Query 026767
Match_columns 233
No_of_seqs 200 out of 1215
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 21:40:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ifu_A Gamma-SNAP; membrane fu 100.0 7.5E-30 2.6E-34 214.5 25.8 209 2-211 69-278 (307)
2 1qqe_A Vesicular transport pro 100.0 1.3E-26 4.5E-31 193.3 23.4 207 2-208 70-281 (292)
3 1qqe_A Vesicular transport pro 99.9 1.3E-23 4.3E-28 175.2 26.3 187 5-191 33-225 (292)
4 2ifu_A Gamma-SNAP; membrane fu 99.9 3.5E-23 1.2E-27 173.7 22.1 189 3-192 30-222 (307)
5 4a1s_A PINS, partner of inscut 99.9 9.3E-21 3.2E-25 163.1 21.9 203 3-205 160-385 (411)
6 3ulq_A Response regulator aspa 99.9 3E-20 1E-24 159.5 25.0 189 3-191 137-332 (383)
7 3ro3_A PINS homolog, G-protein 99.9 3E-20 1E-24 138.3 21.8 157 1-157 1-158 (164)
8 3gw4_A Uncharacterized protein 99.9 2E-20 6.7E-25 145.7 19.7 173 3-175 20-196 (203)
9 3q15_A PSP28, response regulat 99.9 1.6E-19 5.4E-24 155.0 26.9 154 3-157 135-290 (378)
10 3ulq_A Response regulator aspa 99.9 2.7E-20 9.4E-25 159.8 21.8 178 14-191 108-290 (383)
11 3q15_A PSP28, response regulat 99.9 6.1E-20 2.1E-24 157.6 21.4 181 11-191 103-287 (378)
12 3sf4_A G-protein-signaling mod 99.8 3.1E-19 1.1E-23 152.3 22.2 194 3-196 121-340 (406)
13 3ro2_A PINS homolog, G-protein 99.8 3.9E-19 1.3E-23 147.0 22.1 193 3-195 117-335 (338)
14 3sf4_A G-protein-signaling mod 99.8 5.7E-19 1.9E-23 150.7 23.2 189 3-191 81-293 (406)
15 4a1s_A PINS, partner of inscut 99.8 6.8E-19 2.3E-23 151.4 22.7 189 3-191 120-329 (411)
16 3edt_B KLC 2, kinesin light ch 99.8 1.4E-18 4.9E-23 140.8 23.3 188 4-191 38-278 (283)
17 3ro2_A PINS homolog, G-protein 99.8 1.7E-18 5.9E-23 143.1 22.8 187 5-191 79-289 (338)
18 3nf1_A KLC 1, kinesin light ch 99.8 3.5E-18 1.2E-22 140.6 23.2 188 4-191 64-304 (311)
19 3nf1_A KLC 1, kinesin light ch 99.8 2.4E-18 8.1E-23 141.7 22.1 188 4-191 22-221 (311)
20 3gw4_A Uncharacterized protein 99.8 2.1E-17 7.2E-22 128.4 20.3 173 21-199 4-183 (203)
21 3u3w_A Transcriptional activat 99.8 1E-17 3.4E-22 139.2 19.0 181 11-191 77-263 (293)
22 1hz4_A MALT regulatory protein 99.8 1.1E-16 3.9E-21 136.3 24.3 187 4-191 48-241 (373)
23 2qfc_A PLCR protein; TPR, HTH, 99.8 1.5E-17 5.1E-22 138.1 17.3 191 8-198 74-272 (293)
24 1hz4_A MALT regulatory protein 99.8 1.1E-16 3.9E-21 136.3 22.9 186 5-191 10-200 (373)
25 2qfc_A PLCR protein; TPR, HTH, 99.8 3.6E-17 1.2E-21 135.8 18.4 152 8-159 114-268 (293)
26 3edt_B KLC 2, kinesin light ch 99.8 6.4E-17 2.2E-21 130.9 19.5 172 20-191 12-195 (283)
27 3u3w_A Transcriptional activat 99.8 2.6E-17 8.7E-22 136.7 17.0 151 9-159 115-268 (293)
28 4gyw_A UDP-N-acetylglucosamine 99.8 2.8E-17 9.6E-22 152.9 19.0 167 3-191 3-171 (723)
29 3ro3_A PINS homolog, G-protein 99.8 6.8E-17 2.3E-21 119.9 17.6 150 42-191 2-155 (164)
30 3vtx_A MAMA; tetratricopeptide 99.7 7.1E-16 2.4E-20 118.6 18.6 163 8-192 4-168 (184)
31 4b4t_Q 26S proteasome regulato 99.7 1.5E-15 5.2E-20 131.4 20.9 185 7-191 53-242 (434)
32 3uq3_A Heat shock protein STI1 99.7 3.7E-15 1.3E-19 119.2 21.6 175 6-191 2-199 (258)
33 2pl2_A Hypothetical conserved 99.7 7.2E-16 2.5E-20 122.7 16.8 160 9-191 5-177 (217)
34 3uq3_A Heat shock protein STI1 99.7 4.1E-15 1.4E-19 119.0 20.9 173 9-191 38-233 (258)
35 2pl2_A Hypothetical conserved 99.7 1.1E-15 3.9E-20 121.6 16.9 160 9-191 39-211 (217)
36 4i17_A Hypothetical protein; T 99.7 5.6E-15 1.9E-19 117.5 18.1 157 10-181 8-169 (228)
37 4eqf_A PEX5-related protein; a 99.6 1.4E-14 4.7E-19 122.7 18.1 167 9-191 99-307 (365)
38 2vq2_A PILW, putative fimbrial 99.6 4.7E-14 1.6E-18 110.4 19.0 167 5-191 4-173 (225)
39 2ho1_A Type 4 fimbrial biogene 99.6 4.5E-14 1.5E-18 113.2 18.6 168 4-191 32-201 (252)
40 3as5_A MAMA; tetratricopeptide 99.6 2.5E-14 8.4E-19 108.4 16.1 168 2-191 1-170 (186)
41 3hym_B Cell division cycle pro 99.6 3.2E-14 1.1E-18 117.8 17.4 170 10-195 126-301 (330)
42 4eqf_A PEX5-related protein; a 99.6 2.9E-14 9.8E-19 120.7 17.0 171 5-191 61-273 (365)
43 4gcn_A Protein STI-1; structur 99.6 3.5E-14 1.2E-18 103.7 15.3 107 5-117 4-112 (127)
44 2ho1_A Type 4 fimbrial biogene 99.6 3.1E-13 1.1E-17 108.3 21.2 163 9-191 71-235 (252)
45 2q7f_A YRRB protein; TPR, prot 99.6 1.7E-13 5.9E-18 108.7 19.0 161 9-191 57-219 (243)
46 3qky_A Outer membrane assembly 99.6 1.1E-13 3.6E-18 112.5 17.9 174 8-192 14-222 (261)
47 1fch_A Peroxisomal targeting s 99.6 9.2E-14 3.2E-18 117.2 18.2 167 9-191 98-311 (368)
48 4b4t_Q 26S proteasome regulato 99.6 1E-13 3.5E-18 119.8 18.6 176 16-191 11-201 (434)
49 3u4t_A TPR repeat-containing p 99.6 7.4E-14 2.5E-18 113.1 16.2 163 10-191 4-168 (272)
50 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.5E-13 5E-18 107.7 16.8 137 7-158 4-151 (213)
51 4abn_A Tetratricopeptide repea 99.6 3.5E-14 1.2E-18 126.0 14.5 165 7-191 100-284 (474)
52 1fch_A Peroxisomal targeting s 99.6 9.1E-14 3.1E-18 117.2 16.1 171 9-191 132-356 (368)
53 1w3b_A UDP-N-acetylglucosamine 99.6 2.7E-13 9.2E-18 115.8 18.8 125 51-191 205-331 (388)
54 4g1t_A Interferon-induced prot 99.6 5.4E-14 1.8E-18 122.9 14.1 177 5-191 47-273 (472)
55 4gcn_A Protein STI-1; structur 99.6 1.2E-13 4.2E-18 100.7 13.8 106 46-157 5-112 (127)
56 1w3b_A UDP-N-acetylglucosamine 99.5 3.9E-13 1.3E-17 114.7 19.0 167 9-191 169-365 (388)
57 4abn_A Tetratricopeptide repea 99.5 1.2E-13 4E-18 122.5 16.1 163 9-191 137-318 (474)
58 2vq2_A PILW, putative fimbrial 99.5 1.8E-12 6E-17 101.3 21.0 164 9-191 42-208 (225)
59 4ga2_A E3 SUMO-protein ligase 99.5 1.5E-14 5.2E-19 108.6 8.3 126 14-157 2-129 (150)
60 3n71_A Histone lysine methyltr 99.5 4.5E-13 1.5E-17 119.4 19.1 147 9-155 309-462 (490)
61 4gyw_A UDP-N-acetylglucosamine 99.5 7.9E-14 2.7E-18 129.7 14.5 130 9-156 43-173 (723)
62 3rjv_A Putative SEL1 repeat pr 99.5 7.4E-13 2.5E-17 104.9 17.7 160 7-191 16-194 (212)
63 1xnf_A Lipoprotein NLPI; TPR, 99.5 1E-12 3.5E-17 106.1 18.5 168 5-191 39-241 (275)
64 3vtx_A MAMA; tetratricopeptide 99.5 5.7E-13 1.9E-17 102.1 16.0 131 9-157 39-170 (184)
65 3urz_A Uncharacterized protein 99.5 1.8E-12 6.2E-17 102.2 19.2 161 9-192 4-184 (208)
66 2xpi_A Anaphase-promoting comp 99.5 7.8E-13 2.7E-17 118.7 19.0 173 9-191 373-576 (597)
67 2yhc_A BAMD, UPF0169 lipoprote 99.5 2.3E-12 7.8E-17 102.7 19.7 175 9-191 4-210 (225)
68 3u4t_A TPR repeat-containing p 99.5 2.1E-13 7.2E-18 110.3 13.7 185 10-209 38-266 (272)
69 1ouv_A Conserved hypothetical 99.5 1.4E-12 4.8E-17 106.2 18.6 123 9-155 6-141 (273)
70 3hym_B Cell division cycle pro 99.5 4.5E-13 1.5E-17 110.8 15.8 165 9-191 90-262 (330)
71 2h6f_A Protein farnesyltransfe 99.5 3.1E-13 1.1E-17 116.9 15.1 164 6-191 94-266 (382)
72 3ieg_A DNAJ homolog subfamily 99.5 1.5E-12 5.1E-17 108.6 18.8 174 10-195 155-337 (359)
73 2q7f_A YRRB protein; TPR, prot 99.5 2.4E-13 8.3E-18 107.9 12.8 165 5-191 19-185 (243)
74 3fp2_A TPR repeat-containing p 99.5 1.5E-12 5.2E-17 115.1 19.3 167 9-191 310-488 (537)
75 4gco_A Protein STI-1; structur 99.5 9.9E-13 3.4E-17 95.9 14.4 99 7-117 11-110 (126)
76 1ouv_A Conserved hypothetical 99.5 2.5E-12 8.4E-17 104.8 18.2 153 9-191 38-212 (273)
77 3cv0_A Peroxisome targeting si 99.5 4.7E-12 1.6E-16 104.5 20.1 93 89-191 173-266 (327)
78 3cv0_A Peroxisome targeting si 99.5 4.1E-12 1.4E-16 104.9 19.6 171 5-191 17-232 (327)
79 3ieg_A DNAJ homolog subfamily 99.5 3.4E-12 1.2E-16 106.4 18.2 166 10-191 38-214 (359)
80 4i17_A Hypothetical protein; T 99.5 1.1E-12 3.8E-17 104.1 14.2 123 10-144 43-169 (228)
81 3fp2_A TPR repeat-containing p 99.5 3.1E-12 1.1E-16 113.1 18.5 162 7-191 241-404 (537)
82 2gw1_A Mitochondrial precursor 99.5 1.7E-12 5.8E-17 113.9 16.7 167 9-191 304-475 (514)
83 2y4t_A DNAJ homolog subfamily 99.5 5.3E-12 1.8E-16 109.3 19.6 170 10-191 178-355 (450)
84 1a17_A Serine/threonine protei 99.5 3.5E-12 1.2E-16 95.3 16.1 135 5-155 9-144 (166)
85 2xpi_A Anaphase-promoting comp 99.5 5.3E-12 1.8E-16 113.3 19.9 171 9-191 339-542 (597)
86 2fo7_A Synthetic consensus TPR 99.5 5.3E-12 1.8E-16 90.2 16.1 129 10-156 2-131 (136)
87 4gco_A Protein STI-1; structur 99.5 1.2E-12 4.2E-17 95.3 12.8 99 47-157 11-110 (126)
88 1p5q_A FKBP52, FK506-binding p 99.5 2.1E-12 7.3E-17 109.5 15.9 136 7-154 145-291 (336)
89 2hr2_A Hypothetical protein; a 99.5 2.3E-12 7.8E-17 97.7 14.1 112 8-120 10-134 (159)
90 2h6f_A Protein farnesyltransfe 99.4 1.6E-12 5.6E-17 112.4 14.2 160 9-191 131-302 (382)
91 3as5_A MAMA; tetratricopeptide 99.4 1.1E-11 3.8E-16 93.6 17.2 130 9-156 42-172 (186)
92 2pzi_A Probable serine/threoni 99.4 3E-12 1E-16 118.4 16.1 161 8-191 432-599 (681)
93 3qky_A Outer membrane assembly 99.4 1.3E-11 4.4E-16 100.0 17.7 144 8-157 51-224 (261)
94 3mkr_A Coatomer subunit epsilo 99.4 6.7E-12 2.3E-16 104.3 16.3 168 10-202 102-273 (291)
95 2y4t_A DNAJ homolog subfamily 99.4 1.6E-11 5.4E-16 106.3 18.8 168 12-191 146-321 (450)
96 2hr2_A Hypothetical protein; a 99.4 1E-11 3.6E-16 94.0 15.2 111 47-157 9-131 (159)
97 3upv_A Heat shock protein STI1 99.4 1.5E-11 5.2E-16 88.5 15.5 119 8-138 3-122 (126)
98 1xnf_A Lipoprotein NLPI; TPR, 99.4 6.5E-12 2.2E-16 101.4 13.7 153 21-191 17-170 (275)
99 3gyz_A Chaperone protein IPGC; 99.4 9.4E-12 3.2E-16 93.8 13.6 98 8-117 35-133 (151)
100 1p5q_A FKBP52, FK506-binding p 99.4 8.2E-12 2.8E-16 105.9 14.7 163 22-200 126-299 (336)
101 3rkv_A Putative peptidylprolyl 99.4 8.4E-12 2.9E-16 94.1 13.1 107 5-117 7-126 (162)
102 2gw1_A Mitochondrial precursor 99.4 2.6E-11 8.9E-16 106.3 17.8 174 5-191 2-263 (514)
103 3n71_A Histone lysine methyltr 99.4 1.9E-11 6.6E-16 108.8 17.0 138 54-191 314-461 (490)
104 3gyz_A Chaperone protein IPGC; 99.4 1.4E-11 4.7E-16 92.9 13.4 102 45-158 32-134 (151)
105 2fbn_A 70 kDa peptidylprolyl i 99.4 1E-11 3.6E-16 96.6 13.2 131 6-148 35-176 (198)
106 2vsy_A XCC0866; transferase, g 99.4 8.1E-12 2.8E-16 112.6 13.8 148 22-191 2-154 (568)
107 4ga2_A E3 SUMO-protein ligase 99.4 1.2E-11 4.2E-16 92.5 12.4 121 5-143 27-149 (150)
108 3rkv_A Putative peptidylprolyl 99.3 1.9E-11 6.4E-16 92.1 13.3 108 44-157 6-126 (162)
109 2vsy_A XCC0866; transferase, g 99.3 2.3E-11 7.9E-16 109.6 15.5 131 8-156 22-156 (568)
110 4g1t_A Interferon-induced prot 99.3 8.1E-12 2.8E-16 109.0 12.1 136 22-157 24-167 (472)
111 3sz7_A HSC70 cochaperone (SGT) 99.3 4.4E-11 1.5E-15 90.2 14.4 102 5-118 7-109 (164)
112 2vyi_A SGTA protein; chaperone 99.3 8.2E-11 2.8E-15 83.7 15.0 122 5-144 8-130 (131)
113 2lni_A Stress-induced-phosphop 99.3 3.2E-11 1.1E-15 86.5 12.6 121 5-143 12-133 (133)
114 2yhc_A BAMD, UPF0169 lipoprote 99.3 1.2E-10 3.9E-15 92.7 16.8 142 8-155 40-211 (225)
115 3urz_A Uncharacterized protein 99.3 8.6E-11 3E-15 92.5 15.8 126 14-158 59-187 (208)
116 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 4.1E-11 1.4E-15 105.7 15.1 131 7-149 266-406 (457)
117 1elr_A TPR2A-domain of HOP; HO 99.3 1.3E-10 4.4E-15 82.8 14.9 105 7-117 2-108 (131)
118 3qou_A Protein YBBN; thioredox 99.3 4.2E-11 1.5E-15 99.1 14.0 162 9-191 117-281 (287)
119 2pzi_A Probable serine/threoni 99.3 2.3E-11 8E-16 112.4 13.6 154 20-191 402-560 (681)
120 3sz7_A HSC70 cochaperone (SGT) 99.3 5E-11 1.7E-15 89.9 13.2 103 43-157 5-108 (164)
121 3upv_A Heat shock protein STI1 99.3 6.2E-11 2.1E-15 85.2 13.0 117 47-175 2-121 (126)
122 1ihg_A Cyclophilin 40; ppiase 99.3 6.6E-11 2.3E-15 101.8 14.8 132 6-149 220-362 (370)
123 1a17_A Serine/threonine protei 99.3 1.3E-10 4.3E-15 86.7 14.5 131 47-191 11-143 (166)
124 2ond_A Cleavage stimulation fa 99.3 2E-10 6.8E-15 95.6 17.0 167 8-191 98-267 (308)
125 2r5s_A Uncharacterized protein 99.3 4.5E-11 1.6E-15 91.4 12.0 160 10-191 7-170 (176)
126 1hh8_A P67PHOX, NCF-2, neutrop 99.3 8.1E-11 2.8E-15 91.8 13.3 130 47-191 4-147 (213)
127 1na0_A Designed protein CTPR3; 99.3 3.5E-10 1.2E-14 79.7 15.0 119 6-142 6-125 (125)
128 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 1.6E-10 5.3E-15 102.0 15.9 156 24-195 249-415 (457)
129 3qwp_A SET and MYND domain-con 99.3 2.2E-10 7.5E-15 100.5 16.6 124 17-140 295-425 (429)
130 2fo7_A Synthetic consensus TPR 99.2 3.6E-10 1.2E-14 80.4 14.9 126 50-191 2-129 (136)
131 3qww_A SET and MYND domain-con 99.2 2.6E-10 9E-15 100.0 16.8 101 21-121 310-415 (433)
132 2vgx_A Chaperone SYCD; alterna 99.2 2.4E-10 8.1E-15 85.4 13.9 102 6-119 18-120 (148)
133 2c2l_A CHIP, carboxy terminus 99.2 1.1E-10 3.8E-15 96.3 13.0 165 9-191 4-196 (281)
134 2vgx_A Chaperone SYCD; alterna 99.2 2.5E-10 8.5E-15 85.2 13.2 101 45-157 17-118 (148)
135 2fbn_A 70 kDa peptidylprolyl i 99.2 1.4E-10 4.8E-15 90.1 12.1 154 13-182 8-173 (198)
136 2e2e_A Formate-dependent nitri 99.2 2.3E-10 7.8E-15 87.1 12.9 121 20-158 21-145 (177)
137 1elr_A TPR2A-domain of HOP; HO 99.2 5.3E-10 1.8E-14 79.5 14.1 106 47-158 2-109 (131)
138 2ond_A Cleavage stimulation fa 99.2 2.7E-10 9.3E-15 94.8 14.2 162 9-191 50-229 (308)
139 2xm6_A Protein corresponding t 99.2 6.5E-10 2.2E-14 98.3 17.4 152 10-191 256-429 (490)
140 2xcb_A PCRH, regulatory protei 99.2 9.4E-10 3.2E-14 81.0 15.5 99 8-118 17-116 (142)
141 1ihg_A Cyclophilin 40; ppiase 99.2 1.9E-10 6.5E-15 98.9 12.8 131 47-187 221-363 (370)
142 3q49_B STIP1 homology and U bo 99.2 5.8E-10 2E-14 80.7 13.6 100 9-120 9-109 (137)
143 1wao_1 Serine/threonine protei 99.2 6.4E-12 2.2E-16 111.6 3.4 129 6-152 3-134 (477)
144 2xm6_A Protein corresponding t 99.2 1.4E-09 4.6E-14 96.2 18.2 123 9-155 39-178 (490)
145 3rjv_A Putative SEL1 repeat pr 99.2 3.4E-10 1.2E-14 89.4 12.7 139 26-191 3-155 (212)
146 2lni_A Stress-induced-phosphop 99.2 3.7E-10 1.3E-14 80.8 11.8 116 45-176 12-128 (133)
147 2xcb_A PCRH, regulatory protei 99.2 3.2E-10 1.1E-14 83.6 11.7 101 45-157 14-115 (142)
148 3e4b_A ALGK; tetratricopeptide 99.2 1.1E-09 3.9E-14 96.3 17.0 150 11-191 178-348 (452)
149 3q49_B STIP1 homology and U bo 99.2 6.2E-10 2.1E-14 80.6 12.8 98 48-157 8-106 (137)
150 3qww_A SET and MYND domain-con 99.2 8.7E-10 3E-14 96.7 15.8 98 61-158 311-412 (433)
151 3mkr_A Coatomer subunit epsilo 99.2 1.2E-09 4.3E-14 90.5 15.8 129 9-157 130-264 (291)
152 3qwp_A SET and MYND domain-con 99.2 6.3E-10 2.2E-14 97.5 14.4 127 50-176 289-423 (429)
153 2vyi_A SGTA protein; chaperone 99.1 1.9E-09 6.4E-14 76.5 14.4 120 45-180 8-129 (131)
154 1elw_A TPR1-domain of HOP; HOP 99.1 1.2E-09 4E-14 76.2 12.9 95 9-115 4-99 (118)
155 1na0_A Designed protein CTPR3; 99.1 1.9E-09 6.5E-14 75.8 13.9 116 45-176 5-121 (125)
156 1elw_A TPR1-domain of HOP; HOP 99.1 4.1E-09 1.4E-13 73.4 14.9 99 48-158 3-102 (118)
157 1hxi_A PEX5, peroxisome target 99.1 6E-10 2E-14 80.3 10.3 93 52-156 20-113 (121)
158 1hxi_A PEX5, peroxisome target 99.1 5.3E-10 1.8E-14 80.5 9.2 97 9-117 17-114 (121)
159 2dba_A Smooth muscle cell asso 99.1 3.5E-09 1.2E-13 77.1 13.8 100 9-117 28-128 (148)
160 2if4_A ATFKBP42; FKBP-like, al 99.1 6.1E-11 2.1E-15 100.6 4.8 117 6-157 176-293 (338)
161 2xev_A YBGF; tetratricopeptide 99.1 2.4E-09 8.2E-14 76.6 12.4 103 10-118 3-106 (129)
162 2r5s_A Uncharacterized protein 99.1 4.6E-10 1.6E-14 85.7 8.9 131 8-155 39-171 (176)
163 2l6j_A TPR repeat-containing p 99.0 1E-10 3.6E-15 81.5 3.7 96 9-110 4-100 (111)
164 2xev_A YBGF; tetratricopeptide 99.0 3.6E-09 1.2E-13 75.7 11.7 101 51-157 4-105 (129)
165 2if4_A ATFKBP42; FKBP-like, al 99.0 6.8E-10 2.3E-14 94.1 9.0 112 47-191 177-290 (338)
166 2l6j_A TPR repeat-containing p 99.0 1.3E-10 4.4E-15 81.0 3.7 100 48-153 3-103 (111)
167 2kck_A TPR repeat; tetratricop 99.0 1.5E-09 5.3E-14 75.0 8.7 98 50-157 7-106 (112)
168 2dba_A Smooth muscle cell asso 99.0 8.7E-09 3E-13 75.0 12.9 102 47-157 26-128 (148)
169 1klx_A Cysteine rich protein B 99.0 7.2E-09 2.5E-13 76.4 12.4 109 23-157 9-126 (138)
170 1wao_1 Serine/threonine protei 99.0 2.1E-10 7.2E-15 101.8 4.6 127 47-189 4-134 (477)
171 3qou_A Protein YBBN; thioredox 99.0 2E-09 6.7E-14 89.0 10.2 131 9-155 151-282 (287)
172 2ooe_A Cleavage stimulation fa 99.0 2.5E-08 8.6E-13 88.9 17.5 166 9-191 321-489 (530)
173 3k9i_A BH0479 protein; putativ 99.0 1.1E-09 3.8E-14 77.9 7.1 89 21-118 2-91 (117)
174 3k9i_A BH0479 protein; putativ 98.9 3E-09 1E-13 75.6 8.0 88 61-157 3-90 (117)
175 2ooe_A Cleavage stimulation fa 98.9 2.6E-08 8.9E-13 88.8 15.6 162 9-191 272-451 (530)
176 2kck_A TPR repeat; tetratricop 98.9 1.3E-09 4.5E-14 75.4 5.3 99 9-117 6-106 (112)
177 4f3v_A ESX-1 secretion system 98.9 1.3E-08 4.3E-13 84.2 12.0 132 10-156 103-236 (282)
178 3e4b_A ALGK; tetratricopeptide 98.9 5.2E-08 1.8E-12 85.6 16.0 169 9-204 141-325 (452)
179 2c2l_A CHIP, carboxy terminus 98.9 8.1E-09 2.8E-13 85.0 10.0 96 49-156 4-100 (281)
180 1xi4_A Clathrin heavy chain; a 98.9 5.4E-08 1.8E-12 94.8 16.9 158 9-191 1105-1306(1630)
181 2e2e_A Formate-dependent nitri 98.9 2.3E-08 7.9E-13 75.8 11.6 98 9-118 44-145 (177)
182 1na3_A Designed protein CTPR2; 98.9 4.1E-08 1.4E-12 65.6 11.0 85 46-142 6-91 (91)
183 4f3v_A ESX-1 secretion system 98.8 2.3E-08 7.9E-13 82.6 8.8 113 83-202 131-245 (282)
184 1xi4_A Clathrin heavy chain; a 98.7 5.6E-07 1.9E-11 87.8 18.6 155 14-191 1054-1247(1630)
185 1na3_A Designed protein CTPR2; 98.7 1E-07 3.4E-12 63.6 9.5 87 4-102 4-91 (91)
186 1zu2_A Mitochondrial import re 98.7 4.7E-08 1.6E-12 73.8 7.5 84 62-157 16-120 (158)
187 2kat_A Uncharacterized protein 98.7 1.8E-07 6.1E-12 65.8 9.9 83 27-121 3-86 (115)
188 3ma5_A Tetratricopeptide repea 98.7 3.1E-07 1.1E-11 63.3 10.8 67 49-121 7-74 (100)
189 1zu2_A Mitochondrial import re 98.7 4.3E-08 1.5E-12 74.0 6.5 85 21-117 14-120 (158)
190 3ma5_A Tetratricopeptide repea 98.6 3.5E-07 1.2E-11 63.1 10.7 73 8-86 6-79 (100)
191 1b89_A Protein (clathrin heavy 98.6 9.9E-08 3.4E-12 83.4 8.3 163 11-191 63-266 (449)
192 2kat_A Uncharacterized protein 98.5 1.4E-06 4.9E-11 61.0 11.4 71 9-85 19-90 (115)
193 1b89_A Protein (clathrin heavy 98.5 1.2E-06 4.2E-11 76.5 12.4 128 11-158 124-273 (449)
194 1klx_A Cysteine rich protein B 98.5 1.1E-06 3.9E-11 64.4 10.5 87 15-117 31-126 (138)
195 3txn_A 26S proteasome regulato 98.4 5.2E-05 1.8E-09 65.4 21.0 176 13-191 103-281 (394)
196 3mv2_B Coatomer subunit epsilo 98.4 1.9E-05 6.6E-10 65.9 17.1 177 11-202 102-291 (310)
197 2v5f_A Prolyl 4-hydroxylase su 98.4 5.8E-06 2E-10 57.5 11.0 68 50-117 6-75 (104)
198 2kc7_A BFR218_protein; tetratr 98.3 3.7E-06 1.3E-10 57.1 8.1 86 13-118 4-91 (99)
199 3txn_A 26S proteasome regulato 98.3 0.00013 4.6E-09 62.8 19.5 188 10-198 20-216 (394)
200 2v5f_A Prolyl 4-hydroxylase su 98.2 1.7E-05 5.9E-10 55.1 10.2 73 9-81 5-79 (104)
201 2kc7_A BFR218_protein; tetratr 98.1 4.2E-05 1.4E-09 51.6 9.9 60 92-157 4-64 (99)
202 3ffl_A Anaphase-promoting comp 98.1 0.00013 4.5E-09 54.9 13.2 107 47-153 18-147 (167)
203 3ffl_A Anaphase-promoting comp 98.0 0.0004 1.4E-08 52.3 14.0 100 13-113 25-147 (167)
204 3dra_A Protein farnesyltransfe 97.9 0.00057 2E-08 56.9 15.8 170 11-199 105-294 (306)
205 3bee_A Putative YFRE protein; 97.8 0.00035 1.2E-08 47.5 10.6 65 89-159 7-75 (93)
206 2wpv_A GET4, UPF0363 protein Y 97.8 0.011 3.9E-07 49.1 21.8 204 3-206 27-287 (312)
207 4g26_A Pentatricopeptide repea 97.8 0.003 1E-07 56.1 19.0 162 12-191 29-201 (501)
208 3mv2_B Coatomer subunit epsilo 97.8 0.00074 2.5E-08 56.3 13.9 133 50-191 101-237 (310)
209 3ly7_A Transcriptional activat 97.7 0.0024 8.4E-08 54.3 16.2 120 25-157 215-339 (372)
210 1dce_A Protein (RAB geranylger 97.7 0.00031 1.1E-08 63.4 11.2 129 10-156 64-220 (567)
211 1pc2_A Mitochondria fission pr 97.7 0.0012 4.2E-08 49.1 12.4 99 64-174 14-115 (152)
212 3u64_A Protein TP_0956; tetrat 97.6 0.0016 5.3E-08 53.7 13.4 88 63-159 178-271 (301)
213 1dce_A Protein (RAB geranylger 97.5 0.0033 1.1E-07 56.7 16.2 120 20-157 39-173 (567)
214 4e6h_A MRNA 3'-END-processing 97.5 0.0048 1.6E-07 56.9 16.9 167 10-191 344-530 (679)
215 3ly7_A Transcriptional activat 97.5 0.0023 7.8E-08 54.5 13.5 132 62-205 213-350 (372)
216 3dra_A Protein farnesyltransfe 97.5 0.0023 8E-08 53.2 13.1 82 62-155 124-213 (306)
217 4b4t_P 26S proteasome regulato 97.4 0.018 6E-07 50.4 18.2 182 7-191 135-318 (445)
218 4e6h_A MRNA 3'-END-processing 97.3 0.022 7.4E-07 52.5 18.2 168 12-191 381-567 (679)
219 4b4t_P 26S proteasome regulato 97.2 0.051 1.7E-06 47.4 19.6 111 48-158 136-248 (445)
220 4b4t_R RPN7, 26S proteasome re 97.2 0.0022 7.4E-08 55.9 10.4 123 30-155 111-235 (429)
221 3dss_A Geranylgeranyl transfer 97.1 0.055 1.9E-06 45.4 18.1 167 10-198 109-309 (331)
222 3bee_A Putative YFRE protein; 97.1 0.0013 4.3E-08 44.7 6.5 63 49-117 6-72 (93)
223 4b4t_R RPN7, 26S proteasome re 97.1 0.0054 1.8E-07 53.4 12.1 132 9-144 131-263 (429)
224 3lpz_A GET4 (YOR164C homolog); 97.1 0.11 3.7E-06 43.6 23.8 191 3-196 26-277 (336)
225 3u64_A Protein TP_0956; tetrat 97.0 0.0036 1.2E-07 51.5 9.5 84 25-117 179-269 (301)
226 1pc2_A Mitochondria fission pr 96.9 0.034 1.2E-06 41.2 13.3 82 42-133 27-112 (152)
227 3q7a_A Farnesyltransferase alp 96.9 0.0087 3E-07 50.6 10.9 126 12-155 91-235 (349)
228 2wpv_A GET4, UPF0363 protein Y 96.9 0.037 1.3E-06 46.0 14.3 132 21-153 25-159 (312)
229 3q7a_A Farnesyltransferase alp 96.8 0.022 7.7E-07 48.1 12.9 160 10-192 55-235 (349)
230 4b4t_S RPN3, 26S proteasome re 96.7 0.0038 1.3E-07 55.3 7.8 143 40-191 222-367 (523)
231 3dss_A Geranylgeranyl transfer 96.7 0.03 1E-06 47.0 12.9 117 25-159 90-225 (331)
232 1nzn_A CGI-135 protein, fissio 96.7 0.039 1.3E-06 39.5 11.3 80 89-174 36-118 (126)
233 4g26_A Pentatricopeptide repea 96.5 0.11 3.7E-06 46.0 15.6 97 49-155 105-202 (501)
234 4h7y_A Dual specificity protei 96.4 0.041 1.4E-06 40.7 9.9 97 54-157 18-123 (161)
235 3lpz_A GET4 (YOR164C homolog); 96.2 0.22 7.4E-06 41.8 15.0 131 21-152 24-160 (336)
236 2uy1_A Cleavage stimulation fa 96.1 0.31 1.1E-05 42.9 16.1 147 27-191 197-380 (493)
237 3mkq_A Coatomer beta'-subunit; 96.0 0.95 3.2E-05 41.4 20.8 24 90-113 683-706 (814)
238 3o48_A Mitochondria fission 1 95.5 0.44 1.5E-05 34.3 12.9 80 88-174 40-122 (134)
239 4b4t_O 26S proteasome regulato 95.0 0.95 3.2E-05 38.7 14.9 170 17-191 84-273 (393)
240 4h7y_A Dual specificity protei 95.0 0.3 1E-05 36.1 10.0 100 13-118 17-124 (161)
241 2ff4_A Probable regulatory pro 94.9 0.31 1.1E-05 41.6 11.7 89 61-155 128-232 (388)
242 1ya0_A SMG-7 transcript varian 94.9 0.086 2.9E-06 46.7 8.2 62 49-116 152-214 (497)
243 2ff4_A Probable regulatory pro 94.9 0.39 1.3E-05 40.9 12.1 99 20-126 126-244 (388)
244 1nzn_A CGI-135 protein, fissio 94.7 0.79 2.7E-05 32.6 12.0 96 26-135 18-117 (126)
245 3mkq_A Coatomer beta'-subunit; 94.6 0.85 2.9E-05 41.8 14.5 15 98-112 746-760 (814)
246 1y8m_A FIS1; mitochondria, unk 94.3 1.1 3.7E-05 32.6 12.7 80 88-174 39-121 (144)
247 3mkq_B Coatomer subunit alpha; 94.3 1.3 4.4E-05 33.5 15.2 123 22-191 18-141 (177)
248 4gns_B Protein CSD3, chitin bi 94.0 0.56 1.9E-05 43.6 11.7 87 62-154 299-397 (754)
249 2uy1_A Cleavage stimulation fa 94.0 0.88 3E-05 40.0 12.7 124 9-155 286-411 (493)
250 1ya0_A SMG-7 transcript varian 92.8 0.29 9.8E-06 43.3 7.5 63 8-76 151-214 (497)
251 3spa_A Mtrpol, DNA-directed RN 92.5 2.1 7E-05 41.3 13.2 100 49-155 127-228 (1134)
252 2yin_A DOCK2, dedicator of cyt 92.5 4.9 0.00017 34.8 14.7 126 10-139 16-144 (436)
253 4b4t_S RPN3, 26S proteasome re 92.4 0.18 6.3E-06 44.7 5.6 133 21-156 148-298 (523)
254 2crb_A Nuclear receptor bindin 92.1 0.56 1.9E-05 31.3 6.3 39 3-41 9-47 (97)
255 3o48_A Mitochondria fission 1 91.5 2.9 9.8E-05 30.0 11.1 85 42-135 35-121 (134)
256 3t5x_A PCI domain-containing p 91.3 0.83 2.8E-05 35.3 7.8 94 86-191 12-105 (203)
257 4fhn_B Nucleoporin NUP120; pro 91.2 1.5 5.1E-05 42.7 11.0 100 13-113 846-963 (1139)
258 3mkq_B Coatomer subunit alpha; 90.6 3.9 0.00013 30.8 10.6 76 54-154 11-86 (177)
259 2crb_A Nuclear receptor bindin 90.5 1.2 4.2E-05 29.7 6.7 35 86-120 13-47 (97)
260 3spa_A Mtrpol, DNA-directed RN 89.4 2.7 9.3E-05 40.5 10.7 98 89-191 128-227 (1134)
261 2w2u_A Hypothetical P60 katani 86.1 1.8 6.2E-05 28.3 5.4 20 61-80 32-51 (83)
262 2v6x_A Vacuolar protein sortin 85.6 2.8 9.6E-05 27.3 6.3 19 61-79 26-44 (85)
263 1wfd_A Hypothetical protein 15 85.6 2.8 9.7E-05 27.9 6.3 20 61-80 28-47 (93)
264 2cpt_A SKD1 protein, vacuolar 85.4 1.5 5.3E-05 30.7 5.1 20 61-80 31-50 (117)
265 4fhn_B Nucleoporin NUP120; pro 85.1 5.8 0.0002 38.6 10.7 100 53-153 846-963 (1139)
266 2cpt_A SKD1 protein, vacuolar 84.5 7.6 0.00026 27.0 8.4 37 5-41 14-50 (117)
267 3t5v_B Nuclear mRNA export pro 84.3 7.6 0.00026 33.8 10.1 131 53-191 180-321 (455)
268 2v6y_A AAA family ATPase, P60 84.2 3.3 0.00011 27.0 6.0 20 61-80 24-43 (83)
269 2w2u_A Hypothetical P60 katani 84.0 1.7 5.9E-05 28.4 4.5 21 100-120 31-51 (83)
270 3re2_A Predicted protein; meni 83.6 15 0.0005 31.1 10.8 102 24-126 230-334 (472)
271 3u84_A Menin; MLL, JUND, ledgf 83.2 18 0.00061 31.2 11.4 105 25-131 253-361 (550)
272 4a5x_A MITD1, MIT domain-conta 83.0 3.2 0.00011 27.2 5.6 18 62-79 30-47 (86)
273 2v6x_A Vacuolar protein sortin 83.0 2.6 8.9E-05 27.5 5.2 21 100-120 25-45 (85)
274 4a5x_A MITD1, MIT domain-conta 82.6 2.8 9.5E-05 27.6 5.2 21 100-120 28-48 (86)
275 2v6y_A AAA family ATPase, P60 82.2 2.8 9.7E-05 27.3 5.1 21 100-120 23-43 (83)
276 2wm9_A Dedicator of cytokinesi 81.2 14 0.00048 31.8 10.5 110 9-118 11-138 (428)
277 4b4t_O 26S proteasome regulato 81.0 24 0.00083 29.8 12.8 182 29-213 59-264 (393)
278 4gq4_A Menin; tumor suppressor 78.9 18 0.00063 31.0 10.1 101 24-125 237-340 (489)
279 4gns_B Protein CSD3, chitin bi 77.2 8.3 0.00028 35.8 8.2 52 56-113 344-396 (754)
280 1y8m_A FIS1; mitochondria, unk 75.7 20 0.00069 25.9 13.0 79 48-135 38-120 (144)
281 1zb1_A BRO1 protein; AIP1, BRO 75.4 24 0.00082 29.8 10.2 37 5-41 119-161 (392)
282 2dl1_A Spartin; SPG20, MIT, st 72.6 5.5 0.00019 27.7 4.4 18 62-79 36-53 (116)
283 1wfd_A Hypothetical protein 15 71.8 19 0.00064 23.8 9.4 38 4-41 10-47 (93)
284 3r9m_A BRO1 domain-containing 71.5 44 0.0015 28.0 10.8 36 5-40 110-157 (376)
285 2wm9_A Dedicator of cytokinesi 69.2 34 0.0012 29.3 9.8 116 23-138 5-138 (428)
286 4gq2_M Nucleoporin NUP120; bet 68.1 46 0.0016 31.7 11.3 24 14-37 845-868 (950)
287 2yin_A DOCK2, dedicator of cyt 67.4 60 0.002 27.9 12.4 32 8-39 34-65 (436)
288 3kae_A CDC27, possible protein 67.0 39 0.0013 25.6 9.2 90 55-155 39-141 (242)
289 4gq2_M Nucleoporin NUP120; bet 66.3 43 0.0015 31.9 10.6 85 92-176 844-946 (950)
290 2cwy_A Hypothetical protein TT 65.1 11 0.00039 25.0 4.7 59 95-155 8-66 (94)
291 2ijq_A Hypothetical protein; s 63.2 12 0.00043 27.6 5.0 62 94-155 38-102 (161)
292 2rpa_A Katanin P60 ATPase-cont 62.8 8.8 0.0003 24.7 3.6 27 92-118 16-42 (78)
293 3ax2_A Mitochondrial import re 62.1 16 0.00055 23.1 4.7 24 15-38 23-46 (73)
294 3ax2_A Mitochondrial import re 61.5 7.4 0.00025 24.7 3.0 27 92-118 21-47 (73)
295 1om2_A Protein (mitochondrial 60.4 12 0.00042 25.0 4.1 27 92-118 24-50 (95)
296 1om2_A Protein (mitochondrial 57.0 27 0.00093 23.3 5.4 25 55-79 26-51 (95)
297 1qsa_A Protein (soluble lytic 49.4 1.5E+02 0.0051 26.7 14.4 119 22-155 227-346 (618)
298 1zbp_A Hypothetical protein VP 49.4 1E+02 0.0034 24.8 11.6 116 56-191 5-126 (273)
299 2dl1_A Spartin; SPG20, MIT, st 49.3 47 0.0016 23.0 5.7 43 24-79 18-60 (116)
300 3o10_A Sacsin; all-helical dom 49.0 33 0.0011 24.4 5.2 43 62-118 4-46 (141)
301 2oo2_A Hypothetical protein AF 48.4 17 0.00058 23.8 3.2 30 125-154 32-61 (86)
302 3rau_A Tyrosine-protein phosph 48.3 1.2E+02 0.004 25.3 13.5 37 5-41 113-158 (363)
303 2qx5_A Nucleoporin NIC96; mRNA 45.2 1.8E+02 0.0061 26.5 11.9 95 12-113 446-563 (661)
304 3eab_A Spastin; spastin, MIT, 45.0 23 0.00078 23.3 3.4 17 62-78 33-49 (89)
305 3kae_A CDC27, possible protein 44.4 1E+02 0.0034 23.3 12.2 99 94-203 39-153 (242)
306 2pmr_A Uncharacterized protein 44.0 65 0.0022 21.0 5.5 28 127-154 38-65 (87)
307 4ady_A RPN2, 26S proteasome re 43.9 2.2E+02 0.0076 27.2 13.0 140 5-155 372-517 (963)
308 2wb7_A PT26-6P; extra chromoso 43.6 1.7E+02 0.0058 25.7 10.2 15 27-41 450-464 (526)
309 2rpa_A Katanin P60 ATPase-cont 43.5 30 0.001 22.1 3.8 27 13-39 16-42 (78)
310 2br9_A 14-3-3E, 14-3-3 protein 40.6 1.3E+02 0.0044 23.5 7.8 53 65-118 147-203 (234)
311 2npm_A 14-3-3 domain containin 40.5 1.1E+02 0.0038 24.3 7.5 52 65-117 173-227 (260)
312 4gq4_A Menin; tumor suppressor 40.2 1.8E+02 0.0062 25.1 11.4 88 67-155 241-330 (489)
313 2xs1_A Programmed cell death 6 39.7 2.2E+02 0.0076 26.0 11.8 37 5-41 123-168 (704)
314 3t5v_B Nuclear mRNA export pro 39.7 59 0.002 28.2 6.2 74 83-157 171-249 (455)
315 2ijq_A Hypothetical protein; s 39.1 1.1E+02 0.0038 22.3 7.0 31 92-122 79-109 (161)
316 2br9_A 14-3-3E, 14-3-3 protein 39.0 1.1E+02 0.0037 23.9 7.1 53 26-78 147-203 (234)
317 2xze_A STAM-binding protein; h 37.5 69 0.0023 23.0 5.4 30 50-79 41-71 (146)
318 1o9d_A 14-3-3-like protein C; 37.1 1.6E+02 0.0053 23.4 7.8 51 65-116 152-206 (260)
319 2xze_A STAM-binding protein; h 37.0 62 0.0021 23.2 5.1 31 89-119 41-71 (146)
320 3efz_A 14-3-3 protein; 14-3-3, 36.0 1.3E+02 0.0046 24.0 7.3 52 26-77 169-226 (268)
321 1zb1_A BRO1 protein; AIP1, BRO 35.5 2E+02 0.0067 24.1 12.7 50 106-155 217-284 (392)
322 3iqu_A 14-3-3 protein sigma; s 34.9 1.6E+02 0.0055 23.0 7.6 51 26-76 150-204 (236)
323 1o9d_A 14-3-3-like protein C; 34.0 1.4E+02 0.0048 23.7 7.1 52 26-77 152-207 (260)
324 2wb7_A PT26-6P; extra chromoso 33.9 2.4E+02 0.0081 24.8 8.9 18 65-82 449-466 (526)
325 2cwy_A Hypothetical protein TT 33.1 1E+02 0.0035 20.2 5.3 32 89-122 42-73 (94)
326 3re2_A Predicted protein; meni 33.0 2.2E+02 0.0077 24.1 11.5 85 70-155 237-323 (472)
327 3c3r_A Programmed cell death 6 32.2 2.2E+02 0.0075 23.7 12.8 36 5-40 138-182 (380)
328 1wy6_A Hypothetical protein ST 31.4 1.5E+02 0.0051 21.5 7.1 117 22-155 20-152 (172)
329 3uzd_A 14-3-3 protein gamma; s 30.5 2E+02 0.0068 22.6 7.8 53 65-118 148-204 (248)
330 3eab_A Spastin; spastin, MIT, 30.3 25 0.00084 23.2 1.7 43 23-77 11-55 (89)
331 3snx_A SUSD homolog, putative 29.7 1.2E+02 0.0042 25.9 6.7 34 124-157 187-220 (460)
332 3efz_A 14-3-3 protein; 14-3-3, 29.4 1.9E+02 0.0066 23.0 7.2 52 65-117 169-226 (268)
333 3ubw_A 14-3-3E, 14-3-3 protein 29.0 2.2E+02 0.0074 22.6 7.5 51 26-76 173-227 (261)
334 3uzd_A 14-3-3 protein gamma; s 28.9 2.1E+02 0.0073 22.5 7.5 53 26-78 148-204 (248)
335 3ubw_A 14-3-3E, 14-3-3 protein 28.3 2.2E+02 0.0076 22.6 7.6 52 65-117 173-228 (261)
336 1zbp_A Hypothetical protein VP 28.1 1.5E+02 0.005 23.8 6.3 53 98-156 7-59 (273)
337 4a1g_A Mitotic checkpoint seri 28.1 1.7E+02 0.0058 21.1 8.6 117 27-156 8-129 (152)
338 2npm_A 14-3-3 domain containin 28.0 1.8E+02 0.0062 23.1 6.8 54 26-79 173-229 (260)
339 4ady_A RPN2, 26S proteasome re 27.0 4.2E+02 0.014 25.3 16.1 42 109-155 216-257 (963)
340 3r9m_A BRO1 domain-containing 26.6 2.4E+02 0.0081 23.5 7.7 47 66-117 217-263 (376)
341 4aez_C MAD3, mitotic spindle c 26.2 2.3E+02 0.0077 21.9 10.3 121 25-156 51-178 (223)
342 2e2a_A Protein (enzyme IIA); h 25.4 1.6E+02 0.0054 19.8 5.6 18 21-38 32-49 (105)
343 3t5x_A PCI domain-containing p 24.9 2.2E+02 0.0075 21.3 6.7 35 48-82 13-48 (203)
344 2ymb_A MITD1, MIT domain-conta 24.7 16 0.00053 29.2 0.0 34 48-81 22-56 (257)
345 3myv_A SUSD superfamily protei 24.6 1.2E+02 0.004 25.9 5.6 52 65-117 165-219 (454)
346 3lew_A SUSD-like carbohydrate 24.5 1.4E+02 0.0049 25.8 6.2 32 125-156 200-231 (495)
347 3kez_A Putative sugar binding 23.6 1.5E+02 0.005 25.4 6.0 52 65-117 171-225 (461)
348 2r17_C Vacuolar protein sortin 23.5 2.9E+02 0.01 22.3 18.4 119 7-125 97-232 (298)
349 1wcr_A PTS system, N, N'-diace 23.1 1.7E+02 0.006 19.5 5.8 23 17-39 26-48 (103)
350 3snx_A SUSD homolog, putative 22.8 1.3E+02 0.0044 25.8 5.5 51 65-116 161-219 (460)
351 3myv_A SUSD superfamily protei 22.4 1.6E+02 0.0056 25.0 6.1 31 125-155 187-217 (454)
352 3kez_A Putative sugar binding 22.4 1.6E+02 0.0056 25.0 6.1 33 124-156 192-224 (461)
353 2ymb_A MITD1, MIT domain-conta 22.1 19 0.00064 28.8 0.0 34 9-42 23-56 (257)
354 3lew_A SUSD-like carbohydrate 21.9 1.5E+02 0.0051 25.6 5.8 52 65-117 175-232 (495)
355 3l8r_A PTCA, putative PTS syst 21.8 2E+02 0.007 19.8 5.6 15 62-76 51-65 (120)
356 3rau_A Tyrosine-protein phosph 21.2 2.4E+02 0.0081 23.4 6.7 14 66-79 211-224 (363)
357 2o8p_A 14-3-3 domain containin 21.1 2.9E+02 0.01 21.4 11.2 57 22-78 138-198 (227)
358 3k1s_A PTS system, cellobiose- 20.5 2.1E+02 0.0071 19.4 5.8 20 20-39 33-52 (109)
359 2wvi_A Mitotic checkpoint seri 20.2 2.6E+02 0.0089 20.4 7.6 78 68-156 43-124 (164)
No 1
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.97 E-value=7.5e-30 Score=214.46 Aligned_cols=209 Identities=26% Similarity=0.369 Sum_probs=193.9
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhc
Q 026767 2 LSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 2 ~~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~g~~~~A~~~~~~Al~~~~~~ 81 (233)
++++..++.+|.++|.+|..+|++++|+.+|++|+.++...|++...+.++.++|.+|..|++++|+.+|++|+++++..
T Consensus 69 ~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~~~~ 148 (307)
T 2ifu_A 69 NRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENE 148 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCC
Q 026767 82 DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFL 161 (233)
Q Consensus 82 g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~ 161 (233)
++....+.++.++|.++..+|+|++|+.+|++++.+..+.+..+..+.+++++|.+++.+|++++|+.+|++++..+.+.
T Consensus 149 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~p~~~ 228 (307)
T 2ifu_A 149 ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPGFS 228 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTST
T ss_pred CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCCCC
Confidence 99888889999999999999999999999999999998888777777889999999999999999999999999445677
Q ss_pred CchHHHHHHHHHHHHhcCCHHHHHHHHhhc-ccccchHHHHHHhccCCCCc
Q 026767 162 RSDQNRCATKLISAYTEGDVEEIKRVAQSS-AISNLDHVIIKLARKLPTGD 211 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~-~~~~ld~~~~~l~~~l~~~~ 211 (233)
