666788999999986555444333 2
Q ss_pred --eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc---CCCcEEEEEcCCCee---eeeeec--CceeeEEEECC
Q 026765 90 --TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN---RDDELTILDVRKFKP---IHRRKF--GYEVNEIAWNM 159 (233)
Q Consensus 90 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~---~~~~~~--~~~~~~~~~~~ 159 (233)
.|.+||..++................+ +++..++... .++.|.+||+.+.+. ...... ...+..+.|+
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 666776655543332222233344445 5666433433 247899999876532 222222 3346777887
Q ss_pred CCCEEEEEeCCCeEEEEecC-CceeeeEEeee-cCceeEEEECCCCCEEE----EeeCCCcEEEEecCCcEE
Q 026765 160 TGEMFFLTTGNGTVEVLTYP-SLRPLDTVVAH-TAGCYCIAIDPMGRYFA----VGSADSLVSLWDISEMLC 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~-~~~v~~i~~~p~~~~la----s~s~dg~v~iwd~~~~~~ 225 (233)
++.++++...++..++|..+ +++....+..+ ...+..++++|+++.++ +....+.|++||+.+++.
T Consensus 329 ~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 329 GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 66777788889988888664 34444445444 45677888999998766 333457899999987753
No 197
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=1.8e-11 Score=97.23 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=76.7
Q ss_pred EEECCCCCeEEEEcC-----------CCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCc-
Q 026765 114 ITYKPDGTHIAVGNR-----------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL- 181 (233)
Q Consensus 114 ~~~~~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 181 (233)
++++|+++.+++... ...+.+||+.+.+.+.....+. +..++|+|+|++++++.. +.+.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~ 336 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE 336 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCc
Confidence 688999888776543 3479999999999888888777 999999999999988887 99999999999
Q ss_pred -eeeeEEeeecCceeEEEECCCCC
Q 026765 182 -RPLDTVVAHTAGCYCIAIDPMGR 204 (233)
Q Consensus 182 -~~~~~~~~~~~~v~~i~~~p~~~ 204 (233)
+.+..+..+......++++|+|+
T Consensus 337 l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceeeEEeccCCCCcEEEEecCCCC
Confidence 88888767778889999999985
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=5.8e-12 Score=109.01 Aligned_cols=203 Identities=14% Similarity=0.107 Sum_probs=124.6
Q ss_pred CccccEEEEEECcCCCEEEEEeCC-----CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC---
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVD-----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK--- 89 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D-----~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~--- 89 (233)
+|...+..++|||||++||.++.+ .+|++||+.... .....+ +...+..++|+|+ ..+ +.++.|+
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~---~~~~~~--~~~~~~~~~wspD-~~l-~~~~~~~~~~ 232 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK---PLADEL--KWVKFSGLAWLGN-DAL-LYSRFAEPKE 232 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC---EEEEEE--EEEESCCCEESTT-SEE-EEEECCCC--
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC---CCCccC--CCceeccEEEECC-CEE-EEEEecCccc
Confidence 344578899999999999887654 359999987532 111111 1112357899998 544 4455544
Q ss_pred -----------eEEEEECCCCeee--eeeeecC---CeeEEEECCCCCeEEEEcCCC-----cEEEEEcCCC--eeeeee
Q 026765 90 -----------TVRLWDARSGKCS--QQAELSG---ENINITYKPDGTHIAVGNRDD-----ELTILDVRKF--KPIHRR 146 (233)
Q Consensus 90 -----------~i~iwd~~~~~~~--~~~~~~~---~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~~~ 146 (233)
.|.+|++.++... ....... ....+.|+|||++|+....++ .+.+||+.+. +....+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence 3889998776522 1122211 256789999999988776543 7899998765 202222
Q ss_pred ec-CceeeEEEECCCCCEEEEEeC----CCeEEEEecCCc-eeeeEEe-eecCceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 147 KF-GYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSL-RPLDTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~-~~~~~~~-~~~~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
.. ....... +.++++.++..+. ++.+.+++.... .....+. .+...+..++++ ++.++++...|+..+||.
T Consensus 313 ~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 313 IPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred cCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 21 1122222 3478888877765 456888888764 2233333 344445677777 566788889999888876
Q ss_pred cC-CcEEEEee
Q 026765 220 IS-EMLCVRTF 229 (233)
Q Consensus 220 ~~-~~~~i~~~ 229 (233)
++ ++..++.+
T Consensus 391 ~~~~g~~~~~l 401 (741)
T 1yr2_A 391 FDLDGKPAGAV 401 (741)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCCceeec
Confidence 64 45555544
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.49 E-value=2.4e-10 Score=87.48 Aligned_cols=195 Identities=11% Similarity=0.015 Sum_probs=138.3
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
+...+.+++++++|...++...++.|..|+.. .......++.....+..+++++++ .++++...++.|.+||. +
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK----GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-T
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC----CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-C
Confidence 45679999999999988887778889999864 222333333345678899999865 67777767889999998 5
Q ss_pred Ceeeeeeee--cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeee-ee-cCceeeEEEECCCCCEEEEEeCCCeEE
Q 026765 99 GKCSQQAEL--SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RK-FGYEVNEIAWNMTGEMFFLTTGNGTVE 174 (233)
Q Consensus 99 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 174 (233)
++....... ...+..+++.++++.+++...++.+..||. +.+.... .. ....+..++++++++++++...++.+.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 443322111 234567899999987777777788999998 4433321 11 123477899999999877777788999
Q ss_pred EEecCCceeeeE-EeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 175 VLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
.++. +++.... +..+...+.+++++++|+.+++...++.|.+||..
T Consensus 208 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 208 RITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred EECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 9998 5443221 12234578899999999977777678899999984
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=2.6e-10 Score=95.53 Aligned_cols=205 Identities=11% Similarity=0.053 Sum_probs=139.5
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEc----CCCCCEEEEEeCCCeEEEEECC
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD----PKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
.+..+.|+|||+++++++.|+.|.+||+.......+. +++.. .....++|+ |++..++++.-.+++|.++|..
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~--~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA--EIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE--EEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE--EEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 5678999999999999999999999998521222222 33322 235688999 5876666666667999999998
Q ss_pred CCeeeeeeeecC------------CeeEEEECCCCCeEE-EEcCCCcEEEEEcCCCeee--eeeecCceeeEEEECCCCC
Q 026765 98 SGKCSQQAELSG------------ENINITYKPDGTHIA-VGNRDDELTILDVRKFKPI--HRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 98 ~~~~~~~~~~~~------------~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~ 162 (233)
+.+........+ ....+..++++..++ ....++.+.++|....+.. .....+.....+.|+++++
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 887766544321 234566777765544 4556689999998764322 2233344456788999999
Q ss_pred EEEEEe-CCCeEEEEecCCceeeeEEee-----ecCceeEEEECCCC-CEEEEee-CCCcEEEEecCC-------cEEEE
Q 026765 163 MFFLTT-GNGTVEVLTYPSLRPLDTVVA-----HTAGCYCIAIDPMG-RYFAVGS-ADSLVSLWDISE-------MLCVR 227 (233)
Q Consensus 163 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~-~~las~s-~dg~v~iwd~~~-------~~~i~ 227 (233)
+++++. .++.+.++|..+++....+.. |......+ ++|++ ..++++. .++.|.++|.++ .+.++
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 987765 578999999999887666543 32211112 57874 4455554 468999999987 55667
Q ss_pred eee
Q 026765 228 TFT 230 (233)
Q Consensus 228 ~~~ 230 (233)
++.
T Consensus 434 ~i~ 436 (567)
T 1qks_A 434 SFP 436 (567)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=2.5e-10 Score=88.08 Aligned_cols=204 Identities=11% Similarity=0.082 Sum_probs=132.7
Q ss_pred CccccEEEEEECcCC-CEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEEC
Q 026765 18 GHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~-~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~ 96 (233)
.+..---+..|++++ ..+++...++.|..|+.... .... + .....+.++++++++. ++++ . +..|.+||.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---~~~~--~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~ 80 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---QVQR--V-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNW 80 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC---CEEE--E-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEET
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC---cEEE--E-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEEC
Confidence 344455688999965 45666667899999997642 1222 2 2446789999999865 5544 3 568999999
Q ss_pred CCCeeeeeeeec-----CCeeEEEECCCCCeEEEEcCC---------CcEEEEEcCCC-eeeeeeecCceeeEEEECCCC
Q 026765 97 RSGKCSQQAELS-----GENINITYKPDGTHIAVGNRD---------DELTILDVRKF-KPIHRRKFGYEVNEIAWNMTG 161 (233)
Q Consensus 97 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~ 161 (233)
.+++........ .....++++|+|+.+++.... ....+|.+... +...........+.++|++++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTS
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCC
Confidence 887654333221 123468899999966654321 22345544322 221111112346789999999
Q ss_pred CEEEE-EeCCCeEEEEecC--Ccee-----eeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 162 EMFFL-TTGNGTVEVLTYP--SLRP-----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 162 ~~~~~-~~~~~~v~~~~~~--~~~~-----~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.+++ .+.++.+..|+.. +++. +..+..+...+..++++++|+++++...++.|.+||.++++.+.++.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 87655 4567899999873 3332 22222234567889999999988888888899999999888877764
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.45 E-value=4.4e-10 Score=89.56 Aligned_cols=201 Identities=13% Similarity=0.042 Sum_probs=122.4
Q ss_pred EEEECcCCCEEEEEe----------CCCCEEEEecccCCCCceeeEEEe--cC---cCcEEEEEEcCCCCCEEEEEeC-C
Q 026765 25 SVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELR--GH---ADSVDQLCWDPKHADLIATASG-D 88 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~----------~D~~v~vW~~~~~~~~~~~~~~~~--~h---~~~v~~~~~~~~~~~~l~sg~~-d 88 (233)
.++++|||++++.+. .++.|.+||.... ..+..+.+. .+ ...-..+.|+|++..++++... +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~--~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC--cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC
Confidence 899999999988875 3678999998532 222222222 00 1234578999987654444323 5
Q ss_pred CeEEEEECCCCeeeee-eeecCCe--------eEEEECCCCCeEEE----------------------------------
Q 026765 89 KTVRLWDARSGKCSQQ-AELSGEN--------INITYKPDGTHIAV---------------------------------- 125 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~l~~---------------------------------- 125 (233)
+.|.++| .+++.... ....+.. .-+.+.++++.++.
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 7899999 88876655 4332210 00112222222111
Q ss_pred ---EcCCCcEEEEEcCCCe--eeeeeec-----------CceeeEEEECCCCCEEEEEeC----------CCeEEEEecC
Q 026765 126 ---GNRDDELTILDVRKFK--PIHRRKF-----------GYEVNEIAWNMTGEMFFLTTG----------NGTVEVLTYP 179 (233)
Q Consensus 126 ---~~~d~~i~i~d~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~ 179 (233)
.+..+.+.+.|+.... .+..... ......+.++++++.+.+... .+.+.++|..
T Consensus 227 ~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~ 306 (373)
T 2mad_H 227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL 306 (373)
T ss_pred EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence 1122333344432211 0111100 011223678888888777643 3589999999
Q ss_pred CceeeeEEeeecCceeEEEECCCCC-EEEEee-CCCcEEEEecCCcEEEEee
Q 026765 180 SLRPLDTVVAHTAGCYCIAIDPMGR-YFAVGS-ADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 180 ~~~~~~~~~~~~~~v~~i~~~p~~~-~las~s-~dg~v~iwd~~~~~~i~~~ 229 (233)
+.+.+.++.. ......++|+|+|+ .++++. .++.|.|+|+++++.++++
T Consensus 307 t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 307 VGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9998888753 33578999999999 677776 5899999999999998874
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=1.4e-10 Score=93.61 Aligned_cols=197 Identities=13% Similarity=0.118 Sum_probs=131.2
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC--eEEEEECC
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK--TVRLWDAR 97 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~--~i~iwd~~ 97 (233)
-.....|+|+++++++++...++.|++||.+.. .+..+ ... ..... ++|+|++. .|+++..++ .|.+++..
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g---~~~~~-~~~-~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN---KVTTV-HPG-FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTT---EEEEE-EET-CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGG
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCC---EEEEe-ecc-CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcC
Confidence 346789999999998888888899999997532 22221 222 22233 89999864 556666655 78888876
Q ss_pred CCeeeeee----e-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee---ec-Ccee--e-EEEECCC-CCEE
Q 026765 98 SGKCSQQA----E-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR---KF-GYEV--N-EIAWNMT-GEMF 164 (233)
Q Consensus 98 ~~~~~~~~----~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~-~~~~--~-~~~~~~~-~~~~ 164 (233)
.+...... . .......++++|++..|+++..++.|..||+.+....... .. .... . .++++|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 55432222 1 1234456899996556666777888999998765422110 11 1112 2 8999995 5555
Q ss_pred EEEeCCCeEEEEecCCceeeeEEeeec---------------CceeEEEECCCCCEEEEee-CCCcEEEEecCCcEE
Q 026765 165 FLTTGNGTVEVLTYPSLRPLDTVVAHT---------------AGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLC 225 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~~~~~~~---------------~~v~~i~~~p~~~~las~s-~dg~v~iwd~~~~~~ 225 (233)
++-..++.|..|+.... ...+.++. .....++++|+|+++++-+ .++.|+.||+.++..
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 56667889999986532 33344432 3478899999999888888 889999999877763
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.42 E-value=1.1e-09 Score=83.84 Aligned_cols=195 Identities=12% Similarity=0.056 Sum_probs=138.2
Q ss_pred CccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
.....+.+++++++|+..++...++.|.+|+.. . ......+......+..+++++++ .++++...++.|..||..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~---~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G---RIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C---ceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC
Confidence 446688999999999988888788999999865 2 22333333444678899998865 566666667899999987
Q ss_pred CCeeeeeeee---cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeee-ee-cCceeeEEEECCCCCEEEEEeCCCe
Q 026765 98 SGKCSQQAEL---SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RK-FGYEVNEIAWNMTGEMFFLTTGNGT 172 (233)
Q Consensus 98 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (233)
++.. .... ...+..+++.++++.+++...++.+..+|.. .+.... .. ....+..+.+.++++.+++...++.
T Consensus 92 -g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 92 -GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp -SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 5442 2222 2345678899999888777778889999976 333221 11 2345788999999997777767888
Q ss_pred EEEEecCCceeeeE-EeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 173 VEVLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 173 v~~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
+..++. +++.... ...+...+..++++++++++++....+.|.+||..
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 999987 4433221 11234567899999999887777777889999983
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=1.2e-11 Score=98.53 Aligned_cols=148 Identities=14% Similarity=0.142 Sum_probs=108.8
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----------eeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEE
Q 026765 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGK-----------CSQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 136 (233)
.++.+++++.. .++++|+.+ .+.+|++...+ ......+.+ +..++| ++++|+++ .++.+.+||
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 57889999875 577888887 45669864322 112233455 778999 89999998 889999999
Q ss_pred cCCCeeeee-eecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcE
Q 026765 137 VRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLV 215 (233)
Q Consensus 137 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v 215 (233)
+++...... ..+...+..+.+.+. .+++...||.+.+|++.+..... +...|.|++|||+| ++.|..||++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 876543322 223345666665433 38888999999999998665432 45689999999999 7889999999
Q ss_pred EEEecCCcEE--EEee
Q 026765 216 SLWDISEMLC--VRTF 229 (233)
Q Consensus 216 ~iwd~~~~~~--i~~~ 229 (233)
++|+....++ .+++
T Consensus 185 ~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEF 200 (388)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEcCCCcccccccee
Confidence 9999987776 6666
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=1.7e-09 Score=83.60 Aligned_cols=207 Identities=12% Similarity=0.081 Sum_probs=132.7
Q ss_pred cceeeeCccccEEEEEECcCCC-EEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 12 HSREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 12 ~~~~~~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
..+.+..+........|+|+++ ++++...++.|..|+... ... .+..+...+..+++++++ +++++...++.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~~~--~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----TVD--VLLDATAFTNGNAVDAQQ-RLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----CEE--EEEESCSCEEEEEECTTS-CEEEEETTTTE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----CEE--EEeCCCCccceeeECCCC-CEEEEECCCCE
Confidence 3455666667778899999998 567777789999997631 222 334456678999999975 56665556688
Q ss_pred EEEEECCCCeeeeeeee-c----CCeeEEEECCCCCeEEE----EcC-------------CCcEEEEEcCCCeeeeeeec
Q 026765 91 VRLWDARSGKCSQQAEL-S----GENINITYKPDGTHIAV----GNR-------------DDELTILDVRKFKPIHRRKF 148 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~ 148 (233)
|.+||.. ++....... . ..+..++++|+|+.+++ |.. .+.|..+|..+.+..... .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 9999986 443222111 1 12345899999998776 332 245777776544332222 2
Q ss_pred CceeeEEEECCCCCEEEEEeCC------CeEEEEecCCceee--eEEe-eecCceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 149 GYEVNEIAWNMTGEMFFLTTGN------GTVEVLTYPSLRPL--DTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~--~~~~-~~~~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
....+.++|+++++.++++... +.+.+|+....... ..+. .....+..++++++|+++++. .+| |.+||
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~ 264 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFD 264 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEEC
T ss_pred CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEEC
Confidence 2245789999999987777654 78999987643311 1111 112334578999999955544 454 99999
Q ss_pred cCCcEEEEeee
Q 026765 220 ISEMLCVRTFT 230 (233)
Q Consensus 220 ~~~~~~i~~~~ 230 (233)
.. ++.+..+.
T Consensus 265 ~~-g~~~~~~~ 274 (305)
T 3dr2_A 265 SD-GQLLGHIP 274 (305)
T ss_dssp TT-SCEEEEEE
T ss_pred CC-CCEEEEEE
Confidence 84 66666553
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.38 E-value=3.6e-09 Score=80.92 Aligned_cols=195 Identities=10% Similarity=-0.019 Sum_probs=135.7
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
+...+.+++++++|...++...++.|.+|+.. . .............+..+++.+++ .++++...++.|..+|..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g---~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G---GFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-C---CeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-
Confidence 44678999999999988887778889998865 2 22333333344678899999865 576676668899999987
Q ss_pred Ceeeeeeee--cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee--cCceeeEEEECCCCCEEEEEeCCCeEE
Q 026765 99 GKCSQQAEL--SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTTGNGTVE 174 (233)
Q Consensus 99 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~ 174 (233)
++....... ...+..+++.++++.+++...++.+..+|. ..+...... ....+..+.++++++.+++....+.+.
T Consensus 134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 134 GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 544322111 234567899999986666666788999997 333322111 123477889999998877777788899
Q ss_pred EEecCCceeeeE-EeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 175 VLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
.++. +++.... +..+...+.+++++++|+.+++...++.|..||..
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 9987 3332221 22234568899999999977777677899999984
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=7.9e-10 Score=89.18 Aligned_cols=192 Identities=11% Similarity=0.052 Sum_probs=128.0
Q ss_pred EEECcCCCEEEEEeCCC--CEEEEecccCCCCceeeE-EEec-CcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCee
Q 026765 26 VAWNCTGTKLASGSVDQ--TARVWHIEPHGHGKVKDI-ELRG-HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (233)
Q Consensus 26 ~~~~~~~~~l~s~~~D~--~v~vW~~~~~~~~~~~~~-~~~~-h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~ 101 (233)
++|+++++.|+.++.++ .|.+|+..... ..... .+.. ....+.+++++|+++.+++ +..++.|..||..++..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~--~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGW--APTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTT--CEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCc--eeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE
Confidence 88999999999888876 56666654321 11111 1112 4456778999996555555 67788999999987653
Q ss_pred eee----eeec-CC-ee-EEEECCC-CCeEEEEcCCCcEEEEEcCCCeeeeeeec--------------CceeeEEEECC
Q 026765 102 SQQ----AELS-GE-NI-NITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRKF--------------GYEVNEIAWNM 159 (233)
Q Consensus 102 ~~~----~~~~-~~-~~-~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------~~~~~~~~~~~ 159 (233)
... .... .. +. .++++|+ +..+++...++.|..|+.........-.. -.....+++++
T Consensus 253 ~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 253 TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 222 1111 11 24 8999995 55555666778899998754311110000 02367899999
Q ss_pred CCCEEEEEe-CCCeEEEEecCCceeeeEEeee---------------cCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 160 TGEMFFLTT-GNGTVEVLTYPSLRPLDTVVAH---------------TAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 160 ~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------------~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
+|+++++-. .++.|+.|+..+++ +..+.++ -.....++++|++.++++-..++.|+.++++
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 999877877 89999999976665 3445554 2357899999998888888888889887753
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.35 E-value=4.7e-10 Score=90.46 Aligned_cols=194 Identities=9% Similarity=-0.006 Sum_probs=130.5
Q ss_pred cCCCEEEEEeC-C----CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe---------CCCeEEEEE
Q 026765 30 CTGTKLASGSV-D----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS---------GDKTVRLWD 95 (233)
Q Consensus 30 ~~~~~l~s~~~-D----~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~---------~d~~i~iwd 95 (233)
++++++..... + ++|.+.|..+. ..+..+.. -..+ .++++|++..++++.. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv~~I~v--G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RILGMTDG--GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEE--CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEEEEEEC--CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 45665544443 3 68999987642 22222222 2234 7999999876665542 467899999
Q ss_pred CCCCeeeeeeeec--------CCeeEEEECCCCCeEEEEcC--CCcEEEEEcCCCeeeeeeecCce--------------
Q 026765 96 ARSGKCSQQAELS--------GENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKFGYE-------------- 151 (233)
Q Consensus 96 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~-------------- 151 (233)
..+.+........ .....+.++|||++++++.. ++.+.++|+.+.+.+..+..+..
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMN 235 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEE
Confidence 9998877766553 23456899999999998764 57899999877665433322100
Q ss_pred --------------------------------------------------------------------------------
Q 026765 152 -------------------------------------------------------------------------------- 151 (233)
Q Consensus 152 -------------------------------------------------------------------------------- 151 (233)
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence
Q ss_pred --ee---EEEECCCCCEEEEEeC----------CCeEEEEecCCceeeeEEeeecCceeEEEECCCCC-EEEEee-CCCc
Q 026765 152 --VN---EIAWNMTGEMFFLTTG----------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGR-YFAVGS-ADSL 214 (233)
Q Consensus 152 --~~---~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~las~s-~dg~ 214 (233)
.. .+.++++++.+++... .+.+.++|..+.+.+.++.... ....++|+|+++ ++++.. .++.
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTE
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCe
Confidence 00 0344455555544432 3468888888877777765332 468899999999 887777 5899
Q ss_pred EEEEecCCcEEEEeee
Q 026765 215 VSLWDISEMLCVRTFT 230 (233)
Q Consensus 215 v~iwd~~~~~~i~~~~ 230 (233)
|.|+|+.+++.++++.
T Consensus 395 VsVID~~t~kvv~tI~ 410 (426)
T 3c75_H 395 LHIYDAATGEELRSVD 410 (426)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCCEEEEec
Confidence 9999999999999873
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=2e-09 Score=84.18 Aligned_cols=197 Identities=12% Similarity=0.036 Sum_probs=125.6
Q ss_pred cEEEEEECcCCC-EEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 22 KVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 22 ~V~~~~~~~~~~-~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
......|+|++. .+++...++.|..|+.... .... +. ....+.++++++++ +++++ ..+ .|.+||..+++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~~~~--~~-~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG---RKTV--HA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGV 120 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT---EEEE--EE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC---cEEE--EE-CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCCc
Confidence 456789999855 5566667889999987532 2222 22 34678999999875 45544 444 49999998776
Q ss_pred eeeeeeec-----CCeeEEEECCCCCeEEEEcC------CCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE-e
Q 026765 101 CSQQAELS-----GENINITYKPDGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-T 168 (233)
Q Consensus 101 ~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 168 (233)
........ .....+.++|+|+.+++... .+.|..++ ..+...........+.++|+++++.++.+ .
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 54322221 12456889999987665432 23455555 33322211111235789999999877655 4
Q ss_pred CCCeEEEEecC--Cc-ee-----eeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 169 GNGTVEVLTYP--SL-RP-----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 169 ~~~~v~~~~~~--~~-~~-----~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.++.+.+|+.. ++ +. +..+......+..++++++|+++++...++.|.+||. +++.++++.
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 57899999975 44 21 1112122345678999999998887777789999998 566666553
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=1.5e-09 Score=83.66 Aligned_cols=186 Identities=11% Similarity=0.039 Sum_probs=121.3
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE-Eec--CcCcEEEEEEcCCCCCEEEEEeC--------
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LRG--HADSVDQLCWDPKHADLIATASG-------- 87 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~-~~~--h~~~v~~~~~~~~~~~~l~sg~~-------- 87 (233)
+...+.+++++++|+++++. ++.|.+||.+.. ....+. ... ....++.++++|++ +++++...
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~ 125 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVL 125 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBC
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccc
Confidence 45679999999999966554 567888887532 222111 111 12347889999986 46554422
Q ss_pred -CCeEEEEECCC-CeeeeeeeecCCeeEEEECCCCCeEE-EEcCCCcEEEEEcC--CCeeee-----eee-cCceeeEEE
Q 026765 88 -DKTVRLWDARS-GKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVR--KFKPIH-----RRK-FGYEVNEIA 156 (233)
Q Consensus 88 -d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~--~~~~~~-----~~~-~~~~~~~~~ 156 (233)
...-.+|.+.. ++.............++|+|+++.++ +.+.++.|..||+. +..... ... ....+..++
T Consensus 126 ~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~ 205 (297)
T 3g4e_A 126 ERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC 205 (297)
T ss_dssp CTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE
T ss_pred cCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE
Confidence 12345555443 33222222223445699999998765 55667889999873 333211 111 123567889
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEEC-CCCCEEEEee
Q 026765 157 WNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID-PMGRYFAVGS 210 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~-p~~~~las~s 210 (233)
+.++|+++++...++.|..|+..+++.+..+..+...+++++|. |+++.|..++
T Consensus 206 ~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 206 IDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 99999988888888999999988888888887777789999998 8887654443
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.32 E-value=3.7e-10 Score=97.73 Aligned_cols=198 Identities=10% Similarity=0.030 Sum_probs=123.3
Q ss_pred EEEEECcCCCEEEEEeCCCC--------------EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC--
Q 026765 24 HSVAWNCTGTKLASGSVDQT--------------ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG-- 87 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~~--------------v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~-- 87 (233)
..++|+|| +.|+.++.|+. |++|++...........+...+...+..+.|+|++..+++++..
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57899999 99988887765 78888753221112222222344468899999987655444432
Q ss_pred --CCeEEEEECCCC--eeeeeeeec-CCeeEEEECCCCCeEEEEcCC----CcEEEEEcCCC--eeeeeeec-CceeeEE
Q 026765 88 --DKTVRLWDARSG--KCSQQAELS-GENINITYKPDGTHIAVGNRD----DELTILDVRKF--KPIHRRKF-GYEVNEI 155 (233)
Q Consensus 88 --d~~i~iwd~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~--~~~~~~~~-~~~~~~~ 155 (233)
...|.+||+.++ ++...+... ...... +.|++..|+..+.+ ..|.+||+.+. +....... ...+..+
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV 369 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE
Confidence 348999999876 312222222 222333 34889888877653 45899998764 22222222 2235566
Q ss_pred EECCCCCEEEEEeCCCeEEEEecC-CceeeeEEee-ecCceeEEEECCCCCEEE----EeeCCCcEEEEecCCcE
Q 026765 156 AWNMTGEMFFLTTGNGTVEVLTYP-SLRPLDTVVA-HTAGCYCIAIDPMGRYFA----VGSADSLVSLWDISEML 224 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~-~~~~v~~i~~~p~~~~la----s~s~dg~v~iwd~~~~~ 224 (233)
.+. ++.++++...++..++|..+ +++....+.. +...+..++++|+++.|+ +....+.|.+||+.+++
T Consensus 370 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 370 GIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 776 55667777788887777654 3444444543 355678899999987665 22345889999998876
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=1.7e-10 Score=99.24 Aligned_cols=198 Identities=13% Similarity=0.162 Sum_probs=121.2
Q ss_pred CccccEEEEEECcCCCEEEE-----EeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC---
Q 026765 18 GHKKKVHSVAWNCTGTKLAS-----GSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK--- 89 (233)
Q Consensus 18 ~H~~~V~~~~~~~~~~~l~s-----~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~--- 89 (233)
+|...+..++|||||++||- |+.+.+|++||+.... .....+.+. ....++|+ ++.. |+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~---~~~~~~~~~--k~~~~~Ws-Dg~~-l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ---PLETPLKDV--KFSGISWL-GNEG-FFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS---EEEEEEEEE--ESCCCEEE-TTTE-EEEEESSCCC-
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC---CCccccCCc--eeccEEEe-CCCE-EEEEEecCccc
Confidence 46667899999999999873 3334679999987532 121122211 12467899 7654 44555553
Q ss_pred ----------eEEEEECCCCeeee--eeeecC----CeeEEEECCCCCeEEEEcC----CCcEEEEEcCCCe-eeeeeec
Q 026765 90 ----------TVRLWDARSGKCSQ--QAELSG----ENINITYKPDGTHIAVGNR----DDELTILDVRKFK-PIHRRKF 148 (233)
Q Consensus 90 ----------~i~iwd~~~~~~~~--~~~~~~----~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~ 148 (233)
.|.+|++.++.... ...... ....+.++|||++|+.... ...+.++|+.+.. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 49999998765321 111111 2457889999998865433 2478999986542 1222221
Q ss_pred CceeeEEEECCCCCEEEEEeC----CCeEEEEecCCcee--eeEEeeecCceeEEEECCCCCEEEEeeCC-C--cEEEEe
Q 026765 149 GYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD-S--LVSLWD 219 (233)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~--~~~~~~~~~~v~~i~~~p~~~~las~s~d-g--~v~iwd 219 (233)
......-.++++++.++..+. ++.+..++...... ...+..|...+. .|+|++++|+....+ + .|++||
T Consensus 279 ~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 279 DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 111111125566666655443 36788888876543 345666776665 899999988776654 3 689999
Q ss_pred cCCcE
Q 026765 220 ISEML 224 (233)
Q Consensus 220 ~~~~~ 224 (233)
++.+.
T Consensus 357 ~~g~~ 361 (693)
T 3iuj_A 357 YEGKR 361 (693)
T ss_dssp TTSCE
T ss_pred CCCCe
Confidence 87543
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=1.1e-09 Score=84.80 Aligned_cols=194 Identities=12% Similarity=0.044 Sum_probs=124.2
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE--EecC-cCcEEEEEEcCCCCCEEEE----Ee
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE--LRGH-ADSVDQLCWDPKHADLIAT----AS 86 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~~l~s----g~ 86 (233)
..+..+.+.+..++++++|+++++...++.|.+|+.+ . ....+. ..+. ...+..++++|++ .++++ |.
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g---~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~ 153 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G---QAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGL 153 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S---CEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C---CEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCc
Confidence 3455566778999999999977766666889888864 1 121111 1111 1346678999875 56665 33
Q ss_pred C-------------CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCC------CcEEEEEcCCCeeeeeee
Q 026765 87 G-------------DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD------DELTILDVRKFKPIHRRK 147 (233)
Q Consensus 87 ~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~ 147 (233)
. .+.|..+|..+++..... .......++|+|+++.|+++... +.|..|++..........
T Consensus 154 ~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 154 RKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred cccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 2 245777777666544333 22344568999999987776554 689999986543111111
Q ss_pred ----cCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEE
Q 026765 148 ----FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSL 217 (233)
Q Consensus 148 ----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~i 217 (233)
.......+.+.++|+++++ ..+ .+.+|+. .++.+..+..+. .+..++|+|+++.|..++.++..++
T Consensus 233 ~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 233 FASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 1123457889999995544 444 5888886 456666665444 5889999999988888887654443
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=4.1e-09 Score=79.55 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=139.1
Q ss_pred eeeeCccc--cEEEEEECcCCCEEEEEeC--CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 14 REYTGHKK--KVHSVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 14 ~~~~~H~~--~V~~~~~~~~~~~l~s~~~--D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
+++. |.. ....++|++++...++.+. +++|++.|+.+.. ....+.+..+. ....+++. +..+.++.-.++
T Consensus 13 ~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~-fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 13 NEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSY-FGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTC-CEEEEEEE--TTEEEEEETTCS
T ss_pred EEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCc-ceEEEEEe--CCEEEEEEecCC
Confidence 4553 543 4689999998765566553 6789999986532 22333333322 22345554 445666777789
Q ss_pred eEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc------eeeEEEECCCCC
Q 026765 90 TVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY------EVNEIAWNMTGE 162 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~ 162 (233)
.+.++|..+.+....+... .... .+++|++.++++..++.+.++|..+.+.+.....+. ..+.+.|. ++.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~g~--glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKDGW--GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSSCC--EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCCCcEEEEEECCCCCeE--EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 9999999998887776655 4433 355678888777778899999999888776666432 25677777 675
Q ss_pred EEEEEeCCCeEEEEecCCceeeeEEeeec-------------CceeEEEECCCCC-EEEEeeCCCcEEEEecCCc
Q 026765 163 MFFLTTGNGTVEVLTYPSLRPLDTVVAHT-------------AGCYCIAIDPMGR-YFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~~ 223 (233)
.++..-.++.|.++|..+++.+..+.... ...+.|+++|+++ .++++...++|.+-++...
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 55555568899999999998888776321 2458999999986 5667778899988887643
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=1.6e-09 Score=85.22 Aligned_cols=198 Identities=13% Similarity=0.076 Sum_probs=130.7
Q ss_pred ccEEEEEECcCCCEEEEEe--CCCCEEEEecccCCCCceeeEEE-------ecCcCcEEEEEEcCCCCCEEEEEeC----
Q 026765 21 KKVHSVAWNCTGTKLASGS--VDQTARVWHIEPHGHGKVKDIEL-------RGHADSVDQLCWDPKHADLIATASG---- 87 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~--~D~~v~vW~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~sg~~---- 87 (233)
.....++++++|+.+++.. .++.++||.+. . +.. ..+ .+|...+..+++++++ +++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~--g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-Q--DGL--IPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-T--TEE--EESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHT
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-C--CCe--ecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcC
Confidence 6889999999999999864 24447788775 1 111 111 2345679999999875 45554433
Q ss_pred -CCeEEEEECCCCeeeeeeeecC-------CeeEEEECCCCCeE-EEEc---CCCcEEEEEcCCCeeeeeee--------
Q 026765 88 -DKTVRLWDARSGKCSQQAELSG-------ENINITYKPDGTHI-AVGN---RDDELTILDVRKFKPIHRRK-------- 147 (233)
Q Consensus 88 -d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l-~~~~---~d~~i~i~d~~~~~~~~~~~-------- 147 (233)
++.|.+||+.+++....+.... ....++++|++..+ ++.. .++.|.+||+.+.+......
