BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026767
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SPE5|SNAG_ARATH Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana
GN=GSNAP PE=2 SV=1
Length = 291
Score = 360 bits (925), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 173/233 (74%), Positives = 205/233 (87%), Gaps = 4/233 (1%)
Query: 1 MLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE 60
M +SPWDAAKHMESAAALA++L W EVADFYRKASELY ECGR+QPASDAL KAARALE
Sbjct: 63 MQASPWDAAKHMESAAALAQKLSIWNEVADFYRKASELYVECGRAQPASDALGKAARALE 122
Query: 61 DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK 120
D P+DAIQLYTDAC +LEED ++QMAFDLYRA NVYIKLEK+ DAATF LR G+AADK
Sbjct: 123 DVKPDDAIQLYTDACEILEEDGRDQMAFDLYRACANVYIKLEKFTDAATFFLRLGVAADK 182
Query: 121 CNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGD 180
C+ATNSQCKAYLSAII+YLYA+D +QAEKCYNDCSQ+DAFL+SDQ+R A++L++AY EGD
Sbjct: 183 CDATNSQCKAYLSAIILYLYAHDLQQAEKCYNDCSQIDAFLKSDQSRSASRLLTAYNEGD 242
Query: 181 VEEIKRVAQSSAISNLDHVIIKLARKLPTGDVSALKKANAVQDEEPLDENDLT 233
+EEIK+VA +S +SNLDH+IIKLARKLPTGDV+A++ + + LDE+DLT
Sbjct: 243 IEEIKKVASASTVSNLDHMIIKLARKLPTGDVTAIQ----MNTNDDLDEDDLT 291
>sp|Q9U9R7|SNAG_DICDI Gamma-soluble NSF attachment protein OS=Dictyostelium discoideum
GN=snpC PE=1 SV=1
Length = 324
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%)
Query: 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDA 67
AAK ME+A+A+AKEL +E A+ ++ +LY G S A+D + KAA+ LED
Sbjct: 78 AAKSMENASAMAKELKETQECANLLLESCKLYRTNGNSFQAADTMTKAAKLLEDIDLNQT 137
Query: 68 IQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQ 127
I+L TDAC + E DDK+ + D ++ ++ +K +KY +A ++ K +
Sbjct: 138 IKLLTDACELFELDDKDHFSGDTFKQTISMLLKHKKYTEAVDLMILQNRVFVKLEQNHDL 197
Query: 128 CKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRV 187
K+ LS I + L +D ++K Y +F+ S + A +LI+A+ DV+ +K++
Sbjct: 198 HKSCLSVITISLATDDIVASKKYYEQFLDYPSFIHSQEGTTAQELITAFDNHDVDGVKKI 257
Query: 188 AQSSAISNLDHVIIKLARKL 207
+ LD+ + K+A+ L
Sbjct: 258 VSRHIFNFLDNQVAKIAKNL 277
>sp|P81127|SNAG_BOVIN Gamma-soluble NSF attachment protein OS=Bos taurus GN=NAPG PE=1
SV=3
Length = 312
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPE 65
+ AAK E A + KE+ E KAS +Y E G A+ AL +A + +E+ PE
Sbjct: 72 FHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPE 131
Query: 66 DAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125
A+QLY + E +++ + A +L A+ + ++ ++ +AA + + +
Sbjct: 132 KAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAAISIQKEKNIYKEIENYP 191
Query: 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIK 185
+ K ++ ++V+L+ ND+ AE+C + + F S+ +L+ Y + D +++
Sbjct: 192 TCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVA 251
Query: 186 RVAQSSAISNLDHVIIKLARKL--PTGDVSALKKANAVQDEEP 226
V S +D+ KL L P G V KKA A +P
Sbjct: 252 EVCNSPLFKYMDNDYAKLGLSLVVPGGGVK--KKAAAPPQAKP 292
>sp|Q9CWZ7|SNAG_MOUSE Gamma-soluble NSF attachment protein OS=Mus musculus GN=Napg PE=1
SV=1
Length = 312
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPE 65
+ AAK E A + KE+ E KAS +Y E G A+ AL +A + +E+ PE
Sbjct: 72 FHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPE 131
Query: 66 DAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125
A+QLY + E +++ + A +L A+ + ++ ++ +AA + + +
Sbjct: 132 KAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYP 191
Query: 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIK 185
+ K ++ ++V+L+ ND+ AE+C + + F S+ +L+ Y + D +++