.+.++..+..++.++..||.+.+.. +.++ .+..||+|..+++.+++.++
T Consensus 229 ~~~e~~~l~~l~~~~~~~d~~~~~~-~~~~~~~~~ld~~~~~~~~~l~~~~ 278 (307)
T 2ifu_A 229 GSEDCAALEDLLQAYDEQDEEQLLR-VCRSPLVTYMDNDYAKLAISLKVPG 278 (307)
T ss_dssp TSHHHHHHHHHHHHHHTTCHHHHHH-HTTSHHHHTSCHHHHHHHHTCCCC-
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHH-HHhCchhhhhhHHHHHHHHhCCCCC
Confidence 8899999999999999999999999 5557 88899999999999986653
No 2
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.95 E-value=1.3e-26 Score=193.34 Aligned_cols=207 Identities=17% Similarity=0.143 Sum_probs=162.4
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-CCHHHHHHHHHHHHHHHH
Q 026767 2 LSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-AVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 2 ~~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-g~~~~A~~~~~~Al~~~~ 79 (233)
++++.+.+.+|.++|.+|..+|++++|+.+|++|+.++...|++...+.++.++|.+|. . |++++|+.+|++|+++++
T Consensus 70 ~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 70 AGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYA 149 (292)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 35677788888888888888888888888888888888888888888888888888888 6 888888888888888888
Q ss_pred hcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc-chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc-C
Q 026767 80 EDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT-NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ-V 157 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~-~ 157 (233)
..++....+.++.++|.++..+|+|++|+.+|++++.+....+.. +....++.++|.|+..+|++++|+.+|++++. .
T Consensus 150 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 229 (292)
T 1qqe_A 150 QDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSED 229 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-
T ss_pred hCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 888777777788888888888888888888888888775544433 24455778888888888999999999988885 4
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCHHHHHHHHhhc-ccccchHHHHHHhccCC
Q 026767 158 DAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSS-AISNLDHVIIKLARKLP 208 (233)
Q Consensus 158 ~~~~~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~-~~~~ld~~~~~l~~~l~ 208 (233)
+.+....++..+..|+.++..+|.+.+.+++..+ .+..+++|...+..+++
T Consensus 230 p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~~~~~~~~k 281 (292)
T 1qqe_A 230 PNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIK 281 (292)
T ss_dssp --------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHHHHHHHHHH
Confidence 5566677788888888888778888888888888 67778888776666543
No 3
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.93 E-value=1.3e-23 Score=175.23 Aligned_cols=187 Identities=12% Similarity=0.075 Sum_probs=172.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+..++..|..+|.+|...|++++|+.+|++|+.++.+.|++...+.++.++|.+|. .|++++|+.+|++|+++++..|+
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 66788999999999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-CC
Q 026767 84 EQMAFDLYRAATNVYIKL-EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-FL 161 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~~ 161 (233)
...++.++.++|.+|... |++++|+.+|++++.+....+.....+.++.++|.++..+|++++|+.+|++++.+.. ..
T Consensus 113 ~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 113 FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999996 9999999999999999988777777788899999999999999999999999995543 22
Q ss_pred --CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 162 --RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 162 --~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.......+..+|.++ ..||++.|..+++++
T Consensus 193 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 225 (292)
T 1qqe_A 193 LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEG 225 (292)
T ss_dssp TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGG
T ss_pred cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 235566888899988 799999999999999
No 4
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.92 E-value=3.5e-23 Score=173.67 Aligned_cols=189 Identities=13% Similarity=0.061 Sum_probs=173.6
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~ 81 (233)
+++..++..|..+|.+|+..|++++|+.+|.+|+.++.+.|++..++.++.++|.+|. .|++++|+.+|++|+++++..
T Consensus 30 ~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~ 109 (307)
T 2ifu_A 30 PDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN 109 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc
Confidence 6788899999999999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-C
Q 026767 82 DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-F 160 (233)
Q Consensus 82 g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~ 160 (233)
|+....+.++.++|.+|.. |++++|+.+|++++.++...++....+.++.++|.++..+|++++|+.+|++++.+.. .
T Consensus 110 g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 110 GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 9999889999999999999 9999999999999999998888888889999999999999999999999999985432 2
Q ss_pred -CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhcc
Q 026767 161 -LRSDQNRCATKLISAY-TEGDVEEIKRVAQSSA 192 (233)
Q Consensus 161 -~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~~ 192 (233)
........+..++.++ ..||++.|..++++++
T Consensus 189 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 189 ENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 2334566778888887 7899999999999975
No 5
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.88 E-value=9.3e-21 Score=163.08 Aligned_cols=203 Identities=14% Similarity=0.072 Sum_probs=183.5
Q ss_pred CChHHHHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCH
Q 026767 3 SSPWDAAKHMESAAALAKELHN-----------------WREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVP 64 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~-----------------~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~ 64 (233)
++....+.++.++|.+|...|+ +++|+.+|++++.++...++....+.++.++|.++. .|++
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 239 (411)
T 4a1s_A 160 GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDF 239 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh
Confidence 4566788899999999999999 999999999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCH
Q 026767 65 EDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~ 144 (233)
++|+.+|++++++.+..++....+.++.++|.++...|++++|+.+|++++.+....++....+.++..+|.++...|++
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 319 (411)
T 4a1s_A 240 QAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEF 319 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999999988888889999999999999999999999999999998888888899999999999999999
Q ss_pred HHHHHHHHHhhcCCC--CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc--ccccchHHHHHHhc
Q 026767 145 KQAEKCYNDCSQVDA--FLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS--AISNLDHVIIKLAR 205 (233)
Q Consensus 145 ~~A~~~~~~al~~~~--~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~--~~~~ld~~~~~l~~ 205 (233)
++|..+|++++.+.. ........++..++.++ ..|+.++|..+++++ ++..++........
T Consensus 320 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 385 (411)
T 4a1s_A 320 NTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXXXXXXXXXXX 385 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhcccchhhhhh
Confidence 999999999985532 23456677899999998 899999999999999 78888775443333
No 6
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.88 E-value=3e-20 Score=159.54 Aligned_cols=189 Identities=16% Similarity=0.056 Sum_probs=148.3
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
++....+.++.++|.+|...|++++|+.++++|+.++...++ ....+.++.++|.+|. .|++++|+.+|++|+++++.
T Consensus 137 ~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 137 KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 566778888899999998899999999999999999988887 7788888999999988 79999999999999999988
Q ss_pred cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCC
Q 026767 81 DDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 160 (233)
Q Consensus 81 ~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~ 160 (233)
.++....+.++.++|.+|..+|++++|+.+|++++.+++..++.+..+.++.++|.++..+|++++|..++++++.+...
T Consensus 217 ~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 217 EKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999888887775666888889999999999999999999888754321
Q ss_pred -CCchHHHHHHHHHHHH-hcCC---HHHHHHHHhhc
Q 026767 161 -LRSDQNRCATKLISAY-TEGD---VEEIKRVAQSS 191 (233)
Q Consensus 161 -~~~~e~~~l~~L~~a~-~~gd---~~~a~~~~~~~ 191 (233)
....-...+..|+..+ ..|+ ...+...+++.
T Consensus 297 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 332 (383)
T 3ulq_A 297 AGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK 332 (383)
T ss_dssp HTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 1111112245566666 5666 44444444333
No 7
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.88 E-value=3e-20 Score=138.33 Aligned_cols=157 Identities=15% Similarity=0.091 Sum_probs=148.3
Q ss_pred CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHH
Q 026767 1 MLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 1 ~~~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~ 79 (233)
+.+++...+.++..+|.+|...|++++|+.++++++.+....++....+.++.++|.++. .|++++|+.+|++++++++
T Consensus 1 ~~~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 1 GPGSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp ---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 80 EDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
..++....+.++.++|.++...|++++|+.++++++.+....++....+.++..+|.++...|++++|..++++++.+
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 81 QLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 999988888999999999999999999999999999999998888888999999999999999999999999999744
No 8
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.87 E-value=2e-20 Score=145.74 Aligned_cols=173 Identities=11% Similarity=0.015 Sum_probs=155.8
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~ 81 (233)
+++...+.++..+|.+|...|++++|+.+|++++.+++..|+....+.++.++|.++. .|++++|+.++++++++++..
T Consensus 20 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 99 (203)
T 3gw4_A 20 AHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL 99 (203)
T ss_dssp TSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred CChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 3455678899999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred C-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-
Q 026767 82 D-KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA- 159 (233)
Q Consensus 82 g-~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~- 159 (233)
+ +....+.++.++|.++...|++++|+.++++++.+.+..++....+.++.++|.++...|++++|..++++++.+..
T Consensus 100 ~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 100 PEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 9 55577789999999999999999999999999999999999888899999999999999999999999999985543
Q ss_pred -CCCchHHHHHHHHHHH
Q 026767 160 -FLRSDQNRCATKLISA 175 (233)
Q Consensus 160 -~~~~~e~~~l~~L~~a 175 (233)
.....++.++..++..
T Consensus 180 ~~~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 180 LEDSEAVNELMTRLNGL 196 (203)
T ss_dssp TTCHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHhcccch
Confidence 2345666677766654
No 9
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.87 E-value=1.6e-19 Score=155.03 Aligned_cols=154 Identities=10% Similarity=-0.035 Sum_probs=116.5
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
++....+.++.++|.+|...|++++|+.++++|+.++...++ ....+.++.++|.++. .|++++|+++|++|+++++.
T Consensus 135 ~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 214 (378)
T 3q15_A 135 SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMD 214 (378)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777777777777777777777766 4467777777777777 67777777777777777777
Q ss_pred cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 81 DDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 81 ~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
.++....+.++.++|.+|..+|++++|+.+|++++.+++..+++.. +.++.++|.++..+|++++|..++++++.+
T Consensus 215 ~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 215 IQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 7777777777777777777777777777777777777776666655 677777777777777777777777777744
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.87 E-value=2.7e-20 Score=159.81 Aligned_cols=178 Identities=8% Similarity=0.045 Sum_probs=166.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 026767 14 SAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK-EQMAFDLY 91 (233)
Q Consensus 14 ~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~-~~~~~~~l 91 (233)
..|.++...|++++|+.+|++|+.++...++....+.++.++|.+|. .|++++|+.+|.+|+++++..++ ....+.++
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 48899999999999999999999999999999999999999999999 89999999999999999999987 77778899
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-CCC-chHHHHH
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-FLR-SDQNRCA 169 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~~~-~~e~~~l 169 (233)
.++|.++..+|+|++|+.+|++++.+..+.++....+.++.++|.+|..+|++++|+.+|++++.+.. ... +....++
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999996533 233 5668899
Q ss_pred HHHHHHH-hcCCHHHHHHHHhhc
Q 026767 170 TKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 170 ~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..||.++ ..|+++.|...++++
T Consensus 268 ~~l~~~~~~~g~~~~A~~~~~~a 290 (383)
T 3ulq_A 268 FLITQIHYKLGKIDKAHEYHSKG 290 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999999 899999999999998
No 11
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.86 E-value=6.1e-20 Score=157.63 Aligned_cols=181 Identities=11% Similarity=0.029 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC-hHHHH
Q 026767 11 HMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK-EQMAF 88 (233)
Q Consensus 11 ~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~-~~~~~ 88 (233)
.+...|..+...|++++|+.+|++|+.+....++....+.++.++|.+|. .|++++|+.++++|+++++..++ ....+
T Consensus 103 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 182 (378)
T 3q15_A 103 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTI 182 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHH
Confidence 46677889999999999999999999999999999999999999999999 89999999999999999999886 55677
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-CCCchHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-FLRSDQNR 167 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~~~~~e~~ 167 (233)
.++.++|.++..+|+|++|+++|++++.++++.++....+.++.++|.+|..+|++++|+.+|++++.+.. ...+....
T Consensus 183 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 262 (378)
T 3q15_A 183 QSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPK 262 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999986543 22333488
Q ss_pred HHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 168 CATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 168 ~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++..|+.++ ..|+.+.|...++++
T Consensus 263 ~~~~la~~~~~~g~~~~A~~~~~~a 287 (378)
T 3q15_A 263 VLFGLSWTLCKAGQTQKAFQFIEEG 287 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 999999999 899999999999998
No 12
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.1e-19 Score=152.30 Aligned_cols=194 Identities=15% Similarity=0.164 Sum_probs=176.7
Q ss_pred CChHHHHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h
Q 026767 3 SSPWDAAKHMESAAALAKELHN--------------------WREVADFYRKASELYNECGRSQPASDALAKAARALE-D 61 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~--------------------~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~ 61 (233)
+++...+.++.++|.+|...|+ +++|+.+|++++.++...++....+.++.++|.++. .
T Consensus 121 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 121 NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLL 200 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHc
Confidence 3456678899999999999999 999999999999999999999999999999999999 8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA 141 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~ 141 (233)
|++++|+.+|++++++.+..++....+.++.++|.++...|++++|+.+|++++.+....++....+.++..+|.++...
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988888899999999999999999999999999999999888888899999999999999
Q ss_pred CCHHHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc--ccccc
Q 026767 142 NDFKQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS--AISNL 196 (233)
Q Consensus 142 gd~~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~--~~~~l 196 (233)
|++++|..+|++++.+.. . .......++..++.++ ..|+++.|..+++++ +...+
T Consensus 281 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 281 QDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999985532 2 3456677899999998 899999999999998 44444
No 13
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.84 E-value=3.9e-19 Score=147.00 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=174.4
Q ss_pred CChHHHHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h
Q 026767 3 SSPWDAAKHMESAAALAKELHN--------------------WREVADFYRKASELYNECGRSQPASDALAKAARALE-D 61 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~--------------------~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~ 61 (233)
+++...+.++.++|.+|...|+ +++|+.++++++.+....++....+.++.++|.++. .
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 196 (338)
T 3ro2_A 117 NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLL 196 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 4566678899999999999999 999999999999999999999999999999999999 8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA 141 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~ 141 (233)
|++++|+.++++++++.+..++....+.++.++|.++...|++++|+.++++++.+....++....+.++..+|.++...
T Consensus 197 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 276 (338)
T 3ro2_A 197 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 276 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988888899999999999999999999999999999999888888899999999999999
Q ss_pred CCHHHHHHHHHHhhcCCC--CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc--cccc
Q 026767 142 NDFKQAEKCYNDCSQVDA--FLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS--AISN 195 (233)
Q Consensus 142 gd~~~A~~~~~~al~~~~--~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~--~~~~ 195 (233)
|++++|..++++++.+.. ........++..++.++ ..|+++.|..+++++ +...
T Consensus 277 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 277 QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 999999999999985432 23456677888999998 899999999999988 4443
No 14
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.84 E-value=5.7e-19 Score=150.71 Aligned_cols=189 Identities=15% Similarity=0.151 Sum_probs=148.4
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC------------------
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV------------------ 63 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~------------------ 63 (233)
++....+.++.++|.+|...|++++|+.++++++.++...++....+.++.++|.++. .|+
T Consensus 81 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~ 160 (406)
T 3sf4_A 81 GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVR 160 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHH
T ss_pred cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHH
Confidence 4456667778888888888888888888888888888888887778888888888888 688
Q ss_pred --HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh
Q 026767 64 --PEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA 141 (233)
Q Consensus 64 --~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~ 141 (233)
+++|+.+|++++.+++..++....+.++.++|.++...|++++|+.+|++++.+....++....+.++.++|.++...
T Consensus 161 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 240 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL 240 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Confidence 888888888888888888777777778888888888888888888888888888877777777777888888888888
Q ss_pred CCHHHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 142 NDFKQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 142 gd~~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|++++|..+|++++.+.. . .......++..++.++ ..|+++.|...++++
T Consensus 241 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 293 (406)
T 3sf4_A 241 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 293 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 888888888888874422 2 2344566777888877 788888888888777
No 15
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.84 E-value=6.8e-19 Score=151.36 Aligned_cols=189 Identities=12% Similarity=0.104 Sum_probs=151.6
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC-----------------H
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-----------------P 64 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-----------------~ 64 (233)
++....+.++..+|.+|...|++++|+.+|++++.++...++....+.++.++|.++. .|+ +
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 4456677788888888888888888888888888888888887788888888888888 688 8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCH
Q 026767 65 EDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~ 144 (233)
++|+.+|++++++.+..++....+.++.++|.++...|++++|+.+|++++.+....++....+.++..+|.++...|++
T Consensus 200 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 279 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQF 279 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCH
Confidence 88888888888888888777777778888888888888888888888888888877777777777888888888888888
Q ss_pred HHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 145 KQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 145 ~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++|..+|++++.+.. . .......++..++.++ ..|+++.|..+++++
T Consensus 280 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 329 (411)
T 4a1s_A 280 EDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRH 329 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 888888888874432 2 2345567788888888 788888888888877
No 16
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.84 E-value=1.4e-18 Score=140.76 Aligned_cols=188 Identities=13% Similarity=0.088 Sum_probs=163.0
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNEC--GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~--g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
+....+.++..+|.+|...|++++|+.+|++++.++.+. ++....+.++.++|.++. .|++++|+.+|++++.+++.
T Consensus 38 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 38 DHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 117 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999988 888889999999999999 89999999999999999987
Q ss_pred cC--ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 81 DD--KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 81 ~g--~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
.+ +......++.++|.++...|++++|+.+|++++.++... ++.+..+.++.++|.++..+|++++|..+|++++.
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 197 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 197 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 63 234556799999999999999999999999999997765 33556678899999999999999999999999984
Q ss_pred CC-C--------------------------------------------CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhh
Q 026767 157 VD-A--------------------------------------------FLRSDQNRCATKLISAY-TEGDVEEIKRVAQS 190 (233)
Q Consensus 157 ~~-~--------------------------------------------~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~ 190 (233)
+. . ........++..|+.++ ..|++++|...+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 277 (283)
T 3edt_B 198 RAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDC 277 (283)
T ss_dssp HHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 31 0 02245566888999998 79999999999987
Q ss_pred c
Q 026767 191 S 191 (233)
Q Consensus 191 ~ 191 (233)
+
T Consensus 278 a 278 (283)
T 3edt_B 278 A 278 (283)
T ss_dssp H
T ss_pred H
Confidence 7
No 17
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.83 E-value=1.7e-18 Score=143.10 Aligned_cols=187 Identities=16% Similarity=0.154 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC--------------------
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-------------------- 63 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-------------------- 63 (233)
....+.++..+|.+|...|++++|+.++++++.+....++....+.++.++|.++. .|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 33445555555555555555555555555555555555555555555555555555 455
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC
Q 026767 64 PEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAND 143 (233)
Q Consensus 64 ~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd 143 (233)
+++|+.++++++.+.+..++....+.++.++|.++...|++++|+.++++++.+....++....+.++..+|.++...|+
T Consensus 159 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 238 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE 238 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC
Confidence 55555555555555555555555555555555555555666666666665555555555555555555666666666666
Q ss_pred HHHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 144 FKQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 144 ~~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+++|..++++++.+.. . .......++..++.++ ..|+++.|...++++
T Consensus 239 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 289 (338)
T 3ro2_A 239 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 289 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 6666666665553211 1 1233344555555555 556666666665555
No 18
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.82 E-value=3.5e-18 Score=140.64 Aligned_cols=188 Identities=14% Similarity=0.130 Sum_probs=165.1
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNEC--GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~--g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
+....+.++..+|.+|...|++++|+.+|++++.++.+. ++....+.++.++|.++. .|++++|+.+|++++++++.
T Consensus 64 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999999999999999999988 888889999999999999 89999999999999999987
Q ss_pred c--CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 81 D--DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 81 ~--g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
. ++......++.++|.++...|++++|+.+|++++.++.+. ++.+....++..+|.++...|++++|..+|++++.
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6 5555667899999999999999999999999999998776 44666778899999999999999999999999984
Q ss_pred CC-C--------------------------------------------CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhh
Q 026767 157 VD-A--------------------------------------------FLRSDQNRCATKLISAY-TEGDVEEIKRVAQS 190 (233)
Q Consensus 157 ~~-~--------------------------------------------~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~ 190 (233)
.. . ........++..++.++ ..|++++|...+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 303 (311)
T 3nf1_A 224 RAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEA 303 (311)
T ss_dssp HHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 21 0 02355677889999999 89999999999988
Q ss_pred c
Q 026767 191 S 191 (233)
Q Consensus 191 ~ 191 (233)
+
T Consensus 304 a 304 (311)
T 3nf1_A 304 A 304 (311)
T ss_dssp H
T ss_pred H
Confidence 7
No 19
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.82 E-value=2.4e-18 Score=141.69 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=167.4
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
+....+.++..+|.+|...|++++|+.+|++++.++...+ +....+.++..+|.++. .|++++|+.+|++++.+++.
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999887 67788999999999999 89999999999999999988
Q ss_pred c--CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 81 D--DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 81 ~--g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
. ++......++.++|.++...|++++|+.+|++++.+.... ++......++.++|.++...|++.+|+.+|++++.
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 7 5555667899999999999999999999999999998776 66677788899999999999999999999999985
Q ss_pred CCC----CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 157 VDA----FLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 157 ~~~----~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+.. ........++..++.++ ..|++++|...++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 221 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEI 221 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 421 23456677899999988 899999999999988
No 20
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.79 E-value=2.1e-17 Score=128.40 Aligned_cols=173 Identities=10% Similarity=-0.019 Sum_probs=148.1
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI 99 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~ 99 (233)
..|++++|...++.. .+++...+.++..+|.++. .|++++|+.+|++++++++..++....+.++.++|.++.
T Consensus 4 ~~g~~~~A~~~~~~~------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 77 (203)
T 3gw4_A 4 EAHDYALAERQAQAL------LAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER 77 (203)
T ss_dssp ---CHHHHHHHHHHH------HTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 468899998854433 4577788999999999999 899999999999999999999998888899999999999
Q ss_pred HhccHHHHHHHHHHHHHHHhHccC-cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH
Q 026767 100 KLEKYADAATFLLRWGLAADKCNA-TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY 176 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~~~~-~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~ 176 (233)
..|++++|+.++++++.+++..++ +...+.++.++|.++...|++++|..++++++.+.. . .....+.++..++.++
T Consensus 78 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 157 (203)
T 3gw4_A 78 MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLA 157 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 999999999999999999998884 447888999999999999999999999999985532 2 3345677889999988
Q ss_pred -hcCCHHHHHHHHhhc--ccccchHH
Q 026767 177 -TEGDVEEIKRVAQSS--AISNLDHV 199 (233)
Q Consensus 177 -~~gd~~~a~~~~~~~--~~~~ld~~ 199 (233)
..|++++|..+++++ +++.+++.
T Consensus 158 ~~~g~~~~A~~~~~~al~~~~~~~~~ 183 (203)
T 3gw4_A 158 QQEKNLLEAQQHWLRARDIFAELEDS 183 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 899999999999999 66666543
No 21
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.79 E-value=1e-17 Score=139.16 Aligned_cols=181 Identities=7% Similarity=-0.056 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q 026767 11 HMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFD 89 (233)
Q Consensus 11 ~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~ 89 (233)
.+.+.+..+...|++++|..++++++.......+....+..+..+|.++. .+++++|+.+|++|+++....++....+.
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHH
Confidence 33333444444455555555555555444443443444444444555544 34555555555555554444444444444
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc-cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-C-CCchHH
Q 026767 90 LYRAATNVYIKLEKYADAATFLLRWGLAADKC-NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-F-LRSDQN 166 (233)
Q Consensus 90 ~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~-~~~~e~ 166 (233)
+++++|.+|..+|+|++|+.+|++++.++... ++....+.++.++|.+|..+|++++|+.++++++.+.. . .....+
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~ 236 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIG 236 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 45555555555555555555555555544444 44444455555555555555555555555555543221 1 123334
Q ss_pred HHHHHHHHHH-hcC-CHHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEG-DVEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~g-d~~~a~~~~~~~ 191 (233)
.++..+|.++ ..| +.++|..+++++
T Consensus 237 ~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 237 QLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 4444555544 344 234555554444
No 22
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.78 E-value=1.1e-16 Score=136.31 Aligned_cols=187 Identities=10% Similarity=-0.006 Sum_probs=151.2
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g 82 (233)
++...+.++..+|.+|...|++++|..++++|+.+....|++...+.++.++|.++. .|++++|+.+|++++++.+..+
T Consensus 48 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~ 127 (373)
T 1hz4_A 48 WFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQH 127 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhc
Confidence 344567788899999999999999999999999999999999889999999999999 7999999999999999999877
Q ss_pred Ch--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC-C
Q 026767 83 KE--QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD-A 159 (233)
Q Consensus 83 ~~--~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~-~ 159 (233)
.. .....++.++|.++...|++++|..++++++.+....+... ...++..+|.++...|++++|..++++++.+. .