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 5789999999888666554421 23568888865454 4444 57889999987544322110
Q ss_pred ----------------------cCceeeEEEECCCCCEEEEEeCCC-eEEEEecC---Cc-----eeee--EEeeecCce
Q 026765 148 ----------------------FGYEVNEIAWNMTGEMFFLTTGNG-TVEVLTYP---SL-----RPLD--TVVAHTAGC 194 (233)
Q Consensus 148 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~---~~-----~~~~--~~~~~~~~v 194 (233)
....++.++++++++.++.+...+ .+..++.. .. +... ...++....
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p 250 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC 250 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCC
Confidence 011357899999999888776654 55555432 10 0011 122444456
Q ss_pred eEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 195 YCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 195 ~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
..++++++|+++++...++.|.+||.++++
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 789999999999999999999999995565
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=6.1e-09 Score=81.37 Aligned_cols=183 Identities=13% Similarity=0.066 Sum_probs=117.4
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE-Ee-cC-cCcEEEEEEcCCCCCEEEEEeC------CCe
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE-LR-GH-ADSVDQLCWDPKHADLIATASG------DKT 90 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~-~~-~h-~~~v~~~~~~~~~~~~l~sg~~------d~~ 90 (233)
...+.+++|+++|+++++. . ..|.+||.... ....+. .. +. ...+..++++|++ +++++... .+.
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~ 162 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-D-DGLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGS 162 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEE
T ss_pred CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceE
Confidence 4679999999999887765 3 34888887532 222111 11 11 2357899999986 45554432 244
Q ss_pred EEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEE-cCCCcEEEEEcC--CC-ee-----eeeee-cCceeeEEEECCC
Q 026765 91 VRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDVR--KF-KP-----IHRRK-FGYEVNEIAWNMT 160 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~--~~-~~-----~~~~~-~~~~~~~~~~~~~ 160 (233)
|..+| +++.............++|+|+++.++.+ ..++.|.+||+. +. .. ..... ....+..+.+.++
T Consensus 163 l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~ 240 (326)
T 2ghs_A 163 IYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE 240 (326)
T ss_dssp EEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC
Confidence 55555 45433222222344578999999877544 556889999975 33 21 11111 1234677899999
Q ss_pred CCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEEC-CCCCEEEEeeC
Q 026765 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID-PMGRYFAVGSA 211 (233)
Q Consensus 161 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~-p~~~~las~s~ 211 (233)
|+++++...++.+..|+. +++.+..+..+...+.+++|+ |+++.|..++.
T Consensus 241 G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 241 GHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 998888777889999987 566666666666679999998 88877654443
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.24 E-value=5e-12 Score=100.72 Aligned_cols=187 Identities=10% Similarity=0.003 Sum_probs=102.1
Q ss_pred CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeecCC
Q 026765 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGE 110 (233)
Q Consensus 31 ~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~ 110 (233)
++..+++++.|+.|..||..+.. .. .++.. ..+.+..+..+ ..++++++.|+.|..||..+++..........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--~~--W~~~~--~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--IK--WTLKE--DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--EE--EEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EE--EEecC--CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 57899999999999999986532 12 23333 33333333344 34667778999999999988875443322110
Q ss_pred --ee-EEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEE
Q 026765 111 --NI-NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV 187 (233)
Q Consensus 111 --~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 187 (233)
.. ...+. ++..+++++.++.+..||..+++.+....... ....+|+++.+++++.++.+..||..+++..-.+
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 00 00111 34567778888999999998887765544322 2334568888999999999999999888766554
Q ss_pred eeecCceeEEEECCCC---CEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 188 VAHTAGCYCIAIDPMG---RYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 188 ~~~~~~v~~i~~~p~~---~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..+. .....++++. ..+++++.||.|..||.++++.+-++.
T Consensus 157 ~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 157 TYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred eccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 4321 1222333432 567778999999999999998876653
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=6.5e-09 Score=82.58 Aligned_cols=197 Identities=12% Similarity=0.073 Sum_probs=131.0
Q ss_pred EEEECcCCCEEEEEeC--CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-Cee
Q 026765 25 SVAWNCTGTKLASGSV--DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKC 101 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~~--D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~-~~~ 101 (233)
.++|+|||++|..+.. +++|.|+|+... ..+..+...+. ....|.+.+.+++.+.||.+.+.++.. ++.
T Consensus 141 ~~a~spDGk~lyVan~~~~~~VsVID~~t~--~vv~tI~v~g~------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 141 MTSLTPDGKTLLFYQFSPAPAVGVVDLEGK--AFKRMLDVPDC------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp GEEECTTSSEEEEEECSSSCEEEEEETTTT--EEEEEEECCSE------EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred eEEEcCCCCEEEEEEcCCCCeEEEEECCCC--cEEEEEECCCc------ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 4799999999887763 689999998653 22333333221 122355566777888999999999876 443
Q ss_pred eeeee--e--c-CCee-EEEE-CCCCCeEEEEcCCCcEEEEEcCCCe--eeeeee--------cC---ceeeEEEECCCC
Q 026765 102 SQQAE--L--S-GENI-NITY-KPDGTHIAVGNRDDELTILDVRKFK--PIHRRK--------FG---YEVNEIAWNMTG 161 (233)
Q Consensus 102 ~~~~~--~--~-~~~~-~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~--------~~---~~~~~~~~~~~~ 161 (233)
..... + . .... ...| .++|+.++ .+.++.+.+.|+.+.. ...... .+ .....+.+++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 22111 1 1 1111 2355 46776555 4557899999986543 222221 11 123347778898
Q ss_pred CEEEEEeC----------CCeEEEEecCCceeeeEEeeecCceeEEEECCCCC-EEEE-eeCCCcEEEEecCCcEEEEee
Q 026765 162 EMFFLTTG----------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGR-YFAV-GSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 162 ~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~las-~s~dg~v~iwd~~~~~~i~~~ 229 (233)
+.+.+... .+.+.++|..+.+.+..+... ..++.++++|+++ +|.+ ...++.|.|+|..+++.++++
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 88877643 357999999999988887643 3678999999996 5555 455899999999999999987
Q ss_pred ec
Q 026765 230 TK 231 (233)
Q Consensus 230 ~~ 231 (233)
+.
T Consensus 371 ~~ 372 (386)
T 3sjl_D 371 NQ 372 (386)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=2.8e-09 Score=84.50 Aligned_cols=200 Identities=12% Similarity=0.004 Sum_probs=122.4
Q ss_pred EEEECcCCCEEEEEe----------CCCCEEEEecccCCCCceeeEEEecC-----cCcEEEEEEcCCCCCEEEEEeC-C
Q 026765 25 SVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELRGH-----ADSVDQLCWDPKHADLIATASG-D 88 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~----------~D~~v~vW~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~sg~~-d 88 (233)
.++++||++++..+. .+++|.+||+.+.. .+..+.+.+- ......++++|++..++++... +
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 699999999988876 37899999987532 3333333211 1224567899987665544323 4
Q ss_pred CeEEE--EECCCCeeeeeeeecC--------CeeEEEECCC-------------------------------------CC
Q 026765 89 KTVRL--WDARSGKCSQQAELSG--------ENINITYKPD-------------------------------------GT 121 (233)
Q Consensus 89 ~~i~i--wd~~~~~~~~~~~~~~--------~~~~~~~~~~-------------------------------------~~ 121 (233)
..+.+ +|..+ .......+ ...-+.++++ +.
T Consensus 147 ~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~ 223 (368)
T 1mda_H 147 AAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPG 223 (368)
T ss_dssp CEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTT
T ss_pred CeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCC
Confidence 57888 88865 11111110 0000112222 22
Q ss_pred eEEEEcCCCcEEEEEcCCCe--eeeeeec--------Cce---eeEEEECCCCCEEEEEeC---------CCeEEEEecC
Q 026765 122 HIAVGNRDDELTILDVRKFK--PIHRRKF--------GYE---VNEIAWNMTGEMFFLTTG---------NGTVEVLTYP 179 (233)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~--~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~ 179 (233)
.++..+. +.+.+.|+.... .+..... +.. ...+.++++++.++++.. .+.+.++|..
T Consensus 224 ~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~ 302 (368)
T 1mda_H 224 MLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS 302 (368)
T ss_dssp EEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS
T ss_pred EEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECC
Confidence 2222233 556666664321 1111111 111 122789999998887643 2466799999
Q ss_pred CceeeeEEeeecCceeEEEECCCCCE-EEEee-CCCcEEEEecCCcEEEEeeec
Q 026765 180 SLRPLDTVVAHTAGCYCIAIDPMGRY-FAVGS-ADSLVSLWDISEMLCVRTFTK 231 (233)
Q Consensus 180 ~~~~~~~~~~~~~~v~~i~~~p~~~~-las~s-~dg~v~iwd~~~~~~i~~~~~ 231 (233)
+.+.+..+.... ....++++|+|++ +++.. .++.|.|+|+++++.++++..
T Consensus 303 t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 303 VGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp SCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred CCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 998888776544 5789999999984 56666 599999999999999998864
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=3.7e-09 Score=83.18 Aligned_cols=200 Identities=10% Similarity=0.027 Sum_probs=129.4
Q ss_pred eCccccEEEEEECcCCCEEEEEeC-----CCCEEEEecccCCCCceeeEEEec----CcCcEEEEEEcCCCCCEEEEEe-
Q 026765 17 TGHKKKVHSVAWNCTGTKLASGSV-----DQTARVWHIEPHGHGKVKDIELRG----HADSVDQLCWDPKHADLIATAS- 86 (233)
Q Consensus 17 ~~H~~~V~~~~~~~~~~~l~s~~~-----D~~v~vW~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~sg~- 86 (233)
.+|...+..+++++++++.++-.. +..|.+||+.... .+..+.+.. +......++++++++.++++..
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCc
Confidence 356788999999999887665433 5789999976321 122233321 2235688999886555666655
Q ss_pred --CCCeEEEEECCCCeeeeeeee-------------c-----------------CCeeEEEECCCCCeEEEEcCCC-cEE
Q 026765 87 --GDKTVRLWDARSGKCSQQAEL-------------S-----------------GENINITYKPDGTHIAVGNRDD-ELT 133 (233)
Q Consensus 87 --~d~~i~iwd~~~~~~~~~~~~-------------~-----------------~~~~~~~~~~~~~~l~~~~~d~-~i~ 133 (233)
.++.|.+||+.+++....... . .....++++|+++.|+.+...+ .+.
T Consensus 141 ~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 141 PDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp SGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred cCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence 678999999987654332210 0 1134589999999888776655 455
Q ss_pred EEEcC---CCee--------eeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeee--cCceeEEEEC
Q 026765 134 ILDVR---KFKP--------IHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAH--TAGCYCIAID 200 (233)
Q Consensus 134 i~d~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~i~~~ 200 (233)
.++.. .... +...........++++++|+++++...++.|.+|+..+++. ..+... ...+.+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~ 299 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFG 299 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEEC
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEEC
Confidence 55432 1100 00001111356789999999999999999999999845543 233222 3457899999
Q ss_pred CCCCEEEEeeCCCcEEEEe
Q 026765 201 PMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 201 p~~~~las~s~dg~v~iwd 219 (233)
++++++++.+..+.+.+|+
T Consensus 300 ~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 300 SDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp TTSCEEEEECCGGGSGGGB
T ss_pred CCCcEEEEeCccccccccc
Confidence 9999888887666665554
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=8.9e-08 Score=77.02 Aligned_cols=189 Identities=17% Similarity=0.177 Sum_probs=125.0
Q ss_pred cCCCEE-EEEeCCCCEEEEecccCCC-Cce-eeEE---Ee---cCcCcEEEEEEcCCCCCEEEEEeCC------CeEEEE
Q 026765 30 CTGTKL-ASGSVDQTARVWHIEPHGH-GKV-KDIE---LR---GHADSVDQLCWDPKHADLIATASGD------KTVRLW 94 (233)
Q Consensus 30 ~~~~~l-~s~~~D~~v~vW~~~~~~~-~~~-~~~~---~~---~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~iw 94 (233)
+++++| +++..+.+|.|.|+.+... .++ ..++ +. +.. .-..+...|++ +++++..+ +.|.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 777776 5566789999999853221 111 1111 10 111 22345566875 66777666 789999
Q ss_pred ECCCCeeeeeeeecC----CeeEEEECCCCCeEEEEc-------------------CCCcEEEEEcCCCeeeeeeecC--
Q 026765 95 DARSGKCSQQAELSG----ENINITYKPDGTHIAVGN-------------------RDDELTILDVRKFKPIHRRKFG-- 149 (233)
Q Consensus 95 d~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~-- 149 (233)
|..+.+....+.... ..+.+.|+|+++.+++.. .+.+|.+||+.+.+.+..+..+
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 999988877776442 234588899999888774 3688999999988777776664
Q ss_pred -ceeeEEEE--CCCCCEEEEEeC------CCeEEEEecCCce--eeeEE--eee----------------cCceeEEEEC
Q 026765 150 -YEVNEIAW--NMTGEMFFLTTG------NGTVEVLTYPSLR--PLDTV--VAH----------------TAGCYCIAID 200 (233)
Q Consensus 150 -~~~~~~~~--~~~~~~~~~~~~------~~~v~~~~~~~~~--~~~~~--~~~----------------~~~v~~i~~~ 200 (233)
.....+.| +|++++..++++ ++++.+|..+.++ ..+.+ ... ...+..|.+|
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23445555 999999888775 5677766554321 11111 110 2346789999
Q ss_pred CCCCEEEEeeC-CCcEEEEecC
Q 026765 201 PMGRYFAVGSA-DSLVSLWDIS 221 (233)
Q Consensus 201 p~~~~las~s~-dg~v~iwd~~ 221 (233)
|||++|..+.. .+.|.+||+.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEEEeCCCCEEEEEEec
Confidence 99999876665 6899999985
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=3.2e-08 Score=74.00 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=126.1
Q ss_pred eeeeCcc--ccEEEEEECcCCCEEEEEeCCC--CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 14 REYTGHK--KKVHSVAWNCTGTKLASGSVDQ--TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 14 ~~~~~H~--~~V~~~~~~~~~~~l~s~~~D~--~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
++|. |. .....|.|+ ++.+..|.+.+| .|++.|+.+.. ......+.... .--.++. .+..+.+..-.++
T Consensus 35 ~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~~~~-FgeGit~--~g~~ly~ltw~~~ 107 (262)
T 3nol_A 35 HSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--TLQQIELGKRY-FGEGISD--WKDKIVGLTWKNG 107 (262)
T ss_dssp EEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--EEEEEECCTTC-CEEEEEE--ETTEEEEEESSSS
T ss_pred EEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--EEEEEecCCcc-ceeEEEE--eCCEEEEEEeeCC
Confidence 4553 43 335788998 677778888776 89999986532 22333332211 1122343 3445666666789
Q ss_pred eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC---ce---eeEEEECCCCCE
Q 026765 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG---YE---VNEIAWNMTGEM 163 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~---~~~~~~~~~~~~ 163 (233)
.+.+||..+.+...++........++ +++..++....++.+.++|..+.+.+...... .+ ++.+.|. +|+.
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE
Confidence 99999999998888877766555555 56777777666788999999988877666542 22 4557775 6765
Q ss_pred EEEEeCCCeEEEEecCCceeeeEEeee------------cCceeEEEECCCCCEEEEee
Q 026765 164 FFLTTGNGTVEVLTYPSLRPLDTVVAH------------TAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~~~~~~~~~------------~~~v~~i~~~p~~~~las~s 210 (233)
++..-.++.|.++|..+++.+..+... ....+.||++|+++.|...+
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 554446889999999999887776531 12458999999887665555
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.15 E-value=2.8e-08 Score=74.37 Aligned_cols=179 Identities=15% Similarity=0.125 Sum_probs=124.8
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
.....|.|+ ++.+.++.+.++.|+++|+.+.. ..... +... ..--.+++ .+..+.+..-.++.+.+||..+.+
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk--v~~~~-l~~~-~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ--PVWME-RLGN-IFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS--CSEEE-ECTT-CCEEEEEE--CSSCEEEEESSSCEEEEEETTTTE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCc--EEeEE-CCCC-cceeEEEE--eCCEEEEEEccCCEEEEEECCcCc
Confidence 445788887 45667888888999999987533 22333 4332 11123444 345677777778999999999999
Q ss_pred eeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc------eeeEEEECCCCCEEEEEeCCCeEE
Q 026765 101 CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY------EVNEIAWNMTGEMFFLTTGNGTVE 174 (233)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~ 174 (233)
...++........++ +++..|+.+..++.+.++|..+.+.+....... .++.+.|. +|+.++..-.++.|.
T Consensus 128 ~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 128 RERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp EEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred EEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 888887766655555 567788777778899999999988776665422 34667776 676554444688999
Q ss_pred EEecCCceeeeEEeee-------------cCceeEEEECCCCCE-EEEe
Q 026765 175 VLTYPSLRPLDTVVAH-------------TAGCYCIAIDPMGRY-FAVG 209 (233)
Q Consensus 175 ~~~~~~~~~~~~~~~~-------------~~~v~~i~~~p~~~~-las~ 209 (233)
++|..+++.+..+... ..-.+.||++|+++. ++||
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999887776532 124589999997655 5555
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.14 E-value=6.2e-09 Score=89.50 Aligned_cols=196 Identities=10% Similarity=0.042 Sum_probs=120.1
Q ss_pred EEEEECcCCCEEEEEeCCCC-------------EEEEecccCCCCceeeEEEec-CcCcEEEEEEcCCCCCEEEEEeC--
Q 026765 24 HSVAWNCTGTKLASGSVDQT-------------ARVWHIEPHGHGKVKDIELRG-HADSVDQLCWDPKHADLIATASG-- 87 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~~-------------v~vW~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~sg~~-- 87 (233)
..++|+ ||+.|+.++.|.. |++|++...........+... |...+..+.|+|++..++++.+.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 577899 9999999888754 888887543222222222233 44557889999998766666543
Q ss_pred -CCeEEEEECCCCe-eeeeeeecC-CeeEEEECCCCCeEEEEc-CC---CcEEEEEcCCCee---eeeeecCceeeEEEE
Q 026765 88 -DKTVRLWDARSGK-CSQQAELSG-ENINITYKPDGTHIAVGN-RD---DELTILDVRKFKP---IHRRKFGYEVNEIAW 157 (233)
Q Consensus 88 -d~~i~iwd~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~~~-~d---~~i~i~d~~~~~~---~~~~~~~~~~~~~~~ 157 (233)
+..|.++|+.++. ....+.... ..... +++++..|+..+ .+ ..|..+|+.+... .........+. .|
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EE
Confidence 3589999987663 222222222 22222 566666665443 33 5688889876543 11122222232 78
Q ss_pred CCCCCEEEEEeC-CC--eEEEEecCCceeeeEEe-eecCceeEEEECCCCCEEEEeeCC----CcEEEEecCCcE
Q 026765 158 NMTGEMFFLTTG-NG--TVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFAVGSAD----SLVSLWDISEML 224 (233)
Q Consensus 158 ~~~~~~~~~~~~-~~--~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~las~s~d----g~v~iwd~~~~~ 224 (233)
+++++.++.... ++ .+.+|+.... ....+. .....+..++++|+++.|+....+ +.+..||+.+++
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 888988877654 43 6777777643 333333 233456677788888876655444 789999998765
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.13 E-value=1.6e-08 Score=76.24 Aligned_cols=160 Identities=9% Similarity=0.028 Sum_probs=115.4
Q ss_pred cEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEE-cCCCcEEEEEcCCCeeee
Q 026765 68 SVDQLCWDPKHADLIATASG--DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDVRKFKPIH 144 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~ 144 (233)
....+.|++++ .++++.+. ++.|++.|+.+++...............+.+++..+... -.++.+.++|..+.+.+.
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence 35789999874 55555543 679999999999988776655433332333345565544 456889999999988887
Q ss_pred eeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec-----CceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 145 RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
....+ ......++++++.++++..++.+.++|..+.+....+.... ..++.+.|. +++.++....++.|.+-|
T Consensus 101 ~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 101 NFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp EEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 77655 12233455688888888889999999999888877766332 135678887 676666665788999999
Q ss_pred cCCcEEEEeee
Q 026765 220 ISEMLCVRTFT 230 (233)
Q Consensus 220 ~~~~~~i~~~~ 230 (233)
.++++.+.++.
T Consensus 179 ~~tg~V~~~I~ 189 (266)
T 2iwa_A 179 AKDGTLLGWIL 189 (266)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999988875
No 227
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.10 E-value=3.1e-07 Score=73.12 Aligned_cols=115 Identities=8% Similarity=-0.035 Sum_probs=75.7
Q ss_pred EECcCCCEEEEEeC--CC---CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe---------CCCeEE
Q 026765 27 AWNCTGTKLASGSV--DQ---TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS---------GDKTVR 92 (233)
Q Consensus 27 ~~~~~~~~l~s~~~--D~---~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~---------~d~~i~ 92 (233)
...|++.++..+.. .. +|.++|..... .. .+++.-..+ .++++|++..+.++.. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~---~~-~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGS---IL-GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCe---EE-EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 34467777666543 22 78899876422 11 233322233 8899998765544432 367899
Q ss_pred EEECCCCeeeeeeeec--------CCeeEEEECCCCCeEEEEcC--CCcEEEEEcCCCeeeee-eec
Q 026765 93 LWDARSGKCSQQAELS--------GENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHR-RKF 148 (233)
Q Consensus 93 iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~ 148 (233)
+||..+.+........ .....+.++|||++++++.. ++.|.++| .+.+.+.. ...
T Consensus 101 viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred EEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC
Confidence 9999887766655443 23456899999999998764 47899999 88877665 443
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.08 E-value=2.7e-08 Score=82.54 Aligned_cols=189 Identities=15% Similarity=0.089 Sum_probs=129.3
Q ss_pred cCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEecCcCcEEEEEE-c-CCCCCEEEEE-----------------eCCC
Q 026765 30 CTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D-PKHADLIATA-----------------SGDK 89 (233)
Q Consensus 30 ~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~~l~sg-----------------~~d~ 89 (233)
+||+++..... +..|.+-|+.... ....++++. ......+++ . |++..+++++ -.++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK--CDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE--EEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce--EeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 47888766554 5668888876432 222234432 234667777 4 7765444332 3356
Q ss_pred eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCC--------------------------------------c
Q 026765 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD--------------------------------------E 131 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------------------------------~ 131 (233)
.+.+.|..+.+...+....+....++++|+|+++++.+.+. .
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 89999999888777777766666789999999998887553 3
Q ss_pred EEEEEcCC--Cee-eeeeecCceeeEEEECCCCCEEEEEe-CCCeEEEEecCCce------------eeeEEeeecCcee
Q 026765 132 LTILDVRK--FKP-IHRRKFGYEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSLR------------PLDTVVAHTAGCY 195 (233)
Q Consensus 132 i~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~------------~~~~~~~~~~~v~ 195 (233)
+.+.|.++ .+. +..+..+....++.++|||+++++++ .++++.++|..+.+ ....+. -+....
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 56666665 333 33444455667899999999988776 57999999997542 122222 234678
Q ss_pred EEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 196 CIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 196 ~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
.++|+|+|....+.-.|+.|.+||++.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999999995456677899999999987
No 229
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=3e-07 Score=68.14 Aligned_cols=187 Identities=15% Similarity=0.132 Sum_probs=125.7
Q ss_pred eeeeCcc--ccEEEEEECcCCCEEEEEeCCC--CEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 14 REYTGHK--KKVHSVAWNCTGTKLASGSVDQ--TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 14 ~~~~~H~--~~V~~~~~~~~~~~l~s~~~D~--~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
++| .|. +....+.|+. +.+..|.+.+| .|++.|+.+.. ......+..+.- --.++. .+.++....-.++
T Consensus 13 ~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--v~~~~~l~~~~f-geGi~~--~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 13 KRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--ILQRAEVPPPYF-GAGIVA--WRDRLIQLTWRNH 85 (243)
T ss_dssp EEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--EEEEEECCTTCC-EEEEEE--ETTEEEEEESSSS
T ss_pred EEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--EEEEEeCCCCcc-eeEEEE--eCCEEEEEEeeCC
Confidence 456 354 4467899986 56667777654 89999986532 223333333221 122333 3456666677789
Q ss_pred eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecC------ceeeEEEECCCCCE
Q 026765 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG------YEVNEIAWNMTGEM 163 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 163 (233)
.+.+||..+.+...++........++ +++..|+++..++.|.++|..+.+.+...... ..++.+.|. +|+.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 99999999999888887766666665 46677776667889999999988877666543 134566665 6665
Q ss_pred EEEEeCCCeEEEEecCCceeeeEEeee-------------cCceeEEEECCCCCEEEEee
Q 026765 164 FFLTTGNGTVEVLTYPSLRPLDTVVAH-------------TAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------~~~v~~i~~~p~~~~las~s 210 (233)
++..-.+..|.++|..+++.+..+... ..-.+.||++|+++.|...+
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 544446889999999999887776522 12458899999876655444
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=1.1e-06 Score=66.28 Aligned_cols=204 Identities=9% Similarity=0.006 Sum_probs=127.1
Q ss_pred ccEEEEEECcCCCEEEE-EeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKLAS-GSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s-~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
.....++|++++..|.. -..++.|.+++++... .. ............+++++.++.++++-...+.|.++++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~-~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cE-EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 45679999997766554 4457889888875321 11 1222222467889999876667677677789999998654
Q ss_pred eeeeeeeec-CCeeEEEECCCCCeEEEEcC---CCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE-eCCCeE
Q 026765 100 KCSQQAELS-GENINITYKPDGTHIAVGNR---DDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTV 173 (233)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~v 173 (233)
......... ..+..++++|++..+..+.. .+.|..+++........... ......++++++++.+..+ ...+.|
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 322222112 34567899997666554443 36788888754221111111 1346789999987666555 567899
Q ss_pred EEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 174 EVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..++.........+. .......++.. .+..+++...++.|.++|..+++.++++.
T Consensus 192 ~~~~~~g~~~~~~~~-~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 192 ECLNPAQPGRRKVLE-GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEETTEEEEEEEEE-CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EEEecCCCceEEEec-CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 999986433222222 22344567665 34445555566899999999998888764
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=5.2e-08 Score=72.88 Aligned_cols=158 Identities=14% Similarity=0.128 Sum_probs=115.9
Q ss_pred cEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcCCCeeee
Q 026765 68 SVDQLCWDPKHADLIATASGDK--TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN-RDDELTILDVRKFKPIH 144 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~ 144 (233)
....+.|+ + +.++.|.+.+| .|+++|+.+++.................+++..+.... .++.+.++|..+.+.+.
T Consensus 44 ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 35788887 4 46777777766 89999999999888777666554433334455665444 57889999999998887
Q ss_pred eeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec-----CceeEEEECCCCCEEEEeeCCCcEEEEe
Q 026765 145 RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLWD 219 (233)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~i~~~p~~~~las~s~dg~v~iwd 219 (233)
....+.+-..++ ++++.++.+.+++.+.++|..+.+...++.... ..++.+.|. +|+.+|..-.+..|.+.|
T Consensus 122 ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 122 SFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 777654333333 577888888888999999999888887766432 234567776 676666665788999999
Q ss_pred cCCcEEEEeee
Q 026765 220 ISEMLCVRTFT 230 (233)
Q Consensus 220 ~~~~~~i~~~~ 230 (233)
.++++.+.++.
T Consensus 199 p~tG~V~~~Id 209 (262)
T 3nol_A 199 PETGKVTGIID 209 (262)
T ss_dssp TTTCBEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999988765
No 232
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=2.6e-08 Score=79.14 Aligned_cols=146 Identities=12% Similarity=0.060 Sum_probs=103.0
Q ss_pred EEcCCCCCEEEEEeC----CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc----------CCCcEEEEEcC
Q 026765 73 CWDPKHADLIATASG----DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN----------RDDELTILDVR 138 (233)
Q Consensus 73 ~~~~~~~~~l~sg~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~ 138 (233)
...|++..++++-.. ++.|.+.|..+.+....+....... ++++||+++++++. .++.+.+||..
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 345665544444332 6799999999998887777655554 99999999988765 35779999999
Q ss_pred CCeeeeeeecC--------ceeeEEEECCCCCEEEEEeC--CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEE
Q 026765 139 KFKPIHRRKFG--------YEVNEIAWNMTGEMFFLTTG--NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAV 208 (233)
Q Consensus 139 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las 208 (233)
+.+.+..+..+ .....+.++|+|++++++.. ++.+.++|..+.+.+.++.... . ...+....+.+++
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFM 194 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEE
Confidence 98887766543 24667999999999988864 6899999999999888775321 1 1112222345556
Q ss_pred eeCCCcEEEEecCC
Q 026765 209 GSADSLVSLWDISE 222 (233)
Q Consensus 209 ~s~dg~v~iwd~~~ 222 (233)
.+.||++.+.++..
T Consensus 195 ~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 195 HCRDGSLAKVAFGT 208 (386)
T ss_dssp EETTSCEEEEECCS
T ss_pred ECCCCCEEEEECCC
Confidence 66666666666654
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.02 E-value=6.2e-08 Score=72.51 Aligned_cols=157 Identities=11% Similarity=0.002 Sum_probs=115.9
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEE-EEcCCCcEEEEEcCCCeeeeee
Q 026765 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVRKFKPIHRR 146 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~ 146 (233)
....+.|+. ..++.+.+.++.|+++|+.+++..... +....+.....++++.|. +.-.++.+.+||..+.+.+...
T Consensus 56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 357888863 567888899999999999999987777 665544422233444444 4556788999999999988877
Q ss_pred ecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec--C---ceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 147 KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT--A---GCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~---~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
....+-..++ ++++.++.+.+++.+.++|..+.+.+.++.... . .++.+.|. +|+.+|..-.+..|.+-|.+
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 7654433444 568888888889999999999988887766432 2 34566776 67666665578899999999
Q ss_pred CcEEEEeee
Q 026765 222 EMLCVRTFT 230 (233)
Q Consensus 222 ~~~~i~~~~ 230 (233)
+++.+.++.
T Consensus 210 TG~V~~~Id 218 (268)
T 3nok_A 210 TGTVVGVID 218 (268)
T ss_dssp TCBEEEEEE
T ss_pred CCcEEEEEE
Confidence 999988764
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.96 E-value=2.1e-10 Score=91.26 Aligned_cols=145 Identities=10% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc--eeeE-E
Q 026765 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY--EVNE-I 155 (233)
Q Consensus 79 ~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~-~ 155 (233)
...+++++.|+.|..||..+++....... +...+..+..++..+++++.|+.+..||..+++.+....... .+.. .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 35778899999999999999987766655 444444455677778888899999999997766544332211 0100 0
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.. ..+..+++++.++.+..||..+++.+..+..+. ...++|++..+++++.|+.|+.||.++++.+-++
T Consensus 88 ~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 88 CR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred eE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 01 134567778889999999999888876665443 2456678889999999999999999998876554
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=5e-07 Score=66.96 Aligned_cols=159 Identities=14% Similarity=0.143 Sum_probs=115.7
Q ss_pred CcEEEEEEcCCCCCEEEEEeCC--CeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEE-EEcCCCcEEEEEcCCCeee
Q 026765 67 DSVDQLCWDPKHADLIATASGD--KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVRKFKPI 143 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l~sg~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~ 143 (233)
..+..+.|++ ..++.|.+.+ ..|+++|+.+++.................+.+..+. +.-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3467889975 4566777775 489999999999888777665554433333445554 4456788999999999988
Q ss_pred eeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec-----CceeEEEECCCCCEEEEeeCCCcEEEE
Q 026765 144 HRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLW 218 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~i~~~p~~~~las~s~dg~v~iw 218 (233)
.....+.+-..++ ++++.++++.+++.+.++|..+.+.+.++.... ..++.+.+. +|+.+|..-.+..|.+-
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 8777654434444 567888888889999999999988887776432 234566665 66666655567899999
Q ss_pred ecCCcEEEEeee
Q 026765 219 DISEMLCVRTFT 230 (233)
Q Consensus 219 d~~~~~~i~~~~ 230 (233)
|.++++.+..+.
T Consensus 176 Dp~tG~V~~~id 187 (243)
T 3mbr_X 176 DPASGKVVAWID 187 (243)
T ss_dssp CTTTCBEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999999988765
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.95 E-value=4.9e-07 Score=72.78 Aligned_cols=183 Identities=12% Similarity=0.076 Sum_probs=117.0
Q ss_pred EEEEECcCCCEEEEEeCC------CCEEEEecccCCCCceeeEEEecCc-CcEEEEEEcCCCCCEEEEEe----------
Q 026765 24 HSVAWNCTGTKLASGSVD------QTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATAS---------- 86 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D------~~v~vW~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~sg~---------- 86 (233)
..+...|+| .++|+..| +.|.+.|..+.. .+..++..+.. ..-+.+.|+|++ +.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTC
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe--EEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccc
Confidence 445667899 77777655 788898876422 22222222222 234568889986 4666664
Q ss_pred ---------CCCeEEEEECCCCeeeeeeeecC---CeeEEEE--CCCCCeEEEEcC------CCcEEEEEcCCCee--ee
Q 026765 87 ---------GDKTVRLWDARSGKCSQQAELSG---ENINITY--KPDGTHIAVGNR------DDELTILDVRKFKP--IH 144 (233)
Q Consensus 87 ---------~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~--~~~~~~l~~~~~------d~~i~i~d~~~~~~--~~ 144 (233)
...+|.+||+.+++..+.+.... ....+.| +|+++++.++.+ ++.|.+|.....+. ..
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 36899999999887777766642 2334545 999999887775 45676654332211 01
Q ss_pred ee--e------------c-----CceeeEEEECCCCCEEEEEeC-CCeEEEEecCC---ceeeeEEeeecC---------
Q 026765 145 RR--K------------F-----GYEVNEIAWNMTGEMFFLTTG-NGTVEVLTYPS---LRPLDTVVAHTA--------- 192 (233)
Q Consensus 145 ~~--~------------~-----~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~---~~~~~~~~~~~~--------- 192 (233)
.+ . . +.....+.++++|+++.++.. .+.|.+|+... .+.+..+...+.
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G 376 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAG 376 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTS
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccc
Confidence 00 0 0 123567899999999988865 78999999742 344444433211
Q ss_pred -----ceeEEEECCCCCEEEEee
Q 026765 193 -----GCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 193 -----~v~~i~~~p~~~~las~s 210 (233)
....++++|+|++|.++.