Sbjct: 192 TCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVS 251
Query: 186 RVAQSSAISNLDHVIIKLARKL--PTGDVSALKKANAVQDEEP 226
V S +D+ KL L P G + KK+ A +P
Sbjct: 252 EVCNSPLFKYMDNDYAKLGLSLVVPGGGIK--KKSPATPQAKP 292
>sp|Q99747|SNAG_HUMAN Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1
SV=1
Length = 312
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPE 65
+ AAK E A + KE+ E KAS +Y E G A+ AL +A + +E+ PE
Sbjct: 72 FHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPE 131
Query: 66 DAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125
A+QLY + E +++ + A +L A+ + ++ ++ +AA + + +
Sbjct: 132 KAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYP 191
Query: 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIK 185
+ K ++ ++V+L+ ND+ AE+C + + F S+ +L+ Y + D +++
Sbjct: 192 TCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVS 251
Query: 186 RVAQSSAISNLDHVIIKLARKL--PTGDVSALKKANAVQDEEP 226
V S +D+ KL L P G + KK+ A +P
Sbjct: 252 DVCNSPLFKYMDNDYAKLGLSLVVPGGGIK--KKSPATPQAKP 292
>sp|P78603|SEC17_COPC7 Vesicular-fusion protein SEC17 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=SEC17
PE=3 SV=2
Length = 289
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 3 SSPWDAAKHMESAAALAKELH-NWREVADFYRKASELYNECGRSQPASDALAKAARALED 61
+S W+ A + AA A +L ++E D + + +E +C S A +A AA+A +
Sbjct: 29 NSKWEEAGDLYQQAANAFKLEKQFKEAGDAFAREAECREKCKESLDAGNAWWNAAKAYKR 88
Query: 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK-LEKYADAATFLLRWG--LAA 118
P+ AIQ L + + A D + +Y++ + A LR G A
Sbjct: 89 GYPDLAIQALQQTIQHLVAGGRFRQAADREKEIAQIYLQETHDLSRACESFLRAGDWYAE 148
Query: 119 DKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATK------L 172
+ AT +QC Y A +Y F QA Y + D L S+ + + K L
Sbjct: 149 EDATATANQC--YKDAADLYAELEQFPQAITLYERVA--DHSLTSNLTKYSVKEYWLKSL 204
Query: 173 ISAYTEGDVEEIKRVAQ 189
+ GD+ +R AQ
Sbjct: 205 LCTVALGDIVTARRNAQ 221
>sp|A5VCY9|PNP_SPHWW Polyribonucleotide nucleotidyltransferase OS=Sphingomonas wittichii
(strain RW1 / DSM 6014 / JCM 10273) GN=pnp PE=3 SV=1
Length = 774
Score = 33.1 bits (74), Expect = 1.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVP 64
PW+ A + +AA K + V A +L N+ RS ++A AKA A DA P
Sbjct: 230 PWEMAPQADLSAAKTKLK---KLVGKDITAAYKLTNKSARSSALNEARAKAKEAFADATP 286
Query: 65 EDAI 68
+D +
Sbjct: 287 QDQM 290
>sp|P36005|KDX1_YEAST Serine/threonine-protein kinase KDX1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KDX1 PE=1 SV=1
Length = 433
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Query: 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQ 69
+H+ES A L E+ +EV DF RK R P S ++ +LEDA+P++ +Q
Sbjct: 339 EHIESMAELGNEV--IKEVFDF-RKVV-------RKHPISGDSPSSSLSLEDAIPQEVVQ 388
Query: 70 LY 71
++
Sbjct: 389 VH 390
>sp|Q9N4M4|ANC1_CAEEL Nuclear anchorage protein 1 OS=Caenorhabditis elegans GN=anc-1 PE=1
SV=3
Length = 8545
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 99 IKLEKYADAATFLLRWGLAADKCNATNSQ--CKAYLSAIIVYLYAND 143
I L + AD+ T LLRW + NA N Q C +Y++ I + + AND
Sbjct: 534 IILWRTADSVTLLLRWIKEYTQLNAENPQAKCASYINKITLTM-AND 579
>sp|A8GHJ4|NAPA_SERP5 Periplasmic nitrate reductase OS=Serratia proteamaculans (strain
568) GN=napA PE=3 SV=1
Length = 828
Score = 32.0 bits (71), Expect = 3.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 107 AATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFL 161
AA LL+ GL ++ + C A SA++ ++ + CY+D Q DAF+