T Consensus 128 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 128 LEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ-QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp CTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG-GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred cccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 64 44566888999999999999999999999999887766554 55778899999999999999999999987442 2
Q ss_pred CCCchHHHHH--HHHHHHH-hcCCHHHHHHHHhhc
Q 026767 160 FLRSDQNRCA--TKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 160 ~~~~~e~~~l--~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.......... ..++..+ ..|+.+.|...++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 241 (373)
T 1hz4_A 207 GKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHT 241 (373)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 2111111111 2333445 789999999998887
No 23
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.77 E-value=1.5e-17 Score=138.10 Aligned_cols=191 Identities=7% Similarity=-0.081 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
....+.+.+..+...|++++|+.++.+++.......+.......+..+|.++. .|++++|+.+|++|+++.....+...
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 153 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQ 153 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHH
Confidence 34556677788888999999999999999876544444456667778999988 79999999999999999888777777
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHH-HhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC--CCCc
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQC-KAYLSAIIVYLYANDFKQAEKCYNDCSQVDA--FLRS 163 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a-~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~--~~~~ 163 (233)
.+.+++++|.+|..+|+|++|+.+|++++.++...+...... .++.++|.+|..+|++++|+.++++++.+.. ....
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 778999999999999999999999999999988776554433 7899999999999999999999999985432 2334
Q ss_pred hHHHHHHHHHHHH-hcCCHHHH-HHHHhhc--ccccchH
Q 026767 164 DQNRCATKLISAY-TEGDVEEI-KRVAQSS--AISNLDH 198 (233)
Q Consensus 164 ~e~~~l~~L~~a~-~~gd~~~a-~~~~~~~--~~~~ld~ 198 (233)
..+.++..+|.++ ..|+.+.| ..+++++ ++..++.
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~ 272 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEM 272 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCc
Confidence 5688899999998 79999999 8878887 5555544
No 24
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.77 E-value=1.1e-16 Score=136.29 Aligned_cols=186 Identities=13% Similarity=-0.006 Sum_probs=162.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+...+..+...|.++...|++++|+.++++++... ..+++...+.++..+|.++. .|++++|+.++++++.+.+..++
T Consensus 10 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (373)
T 1hz4_A 10 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV 88 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc
Confidence 45567788889999999999999999999999877 34455567788999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc--chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-C
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT--NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-F 160 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~ 160 (233)
......++.++|.++...|++++|+.+|++++.+....+.. +..+.++.++|.++...|++++|..++++++.+.. .
T Consensus 89 ~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 89 WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 88888899999999999999999999999999999887765 56777889999999999999999999999985433 3
Q ss_pred CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 161 LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 161 ~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
........+..++.++ ..|++++|...++++
T Consensus 169 ~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a 200 (373)
T 1hz4_A 169 QPQQQLQCLAMLIQCSLARGDLDNARSQLNRL 200 (373)
T ss_dssp CGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333556778889888 899999999999988
No 25
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.76 E-value=3.6e-17 Score=135.79 Aligned_cols=152 Identities=9% Similarity=-0.056 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH-
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ- 85 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~- 85 (233)
.+..+..+|.++...|++++|+.+|++|+.+.....+....+.++.++|.+|. .|++++|+.+|++|+++++..++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 44556778899999999999999999999998888888889999999999999 8999999999999999998876433
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHH-HHHHHHhhcCCC
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQA-EKCYNDCSQVDA 159 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A-~~~~~~al~~~~ 159 (233)
....++.++|.+|..+|+|++|+.+|++++.+....++....+.++.++|.++..+|++++| ..+|++++.+..
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 33379999999999999999999999999999988788888899999999999999999999 888999985543
No 26
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.76 E-value=6.4e-17 Score=130.92 Aligned_cols=172 Identities=14% Similarity=0.123 Sum_probs=150.2
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHH
Q 026767 20 KELHNWREVADFYRKASELYNECG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED--DKEQMAFDLYRAA 94 (233)
Q Consensus 20 ~~~g~~~eA~~~~~~A~~l~~~~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~--g~~~~~~~~l~~l 94 (233)
...|++++|+.+|++|+.++.+.. +....+.++..+|.++. .|++++|+.+|++++++++.. ++......++.++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 347899999999999999998864 55678999999999999 899999999999999999887 5556667899999
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHhHccC--cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC----CCCCchHHHH
Q 026767 95 TNVYIKLEKYADAATFLLRWGLAADKCNA--TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD----AFLRSDQNRC 168 (233)
Q Consensus 95 g~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~----~~~~~~e~~~ 168 (233)
|.++...|++++|+.+|++++.++++... .+....++.++|.++...|++++|..+|++++.+. .........+
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 171 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKT 171 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999999999999999999877633 35677889999999999999999999999998552 1234566788
Q ss_pred HHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 169 ATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 169 l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+..++.++ ..|+.+.|...++++
T Consensus 172 ~~~la~~~~~~g~~~~A~~~~~~~ 195 (283)
T 3edt_B 172 KNNLASCYLKQGKYQDAETLYKEI 195 (283)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999998 899999999999888
No 27
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.76 E-value=2.6e-17 Score=136.68 Aligned_cols=151 Identities=11% Similarity=-0.025 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-CChHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-DKEQM 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g~~~~ 86 (233)
+..+..+|.++...+++++|+.+|++|+.+....++....+.++.++|.+|. .|++++|+.+|++|+++++.. ++...
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 5566779999999999999999999999998888999899999999999999 899999999999999999999 78888
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhC-CHHHHHHHHHHhhcCCC
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAN-DFKQAEKCYNDCSQVDA 159 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g-d~~~A~~~~~~al~~~~ 159 (233)
.+.++.++|.+|..+|+|++|+.++++++.+..+.++....+.++.++|.++..+| ++++|.++|++++.+..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999999 57999999999986553
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.76 E-value=2.8e-17 Score=152.86 Aligned_cols=167 Identities=17% Similarity=0.145 Sum_probs=143.3
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~ 81 (233)
++...-+.+|.++|++|.++|++++|+.+|++|+++. + .-+.++.++|.+|. .|++++|+.+|++|+++.+..
T Consensus 3 gs~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~-----P-~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~ 76 (723)
T 4gyw_A 3 GSCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF-----P-EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 76 (723)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----S-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 3445678999999999999999999999999999984 2 34678999999999 899999999999999986542
Q ss_pred CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCC
Q 026767 82 DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFL 161 (233)
Q Consensus 82 g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~ 161 (233)
+.++.++|.++..+|++++|+++|++++++ .+..+.++.++|.++..+|++++|+.+|++++.+.
T Consensus 77 ------~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~--- 141 (723)
T 4gyw_A 77 ------ADAYSNMGNTLKEMQDVQGALQCYTRAIQI------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--- 141 (723)
T ss_dssp ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred ------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Confidence 468999999999999999999999999986 33446789999999999999999999999999543
Q ss_pred CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 162 RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.....++..|+.++ ..|+.+.|.+.++++
T Consensus 142 -P~~~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 142 -PDFPDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp -SCCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred -CCChHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 12366888999988 799999998888776
No 29
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.76 E-value=6.8e-17 Score=119.91 Aligned_cols=150 Identities=16% Similarity=0.149 Sum_probs=136.1
Q ss_pred cCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH
Q 026767 42 CGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 42 ~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 120 (233)
.|++...+.++..+|.++. .|++++|+.+|++++++.+..++....+.++.++|.++...|++++|+.++++++.+...
T Consensus 2 ~~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 2 PGSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999 899999999999999999999998888899999999999999999999999999999999
Q ss_pred ccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC-C-CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 121 CNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA-F-LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 121 ~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~-~-~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.++....+.++.++|.++...|++++|..++++++.+.. . .......++..++..+ ..|+++.|...++++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 155 (164)
T 3ro3_A 82 LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 155 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 888888899999999999999999999999999985432 2 3456677889999988 899999999999987
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.72 E-value=7.1e-16 Score=118.55 Aligned_cols=163 Identities=14% Similarity=0.143 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.+..|.++|.+|..+|++++|+.+|++|+++. | .-..++.++|.++. .|++++|+..+.+++...+..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~----- 72 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-----P-NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS----- 72 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC-----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh-----
Confidence 35789999999999999999999999999883 2 24678999999999 899999999999998776542
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~ 166 (233)
..++..+|.++...++++.|...+.+++.+. +....++..+|.++..+|++++|++.|++++.+. +...
T Consensus 73 -~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~----p~~~ 141 (184)
T 3vtx_A 73 -AEAYYILGSANFMIDEKQAAIDALQRAIALN------TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK----PGFI 141 (184)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc----chhh
Confidence 3578889999999999999999999998762 2334578999999999999999999999998543 1235
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhcc
Q 026767 167 RCATKLISAY-TEGDVEEIKRVAQSSA 192 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd~~~a~~~~~~~~ 192 (233)
.+...+|.++ ..|+.++|..++++++
T Consensus 142 ~~~~~lg~~~~~~g~~~~A~~~~~~al 168 (184)
T 3vtx_A 142 RAYQSIGLAYEGKGLRDEAVKYFKKAL 168 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 6888999999 8999999999999983
No 31
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.5e-15 Score=131.41 Aligned_cols=185 Identities=9% Similarity=0.041 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
...+++.++|.+|...|++++|+++|.+++.++...++......+...+|.++. .|++++|+.++++++.+....++..
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 345678999999999999999999999999999999998888899999999999 8999999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC-CC-CC-
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD-AF-LR- 162 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~-~~-~~- 162 (233)
..+.++.++|.+|...|+|.+|+.++++++..+...++....+.++..+|.+|...|++++|..++++++.+. .. +.
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 212 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPT 212 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCch
Confidence 7788999999999999999999999999999999988889999999999999999999999999999998443 22 22
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...+.+...+|..+ ..+++..|...+.++
T Consensus 213 ~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a 242 (434)
T 4b4t_Q 213 QTVAELDLMSGILHCEDKDYKTAFSYFFES 242 (434)
T ss_dssp HHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34567788888888 789999999888777
No 32
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.7e-15 Score=119.24 Aligned_cols=175 Identities=16% Similarity=0.093 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC-C
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD-K 83 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g-~ 83 (233)
...+..+..+|.++...|++++|+.+|++++.+. .+ ..++..+|.++. .|++++|+.+|++++++.+..+ +
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 74 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH---KD----ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRAD 74 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---CC----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh---cc----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccc
Confidence 3578899999999999999999999999999986 22 467899999999 7999999999999999999875 4
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH--------------------ccCcchHHHhHHHHHHHHHhhCC
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK--------------------CNATNSQCKAYLSAIIVYLYAND 143 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~--------------------~~~~~~~a~~~~~lg~~~~~~gd 143 (233)
......++..+|.++...|++++|+.+|++++.+... ....+....++..+|.++...|+
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 4445679999999999999999999999999984211 11345566788999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 144 FKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 144 ~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+++|..+|++++.... ....++..++.++ ..|+++.|...++++
T Consensus 155 ~~~A~~~~~~a~~~~~----~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 199 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAP----EDARGYSNRAAALAKLMSFPEAIADCNKA 199 (258)
T ss_dssp HHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCc----ccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999984431 1246778888888 789999999999988
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.70 E-value=7.2e-16 Score=122.71 Aligned_cols=160 Identities=14% Similarity=0.113 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+.++.++|.++...|++++|+.+|++++.+. | .-+.++.++|.++. .|++++|+.+|++++++.+..
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~------ 72 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKEN-----P-QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRY------ 72 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-----S-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------
Confidence 4688999999999999999999999998763 2 34678999999999 899999999999999987642
Q ss_pred HHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 88 FDLYRAATNVYIKL-----------EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 88 ~~~l~~lg~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
..++.++|.++... |++++|+..|++++.+ .+....++.++|.++..+|++++|+..|++++.
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 146 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV------NPRYAPLHLQRGLVYALLGERDKAEASLKQALA 146 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHh
Confidence 35789999999999 9999999999999976 234456789999999999999999999999986
Q ss_pred CCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 157 VDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 157 ~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+. ....+...++.++ ..|++++|...++++
T Consensus 147 ~~-----~~~~~~~~la~~~~~~g~~~~A~~~~~~a 177 (217)
T 2pl2_A 147 LE-----DTPEIRSALAELYLSMGRLDEALAQYAKA 177 (217)
T ss_dssp HC-----CCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cc-----cchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 55 1255677899988 899999999999998
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.1e-15 Score=118.98 Aligned_cols=173 Identities=13% Similarity=0.067 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-----
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECG-RSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED----- 81 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g-~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~----- 81 (233)
..++..+|.+|...|++++|+.++++++.+....+ +....+.++..+|.++. .|++++|+.+|++++.+.+..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 117 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTK 117 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHH
Confidence 46788899999999999999999999999998765 55556899999999999 899999999999999953220
Q ss_pred ---------------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHH
Q 026767 82 ---------------DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQ 146 (233)
Q Consensus 82 ---------------g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~ 146 (233)
........++..+|.++...|++++|+.+|++++.+.. ....++..+|.++...|++++
T Consensus 118 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~ 191 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP------EDARGYSNRAAALAKLMSFPE 191 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHH
T ss_pred HhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHhCCHHH
Confidence 01223346889999999999999999999999997632 234678999999999999999
Q ss_pred HHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 147 AEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 147 A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|...|++++.... ....++..++.++ ..|+.+.|...++++
T Consensus 192 A~~~~~~al~~~~----~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 233 (258)
T 3uq3_A 192 AIADCNKAIEKDP----NFVRAYIRKATAQIAVKEYASALETLDAA 233 (258)
T ss_dssp HHHHHHHHHHHCT----TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCH----HHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999985431 2356788899988 899999999999988
No 35
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.69 E-value=1.1e-15 Score=121.56 Aligned_cols=160 Identities=15% Similarity=0.015 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-----------CCHHHHHHHHHHHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-----------AVPEDAIQLYTDACI 76 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-----------g~~~~A~~~~~~Al~ 76 (233)
+.++.++|.++...|++++|+.+|++++.+. | .-..++.++|.++. . |++++|+..|+++++
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-----P-~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVART-----P-RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 5678899999999999999999999999884 2 34678899999999 8 999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 77 MLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 77 ~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+.+.. ..++.++|.++..+|++++|+..|++++.+. ....++.++|.++..+|++++|+..|++++.
T Consensus 113 ~~P~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 179 (217)
T 2pl2_A 113 VNPRY------APLHLQRGLVYALLGERDKAEASLKQALALE-------DTPEIRSALAELYLSMGRLDEALAQYAKALE 179 (217)
T ss_dssp HCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hCccc------HHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 86642 3578999999999999999999999999873 2345789999999999999999999999985
Q ss_pred CCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 157 VDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 157 ~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.. +....+...++.++ ..|+.++|...+++.
T Consensus 180 ~~----P~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 180 QA----PKDLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HS----TTCHHHHHHHHHHHTC--------------
T ss_pred hC----CCChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 42 12356778899988 799999999888765
No 36
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.67 E-value=5.6e-15 Score=117.46 Aligned_cols=157 Identities=14% Similarity=0.106 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
..+.+.|.++...|++++|+.+|++++.+... ....++.++|.++. .|++++|+.+|++++++.+. -.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~ 76 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNN-----QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN------LA 76 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS------HH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCC-----CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc------hH
Confidence 78999999999999999999999999988531 12256777999999 89999999999999976553 24
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC-cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCch--H
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA-TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSD--Q 165 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~--e 165 (233)
.++..+|.++..+|++++|+.+|++++.+...... ....+.++..+|.++...|++++|+..|++++.+. +. .
T Consensus 77 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~----p~~~~ 152 (228)
T 4i17_A 77 NAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT----SKKWK 152 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS----CHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC----CCccc
Confidence 68999999999999999999999999987433211 12234678999999999999999999999998652 23 4
Q ss_pred HHHHHHHHHHH-hcCCH
Q 026767 166 NRCATKLISAY-TEGDV 181 (233)
Q Consensus 166 ~~~l~~L~~a~-~~gd~ 181 (233)
..++..++.++ ..|+.
T Consensus 153 ~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 153 TDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56777888877 56665
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.64 E-value=1.4e-14 Score=122.73 Aligned_cols=167 Identities=11% Similarity=-0.016 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH-
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM- 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~- 86 (233)
+.++..+|.+|...|++++|+.+|++++.+. + ....++.++|.+|. .|++++|+.+|++++++.+.......
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 172 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLELQ-----P-NNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKN 172 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC---
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-----C-CCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhh
Confidence 4567777777777788888888888777763 1 22556777777777 67777777777777776554321110
Q ss_pred ---------------------------------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchH
Q 026767 87 ---------------------------------------AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQ 127 (233)
Q Consensus 87 ---------------------------------------~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 127 (233)
...++.++|.++...|++++|+.+|++++.+. +..
T Consensus 173 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~ 246 (365)
T 4eqf_A 173 KKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR------PED 246 (365)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTC
T ss_pred hccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC------CCC
Confidence 12456677777777777777777777777652 222
Q ss_pred HHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 128 CKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 128 a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..++.++|.++...|++++|+.+|++++.+. +....++..++.++ ..|++++|...++++
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 307 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQ----PGFIRSRYNLGISCINLGAYREAVSNFLTA 307 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC----CCchHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4466777777777777777777777776432 11255666777776 677777777777776
No 38
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.63 E-value=4.7e-14 Score=110.44 Aligned_cols=167 Identities=10% Similarity=-0.002 Sum_probs=140.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
....+.++..+|.++...|++++|+.+|++++.... ....++..+|.++. .|++++|+.+|++++.+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-- 75 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDP------KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-- 75 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCc------cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--
Confidence 345678899999999999999999999999998742 22568899999999 799999999999999876532
Q ss_pred hHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCC
Q 026767 84 EQMAFDLYRAATNVYIKL-EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLR 162 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~ 162 (233)
..++..+|.++... |++++|+.+|++++. .+..+....++..+|.++...|++++|+..|++++....
T Consensus 76 ----~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~--- 144 (225)
T 2vq2_A 76 ----AEINNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP--- 144 (225)
T ss_dssp ----HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---
T ss_pred ----hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---
Confidence 35788999999999 999999999999986 233445567889999999999999999999999984421
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....++..++.++ ..|+++.|...+++.
T Consensus 145 -~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 173 (225)
T 2vq2_A 145 -QFPPAFKELARTKMLAGQLGDADYYFKKY 173 (225)
T ss_dssp -TCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1256777888888 899999999999988
No 39
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.62 E-value=4.5e-14 Score=113.20 Aligned_cols=168 Identities=15% Similarity=0.086 Sum_probs=138.5
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g 82 (233)
++...+.++..+|.+|...|++++|+.+|++++... + ....++..+|.++. .|++++|+++|++++++.+..
T Consensus 32 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~- 104 (252)
T 2ho1_A 32 GRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEID-----P-SSADAHAALAVVFQTEMEPKLADEEYRKALASDSRN- 104 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC-----C-ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-
Confidence 466668999999999999999999999999999873 1 23678889999999 799999999999999885532
Q ss_pred ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCC
Q 026767 83 KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLR 162 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~ 162 (233)
..++..+|.++...|++++|+.+|++++. .+..+....++..+|.++...|++++|..+|++++....
T Consensus 105 -----~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~--- 172 (252)
T 2ho1_A 105 -----ARVLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR--- 172 (252)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---
T ss_pred -----HHHHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc---
Confidence 35788999999999999999999999885 233455667889999999999999999999999884431
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....++..++.++ ..|+.+.|...+++.
T Consensus 173 -~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 201 (252)
T 2ho1_A 173 -NQPSVALEMADLLYKEREYVPARQYYDLF 201 (252)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1255677888887 789999999999888
No 40
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.62 E-value=2.5e-14 Score=108.44 Aligned_cols=168 Identities=9% Similarity=0.074 Sum_probs=140.1
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 2 LSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 2 ~~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
++++...+..+...|.++...|++++|+.++++++.... ....++..+|.++. .|++++|+.++++++++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 74 (186)
T 3as5_A 1 MGNDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADA------FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD 74 (186)
T ss_dssp ---CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTS------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCccchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 356677889999999999999999999999999976532 23678899999999 89999999999999988543
Q ss_pred cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCC
Q 026767 81 DDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 160 (233)
Q Consensus 81 ~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~ 160 (233)
. ..++..+|.++...|++++|+.++++++.... ....++..+|.++...|++++|..++++++....
T Consensus 75 ~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~- 141 (186)
T 3as5_A 75 N------VKVATVLGLTYVQVQKYDLAVPLLIKVAEANP------INFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP- 141 (186)
T ss_dssp C------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-
T ss_pred C------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc------HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc-
Confidence 2 35788999999999999999999999997632 2346789999999999999999999999985431
Q ss_pred CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 161 LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 161 ~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....+...++.++ ..|+.+.|...++++
T Consensus 142 ---~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 170 (186)
T 3as5_A 142 ---NEGKVHRAIAFSYEQMGRHEEALPHFKKA 170 (186)
T ss_dssp ---TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2256778889888 899999999999887
No 41
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.61 E-value=3.2e-14 Score=117.78 Aligned_cols=170 Identities=8% Similarity=-0.028 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
.++..+|.+|...|++++|+.+|++++.+... ...++..+|.++. .|++++|+.+|++++++.+.. .
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~ 193 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG------CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED------P 193 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC------H
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhccc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC------h
Confidence 44566666666666666666666666665422 1234555777777 688888888888887765432 3
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc---chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT---NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQ 165 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~---~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e 165 (233)
.++..+|.++...|++++|+.+|++++.+....+.. .....++..+|.++...|++++|+.+|++++.... ..
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~----~~ 269 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP----QN 269 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST----TC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc----cc
Confidence 578899999999999999999999999987665554 33356889999999999999999999999985431 23
Q ss_pred HHHHHHHHHHH-hcCCHHHHHHHHhhc-cccc
Q 026767 166 NRCATKLISAY-TEGDVEEIKRVAQSS-AISN 195 (233)
Q Consensus 166 ~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ 195 (233)
..++..++.++ ..|+++.|...++++ .+..
T Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 301 (330)
T 3hym_B 270 ASTYSAIGYIHSLMGNFENAVDYFHTALGLRR 301 (330)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCS
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHccCC
Confidence 46778889988 799999999999999 4443
No 42
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.61 E-value=2.9e-14 Score=120.74 Aligned_cols=171 Identities=12% Similarity=0.056 Sum_probs=139.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+...+..+...|.++...|++++|+.+|++++.+.. ..+.++..+|.++. .|++++|+.+|++++++.+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-- 132 (365)
T 4eqf_A 61 PFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDP------GDAEAWQFLGITQAENENEQAAIVALQRCLELQPNN-- 132 (365)
T ss_dssp TTTTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred cccchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC--
Confidence 334456688999999999999999999999998742 23778999999999 899999999999999986532
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc--------------------------------------
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN-------------------------------------- 125 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------------------------------------- 125 (233)
..++.++|.++..+|++++|+.+|++++.+........
T Consensus 133 ----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 208 (365)
T 4eqf_A 133 ----LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNG 208 (365)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSC
T ss_pred ----HHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCc
Confidence 35789999999999999999999999987644322111
Q ss_pred h--HHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 126 S--QCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 126 ~--~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
. ...++..+|.++...|++++|+.+|++++.... ....++..++.++ ..|+++.|...++++
T Consensus 209 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p----~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 273 (365)
T 4eqf_A 209 DMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP----EDYSLWNRLGATLANGDRSEEAVEAYTRA 273 (365)
T ss_dssp SSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1 356788999999999999999999999884421 2256788899888 789999999999988
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.61 E-value=3.5e-14 Score=103.67 Aligned_cols=107 Identities=17% Similarity=0.090 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC-
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD- 82 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g- 82 (233)
..+.|.++.++|+.+...|++++|+.+|++|+++. | .-+.++.++|.+|. .|++++|+++|++|+++.+...
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-----p-~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELD-----P-SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 45778889999999999999999999999998873 2 23678889999999 7999999999999999988765
Q ss_pred ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 83 KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.....+.++.++|.++..+|+|++|+++|++++..
T Consensus 78 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 45556678899999999999999999999998865
No 44
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.59 E-value=3.1e-13 Score=108.27 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
..++..+|.+|...|++++|+.+|++++.+.. ....++..+|.++. .|++++|+.+|++++. .+.....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~ 140 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDS------RNARVLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPER 140 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc------CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCccc
Confidence 56788999999999999999999999998742 23578899999999 7999999999999997 2222223
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNR 167 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~ 167 (233)
..++..+|.++...|++++|+.+|++++... +....++..+|.++...|++++|...|++++.... ....
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~----~~~~ 210 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLN------RNQPSVALEMADLLYKEREYVPARQYYDLFAQGGG----QNAR 210 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC----CCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc----CcHH
Confidence 4688999999999999999999999999763 22356789999999999999999999999985432 1245
Q ss_pred HHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 168 CATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 168 ~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.+..++..+ ..|+.+.|...+++.
T Consensus 211 ~~~~~~~~~~~~g~~~~A~~~~~~~ 235 (252)
T 2ho1_A 211 SLLLGIRLAKVFEDRDTAASYGLQL 235 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 667778877 799999999999988
No 45
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.59 E-value=1.7e-13 Score=108.75 Aligned_cols=161 Identities=18% Similarity=0.152 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
..++..+|.+|...|++++|+.+|++++.+.. ....++..+|.++. .|++++|+.+|++++++.+..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------ 124 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDS------SAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN------ 124 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------cchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC------
Confidence 56777888888888888888888888887632 23567788888888 788888888888888876532
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNR 167 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~ 167 (233)
..++..+|.++...|++++|+.+|++++.... ....++..+|.++...|++++|+..|++++.... ....
T Consensus 125 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~----~~~~ 194 (243)
T 2q7f_A 125 GDLFYMLGTVLVKLEQPKLALPYLQRAVELNE------NDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP----GHAD 194 (243)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT----TCHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc----ccHH
Confidence 24677888888888888888888888886532 2244678888888888888888888888874321 1245
Q ss_pred HHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 168 CATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 168 ~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++..++.++ ..|+.+.|...++++
T Consensus 195 ~~~~la~~~~~~~~~~~A~~~~~~~ 219 (243)
T 2q7f_A 195 AFYNAGVTYAYKENREKALEMLDKA 219 (243)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 677788877 788888888888887
No 46
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.59 E-value=1.1e-13 Score=112.47 Aligned_cols=174 Identities=11% Similarity=-0.007 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.+..+...|..+...|++++|+.+|++++..+ .+......++..+|.++. .|++++|+.+|++++.+++.....
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~-- 88 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG---RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV-- 88 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC---SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH--
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh--
Confidence 45778899999999999999999999998865 223345788999999999 899999999999999998765432
Q ss_pred HHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHHhHccCcchHHHhH--------------HHHHHHHHhhCCH
Q 026767 87 AFDLYRAATNVYIK--------LEKYADAATFLLRWGLAADKCNATNSQCKAY--------------LSAIIVYLYANDF 144 (233)
Q Consensus 87 ~~~~l~~lg~~~~~--------~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~--------------~~lg~~~~~~gd~ 144 (233)
..++..+|.++.. .|++++|+..|++++...... .....++ +.+|.+|...|++
T Consensus 89 -~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~ 164 (261)
T 3qky_A 89 -PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH---ELVDDATQKIRELRAKLARKQYEAARLYERRELY 164 (261)
T ss_dssp -HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred -HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence 3579999999999 999999999999999865332 2222233 8899999999999
Q ss_pred HHHHHHHHHhhcC-CCCCCchHHHHHHHHHHHH-hc----------CCHHHHHHHHhhcc
Q 026767 145 KQAEKCYNDCSQV-DAFLRSDQNRCATKLISAY-TE----------GDVEEIKRVAQSSA 192 (233)
Q Consensus 145 ~~A~~~~~~al~~-~~~~~~~e~~~l~~L~~a~-~~----------gd~~~a~~~~~~~~ 192 (233)
.+|+..|++++.. +.. .....++..++.++ .. |++++|...+++.+
T Consensus 165 ~~A~~~~~~~l~~~p~~--~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~ 222 (261)
T 3qky_A 165 EAAAVTYEAVFDAYPDT--PWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLL 222 (261)
T ss_dssp HHHHHHHHHHHHHCTTS--TTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCC--chHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHH
Confidence 9999999999843 322 22455777888877 45 88888988888873
No 47
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.59 E-value=9.2e-14 Score=117.16 Aligned_cols=167 Identities=11% Similarity=0.003 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH-
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM- 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~- 86 (233)
..++..+|.+|...|++++|+.+|++++.+.. ....++..+|.++. .|++++|+.+|++++.+.+.......
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 171 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCLELKP------DNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTP 171 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC-
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 34566666777777777777777777766531 12456666777777 67777777777766655433221110
Q ss_pred --------------------------------------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc
Q 026767 87 --------------------------------------------AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN 122 (233)
Q Consensus 87 --------------------------------------------~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 122 (233)
...++.++|.++...|++++|+.+|++++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---- 247 (368)
T 1fch_A 172 AEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR---- 247 (368)
T ss_dssp --------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred HHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----
Confidence 13466777778888888888888888777652
Q ss_pred CcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 123 ATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 123 ~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+....++..+|.++...|++++|+..|++++.+. +....++..++.++ ..|+++.|...++++
T Consensus 248 --~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 311 (368)
T 1fch_A 248 --PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ----PGYIRSRYNLGISCINLGAHREAVEHFLEA 311 (368)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 2224567778888888888888888888777432 12245667777777 678888888877777
No 48
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1e-13 Score=119.83 Aligned_cols=176 Identities=7% Similarity=-0.038 Sum_probs=155.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCc-----------hHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 16 AALAKELHNWREVADFYRKASELYNECGRS-----------QPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 16 g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~-----------~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
|..+...|++++|++.|.+++......++. .....++.++|.+|. .|++++|+++|.+++.++...++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 444555899999999999999987766653 234467999999999 89999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CC-CC
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DA-FL 161 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~-~~ 161 (233)
......+...+|.++...|++++|+.++++++.+....+.....++++.++|.++...|+|.+|...+++++.. .. ..
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~ 170 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD 170 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999843 33 24
Q ss_pred CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 162 RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
......++..+++.| ..||+++|...++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 201 (434)
T 4b4t_Q 171 KPSLVDVHLLESKVYHKLRNLAKSKASLTAA 201 (434)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 567788999999999 899999999999887
No 49
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.58 E-value=7.4e-14 Score=113.05 Aligned_cols=163 Identities=9% Similarity=-0.057 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
..+...|.++...|++++|+.+|++++..... ...++..+|.++. .|++++|+.+|+++++ .. ++....+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~--~~~~~~~ 74 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYN------SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KV--NATKAKS 74 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCC------CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TS--CTTTCCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc--CchhHHH
Confidence 45678899999999999999999999876432 2346888999999 7999999999999998 22 3333345
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRC 168 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~ 168 (233)
.++..+|.++...|++++|+.+|++++.+.. ....++..+|.++...|++++|+.+|++++... +....+
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~----~~~~~~ 144 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDT------TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT----TTDPKV 144 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS----CCCHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC----CCcHHH
Confidence 6789999999999999999999999998632 234578999999999999999999999998652 233567
Q ss_pred HHHHH-HHHhcCCHHHHHHHHhhc
Q 026767 169 ATKLI-SAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 169 l~~L~-~a~~~gd~~~a~~~~~~~ 191 (233)
+..++ ..+..++++.|...++++
T Consensus 145 ~~~l~~~~~~~~~~~~A~~~~~~a 168 (272)
T 3u4t_A 145 FYELGQAYYYNKEYVKADSSFVKV 168 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888 677778999999999888
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=1.5e-13 Score=107.68 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
..+..+.+.|.++...|++++|+.+|++++ ++ .+.++.++|.++. .|++++|+.+|++++.+.+..
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~-------~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---- 70 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ-------DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---- 70 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS-------SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc-------CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc----
Confidence 456678899999999999999999999984 22 3578999999999 899999999999999986432
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc----------CcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN----------ATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..++.++|.++..+|++++|+.+|++++.+..... ..+....++.++|.++...|++++|..+|++++
T Consensus 71 --~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 71 --AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALAT 148 (213)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 35899999999999999999999999998765443 344566889999999999999999999999998
Q ss_pred cCC
Q 026767 156 QVD 158 (233)
Q Consensus 156 ~~~ 158 (233)
.+.
T Consensus 149 ~~~ 151 (213)
T 1hh8_A 149 SMK 151 (213)
T ss_dssp TTC
T ss_pred HcC
Confidence 554
No 51
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.57 E-value=3.5e-14 Score=125.96 Aligned_cols=165 Identities=13% Similarity=-0.002 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 7 DAAKHMESAAALAKELHNW-REVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~-~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
..+..+...|.+|...|++ ++|+.+|++|+.+. + ..+.++.++|.+|. .|++++|+++|++|+++.+.
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-----p-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---- 169 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-----P-ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN---- 169 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC----
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----
Confidence 3467899999999999999 99999999999884 2 34678999999999 89999999999999988532
Q ss_pred HHHHHHHHHHHHHHHHh---------ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh--------CCHHHH
Q 026767 85 QMAFDLYRAATNVYIKL---------EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA--------NDFKQA 147 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~---------g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--------gd~~~A 147 (233)
..++.++|.++..+ |++++|+.+|++++.+. +....++.++|.++... |++++|
T Consensus 170 ---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A 240 (474)
T 4abn_A 170 ---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD------VLDGRSWYILGNAYLSLYFNTGQNPKISQQA 240 (474)
T ss_dssp ---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 26899999999999 99999999999999863 33456789999999999 999999
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 148 EKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 148 ~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+.+|++++.+... ......++..++.++ ..|++++|...++++
T Consensus 241 ~~~~~~al~~~p~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 284 (474)
T 4abn_A 241 LSAYAQAEKVDRK-ASSNPDLHLNRATLHKYEESYGEALEGFSQA 284 (474)
T ss_dssp HHHHHHHHHHCGG-GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-cccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999854210 114577888999988 799999999999988
No 52
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.56 E-value=9.1e-14 Score=117.21 Aligned_cols=171 Identities=9% Similarity=0.018 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCch------------------------------------------
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQ------------------------------------------ 46 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~------------------------------------------ 46 (233)
..++..+|.+|...|++++|+.+|++++.+........
T Consensus 132 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 211 (368)
T 1fch_A 132 QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLD 211 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhC
Confidence 45677888888888888888888888776432211111
Q ss_pred -H--HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc
Q 026767 47 -P--ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN 122 (233)
Q Consensus 47 -~--~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 122 (233)
. .+.++.++|.++. .|++++|+.+|++++.+.+.. ..++.++|.++...|++++|+.+|++++.+.
T Consensus 212 p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---- 281 (368)
T 1fch_A 212 PTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND------YLLWNKLGATLANGNQSEEAVAAYRRALELQ---- 281 (368)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----
Confidence 1 3678889999999 799999999999999985532 3588999999999999999999999999762
Q ss_pred CcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCC-C-----CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 123 ATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAF-L-----RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 123 ~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~-~-----~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+....++..+|.++...|++.+|..+|++++.+ +.. . ......+...|+.++ ..|+.+.|...+++.
T Consensus 282 --~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 356 (368)
T 1fch_A 282 --PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARD 356 (368)
T ss_dssp --TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTC
T ss_pred --CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHH
Confidence 234567899999999999999999999999844 222 1 122267888999999 799999999998876
No 53
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.56 E-value=2.7e-13 Score=115.78 Aligned_cols=125 Identities=17% Similarity=0.144 Sum_probs=70.1
Q ss_pred HHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHH
Q 026767 51 ALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCK 129 (233)
Q Consensus 51 ~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~ 129 (233)
++.++|.++. .|++++|+..|++++.+.+.. ..++.++|.++...|++++|+.+|++++.+ .+....
T Consensus 205 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~ 272 (388)
T 1w3b_A 205 AYINLGNVLKEARIFDRAVAAYLRALSLSPNH------AVVHGNLACVYYEQGLIDLAIDTYRRAIEL------QPHFPD 272 (388)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------CSSCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHH
Confidence 3444444444 344444444444444433211 235566666666666666666666666643 122234
Q ss_pred hHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 130 AYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 130 ~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++.++|.++...|++++|+..|++++... +....++..++.++ ..|+.++|...++++
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 331 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLC----PTHADSLNNLANIKREQGNIEEAVRLYRKA 331 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHC----TTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhC----cccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56667777777777777777777666332 11234556666666 567777777777666
No 54
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.55 E-value=5.4e-14 Score=122.92 Aligned_cols=177 Identities=11% Similarity=-0.047 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGR---SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~---~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
....+..|+.+|.+|..+|++++|+++|++|++++..... ....+.++.|+|.+|. .|++++|+.+|++++++.+.
T Consensus 47 ~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 47 REFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 3445788999999999999999999999999999887543 2346788999999999 89999999999999999997
Q ss_pred cCCh--HHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----------------
Q 026767 81 DDKE--QMAFDLYRAATNVYIKL--EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY---------------- 140 (233)
Q Consensus 81 ~g~~--~~~~~~l~~lg~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~---------------- 140 (233)
.... ...+.++.++|.++... ++|++|+++|++++.+... ...++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~------~~~~~~~~~~~~~~l~~~~~~~~al~~~~~ 200 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK------NPEFTSGLAIASYRLDNWPPSQNAIDPLRQ 200 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHHHHSCCCCCTHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 6532 12346788888877765 4799999999999875211 11223333333222
Q ss_pred -------------------------hCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 141 -------------------------ANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 141 -------------------------~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.|++.+|.+++++++... +....++..+|..+ ..|+++.|...++++
T Consensus 201 al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~----~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 273 (472)
T 4g1t_A 201 AIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA----PGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 (472)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC----SSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC----ccHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 234444555555444221 12345667788877 788888888888888
No 55
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.55 E-value=1.2e-13 Score=100.74 Aligned_cols=106 Identities=18% Similarity=0.126 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc-C
Q 026767 46 QPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN-A 123 (233)
Q Consensus 46 ~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~ 123 (233)
...|.++.++|.++. .|++++|+.+|++|+++.+.. ..++.++|.+|..+|+|++|+..|++++.+..... .
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 467889999999999 899999999999999986542 35899999999999999999999999999876653 3
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
....+.++.++|.++..+|++.+|+++|++++..