T Consensus 377 ~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 377 HKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccCCCCCCEEEEcCCCCEEEEEc
Confidence 357899999999988887
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.89 E-value=3.8e-06 Score=65.25 Aligned_cols=209 Identities=9% Similarity=0.011 Sum_probs=126.4
Q ss_pred eeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEec------------------CcCcEEEEEEcCC
Q 026765 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRG------------------HADSVDQLCWDPK 77 (233)
Q Consensus 16 ~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~------------------h~~~v~~~~~~~~ 77 (233)
+.+.-..-.+++|+++++++.++..++.|..|+.... ......... .......+++.++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS---GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTT---CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCC---ceEEEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 4443344567889999998888888999988876431 122111110 0124678899873
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeeeee-ec----CCeeEEEECC-CCCeEEEEcC-----------------CCcEEE
Q 026765 78 HADLIATASGDKTVRLWDARSGKCSQQAE-LS----GENINITYKP-DGTHIAVGNR-----------------DDELTI 134 (233)
Q Consensus 78 ~~~~l~sg~~d~~i~iwd~~~~~~~~~~~-~~----~~~~~~~~~~-~~~~l~~~~~-----------------d~~i~i 134 (233)
+++++ .+...+.|..+|..++....... .. .....+++.+ +|+..++... ++.+..
T Consensus 91 ~g~l~-v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLY-IVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEE-EEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEE-EEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 34454 44445558888876553222111 11 1245688999 8876665432 356888
Q ss_pred EEcCCCeeeeeeecCceeeEEEECCCCCEEEEE-eCCCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeC
Q 026765 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSA 211 (233)
Q Consensus 135 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~ 211 (233)
+|..+.+...........+.++++++++.++++ ..++.|..++..... ....+..... ...++++++|+++++...
T Consensus 170 ~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred EeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 887655432221112345678999999866655 567899999876321 1111221222 678999999987766544
Q ss_pred ----------CCcEEEEecCCcEEEEeee
Q 026765 212 ----------DSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 212 ----------dg~v~iwd~~~~~~i~~~~ 230 (233)
.+.|..+|.. ++.+..|.
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~ 276 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF-GNILEVIP 276 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT-SCEEEEEE
T ss_pred cccccccCCCccEEEEECCC-CCEEEEEE
Confidence 4678888874 66666654
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=4e-07 Score=78.00 Aligned_cols=158 Identities=15% Similarity=0.145 Sum_probs=111.4
Q ss_pred EEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeeeeeeeecC----------CeeEEEECCCC-
Q 026765 71 QLCWDPKHADLIATASGDK-------------------TVRLWDARSGKCSQQAELSG----------ENINITYKPDG- 120 (233)
Q Consensus 71 ~~~~~~~~~~~l~sg~~d~-------------------~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~- 120 (233)
.++++|++ .+++.+..++ .|..+|..+++..-.+.... ...-+....+|
T Consensus 247 ~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 46777765 4666666554 58999999998765544321 11222333466
Q ss_pred --CeEEEEcCCCcEEEEEcCCCeeeeeeecCc------------e------------------------eeEEEECCCCC
Q 026765 121 --THIAVGNRDDELTILDVRKFKPIHRRKFGY------------E------------------------VNEIAWNMTGE 162 (233)
Q Consensus 121 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------~------------------------~~~~~~~~~~~ 162 (233)
..++.+..+|.+.++|.++++.+....... . ...++++|+..
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 578889999999999999888765544221 0 12467788888
Q ss_pred EEEEEeC-------------------------------------------CCeEEEEecCCceeeeEEeeecCceeEEEE
Q 026765 163 MFFLTTG-------------------------------------------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAI 199 (233)
Q Consensus 163 ~~~~~~~-------------------------------------------~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~ 199 (233)
++++... .|.+..||..+++..-.+. +..++....+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~ 484 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTL 484 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcce
Confidence 8777543 2789999999988776654 4444555556
Q ss_pred CCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 200 DPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 200 ~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
...+..++.++.||.+++||+++++.+.+|.
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 6678888889999999999999999998885
No 239
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.87 E-value=1.3e-07 Score=76.34 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=82.7
Q ss_pred CeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc----------CCCcEEEEEcCCCeeeeeeecC--------c
Q 026765 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN----------RDDELTILDVRKFKPIHRRKFG--------Y 150 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~--------~ 150 (233)
+.|.++|..+.+....+...... .++++||+++++++. .++.|.++|..+.+.+..+..+ .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 79999999999988888777666 899999999988776 3678999999998887766543 2
Q ss_pred eeeEEEECCCCCEEEEEeC--CCeEEEEecCCceeeeEEee
Q 026765 151 EVNEIAWNMTGEMFFLTTG--NGTVEVLTYPSLRPLDTVVA 189 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~ 189 (233)
....+.++|+|++++++.. ++.+.++|..+.+.+..+..
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 4567899999999998864 68999999999888877653
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.83 E-value=6.4e-06 Score=62.11 Aligned_cols=158 Identities=10% Similarity=0.028 Sum_probs=100.7
Q ss_pred CcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCeEE-EEcCCCcEEEEEcCCCeeee
Q 026765 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIA-VGNRDDELTILDVRKFKPIH 144 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~ 144 (233)
.....++|++.++.++++-..++.|..+|+..+......... ..+..++++|++..+. +....+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 356789999876677777777889999998765432222111 3456789998765555 44556789999986432211
Q ss_pred eeecC-ceeeEEEECCCCCEEEEEeC---CCeEEEEecCCceeeeEEe-eecCceeEEEECCCCCEE-EEeeCCCcEEEE
Q 026765 145 RRKFG-YEVNEIAWNMTGEMFFLTTG---NGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYF-AVGSADSLVSLW 218 (233)
Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~l-as~s~dg~v~iw 218 (233)
....+ .....+++++++..+..+.. .+.+..++.+. .....+. ........++++|++..| ++-...+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 12222 34678899997666555543 46787777643 2222221 222456889999987665 555566889999
Q ss_pred ecCCcEE
Q 026765 219 DISEMLC 225 (233)
Q Consensus 219 d~~~~~~ 225 (233)
|++....
T Consensus 195 ~~~g~~~ 201 (267)
T 1npe_A 195 NPAQPGR 201 (267)
T ss_dssp ETTEEEE
T ss_pred ecCCCce
Confidence 9985443
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.78 E-value=4.8e-07 Score=77.55 Aligned_cols=183 Identities=12% Similarity=0.032 Sum_probs=120.2
Q ss_pred EEEEECcCCCEEEEEeCCC-------------------CEEEEecccCCCCceeeEEEecCc-------CcEEEEEEcCC
Q 026765 24 HSVAWNCTGTKLASGSVDQ-------------------TARVWHIEPHGHGKVKDIELRGHA-------DSVDQLCWDPK 77 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~-------------------~v~vW~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~ 77 (233)
..++++|++..++.+..++ +|..+|..+.. .....+...|. .....+....+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~--~~W~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGK--YKWHYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC--EEEEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCC--EEEEEecCCCcccccccCCCcEEEecccC
Confidence 3578889998888777654 47777765422 22222322231 11222222223
Q ss_pred CC--CEEEEEeCCCeEEEEECCCCeeeeeeeecCCe------------------------------------eEEEECCC
Q 026765 78 HA--DLIATASGDKTVRLWDARSGKCSQQAELSGEN------------------------------------INITYKPD 119 (233)
Q Consensus 78 ~~--~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~ 119 (233)
+. ..++.++.+|.+.++|..+++........... ..++++|+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 32 57889999999999999999875543321100 13678888
Q ss_pred CCeEEEEcC-------------------------------------------CCcEEEEEcCCCeeeeeeecCceeeEEE
Q 026765 120 GTHIAVGNR-------------------------------------------DDELTILDVRKFKPIHRRKFGYEVNEIA 156 (233)
Q Consensus 120 ~~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 156 (233)
...+++... .+.|..||+.+.+.+...+.+.+.....
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~ 483 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGT 483 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcc
Confidence 888776533 1679999999998887777655555555
Q ss_pred ECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec-CceeEEEECCCCCE-EEE
Q 026765 157 WNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-AGCYCIAIDPMGRY-FAV 208 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~i~~~p~~~~-las 208 (233)
+...+..++.++.+|.+++||..+++.+.++.... ....-+.|.++|+. +++
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 56678888889999999999999999988876433 22344667778864 444
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=4.1e-07 Score=75.57 Aligned_cols=196 Identities=16% Similarity=0.170 Sum_probs=128.7
Q ss_pred ccEEEEEE-C-cCCCEEEEEe------------------CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCC
Q 026765 21 KKVHSVAW-N-CTGTKLASGS------------------VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80 (233)
Q Consensus 21 ~~V~~~~~-~-~~~~~l~s~~------------------~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 80 (233)
.....+++ + |++++++.++ .++.|.+.|.++ .....++...+. -..++++|++.
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t--~~v~~qI~Vgg~---pd~~~~spdGk- 207 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK--WEVAWQVLVSGN---LDNCDADYEGK- 207 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT--TEEEEEEEESSC---CCCEEECSSSS-
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCC--CeEEEEEEeCCC---ccceEECCCCC-
Confidence 34778887 5 8999987774 345778877753 222333333332 23456778754
Q ss_pred EEEEEeCCC--------------------------------------eEEEEECCC--Cee-eeeeeecCCeeEEEECCC
Q 026765 81 LIATASGDK--------------------------------------TVRLWDARS--GKC-SQQAELSGENINITYKPD 119 (233)
Q Consensus 81 ~l~sg~~d~--------------------------------------~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~ 119 (233)
++++.+.+. .|.|.|.++ ++. ..........-.+.++||
T Consensus 208 ~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPD 287 (595)
T 1fwx_A 208 WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPD 287 (595)
T ss_dssp EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTT
T ss_pred EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCC
Confidence 444555432 366777766 333 344555556667999999
Q ss_pred CCeEEEEc-CCCcEEEEEcCCCe------------eeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCC------
Q 026765 120 GTHIAVGN-RDDELTILDVRKFK------------PIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPS------ 180 (233)
Q Consensus 120 ~~~l~~~~-~d~~i~i~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 180 (233)
|+++++++ .+..+.++|+.+.+ .+.....+.....++|+++|..+++.--++++..|++..
T Consensus 288 Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~ 367 (595)
T 1fwx_A 288 KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYA 367 (595)
T ss_dssp SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhc
Confidence 99887665 56889999998653 233455567788999999995455566799999999865
Q ss_pred ----ceeeeEEeeecCce-----eEEEECCCCCEEEEeeC---CCcE----------EEEecCC
Q 026765 181 ----LRPLDTVVAHTAGC-----YCIAIDPMGRYFAVGSA---DSLV----------SLWDISE 222 (233)
Q Consensus 181 ----~~~~~~~~~~~~~v-----~~i~~~p~~~~las~s~---dg~v----------~iwd~~~ 222 (233)
.+.+.++..|-.+- ..+..+|||++|.++.. |+.+ .++|+..
T Consensus 368 g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 368 GEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp TCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred ccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 45566665554321 23456899999988763 5542 8888863
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.77 E-value=1.2e-05 Score=62.40 Aligned_cols=194 Identities=9% Similarity=-0.016 Sum_probs=115.3
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEE--Eec-CcCcEEEEEEcC-CCCCEEEEEeC----------
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIE--LRG-HADSVDQLCWDP-KHADLIATASG---------- 87 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~--~~~-h~~~v~~~~~~~-~~~~~l~sg~~---------- 87 (233)
....+++++++..|..+...+.|.+++.... ....+. ..+ .......+++.+ ++ .+.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGG---HATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCE---ECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCC---EEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccce
Confidence 5788999983334444444455777765421 111110 111 113467889998 65 56555322
Q ss_pred -------CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEE-cCCCcEEEEEcCCC---eeeeeeecCceeeEEE
Q 026765 88 -------DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDVRKF---KPIHRRKFGYEVNEIA 156 (233)
Q Consensus 88 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~ 156 (233)
++.|..+|..+++.......-.....++++|+++.+.++ ...+.|..+++... +......... ...++
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 367888888766543322222334568999999866554 56688999998642 1111111222 67789
Q ss_pred ECCCCCEEEEEeC----------CCeEEEEecCCceeeeEEeeec----CceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 157 WNMTGEMFFLTTG----------NGTVEVLTYPSLRPLDTVVAHT----AGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 157 ~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~----~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+.++|+++++... .+.+..++. .++.+..+.... ..+.++++ .+++++++...++.|.++++..
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 9999987776654 466777775 456655554332 34566666 4566667766788999999864
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.73 E-value=2.7e-06 Score=73.11 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=108.0
Q ss_pred EEEEcCCCCCEEEEEeCCCe-------------------EEEEECCCCeeeeeeeecC----------CeeEEEECCCCC
Q 026765 71 QLCWDPKHADLIATASGDKT-------------------VRLWDARSGKCSQQAELSG----------ENINITYKPDGT 121 (233)
Q Consensus 71 ~~~~~~~~~~~l~sg~~d~~-------------------i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 121 (233)
.++++|+. .+++.+..++. |..+|..+++..-.+.... .........+|+
T Consensus 239 ~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 46777764 56777777764 9999999998766554321 111112222554
Q ss_pred ---eEEEEcCCCcEEEEEcCCCeeeeeeecCc----------------------------------------eeeEEEEC
Q 026765 122 ---HIAVGNRDDELTILDVRKFKPIHRRKFGY----------------------------------------EVNEIAWN 158 (233)
Q Consensus 122 ---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------------------------------------~~~~~~~~ 158 (233)
.++.+..+|.+.++|.++++.+...+... ....++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 67888899999999998888764322110 11236777
Q ss_pred CCCCEEEEEeC---------------------------------------------CCeEEEEecCCceeeeEEeeecCc
Q 026765 159 MTGEMFFLTTG---------------------------------------------NGTVEVLTYPSLRPLDTVVAHTAG 193 (233)
Q Consensus 159 ~~~~~~~~~~~---------------------------------------------~~~v~~~~~~~~~~~~~~~~~~~~ 193 (233)
|+.+++++... +|.+..||..+++..-.+..+. +
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~ 476 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-I 476 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-S
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-C
Confidence 77777776522 3779999999998876665433 3
Q ss_pred eeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 194 CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 194 v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+..-.+...+..++.|+.||.++.||.++|+.+-+|.
T Consensus 477 ~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 477 FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccCccceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 3333555567889999999999999999999988875
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.68 E-value=3.8e-07 Score=72.29 Aligned_cols=87 Identities=9% Similarity=0.083 Sum_probs=67.5
Q ss_pred EEECCCCCeEEEEcC---------CCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEE-EEEe-CCCeEEEEecCCce
Q 026765 114 ITYKPDGTHIAVGNR---------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-FLTT-GNGTVEVLTYPSLR 182 (233)
Q Consensus 114 ~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~ 182 (233)
++++|+++++.++.. ++.+.++|+.+.+.+..+..+.....+.++++++.+ ++.. .++.+.++|..+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 679999998887543 235669999999888888777789999999999854 4555 58999999999999
Q ss_pred eeeEEeeecCceeEEEECC
Q 026765 183 PLDTVVAHTAGCYCIAIDP 201 (233)
Q Consensus 183 ~~~~~~~~~~~v~~i~~~p 201 (233)
.+.++.... ....+++.+
T Consensus 349 vv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 349 DQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp EEEECCCCS-CCCEEECCC
T ss_pred EEEEEECCC-CCCEEEeec
Confidence 988876443 335666544
No 246
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.64 E-value=3.5e-06 Score=72.38 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=119.2
Q ss_pred EEEECcCCCEEEEEeCCCC-------------------EEEEecccCCCCceeeEEEecCc-------CcEEEEEEcCCC
Q 026765 25 SVAWNCTGTKLASGSVDQT-------------------ARVWHIEPHGHGKVKDIELRGHA-------DSVDQLCWDPKH 78 (233)
Q Consensus 25 ~~~~~~~~~~l~s~~~D~~-------------------v~vW~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~ 78 (233)
.++++|++..++.+..++. |..||..+.. .....+...|. .+........++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~--~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE--YVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc--eeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 6788899999988887763 8888876532 22222222232 112212221122
Q ss_pred C--CEEEEEeCCCeEEEEECCCCeeeeeeeecC---------------------------------------C-eeEEEE
Q 026765 79 A--DLIATASGDKTVRLWDARSGKCSQQAELSG---------------------------------------E-NINITY 116 (233)
Q Consensus 79 ~--~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~---------------------------------------~-~~~~~~ 116 (233)
. ..++.++.+|.+.++|.++++......... . -..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 1 367889999999999999998753221110 0 012678
Q ss_pred CCCCCeEEEEcC---------------------------------------------CCcEEEEEcCCCeeeeeeecCce
Q 026765 117 KPDGTHIAVGNR---------------------------------------------DDELTILDVRKFKPIHRRKFGYE 151 (233)
Q Consensus 117 ~~~~~~l~~~~~---------------------------------------------d~~i~i~d~~~~~~~~~~~~~~~ 151 (233)
+|+...+++... ++.+..||+.+++.+...+.+.+
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~ 476 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI 476 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC
Confidence 888777766522 36799999999988877766554
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecC-ceeEEEECCCCC-EEEEee
Q 026765 152 VNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTA-GCYCIAIDPMGR-YFAVGS 210 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~v~~i~~~p~~~-~las~s 210 (233)
...-.+...+..++.++.||.++.||.++++.+-++..... ...-+.|..+|+ |+++.+
T Consensus 477 ~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 477 FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 44445556788899999999999999999999887764332 224467778886 455443
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=2.7e-05 Score=61.64 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=96.1
Q ss_pred EEEEEeCCCeEEEEECCCCeeeeeeeecCCee--------EEEECC--CCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc
Q 026765 81 LIATASGDKTVRLWDARSGKCSQQAELSGENI--------NITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRRKFGY 150 (233)
Q Consensus 81 ~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 150 (233)
.++.+..++.+..+|..+++............ .+...| .+..+.+++.++.+..+|.++.+.+.......
T Consensus 190 ~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~ 269 (376)
T 3q7m_A 190 AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS 269 (376)
T ss_dssp EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC
Confidence 56678889999999999887655444321100 000111 24577778889999999998887766554332
Q ss_pred eeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeee-cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAH-TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
...... ++..+++++.++.+..+|..+++..-..... ......... .+..|..++.+|.+..+|.++++.+..+
T Consensus 270 -~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 270 -VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp -EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred -CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 222222 4677888888999999999888766544311 111222222 2567888999999999999999887665
Q ss_pred e
Q 026765 230 T 230 (233)
Q Consensus 230 ~ 230 (233)
.
T Consensus 345 ~ 345 (376)
T 3q7m_A 345 K 345 (376)
T ss_dssp E
T ss_pred e
Confidence 4
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.59 E-value=2.4e-05 Score=61.87 Aligned_cols=190 Identities=8% Similarity=0.021 Sum_probs=111.7
Q ss_pred CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecC-------cCcE-EEEEEcCCCCCEEEEEeCCCeEEEEECCCCeee
Q 026765 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH-------ADSV-DQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (233)
Q Consensus 31 ~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h-------~~~v-~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~ 102 (233)
++..+..++.++.|..+|..+.. ......+... ...+ ..+.. .+ ..++.++.++.|..+|..+++..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGGVTV--SG-GHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccCceE--eC-CEEEEEcCCCEEEEEECCCCCEE
Confidence 36678888889999999876432 2222222111 1222 22232 22 35667889999999999999876
Q ss_pred eeeeecCCeeE-EEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceee------EEEECCCCCEEEEEeCCCeEEE
Q 026765 103 QQAELSGENIN-ITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVN------EIAWNMTGEMFFLTTGNGTVEV 175 (233)
Q Consensus 103 ~~~~~~~~~~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~ 175 (233)
........... ... .+..+++++.++.+..+|..+++.+.......+.. .... .+..++++..++.+..
T Consensus 127 W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 127 WQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEE
T ss_pred EEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEE
Confidence 55544433221 112 23477788889999999998887776555432221 1111 2456777888899999
Q ss_pred EecCCceeeeEEeeecCc-------eeEEEECC--CCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 176 LTYPSLRPLDTVVAHTAG-------CYCIAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~-------v~~i~~~p--~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
+|..+++..-........ +..+.-.| .+..+..++.++.+..+|.++++.+-++
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 998887765544321100 00000111 2356666677788888888777665443
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.52 E-value=0.00013 Score=58.22 Aligned_cols=204 Identities=9% Similarity=0.007 Sum_probs=121.4
Q ss_pred ccEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
.....++|++.+..|. +-...+.|..++++.. .... .+.........+++++.++.++++-...+.|.+.++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~-~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEE-VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEE-EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEE-EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 4467899997666554 4445677777776532 1111 122222344567888766667677777788999888654
Q ss_pred eeeeeeeec-CCeeEEEECCCCCeEEEEc-CC-CcEEEEEcCCCeeeeeeecC-ceeeEEEECCCCCEEEEE-eCCCeEE
Q 026765 100 KCSQQAELS-GENINITYKPDGTHIAVGN-RD-DELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLT-TGNGTVE 174 (233)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~v~ 174 (233)
......... ..+..++++|.+..|.... .. +.|..+++...........+ ...+.++++++++.+..+ ...+.|.
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 322222211 3456789998766655443 34 67888887643322222222 246789999776666555 5578898
Q ss_pred EEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.+++........+.........+++ ..+..+.+-...+.|..+|..++..++++
T Consensus 272 ~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 272 RANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 8887532222122222345677888 34556667667788999986666544443
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.51 E-value=0.0002 Score=56.34 Aligned_cols=203 Identities=8% Similarity=-0.013 Sum_probs=120.7
Q ss_pred cEEEEEECcCCCEEEEE-eCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 22 KVHSVAWNCTGTKLASG-SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~-~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
....++|++.+..|.-+ ...+.|..++++... ... .+.........+++++.++.++++-...+.|.+.++....
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~-~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEE-VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEE-EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCC---ceE-EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 46788999766655444 456777777765321 111 1222223456788887666777777777899999987543
Q ss_pred eeeeeeec-CCeeEEEECCCCCeEE-EEcCC-CcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE-eCCCeEEE
Q 026765 101 CSQQAELS-GENINITYKPDGTHIA-VGNRD-DELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTVEV 175 (233)
Q Consensus 101 ~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~d-~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 175 (233)
........ ..+..++++|.+..|. +-... +.|..+++........... ....+.++++++++.+..+ ...+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 22222111 3456789998665554 44444 7788888764322221111 1246789999876666555 55788999
Q ss_pred EecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
+++........+.........+++. .+..+.+-...+.|..+|..+++.++++
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 9875422211122223455778883 4556666667788888886666544443
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.50 E-value=0.00018 Score=55.38 Aligned_cols=194 Identities=14% Similarity=0.067 Sum_probs=117.0
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC-C-eEEEEECCC
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-K-TVRLWDARS 98 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-~-~i~iwd~~~ 98 (233)
.....++|+++++.+++-..++.|..|+.+. ..... + ........+++.+++. ++++.... + .|..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g---~~~~~--~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG---NQQIH--A-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC---CEEEE--E-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC---ceEEE--E-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCC
Confidence 4577899999999777777788888887642 11111 1 1234678899998864 55554332 2 466677777
Q ss_pred CeeeeeeeecC--CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCe-eeee--------eec-C-ceeeEEEECCCCCEEE
Q 026765 99 GKCSQQAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFK-PIHR--------RKF-G-YEVNEIAWNMTGEMFF 165 (233)
Q Consensus 99 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~--------~~~-~-~~~~~~~~~~~~~~~~ 165 (233)
++......... ....++..+++..+++...++.+..+|....+ .+.. ... . ...+.+ +++++.++
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 76543332221 12234445555445555567888888876432 1110 000 0 123445 67777665
Q ss_pred EE-eCCCeEEEEecCC-cee--eeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 166 LT-TGNGTVEVLTYPS-LRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 166 ~~-~~~~~v~~~~~~~-~~~--~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
++ ..++.|..++... ++. ...+. .......++++++|+++++....+.|.++|.. ++.
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 55 5678999999864 221 11111 12345678999999988887778899999976 544
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=0.0003 Score=56.37 Aligned_cols=209 Identities=10% Similarity=0.005 Sum_probs=125.5
Q ss_pred ccccEEEEEECcCCCEEEEE-eCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 19 HKKKVHSVAWNCTGTKLASG-SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~-~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
....+..++|++.+..|.-+ ...+.|+.++++...........+.........+++++.++++.++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34567899999876665444 45677877776531100011112222345677888887666677777778899999987
Q ss_pred CCeeeeeeee-cCCeeEEEECCCCCeEEEEc-C-CCcEEEEEcCCCeeeeeeecC-ceeeEEEECCCCCEEEEE-eCCCe
Q 026765 98 SGKCSQQAEL-SGENINITYKPDGTHIAVGN-R-DDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLT-TGNGT 172 (233)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 172 (233)
.......... -..+..++++|.+.+|.... . .+.|...++............ ...+.++++++++.+..+ ...+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 6543332221 23466789998766655443 2 367888887653332222222 356789999877776666 45788
Q ss_pred EEEEecCCceeeeEEee---ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 173 VEVLTYPSLRPLDTVVA---HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 173 v~~~~~~~~~~~~~~~~---~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
|..++++... ...+.. .......+++. .+..+.+-...+.|..+|..+++.+.++
T Consensus 270 I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 270 ISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEEEETTSCC-CEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEEEeCCCCc-cEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 9999875422 222221 12345677773 3455666677788999997777554443
No 253
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.44 E-value=0.00027 Score=54.71 Aligned_cols=208 Identities=11% Similarity=0.009 Sum_probs=123.5
Q ss_pred cccEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 20 KKKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
......++|++++..|. +-..++.|..++++...........+.........+++++.++++.++-..++.|.+.|+..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 34567999998766554 44456888888875311001111122222234567888776666666667788999999875
Q ss_pred Ceeeeeee-ecCCeeEEEECCCCCeEEEEcC-C-CcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEE-eCCCeE
Q 026765 99 GKCSQQAE-LSGENINITYKPDGTHIAVGNR-D-DELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLT-TGNGTV 173 (233)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~v 173 (233)
........ .-..+..++++|.+..|..... . +.|..+++.......... .-...+.++++++++.+..+ ...+.|
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 44322222 1234567899987666554443 3 678888875432211111 12346789999877766655 456799
Q ss_pred EEEecCCceeeeEEee---ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 174 EVLTYPSLRPLDTVVA---HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 174 ~~~~~~~~~~~~~~~~---~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
..++++. .....+.. .......+++. .+..+.+-...+.|..+|..+++.++++
T Consensus 189 ~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 189 SSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 9999863 22222222 12345677875 3566666677788999998777655444
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.44 E-value=6.7e-05 Score=57.90 Aligned_cols=183 Identities=12% Similarity=0.021 Sum_probs=111.3
Q ss_pred CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeecC-C
Q 026765 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG-E 110 (233)
Q Consensus 32 ~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~-~ 110 (233)
+..+..++.++.+..+|.. .. ...........+.++...+++ . +..|+.++.|..+|.. ++......... .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~----~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT----EKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC----EEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CC----EEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 5566677778888888764 21 122233333445555665543 3 4567788999999998 66554444332 2
Q ss_pred eeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEee
Q 026765 111 NINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA 189 (233)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 189 (233)
...+...+++..+ +++ +.+..+| .+.+....... ...+.++...+++. +.+++.++.+..++. +++.+..+..
T Consensus 179 ~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 179 TSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp CSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred eeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC
Confidence 3345666777644 444 7899999 55554444332 23466677777665 555666777888874 4555544444
Q ss_pred ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 190 HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 190 ~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
....+.++...+++ .|..++.+|.|..+|. +++.+..+.
T Consensus 253 ~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 253 GKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp SSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred CCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE
Confidence 33334455666555 5666788888999996 676665543
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.42 E-value=4.1e-05 Score=59.13 Aligned_cols=188 Identities=14% Similarity=0.010 Sum_probs=111.9
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
...+.++...+++. +..++.++.+..++.. .. .. ..+......+.++...+++ .++ .++ +.|..+| .++
T Consensus 136 ~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~--~~--~~~~~~~~~~~~~~~d~~g-~l~-v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 136 KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT--EK--WRFKTNDAITSAASIGKDG-TIY-FGS--DKVYAIN-PDG 204 (330)
T ss_dssp SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC--EE--EEEECSSCCCSCCEECTTC-CEE-EES--SSEEEEC-TTS
T ss_pred CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC--Ee--EEEecCCCceeeeEEcCCC-EEE-EEe--CEEEEEC-CCC
Confidence 34455556666666 4456677888888865 21 11 2233334456666665553 444 444 7899999 666
Q ss_pred eeeeeeeec-CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCc-eeeEEEECCCCCEEEEEeCCCeEEEEe
Q 026765 100 KCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY-EVNEIAWNMTGEMFFLTTGNGTVEVLT 177 (233)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~ 177 (233)
+........ ....++...+++. +.+++.++.+..+|. +.+......... ....+....++ .+.+++.+|.+..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp CEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred cEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 544433332 2344567777764 555667778888874 344443333222 22334444444 566777888899998
Q ss_pred cCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 178 YPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
. +++....+......+.++..+++++ |..|+.+|.+++.....-
T Consensus 282 ~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 282 P-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp T-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred C-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 5 5666555554455667788878776 455889999999877643
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.42 E-value=0.00031 Score=54.45 Aligned_cols=204 Identities=7% Similarity=-0.024 Sum_probs=122.6
Q ss_pred ccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
....+++|++.+..| .+-...+.|..++++..... . ..+.........+++.+.++.++++-...+.|.++++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~--~-~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--Q-NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC--C-EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce--E-EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 346688999865554 55456777888877542111 1 1122222345678888766667677677789999998754
Q ss_pred eeeeee-eecCCeeEEEECCCCCeEEEEc--CCCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE-eCCCeEE
Q 026765 100 KCSQQA-ELSGENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTVE 174 (233)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~v~ 174 (233)
...... ..-..+..++++|.+..|.... ..+.|..+++........... -...+.++++++++.+..+ ...+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 322222 1123456788888766655444 357788888764322211111 1246789999876666555 5678899
Q ss_pred EEecCCceeeeEE-eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 175 VLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 175 ~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.++++... ...+ .........+++.. +..+.+-...+.|..+|..+++.++++
T Consensus 192 ~~d~dG~~-~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 192 KSNLDGTN-RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEETTSCS-CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEcCCCCc-eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 99875322 2222 22334567788764 455666667788999998777654443
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.41 E-value=0.00012 Score=54.83 Aligned_cols=167 Identities=12% Similarity=0.200 Sum_probs=110.1
Q ss_pred EEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeec--CCeeEEEECCCCCeEEEEcCCCcEEEEEcC
Q 026765 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDGTHIAVGNRDDELTILDVR 138 (233)
Q Consensus 61 ~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (233)
.+++-...+..++|+|++..+++....++.|...|.. ++..+...+. .....+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999876677778888999999997 7766666554 345568888888776766667788888875
Q ss_pred CCee---eeeeec-------CceeeEEEECCCCCEEEEEeCCCeEEEEecC---CceeeeEEe-------eecCceeEEE
Q 026765 139 KFKP---IHRRKF-------GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP---SLRPLDTVV-------AHTAGCYCIA 198 (233)
Q Consensus 139 ~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~-------~~~~~v~~i~ 198 (233)
.... +..... +.....++|++.++.++++.+.....+|.++ ....+..+. .+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4332 122211 2235789999999888877776555666553 111111110 1223467899
Q ss_pred ECCCCCE-EEEeeCCCcEEEEecCCcEEEEee
Q 026765 199 IDPMGRY-FAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 199 ~~p~~~~-las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
++|.... ++.....+.+.++|.+ ++.+..+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~ 210 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEM 210 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEE
Confidence 9997654 5555567889999976 5454443
No 258
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.40 E-value=8e-05 Score=64.64 Aligned_cols=191 Identities=15% Similarity=0.121 Sum_probs=102.2
Q ss_pred cEEEEEEC-cCCCEEEEEe-CCC----CEEEEecccC-CCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC----Ce
Q 026765 22 KVHSVAWN-CTGTKLASGS-VDQ----TARVWHIEPH-GHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD----KT 90 (233)
Q Consensus 22 ~V~~~~~~-~~~~~l~s~~-~D~----~v~vW~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d----~~ 90 (233)
.+...+|| |||++||-+. .+| +|+++|+... .. +.. .+.. ....++|+|++..++++...+ ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-KVSG---TNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-CEEE---ECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-cccC---ceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 67889999 9999887443 233 4888888753 21 110 1111 134678999876666554322 35
Q ss_pred EEEEECCCCeee--eeeeec--CCeeEEEECCCCCeEEEEcC---CCcEEEEEcCCCe-ee--eeee--cCceeeEEEEC
Q 026765 91 VRLWDARSGKCS--QQAELS--GENINITYKPDGTHIAVGNR---DDELTILDVRKFK-PI--HRRK--FGYEVNEIAWN 158 (233)
Q Consensus 91 i~iwd~~~~~~~--~~~~~~--~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~--~~~~--~~~~~~~~~~~ 158 (233)
|.++++.++... ..+... .....+.|+|||++|+.... ...+.++|+.+.. .. .... .........|+
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence 777888766422 111111 23456789999999886553 3357788886541 11 1111 11223334444
Q ss_pred CCCCEE-EEEeCC--C--eEEEEecCCceeeeE-EeeecCc--eeEEEECCCCCEEEEeeCCCc--EEEEec
Q 026765 159 MTGEMF-FLTTGN--G--TVEVLTYPSLRPLDT-VVAHTAG--CYCIAIDPMGRYFAVGSADSL--VSLWDI 220 (233)
Q Consensus 159 ~~~~~~-~~~~~~--~--~v~~~~~~~~~~~~~-~~~~~~~--v~~i~~~p~~~~las~s~dg~--v~iwd~ 220 (233)
. ++.+ +....+ + .+..++..+...... +..+... +..+++. .+.++++...|+. |.++|+
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 3 5544 444433 3 555556543222223 3344443 3445554 2344566777776 455554
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.38 E-value=0.00037 Score=54.75 Aligned_cols=207 Identities=9% Similarity=-0.005 Sum_probs=119.8
Q ss_pred CCCccceeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeC
Q 026765 8 FKNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (233)
Q Consensus 8 ~~~~~~~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~ 87 (233)
|++....-|.-+....+|.+..++..++++- ...|+..++... .. ..... .......++|++.++.++.+-..