Sbjct: 158 AAAKLLKAGLRSNNLDPNARHCMA--SAVVGFMRTFGMDEPMGCYDDIEQADAFV 210
>sp|Q9P4D0|SEC17_PICPG Vesicular-fusion protein SEC17 OS=Komagataella pastoris (strain
GS115 / ATCC 20864) GN=SEC17 PE=3 SV=2
Length = 297
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 41/241 (17%)
Query: 2 LSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALED 61
L +P DAA+ + A +R A+F + +ELY +
Sbjct: 89 LDAPSDAARCLNKAVEFFALKGQFRRGANFKAELAELYE------------------TKM 130
Query: 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI--KLEKYADAATFLLRWGLAAD 119
A P+ AI Y +A D E +A Y A ++ +++ + AA R +A +
Sbjct: 131 ADPKHAILAYEEAGEWYRGDSAEALANKCYVKAADLSCSDEVQDFLKAAESYER--IAKE 188
Query: 120 KCNATNSQCK-----AYLSAIIVYLYANDFKQAEKCYNDCSQVD-AFLRSDQNRCATKLI 173
N NS K + AI+ L ND+ A D F ++ + A KL+
Sbjct: 189 SLN--NSLAKWSLKDYFFKAILCRLALNDYPSASALLERFVSWDPTFEKTREYEFALKLV 246
Query: 174 SAYTEGDVEEIKRVAQS-SAISNLDHVIIKLARKLPTGDVSALKKANAVQDEEPLDENDL 232
EGD + I + IS LD+ +K+ K+ N ++D + L E+DL
Sbjct: 247 DGLKEGDPDIIASASHEYDQISRLDNFKVKILNKIK----------NNIRDSDDLAEDDL 296
Query: 233 T 233
T
Sbjct: 297 T 297
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 31.6 bits (70), Expect = 5.0, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 26 REVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEEDDKEQ 85
RE++ F+R A + + AK R+L PE I L D+ +L + ++
Sbjct: 753 RELSQFFRNAEKTLPQ-----------AKLTRSLAPLGPEPPIALVPDSTSLLVSGETKK 801
Query: 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144
D+ N +IK+E F L A + +AT + K +LS + + DF
Sbjct: 802 KLDDI----KNNFIKIENSNAVTAFKLSDYQHAHRSDATAASGKDFLSRLNTQVRTIDF 856
>sp|A0KIM1|NAPA_AERHH Periplasmic nitrate reductase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=napA PE=3
SV=1
Length = 829
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 107 AATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166
AA L++ GL + + C A SA++ ++ + CY+D Q DAF+ N
Sbjct: 160 AAAKLMKAGLRTNNLDPNARHCMA--SAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSN 217
Query: 167 RCATKLISAYTEGDVEEIKRVAQSSAISNLDHVIIKLA 204
I D + Q +S +H +LA
Sbjct: 218 MAEMHPILWSRISDRRLSHQDVQVHVLSTFEHRSFELA 255
>sp|B8F7K2|NAPA_HAEPS Periplasmic nitrate reductase OS=Haemophilus parasuis serovar 5
(strain SH0165) GN=napA PE=3 SV=1
Length = 827
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Query: 107 AATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166
A + L + GL ++ + C A SA + ++ + CY+D + DAF+ N
Sbjct: 156 AKSKLFKAGLRSNNIDPNARHCMA--SAAVAFMRTFGMDEPMGCYDDIEKADAFVLWGSN 213
Query: 167 RCATKLISAYTEGDVEEIKRVAQSSAISNLDHVIIKLARK----LPTGDVSALKK-ANAV 221
I D K+ A+ + +S +H +LA P GD++ + AN +
Sbjct: 214 MAEMHPILWSRISDRRLSKQDAKVAVLSTFEHRSFELADLPIVFKPQGDLAIMNYIANYL 273
Query: 222 QDEEPLDEN 230
+D++
Sbjct: 274 IQNNAIDQD 282
>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus
musculus GN=Lonrf3 PE=2 SV=1
Length = 753
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 2 LSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALED 61
+ +P + + A ALA E H RE + YR+ SE R Q ++ L + R L D
Sbjct: 66 VPTPLECKVLLTQADALASEGH-LREALEVYRQLSE------RQQLVAEQLEQLVRCLAD 118
Query: 62 AVPEDAI 68
+VP++ +
Sbjct: 119 SVPQEEL 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,977,876
Number of Sequences: 539616
Number of extensions: 2773037
Number of successful extensions: 8042
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8010
Number of HSP's gapped (non-prelim): 40
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)