T Consensus 79 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 79 YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3556789999999999999999999999999854
No 56
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=3.9e-13 Score=114.75 Aligned_cols=167 Identities=14% Similarity=0.063 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------------HHHcCCchHH--------------HHHHHHHHHHhh
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASEL--------------YNECGRSQPA--------------SDALAKAARALE 60 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l--------------~~~~g~~~~~--------------a~~l~~lg~~~~ 60 (233)
+.++.++|.+|...|++++|+.+|++++.+ +...|+...+ ..++.++|.++.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 566777777777777777777777777653 3334444333 456778899999
Q ss_pred -hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHH
Q 026767 61 -DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYL 139 (233)
Q Consensus 61 -~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~ 139 (233)
.|++++|+.+|++++++.+.. ..++.++|.++...|++++|+.+|++++.+. +....++.++|.++.
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~ 316 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHF------PDAYCNLANALKEKGSVAEAEDCYNTALRLC------PTHADSLNNLANIKR 316 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSC------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------cccHHHHHHHHHHHH
Confidence 799999999999999875432 2478999999999999999999999999763 233567899999999
Q ss_pred hhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 140 YANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 140 ~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..|++++|...|++++... +....+...++.++ ..|++++|...++++
T Consensus 317 ~~g~~~~A~~~~~~al~~~----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 365 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVF----PEFAAAHSNLASVLQQQGKLQEALMHYKEA 365 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSC----TTCHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcC----CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999999998543 12356788899988 899999999999988
No 57
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.55 E-value=1.2e-13 Score=122.54 Aligned_cols=163 Identities=10% Similarity=0.018 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h---------CCHHHHHHHHHHHHHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D---------AVPEDAIQLYTDACIML 78 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~---------g~~~~A~~~~~~Al~~~ 78 (233)
+.++.++|.+|...|++++|+.+|++|+.+. +. ..++.++|.++. . |++++|+.+|++|+++.
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 209 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHC-----KN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD 209 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC-----CC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----CC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC
Confidence 5689999999999999999999999999873 44 489999999999 8 99999999999999986
Q ss_pred HhcCChHHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHH
Q 026767 79 EEDDKEQMAFDLYRAATNVYIKL--------EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKC 150 (233)
Q Consensus 79 ~~~g~~~~~~~~l~~lg~~~~~~--------g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~ 150 (233)
+.. ..++.++|.++..+ |++++|+.+|++++.+.. .......++.++|.++...|++++|+..
T Consensus 210 p~~------~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 280 (474)
T 4abn_A 210 VLD------GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR---KASSNPDLHLNRATLHKYEESYGEALEG 280 (474)
T ss_dssp TTC------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG---GGGGCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCC------HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC---CcccCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 643 35889999999999 999999999999998721 1125567899999999999999999999
Q ss_pred HHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 151 YNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 151 ~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|++++.+... ...+...++.++ ..|+.+.|.....+.
T Consensus 281 ~~~al~l~p~----~~~a~~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 281 FSQAAALDPA----WPEPQQREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HHHHHHHCTT----CHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999854311 245667777777 567666666554433
No 58
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.55 E-value=1.8e-12 Score=101.34 Aligned_cols=164 Identities=11% Similarity=0.019 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-CCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-AVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
..++..+|.+|...|++++|+.+|++++.+.. ....++..+|.++. . |++++|+.+|+++++ .+....
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~ 111 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKP------DSAEINNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPT 111 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSC
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcc
Confidence 46788899999999999999999999998742 23567899999999 9 999999999999998 222222
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~ 166 (233)
...++..+|.++...|++++|+.+|++++... +....++..+|.++...|++.+|...+++++..... ...
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~ 182 (225)
T 2vq2_A 112 PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ------PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEV---LQA 182 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS---CCH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CCH
Confidence 34688999999999999999999999998763 223567899999999999999999999999844210 112
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..+..++..+ ..|+.+.+..+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~a~~~~~~~ 208 (225)
T 2vq2_A 183 DDLLLGWKIAKALGNAQAAYEYEAQL 208 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3345555665 789999999888877
No 59
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=1.5e-14 Score=108.62 Aligned_cols=126 Identities=10% Similarity=-0.081 Sum_probs=102.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026767 14 SAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYR 92 (233)
Q Consensus 14 ~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~ 92 (233)
.+|.+++..|++++|+..+++++... ......+..+|.+|. .|++++|+++|++++++.+.. ..++.
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~------p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~------~~a~~ 69 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSP------RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD------PKAHR 69 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSH------HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Confidence 47889999999999999999987654 345667788999999 799999999999999986643 36899
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHH-HHHhhcC
Q 026767 93 AATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKC-YNDCSQV 157 (233)
Q Consensus 93 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~-~~~al~~ 157 (233)
++|.++..+|++++|+.+|++++++ .+....+++++|.++...|++.+|.+. +++++.+
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVEL------NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 9999999999999999999999976 233456889999999999999887765 5888854
No 60
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.54 E-value=4.5e-13 Score=119.35 Aligned_cols=147 Identities=11% Similarity=-0.063 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-C-C
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNE-CGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-D-K 83 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~-~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g-~ 83 (233)
+....+.+..++.+|++++|+.+|++++++..+ .|. ....+.+++++|.+|. +|++++|+.+|++++++++.. | +
T Consensus 309 a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 388 (490)
T 3n71_A 309 SKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 334444556678899999999999999999976 444 4578999999999999 899999999999999999874 3 4
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc-c-CcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC-N-ATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
....+.+++++|.+|..+|+|++|+.+|++|+.+.+.. | +.+..+..+..++.++..++.|.+|+..|.++.
T Consensus 389 Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~ 462 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMR 462 (490)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556799999999999999999999999999998875 3 445667777999999999999999999998874
No 61
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.54 E-value=7.9e-14 Score=129.69 Aligned_cols=130 Identities=14% Similarity=0.065 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+.++.++|.+|..+|++++|+.+|++|+++. + .-+.++.++|.++. .|++++|+++|++|+++.+..
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~-----P-~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~------ 110 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRIS-----P-TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF------ 110 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Confidence 5689999999999999999999999999983 2 34778999999999 899999999999999986542
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+.++.++|.+|..+|++++|+.+|++++++ .+....++.++|.++..+|++.+|.+.+++++.
T Consensus 111 ~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l------~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~ 173 (723)
T 4gyw_A 111 ADAHSNLASIHKDSGNIPEAIASYRTALKL------KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVS 173 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHH
Confidence 368999999999999999999999999986 234466899999999999999999999999873
No 62
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=7.4e-13 Score=104.89 Aligned_cols=160 Identities=15% Similarity=0.059 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhhC----CHHHHHHHHHHHHHHHHhcC
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDA----VPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~g----~~~~A~~~~~~Al~~~~~~g 82 (233)
+-+.++.++|.+|...+++++|+.+|++|++. |+ +.++.++|.+|..+ ++++|+.+|++|++. |
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----g~----~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~----g 83 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----GD----GDALALLAQLKIRNPQQADYPQARQLAEKAVEA----G 83 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TC----HHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHT----T
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHC----C
Confidence 34678999999999999999999999999763 43 57789999999965 899999999999652 3
Q ss_pred ChHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHHHHh
Q 026767 83 KEQMAFDLYRAATNVYIK----LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCYNDC 154 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~~~a 154 (233)
+ ..++.++|.+|.. .+++++|+.+|+++++. +.......++++||.+|.. .+|+.+|+.+|+++
T Consensus 84 ~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~----~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 84 S----KSGEIVLARVLVNRQAGATDVAHAITLLQDAARD----SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGS 155 (212)
T ss_dssp C----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS----TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc----CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 3 3578999999998 88999999999999843 3322346789999999999 88999999999999
Q ss_pred hcCCCCCCchHHHHHHHHHHHHhc--C-----CHHHHHHHHhhc
Q 026767 155 SQVDAFLRSDQNRCATKLISAYTE--G-----DVEEIKRVAQSS 191 (233)
Q Consensus 155 l~~~~~~~~~e~~~l~~L~~a~~~--g-----d~~~a~~~~~~~ 191 (233)
+..+.. ......|+..|.. | |.++|...++.+
T Consensus 156 ~~~~~~-----~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 156 SSLSRT-----GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp HHTSCT-----THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred HHcCCC-----HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 865321 2367788988843 4 899999999988
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.52 E-value=1e-12 Score=106.13 Aligned_cols=168 Identities=12% Similarity=-0.039 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+...+.++..+|.+|...|++++|+.+|++++.+. + ....++.++|.++. .|++++|+.+|++++++.+..
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----~-~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~-- 110 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-----P-DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY-- 110 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----C-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-----C-CcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccc--
Confidence 45678999999999999999999999999999973 2 24568999999999 799999999999999986543
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCC--
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAF-- 160 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~-- 160 (233)
..++..+|.++...|++++|+.+|++++.+.... . .....++ +....|++.+|...+++++.. +..
T Consensus 111 ----~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~----~--~~~~~~~-~~~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (275)
T 1xnf_A 111 ----NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND----P--FRSLWLY-LAEQKLDEKQAKEVLKQHFEKSDKEQW 179 (275)
T ss_dssp ----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----H--HHHHHHH-HHHHHHCHHHHHHHHHHHHHHSCCCST
T ss_pred ----cHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC----h--HHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCcchH
Confidence 2588999999999999999999999999763221 1 1122222 235557777777777665521 110
Q ss_pred ------------------------------CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 161 ------------------------------LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 161 ------------------------------~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.......++..++.++ ..|+.+.|...++++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 241 (275)
T 1xnf_A 180 GWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLA 241 (275)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 0011256777888888 789999999999988
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=5.7e-13 Score=102.13 Aligned_cols=131 Identities=14% Similarity=0.000 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+.++.++|.+|...|++++|+.++.++..... ....++..+|.++. .++++.|+..+.+++.+.+..
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~------ 106 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDT------TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVY------ 106 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc------hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------
Confidence 46788999999999999999999999987642 23567888999999 799999999999999886643
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
..++..+|.++..+|++++|+.+|++++.+ .+....++.++|.++..+|++++|+++|++++.+
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISI------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHh------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 257889999999999999999999999976 2344668999999999999999999999999854
No 65
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.52 E-value=1.8e-12 Score=102.18 Aligned_cols=161 Identities=13% Similarity=0.052 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHH----------------HHHHhh-hCCHHHHHHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAK----------------AARALE-DAVPEDAIQLY 71 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~----------------lg~~~~-~g~~~~A~~~~ 71 (233)
+..+...|..+...|++++|+.+|++++.+.. .-+.++.. +|.++. .|++++|+.+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 77 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI------DRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFY 77 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH------HHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC------CChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 45677788899999999999999999998742 22334444 999999 89999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC--HHHHHH
Q 026767 72 TDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAND--FKQAEK 149 (233)
Q Consensus 72 ~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd--~~~A~~ 149 (233)
++++++.+.. ..++.++|.++...|++++|+.+|++++.+ .+....+++++|.++...|+ ...+..
T Consensus 78 ~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 145 (208)
T 3urz_A 78 KELLQKAPNN------VDCLEACAEMQVCRGQEKDALRMYEKILQL------EADNLAANIFLGNYYYLTAEQEKKKLET 145 (208)
T ss_dssp HHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999987653 368999999999999999999999999986 23445688999999987764 445566
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhcc
Q 026767 150 CYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSSA 192 (233)
Q Consensus 150 ~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~~ 192 (233)
.+.+++... ........+|.++ ..|++++|..++++++
T Consensus 146 ~~~~~~~~~-----~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 184 (208)
T 3urz_A 146 DYKKLSSPT-----KMQYARYRDGLSKLFTTRYEKARNSLQKVI 184 (208)
T ss_dssp HHC---CCC-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHhCCC-----chhHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 666654321 2222344456555 6899999999999994
No 66
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.52 E-value=7.8e-13 Score=118.70 Aligned_cols=173 Identities=10% Similarity=-0.014 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH--------------HHcCCchHH--------------HHHHHHHHHHhh
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELY--------------NECGRSQPA--------------SDALAKAARALE 60 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~--------------~~~g~~~~~--------------a~~l~~lg~~~~ 60 (233)
...+..+|.+|...|++++|+.+|++++.+. ...|+...+ ..++..+|.+|.
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 4566667777777777777777777766531 111111111 122333444444
Q ss_pred -hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch-HHHhHHHHHHHH
Q 026767 61 -DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS-QCKAYLSAIIVY 138 (233)
Q Consensus 61 -~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~a~~~~~lg~~~ 138 (233)
.|++++|+++|++++++.+. + ..++..+|.++.+.|++++|+.+|++++.+..+.+..+. ...++..+|.++
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~--~----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~ 526 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQY--D----PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAY 526 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCC--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCC--C----hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 35555555555555443221 0 134556666666666666666666666655544333332 245566666666
Q ss_pred HhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 139 LYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 139 ~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...|++++|++.|++++... +....+...|+.++ ..|++++|...+++.
T Consensus 527 ~~~g~~~~A~~~~~~~~~~~----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 576 (597)
T 2xpi_A 527 RKLKMYDAAIDALNQGLLLS----TNDANVHTAIALVYLHKKIPGLAITHLHES 576 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHS----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhC----CCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 66666666666666665322 11234555566655 566666666666665
No 67
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.52 E-value=2.3e-12 Score=102.69 Aligned_cols=175 Identities=10% Similarity=-0.047 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+.+.|..+...|++++|+..|++++..+. +......++..+|.++. .|++++|+..|+++++.++.....
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p---~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~--- 77 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYP---FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI--- 77 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH---
Confidence 45678889999999999999999999998653 22335678999999999 899999999999999998875532
Q ss_pred HHHHHHHHHHHHH------------------hccHHHHHHHHHHHHHHHhHccCcc-----------hHHHhHHHHHHHH
Q 026767 88 FDLYRAATNVYIK------------------LEKYADAATFLLRWGLAADKCNATN-----------SQCKAYLSAIIVY 138 (233)
Q Consensus 88 ~~~l~~lg~~~~~------------------~g~~~~A~~~~~~al~~~~~~~~~~-----------~~a~~~~~lg~~~ 138 (233)
..++..+|.++.. .|++++|+..|++++..+....... ..+.....+|.++
T Consensus 78 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~ 157 (225)
T 2yhc_A 78 DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYY 157 (225)
T ss_dssp HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777777765 6899999999999987543322111 0112236789999
Q ss_pred HhhCCHHHHHHHHHHhhcC-CCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 139 LYANDFKQAEKCYNDCSQV-DAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 139 ~~~gd~~~A~~~~~~al~~-~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...|++.+|+..|++++.. +.. ..-..++..++.++ ..|+.+.|...++..
T Consensus 158 ~~~~~~~~A~~~~~~~l~~~p~~--~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l 210 (225)
T 2yhc_A 158 TERGAWVAVVNRVEGMLRDYPDT--QATRDALPLMENAYRQMQMNAQAEKVAKII 210 (225)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTS--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHHHCcCC--CccHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 9999999999999999843 422 22346788999999 899999999988765
No 68
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.51 E-value=2.1e-13 Score=110.34 Aligned_cols=185 Identities=12% Similarity=0.020 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
.++..+|.+|...|++++|+.++++++.. ..++...+.++..+|.++. .|++++|+.+|++++++.+...
T Consensus 38 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~------ 108 (272)
T 3u4t_A 38 YIYNRRAVCYYELAKYDLAQKDIETYFSK---VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL------ 108 (272)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHTT---SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH------
Confidence 35667777777777788888777777772 2555556677777777777 6777777777777777655422
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHH---------------------------------
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAI--------------------------------- 135 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg--------------------------------- 135 (233)
.++.++|.++...|++++|+.+|++++.+ .+....++..+|
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 182 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIRP------TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWR 182 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCCS------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhhc------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 36667777777777777777777766543 122233444444
Q ss_pred -HHHHhhCC---HHHHHHHHHHhhcCCCC-CC---chHHHHHHHHHHHH-hcCCHHHHHHHHhhc-ccccchHHHHHHhc
Q 026767 136 -IVYLYAND---FKQAEKCYNDCSQVDAF-LR---SDQNRCATKLISAY-TEGDVEEIKRVAQSS-AISNLDHVIIKLAR 205 (233)
Q Consensus 136 -~~~~~~gd---~~~A~~~~~~al~~~~~-~~---~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ld~~~~~l~~ 205 (233)
.++...|+ +.+|...|++++..... .. .....+...|+..+ ..|+++.|..+++++ .+.+-++.......
T Consensus 183 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~ 262 (272)
T 3u4t_A 183 ARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLK 262 (272)
T ss_dssp HHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHC
T ss_pred HHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHHhh
Confidence 44444444 44444444444422110 00 11234666678777 688888888888888 45544455555544
Q ss_pred cCCC
Q 026767 206 KLPT 209 (233)
Q Consensus 206 ~l~~ 209 (233)
.+..
T Consensus 263 ~~~~ 266 (272)
T 3u4t_A 263 MKLE 266 (272)
T ss_dssp ----
T ss_pred hhhc
Confidence 4433
No 69
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.51 E-value=1.4e-12 Score=106.25 Aligned_cols=123 Identities=14% Similarity=0.183 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-----hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-----DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-----~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+.++..+|.+|...|++++|+.+|++|++ .++ ..++.++|.++. .+++++|+.+|++|+++ ++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----~~~----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~~ 73 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD----LKE----NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----NY 73 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH----CCC----HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----CC
Confidence 45666666766666777777777766665 122 234555555554 24556666666665544 11
Q ss_pred hHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHHHHhh
Q 026767 84 EQMAFDLYRAATNVYIK----LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCYNDCS 155 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~~~al 155 (233)
..++.++|.++.. .+++++|+.+|++++.. + ...++.++|.+|.. .+++++|+.+|++++
T Consensus 74 ----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~ 141 (273)
T 1ouv_A 74 ----SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL----K----YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKAC 141 (273)
T ss_dssp ----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc----C----CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHH
Confidence 2345555555555 55555555555555532 1 22344555555555 555555555555554
No 70
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.51 E-value=4.5e-13 Score=110.82 Aligned_cols=165 Identities=12% Similarity=0.008 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 9 AKHMESAAALAKELH-NWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g-~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
..++..+|.++...| ++++|+.+|++++.+.. ....++..+|.++. .|++++|+.+|++++++.+...
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~---- 159 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEK------TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCH---- 159 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCT------TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCS----
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccH----
Confidence 456778888888888 88888888888876532 23456888899988 7999999999999998876532
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC-CC----C
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD-AF----L 161 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~-~~----~ 161 (233)
.++..+|.++...|++++|+.+|++++.+. +....++..+|.++...|++++|...|++++... .. .
T Consensus 160 --~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 231 (330)
T 3hym_B 160 --LPMLYIGLEYGLTNNSKLAERFFSQALSIA------PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT 231 (330)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc
Confidence 356679999999999999999999988652 2335678999999999999999999999998432 21 1
Q ss_pred CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 162 RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
......++..++.++ ..|+++.|...++++
T Consensus 232 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 262 (330)
T 3hym_B 232 VDKWEPLLNNLGHVCRKLKKYAEALDYHRQA 262 (330)
T ss_dssp TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 133356788899988 799999999999988
No 71
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=3.1e-13 Score=116.93 Aligned_cols=164 Identities=9% Similarity=-0.023 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC-HHHHHHHHHHHHHHHHhcCC
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-PEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-~~~A~~~~~~Al~~~~~~g~ 83 (233)
..-+.++..+|.++...|++++|+.+|++++.+. ..-..++.++|.++. .|+ +++|+.+|++++++.+..
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~------P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~-- 165 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELN------AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN-- 165 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC--
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC------ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC--
Confidence 3467889999999999999999999999999874 235678999999999 796 999999999999987753
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCc
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRS 163 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~ 163 (233)
..++.++|.++..+|++++|+.+|++++.+ .+....++.++|.++..+|++++|+.+|++++.+.-
T Consensus 166 ----~~a~~~~g~~~~~~g~~~eAl~~~~kal~l------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P---- 231 (382)
T 2h6f_A 166 ----YQVWHHRRVLVEWLRDPSQELEFIADILNQ------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV---- 231 (382)
T ss_dssp ----HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT----
T ss_pred ----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC----
Confidence 368999999999999999999999999976 334467899999999999999999999999995431
Q ss_pred hHHHHHHHHHHHH-h-cCCHHHH-----HHHHhhc
Q 026767 164 DQNRCATKLISAY-T-EGDVEEI-----KRVAQSS 191 (233)
Q Consensus 164 ~e~~~l~~L~~a~-~-~gd~~~a-----~~~~~~~ 191 (233)
....+...++.++ . .|..+.| ..+++++
T Consensus 232 ~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~A 266 (382)
T 2h6f_A 232 RNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEM 266 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 2256777888888 5 4553555 3556666
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.51 E-value=1.5e-12 Score=108.56 Aligned_cols=174 Identities=12% Similarity=0.041 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH-
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA- 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~- 87 (233)
.++..+|.+|...|++++|+.++++++.+. + ....++..+|.++. .|++++|+.+|++++++.+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-----~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 228 (359)
T 3ieg_A 155 ELRELRAECFIKEGEPRKAISDLKAASKLK-----S-DNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 228 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----S-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHH
Confidence 455666677777777777777777766542 1 22457788888888 799999999999998876654432111
Q ss_pred -----HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCC
Q 026767 88 -----FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLR 162 (233)
Q Consensus 88 -----~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~ 162 (233)
......+|.++...|++++|+.+|++++..... +.......+..+|.++...|++.+|...|++++...
T Consensus 229 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---- 302 (359)
T 3ieg_A 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME---- 302 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----
Confidence 112345688899999999999999999876422 223334567889999999999999999999998542
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc-cccc
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS-AISN 195 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ 195 (233)
+....++..++.++ ..|+++.|...++++ .+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p 337 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNE 337 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 22356788889988 799999999999998 4433
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.50 E-value=2.4e-13 Score=107.88 Aligned_cols=165 Identities=16% Similarity=0.123 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
..-.+..+...|.++...|++++|+.+|++++... + ....++..+|.++. .|++++|+.+|++++++.+..
T Consensus 19 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-- 90 (243)
T 2q7f_A 19 SHMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-----K-EDAIPYINFANLLSSVNELERALAFYDKALELDSSA-- 90 (243)
T ss_dssp -----------------------CCTTHHHHHTTC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred chhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-----c-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc--
Confidence 34567889999999999999999999999998742 2 23678899999999 899999999999999885532
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCc
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRS 163 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~ 163 (233)
..++..+|.++...|++++|+.+|++++.+.. ....++..+|.++...|++++|...+++++....
T Consensus 91 ----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---- 156 (243)
T 2q7f_A 91 ----ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGM------ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE---- 156 (243)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC------CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT----
T ss_pred ----hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC----
Confidence 35789999999999999999999999997632 2245789999999999999999999999985432
Q ss_pred hHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 164 DQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 164 ~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....+...++.++ ..|+++.|...+++.
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 185 (243)
T 2q7f_A 157 NDTEARFQFGMCLANEGMLDEALSQFAAV 185 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1245777888888 899999999999988
No 74
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.50 E-value=1.5e-12 Score=115.07 Aligned_cols=167 Identities=9% Similarity=0.073 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
..++..+|.+|...|++++|+.+|++++.+... ...++..+|.++. .|++++|+.+|++++++.+...
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~----- 378 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE------NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP----- 378 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-----
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-----
Confidence 456777788888888888888888888776422 2256777888888 7888888888888888765432
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh----------CCHHHHHHHHHHhhcC
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA----------NDFKQAEKCYNDCSQV 157 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~----------gd~~~A~~~~~~al~~ 157 (233)
.++..+|.++...|++++|+.+|++++.+.............+..++.++... |++.+|...|++++..
T Consensus 379 -~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 457 (537)
T 3fp2_A 379 -EVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL 457 (537)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh
Confidence 46778888888899999999999998888766655555555567788888888 8999999999988744
Q ss_pred CCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 158 DAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 158 ~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.. ....++..++.++ ..|+.+.|...++++
T Consensus 458 ~p----~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 488 (537)
T 3fp2_A 458 DP----RSEQAKIGLAQLKLQMEKIDEAIELFEDS 488 (537)
T ss_dssp CT----TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CC----CCHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 21 2246778889988 799999999999988
No 75
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.49 E-value=9.9e-13 Score=95.85 Aligned_cols=99 Identities=8% Similarity=-0.009 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
..|.++.+.|+.|...|++++|+.+|++|+.+. + .-+.++.++|.++. .|++++|+..|++|+++.+..
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 80 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-----P-ENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF---- 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh----
Confidence 345556666666666666666666666665542 1 12445556666665 566666666666666553321
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
..++.++|.++..+|++++|+..|++++++
T Consensus 81 --~~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 81 --IKGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 235555666666666666666666666554
No 76
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.49 E-value=2.5e-12 Score=104.78 Aligned_cols=153 Identities=16% Similarity=0.182 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-----hCCHHHHHHHHHHHHHHHH
Q 026767 9 AKHMESAAALAKE----LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-----DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 9 a~~~~~~g~~~~~----~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-----~g~~~~A~~~~~~Al~~~~ 79 (233)
..++.++|.+|.. .+++++|+.+|++|+++ + ...++.++|.+|. .+++++|+.+|++|++.
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-- 107 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----N----YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-- 107 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----C----CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--
Confidence 4577788888888 88888888888888765 2 3556777777776 37788888888888765
Q ss_pred hcCChHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHH
Q 026767 80 EDDKEQMAFDLYRAATNVYIK----LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCY 151 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~ 151 (233)
++ ..++.++|.+|.. .+++++|+.+|+++++. + ...++.++|.++.. .+++++|..+|
T Consensus 108 --~~----~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~ 173 (273)
T 1ouv_A 108 --KY----AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL----N----DGDGCTILGSLYDAGRGTPKDLKKALASY 173 (273)
T ss_dssp --TC----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred --CC----ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc----C----cHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence 21 2467778888877 78888888888877753 1 23456777777777 77777777777
Q ss_pred HHhhcCCCCCCchHHHHHHHHHHHH-h----cCCHHHHHHHHhhc
Q 026767 152 NDCSQVDAFLRSDQNRCATKLISAY-T----EGDVEEIKRVAQSS 191 (233)
Q Consensus 152 ~~al~~~~~~~~~e~~~l~~L~~a~-~----~gd~~~a~~~~~~~ 191 (233)
++++... .......|+..+ . .+|.++|...++++
T Consensus 174 ~~a~~~~------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a 212 (273)
T 1ouv_A 174 DKACDLK------DSPGCFNAGNMYHHGEGATKNFKEALARYSKA 212 (273)
T ss_dssp HHHHHTT------CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHCC------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 7776431 134556677766 5 67777777777776
No 77
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.49 E-value=4.7e-12 Score=104.47 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRC 168 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~ 168 (233)
.++..+|.++...|++++|+.++++++.+. +....++..+|.++...|++++|...|++++.... ....+
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~----~~~~~ 242 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELR------PDDAQLWNKLGATLANGNRPQEALDAYNRALDINP----GYVRV 242 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----CCHHH
Confidence 456666666666666666666666666542 12234556666666666666666666666653321 12334
Q ss_pred HHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 169 ATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 169 l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...++.++ ..|+++.|...++++
T Consensus 243 ~~~l~~~~~~~g~~~~A~~~~~~a 266 (327)
T 3cv0_A 243 MYNMAVSYSNMSQYDLAAKQLVRA 266 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHH
Confidence 55666655 566666666666665
No 78
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.49 E-value=4.1e-12 Score=104.85 Aligned_cols=171 Identities=13% Similarity=0.095 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
+......+...|..+...|++++|+.+|++++.... ....++..+|.++. .|++++|+.+|++++++.+..
T Consensus 17 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-- 88 (327)
T 3cv0_A 17 PYMYHENPMEEGLSMLKLANLAEAALAFEAVCQAAP------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD-- 88 (327)
T ss_dssp GGGGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred chhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC--
Confidence 334445566777777777888888888887776531 23456667777777 677777777777777764322
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc------------------------------------------
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC------------------------------------------ 121 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~------------------------------------------ 121 (233)
..++..+|.++...|++++|+.+|++++......
T Consensus 89 ----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 164 (327)
T 3cv0_A 89 ----IAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAA 164 (327)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHH
Confidence 2456667777777777777777766665421100
Q ss_pred -cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 122 -NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 122 -~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...+....++..+|.++...|++++|...+++++.... ....++..++..+ ..|+++.|...++++
T Consensus 165 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 232 (327)
T 3cv0_A 165 LEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP----DDAQLWNKLGATLANGNRPQEALDAYNRA 232 (327)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC----CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 01122457789999999999999999999999985431 2256778889988 899999999999998
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.47 E-value=3.4e-12 Score=106.36 Aligned_cols=166 Identities=13% Similarity=0.040 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
.++..+|.+|...|++++|+.+|++++.+. + ....++..+|.++. .|++++|+.+|++++++.+..++.....
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 38 IAYYRRATVFLAMGKSKAALPDLTKVIALK-----M-DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----C-CcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHH
Confidence 455556666666666666666666666552 1 12255666677776 5777777777777766544110111110
Q ss_pred ---------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC
Q 026767 89 ---------DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA 159 (233)
Q Consensus 89 ---------~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~ 159 (233)
.....+|.++...|++++|+.+|++++... +....++..+|.++...|++++|...+++++....
T Consensus 112 ~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 185 (359)
T 3ieg_A 112 SQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC------VWDAELRELRAECFIKEGEPRKAISDLKAASKLKS 185 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 112233677777788888888887777642 22346788999999999999999999999885432
Q ss_pred CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 160 FLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 160 ~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....++..++.++ ..|+++.|...++++
T Consensus 186 ----~~~~~~~~la~~~~~~~~~~~A~~~~~~a 214 (359)
T 3ieg_A 186 ----DNTEAFYKISTLYYQLGDHELSLSEVREC 214 (359)
T ss_dssp ----CCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1245777888888 789999999988888
No 80
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.47 E-value=1.1e-12 Score=104.06 Aligned_cols=123 Identities=12% Similarity=0.097 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC-hHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK-EQMA 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~-~~~~ 87 (233)
.++.++|.+|...|++++|+.+|++++.+. + ....++.++|.++. .|++++|+.+|++++++.+.... ....
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-----p-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 116 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKN-----Y-NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLY 116 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-----C-SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-----c-chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 466679999999999999999999999653 2 36788999999999 89999999999999999876542 2234
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch--HHHhHHHHHHHHHhhCCH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS--QCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~a~~~~~lg~~~~~~gd~ 144 (233)
+.++.++|.++...|++++|+.+|++++.+ .+. ...++.++|.++...|+.
T Consensus 117 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 117 AIYYLKEGQKFQQAGNIEKAEENYKHATDV------TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHhccHHHHHHHHHHHHhc------CCCcccHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999964 334 567889999999877654
No 81
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.47 E-value=3.1e-12 Score=113.09 Aligned_cols=162 Identities=12% Similarity=0.132 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
..+.++..+|.++...|++++|+.+|++++.+. +. ..++..+|.++. .|++++|+.+|++++++.+..
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~-----~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---- 309 (537)
T 3fp2_A 241 NAALALCYTGIFHFLKNNLLDAQVLLQESINLH-----PT--PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEY---- 309 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CC--HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTC----
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcC-----CC--chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCC----
Confidence 347789999999999999999999999999873 33 678999999999 899999999999999887642
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchH
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQ 165 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e 165 (233)
..++..+|.++...|++++|+.+|++++.+.. ....++..+|.++...|++++|...|++++.... ..
T Consensus 310 --~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~----~~ 377 (537)
T 3fp2_A 310 --PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNP------ENVYPYIQLACLLYKQGKFTESEAFFNETKLKFP----TL 377 (537)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TC
T ss_pred --HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CC
Confidence 35789999999999999999999999997632 2235789999999999999999999999985431 12
Q ss_pred HHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 166 NRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 166 ~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..+...++.++ ..|+++.|...++++
T Consensus 378 ~~~~~~l~~~~~~~g~~~~A~~~~~~a 404 (537)
T 3fp2_A 378 PEVPTFFAEILTDRGDFDTAIKQYDIA 404 (537)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 35677888888 899999999998886
No 82
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.7e-12 Score=113.87 Aligned_cols=167 Identities=13% Similarity=0.107 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
..++..+|.+|...|++++|+.+|++++.+... ...++..+|.++. .|++++|+.+|+++++..+...
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----- 372 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKELDPE------NIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAP----- 372 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSS------CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCS-----
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChh------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCH-----
Confidence 456778888888888888888888888876321 2457888999999 7999999999999998865432
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh---hCCHHHHHHHHHHhhcCCCCCCch
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY---ANDFKQAEKCYNDCSQVDAFLRSD 164 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~---~gd~~~A~~~~~~al~~~~~~~~~ 164 (233)
.++..+|.++...|++++|+.+|++++.+............++..+|.++.. .|++++|...|++++.... .
T Consensus 373 -~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~----~ 447 (514)
T 2gw1_A 373 -EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDP----R 447 (514)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT----T
T ss_pred -HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc----c
Confidence 4788999999999999999999999998876655544446688999999999 9999999999999985431 2
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 165 QNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 165 e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...+...++.++ ..|+.+.|...++++
T Consensus 448 ~~~~~~~la~~~~~~g~~~~A~~~~~~a 475 (514)
T 2gw1_A 448 SEQAKIGLAQMKLQQEDIDEAITLFEES 475 (514)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 245777889988 799999999999998
No 83
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.47 E-value=5.3e-12 Score=109.30 Aligned_cols=170 Identities=12% Similarity=0.047 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH-
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA- 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~- 87 (233)
.++..+|.+|...|++++|+.+|++++.... ....++..+|.++. .|++++|+.+|++++.+.+........
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~ 251 (450)
T 2y4t_A 178 ELRELRAECFIKEGEPRKAISDLKAASKLKN------DNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 251 (450)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 3455566666666666666666666665531 12467788899998 799999999999999775543321111
Q ss_pred -----HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCC
Q 026767 88 -----FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLR 162 (233)
Q Consensus 88 -----~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~ 162 (233)
......+|.++...|++++|+.+|++++.+... +......++..+|.++...|++.+|+..+++++...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~---- 325 (450)
T 2y4t_A 252 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME---- 325 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC----
Confidence 112244599999999999999999999975321 222335678999999999999999999999998542
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
+....++..++.++ ..|+++.|...++++
T Consensus 326 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 355 (450)
T 2y4t_A 326 PDNVNALKDRAEAYLIEEMYDEAIQDYETA 355 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 12357888899988 799999999999999
No 84
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.46 E-value=3.5e-12 Score=95.32 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
....+..+...|.++...|++++|+.+|++++.+.. ....++.++|.++. .|++++|+.+|++++.+.+..
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-- 80 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNP------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY-- 80 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--
Confidence 356788999999999999999999999999998742 23678999999999 799999999999999986532
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..++.++|.++..+|++++|+.+|++++.+.. ....+..+...+..+...|++.+|+..++++.
T Consensus 81 ----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 81 ----IKGYYRRAASNMALGKFRAALRDYETVVKVKP----HDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 35789999999999999999999999997632 22333444666777888999999999998864
No 85
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.46 E-value=5.3e-12 Score=113.29 Aligned_cols=171 Identities=12% Similarity=-0.004 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------------HHHcCCchHHHH--------------HHHHHHHHhh
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASEL--------------YNECGRSQPASD--------------ALAKAARALE 60 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l--------------~~~~g~~~~~a~--------------~l~~lg~~~~ 60 (233)
..++..++.+|...|++++|+..+++++.. |.+.|+...+.. ++..+|.+|.
T Consensus 339 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 418 (597)
T 2xpi_A 339 LDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFA 418 (597)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 346788899999999999999999988743 333344332222 2333344444
Q ss_pred -hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHH
Q 026767 61 -DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYL 139 (233)
Q Consensus 61 -~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~ 139 (233)
.|++++|+++|++++++.+.. ..++..+|.+|...|++++|+.+|++++.+. +....++..+|.++.
T Consensus 419 ~~g~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 419 IEGEHDQAISAYTTAARLFQGT------HLPYLFLGMQHMQLGNILLANEYLQSSYALF------QYDPLLLNELGVVAF 486 (597)
T ss_dssp HHTCHHHHHHHHHHHHHTTTTC------SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCChHHHHHHHHHHH
Confidence 455555555555555443321 1345556666666666666666666665431 112345777788888
Q ss_pred hhCCHHHHHHHHHHhhcCC-C--CCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 140 YANDFKQAEKCYNDCSQVD-A--FLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 140 ~~gd~~~A~~~~~~al~~~-~--~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..|++++|.+.|++++... . ........++..++.++ ..|+++.|...+++.
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 542 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQG 542 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8888888888888776431 1 11122256777778777 678888888888777
No 86
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.46 E-value=5.3e-12 Score=90.16 Aligned_cols=129 Identities=17% Similarity=0.222 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
.++..+|.++...|++++|+.++++++.... ....++..+|.++. .|++++|+.++++++...+.. .
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------~ 69 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS------A 69 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------H
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCC------cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc------h
Confidence 5788999999999999999999999987631 23567888999999 799999999999999875432 2
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
.++..+|.++...|++++|+.++++++.... ....++..+|.++...|++.+|...|++++.
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 4788999999999999999999999987532 2245778999999999999999999999873
No 87
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.46 E-value=1.2e-12 Score=95.34 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+.+.|..+. .|++++|+++|++|+++.+.. ..++.++|.++..+|++++|+..|++++.+ .+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p 78 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN------AILYSNRAACLTKLMEFQRALDDCDTCIRL------DS 78 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHhhHHHhhccHHHHHHHHHHHHHh------hh
Confidence 46788999999999 899999999999999986542 368999999999999999999999999976 23
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
....+++++|.++..+|++++|++.|++++.+
T Consensus 79 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 79 KFIKGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34568999999999999999999999999854
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.45 E-value=2.1e-12 Score=109.51 Aligned_cols=136 Identities=8% Similarity=-0.055 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCch---------HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQ---------PASDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~---------~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
..+.++.++|.+|...|++++|+.+|++|+.+.....+.. ..+.++.++|.++. .|++++|+.+|++|++
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567777788888778888888888888887764443211 12567777777777 6777777777777777
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHH-HHHHHh
Q 026767 77 MLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAE-KCYNDC 154 (233)
Q Consensus 77 ~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~-~~~~~a 154 (233)
+.+.. ..++.++|.+|..+|++++|+.+|++++.+. +....++..++.++...|++.+|. ..|.+.