T Consensus 21 ~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~--~~~I~~i~~~g~---~~-~~~~~-~~~~~~~l~~d~~~~~ly~~D~~ 93 (349)
T 3v64_C 21 FQCWCEAGYELRPDRRSCKALGPEPVLLFAN--RIDIRQVLPHRS---EY-TLLLN-NLENAIALDFHHRRELVFWSDVT 93 (349)
T ss_dssp CCEECCTTEEECTTSSCEEESSSCCEEEEEC--BSCEEEECTTSC---CE-EEEEC-SCSCEEEEEEETTTTEEEEEETT
T ss_pred eEEECCCCccCCCCCCcccccccCceeEeec--ccceEEEeCCCC---ee-EEeec-CCCceEEEEEeccccEEEEEecc
Confidence 3333333343344556677766644344432 345666665421 11 11222 23457889999876666666667
Q ss_pred CCeEEEEECCCCeeeeeeeec-CCeeEEEECCCCCe-EEEEcCCCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEE
Q 026765 88 DKTVRLWDARSGKCSQQAELS-GENINITYKPDGTH-IAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMF 164 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 164 (233)
.+.|..+++..+......... ..+..+++.+.+.. .++-...+.|.+.++........... ......++++|.+..+
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 789999998765432222111 23456888875544 45556677899999865432222211 2346788999866655
Q ss_pred EEE-eCC-CeEEEEecCCceeeeEE-eeecCceeEEEECCCCCEE-EEeeCCCcEEEEecCC
Q 026765 165 FLT-TGN-GTVEVLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDISE 222 (233)
Q Consensus 165 ~~~-~~~-~~v~~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~~ 222 (233)
... ..+ +.|..++.+... ...+ ...-...+.++++|++..| ++-+..+.|..+|++-
T Consensus 174 y~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 554 444 778888765322 1222 1223456899999876655 4445567899999863
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=6.2e-05 Score=60.96 Aligned_cols=152 Identities=19% Similarity=0.246 Sum_probs=94.1
Q ss_pred EEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcC-CC----cEEEEEcCC-Ce
Q 026765 69 VDQLCWDP-KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNR-DD----ELTILDVRK-FK 141 (233)
Q Consensus 69 v~~~~~~~-~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~----~i~i~d~~~-~~ 141 (233)
...++++| +++.++ .+...+.|+.+|+..+..............+++++++++|+++.. ++ .+.+++... ..
T Consensus 139 P~~lavdp~~~g~Ly-v~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLY-LVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEE-EEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCEEEECCCCCCeEE-EEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 46788887 344444 444448899999987665444333345677999999996665554 22 233344321 11
Q ss_pred eeeeeecCceeeEEEECC-CCCEEEEEeCCCeEEEEecCCceeeeEEe-eecCceeEEEECCCCCE-EEEeeCCCcEEEE
Q 026765 142 PIHRRKFGYEVNEIAWNM-TGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRY-FAVGSADSLVSLW 218 (233)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~-las~s~dg~v~iw 218 (233)
.............++++| ++.++++-..++.|..++........... ........++++|++++ +++-...+.|..+
T Consensus 218 ~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 218 VITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp SEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 111111223456788999 66666666778999999987654322111 12234678999999995 4555567889998
Q ss_pred ecC
Q 026765 219 DIS 221 (233)
Q Consensus 219 d~~ 221 (233)
+.+
T Consensus 298 ~~d 300 (430)
T 3tc9_A 298 DYD 300 (430)
T ss_dssp EEE
T ss_pred eCC
Confidence 875
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.34 E-value=3e-05 Score=66.20 Aligned_cols=198 Identities=10% Similarity=0.090 Sum_probs=109.8
Q ss_pred EEEECc-CCCEEEEEeCCC-----------CEEEEecccCCCCceeeEEEe-cCcCcEEEEEEcCCCCCEEEEEeC-CCe
Q 026765 25 SVAWNC-TGTKLASGSVDQ-----------TARVWHIEPHGHGKVKDIELR-GHADSVDQLCWDPKHADLIATASG-DKT 90 (233)
Q Consensus 25 ~~~~~~-~~~~l~s~~~D~-----------~v~vW~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sg~~-d~~ 90 (233)
.+++.+ +++.++.|+.+. .+.+||+....-.... ... .+......+++.++ +++++.|+. +..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--~~~~~~~~~~~~~~~~~~-g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--VTVTKHDMFCPGISMDGN-GQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--EEECSCCCSSCEEEECTT-SCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--ccCCCCCCccccccCCCC-CCEEEeCCCCCCc
Confidence 445666 788888888653 4778887653322222 222 23333444566655 467778874 458
Q ss_pred EEEEECCCCeeeeeeeecCC--eeEEEECCCCCeEEEEc-CC-----CcEEEEEcCCCeeeeee-----ecCceeeEEEE
Q 026765 91 VRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGN-RD-----DELTILDVRKFKPIHRR-----KFGYEVNEIAW 157 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~-----~~~~~~~~~~~ 157 (233)
+.+||..+.+.......... ...++..++++.++.|+ .+ ..+.+||+.+.+..... ..........+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 99999988765443222221 12456677999988888 34 46899998775533210 11000001122
Q ss_pred CCCCCEEEEEeCCC---------eEEEEecCCceeeeEEeeecC---------ceeEEEEC-CCCCEEEEeeCCC-----
Q 026765 158 NMTGEMFFLTTGNG---------TVEVLTYPSLRPLDTVVAHTA---------GCYCIAID-PMGRYFAVGSADS----- 213 (233)
Q Consensus 158 ~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~~~---------~v~~i~~~-p~~~~las~s~dg----- 213 (233)
..+++.++.++.+| .+..||..+..-......+.. .-.++.+. .++++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 34556666665443 456777655432222111111 12344443 3678888888543
Q ss_pred ------cEEEEecCCcEE
Q 026765 214 ------LVSLWDISEMLC 225 (233)
Q Consensus 214 ------~v~iwd~~~~~~ 225 (233)
.|.+||..+..-
T Consensus 427 ~~~~~~~v~~yd~~~~~W 444 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPN 444 (656)
T ss_dssp CCCCEEEEECCSTTSCCE
T ss_pred cCCcceEEEcCCCCCCCe
Confidence 678888876543
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.31 E-value=0.00026 Score=54.77 Aligned_cols=159 Identities=11% Similarity=0.192 Sum_probs=106.1
Q ss_pred EecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeecC---------CeeEEEE---CCCCCeEEEEc--
Q 026765 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---------ENINITY---KPDGTHIAVGN-- 127 (233)
Q Consensus 62 ~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~l~~~~-- 127 (233)
++.....--++.|++..+.++++.-..++|..||...+..... ...+ ....+.+ .|+++.+++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 3333333446789887677777777899999999875543332 2222 1346889 68876666543
Q ss_pred -----------CCCcEEEEEcC---CCeeeeeeecC--------------ceeeEEEECCCCCEEEEEeCC-CeEEEEec
Q 026765 128 -----------RDDELTILDVR---KFKPIHRRKFG--------------YEVNEIAWNMTGEMFFLTTGN-GTVEVLTY 178 (233)
Q Consensus 128 -----------~d~~i~i~d~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~ 178 (233)
.+..+..||+. +.+.+...... ...+.++..++|+..++.+.. +.|..++.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 15678999998 66655433321 247889999999999988877 87777765
Q ss_pred CCceeeeEEe-e-----ecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 179 PSLRPLDTVV-A-----HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 179 ~~~~~~~~~~-~-----~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+. +....+. . ..-..+.|+++|+|+.|++...+|.+..+|+++
T Consensus 167 dG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 167 DG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp TS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 43 2222211 1 112356899999999888776699999999874
No 263
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0015 Score=56.84 Aligned_cols=209 Identities=11% Similarity=0.014 Sum_probs=122.3
Q ss_pred ccccEEEEEECcCCCEE-EEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECC
Q 026765 19 HKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l-~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~ 97 (233)
....+.+|+|++.+..| ++-...+.|+.++++...........+.........|++++.+++++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34557789998865555 45455677877777532110011122332334566788887776777777788899999997
Q ss_pred CCeeeeeeee-cCCeeEEEECCCCCeEEEEc-CC-CcEEEEEcCCCeeeeeeecC-ceeeEEEECCCCCEEEEE-eCCCe
Q 026765 98 SGKCSQQAEL-SGENINITYKPDGTHIAVGN-RD-DELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLT-TGNGT 172 (233)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 172 (233)
.......... -..+..++++|...+|.... .. +.|...++............ ...+.+++++..+.|+.+ ...+.
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 6543222221 13466799998765655443 23 67888888654433222222 357788998776666655 45678
Q ss_pred EEEEecCCceeeeEEe-e--ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 173 VEVLTYPSLRPLDTVV-A--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 173 v~~~~~~~~~~~~~~~-~--~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
|..+++.... ...+. . .-.....|++.. ++++++-...+.|...|..++..+.++
T Consensus 582 I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCS-CEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCc-eEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 8888875322 22222 1 122345677643 345555556788888887666544443
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.28 E-value=0.00021 Score=59.97 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=91.2
Q ss_pred eEEEEECCCCeeeeeeeecC----------CeeEEEECCCCC---eEEEEcCCCcEEEEEcCCCeeeeeeecCc------
Q 026765 90 TVRLWDARSGKCSQQAELSG----------ENINITYKPDGT---HIAVGNRDDELTILDVRKFKPIHRRKFGY------ 150 (233)
Q Consensus 90 ~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------ 150 (233)
.|..+|.++++..-...... ...-+...++|+ .++.+..++.+.++|..+++.+...+...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 58899999998765544321 111122224664 56678889999999998887765544321
Q ss_pred --------ee--------------------------eEEEECCCCCEEEEEe----------------------------
Q 026765 151 --------EV--------------------------NEIAWNMTGEMFFLTT---------------------------- 168 (233)
Q Consensus 151 --------~~--------------------------~~~~~~~~~~~~~~~~---------------------------- 168 (233)
++ ..++++|+...+++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 11 2356677766666553
Q ss_pred ---------CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 169 ---------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 169 ---------~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.+|.+..+|..+++..-++.. ...+....+...+..+..++.||.|+.||.++++.+-+|.
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 347888899888877655542 2223322223345677779999999999999999988775
No 265
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.00098 Score=52.04 Aligned_cols=193 Identities=13% Similarity=0.198 Sum_probs=118.6
Q ss_pred CCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcC----CCCC--EEEEEeC---CCeEEEEECC--CC
Q 026765 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP----KHAD--LIATASG---DKTVRLWDAR--SG 99 (233)
Q Consensus 31 ~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~--~l~sg~~---d~~i~iwd~~--~~ 99 (233)
...+++....++-+.|||+.. +... .+.. ..++.+..-| .+.. ++++... +.+|.+|++. ++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G----~~l~-~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDG----KMLH-SYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTS----CEEE-EECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred CccEEEEEcCCCCEEEEcCCC----cEEE-EccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 445666667778899999842 2111 2322 3344444433 1111 3333333 5789999773 33
Q ss_pred eeeeee----e--ec-CCeeEEEE--CCC-CC-eEEEEcCCCcEEEEEcC-------CCeeeeeeecCceeeEEEECCCC
Q 026765 100 KCSQQA----E--LS-GENINITY--KPD-GT-HIAVGNRDDELTILDVR-------KFKPIHRRKFGYEVNEIAWNMTG 161 (233)
Q Consensus 100 ~~~~~~----~--~~-~~~~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~~~~~ 161 (233)
...... . .. ..+..+++ +|. +. ++++...++.+..|++. +.+.+.....+.++..+...+..
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY 191 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC
Confidence 322110 1 11 33445666 774 43 67888889999999883 23455666667788899999888
Q ss_pred CEEEEEeCCCeEEEEecC-----CceeeeEEe-eec-CceeEEEE--CCCCC-EEEEee-CCCcEEEEecC-CcEEEEee
Q 026765 162 EMFFLTTGNGTVEVLTYP-----SLRPLDTVV-AHT-AGCYCIAI--DPMGR-YFAVGS-ADSLVSLWDIS-EMLCVRTF 229 (233)
Q Consensus 162 ~~~~~~~~~~~v~~~~~~-----~~~~~~~~~-~~~-~~v~~i~~--~p~~~-~las~s-~dg~v~iwd~~-~~~~i~~~ 229 (233)
..++++-++.-|..++.+ +.+.+..+. ++- ..+..+++ .++++ +|++.+ .+....|||.+ +.+.+.+|
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999999998777777754 233443321 121 35666776 56666 666666 56799999997 67778777
Q ss_pred e
Q 026765 230 T 230 (233)
Q Consensus 230 ~ 230 (233)
.
T Consensus 272 ~ 272 (355)
T 3amr_A 272 R 272 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.23 E-value=0.00032 Score=60.04 Aligned_cols=158 Identities=15% Similarity=0.200 Sum_probs=102.9
Q ss_pred EEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeeeeeeeec----------CCeeEEEECCCCC
Q 026765 71 QLCWDPKHADLIATASGDK-------------------TVRLWDARSGKCSQQAELS----------GENINITYKPDGT 121 (233)
Q Consensus 71 ~~~~~~~~~~~l~sg~~d~-------------------~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 121 (233)
.++++|.. .+++.+..++ .|..+|..+++..-..... .+.....+..+++
T Consensus 234 ~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 35677754 4666777665 3899999999876655432 1112222223554
Q ss_pred ---eEEEEcCCCcEEEEEcCCCeeeeeeecCc-------------e------------------------eeEEEECCCC
Q 026765 122 ---HIAVGNRDDELTILDVRKFKPIHRRKFGY-------------E------------------------VNEIAWNMTG 161 (233)
Q Consensus 122 ---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~------------------------~~~~~~~~~~ 161 (233)
.++.+..++.+.++|.++++.+...+... + ...++++|+.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 57888899999999998887763322111 0 1125566665
Q ss_pred CEEEEEe------------------------------------CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCE
Q 026765 162 EMFFLTT------------------------------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRY 205 (233)
Q Consensus 162 ~~~~~~~------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 205 (233)
..+.+.. .+|.+..||..+++..-+...+ .......+...+.+
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~ 471 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNL 471 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTE
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCE
Confidence 6555421 2378999999988876655432 23333334446778
Q ss_pred EEEeeCCCcEEEEecCCcEEEEeee
Q 026765 206 FAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 206 las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
++.|+.|+.++.||.++++.+.+|.
T Consensus 472 vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 472 VFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCcccchhhhhhcChhheEec
Confidence 8889999999999999999988774
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.20 E-value=0.0011 Score=52.74 Aligned_cols=193 Identities=9% Similarity=-0.001 Sum_probs=112.2
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCee
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~ 101 (233)
.-+|.+..++ .+|+-+ ....|+..++.... .. ... ........++|++.++.++++-...+.|..+++..+..
T Consensus 78 ~~~C~~~~~~-~~l~~~-~~~~I~~i~~~~~~---~~-~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFA-NRIDIRQVLPHRSE---YT-LLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 150 (386)
T ss_dssp SSCEEECSSC-CEEEEE-CBSCEEEECTTSCC---CE-EEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE
T ss_pred CCeECCcccc-ceeEee-cCccceeeccCCCc---EE-EEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc
Confidence 3345554443 333333 23567777664321 11 112 23345788999987666766766778999999876643
Q ss_pred eeeeeec-CCeeEEEECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeeecC-ceeeEEEECCCCCEEEEEe-CC-CeEEEE
Q 026765 102 SQQAELS-GENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLTT-GN-GTVEVL 176 (233)
Q Consensus 102 ~~~~~~~-~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~v~~~ 176 (233)
....... ..+..+++++.+..| ++-...+.|.+.++............ .....++++|.+..+.... .+ +.|..+
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 2222211 234567888755444 55556678888887643322222212 3467888998776665554 44 678887
Q ss_pred ecCCceeeeEEe-eecCceeEEEECCCCCEE-EEeeCCCcEEEEecCC
Q 026765 177 TYPSLRPLDTVV-AHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDISE 222 (233)
Q Consensus 177 ~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~~ 222 (233)
+.+... ...+. ..-...+.|+++|++..| ++-+..+.|..+|++.
T Consensus 231 ~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 231 SMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp ETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 765322 22222 223456899999866655 4445567899998863
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.17 E-value=8.2e-05 Score=64.57 Aligned_cols=154 Identities=11% Similarity=0.079 Sum_probs=88.8
Q ss_pred cEEEEEEc-CCCCCEEEEEeCCC----eEEEEECCCC-eeeeeeeecCCeeEEEECCCCCeEEEEcCC-----CcEEEEE
Q 026765 68 SVDQLCWD-PKHADLIATASGDK----TVRLWDARSG-KCSQQAELSGENINITYKPDGTHIAVGNRD-----DELTILD 136 (233)
Q Consensus 68 ~v~~~~~~-~~~~~~l~sg~~d~----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d 136 (233)
.+...+|+ |++..++++...+| +|.++|+.++ +.... ........+.|+||++.|+....+ ..|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57788999 98765555554433 5999999887 52211 111112357899999988876654 2477777
Q ss_pred cCCCee----eeeeecCceeeEEEECCCCCEEEEEeC---CCeEEEEecCCce-ee--eEEe-eecCceeEEEECCCCCE
Q 026765 137 VRKFKP----IHRRKFGYEVNEIAWNMTGEMFFLTTG---NGTVEVLTYPSLR-PL--DTVV-AHTAGCYCIAIDPMGRY 205 (233)
Q Consensus 137 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~-~~--~~~~-~~~~~v~~i~~~p~~~~ 205 (233)
+.+.+. +.......-...+.|+++|++++.... ...+.+++..+.. .. ..+. ......+++.|+..+.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 765431 111111122456789999999887653 4467777776541 12 2232 23344556665443334
Q ss_pred EEEeeCC--C--cEEEEecCC
Q 026765 206 FAVGSAD--S--LVSLWDISE 222 (233)
Q Consensus 206 las~s~d--g--~v~iwd~~~ 222 (233)
++....+ + .|..+|+..
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTS
T ss_pred EEEeCCCCCCCcEEEEEcCCC
Confidence 4444443 2 566666653
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.16 E-value=0.0018 Score=52.50 Aligned_cols=197 Identities=16% Similarity=0.198 Sum_probs=113.4
Q ss_pred ccccEEEEEECcCCCEEEEEeCC---CC-EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVD---QT-ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D---~~-v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.......++|+++|+++++.... .. +...+... ..... ..+. .-.....++++|.++.++++-..++.|..+
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~-~~~~~--~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS-GFTER--LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG-TTCCE--EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC-Ceecc--cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 34457899999999955554321 12 22222211 11110 1111 223345678888556776666677899999
Q ss_pred ECCCCeeee-eeeec--CCeeEEEECCCCCeEE-EEcCCCcEEEEEcCC--Cee-----eeee--ec-----------Cc
Q 026765 95 DARSGKCSQ-QAELS--GENINITYKPDGTHIA-VGNRDDELTILDVRK--FKP-----IHRR--KF-----------GY 150 (233)
Q Consensus 95 d~~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~--~~~-----~~~~--~~-----------~~ 150 (233)
|..++.... ..... .....++++|++++|. +-...+.|..++... ... +... .. -.
T Consensus 256 d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~ 335 (433)
T 4hw6_A 256 DPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW 335 (433)
T ss_dssp CTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS
T ss_pred ECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc
Confidence 988665422 22221 2234599999999555 445567888877542 111 0000 00 01
Q ss_pred eeeEEEE---------CCCCCEEEEEeCCCeEEEEecCCceeeeEEeeec------------------CceeEEEEC-CC
Q 026765 151 EVNEIAW---------NMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT------------------AGCYCIAID-PM 202 (233)
Q Consensus 151 ~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~v~~i~~~-p~ 202 (233)
....+++ ..+++++++-..++.|+.++. ++. +.++.+.. .....|+++ ++
T Consensus 336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred CCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 2456888 777877777778889998884 442 33333221 235689999 56
Q ss_pred CCEEEEeeCCCcEEEEecC
Q 026765 203 GRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 203 ~~~las~s~dg~v~iwd~~ 221 (233)
+.++++=..++.|+.++++
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 6666666667778887765
No 270
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.15 E-value=3.5e-05 Score=66.25 Aligned_cols=207 Identities=10% Similarity=-0.003 Sum_probs=118.3
Q ss_pred cEEEEEECcCCCEEEEEe-CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe
Q 026765 22 KVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~ 100 (233)
.+..++|++.+..|.-+. ..+.|+.+++............+.........+++.+.+++++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456788888776665554 5678888887531000000001111112344577776566666666667889999987654
Q ss_pred eeeeeee-cCCeeEEEECCCCCeEEEEcC-C-CcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE-eCCCeEEE
Q 026765 101 CSQQAEL-SGENINITYKPDGTHIAVGNR-D-DELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTVEV 175 (233)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 175 (233)
....... ...+..++++|.+.+|+.... . +.|..+++........... ....+.++++++++.++.+ ...+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 3322221 123456888886655554432 2 6777777653222111111 1246789999876655554 56788999
Q ss_pred EecCCceeeeEEee---ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 176 LTYPSLRPLDTVVA---HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 176 ~~~~~~~~~~~~~~---~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+++.... ...+.. .......|++..+ .++++....+.|..+|..+++.++++.
T Consensus 567 ~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 567 IDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp ECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 9875322 122221 1123445666554 556666777899999998888777663
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.14 E-value=0.00019 Score=61.43 Aligned_cols=185 Identities=13% Similarity=0.119 Sum_probs=112.4
Q ss_pred EEEEECcCCCEEEEEeCCCC-------------------EEEEecccCCCCceeeEEEecCc-------CcEEEEEEcCC
Q 026765 24 HSVAWNCTGTKLASGSVDQT-------------------ARVWHIEPHGHGKVKDIELRGHA-------DSVDQLCWDPK 77 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~~D~~-------------------v~vW~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~ 77 (233)
..++++|+...++.+..++. |..+|+.+.. .....+...|. .+.....+..+
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~--~~W~~~~~~~~~wd~~~~~~~~~~d~~~~ 310 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK--LAWHYQVTPGDSWDFTATQQITLAELNID 310 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc--eeeEeecCCCccccccCCCCcEEEEeccC
Confidence 35688888888888876653 7777765432 22222222232 22222222223
Q ss_pred CC--CEEEEEeCCCeEEEEECCCCeeeeeeeecC------------C-------------------------eeEEEECC
Q 026765 78 HA--DLIATASGDKTVRLWDARSGKCSQQAELSG------------E-------------------------NINITYKP 118 (233)
Q Consensus 78 ~~--~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~------------~-------------------------~~~~~~~~ 118 (233)
+. ..++.++.+|.+.++|..+++......... . -..++++|
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp 390 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP 390 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC
Confidence 32 257889999999999999998653222111 0 00156677
Q ss_pred CCCeEEEE------------------------------------cCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCC
Q 026765 119 DGTHIAVG------------------------------------NRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 119 ~~~~l~~~------------------------------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (233)
+...+.+. ..++.+..||+.+.+.+...+...+.....+...+.
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg 470 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGN 470 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCC
Confidence 65555431 123779999999998877766554444434445678
Q ss_pred EEEEEeCCCeEEEEecCCceeeeEEeeecCce-eEEEECCCCC-EEEEee
Q 026765 163 MFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGC-YCIAIDPMGR-YFAVGS 210 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v-~~i~~~p~~~-~las~s 210 (233)
.++.++.++.++.+|.++++.+..+....... .-+.+..+|+ +++.++
T Consensus 471 ~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 471 LVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 88899999999999999999887776432211 2234445665 455444
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.11 E-value=0.0033 Score=53.42 Aligned_cols=201 Identities=6% Similarity=0.001 Sum_probs=123.8
Q ss_pred ccEEEEEECcCCCEEE-EEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~-s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
.....|+|++.+..|. +-..++.|..++++... ... .+..-......+++++.++++.++-...+.|.+.++...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~---~~~-v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSA---LEH-VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEE-EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCC---cEE-EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 4577999998766665 44457888777765321 111 122222345678887766677777677789999998654
Q ss_pred eeeeee-eecCCeeEEEECCCCCeEEEEc--CCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE-eCCCeEEE
Q 026765 100 KCSQQA-ELSGENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGTVEV 175 (233)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 175 (233)
...... ..-..+..++++|....|.... ..+.|...++...............+.++++++++.+..+ ...+.|..
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 322211 1123457799998655555443 2467777777654332222223457789999876666655 55788999
Q ss_pred EecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEE
Q 026765 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR 227 (233)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~ 227 (233)
+++..... ..+.........+++.. +..+.+-...+.|...|..++....
T Consensus 193 ~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 193 SNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp EETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceE
Confidence 98764322 23333444567888865 4555666667889999977665433
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.0024 Score=51.69 Aligned_cols=198 Identities=13% Similarity=0.130 Sum_probs=112.5
Q ss_pred ccccEEEEEECcCCCEEEEEeC-CCC---EEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 19 HKKKVHSVAWNCTGTKLASGSV-DQT---ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~-D~~---v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
.......++|+++++.|..+.. ++. ..+|-.......... .+. .......++++|+++.++++-..++.|..+
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~--~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~ 253 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT--ELT-KGQNCNGAETHPINGELYFNSWNAGQVFRY 253 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE--EEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee--eec-cCCCceEEEEeCCCCEEEEEECCCCEEEEE
Confidence 3455778999999996655544 222 222222211111111 121 123456678899656777776678899999
Q ss_pred ECCCCeeeeeeeec--CCeeEEEECCCCCeEE-EEcCCCcEEEEEcCCC--ee-----eeee--------------ecCc
Q 026765 95 DARSGKCSQQAELS--GENINITYKPDGTHIA-VGNRDDELTILDVRKF--KP-----IHRR--------------KFGY 150 (233)
Q Consensus 95 d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~--~~-----~~~~--------------~~~~ 150 (233)
|...+......... .....++++|++++|. +-...+.|..++.... .. +... .+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 333 (430)
T 3tc9_A 254 DFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHA 333 (430)
T ss_dssp ETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSS
T ss_pred ECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCC
Confidence 99876543322222 2356799999999554 4456678888775431 11 1000 0111
Q ss_pred eeeEEEEC--------CCCCEEEEEeCCCeEEEEecCCceeeeEEeee------------------cCceeEEEECCC-C
Q 026765 151 EVNEIAWN--------MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAH------------------TAGCYCIAIDPM-G 203 (233)
Q Consensus 151 ~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~~v~~i~~~p~-~ 203 (233)
+...+... .+++++++-..++.|+.++. +++ +..+.+. -.....|+++|+ +
T Consensus 334 P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g 411 (430)
T 3tc9_A 334 PRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERE 411 (430)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTT
T ss_pred CcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCC
Confidence 11134442 34666666667788888873 443 2333322 114678999995 5
Q ss_pred CEEEEeeCCCcEEEEecC
Q 026765 204 RYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 204 ~~las~s~dg~v~iwd~~ 221 (233)
.++++-..+..|+.++++
T Consensus 412 ~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 412 CFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEEGGGTEEEEEEEC
T ss_pred EEEEEECCCCeEEEEccC
Confidence 555665566778887765
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0027 Score=52.08 Aligned_cols=206 Identities=11% Similarity=0.052 Sum_probs=119.2
Q ss_pred ccEEEEEE-------CcCCCEEEEEeCCC-C------EEEEecccCCCCc--eeeEEEecCcCcEEEEEEcCCCCCEEEE
Q 026765 21 KKVHSVAW-------NCTGTKLASGSVDQ-T------ARVWHIEPHGHGK--VKDIELRGHADSVDQLCWDPKHADLIAT 84 (233)
Q Consensus 21 ~~V~~~~~-------~~~~~~l~s~~~D~-~------v~vW~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s 84 (233)
.....++| +++++.|+.+...+ . |.+.+......-. .....+... .....++.+|+++.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 35889999 99999666665543 2 4444322201110 000111111 233467889977788888
Q ss_pred EeCCCeEEEEECC-------CCee-----------e-eeeeec--CCeeEEEECCCCCeEE-EEcCCCcEEEEEcC--CC
Q 026765 85 ASGDKTVRLWDAR-------SGKC-----------S-QQAELS--GENINITYKPDGTHIA-VGNRDDELTILDVR--KF 140 (233)
Q Consensus 85 g~~d~~i~iwd~~-------~~~~-----------~-~~~~~~--~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~--~~ 140 (233)
-..++.|..+|+. ++.. . ...... .....++++|++++|. +-.....|+.++.. ..
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 8888899999987 4443 0 112222 3356799999999644 44566788886543 22
Q ss_pred ee-----eeee--------------ecCceeeEEEEC-------CCCCEEEEEeCCCeEEEEecCCceeeeEEeeec---
Q 026765 141 KP-----IHRR--------------KFGYEVNEIAWN-------MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT--- 191 (233)
Q Consensus 141 ~~-----~~~~--------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--- 191 (233)
.. +... ++..+...+... .+++++++-..+..|+.++ .++ .+.++.+..
T Consensus 345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~ 422 (496)
T 3kya_A 345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGAST 422 (496)
T ss_dssp EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTH
T ss_pred eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccc
Confidence 11 1000 111122244444 5667777777888999988 344 344554421
Q ss_pred ---------------------CceeEEEECCC-CCEEEEeeCCCcEEEEecCCcEEEEee
Q 026765 192 ---------------------AGCYCIAIDPM-GRYFAVGSADSLVSLWDISEMLCVRTF 229 (233)
Q Consensus 192 ---------------------~~v~~i~~~p~-~~~las~s~dg~v~iwd~~~~~~i~~~ 229 (233)
.....|+++++ +.++++=+.+..|+.++++...++...
T Consensus 423 ~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 423 SLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp HHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-----
T ss_pred cccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccC
Confidence 23568999997 666666667789999999877666543
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.07 E-value=0.0028 Score=51.35 Aligned_cols=200 Identities=11% Similarity=0.067 Sum_probs=114.1
Q ss_pred cEEEEEECcC--CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC---Ce-EEEEE
Q 026765 22 KVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD---KT-VRLWD 95 (233)
Q Consensus 22 ~V~~~~~~~~--~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d---~~-i~iwd 95 (233)
.-..|+|+|+ +..|..+...+.|+.+++.. ..+. .+.........+++++++. ++++-... .. +...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~---g~v~--~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN---QYVD--IKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT---TEEE--EECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC---CEEE--EeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 3568899985 44455554448888888643 1221 2333445688999999875 65554321 12 22233
Q ss_pred CCCCee-eeeeeecCCeeEEEECC-CCCeEEEEcCCCcEEEEEcCCCeeeee-eecC--ceeeEEEECCCCCEEE-EEeC
Q 026765 96 ARSGKC-SQQAELSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHR-RKFG--YEVNEIAWNMTGEMFF-LTTG 169 (233)
Q Consensus 96 ~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~~ 169 (233)
...+.. ......-.....++++| ++...++-..++.|..+|..+...... .... .....++++++++.+. +-..
T Consensus 214 ~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 214 RASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 221111 01111123345588899 666665666678899999875443111 1111 1123699999999554 4456
Q ss_pred CCeEEEEecCC--cee--eeEEeee---------------cCceeEEEE---------CCCCCEEEEeeCCCcEEEEecC
Q 026765 170 NGTVEVLTYPS--LRP--LDTVVAH---------------TAGCYCIAI---------DPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 170 ~~~v~~~~~~~--~~~--~~~~~~~---------------~~~v~~i~~---------~p~~~~las~s~dg~v~iwd~~ 221 (233)
++.|..+++.. .+. ...+.+. -.....+++ .+++.++++-...+.|+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence 78899987642 211 1122221 123567898 777877777777888999985
Q ss_pred CcEEEEee
Q 026765 222 EMLCVRTF 229 (233)
Q Consensus 222 ~~~~i~~~ 229 (233)
++ .+.++
T Consensus 373 ~G-~v~t~ 379 (433)
T 4hw6_A 373 EG-RVTTY 379 (433)
T ss_dssp TS-EEEEE
T ss_pred CC-CEEEE
Confidence 45 34443
No 276
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.06 E-value=0.00093 Score=56.12 Aligned_cols=151 Identities=9% Similarity=0.030 Sum_probs=87.2
Q ss_pred CCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcC--cEE-EEEEcCCCCCEEEEEeC------CCeEEEEECCCCeee
Q 026765 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD--SVD-QLCWDPKHADLIATASG------DKTVRLWDARSGKCS 102 (233)
Q Consensus 32 ~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~--~v~-~~~~~~~~~~~l~sg~~------d~~i~iwd~~~~~~~ 102 (233)
+..++.++.|+.+..+|..+.. ......+..+.. .+. .... .+. .++.++. ++.|..+|..+++..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~P~v--~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGK--INWEVEVCDPKVGSTLTQAPFV--AKD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCCGGGTCBCCSCCEE--ETT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCEEEEEECCCCC--EEEEecCCCCCccceeccCCEE--ECC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 5567777788888888875432 222222222110 111 0011 123 3444544 789999999999876
Q ss_pred eeeeecCCe---------------------------------------eEEEECCCCCeEEEEcCC--------------
Q 026765 103 QQAELSGEN---------------------------------------INITYKPDGTHIAVGNRD-------------- 129 (233)
Q Consensus 103 ~~~~~~~~~---------------------------------------~~~~~~~~~~~l~~~~~d-------------- 129 (233)
-........ ..+++.++...+..+..+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 544432111 124566666666666532
Q ss_pred --CcEEEEEcCCCeeeeeeecCc----------eeeEEEECCCCC---EEEEEeCCCeEEEEecCCceeeeEE
Q 026765 130 --DELTILDVRKFKPIHRRKFGY----------EVNEIAWNMTGE---MFFLTTGNGTVEVLTYPSLRPLDTV 187 (233)
Q Consensus 130 --~~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~ 187 (233)
+.+..+|.++++.+...+... ...-+....+|+ .++.++.+|.+.++|..+++.+-.+
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 258899998888776654321 111112224664 5677888999999999888776554
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.05 E-value=0.0017 Score=54.71 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=89.2
Q ss_pred CeEEEEECCCCeeeeeeeecCC----------eeEEEEC-CCCC---eEEEEcCCCcEEEEEcCCCeeeeeeecCce---
Q 026765 89 KTVRLWDARSGKCSQQAELSGE----------NINITYK-PDGT---HIAVGNRDDELTILDVRKFKPIHRRKFGYE--- 151 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~~----------~~~~~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--- 151 (233)
+.|..+|..+++..-....... ..-+... .+|+ .++.++.++.+.++|.++++.+........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 5899999999987665543211 1112221 4664 677889999999999988777654433210
Q ss_pred -------------------------------------------eeEEEECCCCCEEEEEe--------------------
Q 026765 152 -------------------------------------------VNEIAWNMTGEMFFLTT-------------------- 168 (233)
Q Consensus 152 -------------------------------------------~~~~~~~~~~~~~~~~~-------------------- 168 (233)
...++++|+...+++..