T Consensus 225 ~~p~~------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 291 (336)
T 1p5q_A 225 LDSNN------EKGLSRRGEAHLAVNDFELARADFQKVLQLY------PNNKAAKTQLAVCQQRIRRQLAREKKLYANM 291 (336)
T ss_dssp HCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75431 2467777777777777777777777777652 222346677777777777777773 344444
No 89
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.45 E-value=2.3e-12 Score=97.65 Aligned_cols=112 Identities=16% Similarity=0.027 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC------chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGR------SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~------~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
.|..+.+.|+.+...|++++|+.+|++|+++-...-+ ...-+.+|.|.|.++. .|++++|+.+|.+|+++|..
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4667788888888888888888888888888755211 1123457888888888 68888888888888887655
Q ss_pred cC--ChHHHHHHH----HHHHHHHHHhccHHHHHHHHHHHHHHHhH
Q 026767 81 DD--KEQMAFDLY----RAATNVYIKLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 81 ~g--~~~~~~~~l----~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 120 (233)
.+ ++. -+.++ ++.|.++..+|+|++|+..|++++++.-+
T Consensus 90 ~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 90 RGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 44 222 23455 78888888888888888888888877544
No 90
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.44 E-value=1.6e-12 Score=112.36 Aligned_cols=160 Identities=8% Similarity=0.021 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 9 AKHMESAAALAKELHN-WREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~-~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
..+|.+.|.++..+|+ +++|+.+|++|+.+.- .-..+|.++|.++. .|++++|+.+|++|+++.+..
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P------~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~----- 199 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP------KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN----- 199 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC-----
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC-----
Confidence 5678999999999997 9999999999999742 34678999999999 899999999999999986643
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh-hCCHHHH-----HHHHHHhhcC-CC
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY-ANDFKQA-----EKCYNDCSQV-DA 159 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~gd~~~A-----~~~~~~al~~-~~ 159 (233)
..++.++|.++..+|++++|+.+|++++.+ .+....+++++|.++.. .|.+++| +.+|++++.+ +.
T Consensus 200 -~~a~~~lg~~~~~~g~~~eAl~~~~~al~l------~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~ 272 (382)
T 2h6f_A 200 -YHAWQHRQWVIQEFKLWDNELQYVDQLLKE------DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPH 272 (382)
T ss_dssp -HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCC
Confidence 358999999999999999999999999976 33445688999999999 5555777 5889998843 32
Q ss_pred CCCchHHHHHHHHHHHH-hcC--CHHHHHHHHhhc
Q 026767 160 FLRSDQNRCATKLISAY-TEG--DVEEIKRVAQSS 191 (233)
Q Consensus 160 ~~~~~e~~~l~~L~~a~-~~g--d~~~a~~~~~~~ 191 (233)
. ..+...++.++ ..| +.+++.+.+++.
T Consensus 273 ~-----~~a~~~l~~ll~~~g~~~~~~a~~~~~~~ 302 (382)
T 2h6f_A 273 N-----ESAWNYLKGILQDRGLSKYPNLLNQLLDL 302 (382)
T ss_dssp C-----HHHHHHHHHHHTTTCGGGCHHHHHHHHHH
T ss_pred C-----HHHHHHHHHHHHccCccchHHHHHHHHHh
Confidence 2 34556666666 445 456666655543
No 91
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.44 E-value=1.1e-11 Score=93.59 Aligned_cols=130 Identities=6% Similarity=-0.069 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
..++..+|.++...|++++|+.++++++... + ....++..+|.++. .|++++|++++++++.+.+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-----~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------ 109 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADA-----P-DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN------ 109 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----C-CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh------
Confidence 5778999999999999999999999999873 1 23577899999999 799999999999999886542
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
..++..+|.++...|++++|+.++++++... +....++..+|.++...|++++|..++++++.
T Consensus 110 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 110 FNVRFRLGVALDNLGRFDEAIDSFKIALGLR------PNEGKVHRAIAFSYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC------ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3578899999999999999999999999763 22356789999999999999999999999873
No 92
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=3e-12 Score=118.35 Aligned_cols=161 Identities=9% Similarity=-0.053 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.+.++...|.+|...|++++|+..|++++.+.- .-+.++.++|.++. .|++++|+.+|++|+++.+..
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~----- 500 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVG------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE----- 500 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-----
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Confidence 356788999999999999999999999998742 23678999999999 899999999999999998764
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~ 166 (233)
..++.++|.++..+|+|++ +.+|++++.+ .+....+++++|.++..+|++++|+..|++++.+. ....
T Consensus 501 -~~~~~~lg~~~~~~g~~~~-~~~~~~al~~------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~----P~~~ 568 (681)
T 2pzi_A 501 -LAPKLALAATAELAGNTDE-HKFYQTVWST------NDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTS----RHFT 568 (681)
T ss_dssp -SHHHHHHHHHHHHHTCCCT-TCHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTS----TTHH
T ss_pred -hHHHHHHHHHHHHcCChHH-HHHHHHHHHh------CCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccC----cccH
Confidence 2578899999999999999 9999999976 23345688999999999999999999999998553 2235
Q ss_pred HHHHHHHHHH-hcCC-----HHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEGD-----VEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd-----~~~a~~~~~~~ 191 (233)
.+...++.++ ..++ .+.+.++.+..
T Consensus 569 ~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l 599 (681)
T 2pzi_A 569 TARLTSAVTLLSGRSTSEVTEEQIRDAARRV 599 (681)
T ss_dssp HHHHHHHHHTC-------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHH
Confidence 5667778777 4443 35555555544
No 93
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=1.3e-11 Score=100.03 Aligned_cols=144 Identities=17% Similarity=0.067 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh---------hCCHHHHHHHHHHHHHHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE---------DAVPEDAIQLYTDACIML 78 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~---------~g~~~~A~~~~~~Al~~~ 78 (233)
...++..+|.+|...|++++|+.+|++++.++... .....++..+|.++. .|++++|+..|+++++.+
T Consensus 51 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 51 AADAQFYLARAYYQNKEYLLAASEYERFIQIYQID---PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC---chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC
Confidence 47889999999999999999999999999986332 245678899999986 589999999999999998
Q ss_pred HhcCChHHHH-----------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh------
Q 026767 79 EEDDKEQMAF-----------DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA------ 141 (233)
Q Consensus 79 ~~~g~~~~~~-----------~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~------ 141 (233)
+.......+. ..+..+|.+|...|+|++|+..|++++.... +......+++.+|.++..+
T Consensus 128 p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p---~~~~~~~a~~~l~~~~~~~g~~~~~ 204 (261)
T 3qky_A 128 PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYP---DTPWADDALVGAMRAYIAYAEQSVR 204 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TSTTHHHHHHHHHHHHHHHHHTSCG
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC---CCchHHHHHHHHHHHHHHhcccchh
Confidence 8765433221 1127899999999999999999999997642 2333566889999999977
Q ss_pred ----CCHHHHHHHHHHhhcC
Q 026767 142 ----NDFKQAEKCYNDCSQV 157 (233)
Q Consensus 142 ----gd~~~A~~~~~~al~~ 157 (233)
|++++|+..|++++..
T Consensus 205 ~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 205 ARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp GGHHHHHHHHHHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHHHHH
Confidence 9999999999999843
No 94
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.42 E-value=6.7e-12 Score=104.31 Aligned_cols=168 Identities=13% Similarity=0.004 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
..+..+|.+|...|++++|+.++++ + ....++..+|.++. .|++++|++.|++++++.+.. . ..
T Consensus 102 ~~~~~la~~~~~~g~~~~Al~~l~~--------~---~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~--~--~~ 166 (291)
T 3mkr_A 102 TFLLMAASIYFYDQNPDAALRTLHQ--------G---DSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDA--T--LT 166 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTT--------C---CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H--HH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHhC--------C---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc--H--HH
Confidence 4566666666667777777766665 1 22346777788888 688888888888888774321 0 01
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRC 168 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~ 168 (233)
........++...|++++|+.+|++++... +....+++++|.++..+|++++|+..|++++... +....+
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~------p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~----p~~~~~ 236 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEMADKC------SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD----SGHPET 236 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHS------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTCHHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCHHH
Confidence 111112233344588888888888888652 2235577888888888899999998888888432 123556
Q ss_pred HHHHHHHH-hcCCHH-HHHHHHhhc-ccccchHHHHH
Q 026767 169 ATKLISAY-TEGDVE-EIKRVAQSS-AISNLDHVIIK 202 (233)
Q Consensus 169 l~~L~~a~-~~gd~~-~a~~~~~~~-~~~~ld~~~~~ 202 (233)
+..++.++ ..|+.. .+..++++. .+.+=++.+..
T Consensus 237 l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 237 LINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 77788766 666664 456777766 34443444433
No 95
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.41 E-value=1.6e-11 Score=106.27 Aligned_cols=168 Identities=11% Similarity=0.119 Sum_probs=131.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 026767 12 MESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDL 90 (233)
Q Consensus 12 ~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~ 90 (233)
+...|.++...|++++|+.+|++++.+.. ....++..+|.+|. .|++++|+.+|++++++.+.. ..+
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~ 213 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCV------WDAELRELRAECFIKEGEPRKAISDLKAASKLKNDN------TEA 213 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSC------HHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHH
Confidence 45557889999999999999999998632 24577899999999 799999999999999986542 358
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch------HHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCch
Q 026767 91 YRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS------QCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSD 164 (233)
Q Consensus 91 l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~------~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~ 164 (233)
+..+|.++...|++++|+.+|++++.+......... ....+..+|.++...|++.+|+..|++++.+.......
T Consensus 214 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 293 (450)
T 2y4t_A 214 FYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEY 293 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHH
Confidence 899999999999999999999999965322111000 00112445999999999999999999998543222222
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 165 QNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 165 e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....+..++.++ ..|+++.|...++++
T Consensus 294 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a 321 (450)
T 2y4t_A 294 TVRSKERICHCFSKDEKPVEAIRVCSEV 321 (450)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 356788889988 899999999999988
No 96
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.41 E-value=1e-11 Score=94.03 Aligned_cols=111 Identities=8% Similarity=-0.061 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEED------DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAAD 119 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~------g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~ 119 (233)
..+..+.+.|..+. .|++++|+.+|++|+++.+.. .....-+.++.++|.++..+|+|++|+..|.++++++.
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 36778899999999 899999999999999999983 21112345999999999999999999999999999854
Q ss_pred Hcc-CcchHHHhH----HHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 120 KCN-ATNSQCKAY----LSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 120 ~~~-~~~~~a~~~----~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+.+ ..+..+.+| ++.|.++..+|++++|+.+|++++.+
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 332 234566777 99999999999999999999999844
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.5e-11 Score=88.51 Aligned_cols=119 Identities=14% Similarity=0.019 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.+..+.+.|..+...|++++|+.+|++++.+.. .-..++.++|.++. .|++++|+.+|++++++.+..
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 71 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF----- 71 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-----
Confidence 456777778877778888888888888877632 22467777787777 688888888888887775432
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVY 138 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~ 138 (233)
..++.++|.++..+|++++|+..|++++.+..+.+..+....+...+..+.
T Consensus 72 -~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 72 -VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 246777788888888888888888887776544333333344444444443
No 98
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.39 E-value=6.5e-12 Score=101.39 Aligned_cols=153 Identities=11% Similarity=-0.066 Sum_probs=118.7
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI 99 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~ 99 (233)
..|++++|+.+|++++... ..+....+.++..+|.++. .|++++|+.+|++++++.+.. ..++..+|.++.
T Consensus 17 ~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~la~~~~ 88 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASR--ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM------PEVFNYLGIYLT 88 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcc--cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHH
Confidence 4578999999999998862 2345578899999999999 899999999999999985532 357899999999
Q ss_pred HhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHHhcC
Q 026767 100 KLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEG 179 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~~~g 179 (233)
..|++++|+.+|++++.+.. ....++..+|.++...|++++|...|++++...... ..... .+...+..|
T Consensus 89 ~~~~~~~A~~~~~~al~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~--~~~~~~~~~ 158 (275)
T 1xnf_A 89 QAGNFDAAYEAFDSVLELDP------TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND--PFRSL--WLYLAEQKL 158 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCT------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHH--HHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCc------cccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC--hHHHH--HHHHHHHhc
Confidence 99999999999999998632 234678999999999999999999999998543211 11111 222223557
Q ss_pred CHHHHHHHHhhc
Q 026767 180 DVEEIKRVAQSS 191 (233)
Q Consensus 180 d~~~a~~~~~~~ 191 (233)
+++.|...+++.
T Consensus 159 ~~~~A~~~~~~~ 170 (275)
T 1xnf_A 159 DEKQAKEVLKQH 170 (275)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 777777777555
No 99
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.38 E-value=9.4e-12 Score=93.81 Aligned_cols=98 Identities=14% Similarity=-0.024 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
-+.++.++|.++...|++++|+.+|++++.+. | .-+.++.++|.++. .|++++|+.+|++|+++.+...
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-----P-~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~---- 104 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-----F-YNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY---- 104 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc----
Confidence 44555566666666666666666666665552 1 23445556666666 5666666666666665554322
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.++.++|.+|..+|++++|+.+|++++.+
T Consensus 105 --~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 105 --TPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34556666666666666666666666654
No 100
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.38 E-value=8.2e-12 Score=105.88 Aligned_cols=163 Identities=13% Similarity=0.073 Sum_probs=125.2
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK---------EQMAFDLY 91 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~---------~~~~~~~l 91 (233)
++++++|+.+|++++... ...+.++.++|.++. .|++++|+.+|++|+.+.+.... ......++
T Consensus 126 L~~~~~A~~~~~~a~~~~------p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~ 199 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEK------LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASH 199 (336)
T ss_dssp EEEEECCCCGGGCCHHHH------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHH------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHH
Confidence 344556666666665542 356888999999999 89999999999999999887641 12224789
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHH
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATK 171 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~ 171 (233)
.++|.++..+|+|++|+.+|++++.+. +....+++++|.++..+|++++|+..|++++.+.. ....+...
T Consensus 200 ~nla~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P----~~~~a~~~ 269 (336)
T 1p5q_A 200 LNLAMCHLKLQAFSAAIESCNKALELD------SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP----NNKAAKTQ 269 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS----SCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC----CCHHHHHH
Confidence 999999999999999999999999872 33467899999999999999999999999985432 12457778
Q ss_pred HHHHH-hcCCHHHHHHHHhhcccccchHHH
Q 026767 172 LISAY-TEGDVEEIKRVAQSSAISNLDHVI 200 (233)
Q Consensus 172 L~~a~-~~gd~~~a~~~~~~~~~~~ld~~~ 200 (233)
|+.++ ..|+.+++....-+-+|..+....
T Consensus 270 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 299 (336)
T 1p5q_A 270 LAVCQQRIRRQLAREKKLYANMFERLAEEE 299 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 88888 688888886554444455444433
No 101
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.38 E-value=8.4e-12 Score=94.05 Aligned_cols=107 Identities=11% Similarity=-0.022 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC------------chHHHHHHHHHHHHhh-hCCHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGR------------SQPASDALAKAARALE-DAVPEDAIQLY 71 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~------------~~~~a~~l~~lg~~~~-~g~~~~A~~~~ 71 (233)
....+..+.+.|+.+...|++++|+.+|++|+.+...... ....+.++.++|.+|. .|++++|+.++
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3455667777777777777777777777777776543221 1223455566666666 56666666666
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 72 TDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 72 ~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
++++++.+.. ..++.++|.++..+|+|++|+..|++++.+
T Consensus 87 ~~al~~~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 87 SEVLKREETN------EKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcc------hHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 6666553221 235556666666666666666666666654
No 102
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.37 E-value=2.6e-11 Score=106.27 Aligned_cols=174 Identities=13% Similarity=0.081 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
....+.++...|..+...|++++|+.+|++++... +. ..++.++|.++. .|++++|+.+|++++++.+..
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-- 72 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELK-----ED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDY-- 72 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----CC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC--
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----cc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHH--
Confidence 45678999999999999999999999999999985 32 678999999999 799999999999999875432
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC----------------------------------------
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA---------------------------------------- 123 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------------------------------------- 123 (233)
..++..+|.++..+|++++|+..|++++.+......
T Consensus 73 ----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 148 (514)
T 2gw1_A 73 ----SKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPA 148 (514)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC-------------------
T ss_pred ----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChh
Confidence 258899999999999999999999998754310000
Q ss_pred ---------------------------------cchHHHhHHHHHHHHHh---hCCHHHHHHHHHHhhc-----CCCC--
Q 026767 124 ---------------------------------TNSQCKAYLSAIIVYLY---ANDFKQAEKCYNDCSQ-----VDAF-- 160 (233)
Q Consensus 124 ---------------------------------~~~~a~~~~~lg~~~~~---~gd~~~A~~~~~~al~-----~~~~-- 160 (233)
.+.....+...|.+++. .|++++|+..|++++. +...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 228 (514)
T 2gw1_A 149 KERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNE 228 (514)
T ss_dssp --------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTT
T ss_pred hHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCcc
Confidence 01225667888888887 8999999999999986 4211
Q ss_pred C---CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 161 L---RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 161 ~---~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
. ......++..++..+ ..|+++.|...++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 263 (514)
T 2gw1_A 229 DEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKA 263 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 1 245577888899988 899999999999988
No 103
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.37 E-value=1.9e-11 Score=108.82 Aligned_cols=138 Identities=9% Similarity=0.010 Sum_probs=114.4
Q ss_pred HHHHHhh-hCCHHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHH
Q 026767 54 KAARALE-DAVPEDAIQLYTDACIMLEED-D-KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQC 128 (233)
Q Consensus 54 ~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g-~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a 128 (233)
+.+..+. +|+|++|+..|++++++.+.. | +....+.+++++|.+|..+|+|++|+.++++++.++++. .+.+..+
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 3344455 799999999999999999874 3 334456799999999999999999999999999998775 3456778
Q ss_pred HhHHHHHHHHHhhCCHHHHHHHHHHhhcCC----CCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 129 KAYLSAIIVYLYANDFKQAEKCYNDCSQVD----AFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 129 ~~~~~lg~~~~~~gd~~~A~~~~~~al~~~----~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.++++||.+|..+|++++|+..|++|+.+. +-+++.....+..|..++ +.+.+..++..++++
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999553 335567777888888888 778788887777665
No 104
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.37 E-value=1.4e-11 Score=92.91 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=88.9
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
......++.++|.++. .|++++|+.+|++++.+.+.. ..++.++|.++..+|+|++|+.+|++++.+.
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~----- 100 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN------VDYIMGLAAIYQIKEQFQQAADLYAVAFALG----- 100 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-----
Confidence 3456788999999999 799999999999999987643 3588999999999999999999999999872
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
+....+++++|.++..+|++++|+.+|++++.+.
T Consensus 101 -P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 101 -KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp -SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 2334578999999999999999999999998554
No 105
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.36 E-value=1e-11 Score=96.63 Aligned_cols=131 Identities=8% Similarity=-0.022 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHH----------HHHHHHHHHHhh-hCCHHHHHHHHHHH
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPA----------SDALAKAARALE-DAVPEDAIQLYTDA 74 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~----------a~~l~~lg~~~~-~g~~~~A~~~~~~A 74 (233)
...+..+...|..+...|++++|+.+|++++.+.....+.... ..++.++|.++. .|++++|+.+|+++
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3456667777777777777777777777777765443332222 466777777777 67777777777777
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHH
Q 026767 75 CIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAE 148 (233)
Q Consensus 75 l~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~ 148 (233)
+.+.+.. ..++.++|.++..+|++++|+.+|++++.+. +....++..++.++...++..++.
T Consensus 115 l~~~p~~------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 115 LKIDKNN------VKALYKLGVANMYFGFLEEAKENLYKAASLN------PNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHSTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHhCccc------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 7764321 2466777777777777777777777777552 122345566677776666666655
No 106
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.35 E-value=8.1e-12 Score=112.61 Aligned_cols=148 Identities=12% Similarity=-0.053 Sum_probs=84.6
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
.|++++|+.+|++++.+.. ..+.++.++|.++. .|++++|+++|++++++.+.. ..++.++|.++..
T Consensus 2 ~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~ 69 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRP------QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH------PEAVARLGRVRWT 69 (568)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC------HHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Confidence 3667777777777766532 22456777777777 677777777777777664432 2466777777777
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hc-
Q 026767 101 LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TE- 178 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~- 178 (233)
+|++++|+.+|++++.+. +....++.++|.++..+|++++|.+.|++++.... ....++..++.++ ..
T Consensus 70 ~g~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p----~~~~~~~~l~~~~~~~~ 139 (568)
T 2vsy_A 70 QQRHAEAAVLLQQASDAA------PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP----EEPYITAQLLNWRRRLC 139 (568)
T ss_dssp TTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHhh
Confidence 777777777777777652 22245667777777777777777777777764321 1234566666666 56
Q ss_pred --CCHHHHHHHHhhc
Q 026767 179 --GDVEEIKRVAQSS 191 (233)
Q Consensus 179 --gd~~~a~~~~~~~ 191 (233)
|+.++|.+.++++
T Consensus 140 ~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 140 DWRALDVLSAQVRAA 154 (568)
T ss_dssp CCTTHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHH
Confidence 7777777777666
No 107
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.35 E-value=1.2e-11 Score=92.53 Aligned_cols=121 Identities=12% Similarity=0.034 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
.......+..+|.+|...|++++|+.+|++++.+. | .-+.++.++|.+|. .|++++|+.+|++++++.+..
T Consensus 27 ~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-----p-~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-- 98 (150)
T 4ga2_A 27 PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-----E-RDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ-- 98 (150)
T ss_dssp HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC--
Confidence 44556677889999999999999999999999983 2 34678999999999 899999999999999986643
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATF-LLRWGLAADKCNATNSQCKAYLSAIIVYLYAND 143 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~-~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd 143 (233)
..++.++|.++...|++++|+.. +++++.+. +....++...+.++...|+
T Consensus 99 ----~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~------P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 99 ----KDLVLKIAELLCKNDVTDGRAKYWVERAAKLF------PGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp ----HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHS------TTCHHHHHHHHHHHHTCCC
T ss_pred ----HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhC------cCCHHHHHHHHHHHHHhCc
Confidence 35899999999999999988776 58999762 2334567777888877775
No 108
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.35 E-value=1.9e-11 Score=92.12 Aligned_cols=108 Identities=17% Similarity=0.128 Sum_probs=91.7
Q ss_pred CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC------------hHHHHHHHHHHHHHHHHhccHHHHHHH
Q 026767 44 RSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK------------EQMAFDLYRAATNVYIKLEKYADAATF 110 (233)
Q Consensus 44 ~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~------------~~~~~~~l~~lg~~~~~~g~~~~A~~~ 110 (233)
+....+..+.+.|..+. .|++++|+.+|.+|+.+++.... ......++.++|.+|..+|+|++|+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 34567889999999999 89999999999999999765321 223446899999999999999999999
Q ss_pred HHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 111 LLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 111 ~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
|++++.+ .+....+++.+|.++..+|++++|...|++++.+
T Consensus 86 ~~~al~~------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 86 SSEVLKR------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhc------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 9999987 3345678999999999999999999999999854
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.33 E-value=2.3e-11 Score=109.61 Aligned_cols=131 Identities=9% Similarity=-0.118 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.+.++.++|.+|...|++++|+.+|++|+++.. ....++.++|.++. .|++++|+++|++++++.+..
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~----- 90 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHP------GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH----- 90 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTST------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-----
Confidence 357899999999999999999999999998732 23678999999999 899999999999999986542
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh---CCHHHHHHHHHHhhc
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA---NDFKQAEKCYNDCSQ 156 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~---gd~~~A~~~~~~al~ 156 (233)
..++.++|.++..+|++++|+++|++++.+. +....++.+++.++..+ |++++|...|++++.
T Consensus 91 -~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 91 -PGIALWLGHALEDAGQAEAAAAAYTRAHQLL------PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHh
Confidence 3588999999999999999999999999762 23356789999999999 999999999999983
No 110
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=8.1e-12 Score=109.02 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=109.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK---EQMAFDLYRAATNV 97 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~---~~~~~~~l~~lg~~ 97 (233)
++..+.++..+++.+....+..+....+.+++.+|.++. .|++++|+++|++|+++++.... ....+.++.++|.+
T Consensus 24 l~~~~~~l~~~e~~~~~~~~~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~ 103 (472)
T 4g1t_A 24 LMEGENSLDDFEDKVFYRTEFQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWV 103 (472)
T ss_dssp TTTTCCCHHHHHHHHHHHTTSCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 456677888888888877777777778899999999999 89999999999999999887642 22234689999999
Q ss_pred HHHhccHHHHHHHHHHHHHHHhHccCc--chHHHhHHHHHHHHHhh--CCHHHHHHHHHHhhcC
Q 026767 98 YIKLEKYADAATFLLRWGLAADKCNAT--NSQCKAYLSAIIVYLYA--NDFKQAEKCYNDCSQV 157 (233)
Q Consensus 98 ~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~a~~~~~lg~~~~~~--gd~~~A~~~~~~al~~ 157 (233)
|..+|+|++|+.+|++++.+....... ...+.++.++|.+++.. ++|++|+.+|++++.+
T Consensus 104 y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~ 167 (472)
T 4g1t_A 104 YYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK 167 (472)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 999999999999999999998876543 23466778888777665 5799999999999844
No 111
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.33 E-value=4.4e-11 Score=90.24 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
....+..+...|.++...|++++|+.+|++++.+.. ....++.++|.+|. .|++++|+.+|++++++.+..
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-- 78 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP------ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-- 78 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--
Confidence 344566666666666666667777766666666532 12456666666666 566666666666666664432
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
..++.++|.++..+|++++|+.+|++++.+.
T Consensus 79 ----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 79 ----SKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 2456666666666666666666666666553
No 112
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.33 E-value=8.2e-11 Score=83.70 Aligned_cols=122 Identities=16% Similarity=0.062 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
....+..+..+|.++...|++++|+.+|++++.... ....++..+|.++. .|++++|+.+|++++.+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-- 79 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNP------ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-- 79 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC--
Confidence 455678888999999999999999999999988732 12567888999988 799999999999999875432
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCH
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~ 144 (233)
..++..+|.++...|++++|+.+|++++.+. +....++..++.++...|++
T Consensus 80 ----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 80 ----SKAYGRMGLALSSLNKHVEAVAYYKKALELD------PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC------ccchHHHHHHHHHHHHHhcC
Confidence 3578889999999999999999999988762 22245678888888888765
No 113
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.32 E-value=3.2e-11 Score=86.50 Aligned_cols=121 Identities=9% Similarity=-0.034 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
......++..+|.++...|++++|+.+|++++.... ....++.++|.++. .|++++|+.+|++++++.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-- 83 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-- 83 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC--
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc--
Confidence 345677889999999999999999999999987632 22678889999998 799999999999999875531
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAND 143 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd 143 (233)
..++.++|.++...|++++|+.+|++++.+. +....++..++.++..+|+
T Consensus 84 ----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 84 ----IKGYTRKAAALEAMKDYTKAMDVYQKALDLD------SSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------GGGTHHHHHHHHHHHHHTC
T ss_pred ----hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC------CCchHHHHHHHHHHHHhcC
Confidence 3578899999999999999999999998762 2234567788888877764
No 114
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.31 E-value=1.2e-10 Score=92.70 Aligned_cols=142 Identities=8% Similarity=-0.115 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-------------------hCCHHHHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-------------------DAVPEDAI 68 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-------------------~g~~~~A~ 68 (233)
...++..+|.+|...|++++|+..|++++..+-..- ....++..+|.++. .|++++|+
T Consensus 40 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~---~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 116 (225)
T 2yhc_A 40 SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP---NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAF 116 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---THHHHHHHHHHHHHHHHC--------------CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC---cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHH
Confidence 457889999999999999999999999998874332 24456666776654 37899999
Q ss_pred HHHHHHHHHHHhcCChHHH-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH
Q 026767 69 QLYTDACIMLEEDDKEQMA-----------FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV 137 (233)
Q Consensus 69 ~~~~~Al~~~~~~g~~~~~-----------~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~ 137 (233)
..|+++++.++.......+ +.....+|.++...|+|.+|+..|+++++.+.. ......++..+|.+
T Consensus 117 ~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~---~~~~~~a~~~l~~~ 193 (225)
T 2yhc_A 117 SDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPD---TQATRDALPLMENA 193 (225)
T ss_dssp HHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC---CCccHHHHHHHHHH
Confidence 9999999998877643321 112257899999999999999999999976432 33445788999999
Q ss_pred HHhhCCHHHHHHHHHHhh
Q 026767 138 YLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 138 ~~~~gd~~~A~~~~~~al 155 (233)
+..+|++++|++.++++.
T Consensus 194 ~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 194 YRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHcCCcHHHHHHHHHHH
Confidence 999999999999999876
No 115
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.31 E-value=8.6e-11 Score=92.46 Aligned_cols=126 Identities=13% Similarity=0.113 Sum_probs=101.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026767 14 SAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYR 92 (233)
Q Consensus 14 ~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~ 92 (233)
++|.+|...|++++|+.+|++++.+. | .-..++.++|.++. .|++++|+.+|++++++.+.. ..++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~ 126 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKA-----P-NNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN------LAANI 126 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC------HHHHH
Confidence 39999999999999999999999984 2 34678999999999 899999999999999987643 35889
Q ss_pred HHHHHHHHhcc--HHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 93 AATNVYIKLEK--YADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 93 ~lg~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
++|.+|...|+ ...+...|.+++ .+.....+++..|.++...|++.+|+.+|++++.+.
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 187 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLS-------SPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF 187 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHh-------CCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 99999987764 445566666553 223333467888999999999999999999998553
No 116
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.31 E-value=4.1e-11 Score=105.73 Aligned_cols=131 Identities=8% Similarity=-0.051 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGR---------SQPASDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~---------~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
..+..+.+.|++|...|++++|+.+|++|+.+...... ....+.++.++|.+|. .|++++|+.+|.+|++
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45566777777777777777777777777776543321 1112455666666666 5666666666666666
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHH
Q 026767 77 MLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEK 149 (233)
Q Consensus 77 ~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~ 149 (233)
+.+.. ..++.++|.+|..+|+|++|+.+|++++.+. +....++..++.++...|++.+|.+
T Consensus 346 ~~p~~------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~------P~~~~a~~~l~~~~~~~~~~~~a~~ 406 (457)
T 1kt0_A 346 LDSAN------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVN------PQNKAARLQISMCQKKAKEHNERDR 406 (457)
T ss_dssp HSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcc------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54431 2456666666666666666666666666431 1222345566666666666665554
No 117
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.30 E-value=1.3e-10 Score=82.80 Aligned_cols=105 Identities=20% Similarity=0.159 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-CCh
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-DKE 84 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g~~ 84 (233)
..+..+..+|.++...|++++|+.+|++++.... ....++.++|.++. .|++++|+.+|++++.+.+.. ++.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 75 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDP------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhH
Confidence 4578899999999999999999999999998742 23578899999999 899999999999999999875 344
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.....++.++|.++...|++++|+.+|++++.+
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 444678999999999999999999999999975
No 118
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.30 E-value=4.2e-11 Score=99.09 Aligned_cols=162 Identities=9% Similarity=-0.069 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
...+...|..+...|++++|+..|++++.+.- ....++..+|.++. .|++++|+..|++++...+. .
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~---~--- 184 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSN------QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD---T--- 184 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS---H---
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCC------cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc---h---
Confidence 45678899999999999999999999998752 23578999999999 89999999999999876542 1
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCCCCchHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAFLRSDQN 166 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~~~~~e~ 166 (233)
.......+..+...++.++|+..|++++.. .+....+++++|.++...|++++|+..|++++.. +.+ .+.
T Consensus 185 ~~~~~~~~~~l~~~~~~~~a~~~l~~al~~------~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~---~~~ 255 (287)
T 3qou_A 185 RYQGLVAQIELLXQAADTPEIQQLQQQVAE------NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA---ADG 255 (287)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG---GGG
T ss_pred HHHHHHHHHHHHhhcccCccHHHHHHHHhc------CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc---ccc
Confidence 235566777788999999999999999975 3344567899999999999999999999999844 433 345
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.+...|+.++ ..|+.+.+...+++.
T Consensus 256 ~a~~~l~~~~~~~g~~~~a~~~~r~a 281 (287)
T 3qou_A 256 QTRXTFQEILAALGTGDALASXYRRQ 281 (287)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 6778889888 689888888877765
No 119
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.30 E-value=2.3e-11 Score=112.41 Aligned_cols=154 Identities=16% Similarity=0.029 Sum_probs=126.7
Q ss_pred HHcCCHHHHHHHHHHHHH-HHHHc-CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 026767 20 KELHNWREVADFYRKASE-LYNEC-GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATN 96 (233)
Q Consensus 20 ~~~g~~~eA~~~~~~A~~-l~~~~-g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~ 96 (233)
...|++++|++.|+++++ .+... ......+.++..+|.++. .|++++|+..|++++++.+.. ..++.++|.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~lg~ 475 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR------WRLVWYRAV 475 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC------HHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch------HHHHHHHHH
Confidence 458999999999999982 11111 112345678899999999 899999999999999987653 358999999
Q ss_pred HHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCCCCchHHHHHHHHHHH
Q 026767 97 VYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAFLRSDQNRCATKLISA 175 (233)
Q Consensus 97 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~~~~~e~~~l~~L~~a 175 (233)
++..+|+|++|+..|++++.+. +....+++++|.++..+|++++ +..|++++.+ +.. ..+...++.+
T Consensus 476 ~~~~~g~~~~A~~~~~~al~l~------P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~-----~~a~~~lg~~ 543 (681)
T 2pzi_A 476 AELLTGDYDSATKHFTEVLDTF------PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV-----ISAAFGLARA 543 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHS------TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC-----HHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch-----HHHHHHHHHH
Confidence 9999999999999999999862 3345678999999999999999 9999999854 322 4578899998
Q ss_pred H-hcCCHHHHHHHHhhc
Q 026767 176 Y-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 176 ~-~~gd~~~a~~~~~~~ 191 (233)
+ ..|++++|...++++
T Consensus 544 ~~~~g~~~~A~~~~~~a 560 (681)
T 2pzi_A 544 RSAEGDRVGAVRTLDEV 560 (681)
T ss_dssp HHHTTCHHHHHHHHHTS
T ss_pred HHHcCCHHHHHHHHHhh
Confidence 8 899999999999999
No 120
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.30 E-value=5e-11 Score=89.92 Aligned_cols=103 Identities=19% Similarity=0.138 Sum_probs=91.0
Q ss_pred CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc
Q 026767 43 GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC 121 (233)
Q Consensus 43 g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 121 (233)
++....+..+..+|.++. .|++++|+.+|++++++.+.. ..++.++|.++..+|+|++|+.+|++++.+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--- 75 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN------PIYLSNRAAAYSASGQHEKAAEDAELATVVD--- 75 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred chhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---
Confidence 455678899999999999 899999999999999987653 3689999999999999999999999999873
Q ss_pred cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 122 NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 122 ~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+....+++++|.++..+|++++|+.+|++++.+
T Consensus 76 ---p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 76 ---PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 234678999999999999999999999999854
No 121
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=6.2e-11 Score=85.23 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+.+.|..+. .|++++|+.+|++++++.+.. ..++.++|.++..+|+|++|+..|++++.+. +
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p 69 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIADCNKAIEKD------P 69 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------T
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------C
Confidence 35678999999999 899999999999999986643 3689999999999999999999999999862 3
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC-CC-CCchHHHHHHHHHHH
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD-AF-LRSDQNRCATKLISA 175 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~-~~-~~~~e~~~l~~L~~a 175 (233)
....+++.+|.++..+|++++|+..|++++.+. .+ .......+...|..+
T Consensus 70 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 70 NFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 346689999999999999999999999998442 22 122334444444443
No 122
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.28 E-value=6.6e-11 Score=101.77 Aligned_cols=132 Identities=12% Similarity=0.013 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC----------CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHH
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECG----------RSQPASDALAKAARALE-DAVPEDAIQLYTDA 74 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g----------~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~A 74 (233)
...+..+.+.|+.+...|++++|+.+|++|+.+..... .....+.++.++|.++. .|++++|+.+|++|
T Consensus 220 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 220 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 34567778888888888888888888888888665431 23345667777777777 67777777777777
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHH
Q 026767 75 CIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEK 149 (233)
Q Consensus 75 l~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~ 149 (233)
+++.+. -..++.++|.+|..+|+|++|+..|++++.+. +....++..++.++...+++.++.+
T Consensus 300 l~~~p~------~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~------P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 300 LEIDPS------NTKALYRRAQGWQGLKEYDQALADLKKAQEIA------PEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HTTCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCch------hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 765432 13466777777777777777777777777652 1123345666666666666665544
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.28 E-value=1.3e-10 Score=86.67 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+..+|.++. .|++++|+.+|++++.+.+.. ..++.++|.++...|++++|+.+|++++.+. +
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~------~ 78 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRTECYGYALGDATRAIELD------K 78 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------T
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------c
Confidence 56788999999999 899999999999999986542 3588999999999999999999999999863 2
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....++..+|.++...|++++|..+|++++..... .........++..+ ..|++++|.......
T Consensus 79 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 79 KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH--DKDAKMKYQECNKIVKQKAFERAIAGDEHK 143 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 33567899999999999999999999999854321 22333334444445 678888888877765
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.28 E-value=2e-10 Score=95.62 Aligned_cols=167 Identities=8% Similarity=-0.006 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
-...+.+.|.++...|++++|...|++++.+. +.....++.+.|.++. .|++++|+..|++|++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 167 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIE-----DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR----- 167 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSS-----SSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC-----
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcc-----ccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----
Confidence 34578888899989999999999999998752 2211137888898888 799999999999998765422
Q ss_pred HHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchH
Q 026767 87 AFDLYRAATNVYI-KLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQ 165 (233)
Q Consensus 87 ~~~~l~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e 165 (233)
..++...+.+.. ..|++++|+.+|++++...- .....+..++.++...|++++|+..|++++....+.....
T Consensus 168 -~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~ 240 (308)
T 2ond_A 168 -HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG------DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKS 240 (308)
T ss_dssp -THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGC
T ss_pred -HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHH
Confidence 123444444433 36999999999999998642 2346778899999999999999999999986432222223
Q ss_pred HHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 166 NRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 166 ~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..+...++... ..|+.+.+....+++
T Consensus 241 ~~l~~~~~~~~~~~g~~~~a~~~~~~a 267 (308)
T 2ond_A 241 GEIWARFLAFESNIGDLASILKVEKRR 267 (308)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45666667666 689999999888887
No 125
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.28 E-value=4.5e-11 Score=91.38 Aligned_cols=160 Identities=9% Similarity=-0.011 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
..+...|..+...|++++|+.+|++++.+.- ....++..+|.++. .|++++|+..|++++...+ +..
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p---~~~--- 74 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQ------SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ---DNS--- 74 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHH------TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC---CHH---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC---ChH---
Confidence 4567788899999999999999999998763 34678999999999 8999999999999987655 211
Q ss_pred HHHHHHHHH-HHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCCCCchHH
Q 026767 89 DLYRAATNV-YIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAFLRSDQN 166 (233)
Q Consensus 89 ~~l~~lg~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~~~~~e~ 166 (233)
....++.+ +...++..+|+..|++++.+ .+....+++.+|.++...|++++|+..|++++.. +.+ .+.
T Consensus 75 -~~~~~~~~~~~~~~~~~~a~~~~~~al~~------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~---~~~ 144 (176)
T 2r5s_A 75 -YKSLIAKLELHQQAAESPELKRLEQELAA------NPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA---QDG 144 (176)
T ss_dssp -HHHHHHHHHHHHHHTSCHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT---TTT
T ss_pred -HHHHHHHHHHHhhcccchHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc---ChH
Confidence 22223333 22334455689999999875 2334567899999999999999999999999854 332 223
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.+...|+.++ ..|+.+.+...++++
T Consensus 145 ~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 145 EVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 5677888888 789999999888876
No 126
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.27 E-value=8.1e-11 Score=91.85 Aligned_cols=130 Identities=9% Similarity=0.010 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+.++|.++. .|++++|+.+|++++. . ...++.++|.++...|++++|+.+|++++.+. +
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------~ 68 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQD------P---HSRICFNIGCMYTILKNMTEAEKAFTRSINRD------K 68 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS------C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------T
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC------C---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------c
Confidence 35566788999999 7999999999999951 1 13589999999999999999999999999763 2
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCC------------CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF------------LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~------------~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
....++.++|.++...|++++|+..|++++..... .......++..++.++ ..|+.+.|...++++
T Consensus 69 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 147 (213)
T 1hh8_A 69 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 147 (213)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 34568899999999999999999999999854321 1234567889999988 899999999999998
No 127
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.26 E-value=3.5e-10 Score=79.70 Aligned_cols=119 Identities=16% Similarity=0.137 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
...+.++..+|.++...|++++|+.+|++++.... ....++..+|.++. .|++++|+.+|++++.+.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--- 76 (125)
T 1na0_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN--- 76 (125)
T ss_dssp -CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc------CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---
Confidence 34466777778887778888888888888776531 12456777777777 678888888888777664321
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhC
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAN 142 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g 142 (233)
..++..+|.++...|++++|+.+|++++.+. +....++..++.++...|
T Consensus 77 ---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 77 ---AEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHhcc
Confidence 2466777777878888888888887777542 122345566666665543
No 128
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.25 E-value=1.6e-10 Score=102.03 Aligned_cols=156 Identities=12% Similarity=0.118 Sum_probs=117.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHH
Q 026767 24 NWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK---------EQMAFDLYRA 93 (233)
Q Consensus 24 ~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~---------~~~~~~~l~~ 93 (233)
++++|+.+|+++.... ...+..+.+.|.++. .|++++|+.+|++|+++.+.... ......++.+
T Consensus 249 ~~~~A~~~~~~~~~~~------~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~n 322 (457)
T 1kt0_A 249 SFEKAKESWEMDTKEK------LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322 (457)
T ss_dssp EEECCCCGGGSCHHHH------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred hcccCcchhhcCHHHH------HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHH
Confidence 3445555555554432 356788999999999 89999999999999999887531 2223578999
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHH
Q 026767 94 ATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLI 173 (233)
Q Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~ 173 (233)
+|.+|.++|+|++|+.+|++++.+. +....+++++|.+|..+|++.+|+..|++++.+.. ....+...++
T Consensus 323 la~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P----~~~~a~~~l~ 392 (457)
T 1kt0_A 323 LAMCYLKLREYTKAVECCDKALGLD------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP----QNKAARLQIS 392 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------CHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcC------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----CCHHHHHHHH
Confidence 9999999999999999999999862 33467899999999999999999999999996532 1234666777
Q ss_pred HHH-hcCCHHHHHHHHhhccccc
Q 026767 174 SAY-TEGDVEEIKRVAQSSAISN 195 (233)
Q Consensus 174 ~a~-~~gd~~~a~~~~~~~~~~~ 195 (233)
.++ ..++.+.+.....+-+|..
T Consensus 393 ~~~~~~~~~~~a~~~~~~~~f~k 415 (457)
T 1kt0_A 393 MCQKKAKEHNERDRRIYANMFKK 415 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 777 5777777766554444443
No 129
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.25 E-value=2.2e-10 Score=100.45 Aligned_cols=124 Identities=10% Similarity=-0.115 Sum_probs=87.9
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHH-cCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-C-ChHHHHHHH
Q 026767 17 ALAKELHNWREVADFYRKASELYNE-CGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-D-KEQMAFDLY 91 (233)
Q Consensus 17 ~~~~~~g~~~eA~~~~~~A~~l~~~-~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g-~~~~~~~~l 91 (233)
.-++.+|++++|+.+|++++.++.+ .|. ....+.++.++|.+|. +|++++|+.+|++++++++.. | +....+..+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 3444578888888888888877654 232 4467778888888888 788888888888888888764 2 344455688
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhHc-c-CcchHHHhHHHHHHHHHh
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAADKC-N-ATNSQCKAYLSAIIVYLY 140 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~ 140 (233)
+++|.+|..+|+|++|+.+|++|+++.+.. | +.+....++.+++.+...
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 888888888888888888888888887664 3 234445555666666543
No 130
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.25 E-value=3.6e-10 Score=80.42 Aligned_cols=126 Identities=19% Similarity=0.241 Sum_probs=103.8
Q ss_pred HHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHH
Q 026767 50 DALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQC 128 (233)
Q Consensus 50 ~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a 128 (233)
.++..+|.++. .|++++|+.+|++++...+.. ..++..+|.++...|++++|+.++++++... +...
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~ 69 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PRSA 69 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTCH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC------CCch
Confidence 46788999999 799999999999999874421 3578889999999999999999999998753 2234
Q ss_pred HhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 129 KAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 129 ~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.++..+|.++...|++.+|...+++++.... ....++..++.++ ..|+++.|...+++.
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~----~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP----RSAEAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 5788999999999999999999999984431 1245677888888 899999999998876
No 131
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.25 E-value=2.6e-10 Score=100.02 Aligned_cols=101 Identities=10% Similarity=-0.016 Sum_probs=75.5
Q ss_pred HcCCHHHHHHHHHHHHHHHHH-cCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNE-CGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-D-KEQMAFDLYRAAT 95 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~-~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g-~~~~~~~~l~~lg 95 (233)
..|+|++|+.+|++++.+..+ .|. ....+.+++++|.+|. +|++++|+.+|++++++++.. | +....+..++++|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 467788888888888888765 333 4467778888888888 788888888888888887764 2 3444556788888
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHhHc
Q 026767 96 NVYIKLEKYADAATFLLRWGLAADKC 121 (233)
Q Consensus 96 ~~~~~~g~~~~A~~~~~~al~~~~~~ 121 (233)
.+|..+|+|++|+.+|++|+++.+..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888877654
No 132
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.24 E-value=2.4e-10 Score=85.37 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
.....++.+.|.++...|++++|+.+|++++.+. + .-..++.++|.++. .|++++|+.+|++++.+.+...
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-- 89 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-----H-YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP-- 89 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT--
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-----c-ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc--
Confidence 3445667777777777777777777777777652 1 23456677777777 6777777777777777655322
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAAD 119 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~ 119 (233)
.++.++|.++..+|++++|+.+|++++.+..
T Consensus 90 ----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 90 ----RFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp ----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ----hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 3567777777777777777777777776643
No 133
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.23 E-value=1.1e-10 Score=96.32 Aligned_cols=165 Identities=12% Similarity=0.021 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+...|..+...|++++|+.+|++|+.+. + ..+.++.++|.++. .|++++|+..|++++++.+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRN-----P-LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS------ 71 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----S-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC------
Confidence 5788999999999999999999999999973 2 24678999999999 899999999999999875432
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch-HH------------------------HhHHHHHHHHHhhC
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS-QC------------------------KAYLSAIIVYLYAN 142 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~a------------------------~~~~~lg~~~~~~g 142 (233)
..++.++|.++..+|++++|+.+|++++.+......... .. .....++. +..|
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~ 149 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAA 149 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHH
Confidence 358899999999999999999999999988654321111 00 01111222 2357
Q ss_pred CHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-h-cCCHHHHHHHHhhc
Q 026767 143 DFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-T-EGDVEEIKRVAQSS 191 (233)
Q Consensus 143 d~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~-~gd~~~a~~~~~~~ 191 (233)
++++|++.+++++.... ........+...+ . .+..+.+.+.+.++
T Consensus 150 ~~~~A~~~~~~al~~~p----~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a 196 (281)
T 2c2l_A 150 ERERELEECQRNHEGHE----DDGHIRAQQACIEAKHDKYMADMDELFSQV 196 (281)
T ss_dssp HHHHHHTTTSGGGTTTS----CHHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhcccc----chhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888888888774421 2223333444433 2 35566677776655
No 134
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.22 E-value=2.5e-10 Score=85.24 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=87.2
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
......++.++|.++. .|++++|+.+|++++.+.+.. ..++.++|.++..+|+|++|+.+|++++.+.
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~----- 85 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMD----- 85 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-----
Confidence 3456778899999999 899999999999999886542 3578899999999999999999999999762
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+....+++++|.++..+|++++|+.+|++++.+
T Consensus 86 -p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 86 -IXEPRFPFHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp -TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 233467899999999999999999999999844
No 135
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.21 E-value=1.4e-10 Score=90.13 Aligned_cols=154 Identities=10% Similarity=0.042 Sum_probs=106.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH-----
Q 026767 13 ESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM----- 86 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~----- 86 (233)
.+.+......|+++++.+.++....- ....+..+.++|.++. .|++++|+.+|.+++.+.+...+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 81 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYTDEE------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLD 81 (198)
T ss_dssp --------------CCCSGGGCCHHH------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHH
T ss_pred cchhhhhhhhhhccccCchhhCCHHH------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 34445555567777766666544322 3456788999999999 89999999999999998776542211
Q ss_pred -----HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCC
Q 026767 87 -----AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFL 161 (233)
Q Consensus 87 -----~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~ 161 (233)
...++.++|.++..+|+|++|+.+|++++.+. +....+++.+|.++..+|++++|+..|++++.+...
T Consensus 82 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~- 154 (198)
T 2fbn_A 82 KKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID------KNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN- 154 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-
Confidence 13689999999999999999999999999862 234578999999999999999999999999854321
Q ss_pred CchHHHHHHHHHHHH-hcCCHH
Q 026767 162 RSDQNRCATKLISAY-TEGDVE 182 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~-~~gd~~ 182 (233)
...+...++.++ ..++..
T Consensus 155 ---~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 155 ---NLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp ---CHHHHHHHHHHHHHHHHHH
T ss_pred ---cHHHHHHHHHHHHHHHHHH
Confidence 134455555555 334333
No 136
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.21 E-value=2.3e-10 Score=87.06 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=98.7
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH-
Q 026767 20 KELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNV- 97 (233)
Q Consensus 20 ~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~- 97 (233)
...|++++|+.++++++... + ....++..+|.++. .|++++|+.+|++++.+.+.. ..++.++|.+
T Consensus 21 ~~~~~~~~A~~~~~~al~~~-----p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~l 88 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRAN-----P-QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN------AELYAALATVL 88 (177)
T ss_dssp C-----CCCCHHHHHHHHHC-----C-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC------HHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHhC-----C-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHH
Confidence 34688999999999999864 2 23578999999999 899999999999999998653 3578899999
Q ss_pred HHHhccH--HHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 98 YIKLEKY--ADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 98 ~~~~g~~--~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
+...|++ ++|+.+|++++.+. +....++..+|.++...|++.+|...|++++...
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 89 YYQASQHMTAQTRAMIDKALALD------SNEITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHhcCCcchHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 8899999 99999999999762 2335678999999999999999999999998543
No 137
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.21 E-value=5.3e-10 Score=79.53 Aligned_cols=106 Identities=13% Similarity=0.098 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc-Cc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN-AT 124 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~ 124 (233)
..+.++..+|.++. .|++++|+.+|++++.+.+.. ..++.++|.++...|++++|+.+|++++.+..... ..
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 75 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhH
Confidence 35778999999999 799999999999999986432 35789999999999999999999999999876542 22
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
.....++..+|.++...|++.+|..+|++++...
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3336788999999999999999999999998553
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.21 E-value=2.7e-10 Score=94.80 Aligned_cols=162 Identities=14% Similarity=0.070 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-HHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHH
Q 026767 9 AKHMESAAALAK-------ELHNW-------REVADFYRKASE-LYNECGRSQPASDALAKAARALE-DAVPEDAIQLYT 72 (233)
Q Consensus 9 a~~~~~~g~~~~-------~~g~~-------~eA~~~~~~A~~-l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~ 72 (233)
..++.+.|.++. ..|++ ++|+..|++|+. +. + .-..++.+.|.++. .|++++|+..|+
T Consensus 50 ~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~-----p-~~~~~~~~~~~~~~~~~~~~~A~~~~~ 123 (308)
T 2ond_A 50 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL-----K-KNMLLYFAYADYEESRMKYEKVHSIYN 123 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTT-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhC-----c-ccHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 345667777665 35886 899999999988 42 2 34568899999999 799999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHH-hhCCHHHHHHHH
Q 026767 73 DACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYL-YANDFKQAEKCY 151 (233)
Q Consensus 73 ~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~gd~~~A~~~~ 151 (233)
+++++.+... ..++.++|.++.+.|++++|+..|++++... +....++...+.+.. ..|++++|+..|
T Consensus 124 ~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------p~~~~~~~~~a~~~~~~~~~~~~A~~~~ 192 (308)
T 2ond_A 124 RLLAIEDIDP-----TLVYIQYMKFARRAEGIKSGRMIFKKAREDA------RTRHHVYVTAALMEYYCSKDKSVAFKIF 192 (308)
T ss_dssp HHHTSSSSCT-----HHHHHHHHHHHHHHHCHHHHHHHHHHHHTST------TCCTHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHhccccCc-----cHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9998644321 1278899999999999999999999998642 122445555555543 379999999999
Q ss_pred HHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 152 NDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 152 ~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++++.... ....+...++..+ ..|+.+.|+..++++
T Consensus 193 ~~al~~~p----~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 229 (308)
T 2ond_A 193 ELGLKKYG----DIPEYVLAYIDYLSHLNEDNNTRVLFERV 229 (308)
T ss_dssp HHHHHHHT----TCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHhCC----CcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99985421 2356778888887 789999999999999
No 139
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.21 E-value=6.5e-10 Score=98.28 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-----CCHHHHHHHHHHHHHHHH
Q 026767 10 KHMESAAALAKE----LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-----AVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 10 ~~~~~~g~~~~~----~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-----g~~~~A~~~~~~Al~~~~ 79 (233)
.++.++|.+|.. .+++++|+.+|++|++. |+ ..++.++|.+|. . +++++|+.+|++|++.
T Consensus 256 ~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~----~~----~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~-- 325 (490)
T 2xm6_A 256 IAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ----GN----SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ-- 325 (490)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT----TC----HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--
Confidence 455566666666 66777777777776542 33 346778888887 4 6899999999998864
Q ss_pred hcCChHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHHH
Q 026767 80 EDDKEQMAFDLYRAATNVYIKLE---KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCYN 152 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~~ 152 (233)
++ ..++.++|.+|...| ++++|+.+|+++++. +...+++++|.+|.. .+++.+|..+|+
T Consensus 326 --~~----~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~ 391 (490)
T 2xm6_A 326 --GD----ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMR 391 (490)
T ss_dssp --TC----HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred --CC----HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 32 247888999998855 899999999999853 235678999999999 899999999999
Q ss_pred HhhcCCCCCCchHHHHHHHHHHHH-h----cCCHHHHHHHHhhc
Q 026767 153 DCSQVDAFLRSDQNRCATKLISAY-T----EGDVEEIKRVAQSS 191 (233)
Q Consensus 153 ~al~~~~~~~~~e~~~l~~L~~a~-~----~gd~~~a~~~~~~~ 191 (233)
+++... ...+...|+..| . .+|.+.|...++++
T Consensus 392 ~A~~~~------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 429 (490)
T 2xm6_A 392 KAAEQG------LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTA 429 (490)
T ss_dssp HHHHTT------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHhCC------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 997532 256788899988 4 68999999999998
No 140
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.20 E-value=9.4e-10 Score=81.03 Aligned_cols=99 Identities=11% Similarity=0.092 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
....+...|.++...|++++|+.+|++++.+. + ....++.++|.++. .|++++|+.+|++++.+.+...
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-----p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---- 86 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-----H-YDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP---- 86 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT----
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-----C-ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc----
Confidence 34455555555555666666666666655542 1 12344555566555 4666666666666655543321
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
.++.++|.++..+|++++|+.+|++++.+.
T Consensus 87 --~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 87 --RFPFHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp --HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 245555666666666666666666665543
No 141
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.19 E-value=1.9e-10 Score=98.90 Aligned_cols=131 Identities=14% Similarity=0.083 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC----------ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD----------KEQMAFDLYRAATNVYIKLEKYADAATFLLRWG 115 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g----------~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al 115 (233)
..+..+.++|..+. .|++++|+.+|++|+++..... .......++.++|.++.++|+|++|+.+|++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 35677899999999 8999999999999999876641 233445799999999999999999999999999
Q ss_pred HHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHH
Q 026767 116 LAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRV 187 (233)
Q Consensus 116 ~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~ 187 (233)
.+ .+....+++.+|.++..+|++++|+..|++++.+... ...+...|+.++ ..++.+++...
T Consensus 301 ~~------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~----~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 301 EI------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE----DKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TT------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred Hh------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 2345678999999999999999999999999854321 234556666666 45555555443
No 142
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.19 E-value=5.8e-10 Score=80.74 Aligned_cols=100 Identities=16% Similarity=0.060 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+..+|.++...|++++|+.+|++++.+.. ....++.++|.++. .|++++|+.+|++++.+.+..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------ 76 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS------ 76 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc------CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh------
Confidence 56667777777777777777777777776632 12456777777777 677777777777777665431
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 120 (233)
..++.++|.++..+|++++|+.+|++++.+...
T Consensus 77 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 77 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 246667777777777777777777777766544
No 143
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.19 E-value=6.4e-12 Score=111.60 Aligned_cols=129 Identities=14% Similarity=0.039 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
...+.++.++|.++...|++++|+.+|++|+++. + ..+.++.++|.++. .|++++|+++|++|+++.+..
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~-----p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~--- 73 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELN-----P-SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY--- 73 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----C-ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---
Confidence 3456777888899999999999999999999983 2 23788999999999 899999999999999985432
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH--HHhhCCHHHHHHHHH
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV--YLYANDFKQAEKCYN 152 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~--~~~~gd~~~A~~~~~ 152 (233)
..++.++|.+|..+|++++|+.+|++++.+... ...++..++.+ +..+|++++|++.++
T Consensus 74 ---~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~------~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 74 ---IKGYYRRAASNMALGKFRAALRDYETVVKVKPH------DKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp ---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT------CTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 358999999999999999999999999986321 12345666666 888999999999999
No 144
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.18 E-value=1.4e-09 Score=96.21 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhh-----CCHHHHHHHHHHHHHHHH
Q 026767 9 AKHMESAAALAKE----LHNWREVADFYRKASELYNECGRSQPASDALAKAARALED-----AVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 9 a~~~~~~g~~~~~----~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~-----g~~~~A~~~~~~Al~~~~ 79 (233)
+.++..+|.+|.. .+++++|+.+|++|++. |+ +.++..+|.+|.. +++++|+++|++|++.
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-- 108 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ----GY----TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-- 108 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--
Confidence 4566667777766 66777777777777642 32 3455566666552 4666666666666542
Q ss_pred hcCChHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHH
Q 026767 80 EDDKEQMAFDLYRAATNVYIK----LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCY 151 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~ 151 (233)
|+ ..++.++|.+|.. .+++++|+.+|+++++. +...++.++|.+|.. .+++.+|.+.|
T Consensus 109 --~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~ 174 (490)
T 2xm6_A 109 --GL----PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--------GRDSGQQSMGDAYFEGDGVTRDYVMAREWY 174 (490)
T ss_dssp --TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred --CC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence 21 1345556666655 55666666666665431 123344555555554 45555555555
Q ss_pred HHhh
Q 026767 152 NDCS 155 (233)
Q Consensus 152 ~~al 155 (233)
++++
T Consensus 175 ~~a~ 178 (490)
T 2xm6_A 175 SKAA 178 (490)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 145
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.18 E-value=3.4e-10 Score=89.38 Aligned_cols=139 Identities=16% Similarity=0.066 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhc--
Q 026767 26 REVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLE-- 102 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g-- 102 (233)
.+|+.+|+++.+. |+ +.++.++|.+|. .+++++|+.+|++|++. |+ ..++.++|.+|.. +
T Consensus 3 ~eA~~~~~~aa~~----g~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----g~----~~a~~~lg~~y~~-~g~ 65 (212)
T 3rjv_A 3 TEPGSQYQQQAEA----GD----RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----GD----GDALALLAQLKIR-NPQ 65 (212)
T ss_dssp -CTTHHHHHHHHT----TC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TC----HHHHHHHHHHTTS-STT
T ss_pred chHHHHHHHHHHC----CC----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHc-CCC
Confidence 4678888888864 44 567899999999 79999999999999864 33 3678999999998 7
Q ss_pred --cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH
Q 026767 103 --KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY 176 (233)
Q Consensus 103 --~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~ 176 (233)
++++|+.+|+++++. +...+++++|.+|.. .+|+.+|+.+|++++..... .....+...|+..|
T Consensus 66 ~~~~~~A~~~~~~A~~~--------g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~--~~~~~a~~~Lg~~y 135 (212)
T 3rjv_A 66 QADYPQARQLAEKAVEA--------GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES--DAAVDAQMLLGLIY 135 (212)
T ss_dssp SCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS--HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC--cchHHHHHHHHHHH
Confidence 999999999999642 345678999999998 89999999999999754310 12367888999988
Q ss_pred -h----cCCHHHHHHHHhhc
Q 026767 177 -T----EGDVEEIKRVAQSS 191 (233)
Q Consensus 177 -~----~gd~~~a~~~~~~~ 191 (233)
. .+|.++|...++++
T Consensus 136 ~~g~g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 136 ASGVHGPEDDVKASEYFKGS 155 (212)
T ss_dssp HHTSSSSCCHHHHHHHHHHH
T ss_pred HcCCCCCCCHHHHHHHHHHH
Confidence 5 67999999999998
No 146
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.18 E-value=3.7e-10 Score=80.80 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=94.2
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
.......+..+|.++. .|++++|+.+|++++++.+.. ..++.++|.++...|++++|+.+|++++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~----- 80 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD------AKLYSNRAACYTKLLEFQLALKDCEECIQLE----- 80 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-----
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----
Confidence 4456788999999999 899999999999999875432 3689999999999999999999999999762
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY 176 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~ 176 (233)
+....++..+|.++...|++++|+.+|++++.... ....+...++.++
T Consensus 81 -~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p----~~~~~~~~l~~~~ 128 (133)
T 2lni_A 81 -PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDS----SCKEAADGYQRCM 128 (133)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG----GGTHHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC----CchHHHHHHHHHH
Confidence 23456789999999999999999999999984431 1234555666655
No 147
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.17 E-value=3.2e-10 Score=83.61 Aligned_cols=101 Identities=15% Similarity=0.102 Sum_probs=86.6
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
.......+.++|.++. .|++++|+.+|++++.+.+.. ..++..+|.++..+|+|++|+.+|++++.+.
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----- 82 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD------ARYFLGLGACRQSLGLYEQALQSYSYGALMD----- 82 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-----
Confidence 3456778889999999 899999999999999876542 3578899999999999999999999999862
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+....+++++|.++..+|++++|+..|++++.+
T Consensus 83 -p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 83 -INEPRFPFHAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp -TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 233457899999999999999999999999844
No 148
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.17 E-value=1.1e-09 Score=96.28 Aligned_cols=150 Identities=16% Similarity=0.121 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhh-----CCHHHHHHHHHHHHHHHHhcC
Q 026767 11 HMESAAALAKELH---NWREVADFYRKASELYNECGRSQPASDALAKAARALED-----AVPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 11 ~~~~~g~~~~~~g---~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~-----g~~~~A~~~~~~Al~~~~~~g 82 (233)
++.++|.+|...| ++++|+.+|++|++. |+. .+..+.++|.+|.. +++++|+.+|++|+ . |
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~----g~~--~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~--g 246 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSR----GTV--TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---P--G 246 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT----TCS--CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---G--G
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHC----CCH--HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---C--C
Confidence 6788888888888 888999999888753 433 34456777877773 47788888888876 2 2
Q ss_pred ChHHHHHHHHHHHHH-H--HHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhC-----CHHHHHHHHHHh
Q 026767 83 KEQMAFDLYRAATNV-Y--IKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAN-----DFKQAEKCYNDC 154 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~-~--~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g-----d~~~A~~~~~~a 154 (233)
+ ..++.++|.+ + ...+++++|+.+|+++++. +...+++++|.+|. .| |+.+|...|+++
T Consensus 247 ~----~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~A 313 (452)
T 3e4b_A 247 Y----PASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--------DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKA 313 (452)
T ss_dssp S----THHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTT
T ss_pred C----HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHH
Confidence 2 2467777777 3 4567888888888877632 13445667777776 45 777777777776
Q ss_pred hcCCCCCCchHHHHHHHHHHHHhcC-----CHHHHHHHHhhc
Q 026767 155 SQVDAFLRSDQNRCATKLISAYTEG-----DVEEIKRVAQSS 191 (233)
Q Consensus 155 l~~~~~~~~~e~~~l~~L~~a~~~g-----d~~~a~~~~~~~ 191 (233)
. + +...+...||..|..| |.++|...++++
T Consensus 314 a--~-----g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A 348 (452)
T 3e4b_A 314 V--G-----REVAADYYLGQIYRRGYLGKVYPQKALDHLLTA 348 (452)
T ss_dssp T--T-----TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHH
T ss_pred h--C-----CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHH
Confidence 5 2 1234445555555333 555555555554
No 149
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.17 E-value=6.2e-10 Score=80.61 Aligned_cols=98 Identities=14% Similarity=0.021 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS 126 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 126 (233)
.+..+..+|.++. .|++++|+.+|++++.+.+.. ..++.++|.++..+|++++|+.+|++++.+. +.
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------p~ 75 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALELD------GQ 75 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------ch
Confidence 4678899999999 899999999999999986642 3589999999999999999999999999763 23
Q ss_pred HHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 127 QCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 127 ~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
...+++.+|.++...|++.+|+..|++++.+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 76 SVKAHFFLGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4568899999999999999999999999843
No 150
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.16 E-value=8.7e-10 Score=96.72 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=86.7
Q ss_pred hCCHHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHHHhHHHHHH
Q 026767 61 DAVPEDAIQLYTDACIMLEED-D-KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQCKAYLSAII 136 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~~-g-~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~ 136 (233)
.|+|++|+..|++++++.+.. | +....+.+++++|.+|..+|+|++|+.++++++.+.++. .+.+..+..+++||.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 589999999999999999874 3 334556799999999999999999999999999998875 345778889999999
Q ss_pred HHHhhCCHHHHHHHHHHhhcCC
Q 026767 137 VYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 137 ~~~~~gd~~~A~~~~~~al~~~ 158 (233)
+|..+|++++|+..|++|+.+.
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHH
Confidence 9999999999999999998654
No 151
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.16 E-value=1.2e-09 Score=90.52 Aligned_cols=129 Identities=8% Similarity=0.062 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH----HHhh-hCCHHHHHHHHHHHHHHHHhcCC
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAA----RALE-DAVPEDAIQLYTDACIMLEEDDK 83 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg----~~~~-~g~~~~A~~~~~~Al~~~~~~g~ 83 (233)
..++..+|.+|..+|++++|+..|++++.+. +... +.+++ .++. .|++++|+..|+++++.++..
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~-----p~~~---~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~-- 199 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQD-----EDAT---LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPT-- 199 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCC--
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-----cCcH---HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCc--
Confidence 3578889999999999999999999999873 2211 22222 2333 589999999999999985531
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHH-HHHHHHHhhcC
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQ-AEKCYNDCSQV 157 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~-A~~~~~~al~~ 157 (233)
..+++++|.++..+|++++|+.+|++++.+ .+..+.++.++|.++...|++.+ +.+++++++.+
T Consensus 200 ----~~~~~~la~~~~~~g~~~eA~~~l~~al~~------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~ 264 (291)
T 3mkr_A 200 ----LLLLNGQAACHMAQGRWEAAEGVLQEALDK------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDA 264 (291)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 358999999999999999999999999976 23445679999999999999976 57888998843
No 152
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.15 E-value=6.3e-10 Score=97.52 Aligned_cols=127 Identities=13% Similarity=-0.040 Sum_probs=103.1
Q ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcc
Q 026767 50 DALAKAARALEDAVPEDAIQLYTDACIMLEED-D-KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC--NATN 125 (233)
Q Consensus 50 ~~l~~lg~~~~~g~~~~A~~~~~~Al~~~~~~-g-~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 125 (233)
..+..+..+..+|++++|+..|++++++.... | +....+.+++++|.+|..+|+|++|+.++++++.++++. .+.+
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 34455555666899999999999999987653 3 333456799999999999999999999999999999875 4556
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC----CCCchHHHHHHHHHHHH
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA----FLRSDQNRCATKLISAY 176 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~----~~~~~e~~~l~~L~~a~ 176 (233)
..+..+++||.+|..+|++++|+..|++|+.+.. -+++....++..|..+.
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECD 423 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 7788899999999999999999999999985532 34566666777777665
No 153
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.15 E-value=1.9e-09 Score=76.48 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=96.4
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
....+.++..+|.++. .|++++|+.+|++++.+.+.. ..++..+|.++...|++++|+.++++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~----- 76 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN------AVYFCNRAAAYSKLGNYAGAVQDCERAICID----- 76 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-----
Confidence 3456788999999999 799999999999999885532 3578999999999999999999999999762
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGD 180 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd 180 (233)
+....++..+|.++...|++++|...|++++.... ....+...++.++ ..|+
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p----~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 77 -PAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP----DNETYKSNLKIAELKLRE 129 (131)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST----TCHHHHHHHHHHHHHHTT
T ss_pred -ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc----cchHHHHHHHHHHHHHhc
Confidence 22356789999999999999999999999985431 1234556677666 4454
No 154
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.14 E-value=1.2e-09 Score=76.21 Aligned_cols=95 Identities=11% Similarity=0.003 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+...|.++...|++++|+.+|++++.... ....++.++|.++. .|++++|+.++++++++.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------ 71 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDP------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW------ 71 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc------
Confidence 34455555555555555555555555554421 11334455555555 455555555555555543221
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWG 115 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al 115 (233)
..++.++|.++...|++++|+.+|++++
T Consensus 72 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 72 GKGYSRKAAALEFLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1344455555555555555555555554
No 155
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.14 E-value=1.9e-09 Score=75.78 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=91.5
Q ss_pred chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 45 SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 45 ~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
+...+.++..+|.++. .|++++|+.+|++++...+.. ..++..+|.++...|++++|+.+|++++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~----- 73 (125)
T 1na0_A 5 PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD----- 73 (125)
T ss_dssp --CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----
Confidence 4455788999999999 799999999999999875432 3578899999999999999999999998752
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY 176 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~ 176 (233)
+....++..+|.++...|++++|...|++++.... ....+...++.++
T Consensus 74 -~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~~~~~~~~l~~~~ 121 (125)
T 1na0_A 74 -PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP----NNAEAKQNLGNAK 121 (125)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----TCHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC----CcHHHHHHHHHHH
Confidence 22345788999999999999999999999984431 1234555566554
No 156
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.12 E-value=4.1e-09 Score=73.37 Aligned_cols=99 Identities=18% Similarity=0.195 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS 126 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 126 (233)
.+..+..+|.++. .|++++|+.+|++++...+.. ..++.++|.++...|++++|+.++++++.+. +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~ 70 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK------PD 70 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TT
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhC------cc
Confidence 4677889999999 799999999999999886542 3578999999999999999999999999762 22
Q ss_pred HHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 127 QCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 127 ~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
...++..+|.++...|++++|...|++++...
T Consensus 71 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 71 WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 35678999999999999999999999998543
No 157
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.11 E-value=6e-10 Score=80.28 Aligned_cols=93 Identities=11% Similarity=-0.036 Sum_probs=62.6
Q ss_pred HHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHh
Q 026767 52 LAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKA 130 (233)
Q Consensus 52 l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~ 130 (233)
+..+|.++. .|++++|+..|++++++.+.. ..++..+|.++...|++++|+.+|++++.+. +....+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~~~~~ 87 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPER------EEAWRSLGLTQAENEKDGLAIIALNHARMLD------PKDIAV 87 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHH
Confidence 455666666 677777777777777765532 2466677777777777777777777777651 222345
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 131 YLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 131 ~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+..+|.++...|++++|+..|++++.
T Consensus 88 ~~~la~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 88 HAALAVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67777777777777777777777763
No 158
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.09 E-value=5.3e-10 Score=80.55 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
...+...|.++...|++++|+.+|++++.+. + .-+.++..+|.++. .|++++|+.+|++|+++.+..
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----P-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------ 84 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKE-----P-EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD------ 84 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Confidence 3456778899999999999999999999874 2 24678899999999 899999999999999987653
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
..++.++|.++...|++++|+.+|++++.+
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 247899999999999999999999999865
No 159
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=3.5e-09 Score=77.14 Aligned_cols=100 Identities=13% Similarity=-0.029 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+...|..+...|++++|+.+|++++.+. .+......++.++|.++. .|++++|+.+|++++.+.+..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------ 98 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLD---ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD------ 98 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc---ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC------
Confidence 4555556666666666666666666665432 111123455555555555 456666666665555553321
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
..++.++|.++...|++++|+.+|++++.+
T Consensus 99 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 99 VKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 234555555555556666666555555543
No 160
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.09 E-value=6.1e-11 Score=100.59 Aligned_cols=117 Identities=12% Similarity=0.004 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 6 WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 6 ~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
...+..+.+.|+.+...|++++|+.+|++|+.+.... . .+. .+++.++...+.
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~-----~---------~~~~~~~~~~~~~~l~------------ 229 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDD-----F---------MFQLYGKYQDMALAVK------------ 229 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHH-----H---------HHTCCHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccc-----h---------hhhhcccHHHHHHHHH------------
Confidence 4567777788888888888888888888887764211 0 112 233333322211
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
..++.++|.+|..+|+|++|+.+|++++.+. +....+++++|.+|..+|++++|+..|++++.+
T Consensus 230 ---~~~~~nla~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 230 ---NPCHLNIAACLIKLKRYDEAIGHCNIVLTEE------EKNPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp ---THHHHHHHHHHHTTTCCHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 1366777777777777777777777777642 233456777777777777777777777777744
No 161
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.08 E-value=2.4e-09 Score=76.61 Aligned_cols=103 Identities=15% Similarity=0.004 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
.++.+.|.++...|++++|+.+|++++..+. +......++..+|.++. .|++++|+.+|++++...+.... ..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~ 76 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYP---NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK---AA 76 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---HH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCC---CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc---cH
Confidence 3466788888889999999999998887653 23334577888999988 79999999999999887765432 23
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
.++..+|.++..+|++++|+.+|++++...
T Consensus 77 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 77 GGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 578889999999999999999999888754
No 162
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.07 E-value=4.6e-10 Score=85.72 Aligned_cols=131 Identities=9% Similarity=0.012 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh--hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE--DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~--~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
-..++..+|.++...|++++|+.+|++++.... ++ ..+...+.+.. .++..+|+..|++++++.+..
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p---~~----~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~---- 107 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQ---DN----SYKSLIAKLELHQQAAESPELKRLEQELAANPDN---- 107 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC---CH----HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTC----
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC---Ch----HHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCC----
Confidence 457889999999999999999999999876542 21 22222333322 334446899999999886642
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..++.++|.++...|++++|+.+|++++.. ........++..+|.++..+|++++|...|++++
T Consensus 108 --~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 108 --FELACELAVQYNQVGRDEEALELLWNILKV----NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcccHHHHHHHHHHHHHh----CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 357899999999999999999999999854 2222334578999999999999999999999986
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=1e-10 Score=81.52 Aligned_cols=96 Identities=10% Similarity=-0.039 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+.++.++|.++...|++++|+.+|++|+.+.. ....++.++|.++. .|++++|+.+|++++++.+..++....
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 77 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQP------QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIR 77 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHH
Confidence 45556666666666666666666666665521 12445556666666 566666666666666655555444444
Q ss_pred HHHHHHHHHHHHHhccHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATF 110 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~ 110 (233)
..++..+|.++..+|+++.|+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~a~~~ 100 (111)
T 2l6j_A 78 SKLQYRLELAQGAVGSVQIPVVE 100 (111)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSS
T ss_pred HHHHHHHHHHHHHHHhHhhhHhH
Confidence 45555666666655555554443
No 164
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.03 E-value=3.6e-09 Score=75.66 Aligned_cols=101 Identities=9% Similarity=-0.017 Sum_probs=84.3
Q ss_pred HHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHH
Q 026767 51 ALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCK 129 (233)
Q Consensus 51 ~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~ 129 (233)
++.++|.++. .|++++|+..|++++...+... ....++..+|.++...|+|++|+.+|++++.... +......