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 01234555555544432
Q ss_pred -------------CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 169 -------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 169 -------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..|.+..||..+++..-+.... .++..-.....+..+..|+.||.++.||.++++.+-+|+
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 2578888998888776554422 222211111235677789999999999999999988775
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.05 E-value=0.0023 Score=49.50 Aligned_cols=192 Identities=9% Similarity=0.071 Sum_probs=115.3
Q ss_pred EEEEECcCCCEEEEEe-CCCCEEEEecccCCCCceeeEEEecC------cCcEEEEEE---cCCCCCEEEEEe-------
Q 026765 24 HSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGH------ADSVDQLCW---DPKHADLIATAS------- 86 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~~~~~h------~~~v~~~~~---~~~~~~~l~sg~------- 86 (233)
-+++|++....|..++ ..++|..|+.... ......+++- ...+..+.| .|. +.++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccc
Confidence 3678887665555555 7999999987532 2222223321 114578999 676 45665433
Q ss_pred ------CCCeEEEEECC---CCeeeeeeeec----C----------CeeEEEECCCCCeEEEEcCC-CcEEEEEcCCCee
Q 026765 87 ------GDKTVRLWDAR---SGKCSQQAELS----G----------ENINITYKPDGTHIAVGNRD-DELTILDVRKFKP 142 (233)
Q Consensus 87 ------~d~~i~iwd~~---~~~~~~~~~~~----~----------~~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~ 142 (233)
.+..|..||+. +++......+. + ....++..++|+..++++.. +.|..++......
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 26789999998 67655444432 1 24568999999988888877 7776666543221
Q ss_pred eee-eec-----CceeeEEEECCCCCEEEEEeCCCeEEEEecCCcee--eeEEe--ee---cCceeE-EEECCCCCE-EE
Q 026765 143 IHR-RKF-----GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP--LDTVV--AH---TAGCYC-IAIDPMGRY-FA 207 (233)
Q Consensus 143 ~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~--~~---~~~v~~-i~~~p~~~~-la 207 (233)
..- ... ....+.++++|+++.+++....+.+..+|...... +. .. +. ...... +..-.+|+. |+
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEE
Confidence 111 111 12367899999999999997799999999764322 11 11 11 112223 233346666 45
Q ss_pred EeeCCCcEEEEec
Q 026765 208 VGSADSLVSLWDI 220 (233)
Q Consensus 208 s~s~dg~v~iwd~ 220 (233)
+.+..+.+.+.+.
T Consensus 251 ~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 251 GARAPYAISFRSW 263 (334)
T ss_dssp EEETTEEEEEECS
T ss_pred EcCCCCEEEEECC
Confidence 5555555555543
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.03 E-value=0.0024 Score=48.97 Aligned_cols=186 Identities=16% Similarity=0.102 Sum_probs=102.9
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeE-EEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
+....++++++|+++++......++|+.+.... +.+..+ .+ ........++..+ +..++++-..++.|.++|...+
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~-g~~~~~~~~-~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD-GTVETLLTL-PDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-SCEEEEEEC-TTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCC-CeEEEEEeC-CCccccCcccccC-CCcEEEEECCCCeEEEEeCCCC
Confidence 457889999999976665443343444332211 222211 11 1122234444443 3344555556888888897654
Q ss_pred eeeee-e-------ee-cC--CeeEEEECCCCCeEEE-EcCCCcEEEEEcCC-Cee--eeeeecCceeeEEEECCCCCEE
Q 026765 100 KCSQQ-A-------EL-SG--ENINITYKPDGTHIAV-GNRDDELTILDVRK-FKP--IHRRKFGYEVNEIAWNMTGEMF 164 (233)
Q Consensus 100 ~~~~~-~-------~~-~~--~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 164 (233)
+.... . .. .. ....+ +|++.++.+ -...+.|..+++.. .+. ............++++++|+++
T Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~ 226 (306)
T 2p4o_A 149 SGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY 226 (306)
T ss_dssp EEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE
T ss_pred cEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEE
Confidence 21110 0 00 11 12234 778876654 45567899999864 221 1111111245678899999887
Q ss_pred EEEeCCCeEEEEecCCceeee--EEeeecCceeEEEEC---CCCCEEEEeeCC
Q 026765 165 FLTTGNGTVEVLTYPSLRPLD--TVVAHTAGCYCIAID---PMGRYFAVGSAD 212 (233)
Q Consensus 165 ~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~v~~i~~~---p~~~~las~s~d 212 (233)
++...++.|.+++.. ++... .+......+.+++|. |+++.|..++..
T Consensus 227 va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 227 GATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 777778899999864 44321 222223567899998 887766655543
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.03 E-value=0.00019 Score=61.23 Aligned_cols=199 Identities=8% Similarity=0.053 Sum_probs=105.5
Q ss_pred cEEEEEECcCCCEEEEEeC-CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEe-CC-----CeEEEE
Q 026765 22 KVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS-GD-----KTVRLW 94 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~-D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~-~d-----~~i~iw 94 (233)
...++++.+++++++.|+. +..+.+||..... ......++. ...-..++..++ +++++.|+ .+ ..+.+|
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~--W~~~~~~~~-~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~y 319 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS--WIPGPDMQV-ARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVY 319 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE--EEECCCCSS-CCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEE
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCc--eeECCCCCc-cccccceEEecC-CeEEEEeCcccCCcccccceEe
Confidence 3445677789999999984 5689999986421 111111111 111223444444 46777887 44 568999
Q ss_pred ECCCCeeeeee-----eecCCeeEEEECCCCCeEEEEcCCC---------cEEEEEcCCCeeeeeeecCc----------
Q 026765 95 DARSGKCSQQA-----ELSGENINITYKPDGTHIAVGNRDD---------ELTILDVRKFKPIHRRKFGY---------- 150 (233)
Q Consensus 95 d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~---------- 150 (233)
|..+.+....- ..........+..+++.++.|+.++ .+..||..+...........
T Consensus 320 d~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~ 399 (656)
T 1k3i_A 320 SPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 399 (656)
T ss_dssp ETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB
T ss_pred CCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCC
Confidence 99887654320 0000000011224455555555443 46778876654332111110
Q ss_pred eeeEEEEC-CCCCEEEEEeCCC-----------eEEEEecCCceeeeEE--eeecCce-eEEEECCCCCEEEEeeCC---
Q 026765 151 EVNEIAWN-MTGEMFFLTTGNG-----------TVEVLTYPSLRPLDTV--VAHTAGC-YCIAIDPMGRYFAVGSAD--- 212 (233)
Q Consensus 151 ~~~~~~~~-~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~--~~~~~~v-~~i~~~p~~~~las~s~d--- 212 (233)
.-..+.+. .+++.++.|+.++ .+.+||..+.+-.... .-..... .+....|++++++.|+.+
T Consensus 400 ~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 400 CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 11223332 4677777776432 5666665543221111 1112222 244567899999999865
Q ss_pred --------CcEEEEecCCcE
Q 026765 213 --------SLVSLWDISEML 224 (233)
Q Consensus 213 --------g~v~iwd~~~~~ 224 (233)
..+.+||..+.+
T Consensus 480 ~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGTE
T ss_pred CcCCCCcccceEEEcCCCCc
Confidence 468999987764
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.01 E-value=0.00063 Score=57.28 Aligned_cols=82 Identities=18% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCce-eEEEECCCCC-EE
Q 026765 129 DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGC-YCIAIDPMGR-YF 206 (233)
Q Consensus 129 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v-~~i~~~p~~~-~l 206 (233)
++.+..||+.+.+.+.+.....+...-.....+..++.++.|+.++.+|.++++.+-++....... .-+.+..+|+ |+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 467888999888877666544333221122246778889999999999999999887776433211 2266667776 45
Q ss_pred EEee
Q 026765 207 AVGS 210 (233)
Q Consensus 207 as~s 210 (233)
++.+
T Consensus 545 ~~~~ 548 (582)
T 1flg_A 545 GVTV 548 (582)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5443
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.97 E-value=0.0028 Score=53.54 Aligned_cols=141 Identities=15% Similarity=0.126 Sum_probs=87.0
Q ss_pred CeEEEEECCCCeeeeeeeecCC----------eeEEEEC-CCC---CeEEEEcCCCcEEEEEcCCCeeeeeeecCc----
Q 026765 89 KTVRLWDARSGKCSQQAELSGE----------NINITYK-PDG---THIAVGNRDDELTILDVRKFKPIHRRKFGY---- 150 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~~----------~~~~~~~-~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---- 150 (233)
..|..+|..+++..-....... ..-+... .+| ..++.++.++.+.++|.++++.+.......
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 357 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNV 357 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccc
Confidence 3788999999987655543321 1112222 567 456778899999999998887765443211
Q ss_pred ----------e--------------------------eeEEEECCCCCEEEEEe--------------------------
Q 026765 151 ----------E--------------------------VNEIAWNMTGEMFFLTT-------------------------- 168 (233)
Q Consensus 151 ----------~--------------------------~~~~~~~~~~~~~~~~~-------------------------- 168 (233)
+ ...++++|+.+++++..
T Consensus 358 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 437 (599)
T 1w6s_A 358 FKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLN 437 (599)
T ss_dssp EEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccce
Confidence 0 12345555555544321
Q ss_pred -------------CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 169 -------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 169 -------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..|.+..||..+++..-+.. +..+...-.+.-.+..+..++.|+.++.||.++++.+-+|+
T Consensus 438 ~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 438 MYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 34677888887776654432 12122211122245677779999999999999999988774
No 283
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.0065 Score=51.51 Aligned_cols=205 Identities=7% Similarity=-0.044 Sum_probs=119.4
Q ss_pred cccEEEEEECcCCCEEEEEe-CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q 026765 20 KKKVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~ 98 (233)
.+...+++|++.+..|.-+. ..+.|..++++... . ....+..-......+++++.+++++++-...+.|.+.++..
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~-~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--S-VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--c-eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 34567899998777665554 46777777765321 1 11122222356788999887667777777788999999876
Q ss_pred Ceeeeee-eecCCeeEEEECCCCCeEEEEcC--CCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEE-eCCCeE
Q 026765 99 GKCSQQA-ELSGENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLT-TGNGTV 173 (233)
Q Consensus 99 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~v 173 (233)
....... ..-..+..++++|.+.+|..... .+.|...++.......... .....+.++++++++.+..+ ...+.|
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 5332222 11234567899887555554442 3567666765432222111 12346788999876665555 557788
Q ss_pred EEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 174 EVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
..+++..........+.......+++..+ ..+.+-...+.|...|..+++.++.
T Consensus 196 ~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp EEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred EEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEE
Confidence 88887643322222212233457778765 5556666778899999877754443
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.95 E-value=0.0031 Score=53.26 Aligned_cols=195 Identities=14% Similarity=0.056 Sum_probs=115.4
Q ss_pred CCEEEEEeC-CCCEEEEec-ccCCCCceeeEEEecCc---------CcEEEEEEcCCCCC---EEEEEeCCCeEEEEECC
Q 026765 32 GTKLASGSV-DQTARVWHI-EPHGHGKVKDIELRGHA---------DSVDQLCWDPKHAD---LIATASGDKTVRLWDAR 97 (233)
Q Consensus 32 ~~~l~s~~~-D~~v~vW~~-~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~---~l~sg~~d~~i~iwd~~ 97 (233)
+..+..++. ++.|.-+|. .+.. .+......... .....+++.|.+.. .++.++.|+.+.-+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGT--ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCc--EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 456666676 788888877 4422 12222111110 00122344332222 26678889999999999
Q ss_pred CCeeeeeeeecC-----CeeE-EEECCCCCeEEEEc------CCCcEEEEEcCCCeeeeeeecCcee-------------
Q 026765 98 SGKCSQQAELSG-----ENIN-ITYKPDGTHIAVGN------RDDELTILDVRKFKPIHRRKFGYEV------------- 152 (233)
Q Consensus 98 ~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~------------- 152 (233)
+++..-...... .... ..+. ++ .+++++ .++.|..+|.++++.+.......+.
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 998765544322 1111 1111 33 455554 3789999999988877655432211
Q ss_pred --------------------------eEEEECCCCCEEEEEeCCC----------------eEEEEecCCceeeeEEeee
Q 026765 153 --------------------------NEIAWNMTGEMFFLTTGNG----------------TVEVLTYPSLRPLDTVVAH 190 (233)
Q Consensus 153 --------------------------~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~~~~~~ 190 (233)
...+..+....++.+..++ .+..+|.++++..-.+...
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 1234456677788877663 7888899888876555432
Q ss_pred cC---------ceeEEEEC-CCC---CEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 191 TA---------GCYCIAID-PMG---RYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 191 ~~---------~v~~i~~~-p~~---~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.. ...-+... .+| +.++.++.+|.+.++|.++++.+-.+.
T Consensus 298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 11 11112232 567 467889999999999999999887654
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.95 E-value=0.0028 Score=49.47 Aligned_cols=147 Identities=9% Similarity=0.187 Sum_probs=96.1
Q ss_pred CCCEEEEecccCCCCceeeEE-----EecCcCcEEEEEE--cCCCCC-EEEEEeCCCeEEEEECC-------CCeeeeee
Q 026765 41 DQTARVWHIEPHGHGKVKDIE-----LRGHADSVDQLCW--DPKHAD-LIATASGDKTVRLWDAR-------SGKCSQQA 105 (233)
Q Consensus 41 D~~v~vW~~~~~~~~~~~~~~-----~~~h~~~v~~~~~--~~~~~~-~l~sg~~d~~i~iwd~~-------~~~~~~~~ 105 (233)
+++|++|++++... .+..+. +..-...++.+++ +|..+. +++....++.+..|++. +.+.++.+
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 68899998864322 121110 0011145666777 665443 56677888999999882 23456777
Q ss_pred eecCCeeEEEECCCCCeEEEEcCCCcEEEEEcC-----CCeeeeeeecC---ceeeEEEE--CCCCC-EEEEEe-CCCeE
Q 026765 106 ELSGENINITYKPDGTHIAVGNRDDELTILDVR-----KFKPIHRRKFG---YEVNEIAW--NMTGE-MFFLTT-GNGTV 173 (233)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~---~~~~~~~~--~~~~~-~~~~~~-~~~~v 173 (233)
...+....+...+....|.++-++..|..++.+ +.+.+.....+ ..+..++. .++++ ++++++ +++..
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 777888889999988899999999777777754 23333332222 35677766 55666 666666 67899
Q ss_pred EEEecC-CceeeeEEe
Q 026765 174 EVLTYP-SLRPLDTVV 188 (233)
Q Consensus 174 ~~~~~~-~~~~~~~~~ 188 (233)
.+|+.. +.+.+..|.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999986 666776664
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.93 E-value=0.0048 Score=49.36 Aligned_cols=177 Identities=9% Similarity=-0.013 Sum_probs=106.0
Q ss_pred CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----eeeeee-ecCCeeEEE
Q 026765 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LSGENINIT 115 (233)
Q Consensus 41 D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~----~~~~~~-~~~~~~~~~ 115 (233)
...|+.-+++... . . .+......+..++|++.++.++.+-...+.|..+++.... ...... .-..+..++
T Consensus 91 ~~~I~~i~l~~~~--~-~--~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 91 RHEVRKMTLDRSE--Y-T--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp TTEEEEECTTSCS--C-E--EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred cceeEEEccCCcc--e-e--EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 4677777765321 1 1 1223446778999998766666666667889999886522 111111 113455688
Q ss_pred ECCC-CCeEEEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEe-C-CCeEEEEecCCceeeeEEeeec
Q 026765 116 YKPD-GTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTT-G-NGTVEVLTYPSLRPLDTVVAHT 191 (233)
Q Consensus 116 ~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~~~~~~ 191 (233)
+.+. ++..++-...+.|.+.++.......... .......++++|.+..+.... . .+.|...+.+.......+...-
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l 245 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 245 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence 8874 4445556667889999887544332222 223467889998766666654 3 4678888765322221122223
Q ss_pred CceeEEEECCCCCEEEEe-eCCCcEEEEecCC
Q 026765 192 AGCYCIAIDPMGRYFAVG-SADSLVSLWDISE 222 (233)
Q Consensus 192 ~~v~~i~~~p~~~~las~-s~dg~v~iwd~~~ 222 (233)
...+.|+++|++..|..+ +..+.|..+|++-
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 467899999877665544 4567899999863
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.93 E-value=0.0039 Score=48.28 Aligned_cols=177 Identities=7% Similarity=-0.001 Sum_probs=105.5
Q ss_pred CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeeec--CCeeEEEECC
Q 026765 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKP 118 (233)
Q Consensus 41 D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~ 118 (233)
...|+..+++....... ..+.+ ......++|++.++.++.+-...+.|..+++..+......... ..+..+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~--~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT--IVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCE--EEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEE--EEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 35677777764321111 11222 2346688999876667667677789999998765321111111 2345688886
Q ss_pred CC-CeEEEEcCCCcEEEEEcCCCeeeeee-ecCceeeEEEECCCCCEEEEEe--CCCeEEEEecCCceeeeEEe-eecCc
Q 026765 119 DG-THIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVV-AHTAG 193 (233)
Q Consensus 119 ~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~-~~~~~ 193 (233)
.+ +..++-...+.|.++++......... ........++++|.+..+..+. ..+.|..++.+- .....+. ..-..
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~ 167 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYW 167 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSC
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCC
Confidence 44 44455566788999998653322211 1123467888888766666665 357788877652 2222221 22345
Q ss_pred eeEEEECCCCCEE-EEeeCCCcEEEEecC
Q 026765 194 CYCIAIDPMGRYF-AVGSADSLVSLWDIS 221 (233)
Q Consensus 194 v~~i~~~p~~~~l-as~s~dg~v~iwd~~ 221 (233)
.+.++++|++..| .+=+..+.|..+|++
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 6899999966655 444566889999986
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.93 E-value=0.0089 Score=52.14 Aligned_cols=196 Identities=13% Similarity=0.115 Sum_probs=122.4
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe----c-CcCcEEEEEEcCCCCCEEEEEeCCCeEEEE
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR----G-HADSVDQLCWDPKHADLIATASGDKTVRLW 94 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~----~-h~~~v~~~~~~~~~~~~l~sg~~d~~i~iw 94 (233)
...|+++..+++|.+-+ |..++-|.+|+..... ....... + ....|.++...+++ .+. .|..++-|..|
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~---~~~~~~~~~~~~l~~~~V~~i~~d~~g-~lW-iGt~~~Gl~~~ 382 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNR---FKNIRNIPYKNSLSDNVVSCIVEDKDK-NLW-IGTNDGGLNLY 382 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGGS---SEEECCCTTSSSCSCSSEEEEEECTTS-CEE-EEESSSCEEEE
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCccc---ceEEcCCCCCCCCCCCeeEEEEECCCC-CEE-EEECCCCeEEE
Confidence 46799999988887554 5566778888764321 1111110 0 23468899887764 444 57777789999
Q ss_pred ECCCCeeeeeee--------e-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-----cCceeeEEEECCC
Q 026765 95 DARSGKCSQQAE--------L-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-----FGYEVNEIAWNMT 160 (233)
Q Consensus 95 d~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~~~~ 160 (233)
|..+++...... . ...+.++...++++.|.+|+.++.+..+|..+.+...-.. ....+.++...++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 987765433211 1 2345567777787756778887789999987654322111 1235778888887
Q ss_pred CCEEEEEeCCCeEEEEecCCceeeeEEe------eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVV------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 161 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
|++++... + -+.+++..+.+...... .....|.++..+++|++.+... +-+..||..++..
T Consensus 463 g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 463 GNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp SCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred CCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 87666554 4 47778876543321111 1235688999999888766443 4588888876654
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.92 E-value=0.0091 Score=52.08 Aligned_cols=193 Identities=10% Similarity=0.101 Sum_probs=118.8
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe-------cCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-------GHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
...|+++..+++|.+-+ |..++-+..|+.... ........ -....|.++...+++ .+|..|..++-|.
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~ 430 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQ---RFTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLS 430 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTC---CEEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEE
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCC---cEEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCcee
Confidence 45699999988887554 566667888876532 11111110 123568888887654 5244677777799
Q ss_pred EEECCCCeeeeeee-----ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-------cCceeeEEEECCC
Q 026765 93 LWDARSGKCSQQAE-----LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-------FGYEVNEIAWNMT 160 (233)
Q Consensus 93 iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~~~~~~~~~ 160 (233)
.||..+++...... ....+.++...+++...+ |+. +.+..||..+.+...... ....+.++...++
T Consensus 431 ~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 508 (795)
T 4a2l_A 431 ILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH 508 (795)
T ss_dssp EEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT
T ss_pred EEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCC
Confidence 99988776433221 123456677777776554 444 458889987654322111 1235778888888
Q ss_pred CCEEEEEeCCCeEEEEecCCceeeeEEe-------eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVV-------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 161 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
|+.++... + -+..++..+.+. .+. .....|.++..+++|++.++.. + -+..||..+...
T Consensus 509 g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 509 KRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQI 574 (795)
T ss_dssp CCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEE
T ss_pred CCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcE
Confidence 87766554 4 477777655443 221 1234688999999988665443 3 588888876643
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0011 Score=54.44 Aligned_cols=153 Identities=17% Similarity=0.169 Sum_probs=93.6
Q ss_pred EEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeeeeeeeecC----CeeEEEE-------CCCCCeEEEEcCCC------
Q 026765 69 VDQLCWDP-KHADLIATASGDKTVRLWDARSGKCSQQAELSG----ENINITY-------KPDGTHIAVGNRDD------ 130 (233)
Q Consensus 69 v~~~~~~~-~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~~~~~d~------ 130 (233)
...|+|+| ++.+++++-...+.|++.|+.++.......... ....++| ++++++|++....+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45789998 355566665555789999998877654433221 3567999 99999776665543
Q ss_pred -cEEEEEcCC-Ceee-----eeeecCceeeEEEECCCC-CEEEEEeCCCeEEEEecC-------Ccee-----------e
Q 026765 131 -ELTILDVRK-FKPI-----HRRKFGYEVNEIAWNMTG-EMFFLTTGNGTVEVLTYP-------SLRP-----------L 184 (233)
Q Consensus 131 -~i~i~d~~~-~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~-------~~~~-----------~ 184 (233)
.+.+++... .... ...........++.+|++ .++++-..++.+..++.. ++.. .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 255665332 1111 111111245677889954 455566678889999986 3332 1
Q ss_pred eEEe--eecCceeEEEECCCCCEE-EEeeCCCcEEEEecC
Q 026765 185 DTVV--AHTAGCYCIAIDPMGRYF-AVGSADSLVSLWDIS 221 (233)
Q Consensus 185 ~~~~--~~~~~v~~i~~~p~~~~l-as~s~dg~v~iwd~~ 221 (233)
..+. +.....+.|+|+|+|++| ++=+....|+.++.+
T Consensus 301 ~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 301 KQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1221 122346789999999954 444566788886653
No 291
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.85 E-value=0.0055 Score=47.28 Aligned_cols=174 Identities=9% Similarity=0.012 Sum_probs=103.8
Q ss_pred CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----Ceeeeeeeec-CCeeEEEE
Q 026765 42 QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS----GKCSQQAELS-GENINITY 116 (233)
Q Consensus 42 ~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~----~~~~~~~~~~-~~~~~~~~ 116 (233)
..|+..++..... .. .+ ........++|++.++.++++-..++.|..+++.. .......... ..+..+++
T Consensus 10 ~~I~~i~~~~~~~---~~-~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEY---TS-LI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp SSEEEEETTSCCC---EE-EE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CeEEEEECCCcce---Ee-hh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 5677777754221 11 12 23356778999987666777777778999999875 2211111111 23456888
Q ss_pred CCCCCeE-EEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEeC-C-CeEEEEecCCceeeeEEe-eec
Q 026765 117 KPDGTHI-AVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG-N-GTVEVLTYPSLRPLDTVV-AHT 191 (233)
Q Consensus 117 ~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~v~~~~~~~~~~~~~~~-~~~ 191 (233)
++.+..| ++-...+.|.++++.......... .......++++|.+..++.+.. . +.|..++.+. .....+. ..-
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~ 163 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENI 163 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSC
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCC
Confidence 8655444 555667889999986543222222 2235678899987666555543 3 6788877642 2222222 223
Q ss_pred CceeEEEECCCCCEEE-EeeCCCcEEEEecC
Q 026765 192 AGCYCIAIDPMGRYFA-VGSADSLVSLWDIS 221 (233)
Q Consensus 192 ~~v~~i~~~p~~~~la-s~s~dg~v~iwd~~ 221 (233)
...+.++++|++..|. +-+..+.|..+|++
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 4568999998776554 44456789999986
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.014 Score=50.80 Aligned_cols=196 Identities=17% Similarity=0.066 Sum_probs=115.0
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
...|.++...++|.+. .|..++-+.+|+.......... .........|.++...+++ .+. .|..++-+..+|..++
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~d~~g-~lW-igt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNK-ENRELLSNSVLCSLKDSEG-NLW-FGTYLGNISYYNTRLK 437 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTS-CEE-EEETTEEEEEECSSSC
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEcc-CCCCCCCcceEEEEECCCC-CEE-EEeccCCEEEEcCCCC
Confidence 4569999988877654 3444566777776431100000 0001234578888887654 444 4677677889998776
Q ss_pred eeeeeee---ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeec------CceeeEEEECCCCCEEEEEeCC
Q 026765 100 KCSQQAE---LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF------GYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 100 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+...... ....+.++...+++. +..|+. +.+..+|..+.+....... ...+.++...++|++++....+
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred cEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC
Confidence 5433221 123455677777765 444555 5688899765433221111 2357788888888766655445
Q ss_pred CeEEEEecCCceeeeEEee----ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 171 GTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 171 ~~v~~~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
| +..++..+.+. ..+.. ....|.++..+++|++.++. .+|.|..||..++.
T Consensus 516 G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 516 G-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp C-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred C-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 5 66677654432 22221 13468899999988865544 46765888887653
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.70 E-value=0.0082 Score=44.85 Aligned_cols=201 Identities=11% Similarity=0.169 Sum_probs=118.2
Q ss_pred eeeeCccccEEEEEECcCCCEEEE-EeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLAS-GSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s-~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~ 92 (233)
+.+.+-.+.+..++|+|+++.|++ ...++.|...|.. . .....+.+.+. ...-.+++.+++ .++++.-.++.+.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g-~v~~~i~l~g~-~D~EGIa~~~~g-~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--G-DLIRTIPLDFV-KDLETIEYIGDN-QFVISDERDYAIY 94 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--C-CEEEEEECSSC-SSEEEEEECSTT-EEEEEETTTTEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--C-CEEEEEecCCC-CChHHeEEeCCC-EEEEEECCCCcEE
Confidence 345566678999999998877665 4456665555543 1 22233333332 345667777664 4555655677888
Q ss_pred EEECCCCee---eeeeeec-------CCeeEEEECCCCCeEEEEcCCCcEEEEEcCC---Ceeeeeee--------cCce
Q 026765 93 LWDARSGKC---SQQAELS-------GENINITYKPDGTHIAVGNRDDELTILDVRK---FKPIHRRK--------FGYE 151 (233)
Q Consensus 93 iwd~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~--------~~~~ 151 (233)
++++..... ....... .....++++|++..|.++.+.....+|.... ...+.... .-..
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 888765432 1222111 1124699999998887777665555555431 11111110 1124
Q ss_pred eeEEEECCC-CCEEEEEeCCCeEEEEecCCceeeeEEeeec---------CceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 152 VNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT---------AGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
...++++|. +++++++..+..+..+|.. ++....+.-.. .....|+++|+|+.+++ ++.+.+++|...
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 567888775 4566677778888888865 44444433221 24578999999986555 666766666544
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.03 Score=48.71 Aligned_cols=196 Identities=13% Similarity=0.102 Sum_probs=114.4
Q ss_pred ccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe--------cCcCcEEEEEEcCCCCCEEEEEeCCCe
Q 026765 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR--------GHADSVDQLCWDPKHADLIATASGDKT 90 (233)
Q Consensus 19 H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~sg~~d~~ 90 (233)
....|+++..+++|.+- .|..++-|..++..... ....... -....|.++...+++ .+. .|..++-
T Consensus 311 ~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lW-igt~~~G 384 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIW-IGTWGGGINFISNAPPT---FHTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLW-IGTDGGG 384 (781)
T ss_dssp SSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCS---CEEEC----CCCSSCCSSSCEEEEEECTTS-CEE-EEEBSSC
T ss_pred CCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCc---ceeeccCccccccCCCCCcceEEEEEcCCC-CEE-EEeCCCc
Confidence 35679999998888754 45556777777764321 1111110 023568888887654 444 5665666
Q ss_pred EEEEECCCCeeeeee---e-ecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee---cCceeeEEEECCCCCE
Q 026765 91 VRLWDARSGKCSQQA---E-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEM 163 (233)
Q Consensus 91 i~iwd~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 163 (233)
|..||..++...... . ....+.++...+++. |.+|+.++.+..+|..+.+...... ....+.++...+++++
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence 888987654432211 1 123345677676765 4457766778889876544322111 1235777877777765
Q ss_pred EEEEeCCCeEEEEecCCceeeeEEeee-----cCceeEEEECCCCCEEEEeeCCCcEEEEecCCcE
Q 026765 164 FFLTTGNGTVEVLTYPSLRPLDTVVAH-----TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~ 224 (233)
++. +. +-+..++..+.+........ ...|.++..+++|++.+ |+.++-+..||.+...
T Consensus 464 wig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 464 WIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQL 526 (781)
T ss_dssp EEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCE
T ss_pred EEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCe
Confidence 554 44 45778887654332211111 35688999999887655 4444447778876553
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.54 E-value=0.037 Score=48.27 Aligned_cols=177 Identities=10% Similarity=0.005 Sum_probs=104.9
Q ss_pred CCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----eeeeee-ecCCeeEEE
Q 026765 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LSGENINIT 115 (233)
Q Consensus 41 D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~----~~~~~~-~~~~~~~~~ 115 (233)
...|+..++.... .. .+......+..++|++..+.++++-...+.|..+++.... ...... .-..+..++
T Consensus 403 ~~~Ir~i~l~~~~---~~--~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 403 RHEVRKMTLDRSE---YT--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp BSSEEEECTTSCC---CE--EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred ccceeEeeccCCc---ce--eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 4567776665321 11 1223345677899988766666676677889989886531 111111 113345688
Q ss_pred ECCCCCeE-EEEcCCCcEEEEEcCCCeeeeeee-cCceeeEEEECCCCCEEEEEe-CC-CeEEEEecCCceeeeEEeeec
Q 026765 116 YKPDGTHI-AVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTT-GN-GTVEVLTYPSLRPLDTVVAHT 191 (233)
Q Consensus 116 ~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~~~~~~~ 191 (233)
+.+.+..| ++-...+.|.+.++.......... .......+++++.+..++.+. ++ +.|...++........+...-
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 88776544 455667889999987543322222 223477899998766666554 33 678888775332222222233
Q ss_pred CceeEEEECCCCCEEEEe-eCCCcEEEEecCC
Q 026765 192 AGCYCIAIDPMGRYFAVG-SADSLVSLWDISE 222 (233)
Q Consensus 192 ~~v~~i~~~p~~~~las~-s~dg~v~iwd~~~ 222 (233)
...+.|+++|.+..|..+ .....|...|++-
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 567899999776655544 4557788888863
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.48 E-value=0.022 Score=44.12 Aligned_cols=190 Identities=11% Similarity=0.069 Sum_probs=98.5
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEEC--C
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA--R 97 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~--~ 97 (233)
.+.+..+.+.+++..++.+ .++.| |...... ........++...+..+.+.+++ .+++.+...+.++-+|- .
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG--~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSG--KNWQALVQEAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCE--EEESSTT--SSEEEEECSCCCCEEEEEECTTS-CEEEEETTSSEEEEECTTCS
T ss_pred CCCeEEEEEECCCCEEEEe-CCccE--EEEcCCC--CCCEEeecCCCcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCC
Confidence 3457788877777666655 35543 3322222 22222233455678899998864 56555544334444553 1
Q ss_pred CCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeee-----cCceeeEEEECCCCCEEEEEeCCCe
Q 026765 98 SGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-----FGYEVNEIAWNMTGEMFFLTTGNGT 172 (233)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (233)
+-+... .........+.+.+++..++ .+.++.+...+....+.-.... ....+..+.+.+++..++++. ++.
T Consensus 195 tW~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~ 271 (327)
T 2xbg_A 195 AWEPHN-RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA 271 (327)
T ss_dssp SCEEEE-CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC
T ss_pred ceeECC-CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCe
Confidence 212211 11223445678888887654 4456766665321111111111 122467788887776666554 565
Q ss_pred EEEEecCCceeeeEEe---eecCceeEEEECCCCCEEEEeeCCCcEEEEec
Q 026765 173 VEVLTYPSLRPLDTVV---AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (233)
Q Consensus 173 v~~~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~ 220 (233)
+. +..+.++.-..+. .....++++.+.++++ +++++.+|.|.-++-
T Consensus 272 i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 272 LL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 52 3333232222222 1235678888875544 556667887776653
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.19 E-value=0.001 Score=57.21 Aligned_cols=155 Identities=9% Similarity=-0.006 Sum_probs=89.6
Q ss_pred CcEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----Ceeeeeeee-cCCeeEEEECCCC-CeEEEEcCCCcEEEEEcCCC
Q 026765 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARS----GKCSQQAEL-SGENINITYKPDG-THIAVGNRDDELTILDVRKF 140 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~----~~~~~~~~~-~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~ 140 (233)
..+..++|++.++.++++-...+.|..+++.. ......... -..+..+++.+.+ +.+++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34567888887665655555678899999875 121111111 1123457777544 44445456678999988654
Q ss_pred eeeeeeec-CceeeEEEECCCCCEEEEEeC-C-CeEEEEecCCceeeeEEe-eecCceeEEEECCCCC-EEEEeeCCCcE
Q 026765 141 KPIHRRKF-GYEVNEIAWNMTGEMFFLTTG-N-GTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGR-YFAVGSADSLV 215 (233)
Q Consensus 141 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~-~las~s~dg~v 215 (233)
........ ......++++|.+..++.+.. . +.|..++.... ....+. ..-...+.|+++|++. ++++-+..+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 33222221 234677888887665555542 2 67777665422 112221 1223457899998765 44555567889
Q ss_pred EEEecCC
Q 026765 216 SLWDISE 222 (233)
Q Consensus 216 ~iwd~~~ 222 (233)
.++|++.