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~ 77 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGV---YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP---THDKAAG 77 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST---THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TSTTHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc---ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC---CCcccHH
Confidence 4677888888 7999999999999998876543 2235788999999999999999999999997632 2223366
Q ss_pred hHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 130 AYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 130 ~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+++.+|.++..+|++++|...|++++..
T Consensus 78 ~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 78 GLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999843
No 165
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.03 E-value=6.8e-10 Score=94.12 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+.+.|.++. .|++++|+.+|++|+.+.+... .+...+++.++...+.
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~--------------~~~~~~~~~~~~~~l~------------- 229 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDF--------------MFQLYGKYQDMALAVK------------- 229 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHH--------------HHTCCHHHHHHHHHHH-------------
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccch--------------hhhhcccHHHHHHHHH-------------
Confidence 45677888999998 7999999999999998765321 1234555555543321
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..+++++|.+++.+|++.+|+.+|++++.+.. ....++..++.++ ..|+++.|...++++
T Consensus 230 --~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p----~~~~a~~~lg~a~~~~g~~~~A~~~l~~a 290 (338)
T 2if4_A 230 --NPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE----KNPKALFRRGKAKAELGQMDSARDDFRKA 290 (338)
T ss_dssp --THHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT----TCHHHHHHHHHHHHTTTCHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 23789999999999999999999999985431 2357888999999 899999999999999
No 166
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.03 E-value=1.3e-10 Score=81.03 Aligned_cols=100 Identities=10% Similarity=0.035 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcch
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNS 126 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 126 (233)
.+.++.++|.++. .|++++|+.+|++++++.+.. ..++.++|.++..+|++++|+.+|++++.+....+....
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 76 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAI 76 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHH
Confidence 4677889999999 799999999999999986542 357889999999999999999999999976444333334
Q ss_pred HHHhHHHHHHHHHhhCCHHHHHHHHHH
Q 026767 127 QCKAYLSAIIVYLYANDFKQAEKCYND 153 (233)
Q Consensus 127 ~a~~~~~lg~~~~~~gd~~~A~~~~~~ 153 (233)
...++..+|.++...|++..|...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 77 RSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 467788999999988877766655544
No 167
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.01 E-value=1.5e-09 Score=74.99 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=77.5
Q ss_pred HHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHH
Q 026767 50 DALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQC 128 (233)
Q Consensus 50 ~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a 128 (233)
.++..+|.++. .|++++|+.+|++++++.+.. ..++.++|.++...|++++|+.+|++++.+.. .....
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~----~~~~~ 76 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE------SKYWLMKGKALYNLERYEEAVDCYNYVINVIE----DEYNK 76 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC----CTTCH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc----ccchH
Confidence 45667888888 799999999999998875432 24778899999999999999999999986521 11145
Q ss_pred HhHHHHHHHHHhh-CCHHHHHHHHHHhhcC
Q 026767 129 KAYLSAIIVYLYA-NDFKQAEKCYNDCSQV 157 (233)
Q Consensus 129 ~~~~~lg~~~~~~-gd~~~A~~~~~~al~~ 157 (233)
.++..+|.++... |++.+|++++++++..
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 77 DVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 6788999999999 9999999999998743
No 168
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=8.7e-09 Score=74.99 Aligned_cols=102 Identities=21% Similarity=0.100 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+..+|..+. .|++++|+.+|++++++.+. ......++.++|.++...|++++|+.+|++++.+. +
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~ 96 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT---PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD------G 96 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT------S
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc---chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC------c
Confidence 45778899999999 89999999999999986542 22235689999999999999999999999999762 2
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
....+++.+|.++...|++++|..+|++++..
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 97 GDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 23567899999999999999999999999854
No 169
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.00 E-value=7.2e-09 Score=76.41 Aligned_cols=109 Identities=15% Similarity=0.141 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-
Q 026767 23 HNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK- 100 (233)
Q Consensus 23 g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~- 100 (233)
+++++|+.+|++|.+ .|++... +|.+|. .+.+++|+++|++|++. |+ ..++.++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~----~g~~~a~------lg~~y~~g~~~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G 70 (138)
T 1klx_A 9 KDLKKAIQYYVKACE----LNEMFGC------LSLVSNSQINKQKLFQYLSKACEL----NS----GNGCRFLGDFYENG 70 (138)
T ss_dssp HHHHHHHHHHHHHHH----TTCTTHH------HHHHTCTTSCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHc----CCCHhhh------HHHHHHcCCCHHHHHHHHHHHHcC----CC----HHHHHHHHHHHHcC
Confidence 468899999999975 4666543 999999 57889999999999975 33 3688999999998
Q ss_pred ---hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh----hCCHHHHHHHHHHhhcC
Q 026767 101 ---LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY----ANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 101 ---~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~----~gd~~~A~~~~~~al~~ 157 (233)
.+++.+|+.+|+++.+. +...+..++|.+|.. .+|+.+|...|+++...
T Consensus 71 ~g~~~d~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 71 KYVKKDLRKAAQYYSKACGL--------NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 89999999999999853 335678999999999 89999999999998743
No 170
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.99 E-value=2.1e-10 Score=101.81 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcc
Q 026767 47 PASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 47 ~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..+..+.++|.++. .|++++|+++|++|+++.+.. ..++.++|.++.++|+|++|+.+|++++.+ .+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------~p 71 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN------AIYYGNRSLAYLRTECYGYALGDATRAIEL------DK 71 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------CT
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CC
Confidence 45566777888888 799999999999999985542 468999999999999999999999999975 23
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHH--H-hcCCHHHHHHHHh
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISA--Y-TEGDVEEIKRVAQ 189 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a--~-~~gd~~~a~~~~~ 189 (233)
..+.++.++|.++..+|++++|++.|++++.+.... . .+...++.+ + ..|++++|.+..+
T Consensus 72 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~--~--~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 72 KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD--K--DAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--T--THHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--H--HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 446789999999999999999999999998543211 1 233334443 4 6788888888877
No 171
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.99 E-value=2e-09 Score=88.99 Aligned_cols=131 Identities=11% Similarity=-0.058 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+.++..+|.++...|++++|+.++++++... +. ........+..+. .++.++|+..|+++++..+..
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~-----p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~------ 218 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQD-----QD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPED------ 218 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG-----CS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTC------
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhh-----cc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCcc------
Confidence 4678889999999999999999999997653 22 2344556666666 688899999999999987743
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..++.++|.++...|++++|+..|++++... .......++.+++.++...|+.++|...|++++
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~----p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al 282 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXD----LTAADGQTRXTFQEILAALGTGDALASXYRRQL 282 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcc----cccccchHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 2578999999999999999999999999752 223346778999999999999999999999986
No 172
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.98 E-value=2.5e-08 Score=88.90 Aligned_cols=166 Identities=9% Similarity=0.021 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
...+...|.++...|++++|...|++++.+ ++.....++.+.|.++. .|++++|+..|++|++..+..
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~------ 389 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR------ 389 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCc-----cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc------
Confidence 567788888888999999999999999875 23233468888998888 799999999999998753321
Q ss_pred HHHHHHHHHH-HHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHH
Q 026767 88 FDLYRAATNV-YIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQN 166 (233)
Q Consensus 88 ~~~l~~lg~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~ 166 (233)
...+...+.+ +...|++++|..+|++++.... ....++..++.++...|++++|+..|++++.........-.
T Consensus 390 ~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p------~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~ 463 (530)
T 2ooe_A 390 HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG------DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSG 463 (530)
T ss_dssp THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCH
T ss_pred hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC------CCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHH
Confidence 1223333333 3468999999999999998642 23456788999999999999999999999854322222223
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 167 RCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 167 ~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.+....++.. ..||.+.+....+++
T Consensus 464 ~lw~~~~~~e~~~G~~~~~~~~~~r~ 489 (530)
T 2ooe_A 464 EIWARFLAFESNIGDLASILKVEKRR 489 (530)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4555555544 579999999888887
No 173
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.98 E-value=1.1e-09 Score=77.90 Aligned_cols=89 Identities=12% Similarity=0.072 Sum_probs=71.4
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI 99 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~ 99 (233)
.+|++++|+.+|++|+.+. .+......++.++|.++. .|++++|+.+|++++++.+.. ..++.++|.++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~---~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~ 72 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG---LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH------QALRVFYAMVLY 72 (117)
T ss_dssp -----CCCHHHHHHHHSSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcC---CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------hHHHHHHHHHHH
Confidence 3688999999999998852 112356788999999999 799999999999999987654 357889999999
Q ss_pred HhccHHHHHHHHHHHHHHH
Q 026767 100 KLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~ 118 (233)
.+|++++|+.+|++++...
T Consensus 73 ~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 73 NLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999764
No 174
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.94 E-value=3e-09 Score=75.60 Aligned_cols=88 Identities=11% Similarity=0.034 Sum_probs=70.5
Q ss_pred hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh
Q 026767 61 DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY 140 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~ 140 (233)
.|++++|+.+|++++++.. +++ .-..++.++|.++..+|+|++|+.+|++++.+. +....+++++|.++..
T Consensus 3 ~g~~~~A~~~~~~al~~~~--~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGL--QGK-DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF------PNHQALRVFYAMVLYN 73 (117)
T ss_dssp ----CCCHHHHHHHHSSCC--CHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCC--CCc-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCchHHHHHHHHHHHH
Confidence 4789999999999998621 012 234689999999999999999999999999763 2235688999999999
Q ss_pred hCCHHHHHHHHHHhhcC
Q 026767 141 ANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 141 ~gd~~~A~~~~~~al~~ 157 (233)
+|++++|+..|++++..
T Consensus 74 ~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 99999999999999844
No 175
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.93 E-value=2.6e-08 Score=88.80 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-HHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHH
Q 026767 9 AKHMESAAALAKE-------LHNWR-------EVADFYRKASE-LYNECGRSQPASDALAKAARALE-DAVPEDAIQLYT 72 (233)
Q Consensus 9 a~~~~~~g~~~~~-------~g~~~-------eA~~~~~~A~~-l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~ 72 (233)
...+.+.|.++.. .|+++ +|+..|++|+. + .+ ....++...|.++. .|++++|+..|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~-----~p-~~~~l~~~~~~~~~~~g~~~~A~~~~~ 345 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-----LK-KNMLLYFAYADYEESRMKYEKVHSIYN 345 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT-----CS-SCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh-----Cc-ccHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4567777777765 79987 78888888875 3 22 34678899999999 799999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH-HHhhCCHHHHHHHH
Q 026767 73 DACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV-YLYANDFKQAEKCY 151 (233)
Q Consensus 73 ~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~-~~~~gd~~~A~~~~ 151 (233)
+++++.+. + ...++.+++.++.+.|++++|+.+|++++... +.....+...+.+ +...|++++|+..|
T Consensus 346 ~al~~~p~--~---~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~------~~~~~~~~~~a~~~~~~~~~~~~A~~~~ 414 (530)
T 2ooe_A 346 RLLAIEDI--D---PTLVYIQYMKFARRAEGIKSGRMIFKKAREDA------RTRHHVYVTAALMEYYCSKDKSVAFKIF 414 (530)
T ss_dssp HHHHSSSS--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT------TCCTHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHhCcccc--C---chHHHHHHHHHHHHhcCHHHHHHHHHHHHhcc------CCchHHHHHHHHHHHHHcCChhHHHHHH
Confidence 99986332 1 12478899999999999999999999998631 1223344444444 44689999999999
Q ss_pred HHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 152 NDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 152 ~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++++.... ....+...+++.+ ..|+.+.|+..++++
T Consensus 415 e~al~~~p----~~~~~~~~~~~~~~~~g~~~~Ar~~~~~a 451 (530)
T 2ooe_A 415 ELGLKKYG----DIPEYVLAYIDYLSHLNEDNNTRVLFERV 451 (530)
T ss_dssp HHHHHHHT----TCHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHHHHHCC----CCHHHHHHHHHHHHhCCCHhhHHHHHHHH
Confidence 99985431 2246778888887 789999999999999
No 176
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.91 E-value=1.3e-09 Score=75.36 Aligned_cols=99 Identities=20% Similarity=0.199 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..+..+|.++...|++++|+.+|++++.+.. ....++.++|.++. .|++++|+.+|++++++.+.. ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~----~~ 75 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDP------EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDE----YN 75 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCT----TC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc----ch
Confidence 35677899999999999999999999998742 23567899999999 899999999999999886541 11
Q ss_pred HHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Q 026767 88 FDLYRAATNVYIKL-EKYADAATFLLRWGLA 117 (233)
Q Consensus 88 ~~~l~~lg~~~~~~-g~~~~A~~~~~~al~~ 117 (233)
..++.++|.++..+ |++++|++++++++..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 35889999999999 9999999999998753
No 177
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.91 E-value=1.3e-08 Score=84.15 Aligned_cols=132 Identities=12% Similarity=-0.086 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAF 88 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~ 88 (233)
......+.++...|++++|.+.|+..+. +.+... +....|.++. .+++++|+.+++++..+- ++....
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~-----~~p~~~--~~~~~a~l~~~~~r~~dA~~~l~~a~~~~----d~~~~~ 171 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPV-----AGSEHL--VAWMKAVVYGAAERWTDVIDQVKSAGKWP----DKFLAG 171 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCC-----TTCHHH--HHHHHHHHHHHTTCHHHHHHHHTTGGGCS----CHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh-----cCCchH--HHHHHHHHHHHcCCHHHHHHHHHHhhccC----CcccHH
Confidence 3445567888889999999999988765 445444 7788888888 799999999998664321 333345
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC-cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA-TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
.+...+|.++..+|++++|+.+|++++. ... +.....+.+.+|.|+..+|+.++|...|++++.
T Consensus 172 ~a~~~LG~al~~LG~~~eAl~~l~~a~~----g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 172 AAGVAHGVAAANLALFTEAERRLTEAND----SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT----STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhc----CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 6889999999999999999999999872 111 222556789999999999999999999999873
No 178
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.89 E-value=5.2e-08 Score=85.59 Aligned_cols=169 Identities=12% Similarity=0.045 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC---CHHHHHHHHHHHHHHHHhcCCh
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DA---VPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g---~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
+.++.++|.+|...+.+++++....+..... ..+++. ++.++|.+|. .| ++++|+.+|++|++.-..
T Consensus 141 ~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a-~~~~~~----a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~---- 211 (452)
T 3e4b_A 141 PEAGLAQVLLYRTQGTYDQHLDDVERICKAA-LNTTDI----CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV---- 211 (452)
T ss_dssp TTHHHHHHHHHHHHTCGGGGHHHHHHHHHHH-TTTCTT----HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS----
T ss_pred HHHHHHHHHHHHcCCCcccCHHHHHHHHHHH-HcCCHH----HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH----
Confidence 3466677777777776665555422221111 234444 7899999999 78 999999999999864322
Q ss_pred HHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH-H--HhhCCHHHHHHHHHHhhcC
Q 026767 85 QMAFDLYRAATNVYIKL----EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV-Y--LYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~-~--~~~gd~~~A~~~~~~al~~ 157 (233)
.+..+.++|.+|... +++++|+.+|+++. ++...+++++|.+ + ...+|+.+|...|+++...
T Consensus 212 --~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---------~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 212 --TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---------PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp --CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---------GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---------CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 134568999999765 79999999999986 2335678999998 4 5789999999999999733
Q ss_pred CCCCCchHHHHHHHHHHHHhcC-----CHHHHHHHHhhcccccchHHHHHHh
Q 026767 158 DAFLRSDQNRCATKLISAYTEG-----DVEEIKRVAQSSAISNLDHVIIKLA 204 (233)
Q Consensus 158 ~~~~~~~e~~~l~~L~~a~~~g-----d~~~a~~~~~~~~~~~ld~~~~~l~ 204 (233)
. ...+...||..|..| |.++|...++++. ..-......|+
T Consensus 281 g------~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa-~g~~~A~~~Lg 325 (452)
T 3e4b_A 281 D------QPRAELLLGKLYYEGKWVPADAKAAEAHFEKAV-GREVAADYYLG 325 (452)
T ss_dssp T------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHTTT-TTCHHHHHHHH
T ss_pred C------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHh-CCCHHHHHHHH
Confidence 2 356778899988777 9999999999988 33333344444
No 179
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.89 E-value=8.1e-09 Score=85.04 Aligned_cols=96 Identities=15% Similarity=0.013 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchH
Q 026767 49 SDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQ 127 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 127 (233)
+..+..+|.++. .|++++|+.+|++|+.+.+.. ..++.++|.++..+|++++|+..|++++.+ .+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV------AVYYTNRALCYLKMQQPEQALADCRRALEL------DGQS 71 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------CTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCC
Confidence 567889999999 899999999999999986532 358899999999999999999999999864 3344
Q ss_pred HHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 128 CKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 128 a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
..+++++|.++..+|++++|+..|++++.
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999984
No 180
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.88 E-value=5.4e-08 Score=94.77 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc------
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED------ 81 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~------ 81 (233)
..+|.++|.++...|++++|+++|.+| ++ ...+.++|.++. .|++++|+++|..|.+.-+..
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-------dD----~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~L 1173 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-------DD----PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETEL 1173 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-------CC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHH
Confidence 356778888888888888888888776 33 445777888888 799999999998877544221
Q ss_pred -------CChHHHH--------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHH
Q 026767 82 -------DKEQMAF--------DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQ 146 (233)
Q Consensus 82 -------g~~~~~~--------~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~ 146 (233)
++..... ..+.++|..+...|+|++|..+|.++ ..|..++.++..+|++++
T Consensus 1174 afaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------------~ny~rLA~tLvkLge~q~ 1239 (1630)
T 1xi4_A 1174 IFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQA 1239 (1630)
T ss_pred HHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------------hHHHHHHHHHHHhCCHHH
Confidence 2111000 13557899999999999999999885 367889999999999999
Q ss_pred HHHHHHHhhcCCC-------------CCC---ch-----HHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 147 AEKCYNDCSQVDA-------------FLR---SD-----QNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 147 A~~~~~~al~~~~-------------~~~---~~-----e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|.++++++..... |.- .+ ....+..++..| ..|.++++...++.+
T Consensus 1240 AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1240 AVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999863321 100 01 122556777777 689999999888777
No 181
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.88 E-value=2.3e-08 Score=75.76 Aligned_cols=98 Identities=11% Similarity=0.039 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH-hh-hCCH--HHHHHHHHHHHHHHHhcCCh
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARA-LE-DAVP--EDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~-~~-~g~~--~~A~~~~~~Al~~~~~~g~~ 84 (233)
+.++..+|.+|...|++++|+.+|++++.+... ...++.++|.+ +. .|++ ++|+.+|++++++.+..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~--- 114 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE------NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE--- 114 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS------CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc---
Confidence 468899999999999999999999999998632 25678899999 76 7998 99999999999986532
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
..++..+|.++...|++++|+.+|++++.+.
T Consensus 115 ---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 115 ---ITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 2578899999999999999999999999764
No 182
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.85 E-value=4.1e-08 Score=65.58 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc
Q 026767 46 QPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT 124 (233)
Q Consensus 46 ~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 124 (233)
...+.++.++|.++. .|++++|+.+|++++++.+.. ..++.++|.++...|++++|+.+|++++.+.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~------ 73 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD------ 73 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC------
Confidence 345566777777777 677777777777777664321 2466777777777777777777777777642
Q ss_pred chHHHhHHHHHHHHHhhC
Q 026767 125 NSQCKAYLSAIIVYLYAN 142 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~g 142 (233)
+....++.++|.++...|
T Consensus 74 p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 74 PNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp TTCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 222445667777766544
No 183
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.77 E-value=2.3e-08 Score=82.58 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=78.5
Q ss_pred ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCC
Q 026767 83 KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLR 162 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~ 162 (233)
....-. +...+|.++.+.++|++|+.+|++++. ..++.....+++.+|.++..+|++.+|+.+|+++..-+. ..
T Consensus 131 ~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~----~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~-~P 204 (282)
T 4f3v_A 131 AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGK----WPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPA-GE 204 (282)
T ss_dssp TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGG----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTT-TT
T ss_pred cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhc----cCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCC-Cc
Confidence 333344 677777888888888888888875532 122223355789999999999999999999999873321 02
Q ss_pred chHHHHHHHHHHHH-hcCCHHHHHHHHhhc-ccccchHHHHH
Q 026767 163 SDQNRCATKLISAY-TEGDVEEIKRVAQSS-AISNLDHVIIK 202 (233)
Q Consensus 163 ~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ld~~~~~ 202 (233)
.....+...++.++ +.|+.++|+..+++. ....- .+...
T Consensus 205 ~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 205 ACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp TTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHH
Confidence 22445667777777 799999999999999 44443 44333
No 184
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.74 E-value=5.6e-07 Score=87.79 Aligned_cols=155 Identities=17% Similarity=0.155 Sum_probs=105.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH-------HHHHcCCchHH---------HHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 14 SAAALAKELHNWREVADFYRKASE-------LYNECGRSQPA---------SDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 14 ~~g~~~~~~g~~~eA~~~~~~A~~-------l~~~~g~~~~~---------a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
.+|.++...|.++||...|+++.. ++...|+...+ ..+|.++|..+. .|++++|+..|.+|
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 367777777777777777766532 22234444433 346788999999 79999999999887
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH-------------ccCc--------chHHHhHHHHH
Q 026767 77 MLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK-------------CNAT--------NSQCKAYLSAI 135 (233)
Q Consensus 77 ~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~-------------~~~~--------~~~a~~~~~lg 135 (233)
++. ..+.++|.++.+.|+|++|+++|+.++..-+. .+.. ......+.++|
T Consensus 1132 -----dD~----say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iG 1202 (1630)
T 1xi4_A 1132 -----DDP----SSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVG 1202 (1630)
T ss_pred -----CCh----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHH
Confidence 332 46778999999999999999999887743311 0000 00112456788
Q ss_pred HHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 136 IVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 136 ~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
..+...|+|.+|..+|..+ .....++..+ ..|+++.|.++.+.+
T Consensus 1203 d~le~eg~YeeA~~~Y~kA------------~ny~rLA~tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1203 DRCYDEKMYDAAKLLYNNV------------SNFGRLASTLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred HHHHhcCCHHHHHHHHHhh------------hHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 8888888888888888885 2344556655 567777777777766
No 185
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.72 E-value=1e-07 Score=63.60 Aligned_cols=87 Identities=18% Similarity=0.187 Sum_probs=71.3
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g 82 (233)
++...+.++..+|.++...|++++|+.+|++++.+.. ....++.++|.++. .|++++|+.+|++++++.+..
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~- 76 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN- 76 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-
Confidence 3445678999999999999999999999999998742 23568899999999 899999999999999986532
Q ss_pred ChHHHHHHHHHHHHHHHHhc
Q 026767 83 KEQMAFDLYRAATNVYIKLE 102 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~~g 102 (233)
..++.++|.++..+|
T Consensus 77 -----~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 77 -----AEAKQNLGNAKQKQG 91 (91)
T ss_dssp -----HHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHHHhcC
Confidence 257788888887654
No 186
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.68 E-value=4.7e-08 Score=73.77 Aligned_cols=84 Identities=15% Similarity=0.050 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHHHhHccCcchHHHhH
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKY----------ADAATFLLRWGLAADKCNATNSQCKAY 131 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~a~~~ 131 (233)
+.+++|++.|++|+++.+.. +.++.++|.++..++++ ++|+..|++++.+ .+....++
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~------aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l------dP~~~~A~ 83 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLD------ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI------DPKKDEAV 83 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh------CcCcHHHH
Confidence 67889999999999888753 36888999999988875 5999999999987 34456789
Q ss_pred HHHHHHHHhhC-----------CHHHHHHHHHHhhcC
Q 026767 132 LSAIIVYLYAN-----------DFKQAEKCYNDCSQV 157 (233)
Q Consensus 132 ~~lg~~~~~~g-----------d~~~A~~~~~~al~~ 157 (233)
+++|.+|..+| ++++|+++|++|+.+
T Consensus 84 ~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 84 WCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 99999999875 899999999999955
No 187
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.67 E-value=1.8e-07 Score=65.79 Aligned_cols=83 Identities=7% Similarity=-0.163 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHH
Q 026767 27 EVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYA 105 (233)
Q Consensus 27 eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~ 105 (233)
+|+.+|++++... + ....++.++|.++. .|++++|+.+|++++.+.+.. ..++.++|.++...|+++
T Consensus 3 ~a~~~~~~al~~~-----p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~ 70 (115)
T 2kat_A 3 AITERLEAMLAQG-----T-DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY------SVAWKWLGKTLQGQGDRA 70 (115)
T ss_dssp CHHHHHHHHHTTT-----C-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhC-----C-CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHcCCHH
Confidence 4566666665532 1 22456777777777 677888888887777765432 246677777777778888
Q ss_pred HHHHHHHHHHHHHhHc
Q 026767 106 DAATFLLRWGLAADKC 121 (233)
Q Consensus 106 ~A~~~~~~al~~~~~~ 121 (233)
+|+.+|++++.+....
T Consensus 71 ~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 71 GARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc
Confidence 8888777777765443
No 188
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.66 E-value=3.1e-07 Score=63.33 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc
Q 026767 49 SDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC 121 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 121 (233)
..++.++|.++. .|++++|+.+|++++++.+... .++.++|.++..+|++++|+..|++++.+....
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYV------GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 345566666666 5666666666666666554322 255666666666666666666666666655443
No 189
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.65 E-value=4.3e-08 Score=73.98 Aligned_cols=85 Identities=12% Similarity=0.108 Sum_probs=70.8
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC----------HHHHHHHHHHHHHHHHhcCChHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV----------PEDAIQLYTDACIMLEEDDKEQMAFD 89 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~----------~~~A~~~~~~Al~~~~~~g~~~~~~~ 89 (233)
+.+.+++|+..|++|+++. ..-+.+|.++|.++. .++ +++|+..|++|+++-+.. ..
T Consensus 14 r~~~feeA~~~~~~Ai~l~------P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~------~~ 81 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSN------PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK------DE 81 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC------HH
T ss_pred HHhHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc------HH
Confidence 4567889999999998884 245678999999988 665 469999999999997752 36
Q ss_pred HHHHHHHHHHHhc-----------cHHHHHHHHHHHHHH
Q 026767 90 LYRAATNVYIKLE-----------KYADAATFLLRWGLA 117 (233)
Q Consensus 90 ~l~~lg~~~~~~g-----------~~~~A~~~~~~al~~ 117 (233)
++.++|.+|..+| ++++|+.+|++|+++
T Consensus 82 A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 8999999999885 899999999999987
No 190
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.65 E-value=3.5e-07 Score=63.08 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
-+.++.++|.+|...|++++|+.+|++++.+... -..++.++|.+|. .|++++|+.+|++++++.+..++...
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 3568899999999999999999999999988422 3458999999999 89999999999999999998877643
No 191
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.60 E-value=9.9e-08 Score=83.37 Aligned_cols=163 Identities=11% Similarity=0.114 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-------------HHHHcCCchHH--------HHHHHHHHHHhh-hCCHHHHH
Q 026767 11 HMESAAALAKELHNWREVADFYRKASE-------------LYNECGRSQPA--------SDALAKAARALE-DAVPEDAI 68 (233)
Q Consensus 11 ~~~~~g~~~~~~g~~~eA~~~~~~A~~-------------l~~~~g~~~~~--------a~~l~~lg~~~~-~g~~~~A~ 68 (233)
.|..++..+...|++++|+.+++.+.+ .|.+.|+.... ..++.++|..+. .|.+++|+
T Consensus 63 ~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA~ 142 (449)
T 1b89_A 63 SYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAK 142 (449)
T ss_dssp ----------------------------------------------CHHHHTTTTTCC----------------CTTTHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 455566666667777777777777663 23344433221 127788888888 79999999
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---------HhHcc---------Cc-chHHH
Q 026767 69 QLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA---------ADKCN---------AT-NSQCK 129 (233)
Q Consensus 69 ~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~---------~~~~~---------~~-~~~a~ 129 (233)
.+|.++ ..+.+++.++.++|+|++|++.|+++... |...+ .. ...+.
T Consensus 143 ~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad 208 (449)
T 1b89_A 143 LLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHAD 208 (449)
T ss_dssp HHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHH
T ss_pred HHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHh
Confidence 988866 35778999999999999999999987322 11111 00 00111
Q ss_pred hHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 130 AYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 130 ~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
.+..++.+|.+.|.+.+|..+++.++.+.+. -..+.+.|+-++..=.++...++++.+
T Consensus 209 ~l~~lv~~Yek~G~~eEai~lLe~aL~le~a----h~~~ftel~il~~ky~p~k~~ehl~~~ 266 (449)
T 1b89_A 209 ELEELINYYQDRGYFEELITMLEAALGLERA----HMGMFTELAILYSKFKPQKMREHLELF 266 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSTTC----CHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCHHHHHHHHHHHhCCcHH----HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2334567788888888888888888755432 245667777777777788888888877
No 192
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.53 E-value=1.4e-06 Score=61.04 Aligned_cols=71 Identities=13% Similarity=0.030 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
+.++.++|.+|...|++++|+.+|++++.+.. ....++.++|.++. .|++++|+.+|++++++.+..++..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 90 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDP------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQ 90 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHH
Confidence 56899999999999999999999999998742 23568899999999 8999999999999999999877653
No 193
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.50 E-value=1.2e-06 Score=76.52 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHH---------HHh
Q 026767 11 HMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIM---------LEE 80 (233)
Q Consensus 11 ~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~---------~~~ 80 (233)
++.++|..|...|++++|..+|.++ ..+.++|.++. .|++++|++.|++|-.. ...
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHH
Confidence 7888899888899999999988866 36778888888 68889888888888322 011
Q ss_pred cCChHHHH----------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh--hCCHHHHH
Q 026767 81 DDKEQMAF----------DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY--ANDFKQAE 148 (233)
Q Consensus 81 ~g~~~~~~----------~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~--~gd~~~A~ 148 (233)
.|+...+- .-+..+..+|.+.|++++|+.++++++.+ .+.....+..++.+|.+ .|+..+.+
T Consensus 190 ~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l------e~ah~~~ftel~il~~ky~p~k~~ehl 263 (449)
T 1b89_A 190 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL------ERAHMGMFTELAILYSKFKPQKMREHL 263 (449)
T ss_dssp TTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------TTCCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC------cHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 11111110 11224557899999999999999999853 23334456666666654 45555555
Q ss_pred HHHHHhhcCC
Q 026767 149 KCYNDCSQVD 158 (233)
Q Consensus 149 ~~~~~al~~~ 158 (233)
+.|...+.++
T Consensus 264 ~~~~~~ini~ 273 (449)
T 1b89_A 264 ELFWSRVNIP 273 (449)
T ss_dssp HHHSTTSCHH
T ss_pred HHHHHHhcCc
Confidence 5555544444
No 194
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.50 E-value=1.1e-06 Score=64.39 Aligned_cols=87 Identities=15% Similarity=0.107 Sum_probs=75.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhh-----CCHHHHHHHHHHHHHHHHhcCChHHHHH
Q 026767 15 AAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALED-----AVPEDAIQLYTDACIMLEEDDKEQMAFD 89 (233)
Q Consensus 15 ~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~-----g~~~~A~~~~~~Al~~~~~~g~~~~~~~ 89 (233)
+|.+|...+..++|+.+|++|.+. | -+.++.++|.+|.. +++++|+++|++|++. |+ ..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~----g----~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----g~----~~ 94 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL----N----SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----ND----QD 94 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----TC----HH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC----C----CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----CC----HH
Confidence 889998888899999999999875 4 35778999999984 6899999999999864 43 35
Q ss_pred HHHHHHHHHHH----hccHHHHHHHHHHHHHH
Q 026767 90 LYRAATNVYIK----LEKYADAATFLLRWGLA 117 (233)
Q Consensus 90 ~l~~lg~~~~~----~g~~~~A~~~~~~al~~ 117 (233)
++.++|.+|.. .+++++|+.+|+++.+.
T Consensus 95 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 95 GCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 78999999999 89999999999999863
No 195
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.45 E-value=5.2e-05 Score=65.36 Aligned_cols=176 Identities=6% Similarity=-0.027 Sum_probs=138.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-CChHHHHHH
Q 026767 13 ESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-DKEQMAFDL 90 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g~~~~~~~~ 90 (233)
..+|..|...|+|.+|+..+.+...-.....|......++..-..+|. .+++.++...|.+|..+.... .++...+..
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 378999999999999999999999999888888788888888888888 799999999999999998876 677777878
Q ss_pred HHHHHHHHH-HhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHH
Q 026767 91 YRAATNVYI-KLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCA 169 (233)
Q Consensus 91 l~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l 169 (233)
...-|.++. ..++|.+|..+|-++.+-+...+.+.. ..++.-+++|.+..++..+-......= ....+ ...+-..+
T Consensus 183 ~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~-~~~lkYlvL~aLl~~~r~el~~~l~~~-~~~~~-~~pei~~l 259 (394)
T 3txn_A 183 DLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKA-LTSLKYMLLCKIMLGQSDDVNQLVSGK-LAITY-SGRDIDAM 259 (394)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHHHHTTCGGGHHHHHHSH-HHHTT-CSHHHHHH
T ss_pred HHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHHH-HHHHHHHHHHHHHcCCHHHHHHHhccc-ccccc-CCccHHHH
Confidence 888899999 899999999999999988876665432 234455677777777632222222110 01112 34567789
Q ss_pred HHHHHHHhcCCHHHHHHHHhhc
Q 026767 170 TKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 170 ~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
..|..++..+|...+...++.+
T Consensus 260 ~~L~~a~~~~dl~~f~~iL~~~ 281 (394)
T 3txn_A 260 KSVAEASHKRSLADFQAALKEY 281 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999988876
No 196
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.42 E-value=1.9e-05 Score=65.89 Aligned_cols=177 Identities=7% Similarity=-0.006 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q 026767 11 HMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFD 89 (233)
Q Consensus 11 ~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~ 89 (233)
++.-+|.++...|++++|+.++.+.+. .|.......++..++.++. .|+++.|.+.+++..+..+..- +..-.
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~----~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~--~~~d~ 175 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGID----NDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTV--SGDNE 175 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHT----SSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHH--HHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhc----cCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccc--ccchH
Confidence 346888999999999999999998733 2322356677778888888 7999999999998766544100 00012
Q ss_pred HHHHHHHH--HHHhc--cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC-CCC----
Q 026767 90 LYRAATNV--YIKLE--KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV-DAF---- 160 (233)
Q Consensus 90 ~l~~lg~~--~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~-~~~---- 160 (233)
++..++.. .+..| ++.+|+.+|++.... .++ +.....+++ ++..+|++++|.+.++..+.. +.+
T Consensus 176 ~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~---~p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~ 248 (310)
T 3mv2_B 176 MILNLAESYIKFATNKETATSNFYYYEELSQT---FPT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKE 248 (310)
T ss_dssp HHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT---SCS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh---CCC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccc
Confidence 44555444 55556 999999999986532 111 122333444 899999999999999976543 222
Q ss_pred -CCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc-ccccchHHHHH
Q 026767 161 -LRSDQNRCATKLISAY-TEGDVEEIKRVAQSS-AISNLDHVIIK 202 (233)
Q Consensus 161 -~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ld~~~~~ 202 (233)
..+....++.+++... ..|+ .+.+.+++. ...+=.+++..
T Consensus 249 ~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d 291 (310)
T 3mv2_B 249 NAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKH 291 (310)
T ss_dssp HHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHH
Confidence 1345677886776544 5676 666777666 34433334333
No 197
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.37 E-value=5.8e-06 Score=57.54 Aligned_cols=68 Identities=7% Similarity=-0.080 Sum_probs=51.2
Q ss_pred HHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 50 DALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK-EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 50 ~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~-~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.-...+|..+. .++|..|+.||++|+........ ......++..+|.++.++|++++|+.++++++.+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 34557788887 78888888888888888765431 1223467888888888888888888888888865
No 198
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.28 E-value=3.7e-06 Score=57.06 Aligned_cols=86 Identities=10% Similarity=-0.044 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHH-HHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 026767 13 ESAAALAKELHNWREVADFYRKASELYNECGRSQPASD-ALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDL 90 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~-~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~ 90 (233)
.+.|.++...|++++|+.+|++++... +. ... ++.++|.++. .|++++|+.+|++++++.+.... +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~------~ 71 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTE-----PV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPA------L 71 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC-----SS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC-----CC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH------H
Confidence 356778888899999999999998863 22 234 7888999988 79999999999999988665432 1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 91 YRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 91 l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
+. .+.+.+++.+|++++...
T Consensus 72 ~~--------~~~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 72 QA--------RKMVMDILNFYNKDMYNQ 91 (99)
T ss_dssp HH--------HHHHHHHHHHHCCTTHHH
T ss_pred HH--------HHHHHHHHHHHHHHhccC
Confidence 11 156777777777776553
No 199
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.28 E-value=0.00013 Score=62.80 Aligned_cols=188 Identities=13% Similarity=0.107 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh--hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE--DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~--~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
.+...+|.+|...|++++-.+++......+...... ..+....++=..+. .+..+.-++....++++.+........
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ka-k~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr 98 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKA-KAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLR 98 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHH-HHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999998887777665544 46676777776666 377788889999999999887766555
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC--CCCc-h
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA--FLRS-D 164 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~--~~~~-~ 164 (233)
..+-.++|.+|...|+|.+|...+.+...-+....+......++.....+|..++++.++...+..+..+.. ..++ -
T Consensus 99 ~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i 178 (394)
T 3txn_A 99 QSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKV 178 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHH
Confidence 445568999999999999999999998888877766666777788888889999999999999988874332 1322 2
Q ss_pred HHHHHHHHHHHH--hcCCHHHHHHHHhhc--ccccchH
Q 026767 165 QNRCATKLISAY--TEGDVEEIKRVAQSS--AISNLDH 198 (233)
Q Consensus 165 e~~~l~~L~~a~--~~gd~~~a~~~~~~~--~~~~ld~ 198 (233)
.+.+-..-|-.+ ..+|+..|...+-++ .+...+.