T Consensus 565 ~~~d~dG 571 (699)
T 1n7d_A 565 SSIDVNG 571 (699)
T ss_dssp EEECSSS
T ss_pred EEEccCC
Confidence 9999863
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.11 E-value=0.047 Score=41.37 Aligned_cols=188 Identities=10% Similarity=0.094 Sum_probs=93.3
Q ss_pred CCCEEEEEeCC-----CCEEEEecccCCCC-ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCC
Q 026765 31 TGTKLASGSVD-----QTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGD-----KTVRLWDARSG 99 (233)
Q Consensus 31 ~~~~l~s~~~D-----~~v~vW~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-----~~i~iwd~~~~ 99 (233)
++..++.|+.+ ..+.+||+...... ......++........+.. +.++++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 46677777765 35777776543200 2111111111111222222 24566777654 35788998887
Q ss_pred eeeeeeeecCCe--eEEEECCCCCeEEEEcCC-----CcEEEEEcCCCeeeeeeecCce-eeEEEECCCCCEEEEEeCC-
Q 026765 100 KCSQQAELSGEN--INITYKPDGTHIAVGNRD-----DELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTGN- 170 (233)
Q Consensus 100 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 170 (233)
+........... ..++. .+++.++.|+.+ ..+..||+.+.+.........+ ........+++.++.|+.+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 654432222111 12222 256666677654 4588899877654332221111 1111112256666776653
Q ss_pred ----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC-----CcEEEEecCCcE
Q 026765 171 ----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-----SLVSLWDISEML 224 (233)
Q Consensus 171 ----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d-----g~v~iwd~~~~~ 224 (233)
..+.+||..+.+ .+..+........++.+ ++++++.|+.+ ..|.+||+++.+
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 467888876543 22211111111122233 56777888765 357889987664
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.07 E-value=0.071 Score=41.74 Aligned_cols=201 Identities=16% Similarity=0.162 Sum_probs=104.1
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe---cCcCcEEEEEEcCC---CCCEEEEEeCC
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR---GHADSVDQLCWDPK---HADLIATASGD 88 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~l~sg~~d 88 (233)
.+...-..-+.++|.|+|.++++ ..++.|++++ . .. ......++ .-......++++|+ ++.+.++-..+
T Consensus 25 ~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~--g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 25 EVVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR-E--GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp EEECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE-T--TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE-C--CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 34333445679999999986665 4568888887 2 11 11111111 11346788999997 45555554432
Q ss_pred -----CeEEEEECCCCeee---eeee-ec------CCeeEEEECCCCCeEEEEcC-------------CCcEEEEEcCCC
Q 026765 89 -----KTVRLWDARSGKCS---QQAE-LS------GENINITYKPDGTHIAVGNR-------------DDELTILDVRKF 140 (233)
Q Consensus 89 -----~~i~iwd~~~~~~~---~~~~-~~------~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~ 140 (233)
..|..++...+... ..+. .. +....++|.|+|...++.+. .++|.-++....
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 56777877643211 1111 11 12346999999976555432 144555554320
Q ss_pred ------------eeeeeeecC-ceeeEEEECC-CCCEEEEEeCCCe--------EEEEecCC----------------ce
Q 026765 141 ------------KPIHRRKFG-YEVNEIAWNM-TGEMFFLTTGNGT--------VEVLTYPS----------------LR 182 (233)
Q Consensus 141 ------------~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~--------v~~~~~~~----------------~~ 182 (233)
........+ .....++|++ +++++++-...+. +.+...-. ..
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 000111111 2366789999 6776666554443 33332110 01
Q ss_pred eeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 183 PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 183 ~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
+...+ .+......++| .+|..+++.-..+.|...+++.
T Consensus 260 p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~ 297 (352)
T 2ism_A 260 PLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEG 297 (352)
T ss_dssp CSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEE
T ss_pred CeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECC
Confidence 22222 11223456677 4666666666667777777653
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.04 E-value=0.071 Score=41.20 Aligned_cols=185 Identities=14% Similarity=0.152 Sum_probs=93.2
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeE-EEEECCC
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV-RLWDARS 98 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i-~iwd~~~ 98 (233)
...++++.|++ +..++ ++.++.| +.................+...+..+.+.+++ .+++. +.++.| +-.| .
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~~~g~v~~S~D--g 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNG-SAEMI-TNVGAIYRTKD--S 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETT-EEEEE-ETTCCEEEESS--T
T ss_pred CccEEEEEecC-CeEEE-EECCCeE--EEECCCCCCceECccccCCCCCeEEEEEECCC-CEEEE-eCCccEEEEcC--C
Confidence 44688999976 44444 4556644 33322222221110001123456677765543 45544 445543 3333 2
Q ss_pred Ce-eeeee-eecCCeeEEEECCCCCeEEEEcCCCcEEEEEc--CCCeeeeeeecCceeeEEEECCCCCEEEEEeCCCeEE
Q 026765 99 GK-CSQQA-ELSGENINITYKPDGTHIAVGNRDDELTILDV--RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVE 174 (233)
Q Consensus 99 ~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 174 (233)
++ ..... ........+.+.|++.+++++......+-.|- .+.+.+.. .....+..+.+.++++.+ +.+.+|.+.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~-~~~~~G~~~ 228 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLW-MIVNGGKIA 228 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEE-EEETTTEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEE-EEeCCceEE
Confidence 22 11111 11234567888998887776654443344442 33444321 223456778888888765 445567766
Q ss_pred EEecCCceeeeEEe----eecCceeEEEECCCCCEEEEeeCCCcE
Q 026765 175 VLTYPSLRPLDTVV----AHTAGCYCIAIDPMGRYFAVGSADSLV 215 (233)
Q Consensus 175 ~~~~~~~~~~~~~~----~~~~~v~~i~~~p~~~~las~s~dg~v 215 (233)
..+.+.++.-..+. .+...+.++++.|++..++++. +|.|
T Consensus 229 ~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 229 FSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred EecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 65322122222111 1223578899998877777654 5655
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.88 E-value=0.17 Score=42.98 Aligned_cols=198 Identities=6% Similarity=-0.037 Sum_probs=118.5
Q ss_pred ccEEEEEECcCCCEEEEEe-CCCCEEEEecccCCCCceeeEEEec------CcCcEEEEEEcCCCCCEEEEEeCCCeEEE
Q 026765 21 KKVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRG------HADSVDQLCWDPKHADLIATASGDKTVRL 93 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~l~sg~~d~~i~i 93 (233)
..+.+++|++.+..|.-+. ..+.|+.++.+. .... .+ +.. .......++++..+.++..+-+..+.|.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g--~~~~-~v-~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v 415 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDG--SQGF-TV-VVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINV 415 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCE-EE-EC--------CCCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCC--CCce-EE-EEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEE
Confidence 4578999998776665544 467777776542 1111 11 111 23457889998877777777778889999
Q ss_pred EECCCCeeeeeeee--cCCeeEEEECC-CCCeEEEEcCCC--cEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE
Q 026765 94 WDARSGKCSQQAEL--SGENINITYKP-DGTHIAVGNRDD--ELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 94 wd~~~~~~~~~~~~--~~~~~~~~~~~-~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (233)
.++.... ...+.. -..+..+++.| .|..+++-.... .|...++........... -...+.+++.+..+.+..+
T Consensus 416 ~~~~G~~-~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 416 TRLDGRS-VGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp EETTSCE-EEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EECCCCe-EEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEE
Confidence 9986443 222222 24567899999 454444433333 566666654332211111 1246788998887666665
Q ss_pred e-CCCeEEEEecCCceeeeEEe-eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEE
Q 026765 168 T-GNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 168 ~-~~~~v~~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~ 225 (233)
. ..+.|..++++. .....+. ........+++.. +..+.+=...+.|...|..+++.
T Consensus 495 D~~~~~I~~~~~dG-~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~ 552 (628)
T 4a0p_A 495 DSDLRRIESSDLSG-ANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREG 552 (628)
T ss_dssp ETTTTEEEEEETTS-CSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSC
T ss_pred eCCCCEEEEEeCCC-CceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCC
Confidence 4 568898888753 2223332 2334467788765 55556655667788888776653
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.81 E-value=0.12 Score=40.47 Aligned_cols=194 Identities=11% Similarity=0.084 Sum_probs=107.4
Q ss_pred EEEEECcCCCEEEEEe------------CCCCEEEEecccCCCCceeeEEEec-----CcCcEEEEEEcC--CCC-CEEE
Q 026765 24 HSVAWNCTGTKLASGS------------VDQTARVWHIEPHGHGKVKDIELRG-----HADSVDQLCWDP--KHA-DLIA 83 (233)
Q Consensus 24 ~~~~~~~~~~~l~s~~------------~D~~v~vW~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~--~~~-~~l~ 83 (233)
-.+...|+|..+++++ .+|.|.++|++... .....+.+.+ ..-....+.+.+ ++. .+++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~-~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-PAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS-CCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC-CceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3555678775555542 68989999876322 2233344443 123455666654 232 2444
Q ss_pred EEeC--CCeEEEEECCCC--eeeeeeeecC----CeeEEEECCCCCeEEEEcC-----------------CCcEEEEEcC
Q 026765 84 TASG--DKTVRLWDARSG--KCSQQAELSG----ENINITYKPDGTHIAVGNR-----------------DDELTILDVR 138 (233)
Q Consensus 84 sg~~--d~~i~iwd~~~~--~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~ 138 (233)
+-.. +.+|.+|++... .........+ ....+.+.++|...++... .+.+.-+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 4333 567888876543 2222212222 2346888888887665431 1334444442
Q ss_pred CCeeeeeeecCceeeEEEECCCCCEEEEE-eCCCeEEEEecCC-cee--eeEEeeecCceeEEEECC-CCCEEEEeeCC-
Q 026765 139 KFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGTVEVLTYPS-LRP--LDTVVAHTAGCYCIAIDP-MGRYFAVGSAD- 212 (233)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~--~~~~~~~~~~v~~i~~~p-~~~~las~s~d- 212 (233)
..+.+ ..--...+.++|+|+++.+.++ +..+.+..|++.. ++. ...+ ......-.+++++ +|++.+++..+
T Consensus 212 ~~~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 212 DVRVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp CCEEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred eEEEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCc
Confidence 21111 1111247899999999887766 4578999998853 221 1223 2234556789999 59988877644
Q ss_pred CcEEEEecC
Q 026765 213 SLVSLWDIS 221 (233)
Q Consensus 213 g~v~iwd~~ 221 (233)
+.|..||..
T Consensus 289 ~~v~~~~P~ 297 (355)
T 3sre_A 289 MRIFFYDAE 297 (355)
T ss_dssp HHHHSCCTT
T ss_pred eEEEEECCC
Confidence 345555544
No 303
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.80 E-value=0.078 Score=40.19 Aligned_cols=142 Identities=14% Similarity=0.154 Sum_probs=73.1
Q ss_pred CCEEEEEeCCC-----eEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCC-------CcEEEEEcCCCeeee
Q 026765 79 ADLIATASGDK-----TVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD-------DELTILDVRKFKPIH 144 (233)
Q Consensus 79 ~~~l~sg~~d~-----~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~ 144 (233)
..+++.|+.++ .+.+||..+.+........... ..++. .+++.++.|+.+ ..+.+||+.+.+...
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 45667777553 5778898877654432222111 12222 255566666542 347889987655433
Q ss_pred eeecCc--eeeEEEECCCCCEEEEEeCC-----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCCC--
Q 026765 145 RRKFGY--EVNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS-- 213 (233)
Q Consensus 145 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~dg-- 213 (233)
...... .-..+. ..+++.++.|+.+ ..+.+||..+.+ .+..+.........+.+ ++++++.|+.++
T Consensus 188 ~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~ 264 (302)
T 2xn4_A 188 IAEMSTRRSGAGVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC 264 (302)
T ss_dssp ECCCSSCCBSCEEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS
T ss_pred CCCCccccccccEE-EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc
Confidence 222111 111111 2256677776653 467888876543 22211110011112222 567788887664
Q ss_pred ---cEEEEecCCcE
Q 026765 214 ---LVSLWDISEML 224 (233)
Q Consensus 214 ---~v~iwd~~~~~ 224 (233)
.+.+||+.+.+
T Consensus 265 ~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 265 NLASVEYYNPTTDK 278 (302)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccccEEEEcCCCCe
Confidence 48899988664
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.74 E-value=0.14 Score=40.13 Aligned_cols=132 Identities=14% Similarity=0.161 Sum_probs=75.0
Q ss_pred CCCeEEEEECCCCe-eeeeeeecC--------CeeEEEECC--CCC-eE-EEEcC--CCcEEEEEcCCC--eeee--eee
Q 026765 87 GDKTVRLWDARSGK-CSQQAELSG--------ENINITYKP--DGT-HI-AVGNR--DDELTILDVRKF--KPIH--RRK 147 (233)
Q Consensus 87 ~d~~i~iwd~~~~~-~~~~~~~~~--------~~~~~~~~~--~~~-~l-~~~~~--d~~i~i~d~~~~--~~~~--~~~ 147 (233)
.+|.|.++|..+.. ....+...+ ....+.+.+ ++. +| ++-.. +..+.+|++... .... ...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987431 122222222 233455433 454 34 44343 456788776542 2211 111
Q ss_pred c--CceeeEEEECCCCCEEEEEe-----------------CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEE
Q 026765 148 F--GYEVNEIAWNMTGEMFFLTT-----------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAV 208 (233)
Q Consensus 148 ~--~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las 208 (233)
. -...+.+...++|.+++... ..|.+..++. .+ ...+...-...+.++|+|+++.|..
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEE
Confidence 1 12468888889998777654 1244444443 32 2333333455789999999987655
Q ss_pred ee-CCCcEEEEecC
Q 026765 209 GS-ADSLVSLWDIS 221 (233)
Q Consensus 209 ~s-~dg~v~iwd~~ 221 (233)
+. ..+.|..|++.
T Consensus 238 adt~~~~I~~~~~~ 251 (355)
T 3sre_A 238 AELLAHKIHVYEKH 251 (355)
T ss_dssp EEGGGTEEEEEEEC
T ss_pred EeCCCCeEEEEEEC
Confidence 54 57889999986
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.73 E-value=0.089 Score=39.97 Aligned_cols=143 Identities=11% Similarity=0.096 Sum_probs=73.2
Q ss_pred CCEEEEEeCC----CeEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCC------CcEEEEEcCCCeeeeee
Q 026765 79 ADLIATASGD----KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD------DELTILDVRKFKPIHRR 146 (233)
Q Consensus 79 ~~~l~sg~~d----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~ 146 (233)
..+++.|+.+ ..+.+||..+.+........... ..++. .+++.++.|+.+ ..+.+||+.+.+.....
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 4577777755 66888999887654432222111 12222 255666677654 45888998776543322
Q ss_pred ecCce-eeEEEECCCCCEEEEEeC---------CCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC--
Q 026765 147 KFGYE-VNEIAWNMTGEMFFLTTG---------NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-- 212 (233)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d-- 212 (233)
....+ ........+++.++.|+. ...+.+||..+.+ .+..+......-..+.+ ++++++.|+.+
T Consensus 135 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 135 SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGL 212 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCC
Confidence 11111 111111125666666653 3457788876542 22111110111112223 56677777754
Q ss_pred ---CcEEEEecCCcE
Q 026765 213 ---SLVSLWDISEML 224 (233)
Q Consensus 213 ---g~v~iwd~~~~~ 224 (233)
..+.+||+.+.+
T Consensus 213 ~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEBCCEEEEETTTTE
T ss_pred CCCceEEEeeCCCCc
Confidence 357888887653
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.63 E-value=0.26 Score=41.74 Aligned_cols=197 Identities=8% Similarity=-0.021 Sum_probs=110.9
Q ss_pred ccEEEEEECcCCCEEEEE-eCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 21 KKVHSVAWNCTGTKLASG-SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~-~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
..+.+++|++.+..|.-+ ...+.|+.++++.. .. . ..+.........++++..++++..+-...+.|.+.++...
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~--~~-~-~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS--GS-Q-FVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SC-E-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC--cc-E-EEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 346788998866555444 45677777776532 11 1 1122223456678887666667777677889999998754
Q ss_pred eeeeeee-ecCCeeEEEECCCCCeEEEEc--CCCcEEEEEcCCCeeeeeeec-CceeeEEEECCCCCEEEEE-eCCCeEE
Q 026765 100 KCSQQAE-LSGENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTVE 174 (233)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~v~ 174 (233)
....... .-..+..+++.|....|.... ....|...++........... -...+.++++++.+.+..+ ...+.|.
T Consensus 425 ~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 425 MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence 3222111 113467799998644444333 235676666654322211111 1346788898866666555 4567888
Q ss_pred EEecCCceeeeEE-eeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 175 VLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 175 ~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
.+++.... ...+ .........+++..+ ..+.+-...+.|..-|..++
T Consensus 505 ~~~~dG~~-~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 505 VMNTDGTG-RRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEESSSCC-CEEEEECCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred EEecCCCc-eEEEeccCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 88875322 1222 122223345666543 44455555667777777665
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.55 E-value=0.19 Score=39.23 Aligned_cols=58 Identities=14% Similarity=0.267 Sum_probs=36.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEecCCcee------eeEEeeecCceeEEEECCCCCEEEEee
Q 026765 152 VNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP------LDTVVAHTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~v~~i~~~p~~~~las~s 210 (233)
...+++ .+|+.++..-..+.|...+++.... ...+......+..+++.|+|.++++..
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 445666 4667766666777888777643221 122222335788999999998766654
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.54 E-value=0.3 Score=44.60 Aligned_cols=145 Identities=8% Similarity=0.125 Sum_probs=84.3
Q ss_pred EcCCCCCEEEEEe----------CCCeEEEEECCCCeee--eeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCe
Q 026765 74 WDPKHADLIATAS----------GDKTVRLWDARSGKCS--QQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141 (233)
Q Consensus 74 ~~~~~~~~l~sg~----------~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 141 (233)
|..+...+++.|. ..|.|.+|++..++.. ......+.+.+++-- +| +++++- ..++.+|++...+
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEK 915 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTS
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCc
Confidence 4333345777765 3588999998755432 334455666665422 35 444433 4789999987654
Q ss_pred eee-eeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCc-eeeeEEee--ecCceeEEEECCCCCEEEEeeCCCcEEE
Q 026765 142 PIH-RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL-RPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSL 217 (233)
Q Consensus 142 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~--~~~~v~~i~~~p~~~~las~s~dg~v~i 217 (233)
.+. ....-..+..+.....++++++|+.-..+.++.++.. ..+..+.. +...++++.+--+ ..++.+..+|.+.+
T Consensus 916 ~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~v 994 (1158)
T 3ei3_A 916 ELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFV 994 (1158)
T ss_dssp CEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEE
T ss_pred eEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEE
Confidence 332 1111111222233335789999998888887765422 22223332 3345677776433 47777999999999
Q ss_pred EecCC
Q 026765 218 WDISE 222 (233)
Q Consensus 218 wd~~~ 222 (233)
.....
T Consensus 995 l~~~~ 999 (1158)
T 3ei3_A 995 CQKDS 999 (1158)
T ss_dssp EEECT
T ss_pred EecCC
Confidence 87654
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.53 E-value=0.17 Score=38.38 Aligned_cols=186 Identities=8% Similarity=0.057 Sum_probs=91.6
Q ss_pred CCCEEEEEeCC----CCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC------CeEEEEECCCCe
Q 026765 31 TGTKLASGSVD----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD------KTVRLWDARSGK 100 (233)
Q Consensus 31 ~~~~l~s~~~D----~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d------~~i~iwd~~~~~ 100 (233)
++..++.|+.+ ..+.+||+... .......++........+.. +.++++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777765 45666665432 11111111111111222222 34577777765 458899998876
Q ss_pred eeeeeeecCCe--eEEEECCCCCeEEEEcC---------CCcEEEEEcCCCeeeeeeecCce-eeEEEECCCCCEEEEEe
Q 026765 101 CSQQAELSGEN--INITYKPDGTHIAVGNR---------DDELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 101 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 168 (233)
........... ..++. .+++.++.|+. ...+.+||+.+.+.........+ ........+++.++.|+
T Consensus 130 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 208 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGG 208 (306)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred eEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeC
Confidence 54432222111 12222 25556666653 34478899877654332222111 11111112566666665
Q ss_pred CC-----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC-----CcEEEEecCCcE
Q 026765 169 GN-----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-----SLVSLWDISEML 224 (233)
Q Consensus 169 ~~-----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d-----g~v~iwd~~~~~ 224 (233)
.+ ..+.+||..+.+ .+..+........++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 43 457788876532 22222111111223333 56778888754 458889988764
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.38 E-value=0.29 Score=39.32 Aligned_cols=128 Identities=9% Similarity=0.172 Sum_probs=78.6
Q ss_pred CCCeEEEEECCCCeeeeeeeec-----CCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCe----------ee--eeeec-
Q 026765 87 GDKTVRLWDARSGKCSQQAELS-----GENINITYKPDGTHIAVGNRDDELTILDVRKFK----------PI--HRRKF- 148 (233)
Q Consensus 87 ~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------~~--~~~~~- 148 (233)
.++.||.-++.....-+.+... ..+..+..+|+|+++|..+.. .+.|..+.... .+ ..+..
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcC
Confidence 3467777776633222222222 134568899999999988654 67887765211 01 11221
Q ss_pred ------CceeeEEEECCCC---CEEEEEeCCCeEEEEecCCc--eeeeEEe---------eecCceeEEEECCCCCEEEE
Q 026765 149 ------GYEVNEIAWNMTG---EMFFLTTGNGTVEVLTYPSL--RPLDTVV---------AHTAGCYCIAIDPMGRYFAV 208 (233)
Q Consensus 149 ------~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~--~~~~~~~---------~~~~~v~~i~~~p~~~~las 208 (233)
..++..+.|||-+ ..+++-..|+.+++||+... ++. .+. .....|.+++|++++-.|..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 2458899999975 57999999999999998641 222 221 12256788899887654444
Q ss_pred --eeCCCcEE
Q 026765 209 --GSADSLVS 216 (233)
Q Consensus 209 --~s~dg~v~ 216 (233)
.+++|-|+
T Consensus 197 l~~t~~GDIY 206 (452)
T 3pbp_A 197 LNTTEGGDIF 206 (452)
T ss_dssp EECTTSCEEE
T ss_pred EecCCCCCEE
Confidence 33666553
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.16 E-value=0.079 Score=38.57 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=60.9
Q ss_pred eeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCcee--------eEEEECCCCCEEEEEeCCCeEEEEecCCce
Q 026765 111 NINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEV--------NEIAWNMTGEMFFLTTGNGTVEVLTYPSLR 182 (233)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 182 (233)
...++|+|++...++ .++.+.-.+..+.....=......+ ..+.|.++|.+.++ .||.+.-++.++..
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCC
Confidence 347999999987666 6676655554331110000011223 57889999998888 55888877754322
Q ss_pred eee-----EEe--eecCceeEEEECCCCCEEEEeeCCCcEE
Q 026765 183 PLD-----TVV--AHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (233)
Q Consensus 183 ~~~-----~~~--~~~~~v~~i~~~p~~~~las~s~dg~v~ 216 (233)
... ... ..-..+..|.+.|+|.+.|.. |+.++
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 110 111 112467899999999988877 77653
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.12 E-value=0.31 Score=37.13 Aligned_cols=143 Identities=13% Similarity=0.151 Sum_probs=72.3
Q ss_pred CCEEEEEeCC--------CeEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcC-C-----CcEEEEEcCCCee
Q 026765 79 ADLIATASGD--------KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNR-D-----DELTILDVRKFKP 142 (233)
Q Consensus 79 ~~~l~sg~~d--------~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~-d-----~~i~i~d~~~~~~ 142 (233)
..+++.|+.+ ..+.+||..+.+........... .+++. .+++.++.|+. + ..+.+||+.+.+.
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 4566777642 45888999887654332222111 12222 35556666765 2 3588899876544
Q ss_pred eeeeecCce-eeEEEECCCCCEEEEEeCCC-----eEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCCC-
Q 026765 143 IHRRKFGYE-VNEIAWNMTGEMFFLTTGNG-----TVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS- 213 (233)
Q Consensus 143 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~dg- 213 (233)
........+ ....+...+++.++.|+.++ .+.+||..+.+ .+..+........++.+ ++++++.|+.++
T Consensus 178 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~ 255 (315)
T 4asc_A 178 KELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATL 255 (315)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEE
T ss_pred EECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcccc
Confidence 322211111 11111122667777776543 57777776542 22211111111122233 567777777642
Q ss_pred -------------cEEEEecCCcE
Q 026765 214 -------------LVSLWDISEML 224 (233)
Q Consensus 214 -------------~v~iwd~~~~~ 224 (233)
.+.+||+++.+
T Consensus 256 ~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 256 ETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CcCCccccccccCcEEEecCCCCh
Confidence 36788887664
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.00 E-value=0.31 Score=39.18 Aligned_cols=113 Identities=13% Similarity=0.192 Sum_probs=72.7
Q ss_pred cEEEEEECcCCCEEEEEeCCCCEEEEecccCC---C-----Ccee--eEEEec----CcCcEEEEEEcCCCCC--EEEEE
Q 026765 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHG---H-----GKVK--DIELRG----HADSVDQLCWDPKHAD--LIATA 85 (233)
Q Consensus 22 ~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~---~-----~~~~--~~~~~~----h~~~v~~~~~~~~~~~--~l~sg 85 (233)
.|..+..||+|++||..+ +..|.|-.+.... . ..+. ...+.. ...+|..+.|||-+.. .|++=
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 567799999999999886 5688887765211 0 0111 122211 2467999999997533 67788
Q ss_pred eCCCeEEEEECCCCeee-eeee-----ec-----CCeeEEEECCCCCeEEEEc--CCCcEEEE
Q 026765 86 SGDKTVRLWDARSGKCS-QQAE-----LS-----GENINITYKPDGTHIAVGN--RDDELTIL 135 (233)
Q Consensus 86 ~~d~~i~iwd~~~~~~~-~~~~-----~~-----~~~~~~~~~~~~~~l~~~~--~d~~i~i~ 135 (233)
..|+.|++||+...... ..+. +. ..+.+++|..++-.|.+.+ +.|.|.-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 89999999999753211 1111 11 3456788988887776644 66766543
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.75 E-value=0.44 Score=35.91 Aligned_cols=143 Identities=13% Similarity=0.065 Sum_probs=73.3
Q ss_pred CCEEEEEeCC-----CeEEEEECCCCe---eeeeeeecCC--eeEEEECCCCCeEEEEcCC-----CcEEEEEcCCCeee
Q 026765 79 ADLIATASGD-----KTVRLWDARSGK---CSQQAELSGE--NINITYKPDGTHIAVGNRD-----DELTILDVRKFKPI 143 (233)
Q Consensus 79 ~~~l~sg~~d-----~~i~iwd~~~~~---~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 143 (233)
..+++.|+.+ ..+.+||..+.+ .......... ...++. .+++.++.|+.+ ..+.+||+.+.+..
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 4577777755 468899988766 4332222111 112222 255666666644 35788998765543
Q ss_pred eeeecCce-eeEEEECCCCCEEEEEeCC-----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC---
Q 026765 144 HRRKFGYE-VNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD--- 212 (233)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d--- 212 (233)
.......+ ........+++.++.|+.+ ..+.+||..+.+ .+..+........++.+ ++++++.|+.+
T Consensus 142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS
T ss_pred ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCc
Confidence 32222111 1111112256667776543 467788876542 22111111111122223 56777888765
Q ss_pred --CcEEEEecCCcE
Q 026765 213 --SLVSLWDISEML 224 (233)
Q Consensus 213 --g~v~iwd~~~~~ 224 (233)
..+.+||+.+.+
T Consensus 220 ~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 220 HLSSVEAYNIRTDS 233 (301)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccceEEEEeCCCCc
Confidence 458889988664
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.65 E-value=0.58 Score=36.59 Aligned_cols=203 Identities=14% Similarity=0.084 Sum_probs=105.7
Q ss_pred eeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe---cCcCcEEEEEEcCC---CCCEEEEEeC-
Q 026765 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR---GHADSVDQLCWDPK---HADLIATASG- 87 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~l~sg~~- 87 (233)
.+..--..-..++|.|+|.++++ ..++.|++++.. . ......++ .-......++++|+ ++.+.++-..
T Consensus 23 ~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G--~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLISPS--G--KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp EEECSCSCEEEEEEEETTEEEEE-ETTTEEEEECSS--C--EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred EEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--C--ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 33333455679999999986655 456888887632 1 11111111 11245788999997 5555555432
Q ss_pred --C----CeEEEEECCCC--eee--e-e---eeec--CCeeEEEECCCCCeEEEEcC-------------CCcEEEEEcC
Q 026765 88 --D----KTVRLWDARSG--KCS--Q-Q---AELS--GENINITYKPDGTHIAVGNR-------------DDELTILDVR 138 (233)
Q Consensus 88 --d----~~i~iwd~~~~--~~~--~-~---~~~~--~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~ 138 (233)
+ ..|..|+.... ... . . +... +....++|.|||...++.+. .++|.-++..
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 3 56777776543 111 1 1 1111 12345899999986665432 1345444443
Q ss_pred CCe-------eeeeeecC-ceeeEEEECC-CCCEEEEEeCCC---eEEEEecCC----------------ceeeeEEeee
Q 026765 139 KFK-------PIHRRKFG-YEVNEIAWNM-TGEMFFLTTGNG---TVEVLTYPS----------------LRPLDTVVAH 190 (233)
Q Consensus 139 ~~~-------~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~---~v~~~~~~~----------------~~~~~~~~~~ 190 (233)
..- .......+ .....++|++ +++++++-...+ .+.+...-. ..++..+...
T Consensus 178 G~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 210 00111112 2356789999 676666554432 233332100 0122222011
Q ss_pred cCceeEEEE-------CCCCCEEEEeeCCCcEEEEecCC
Q 026765 191 TAGCYCIAI-------DPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 191 ~~~v~~i~~-------~p~~~~las~s~dg~v~iwd~~~ 222 (233)
...+..+++ ..+|.++++.-..+.|...+++.
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 224567777 35677777766777888888874
No 316
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.37 E-value=0.27 Score=40.94 Aligned_cols=110 Identities=9% Similarity=0.100 Sum_probs=71.2
Q ss_pred eecCCeeEEEECCCCCeEEEEc-CCCcEEEEEcCCCee-------------eeeeecCceeeEEEECCCCCEEEEEeCCC
Q 026765 106 ELSGENINITYKPDGTHIAVGN-RDDELTILDVRKFKP-------------IHRRKFGYEVNEIAWNMTGEMFFLTTGNG 171 (233)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (233)
.....+-.+.++|||+++++++ .+.++.++|.++... +-..+.+......+|.++|+...+---|.
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecc
Confidence 3344445688899999988665 568899999874211 22334566778899999996666666899
Q ss_pred eEEEEecCCc----------eeeeEEeeecCceeEE-----EECCCCCEEEEee---CCCcE
Q 026765 172 TVEVLTYPSL----------RPLDTVVAHTAGCYCI-----AIDPMGRYFAVGS---ADSLV 215 (233)
Q Consensus 172 ~v~~~~~~~~----------~~~~~~~~~~~~v~~i-----~~~p~~~~las~s---~dg~v 215 (233)
.+.-|++... ..+..+..|-.+-.-. .-.|+|++|++.. .|+.+
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl 461 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFL 461 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSC
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCc
Confidence 9999997542 2344444443322111 2367888888865 46544
No 317
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.27 E-value=0.7 Score=35.18 Aligned_cols=142 Identities=13% Similarity=0.172 Sum_probs=71.7
Q ss_pred CCEEEEEeCC-------CeEEEEECCCCeeeeeeeecCCee--EEEECCCCCeEEEEcC------CCcEEEEEcCCCeee
Q 026765 79 ADLIATASGD-------KTVRLWDARSGKCSQQAELSGENI--NITYKPDGTHIAVGNR------DDELTILDVRKFKPI 143 (233)
Q Consensus 79 ~~~l~sg~~d-------~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~ 143 (233)
..+++.|+.+ ..+.+||..+.+............ .++. .+++.++.|+. ...+.+||+.+.+..
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 4566777754 347788988876544322222111 1222 35566666664 235889998776543
Q ss_pred eeeecCc--eeeEEEECCCCCEEEEEeCC-----CeEEEEecCCc--eeeeEEeeecCceeEEEECCCCCEEEEeeCC--
Q 026765 144 HRRKFGY--EVNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSL--RPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-- 212 (233)
Q Consensus 144 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~~~~v~~i~~~p~~~~las~s~d-- 212 (233)
....... ....+. ..+++.++.|+.+ ..+.+||..+. +.+..+.........+.+ ++++++.|+.+
T Consensus 189 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (318)
T 2woz_A 189 DLAPMKTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMI 265 (318)
T ss_dssp EECCCSSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCB
T ss_pred ECCCCCCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeecc
Confidence 3222111 111111 1256777776543 34667776543 222221111111122222 46777777754
Q ss_pred ------------CcEEEEecCCcE
Q 026765 213 ------------SLVSLWDISEML 224 (233)
Q Consensus 213 ------------g~v~iwd~~~~~ 224 (233)
..+.+||+.+.+
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp C----CCBCCBCCCEEEEETTTTE
T ss_pred CCCCceeccceeeeEEEEeCCCCE
Confidence 357788887754
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.25 E-value=0.68 Score=34.89 Aligned_cols=142 Identities=15% Similarity=0.195 Sum_probs=72.3
Q ss_pred CCEEEEEeCC-----CeEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCCC-----cEEEEEcCCCeeeeee
Q 026765 79 ADLIATASGD-----KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRDD-----ELTILDVRKFKPIHRR 146 (233)
Q Consensus 79 ~~~l~sg~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~ 146 (233)
..+++.|+.+ ..+.+||..+.+........... ..++. .++..++.|+.++ .+.+||+.+.+.....
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 4577777754 35788998887654432222111 12222 2556666676543 4678888765543322
Q ss_pred ecCce--eeEEEECCCCCEEEEEeC-------CCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCCC--
Q 026765 147 KFGYE--VNEIAWNMTGEMFFLTTG-------NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS-- 213 (233)
Q Consensus 147 ~~~~~--~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~dg-- 213 (233)
....+ -..+. ..+++.++.|+. ...+.+||..+.+ .+..+........++.+ ++++++.|+.++
T Consensus 141 ~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 141 PMNTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPL 217 (302)
T ss_dssp CCSSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSS
T ss_pred CCCCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCc
Confidence 21111 11111 125666666653 2457788876542 22111111111122223 567778887653
Q ss_pred ---cEEEEecCCcE
Q 026765 214 ---LVSLWDISEML 224 (233)
Q Consensus 214 ---~v~iwd~~~~~ 224 (233)
.+.+||+.+.+
T Consensus 218 ~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 218 VRKSVEVYDPTTNA 231 (302)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccceEEEEeCCCCC
Confidence 58889987654
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.07 E-value=0.8 Score=34.71 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=73.0
Q ss_pred CCEEEEEeCC-----CeEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCC-----CcEEEEEcCCCeeeeee
Q 026765 79 ADLIATASGD-----KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD-----DELTILDVRKFKPIHRR 146 (233)
Q Consensus 79 ~~~l~sg~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~ 146 (233)
.++++.|+.+ ..+.+||..+.+........... ..++.. ++..++.|+.+ ..+.+||+.+.+.....
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence 4566676643 35788998887654432222111 122222 55666666654 45888998765543221
Q ss_pred ecCc--e-eeEEEECCCCCEEEEEeCC-----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC----
Q 026765 147 KFGY--E-VNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD---- 212 (233)
Q Consensus 147 ~~~~--~-~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d---- 212 (233)
.... . ...+.+ +++.++.|+.+ ..+.+||..+.+ .+..+.........+.+ ++++++.|+.+
T Consensus 201 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 276 (308)
T 1zgk_A 201 AMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTF 276 (308)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCB
T ss_pred CCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcc
Confidence 1111 1 112222 56667776653 568888876542 22211111111112222 56777888754
Q ss_pred -CcEEEEecCCcE
Q 026765 213 -SLVSLWDISEML 224 (233)
Q Consensus 213 -g~v~iwd~~~~~ 224 (233)
..+.+||+.+.+
T Consensus 277 ~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 277 LDSVECYDPDTDT 289 (308)
T ss_dssp CCEEEEEETTTTE
T ss_pred cceEEEEcCCCCE
Confidence 357889888664
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.80 E-value=0.54 Score=36.43 Aligned_cols=95 Identities=7% Similarity=0.002 Sum_probs=45.7
Q ss_pred CCCEEEEEeCC-CCEEEEecccCCCCceeeEEEec-CcCcEEEEEEcCCCCCEEEEEeC-C---------CeEEEEECCC
Q 026765 31 TGTKLASGSVD-QTARVWHIEPHGHGKVKDIELRG-HADSVDQLCWDPKHADLIATASG-D---------KTVRLWDARS 98 (233)
Q Consensus 31 ~~~~l~s~~~D-~~v~vW~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~sg~~-d---------~~i~iwd~~~ 98 (233)
++...+.|+.+ ..+.++|+............++. .......+.+ +..+++.|+. + ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 56677777754 45666666431222221111121 1111222222 2456677765 2 4688899988
Q ss_pred Ceeeeeeeec-CCe--eEEEECCCCCeEEEEcCC
Q 026765 99 GKCSQQAELS-GEN--INITYKPDGTHIAVGNRD 129 (233)
Q Consensus 99 ~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~~~d 129 (233)
.+........ ... ..++. .+++.++.|+.+
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 7654432222 111 12222 466677777754
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.72 E-value=0.92 Score=35.08 Aligned_cols=135 Identities=10% Similarity=0.027 Sum_probs=62.0
Q ss_pred CeEEEEECCCCeeeeeeeecCC--e-eEEEECCCCCeEEEEcC------CCcEEEEEc--CCCeeeeeeec--Cce-eeE
Q 026765 89 KTVRLWDARSGKCSQQAELSGE--N-INITYKPDGTHIAVGNR------DDELTILDV--RKFKPIHRRKF--GYE-VNE 154 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~~~------d~~i~i~d~--~~~~~~~~~~~--~~~-~~~ 154 (233)
..+.+||..+.+.......... . .+++.. +++.++.|+. ...+..||+ .+.+....... ... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 4788999988775543332211 1 222222 4555566653 234667776 43332221111 111 111
Q ss_pred EEECCCCCEEEEEeCC----------------------CeEEEEecCCc--eeeeEEeeecCceeEEEECCCCCEEEEee
Q 026765 155 IAWNMTGEMFFLTTGN----------------------GTVEVLTYPSL--RPLDTVVAHTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~----------------------~~v~~~~~~~~--~~~~~~~~~~~~v~~i~~~p~~~~las~s 210 (233)
.+...+++.++.|+.+ ..+.+||..+. +.+..+......-.++ ..++++++.|+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEee
Confidence 1222356666666532 24677887543 3332222111111222 23677888888
Q ss_pred CCC------cEEEEecCCcEEE
Q 026765 211 ADS------LVSLWDISEMLCV 226 (233)
Q Consensus 211 ~dg------~v~iwd~~~~~~i 226 (233)
.++ .|.++++++.+.+
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCE
T ss_pred eCCCCCEeeeEEEEEEcCcEeE
Confidence 653 3555577766543
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.57 E-value=1.3 Score=34.60 Aligned_cols=153 Identities=9% Similarity=0.063 Sum_probs=77.3
Q ss_pred eeeCccccEEEEEECcCCC-EEEEEeCCCCEEEEecccCCCCceeeE--EEecCcCcEEEEEEcCC---CCCEEEEEeC-
Q 026765 15 EYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDI--ELRGHADSVDQLCWDPK---HADLIATASG- 87 (233)
Q Consensus 15 ~~~~H~~~V~~~~~~~~~~-~l~s~~~D~~v~vW~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~---~~~~l~sg~~- 87 (233)
.+...-..-+.++|.|+|+ ++++ ..++.|++++.+......+... ...........++++|+ ++.+.++-..
T Consensus 12 ~va~~l~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 12 VLQDKLDHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp EEEEEESSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred EEECCCCCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC
Confidence 3333344568999999999 5554 5578888887421100001000 01111235678999995 4555554332
Q ss_pred ------CCeEEEEECCCC--ee--eeee-e-ec------CCeeEEEECCCCCeEEEEcC-------------CCcEEEEE
Q 026765 88 ------DKTVRLWDARSG--KC--SQQA-E-LS------GENINITYKPDGTHIAVGNR-------------DDELTILD 136 (233)
Q Consensus 88 ------d~~i~iwd~~~~--~~--~~~~-~-~~------~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d 136 (233)
...|..|+.... .. ...+ . .. +....+.|.|||...++.+. .++|.-++
T Consensus 91 ~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 91 GDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp CSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 234555665432 11 1111 1 11 11345999999965555433 13565566
Q ss_pred cCCCe------------eeeeeecC-ceeeEEEECC-CCCEEEEEe
Q 026765 137 VRKFK------------PIHRRKFG-YEVNEIAWNM-TGEMFFLTT 168 (233)
Q Consensus 137 ~~~~~------------~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 168 (233)
....- .......+ .....++|++ +++++++-.
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 54210 01111122 2467889999 666655543
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.47 E-value=0.32 Score=37.85 Aligned_cols=109 Identities=10% Similarity=0.042 Sum_probs=66.9
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeeeeeec--CCeeEEEE--CCCCCeEEEE--cCCCcEEEEEcCCCeeeeeeecCcee-
Q 026765 80 DLIATASGDKTVRLWDARSGKCSQQAELS--GENINITY--KPDGTHIAVG--NRDDELTILDVRKFKPIHRRKFGYEV- 152 (233)
Q Consensus 80 ~~l~sg~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~--~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~- 152 (233)
.+++.++.||.|.-.|..+|+..-.+... .+.....- .+.+..++.+ ..||.+..++..++...........+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36778999999999999999876655543 12221110 0112233333 57999999998765433222221111
Q ss_pred -eEEEEC-----------CCCCEEEEEeCCCeEEEEecCCceeeeEEe
Q 026765 153 -NEIAWN-----------MTGEMFFLTTGNGTVEVLTYPSLRPLDTVV 188 (233)
Q Consensus 153 -~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 188 (233)
..+... ..+..+++++.+|.+..+|..+++.+..+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 011111 145678889999999999999998887765
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.42 E-value=1.2 Score=33.71 Aligned_cols=141 Identities=14% Similarity=0.115 Sum_probs=72.2
Q ss_pred CCEEEEEeC----C-----CeEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCC-----CcEEEEEcCCCee
Q 026765 79 ADLIATASG----D-----KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD-----DELTILDVRKFKP 142 (233)
Q Consensus 79 ~~~l~sg~~----d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 142 (233)
..+++.|+. + ..+.+||..+.+........... ..++. -+++.++.|+.+ ..+.+||+.+.+.
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 456667765 2 45788998887654332222111 12222 255666666643 3578899876554
Q ss_pred eeeeecCc--e-eeEEEECCCCCEEEEEeCC-----CeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEEeeCC
Q 026765 143 IHRRKFGY--E-VNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD 212 (233)
Q Consensus 143 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las~s~d 212 (233)
........ . ...+.+ +++.++.|+.+ ..+.+||..+.+ .+..+........++.+ ++++++.|+.+
T Consensus 150 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 225 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYD 225 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCC
Confidence 32211111 1 111222 56666666543 457788876532 22111111111122333 56777888765
Q ss_pred -----CcEEEEecCCcE
Q 026765 213 -----SLVSLWDISEML 224 (233)
Q Consensus 213 -----g~v~iwd~~~~~ 224 (233)
..+.+||+.+.+
T Consensus 226 ~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 226 GQDQLNSVERYDVETET 242 (308)
T ss_dssp SSSBCCCEEEEETTTTE
T ss_pred CCCccceEEEEeCCCCc
Confidence 458889987664
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.42 E-value=1.4 Score=34.42 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=38.8
Q ss_pred eeeEEEEC-------CCCCEEEEEeCCCeEEEEecCCc-eee--eEEe-eecCceeEEEECCCCCEEEEee
Q 026765 151 EVNEIAWN-------MTGEMFFLTTGNGTVEVLTYPSL-RPL--DTVV-AHTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 151 ~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~-~~~--~~~~-~~~~~v~~i~~~p~~~~las~s 210 (233)
....+.+. .+|++++..-..+.|..+++... +.. ..+. +....+..+++.|+|.++++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 35566663 46777777777788888887642 221 1222 2235688999999998776654
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.22 E-value=1.5 Score=34.06 Aligned_cols=190 Identities=15% Similarity=0.223 Sum_probs=108.6
Q ss_pred ECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eeeeeee
Q 026765 28 WNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQAE 106 (233)
Q Consensus 28 ~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~-~~~~~~~ 106 (233)
.+|..+.+|--. ..++.|+|++.. .+++... ....|..-.|-....--|++ +..|.-|++... .+...+.
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK--~klks~~---~~e~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFd 144 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMK--SKMKAHT---MTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFD 144 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTT--EEEEEEE---CSSCEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEE
T ss_pred eCCCccEEEEec-CCeEEEechHHh--hhhccee---cCCccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeee
Confidence 467777776665 688999999753 2222222 24577777885432222233 467999999653 2323332
Q ss_pred ec-----CCeeEEEECCCCCeEEEEcC---C----CcEEEEEcCCCeeeeeeecCceeeEEEECCCCC-----EEEEEeC
Q 026765 107 LS-----GENINITYKPDGTHIAVGNR---D----DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE-----MFFLTTG 169 (233)
Q Consensus 107 ~~-----~~~~~~~~~~~~~~l~~~~~---d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 169 (233)
.+ ..+++-..+++.++++..+- + |.+.+|..+... .+.-.++...-..+..+|+ .++.+..
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc--cceeeeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 21 23456677889998775442 2 567778765432 2222233333333333332 3333322
Q ss_pred ---CCeEEEEecCCc---e-ee-eE-Ee------eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 170 ---NGTVEVLTYPSL---R-PL-DT-VV------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 170 ---~~~v~~~~~~~~---~-~~-~~-~~------~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
.+.+++...... . +. +. .. ....-..++..|+.-..+..-+.-|.|.+||+.++.|+..
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 257888876321 1 11 10 00 0122345778888878888888999999999999999764
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.17 E-value=1.4 Score=33.57 Aligned_cols=162 Identities=10% Similarity=0.075 Sum_probs=78.5
Q ss_pred CcCCCEEEEEe-CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCC-------------CeEEEE
Q 026765 29 NCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-------------KTVRLW 94 (233)
Q Consensus 29 ~~~~~~l~s~~-~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d-------------~~i~iw 94 (233)
++++.++.-.. .|+. +||.+...+.... ++.. +.+ --+++.+..+..+...+ ..|+..
T Consensus 22 ~~~g~~iy~~n~~d~~-~ly~~~~dg~~~~---~l~~--~~~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 22 CESDGEVFFSNTNDNG-RLYAMNIDGSNIH---KLSN--DTA--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp EEETTEEEEEEGGGTT-EEEEEETTSCSCE---EEEE--EEE--EEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred EEeCCEEEEEeCCCCc-eEEEEcCCCCCCE---EccC--Cce--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 35677665543 3332 5666654333221 1211 112 23466665555555443 356667
Q ss_pred ECCCCeeeeeeeecCCeeEEEECCCCCeEEEEc--CC--CcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEeC-
Q 026765 95 DARSGKCSQQAELSGENINITYKPDGTHIAVGN--RD--DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG- 169 (233)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (233)
++..++.... .... ...+++++++|+-.. .+ ..|...++...+....... .+ ..++++++.+.-.+.
T Consensus 94 ~~dg~~~~~l--~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~--~~--~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 94 KRNGHGSTVL--DPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH--YL--FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp ETTSCCCEEE--ECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS--CC--CCSEEETTEEEEECTT
T ss_pred eCCCCcceEe--ecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC--Cc--eEeeEECCEEEEEeCC
Confidence 7766542221 1122 235677888887554 33 3455555543322211111 11 234567777776654
Q ss_pred CCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEee
Q 026765 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s 210 (233)
...|...++...... .+. ..... ..+.|++.+|+-..
T Consensus 166 ~~~Iy~~~l~g~~~~-~l~--~~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 166 NGQLYRYDTASQSEA-LFY--DCNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp TCCEEEEETTTTEEE-EEE--CSCEE-EEEEEETTEEEEEE
T ss_pred CceEEEEECCCCCEE-EEe--CCCcc-ceeeecCCEEEEEE
Confidence 667777776554332 221 12222 23557777766444
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.91 E-value=2.1 Score=34.68 Aligned_cols=111 Identities=11% Similarity=0.142 Sum_probs=59.9
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceee-EEEec------CcCcEEEEEEcCC---CCCEEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD-IELRG------HADSVDQLCWDPK---HADLIA 83 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~-~~~~~------h~~~v~~~~~~~~---~~~~l~ 83 (233)
..+..--..-+.++|.|+|.++++-...+.|++++... ..... ..+.. .......++|+|+ ++.+.+
T Consensus 20 ~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 34443345667999999999888765445677765422 12111 12211 2345678999995 555555
Q ss_pred EEeC------------CCeEEEEECCCC--ee---eeeee-e----cCCeeEEEECCCCCeEEEEc
Q 026765 84 TASG------------DKTVRLWDARSG--KC---SQQAE-L----SGENINITYKPDGTHIAVGN 127 (233)
Q Consensus 84 sg~~------------d~~i~iwd~~~~--~~---~~~~~-~----~~~~~~~~~~~~~~~l~~~~ 127 (233)
+-+. ...|.-++.... +. ...+. . .+..-.++|.|||...++.+
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 4432 124544554321 11 11111 1 12245699999998766544
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.77 E-value=1.4 Score=32.11 Aligned_cols=138 Identities=13% Similarity=0.131 Sum_probs=74.2
Q ss_pred CcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeee-----eeeec---CCeeEEEECCCCCeEEEEcCCCcEEEEEcC
Q 026765 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ-----QAELS---GENINITYKPDGTHIAVGNRDDELTILDVR 138 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (233)
..+.+++|+|++ .+.+ . .++.+.-.+..+..... ..... ..-..+.|.|+|.+.++ .|+.|.-++..
T Consensus 41 ~~~~~laf~P~G-~LYa-V-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYG-V-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTS-CEEE-E-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCc-cEEE-E-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 477899999954 4444 3 66765555543321110 11000 01246889999988877 56877666542
Q ss_pred CCe---eeee-eecC----ceeeEEEECCCCCEEEEEeCCCeEEEEecCCce-----eeeEEeeec--CceeEEEECCCC
Q 026765 139 KFK---PIHR-RKFG----YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR-----PLDTVVAHT--AGCYCIAIDPMG 203 (233)
Q Consensus 139 ~~~---~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~--~~v~~i~~~p~~ 203 (233)
+.. .+.. .+.+ ..+..+.+.|+|.+.++. ++.+.-...+... ...+..++. ..-..+.|.|++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 211 0000 0110 256889999999988888 6665433222111 011222211 123346688988
Q ss_pred CEEEEeeCCC
Q 026765 204 RYFAVGSADS 213 (233)
Q Consensus 204 ~~las~s~dg 213 (233)
.+++.. +|
T Consensus 194 ~l~~v~--~g 201 (236)
T 1tl2_A 194 TLFGVQ--GG 201 (236)
T ss_dssp CEEEEE--TT
T ss_pred cEEEEe--CC
Confidence 877766 66
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.37 Score=37.48 Aligned_cols=110 Identities=12% Similarity=0.047 Sum_probs=67.0
Q ss_pred CeEEEEcCCCcEEEEEcCCCeeeeeeecC--ceeeEEEE--CCCCCEEEEE--eCCCeEEEEecCCceeeeEEee----e
Q 026765 121 THIAVGNRDDELTILDVRKFKPIHRRKFG--YEVNEIAW--NMTGEMFFLT--TGNGTVEVLTYPSLRPLDTVVA----H 190 (233)
Q Consensus 121 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~----~ 190 (233)
..+++++.||.+.-+|..+++.....+.. .++....- .+.+..+++. ..||.+..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36778889999999998888877766554 11111100 0112234433 5799999998877644322221 1
Q ss_pred cCceeE----EEECC----CCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 191 TAGCYC----IAIDP----MGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 191 ~~~v~~----i~~~p----~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
..++.. +-..+ .+..+.+|+.+|.+.-.|+.+|+.+.+|.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 111111 00001 35678899999999999999999998875
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.65 E-value=1.7 Score=32.86 Aligned_cols=144 Identities=10% Similarity=0.089 Sum_probs=71.5
Q ss_pred CCCEEEEEeC-----C------CeEEEEECCCCeeeeeeeecCCee--EEEECCCCCeEEEEcCC--------CcEEEEE
Q 026765 78 HADLIATASG-----D------KTVRLWDARSGKCSQQAELSGENI--NITYKPDGTHIAVGNRD--------DELTILD 136 (233)
Q Consensus 78 ~~~~l~sg~~-----d------~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d--------~~i~i~d 136 (233)
+..+++.|+. . ..+.+||..+.+............ .++.. ++..++.|+.+ ..+.+||
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEEC
Confidence 3467777773 1 126788988876543222221111 12222 55566666632 3588899
Q ss_pred cCCCeeeeeeecCce-eeEEEECCCCCEEEEEeC------CCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEE
Q 026765 137 VRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTG------NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFA 207 (233)
Q Consensus 137 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~la 207 (233)
+.+.+.........+ ....+...+++.++.|+. -..+.+||..+.+ .+..+......-.++.+ ++++++
T Consensus 124 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv 201 (315)
T 4asc_A 124 RLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIV 201 (315)
T ss_dssp TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred CCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEE
Confidence 876543322111111 111112235666677665 2467888876532 22211111111112223 567777
Q ss_pred EeeCCC-----cEEEEecCCcE
Q 026765 208 VGSADS-----LVSLWDISEML 224 (233)
Q Consensus 208 s~s~dg-----~v~iwd~~~~~ 224 (233)
.|+.++ .+.+||+.+.+
T Consensus 202 ~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 202 AAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEECSSSEEEEEEEEETTTTE
T ss_pred EeccCCCCccceEEEEECCCCe
Confidence 777654 47888887653
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.38 E-value=4.7 Score=36.95 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=75.7
Q ss_pred EEEEECCCCeeeeeeeecC--CeeEEEECCCCCeEEEEcCCCcEEEEEcCCCe--eeeeeecCceeeEEEECCC------
Q 026765 91 VRLWDARSGKCSQQAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFK--PIHRRKFGYEVNEIAWNMT------ 160 (233)
Q Consensus 91 i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~------ 160 (233)
|++.+...+.....+.... .+...+.. +..++.+. ++.+.++.+...+ .........++.++++.+.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~ 570 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGL 570 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTC
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCccc
Confidence 4555554433444444332 23333433 34666554 5677777775433 2233445678899988754
Q ss_pred CCEEEEEeC-CCeEEEEecCCceeeeEEeee-cCceeEEEEC--CCCCEEEEeeCCCcEEEEecC
Q 026765 161 GEMFFLTTG-NGTVEVLTYPSLRPLDTVVAH-TAGCYCIAID--PMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 161 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-~~~v~~i~~~--p~~~~las~s~dg~v~iwd~~ 221 (233)
++++++|.. |++++++.+++.+.+....-. ...+.++.+. ....+|..|-.||.+.-+.++
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred ccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 468899986 999999999877665443321 1233344332 234578899999998666554
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.05 E-value=2.5 Score=32.86 Aligned_cols=131 Identities=13% Similarity=0.185 Sum_probs=87.0
Q ss_pred CCeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEE
Q 026765 88 DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (233)
Q Consensus 88 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (233)
+.+|.|-|+..+.......... -+.-.+|..+.+|.-. ...+.++|+++.+.+....+..++.-..|- +.+.++.-
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A--dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lV 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA--DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC--SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEEC-SSSEEEEE
T ss_pred CCEEEEEECCCCCCcccccccc--ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEec-CCCeEEEE
Confidence 3467888887765433222222 2345588888877665 678999999998888887777677776774 33444444
Q ss_pred eCCCeEEEEecC-CceeeeEEeeec----CceeEEEECCCCCEEEEeeC-------CCcEEEEecCCc
Q 026765 168 TGNGTVEVLTYP-SLRPLDTVVAHT----AGCYCIAIDPMGRYFAVGSA-------DSLVSLWDISEM 223 (233)
Q Consensus 168 ~~~~~v~~~~~~-~~~~~~~~~~~~----~~v~~i~~~p~~~~las~s~-------dg~v~iwd~~~~ 223 (233)
+ +..|+-|+.. +..|.+-+.-|. ..|..-..+++.++++..+- .|.+.+|..+..
T Consensus 124 T-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 124 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 190 (365)
T ss_dssp E-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred c-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc
Confidence 4 4578888875 346666666554 34566677899998765442 267889988765
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.79 E-value=2.8 Score=32.71 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=81.8
Q ss_pred eeeeCccccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeE-EE----ecCcCcEEEEEEcCC---CCCEEEEE
Q 026765 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-EL----RGHADSVDQLCWDPK---HADLIATA 85 (233)
Q Consensus 14 ~~~~~H~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~-~~----~~h~~~v~~~~~~~~---~~~~l~sg 85 (233)
..+..--..-+.++|.|+|.++++--..|.|++++... .....+ .+ ..-......++++|+ ++.+.++-
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCC---CcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 34444556678999999999888876688888876432 111111 11 112346788999985 34444432
Q ss_pred --eCCCeEEEEECCCC-----ee---eeeee-e----cCCeeEEEECCCCCeEEEEcC-------------CCcEEEEEc
Q 026765 86 --SGDKTVRLWDARSG-----KC---SQQAE-L----SGENINITYKPDGTHIAVGNR-------------DDELTILDV 137 (233)
Q Consensus 86 --~~d~~i~iwd~~~~-----~~---~~~~~-~----~~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~ 137 (233)
..+..|.-|....+ +. ...+. . .+....+.|.|||...++.+. .++|.-++.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 23455555655431 11 11111 1 112235999999987666442 244444444
Q ss_pred CCC----ee---eeeeecC-ceeeEEEECCCCCEEEEEe
Q 026765 138 RKF----KP---IHRRKFG-YEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 138 ~~~----~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (233)
... ++ ......+ .....++|+++|+++++-.
T Consensus 182 dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEEC
T ss_pred CCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEec
Confidence 321 00 0111112 2356789999887776654
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.87 E-value=1.5 Score=36.68 Aligned_cols=100 Identities=11% Similarity=0.064 Sum_probs=65.5
Q ss_pred EEEEEcCCCCCEEEEEeCCCeEEEEECCCC------ee-------eeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEE
Q 026765 70 DQLCWDPKHADLIATASGDKTVRLWDARSG------KC-------SQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136 (233)
Q Consensus 70 ~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~------~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 136 (233)
..+..+|++..++++|--+.++.++|++.- +. ..+.++...+.-.+|.++|.-..+-.-|..+.-|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 456788998878888888999999998631 11 22233344556789999995555666899999999
Q ss_pred cCCC----------eeeeeeecCceeeEEEE------CCCCCEEEEEeC
Q 026765 137 VRKF----------KPIHRRKFGYEVNEIAW------NMTGEMFFLTTG 169 (233)
Q Consensus 137 ~~~~----------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 169 (233)
+... ..+........+..+.- .++|+++++...
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 8542 23333444444544433 567888777653
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.28 E-value=0.37 Score=43.03 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.6
Q ss_pred ceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 193 ~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
.+.+++..++..++.+-+.|+++||||+.++.|+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45677888888999999999999999999999998864
No 337
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.17 E-value=1.6 Score=39.81 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=32.2
Q ss_pred eeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 194 CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 194 v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+.+++..++..++.+-+.|+++||||+.++.|+.++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4556667788899999999999999999999999865
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.06 E-value=6.9 Score=33.61 Aligned_cols=192 Identities=11% Similarity=0.088 Sum_probs=97.5
Q ss_pred cCCCEEEEEeCC----CCEEEEecccCCCCceeeE-E-----EecCcCcEEEEEEcCCCCCEEEEEeCCC------eEEE
Q 026765 30 CTGTKLASGSVD----QTARVWHIEPHGHGKVKDI-E-----LRGHADSVDQLCWDPKHADLIATASGDK------TVRL 93 (233)
Q Consensus 30 ~~~~~l~s~~~D----~~v~vW~~~~~~~~~~~~~-~-----~~~h~~~v~~~~~~~~~~~~l~sg~~d~------~i~i 93 (233)
.++..++.||.+ ..+.+||+... .+.... . .+.-......+.+.. ++.+++.||.++ .+.+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~--~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD--KIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS--CEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC--eEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEE
Confidence 456777888764 35666666432 221111 0 111111222233321 345777776543 4788
Q ss_pred EECCCCeeeeeeeecCC--eeEEEECCCCCeEEEEcCCC--cEEEEEcCCCeeeeeee---c--C-ceeeEEEECCC-CC
Q 026765 94 WDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRDD--ELTILDVRKFKPIHRRK---F--G-YEVNEIAWNMT-GE 162 (233)
Q Consensus 94 wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~---~--~-~~~~~~~~~~~-~~ 162 (233)
||..+.+.......... ..+++...++..++.|+.++ .+.+||+.+.+...... . . .....+.+... ++
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred EeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 99888765443222211 12234434777888887654 68899987765433221 1 1 11222444444 56
Q ss_pred EEEEEeC--C-----CeEEEEecCCcee-----eeEEeee--cCce-eEEEECCCCCEEEEeeCC--------CcEEEEe
Q 026765 163 MFFLTTG--N-----GTVEVLTYPSLRP-----LDTVVAH--TAGC-YCIAIDPMGRYFAVGSAD--------SLVSLWD 219 (233)
Q Consensus 163 ~~~~~~~--~-----~~v~~~~~~~~~~-----~~~~~~~--~~~v-~~i~~~p~~~~las~s~d--------g~v~iwd 219 (233)
.++.|+. + +.+.+||..+.+- -..+... .... .++....++++++.|+.+ ..|.+||
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 6677654 2 4678888765541 1111111 1111 122222336777888743 4588999
Q ss_pred cCCcE
Q 026765 220 ISEML 224 (233)
Q Consensus 220 ~~~~~ 224 (233)
+.+.+
T Consensus 633 ~~t~~ 637 (695)
T 2zwa_A 633 PLSET 637 (695)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 88764
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.02 E-value=5.4 Score=32.35 Aligned_cols=191 Identities=15% Similarity=0.213 Sum_probs=108.2
Q ss_pred EECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eeeeee
Q 026765 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQA 105 (233)
Q Consensus 27 ~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~-~~~~~~ 105 (233)
-.+|..+.+|--. ..++.|+|++.. .+.+... ....|..-.|-.. +.|+- =.+..|.-|++... .+...+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K--~klks~~---~~e~VvfWkWis~--~~l~l-VT~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMK--SKMKAHT---MTDDVTFWKWISL--NTVAL-VTDNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTT--EEEEEEE---CSSCCCEEEEEET--TEEEE-ECSSEEEEEESSSSCCCEEEE
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHh--hhhccee---cCCCceEEEecCC--CeEEE-EcCCeeEEecccCCCCchhhe
Confidence 3456666666655 789999999752 2222222 2345666667533 23322 24578999999643 222333
Q ss_pred ee-----cCCeeEEEECCCCCeEEEEcC-------CCcEEEEEcCCCeeeeeeecCceeeEEEECCCC-----CEEEEEe
Q 026765 106 EL-----SGENINITYKPDGTHIAVGNR-------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG-----EMFFLTT 168 (233)
Q Consensus 106 ~~-----~~~~~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 168 (233)
.. ...+++-..+++.+|++..+- .|.+.+|..+... .+.-.++......+..+| +.++.+.
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc--cchheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 22 123456677899999875442 2567778765432 122222222222332222 2333343
Q ss_pred C---CCeEEEEecCCc----eeeeE--Ee------eecCceeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEe
Q 026765 169 G---NGTVEVLTYPSL----RPLDT--VV------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (233)
Q Consensus 169 ~---~~~v~~~~~~~~----~~~~~--~~------~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~ 228 (233)
. .+.+++.+.... .++.. .. .-..-..++..|+.-..+..-+.-|.|.+||+.++.|+..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 3 378888876322 11110 00 1122345788888888888889999999999999998764
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.85 E-value=5.8 Score=34.07 Aligned_cols=146 Identities=10% Similarity=0.096 Sum_probs=77.8
Q ss_pred CCEEEEEeCC----CeEEEEECCCCeeeeee-e-----ecCC--eeEEEECC-CCCeEEEEcCCC------cEEEEEcCC
Q 026765 79 ADLIATASGD----KTVRLWDARSGKCSQQA-E-----LSGE--NINITYKP-DGTHIAVGNRDD------ELTILDVRK 139 (233)
Q Consensus 79 ~~~l~sg~~d----~~i~iwd~~~~~~~~~~-~-----~~~~--~~~~~~~~-~~~~l~~~~~d~------~i~i~d~~~ 139 (233)
..+++.||.+ ..+.+||..+.+..... . .... ..+++..+ ++..++.|+.++ .+.+||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 4677777754 45788998877654433 1 1111 11233333 666777777542 477889877
Q ss_pred CeeeeeeecCc--eeeEEEECCCCCEEEEEeCCC--eEEEEecCCce--eeeE---EeeecCceeEEEECCC-CCEEEEe
Q 026765 140 FKPIHRRKFGY--EVNEIAWNMTGEMFFLTTGNG--TVEVLTYPSLR--PLDT---VVAHTAGCYCIAIDPM-GRYFAVG 209 (233)
Q Consensus 140 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~--~~~~---~~~~~~~v~~i~~~p~-~~~las~ 209 (233)
.+......... .-..+..-.+++.++.|+.++ .+.+||..+.+ .+.. +........++.++.+ ++.++.|
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG 557 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC
T ss_pred CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC
Confidence 54332211111 111222213777888876544 68888876542 1111 0000111123555555 6677778
Q ss_pred eC--C-----CcEEEEecCCcE
Q 026765 210 SA--D-----SLVSLWDISEML 224 (233)
Q Consensus 210 s~--d-----g~v~iwd~~~~~ 224 (233)
+. + ..+.+||+.+..
T Consensus 558 G~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 558 GGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CBCTTSSCBCCEEEEEEECTTC
T ss_pred CcCCCCCeeeCcEEEEEccCCc
Confidence 76 2 358888987765
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.85 E-value=6.9 Score=31.68 Aligned_cols=100 Identities=10% Similarity=0.193 Sum_probs=55.3
Q ss_pred CcEEEEEEcCCCCCEEEEEeCC-CeEEEEECCCCeeeeeeee---------cCCeeEEEECCC---CCeEEEEcC-----
Q 026765 67 DSVDQLCWDPKHADLIATASGD-KTVRLWDARSGKCSQQAEL---------SGENINITYKPD---GTHIAVGNR----- 128 (233)
Q Consensus 67 ~~v~~~~~~~~~~~~l~sg~~d-~~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~---~~~l~~~~~----- 128 (233)
.....++|.|++ .++++ ... +.|.+++..+++......+ .+....++++|+ +.+|.+...
T Consensus 27 ~~P~~~a~~pdG-~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS-CEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC-cEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 455689999986 56655 455 4788887655543222211 122347999995 555544332
Q ss_pred --------CCcEEEEEcCCC-------eeeee-ee--cCceeeEEEECCCCCEEEEEe
Q 026765 129 --------DDELTILDVRKF-------KPIHR-RK--FGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 129 --------d~~i~i~d~~~~-------~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 168 (233)
...|.-+++... +.+.. .. ..+....+.|.++|.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 123444544221 11111 11 124567899999998777654
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.86 E-value=6.2 Score=29.80 Aligned_cols=143 Identities=12% Similarity=0.083 Sum_probs=69.3
Q ss_pred CCCEEEEEeC----CC-------eEEEEECCCCeeeeeeeecCCe--eEEEECCCCCeEEEEcCC-------CcEEEEEc
Q 026765 78 HADLIATASG----DK-------TVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD-------DELTILDV 137 (233)
Q Consensus 78 ~~~~l~sg~~----d~-------~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d-------~~i~i~d~ 137 (233)
+..+++.|+. ++ .+.+||..+.+........... ..++.. ++..++.|+.+ ..+.+||+
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeC
Confidence 3567777773 11 2778898877654332222111 122222 55566666653 24778888
Q ss_pred CCCeeeeeeecCce-eeEEEECCCCCEEEEEeC------CCeEEEEecCCce--eeeEEeeecCceeEEEECCCCCEEEE
Q 026765 138 RKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTG------NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAV 208 (233)
Q Consensus 138 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~las 208 (233)
.+.+.........+ ........+++.++.|+. ...+.+||..+.+ .+..+........++.+ ++++++.
T Consensus 135 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 212 (318)
T 2woz_A 135 VAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIA 212 (318)
T ss_dssp TTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEE
Confidence 76554332221111 111111246666666653 2458888876543 22111110111112222 5677777
Q ss_pred eeCC-----CcEEEEecCCc
Q 026765 209 GSAD-----SLVSLWDISEM 223 (233)
Q Consensus 209 ~s~d-----g~v~iwd~~~~ 223 (233)
|+.+ ..+.+||+.+.
T Consensus 213 GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 213 GGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEETTEEEEEEEEEETTTC
T ss_pred cCcCCCCccceEEEEECCCC
Confidence 7654 24678887765
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.83 E-value=9.5 Score=29.68 Aligned_cols=141 Identities=19% Similarity=0.215 Sum_probs=76.6
Q ss_pred cCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeee-------cCCeeEEEECCC---CCeEEEE---cCCCcE
Q 026765 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-------SGENINITYKPD---GTHIAVG---NRDDEL 132 (233)
Q Consensus 66 ~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~l~~~---~~d~~i 132 (233)
-..-..++|.|++ .++++--..|.|++++...++....... ......++++|+ +.+|.+. ..+..|
T Consensus 31 L~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999986 5665544489999998665543221111 233467999995 3444432 234455
Q ss_pred EEEEcCCC----------eeee-eee--cCceeeEEEECCCCCEEEEEeC-------------CCeEEEEecCCc----e
Q 026765 133 TILDVRKF----------KPIH-RRK--FGYEVNEIAWNMTGEMFFLTTG-------------NGTVEVLTYPSL----R 182 (233)
Q Consensus 133 ~i~d~~~~----------~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~----~ 182 (233)
.-|.+... +.+. ... ..+....+.|.++|.++++.+. .|.|.-++.+.. .
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 55554331 1111 111 1234556999999987766442 355555554321 0
Q ss_pred ee---eEEe-eecCceeEEEECCCCCEEEE
Q 026765 183 PL---DTVV-AHTAGCYCIAIDPMGRYFAV 208 (233)
Q Consensus 183 ~~---~~~~-~~~~~v~~i~~~p~~~~las 208 (233)
++ ..+. +|. ....++|+|+|+++++
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 10 1111 332 3467999998776654
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=85.98 E-value=1.7 Score=37.41 Aligned_cols=35 Identities=17% Similarity=0.525 Sum_probs=28.8
Q ss_pred eeEEEECCCCCEEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 194 CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 194 v~~i~~~p~~~~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
|.++.+ +..++++-+.|.++|+||++++.++.+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 46899999999999999999999998764
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.49 E-value=11 Score=28.49 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=76.7
Q ss_pred EEECcCCCEEEEEe--CCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeee
Q 026765 26 VAWNCTGTKLASGS--VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 103 (233)
Q Consensus 26 ~~~~~~~~~l~s~~--~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~ 103 (233)
..|++++++|+=.. .++.-.||.+...+... . .+..+.. ..+++.+..+..+.....+|.+-++..+....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~--~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-K--KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-E--EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-E--EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 36778888887665 46666777766443322 1 2333322 34566666666565546778888887665433
Q ss_pred eeeecCCeeEEEECCCCCeEEEEcCC--CcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEe--CCCeEEEEecC
Q 026765 104 QAELSGENINITYKPDGTHIAVGNRD--DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYP 179 (233)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~ 179 (233)
. ..+.. ...+.|++.+|+-.... ..|...++........ ....+ -.++|+++.+.... ..+.+...+++
T Consensus 182 l--~~~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L--t~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 182 F--YDCNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL--TEANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp E--ECSCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC--SCSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred E--eCCCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE--eCCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 2 22222 23456888887755433 3566666654332211 11122 23677788877653 23566666654
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.40 E-value=10 Score=35.67 Aligned_cols=130 Identities=12% Similarity=0.155 Sum_probs=79.8
Q ss_pred CeEEEEECCCCeeeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEEEe
Q 026765 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 89 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (233)
.+|.|-|+..+..+...... .-+...+|..+.++.=. ...+.|+|+++...+....+..++.-..|- +.+.+. -.
T Consensus 48 ~~vvIidl~~~~~~~rrpi~--AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWi-s~~~l~-lV 122 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPIS--ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVA-LV 122 (1630)
T ss_pred ceEEEEECCCCCCccccccc--chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEec-CCCeeE-EE
Confidence 36777777765432211111 11244578877776654 678999999887777666665566665663 233333 34
Q ss_pred CCCeEEEEecC-CceeeeEEeee----cCceeEEEECCCCCEEEEee-------CCCcEEEEecCCc
Q 026765 169 GNGTVEVLTYP-SLRPLDTVVAH----TAGCYCIAIDPMGRYFAVGS-------ADSLVSLWDISEM 223 (233)
Q Consensus 169 ~~~~v~~~~~~-~~~~~~~~~~~----~~~v~~i~~~p~~~~las~s-------~dg~v~iwd~~~~ 223 (233)
.+..|.-|+.. +..|.+.+.-| ...|..-..+++.++++..+ -.|.+.+|..+.+
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 45578889875 34555555444 34566667788888876433 3477888887754
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.30 E-value=19 Score=29.29 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=57.2
Q ss_pred CCeeEEEECCCCC-eEEEEcCCCcEEEEEcCCC---eeeeeee--c--------CceeeEEEECCC----CCEEEEEeCC
Q 026765 109 GENINITYKPDGT-HIAVGNRDDELTILDVRKF---KPIHRRK--F--------GYEVNEIAWNMT----GEMFFLTTGN 170 (233)
Q Consensus 109 ~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---~~~~~~~--~--------~~~~~~~~~~~~----~~~~~~~~~~ 170 (233)
...+.++|.|++. .++++...|.|++++.... ..+..+. . ......++++|+ +.++++-+..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467899999996 5666777899999975321 1111111 0 124567899986 4444443321
Q ss_pred ------------CeEEEEecCC----------ceeeeEEee--ecCceeEEEECCCCCEEEEeeCC
Q 026765 171 ------------GTVEVLTYPS----------LRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSAD 212 (233)
Q Consensus 171 ------------~~v~~~~~~~----------~~~~~~~~~--~~~~v~~i~~~p~~~~las~s~d 212 (233)
..|.-|.+.. .+.+..+.. .......|+|.|||.++++-+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1333344421 122333221 11234689999999876665543
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=76.59 E-value=24 Score=27.24 Aligned_cols=50 Identities=10% Similarity=0.169 Sum_probs=33.1
Q ss_pred CCCEEEEEeCCCeEEEEecCCceeeeE--Ee-eecCceeEEEECCCCCEEEEe
Q 026765 160 TGEMFFLTTGNGTVEVLTYPSLRPLDT--VV-AHTAGCYCIAIDPMGRYFAVG 209 (233)
Q Consensus 160 ~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~-~~~~~v~~i~~~p~~~~las~ 209 (233)
+++++++.-..+.|..+++...+.... +. .....+..+++.|+|.++++.
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 466777777788888888765443322 21 223468899999999866643
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=71.73 E-value=48 Score=28.49 Aligned_cols=189 Identities=13% Similarity=0.062 Sum_probs=100.1
Q ss_pred cccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q 026765 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (233)
Q Consensus 20 ~~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~ 99 (233)
...|+++.-..+|.+ -.|..+| +..+|..... ... ........|.++... + +.+. .|..+ -+..+|..++
T Consensus 62 ~~~i~~i~~d~~g~l-WigT~~G-l~~yd~~~~~---f~~-~~~~~~~~i~~i~~~-~-g~lW-igt~~-Gl~~~~~~~~ 131 (758)
T 3ott_A 62 NTRIYCGVIIDNTYL-YMGTDNG-ILVYNYRADR---YEQ-PETDFPTDVRTMALQ-G-DTLW-LGALN-GLYTYQLQSR 131 (758)
T ss_dssp SSCEEEEEEETTTEE-EEEETTE-EEEEETTTTE---ECC-CSCCCCSCEEEEEEE-T-TEEE-EEETT-EEEEEETTTC
T ss_pred CceEEEEEEcCCCcE-EEEeCCC-eEEEeCCCCE---EEC-cccCCCceEEEEEec-C-CcEE-EEcCC-cceeEeCCCC
Confidence 356888877666643 3344444 6677764321 111 001112346666542 3 3444 45555 5778888765
Q ss_pred eeeeeee----e-cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCCeeeeee-ec-----CceeeEEEECCCCCEEEEEe
Q 026765 100 KCSQQAE----L-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KF-----GYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 100 ~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~ 168 (233)
+...... . ...+.++....++...+ ++.+ .+..++..+.+..... .. ...+.++....+++.+.+++
T Consensus 132 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 132 KLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp CEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE
T ss_pred eEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE
Confidence 5432201 1 12344566666766544 4444 5777887654322111 10 12366777777777666666
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
. +-+..++..+.+...........|.++...++|.+.+ |+.+ -+.++|..+.
T Consensus 210 ~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 210 E-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTT 261 (758)
T ss_dssp E-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTS
T ss_pred C-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCC
Confidence 4 3577777665433211111234588888888877655 3444 4778887654
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.97 E-value=34 Score=28.73 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=39.4
Q ss_pred eeEEEECCCCCEEEEEeCC------------CeEEEEecCCceeeeEEee-ecCceeEEEECCCCCEEEEee
Q 026765 152 VNEIAWNMTGEMFFLTTGN------------GTVEVLTYPSLRPLDTVVA-HTAGCYCIAIDPMGRYFAVGS 210 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~las~s 210 (233)
...+.+.++|.+++..... ..+..++..+++....+.+ ....++.++|+||++.|..+-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5678999999888865432 2455556555655443332 235689999999999876654
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.35 E-value=12 Score=33.54 Aligned_cols=38 Identities=13% Similarity=0.295 Sum_probs=29.7
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeee
Q 026765 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE 106 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~ 106 (233)
.+.+++..++ ..++++-+.|+++|+|++.++++.....
T Consensus 237 ~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4566666654 4678899999999999999998876644
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=69.03 E-value=81 Score=30.04 Aligned_cols=47 Identities=11% Similarity=0.086 Sum_probs=32.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEecCCceeeeEEeeecCceeEEEEC
Q 026765 154 EIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID 200 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~ 200 (233)
.+..++....+..-+.-|.++++|..++..+..-.--...|+..+.+
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 45566777788899999999999999887665433334444444433
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.77 E-value=39 Score=25.92 Aligned_cols=144 Identities=8% Similarity=-0.002 Sum_probs=79.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCee-----ee--eeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcC--CCeee------
Q 026765 79 ADLIATASGDKTVRLWDARSGKC-----SQ--QAELSGENINITYKPDGTHIAVGNRDDELTILDVR--KFKPI------ 143 (233)
Q Consensus 79 ~~~l~sg~~d~~i~iwd~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~------ 143 (233)
...++.++.+|.++--.+..-.. .. .+.-......+........++..+..|.+..+... .....
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~G 188 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSG 188 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBC
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCC
Confidence 45778899999999887643211 11 11112334444444455678888888887777655 22111
Q ss_pred ---eeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCceee-------e--EEeeecCceeEEEECCCCCEEEEeeC
Q 026765 144 ---HRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPL-------D--TVVAHTAGCYCIAIDPMGRYFAVGSA 211 (233)
Q Consensus 144 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~--~~~~~~~~v~~i~~~p~~~~las~s~ 211 (233)
..+..+..+..+..-..+..++..+.+|.++...+...... . .+......+..+........++..+.
T Consensus 189 v~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~ 268 (327)
T 3uc1_A 189 VQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTS 268 (327)
T ss_dssp EESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEG
T ss_pred eeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcC
Confidence 11122234555544455678999999999988876433221 1 11111223444333334456666777
Q ss_pred CCcEEEEecCC
Q 026765 212 DSLVSLWDISE 222 (233)
Q Consensus 212 dg~v~iwd~~~ 222 (233)
+|.+.-++..+
T Consensus 269 ~G~~ir~~~~~ 279 (327)
T 3uc1_A 269 GGGVIRTAARQ 279 (327)
T ss_dssp GGCEEEEEGGG
T ss_pred CCeEEEEehhh
Confidence 77777776554
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.43 E-value=16 Score=31.51 Aligned_cols=37 Identities=11% Similarity=0.238 Sum_probs=28.7
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeee
Q 026765 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL 107 (233)
Q Consensus 68 ~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~ 107 (233)
.|.++.+. ..++++-+.|+.+|+||+.++++......
T Consensus 223 ~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45555553 35888999999999999999998776554
No 355
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=64.41 E-value=42 Score=25.00 Aligned_cols=156 Identities=9% Similarity=0.030 Sum_probs=86.0
Q ss_pred cCcEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCe------eeeeeeecCCeeEEEECCCCCeEEEEcCCCcEEEEEcC
Q 026765 66 ADSVDQLCWDPK-HADLIATASGDKTVRLWDARSGK------CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVR 138 (233)
Q Consensus 66 ~~~v~~~~~~~~-~~~~l~sg~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (233)
...|..+.- ++ ....++.++.+|.++-..+..-. ....+........+....+...++..+..|.+..++..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 345555533 32 23567789999999988764421 11111112334445555556678888888988777653
Q ss_pred CCe---------eeeeeecCceeeEEEECCCCCEEEEEeCCCeEEEEecCCcee-------eeEEeeecCceeEEEECCC
Q 026765 139 KFK---------PIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP-------LDTVVAHTAGCYCIAIDPM 202 (233)
Q Consensus 139 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~v~~i~~~p~ 202 (233)
... ....+..+..+..+....++..++..+.+|..+...+..... +..+ ...+.+..+..-..
T Consensus 146 eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~ 224 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE 224 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS
T ss_pred hCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC
Confidence 211 111122233344444344567888999999998887643221 1222 12333444333233
Q ss_pred CCEEEEeeCCCcEEE--EecCCc
Q 026765 203 GRYFAVGSADSLVSL--WDISEM 223 (233)
Q Consensus 203 ~~~las~s~dg~v~i--wd~~~~ 223 (233)
+..++..+.+|.+.. ++..+.
T Consensus 225 ~~~i~~~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 225 EVELLITTKNGKAFYDKINQKDI 247 (276)
T ss_dssp EEEEEEEETTSCEEEEEEEGGGS
T ss_pred CCEEEEEcCCCeEEEeeeCHHHC
Confidence 446667777888777 776543
No 356
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=64.23 E-value=58 Score=26.57 Aligned_cols=175 Identities=15% Similarity=0.131 Sum_probs=91.8
Q ss_pred CCCEEEEecccCCCCceeeEEEecCc----CcEEEEEEcCCCCCEEEEEe------CCCeEEEEECCCCeeeeeeeecCC
Q 026765 41 DQTARVWHIEPHGHGKVKDIELRGHA----DSVDQLCWDPKHADLIATAS------GDKTVRLWDARSGKCSQQAELSGE 110 (233)
Q Consensus 41 D~~v~vW~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~sg~------~d~~i~iwd~~~~~~~~~~~~~~~ 110 (233)
+..|.-|+++.... ..+ .+..|. ..|..-..+++..-+++.|- -.|.+.+|..+.+.. +.++ +.
T Consensus 124 ~taVyHWsi~~~s~-P~k--vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ie--Gh 197 (494)
T 1bpo_A 124 DNAVYHWSMEGESQ-PVK--MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIE--GH 197 (494)
T ss_dssp SSEEEEEESSSSCC-CEE--EEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEEC--CS
T ss_pred CCeeEEecccCCCC-chh--heecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chhe--ee
Confidence 56788888864221 111 222332 24555555665443444442 236778998866432 2222 22
Q ss_pred eeEE-EECCCC----C-eEEEEcC---CCcEEEEEcCCC---ee-e----eeeecC-----ceeeEEEECCCCCEEEEEe
Q 026765 111 NINI-TYKPDG----T-HIAVGNR---DDELTILDVRKF---KP-I----HRRKFG-----YEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 111 ~~~~-~~~~~~----~-~l~~~~~---d~~i~i~d~~~~---~~-~----~~~~~~-----~~~~~~~~~~~~~~~~~~~ 168 (233)
..+. .+..+| . .++-+.. .+++++.++... .+ . ...... .-.-.+..++....+..-+
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT 277 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 277 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe
Confidence 2211 111121 1 2222222 268999988532 11 1 111111 1123566677788899999
Q ss_pred CCCeEEEEecCCceeeeEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecC
Q 026765 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (233)
Q Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~ 221 (233)
.-|.+++||+.++..+..-.--.+.|..-+.+....-++.-...|.|.--.++
T Consensus 278 K~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 278 KYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred cCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 99999999999988876655555566655554444444444455555444333
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.41 E-value=11 Score=34.36 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=28.3
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeeee
Q 026765 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL 107 (233)
Q Consensus 69 v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~~ 107 (233)
+.+++..++ ..++++-+.|+++||||+.++++..+...
T Consensus 240 ~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 334444443 46888999999999999999988776543
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.78 E-value=60 Score=27.36 Aligned_cols=58 Identities=16% Similarity=0.248 Sum_probs=38.5
Q ss_pred eeEEEECCCCCEEEEEeCC------------CeEEEEecCCceeeeEEeee-cCceeEEEECCCCCEEEEe
Q 026765 152 VNEIAWNMTGEMFFLTTGN------------GTVEVLTYPSLRPLDTVVAH-TAGCYCIAIDPMGRYFAVG 209 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~las~ 209 (233)
.--+.|++.|++++.-..+ ..+.+.+..+++...-+.+. ...+..+.|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3458899999988877643 23444454555554444443 4578899999999887654
No 359
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=56.85 E-value=50 Score=23.47 Aligned_cols=96 Identities=8% Similarity=-0.059 Sum_probs=54.4
Q ss_pred CCcEEEEEcCCCeeeeeeecCceeeEEEECCCCCEEEE-EeCCCeEEEEecCCceeeeEEeeecCceeEEEECCC---CC
Q 026765 129 DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFL-TTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM---GR 204 (233)
Q Consensus 129 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~i~~~p~---~~ 204 (233)
...+.+|.+.....+..+..- .+..|...-...+. ...+|.+++-+..++.++... ..++.....+.. ..
T Consensus 68 g~~lt~Wa~~~~nw~wgY~~~---ds~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay---~nGvv~~~C~~s~~~Q~ 141 (206)
T 1sr4_A 68 GALLTVWALAKRNWLWAYPNI---YSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAY---GNGLIHDICSLDKLAQE 141 (206)
T ss_dssp SEEEEECSCSTTCBEEEEEGG---GCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEE---TTEEEEECCCTTCGGGC
T ss_pred CCEEEEEecCCCcceeeeccc---ccCCcCCcceeEEEeecCCCEEEEEECCCCceeeec---cCCeEEecCCCCCcccE
Confidence 345788988776665544321 01111111122233 356788888888887776543 223432223322 12
Q ss_pred EEEEeeCCCcEEEEecCCcEEEEeee
Q 026765 205 YFAVGSADSLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 205 ~las~s~dg~v~iwd~~~~~~i~~~~ 230 (233)
+=+.-...|.|.|=++.+++|+.++.
T Consensus 142 wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 142 FELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp EEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred EEEecCCCccEEEEECCCCccCCccC
Confidence 33444557888999999999999854
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.14 E-value=90 Score=26.29 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=36.8
Q ss_pred eEEEECCCCCeEEEEcCC------------CcEEEEEcCCCeeee--eeecCceeeEEEECCCCCEEEEEe
Q 026765 112 INITYKPDGTHIAVGNRD------------DELTILDVRKFKPIH--RRKFGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 112 ~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 168 (233)
-++.|+|.|+.+++...+ ..+.+.+..+.+... ....+.+++.+.|+|+++.+++..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 358999999866654332 134445544443322 223467899999999999887764
No 361
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=48.80 E-value=1.1e+02 Score=25.06 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=40.8
Q ss_pred cEEEEEECcC----CC--EEEEEeCCCCEEEEecccCCC----C--ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 22 KVHSVAWNCT----GT--KLASGSVDQTARVWHIEPHGH----G--KVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 22 ~V~~~~~~~~----~~--~l~s~~~D~~v~vW~~~~~~~----~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
..++|+...- +. .+.-|..||.|+---+..... . .+..+.+.....+|..+.+++.. ..|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTT-TEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCC-CEEEEEECCe
Confidence 5677766532 43 477788899884433322111 1 12222332345788999999875 5666777777
Q ss_pred eEEE
Q 026765 90 TVRL 93 (233)
Q Consensus 90 ~i~i 93 (233)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=42.28 E-value=1.4e+02 Score=24.21 Aligned_cols=103 Identities=6% Similarity=0.071 Sum_probs=54.8
Q ss_pred CcEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeeeee-ee-----e-------cCCeeEEEECCC----CCeEEEEcC
Q 026765 67 DSVDQLCWDPKHA-DLIATASGDKTVRLWDARSGKCSQQ-AE-----L-------SGENINITYKPD----GTHIAVGNR 128 (233)
Q Consensus 67 ~~v~~~~~~~~~~-~~l~sg~~d~~i~iwd~~~~~~~~~-~~-----~-------~~~~~~~~~~~~----~~~l~~~~~ 128 (233)
..-..|+|.|++. +++ .+...|.|++++......... .. . ......++++|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~-V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLF-ILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEE-EEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEE-EEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3456789999875 455 457889999997542211000 00 0 123456899986 333333221
Q ss_pred --C----------CcEEEEEcCC----------Ceeeeeee---cCceeeEEEECCCCCEEEEEeCC
Q 026765 129 --D----------DELTILDVRK----------FKPIHRRK---FGYEVNEIAWNMTGEMFFLTTGN 170 (233)
Q Consensus 129 --d----------~~i~i~d~~~----------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 170 (233)
+ ..|.-|.+.. .+.+.... ..+....+.|.|||.++++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1233344421 12222221 12446789999999877766543
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=39.11 E-value=1.7e+02 Score=24.59 Aligned_cols=56 Identities=13% Similarity=0.205 Sum_probs=36.5
Q ss_pred EEEECCCCCeEEEEcC------------CCcEEEEEcCCCeeeeee--ecCceeeEEEECCCCCEEEEEe
Q 026765 113 NITYKPDGTHIAVGNR------------DDELTILDVRKFKPIHRR--KFGYEVNEIAWNMTGEMFFLTT 168 (233)
Q Consensus 113 ~~~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (233)
.+.|+++|...++... ...+..++..+.+..... ....+++.++|+||++.+.+..
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5889999987763322 114555565544433322 2346789999999999888775
No 364
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=37.41 E-value=2e+02 Score=24.70 Aligned_cols=71 Identities=10% Similarity=0.118 Sum_probs=40.1
Q ss_pred cEEEEEEC----cCC--CEEEEEeCCCCEE-EEecccCCCC-----ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCC
Q 026765 22 KVHSVAWN----CTG--TKLASGSVDQTAR-VWHIEPHGHG-----KVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (233)
Q Consensus 22 ~V~~~~~~----~~~--~~l~s~~~D~~v~-vW~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~ 89 (233)
..+.|+.+ +++ ..++-|..||.|+ +-........ .+..++......+|..|.+++.. ..|+.++.++
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~-~~LYV~t~~~ 491 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAG 491 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTT-TEEEEEBSSC
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCC-CEEEEEECCE
Confidence 45555553 344 3577888899883 4322111110 11222333456789999999875 4666777777
Q ss_pred eEEE
Q 026765 90 TVRL 93 (233)
Q Consensus 90 ~i~i 93 (233)
.++|
T Consensus 492 V~kV 495 (667)
T 4gz8_A 492 VAQL 495 (667)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 365
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.01 E-value=2.1e+02 Score=24.52 Aligned_cols=194 Identities=11% Similarity=0.083 Sum_probs=103.1
Q ss_pred ccEEEEEECcCCCEEEEEeCCCCEEEEecccCCCCceeeEEEe-----cCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEE
Q 026765 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (233)
Q Consensus 21 ~~V~~~~~~~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd 95 (233)
..|.++.-..+|.+-+.. .+| +..++............... -....|.++.-..++ .+.+ |. ++-+..||
T Consensus 324 ~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWi-gt-~~GL~~~~ 398 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQ-QLWI-AT-DGSINRYD 398 (758)
T ss_dssp CBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTS-CEEE-EE-TTEEEEEE
T ss_pred ceEEEEEEcCCCCEEEee-CCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCC-CEEE-Ee-CCcHhhcC
Confidence 457888777777654433 344 44444322111111111000 012357888776654 4443 44 45688899
Q ss_pred CCCCeeeeeeee-------cCCeeEEEECCCCCeEEEEcCCCcEEEEEcCCC-----eeee---eee-----cCceeeEE
Q 026765 96 ARSGKCSQQAEL-------SGENINITYKPDGTHIAVGNRDDELTILDVRKF-----KPIH---RRK-----FGYEVNEI 155 (233)
Q Consensus 96 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~---~~~-----~~~~~~~~ 155 (233)
..+++....... ...+.++...+++ .|.+|+..+.+..+|..+. .... ... ....+.++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 477 (758)
T 3ott_A 399 YATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQI 477 (758)
T ss_dssp TTTTEEEEEEEECCC--CBSSSEEEEEECTTS-EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEE
T ss_pred cCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeE
Confidence 887765432211 1123455555555 4566777667888885421 1110 111 11247778
Q ss_pred EECCCCCEEEEEeCCCeEEEEecCCceeeeEEee----ecCceeEEEECCCCCEEEEeeCCCcEEEEecCCc
Q 026765 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~~ 223 (233)
....+|+..+.++..+-+..++..+.+.. .+.. ....+.++..+.+|++.+. +.+| +..||..+.
T Consensus 478 ~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~ 546 (758)
T 3ott_A 478 IPDNEGNVWVLLYNNKGIDKINPRTREVT-KLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDE 546 (758)
T ss_dssp EECTTSCEEEEETTCSSEEEEETTTTEEE-EECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--C
T ss_pred EEcCCCCEEEEccCCCCcEEEeCCCCceE-EecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCC
Confidence 88888887764444445777787654432 2211 1235778888888876654 4444 777876544
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.85 E-value=2.4e+02 Score=24.58 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=35.7
Q ss_pred cCcEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeeeeeee-e------cCCeeEEEECCC-CCeEEEEc
Q 026765 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE-L------SGENINITYKPD-GTHIAVGN 127 (233)
Q Consensus 66 ~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~~~~~~~~~~~-~------~~~~~~~~~~~~-~~~l~~~~ 127 (233)
...|.+++++|.++..++.+...+.|...+=.......... . ...+..++++|. ...+.++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 45799999999877777778777766554422222222111 1 123566888874 33444443
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=33.73 E-value=1.6e+02 Score=22.65 Aligned_cols=74 Identities=9% Similarity=0.019 Sum_probs=34.5
Q ss_pred cccEEEEEECc--CCCEEEEEeCCC--CEEEEecccCCCCceeeEE---Eec--------CcCcEEEEEEcCCC-CCEEE
Q 026765 20 KKKVHSVAWNC--TGTKLASGSVDQ--TARVWHIEPHGHGKVKDIE---LRG--------HADSVDQLCWDPKH-ADLIA 83 (233)
Q Consensus 20 ~~~V~~~~~~~--~~~~l~s~~~D~--~v~vW~~~~~~~~~~~~~~---~~~--------h~~~v~~~~~~~~~-~~~l~ 83 (233)
...|.+|+++| .+...+.+ ..+ --.||.............. +.. ....|.++++.|.+ ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35699999998 44444443 333 1134443322221111000 111 11257788888743 34455
Q ss_pred EEeCCCeEEEE
Q 026765 84 TASGDKTVRLW 94 (233)
Q Consensus 84 sg~~d~~i~iw 94 (233)
.+...+.|...
T Consensus 133 ~g~~~ggl~~S 143 (394)
T 3b7f_A 133 AGTSPQGLFRS 143 (394)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 55555544443
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=33.60 E-value=1.6e+02 Score=22.45 Aligned_cols=191 Identities=9% Similarity=0.033 Sum_probs=95.8
Q ss_pred cCCCEEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEE---EECCCCe------
Q 026765 30 CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL---WDARSGK------ 100 (233)
Q Consensus 30 ~~~~~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~i---wd~~~~~------ 100 (233)
|+...+++.+.+|.||-=.+............++.. +.+..+........ |+..+..|.+.- ++++...
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~-ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDV-LLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSE-EEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCE-EEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 556778889999999876553210000011122222 33333222222223 344566776543 4443322
Q ss_pred eeee-eee--cCCeeEE-EECC--CCCeEEEEcCCCcEEEEEcCCCeee------e--eeecCceeeEEEECCCCCEEEE
Q 026765 101 CSQQ-AEL--SGENINI-TYKP--DGTHIAVGNRDDELTILDVRKFKPI------H--RRKFGYEVNEIAWNMTGEMFFL 166 (233)
Q Consensus 101 ~~~~-~~~--~~~~~~~-~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~ 166 (233)
.... +.+ ...+..+ ...+ ++.+++..+.+|.++-..+...... . ....+..+-.+......+.++.
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 1101 111 1223333 3332 2567888999999988876432221 1 1122223333333345567888
Q ss_pred EeCCCeEEEEecCCceeeeE-------Ee-eecCceeEEEECCCCC-EEEEeeCCCcEEEEecCC
Q 026765 167 TTGNGTVEVLTYPSLRPLDT-------VV-AHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISE 222 (233)
Q Consensus 167 ~~~~~~v~~~~~~~~~~~~~-------~~-~~~~~v~~i~~~p~~~-~las~s~dg~v~iwd~~~ 222 (233)
.+.+|.+..+....-.+... +. .....|.++..-+.+. .|.+.+..|..+.-++.+
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 88999888887643222111 11 1223455554333344 788888888887777654
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=33.54 E-value=1.5e+02 Score=22.31 Aligned_cols=190 Identities=10% Similarity=0.050 Sum_probs=99.5
Q ss_pred cCCCEEEEEeCCCCEEEEecccCCCC-----ceeeEEEecCcCcEEEEEEcCCCCCEEEEEeCCCeEEEEEC---CCCee
Q 026765 30 CTGTKLASGSVDQTARVWHIEPHGHG-----KVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA---RSGKC 101 (233)
Q Consensus 30 ~~~~~l~s~~~D~~v~vW~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg~~d~~i~iwd~---~~~~~ 101 (233)
++...+++.+.+|.||--.+...... ....+.++.. +.+..+...... ..++..+..|.+.-... +....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~-~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTH-DYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCC-CEEEEEECCCeEEEEEHHHCCCCCc
Confidence 46677899999999998766432111 1111223322 333333222222 34455677887665543 32211
Q ss_pred ee-------e--eeecCCeeEEEECC---CCCeEEEEcCCCcEEEEEcCCCee-------eeeeecCceeeEEEECCCCC
Q 026765 102 SQ-------Q--AELSGENINITYKP---DGTHIAVGNRDDELTILDVRKFKP-------IHRRKFGYEVNEIAWNMTGE 162 (233)
Q Consensus 102 ~~-------~--~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 162 (233)
.. . +.....+..+...+ +..+++..+..|.++-..+..... ......+..+-.+......+
T Consensus 84 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 84 ASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred cCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 00 0 11112233332222 456788889999888877643221 11122233343444434456
Q ss_pred EEEEEeCCCeEEEEecCCceee---------eEEeeecCceeEEEECCCCCEEEEeeCCCcEEEEecCC
Q 026765 163 MFFLTTGNGTVEVLTYPSLRPL---------DTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~~~~~---------~~~~~~~~~v~~i~~~p~~~~las~s~dg~v~iwd~~~ 222 (233)
.+++.+.+|....+........ ..+. ....|..+..-.++..+++.+..|..+..++.+
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 7888999999888876432111 1122 234455555544566788889999988888764
No 370
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=30.80 E-value=65 Score=22.46 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=19.9
Q ss_pred eEEEECCCCC-EEEEeeCCCcEEEEecCCcEE
Q 026765 195 YCIAIDPMGR-YFAVGSADSLVSLWDISEMLC 225 (233)
Q Consensus 195 ~~i~~~p~~~-~las~s~dg~v~iwd~~~~~~ 225 (233)
.++.|...+. -+++...++++++||.+-||-
T Consensus 122 lsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 122 LSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp EEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred EEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 3444443332 255556789999999998863
No 371
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=29.26 E-value=1.9e+02 Score=23.71 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=35.1
Q ss_pred EEEEeCCCeEEEEecC-Cc-----e--eeeEEee--ecCceeEEEECCCCCEEEEeeCCCcEEE
Q 026765 164 FFLTTGNGTVEVLTYP-SL-----R--PLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSL 217 (233)
Q Consensus 164 ~~~~~~~~~v~~~~~~-~~-----~--~~~~~~~--~~~~v~~i~~~p~~~~las~s~dg~v~i 217 (233)
+.+|+.+|.+.=.-.. .. + .+..+.. ...+|..+.++++..+|..++.++.++|
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 5677888876544322 11 1 2222322 3568899999999999999999887765
No 372
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.85 E-value=2.8e+02 Score=22.96 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=41.3
Q ss_pred ccEEEEEECcCCC--EEEEEeCCCCEEEEecccCCCC--ceeeEEEecCcCcEE-EEEEcCCCCCEEEEEeCCCeEEE
Q 026765 21 KKVHSVAWNCTGT--KLASGSVDQTARVWHIEPHGHG--KVKDIELRGHADSVD-QLCWDPKHADLIATASGDKTVRL 93 (233)
Q Consensus 21 ~~V~~~~~~~~~~--~l~s~~~D~~v~vW~~~~~~~~--~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sg~~d~~i~i 93 (233)
...++|+....+. .++-|..||.|.-..+...... .+..+++.....+|. .+.++++. ..|+.++.++.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~-~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQ-LYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTS-SEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCC-CeEEEEecccccee
Confidence 3567777665443 5777888998855455432211 122233333345774 88888864 45666666655544
No 373
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=22.23 E-value=3.7e+02 Score=22.98 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=40.5
Q ss_pred cEEEEEEC----cCCC---EEEEEeCCCCEEEEecccCCCCceeeEEEecCcCcEEEEEEcCCC-CCEEEEEeCCCeEEE
Q 026765 22 KVHSVAWN----CTGT---KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKTVRL 93 (233)
Q Consensus 22 ~V~~~~~~----~~~~---~l~s~~~D~~v~vW~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sg~~d~~i~i 93 (233)
..++|+.+ .+++ .++-|..||.|.-.-........+..+.......+|..+.+++.. ...|+.++.++.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 46777753 3443 678888899874432221111112222233345688889998764 256667777665555
No 374
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.70 E-value=68 Score=19.66 Aligned_cols=18 Identities=17% Similarity=0.167 Sum_probs=15.2
Q ss_pred CcEEEEecCCcEEEEeee
Q 026765 213 SLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 213 g~v~iwd~~~~~~i~~~~ 230 (233)
-.|.|||++.|+...||.
T Consensus 17 E~V~IvNvnNG~RfeTYv 34 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYV 34 (97)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 468999999999988873
No 375
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=20.91 E-value=73 Score=19.50 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=15.1
Q ss_pred CcEEEEecCCcEEEEeee
Q 026765 213 SLVSLWDISEMLCVRTFT 230 (233)
Q Consensus 213 g~v~iwd~~~~~~i~~~~ 230 (233)
-.|.|||++.|+...||.
T Consensus 18 E~V~IvNvnNG~Rf~TYv 35 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYA 35 (96)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 468999999999888873
No 376
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.28 E-value=3.3e+02 Score=22.92 Aligned_cols=56 Identities=20% Similarity=0.263 Sum_probs=35.6
Q ss_pred EEEEEeCCCeEEEEecCC-c----e-eeeEEe--eecCceeEEEECCCCCEEEEeeCCCcEEEE
Q 026765 163 MFFLTTGNGTVEVLTYPS-L----R-PLDTVV--AHTAGCYCIAIDPMGRYFAVGSADSLVSLW 218 (233)
Q Consensus 163 ~~~~~~~~~~v~~~~~~~-~----~-~~~~~~--~~~~~v~~i~~~p~~~~las~s~dg~v~iw 218 (233)
.+.+|+.+|.+.=.-... . . .+..+. ....+|..+.++++..+|..++.++.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 456778888776433221 1 1 111122 235678899999999999999888877663
Done!