T Consensus 179 ~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~ 216 (394)
T 3txn_A 179 QGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDS 216 (394)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccccccc
Confidence 333333333333 478888887776666 4555544
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.19 E-value=1.7e-05 Score=55.09 Aligned_cols=73 Identities=12% Similarity=0.023 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGR-SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~-~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~ 81 (233)
+.....+|..+.+.++|..|+.+|++|+........ ......++.++|.++. .|+++.|+.++++++.+.+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 355678999999999999999999999999865432 2456789999999999 899999999999999986653
No 201
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.07 E-value=4.2e-05 Score=51.60 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=48.2
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHH-hHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCK-AYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~-~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
.+.|.++...|+|++|+..|++++... +.... +++.+|.++..+|++++|+.+|++++..
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTE------PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC------SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 457888888999999999999988752 22234 7889999999999999999999998844
No 202
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.06 E-value=0.00013 Score=54.94 Aligned_cols=107 Identities=7% Similarity=-0.005 Sum_probs=81.2
Q ss_pred HHHHHHHH-HHHHhhhCCHHHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc
Q 026767 47 PASDALAK-AARALEDAVPEDAIQLYTDACIMLEEDDK---EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN 122 (233)
Q Consensus 47 ~~a~~l~~-lg~~~~~g~~~~A~~~~~~Al~~~~~~g~---~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 122 (233)
+.-+++.. +-.++..+.|+.|+-....++.+.....+ +...+.++..+|+++...++|.+|..+|++++...+...
T Consensus 18 ~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~ 97 (167)
T 3ffl_A 18 GSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALS 97 (167)
T ss_dssp ---CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence 33344443 34444479999999999999988876553 677788999999999999999999999999988776432
Q ss_pred C-------------------cchHHHhHHHHHHHHHhhCCHHHHHHHHHH
Q 026767 123 A-------------------TNSQCKAYLSAIIVYLYANDFKQAEKCYND 153 (233)
Q Consensus 123 ~-------------------~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~ 153 (233)
. ...+..+.+.++.||...+++.+|+..++.
T Consensus 98 k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 98 KTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1 123345678999999999999999998876
No 203
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.95 E-value=0.0004 Score=52.29 Aligned_cols=100 Identities=18% Similarity=0.088 Sum_probs=81.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChH---
Q 026767 13 ESAAALAKELHNWREVADFYRKASELYNECGR---SQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQ--- 85 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~---~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~--- 85 (233)
.++-.++ +.+.|+-|+-....++.+.....+ +...+.++..+|..+. +++|..|...|++|+.+.+...+..
T Consensus 25 dqik~L~-d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~ 103 (167)
T 3ffl_A 25 DHVRDMA-AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVR 103 (167)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHH-HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3343344 489999999999999999876555 6788999999999999 8999999999999999988543222
Q ss_pred ----------------HHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 026767 86 ----------------MAFDLYRAATNVYIKLEKYADAATFLLR 113 (233)
Q Consensus 86 ----------------~~~~~l~~lg~~~~~~g~~~~A~~~~~~ 113 (233)
...++...++.+|.+++++++|+..++.
T Consensus 104 ~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 104 PSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 2246889999999999999999998773
No 204
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.91 E-value=0.00057 Score=56.92 Aligned_cols=170 Identities=4% Similarity=-0.079 Sum_probs=124.7
Q ss_pred HHHHHHHHH----HHc---CCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHH--HHHHHHHHHHHHHHh
Q 026767 11 HMESAAALA----KEL---HNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPE--DAIQLYTDACIMLEE 80 (233)
Q Consensus 11 ~~~~~g~~~----~~~---g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~--~A~~~~~~Al~~~~~ 80 (233)
+++.-+.++ ... +++++++.++++++.... .-..++..-+.++. .|.++ ++++++.++++....
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~p------kny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~ 178 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDP------KNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK 178 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC
Confidence 455555666 555 789999999999997642 33456777788888 68887 999999999976543
Q ss_pred cCChHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHH-HHHHHHH
Q 026767 81 DDKEQMAFDLYRAATNVYIKLEK------YADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQ-AEKCYND 153 (233)
Q Consensus 81 ~g~~~~~~~~l~~lg~~~~~~g~------~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~-A~~~~~~ 153 (233)
. ..+.+..+.++..+++ ++++++++.+++.+ .+....+++.++.++...|+... ...++++
T Consensus 179 N------~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~------~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~ 246 (306)
T 3dra_A 179 N------NSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK------CPQNPSTWNYLLGIHERFDRSITQLEEFSLQ 246 (306)
T ss_dssp C------HHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH------CSSCHHHHHHHHHHHHHTTCCGGGGHHHHHT
T ss_pred C------HHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh------CCCCccHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 2 2477888888888887 99999999999975 23344577888888888888555 4445566
Q ss_pred hhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc--ccccchHH
Q 026767 154 CSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS--AISNLDHV 199 (233)
Q Consensus 154 al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~--~~~~ld~~ 199 (233)
++..... ...-..++..|++++ +.|+.++|.++++.. .++.+...
T Consensus 247 ~~~~~~~-~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~ 294 (306)
T 3dra_A 247 FVDLEKD-QVTSSFALETLAKIYTQQKKYNESRTVYDLLKSKYNPIRSN 294 (306)
T ss_dssp TEEGGGT-EESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHhccCC-CCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhccChHHHH
Confidence 6543211 223356788999998 789999999999998 36777654
No 205
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.79 E-value=0.00035 Score=47.51 Aligned_cols=65 Identities=12% Similarity=-0.049 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc-CCC
Q 026767 89 DLYRAATNVYIKLEK---YADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ-VDA 159 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~-~~~ 159 (233)
..+..+|.+++..++ .++|..++++++.+ .+...++++.+|.+++..|+|.+|+.+|++.+. .+.
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQL------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577888888876665 79999999999976 455567889999999999999999999999984 444
No 206
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=97.79 E-value=0.011 Score=49.08 Aligned_cols=204 Identities=7% Similarity=0.014 Sum_probs=141.9
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhh-C-------------------
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALED-A------------------- 62 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~-g------------------- 62 (233)
|+++++=+.|..+.+=|..++++++|++.....+..+.+.|....++..-.-+-.+|.. +
T Consensus 27 G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p 106 (312)
T 2wpv_A 27 GDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELD 106 (312)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCC
T ss_pred cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCC
Confidence 57788888888888888889999999999888888888888877666654444444441 1
Q ss_pred -CHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhccHHHHHHHHHH----HH--------HHHhHc-cCcchH
Q 026767 63 -VPEDAIQLYTDACIMLEEDDK-EQMAFDLYRAATNVYIKLEKYADAATFLLR----WG--------LAADKC-NATNSQ 127 (233)
Q Consensus 63 -~~~~A~~~~~~Al~~~~~~g~-~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~----al--------~~~~~~-~~~~~~ 127 (233)
.-..=..+..+|+.+....|. +.+-...+.-+|..+.+-|++.+|..+|-. .. +.+... +..+.+
T Consensus 107 ~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e 186 (312)
T 2wpv_A 107 PSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDST 186 (312)
T ss_dssp TTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred CCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcch
Confidence 111224667778888776653 444456788999999999999999998842 11 122221 023344
Q ss_pred HHhH-HHHHHHHHhhCCHHHHHHHHHHhh-cC---------------CC---CCCchHHHHHHHHHHHHhcCCHHHHHHH
Q 026767 128 CKAY-LSAIIVYLYANDFKQAEKCYNDCS-QV---------------DA---FLRSDQNRCATKLISAYTEGDVEEIKRV 187 (233)
Q Consensus 128 a~~~-~~lg~~~~~~gd~~~A~~~~~~al-~~---------------~~---~~~~~e~~~l~~L~~a~~~gd~~~a~~~ 187 (233)
...+ ....+.|+..|+...|...|.... .. .. |....--.++.-|..+++.++.+.++..
T Consensus 187 ~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~pllnF~~lLl~t~e~~~~~lF~~L 266 (312)
T 2wpv_A 187 VAEFFSRLVFNYLFISNISFAHESKDIFLERFIEKFHPKYEKIDKNGYEIVFFEDYSDLNFLQLLLITCQTKDKSYFLNL 266 (312)
T ss_dssp HHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHCCCEEEEEETTEEEEEESSCHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCccHHHHHHHHHHHhcCCHHHHHHH
Confidence 4444 566677899999999999988765 11 11 1224557788888889988999999999
Q ss_pred Hhhc--ccccchHHHHHHhcc
Q 026767 188 AQSS--AISNLDHVIIKLARK 206 (233)
Q Consensus 188 ~~~~--~~~~ld~~~~~l~~~ 206 (233)
+++| .++.......+|+..
T Consensus 267 ~~~Y~~~L~~~~~~L~~Ig~~ 287 (312)
T 2wpv_A 267 KNHYLDFSQAYKSELEFLGQE 287 (312)
T ss_dssp HHHCHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999 665555556666553
No 207
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.76 E-value=0.003 Score=56.12 Aligned_cols=162 Identities=7% Similarity=0.060 Sum_probs=112.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC---------CHHHHHHHHHHHHHHHHhc
Q 026767 12 MESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DA---------VPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 12 ~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g---------~~~~A~~~~~~Al~~~~~~ 81 (233)
+...-..|.+.|+.++|+..|++.... |-.. -..+|+.+-.++. .+ ..++|.+.|.+-. ..
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~----Gv~p-d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~----~~ 99 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRN----GVQL-SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMI----VD 99 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHH----TCCC-CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHH----HT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHc----CCCC-CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHH----Hh
Confidence 455556777899999999999987642 3222 2234444444443 22 3556666655432 23
Q ss_pred CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCC
Q 026767 82 DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFL 161 (233)
Q Consensus 82 g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~ 161 (233)
|-.... .+++.+-..|.+.|++++|..+|++... .|..+. ..+|..+...|...|+.++|.+.|++.... +.
T Consensus 100 G~~Pd~-~tyn~lI~~~~~~g~~~~A~~l~~~M~~----~g~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-G~- 171 (501)
T 4g26_A 100 KVVPNE-ATFTNGARLAVAKDDPEMAFDMVKQMKA----FGIQPR-LRSYGPALFGFCRKGDADKAYEVDAHMVES-EV- 171 (501)
T ss_dssp TCCCCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH----TTCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-TC-
T ss_pred CCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHH----cCCCCc-cceehHHHHHHHHCCCHHHHHHHHHHHHhc-CC-
Confidence 422232 4889999999999999999999998753 343333 457899999999999999999999987532 11
Q ss_pred CchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 162 RSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 162 ~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
.........|+.++ ..|+.++|.+.+++-
T Consensus 172 -~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 172 -VPEEPELAALLKVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHhhCCCHHHHHHHHHHH
Confidence 12345677888888 899999999988875
No 208
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.75 E-value=0.00074 Score=56.27 Aligned_cols=133 Identities=12% Similarity=0.022 Sum_probs=90.5
Q ss_pred HHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHH
Q 026767 50 DALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQC 128 (233)
Q Consensus 50 ~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a 128 (233)
.++.-+|.++. .|++++|++++.+.+..-+. .....++..++.++.++|+.+.|.+.+++........-......
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~----~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~ 176 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDNDEA----EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEM 176 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCS----TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC----cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHH
Confidence 33468899999 89999999999998543321 12336788899999999999999999998765421000001222
Q ss_pred HhHHHHHHHHHhhC--CHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 129 KAYLSAIIVYLYAN--DFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 129 ~~~~~lg~~~~~~g--d~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
...+.-+.+.+..| ++.+|...|++....+ ..+.....+.. ++ ..|++++|++.++..
T Consensus 177 l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~--p~~~~~~lLln---~~~~~g~~~eAe~~L~~l 237 (310)
T 3mv2_B 177 ILNLAESYIKFATNKETATSNFYYYEELSQTF--PTWKTQLGLLN---LHLQQRNIAEAQGIVELL 237 (310)
T ss_dssp HHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTS--CSHHHHHHHHH---HHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhC--CCcccHHHHHH---HHHHcCCHHHHHHHHHHH
Confidence 33344466677777 9999999999976433 11112222222 55 799999999999854
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.68 E-value=0.0024 Score=54.35 Aligned_cols=120 Identities=10% Similarity=-0.043 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh----hC-CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 026767 25 WREVADFYRKASELYNECGRSQPASDALAKAARALE----DA-VPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI 99 (233)
Q Consensus 25 ~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~----~g-~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~ 99 (233)
+.+|+.+|++|+++- | .-+.++..++.+|. .+ .....+.-..+++............+.++..++.++.
T Consensus 215 ~~~A~~l~e~Al~lD-----P-~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l 288 (372)
T 3ly7_A 215 LNRASELLGEIVQSS-----P-EFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSAL 288 (372)
T ss_dssp HHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHH
Confidence 467777777777763 2 12222333333332 12 1122233334444432222211223356777777777
Q ss_pred HhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 100 KLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
..|++++|+..+++|+.+- + . +.++..+|.++...|++++|.+.|++|+.+
T Consensus 289 ~~gd~d~A~~~l~rAl~Ln-----~-s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 289 VKGKTDESYQAINTGIDLE-----M-S-WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHTCHHHHHHHHHHHHHHC-----C-C-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHhcC-----C-C-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 7788888888888888761 1 1 345677788888888888888888888744
No 210
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.66 E-value=0.00031 Score=63.42 Aligned_cols=129 Identities=9% Similarity=-0.023 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC--CHHHHHHHHHHHHH
Q 026767 10 KHMESAAALAKELHN----------WREVADFYRKASELYNECGRSQPASDALAKAARALE-DA--VPEDAIQLYTDACI 76 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~----------~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g--~~~~A~~~~~~Al~ 76 (233)
.+|+.-+.++...++ +++++.++++++... ..-..+|..-+.++. .+ +++++++++.++++
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~------pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~ 137 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN------PKSYGTWHHRCWLLSRLPEPNWARELELCARFLE 137 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHh
Confidence 567777777877777 899999999998753 234556777788888 68 67999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh--------------
Q 026767 77 MLEEDDKEQMAFDLYRAATNVYIKLE-KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA-------------- 141 (233)
Q Consensus 77 ~~~~~g~~~~~~~~l~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~-------------- 141 (233)
+.... ..+++.-+.++..+| .++++++++.++++. .+....++...+.++...
T Consensus 138 ~d~~N------~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~------~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~ 205 (567)
T 1dce_A 138 ADERN------FHCWDYRRFVAAQAAVAPAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPE 205 (567)
T ss_dssp HCTTC------HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT------TCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCH
T ss_pred hcccc------ccHHHHHHHHHHHcCCChHHHHHHHHHHHHH------CCCCccHHHHHHHHHHhhcccccccccccccH
Confidence 86542 357888899999999 999999999998853 333445677777777664
Q ss_pred CCHHHHHHHHHHhhc
Q 026767 142 NDFKQAEKCYNDCSQ 156 (233)
Q Consensus 142 gd~~~A~~~~~~al~ 156 (233)
+.++++++++.+++.
T Consensus 206 ~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 206 NVLLKELELVQNAFF 220 (567)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 568999999999984
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.65 E-value=0.0012 Score=49.06 Aligned_cols=99 Identities=8% Similarity=0.011 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHh
Q 026767 64 PEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLE---KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLY 140 (233)
Q Consensus 64 ~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~ 140 (233)
...+.+.|.+.+. .+.. ...+.+++|+++++.+ +..+++.+++..+..- .+.....+++++|..|.+
T Consensus 14 l~~~~~~y~~e~~----~~~~--~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~k 83 (152)
T 1pc2_A 14 LLKFEKKFQSEKA----AGSV--SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYR 83 (152)
T ss_dssp HHHHHHHHHHHHH----TTCC--CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----cCCC--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHH
Confidence 3445555555543 2322 2368999999999988 7789999999888631 122445688999999999
Q ss_pred hCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHH
Q 026767 141 ANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLIS 174 (233)
Q Consensus 141 ~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~ 174 (233)
+|+|.+|++++++++.+.. ...++..|..+.+
T Consensus 84 l~~Y~~A~~y~~~lL~ieP--~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 84 LKEYEKALKYVRGLLQTEP--QNNQAKELERLID 115 (152)
T ss_dssp TSCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHH
Confidence 9999999999999995431 3456666666664
No 212
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.60 E-value=0.0016 Score=53.70 Aligned_cols=88 Identities=10% Similarity=0.071 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH
Q 026767 63 VPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKL-----EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV 137 (233)
Q Consensus 63 ~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~-----g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~ 137 (233)
....|...+++|+++-+.. .-+.++..+|.+|... |+.++|..+|++|+.+. +.+...++...|..
T Consensus 178 ~l~~A~a~lerAleLDP~~----~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~Ln-----P~~~id~~v~YA~~ 248 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSY----QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYC-----SAHDPDHHITYADA 248 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTH----HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHC-----CTTCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCc----ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhC-----CCCCchHHHHHHHH
Confidence 3578888899999887752 2345889999999984 99999999999999873 22224566777888
Q ss_pred HHh-hCCHHHHHHHHHHhhcCCC
Q 026767 138 YLY-ANDFKQAEKCYNDCSQVDA 159 (233)
Q Consensus 138 ~~~-~gd~~~A~~~~~~al~~~~ 159 (233)
+.. .||+..|.+++++++..+-
T Consensus 249 l~~~~gd~~~a~~~L~kAL~a~p 271 (301)
T 3u64_A 249 LCIPLNNRAGFDEALDRALAIDP 271 (301)
T ss_dssp TTTTTTCHHHHHHHHHHHHHCCG
T ss_pred HHHhcCCHHHHHHHHHHHHcCCC
Confidence 877 5999999999999996543
No 213
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.55 E-value=0.0033 Score=56.74 Aligned_cols=120 Identities=7% Similarity=-0.005 Sum_probs=94.4
Q ss_pred HHcCC-HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC----------HHHHHHHHHHHHHHHHhcCChHHH
Q 026767 20 KELHN-WREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV----------PEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 20 ~~~g~-~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~----------~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
+..|. .++|+.++++++.+- + .-..+|+.-+.++. .|+ ++++++++.++++..+..
T Consensus 39 ~~~~~~~eeal~~~~~~l~~n-----P-~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~------ 106 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGAN-----P-DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS------ 106 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC------
T ss_pred HHcCCCCHHHHHHHHHHHHHC-----c-hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC------
Confidence 34444 468899999998773 2 33556777788877 566 999999999999876642
Q ss_pred HHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhC-CHHHHHHHHHHhhcC
Q 026767 88 FDLYRAATNVYIKLE--KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAN-DFKQAEKCYNDCSQV 157 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g-d~~~A~~~~~~al~~ 157 (233)
..+++.-+.++.+++ +++++++++.+++++ ......++...+.+....| .++++++++.+++..
T Consensus 107 y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~ 173 (567)
T 1dce_A 107 YGTWHHRCWLLSRLPEPNWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173 (567)
T ss_dssp HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHhh------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 357888999999999 779999999999986 2334567888889999999 899999999999843
No 214
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.51 E-value=0.0048 Score=56.88 Aligned_cols=167 Identities=11% Similarity=0.028 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc------
Q 026767 10 KHMESAAALAKELHNWREVA-DFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED------ 81 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~-~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~------ 81 (233)
..+...+..+...|+.++|. ..|++|+... | .....+...+.+.+ .|++++|...|++++......
T Consensus 344 ~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~-----P-~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~ 417 (679)
T 4e6h_A 344 EIWFNMANYQGEKNTDSTVITKYLKLGQQCI-----P-NSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALME 417 (679)
T ss_dssp HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHC-----T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHhC-----C-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 45666677777788888897 9999997643 2 12345667788888 799999999999999875311
Q ss_pred --CC--------hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh-CCHHHHHHH
Q 026767 82 --DK--------EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA-NDFKQAEKC 150 (233)
Q Consensus 82 --g~--------~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~-gd~~~A~~~ 150 (233)
.. ......++..++.+..+.|..+.|...|.+|+... +......|...+.+.... ++++.|++.
T Consensus 418 ~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~-----~~~~~~lyi~~A~lE~~~~~d~e~Ar~i 492 (679)
T 4e6h_A 418 DDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK-----KLVTPDIYLENAYIEYHISKDTKTACKV 492 (679)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG-----GGSCTHHHHHHHHHHHTTTSCCHHHHHH
T ss_pred ccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHhCCCHHHHHHH
Confidence 10 11223467777888888999999999999998641 111123444555555554 457888888
Q ss_pred HHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 151 YNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 151 ~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|++++.... .. ..+....++.. ..|+.+.|+..++++
T Consensus 493 fe~~Lk~~p--~~--~~~w~~y~~fe~~~~~~~~AR~lfera 530 (679)
T 4e6h_A 493 LELGLKYFA--TD--GEYINKYLDFLIYVNEESQVKSLFESS 530 (679)
T ss_dssp HHHHHHHHT--TC--HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHCC--Cc--hHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 888874321 11 22334444433 467888888888877
No 215
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.49 E-value=0.0023 Score=54.53 Aligned_cols=132 Identities=11% Similarity=-0.069 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH---hc-cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK---LE-KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIV 137 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~---~g-~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~ 137 (233)
.++.+|+.+|++|+++-+.... ++-.++.+|.- .+ .......-+.+++............+.++..++.+
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~------A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~ 286 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTY------ARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVS 286 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHH
Confidence 4568999999999999886532 23333333321 11 11123333344444333444556677889999999
Q ss_pred HHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc-ccccchHHHHHHhc
Q 026767 138 YLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS-AISNLDHVIIKLAR 205 (233)
Q Consensus 138 ~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ld~~~~~l~~ 205 (233)
++..|++++|...+++++.+. .+ ......+|.++ -.|++++|.+.+.++ -++..++ ...+..
T Consensus 287 ~l~~gd~d~A~~~l~rAl~Ln---~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t~~~~~ 350 (372)
T 3ly7_A 287 ALVKGKTDESYQAINTGIDLE---MS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-TLYWIE 350 (372)
T ss_dssp HHHHTCHHHHHHHHHHHHHHC---CC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-HHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHhcC---CC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-hHHHHh
Confidence 999999999999999999664 22 34456777777 689999999999999 5665554 334433
No 216
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.47 E-value=0.0023 Score=53.17 Aligned_cols=82 Identities=5% Similarity=-0.011 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYA--DAATFLLRWGLAADKCNATNSQCKAYLSAIIVYL 139 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~--~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~ 139 (233)
+++++++.++.++++..+.. ..+.+.-+.++..+|+++ ++++++.++++. ......++...+.+..
T Consensus 124 ~~~~~EL~~~~~~l~~~pkn------y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~------d~~N~sAW~~R~~ll~ 191 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKN------HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT------DLKNNSAWSHRFFLLF 191 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHhcccChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Confidence 34455555555554433321 124444444555555554 555555555532 1122233444444444
Q ss_pred hhCC------HHHHHHHHHHhh
Q 026767 140 YAND------FKQAEKCYNDCS 155 (233)
Q Consensus 140 ~~gd------~~~A~~~~~~al 155 (233)
..|+ +.++++++.+++
T Consensus 192 ~l~~~~~~~~~~eEl~~~~~aI 213 (306)
T 3dra_A 192 SKKHLATDNTIDEELNYVKDKI 213 (306)
T ss_dssp SSGGGCCHHHHHHHHHHHHHHH
T ss_pred hccccchhhhHHHHHHHHHHHH
Confidence 4444 555555555554
No 217
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.018 Score=50.37 Aligned_cols=182 Identities=9% Similarity=0.035 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH-HHHhcCCh
Q 026767 7 DAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACI-MLEEDDKE 84 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~-~~~~~g~~ 84 (233)
..++....++.+|...|++.+|......-..=....-+...-...+.....++. .+++.+|...+.++.. .+.....+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 356777889999999999999999888765433334444555666666677777 8999999999999875 45555566
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCch
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSD 164 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~ 164 (233)
...+..+.-.|.++...++|.+|..+|.++...+...++......++..+..+.+-.+....-.....+.... ....
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~~~~~~L~~~v~~~iLa~~~~~~~~ll~~~~~~---~~~~ 291 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIVYFLVLSPYGNLQNDLIHKIQND---NNLK 291 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSSCSSTTHHHHHSHHHH---SSCH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHhhc---cccc
Confidence 6667788889999999999999999999999877665554333223322222222111111000111111111 1224
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 165 QNRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 165 e~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
+-..+..|..+|..++...+...++.+
T Consensus 292 ~l~~~~~L~k~f~~~~L~~~~~~~~~~ 318 (445)
T 4b4t_P 292 KLESQESLVKLFTTNELMRWPIVQKTY 318 (445)
T ss_dssp HHHHHHHHHHHHHHCCSSSHHHHHHHT
T ss_pred ccHHHHHHHHHHHhchHhhhHHHHHHH
Confidence 455667777777666555554444443
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.27 E-value=0.022 Score=52.54 Aligned_cols=168 Identities=7% Similarity=-0.054 Sum_probs=110.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc------CCch----------HHHHHHHHHHHHhh-hCCHHHHHHHHHHH
Q 026767 12 MESAAALAKELHNWREVADFYRKASELYNEC------GRSQ----------PASDALAKAARALE-DAVPEDAIQLYTDA 74 (233)
Q Consensus 12 ~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~------g~~~----------~~a~~l~~lg~~~~-~g~~~~A~~~~~~A 74 (233)
+...+.+....|++++|...|++++...... +.+. ....++...+.... .|..+.|...|.+|
T Consensus 381 wl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A 460 (679)
T 4e6h_A 381 AFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKC 460 (679)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4566677778999999999999999875211 1111 23456666676666 68999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHH
Q 026767 75 CIMLEEDDKEQMAFDLYRAATNVYIKLE-KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYND 153 (233)
Q Consensus 75 l~~~~~~g~~~~~~~~l~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~ 153 (233)
+....... ..++...+.+-.+.+ +++.|..+|++++..+... ...+...+......|+...|+..|++
T Consensus 461 ~~~~~~~~-----~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~------~~~w~~y~~fe~~~~~~~~AR~lfer 529 (679)
T 4e6h_A 461 RRLKKLVT-----PDIYLENAYIEYHISKDTKTACKVLELGLKYFATD------GEYINKYLDFLIYVNEESQVKSLFES 529 (679)
T ss_dssp HHTGGGSC-----THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHhcCCCC-----hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc------hHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 87622221 134445566655554 5999999999999875432 12334556666778999999999999
Q ss_pred hhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 154 CSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 154 al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
++....- ...-..+.....+-- ..|+.+.+....++.
T Consensus 530 al~~~~~-~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~ 567 (679)
T 4e6h_A 530 SIDKISD-SHLLKMIFQKVIFFESKVGSLNSVRTLEKRF 567 (679)
T ss_dssp HTTTSSS-TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred HHHhcCC-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9843210 111223344444333 468877777776666
No 219
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.051 Score=47.42 Aligned_cols=111 Identities=8% Similarity=0.046 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc-Ccc
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCN-ATN 125 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~ 125 (233)
.+++...++.+|+ .|++.+|...+..-..-.....+.......+.....++...++|.+|..++.++........ .+.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 5666778899999 79999999888876533333445666677888899999999999999999999875444443 344
Q ss_pred hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCC
Q 026767 126 SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVD 158 (233)
Q Consensus 126 ~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~ 158 (233)
..+..+...|.++...++|.+|-++|.++...+
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence 556677889999999999999999999886443
No 220
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.0022 Score=55.91 Aligned_cols=123 Identities=11% Similarity=-0.038 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHc-CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHH
Q 026767 30 DFYRKASELYNEC-GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADA 107 (233)
Q Consensus 30 ~~~~~A~~l~~~~-g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A 107 (233)
+-+++.+.-+.+. ..-.....++..+|..|. .|++++|++.|.+..+.....+.. ..++..+..+++..+++..+
T Consensus 111 ~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~k---id~~l~~irl~l~~~d~~~~ 187 (429)
T 4b4t_R 111 KELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAK---IDVMLTIARLGFFYNDQLYV 187 (429)
T ss_dssp HHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSH---HHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHH---HHHHHHHHHHHHHhccHHHH
Confidence 4444555544442 222234566777888888 688888888888877766555443 24666677777888888888
Q ss_pred HHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 108 ATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 108 ~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..++.++..+....++.....+....-|.+++..++|..|-.+|-++.
T Consensus 188 ~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~ 235 (429)
T 4b4t_R 188 KEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSL 235 (429)
T ss_dssp HHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHh
Confidence 888888887777766666666666777888888888888888887765
No 221
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.15 E-value=0.055 Score=45.37 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC-HHHHHHHHHHHHHHHHhcCChH
Q 026767 10 KHMESAAALAKELH--NWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-PEDAIQLYTDACIMLEEDDKEQ 85 (233)
Q Consensus 10 ~~~~~~g~~~~~~g--~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-~~~A~~~~~~Al~~~~~~g~~~ 85 (233)
.++..-+.++...+ ++++++.++.++++... .--.++..-+.++. .|. ++++++++.++++.....
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dp------rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N---- 178 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADE------RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN---- 178 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC----
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC----
Confidence 45666677777777 48999999999988642 23456777777777 577 699999999999865532
Q ss_pred HHHHHHHHHHHHHHHh--------------ccHHHHHHHHHHHHHHHhHccCcchHHHhH-HHHHHHHHhhC--------
Q 026767 86 MAFDLYRAATNVYIKL--------------EKYADAATFLLRWGLAADKCNATNSQCKAY-LSAIIVYLYAN-------- 142 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~a~~~-~~lg~~~~~~g-------- 142 (233)
..+++..+.++..+ +.++++++++.+++.+. +.. ..++ +.-|++....|
T Consensus 179 --~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~-----P~d-~SaW~Y~r~ll~~~~~~~~~~~~~ 250 (331)
T 3dss_A 179 --YSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD-----PND-QSAWFYHRWLLGAGSGRCELSVEK 250 (331)
T ss_dssp --HHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHS-----TTC-HHHHHHHHHHHHSSSCGGGCCHHH
T ss_pred --HHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhC-----CCC-HHHHHHHHHHHHhccCccccchHH
Confidence 24677777777776 67999999999999762 222 2344 34444444433
Q ss_pred --CHHHHHHHHHHhhcCCCCCCchHHHHHHHHH---HHH-hcCCHHHHHHHHhhc-ccccchH
Q 026767 143 --DFKQAEKCYNDCSQVDAFLRSDQNRCATKLI---SAY-TEGDVEEIKRVAQSS-AISNLDH 198 (233)
Q Consensus 143 --d~~~A~~~~~~al~~~~~~~~~e~~~l~~L~---~a~-~~gd~~~a~~~~~~~-~~~~ld~ 198 (233)
-+.++++++.+.+.+..-+ ...+..++ ... ..+..+.....+.+- -++++..
T Consensus 251 ~~~l~~el~~~~elle~~pd~----~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Dp~r~ 309 (331)
T 3dss_A 251 STVLQSELESCKELQELEPEN----KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRA 309 (331)
T ss_dssp HHHHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHHhhCccc----chHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCcchh
Confidence 4789999999988443211 22233332 233 356666766666666 4555544
No 222
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.13 E-value=0.0013 Score=44.71 Aligned_cols=63 Identities=13% Similarity=-0.028 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhh-hCC---HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 49 SDALAKAARALE-DAV---PEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~---~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
+..+...|.++. .++ .++|..++++|+.+-+.. ..++..+|.++.+.|+|.+|+.+++++++.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN------EAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 456677777775 433 799999999999987754 257788999999999999999999998864
No 223
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.0054 Score=53.38 Aligned_cols=132 Identities=11% Similarity=-0.048 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
.+++..+|..|.+.|++++|+.+|.+........ . .....+..+-.++. .+++..+..++.++-.+....+++...
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~--~-~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~ 207 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST--G-AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERR 207 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC--C-SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh--H-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHH
Confidence 3456789999999999999999999987654332 2 33445555555555 899999999999999999999887777
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~ 144 (233)
.......|.++...++|.+|..+|-.+...+...+.. .........++|.+...+.
T Consensus 208 ~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~~e~~-~~~~~~~y~~l~al~~~~r 263 (429)
T 4b4t_R 208 NRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIELT-SYESIATYASVTGLFTLER 263 (429)
T ss_dssp HHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCCSCHH-HHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHhccCCccchh-hHHHHHHHHHHHHHhcCCH
Confidence 6677777888899999999999999887665433221 1222234444555544443
No 224
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=97.06 E-value=0.11 Score=43.60 Aligned_cols=191 Identities=14% Similarity=0.191 Sum_probs=132.0
Q ss_pred CCh---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC----------------
Q 026767 3 SSP---WDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DA---------------- 62 (233)
Q Consensus 3 ~~~---~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g---------------- 62 (233)
|++ +++=+.|..+.+=|..+++|++|++.....+..+.+.|....++..-.-+-.+|. .+
T Consensus 26 G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~ 105 (336)
T 3lpz_A 26 GQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLR 105 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred CCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 566 8888889999988888999999999988888888888887776665544444444 21
Q ss_pred -----CHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHH----H--------HHHHhHccCc
Q 026767 63 -----VPEDAIQLYTDACIMLEEDD-KEQMAFDLYRAATNVYIKLEKYADAATFLLR----W--------GLAADKCNAT 124 (233)
Q Consensus 63 -----~~~~A~~~~~~Al~~~~~~g-~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~----a--------l~~~~~~~~~ 124 (233)
++ .=..+..+|+.+....| .+.+--..+..+|.+|.+.++|.+|..+|-- + .+.+.. ..
T Consensus 106 ~~~~~~p-~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~-~~- 182 (336)
T 3lpz_A 106 LFQPGEP-VRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQ-DE- 182 (336)
T ss_dssp TSCTTCH-HHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHT-SC-
T ss_pred hCCCCCc-HHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHh-cC-
Confidence 22 22456677777777654 2344446778899999999999999888731 1 111122 22
Q ss_pred chHHHhH-HHHHHHHHhhCCHHHHHHHHHHhhc-----CCC---------------CCCchHHHHHHHHHHHHhcCCHHH
Q 026767 125 NSQCKAY-LSAIIVYLYANDFKQAEKCYNDCSQ-----VDA---------------FLRSDQNRCATKLISAYTEGDVEE 183 (233)
Q Consensus 125 ~~~a~~~-~~lg~~~~~~gd~~~A~~~~~~al~-----~~~---------------~~~~~e~~~l~~L~~a~~~gd~~~ 183 (233)
+.+...+ ....+.|+..++...|...+..... .+. |....--.++.-|..+++.+..+.
T Consensus 183 ~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~l 262 (336)
T 3lpz_A 183 SHTAPLYCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDL 262 (336)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHH
T ss_pred CccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHH
Confidence 3444444 6777888999999999997766552 121 111333457777888888899999
Q ss_pred HHHHHhhc--ccccc
Q 026767 184 IKRVAQSS--AISNL 196 (233)
Q Consensus 184 a~~~~~~~--~~~~l 196 (233)
+...++.| .+++.
T Consensus 263 F~~L~~~Y~~~l~rd 277 (336)
T 3lpz_A 263 FRQLKSKYEANLNEL 277 (336)
T ss_dssp HHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHHHHHhc
Confidence 99999988 55543
No 225
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.05 E-value=0.0036 Score=51.54 Aligned_cols=84 Identities=12% Similarity=-0.018 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhh------CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 026767 25 WREVADFYRKASELYNECGRSQPASDALAKAARALED------AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVY 98 (233)
Q Consensus 25 ~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~------g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~ 98 (233)
..+|...+++|+++- .....+.++.-+|.+|.. |+.++|.++|++|+++.+..+ ..+..-+|+.+
T Consensus 179 l~~A~a~lerAleLD----P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~-----id~~v~YA~~l 249 (301)
T 3u64_A 179 VHAAVMMLERACDLW----PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD-----PDHHITYADAL 249 (301)
T ss_dssp HHHHHHHHHHHHHHC----TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC-----SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC----CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC-----chHHHHHHHHH
Confidence 467888888888773 233467789999999995 899999999999999998532 24677899999
Q ss_pred HHh-ccHHHHHHHHHHHHHH
Q 026767 99 IKL-EKYADAATFLLRWGLA 117 (233)
Q Consensus 99 ~~~-g~~~~A~~~~~~al~~ 117 (233)
+.. |++++|..++++++.+
T Consensus 250 ~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 250 CIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp TTTTTCHHHHHHHHHHHHHC
T ss_pred HHhcCCHHHHHHHHHHHHcC
Confidence 884 9999999999999975
No 226
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.95 E-value=0.034 Score=41.18 Aligned_cols=82 Identities=15% Similarity=0.055 Sum_probs=58.7
Q ss_pred cCCchHHHHHHHHHHHHhh-hC---CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 42 CGRSQPASDALAKAARALE-DA---VPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 42 ~g~~~~~a~~l~~lg~~~~-~g---~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.|... ..+..+.|.++. .. +.++++..++..++.. .+..-.+|+.++|..+.++|+|++|..++++++++
T Consensus 27 ~~~~~--~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 27 AGSVS--KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp TTCCC--HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cCCCc--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 45543 455666776666 34 6779999999988753 22233479999999999999999999999999976
Q ss_pred HhHccCcchHHHhHHH
Q 026767 118 ADKCNATNSQCKAYLS 133 (233)
Q Consensus 118 ~~~~~~~~~~a~~~~~ 133 (233)
...+.++..+..
T Consensus 101 ----eP~n~QA~~Lk~ 112 (152)
T 1pc2_A 101 ----EPQNNQAKELER 112 (152)
T ss_dssp ----CTTCHHHHHHHH
T ss_pred ----CCCCHHHHHHHH
Confidence 333455554433
No 227
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.89 E-value=0.0087 Score=50.65 Aligned_cols=126 Identities=6% Similarity=-0.012 Sum_probs=70.1
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-C-CHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 12 MESAAALAKELH-NWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-A-VPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 12 ~~~~g~~~~~~g-~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-g-~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
++.-+.++...+ ++++++.++++++... + .-..+++.-+.++. . + +++++++++.++++.....
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~n-----P-Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN------ 158 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQN-----L-KSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN------ 158 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTT-----C-CCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC------
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhC-----C-CcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC------
Confidence 444444444444 3555555555554321 1 22334444455555 3 4 6666666666666433221
Q ss_pred HHHHHHHHHHHHHhccHH--------HHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC-------HHHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYA--------DAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAND-------FKQAEKCYN 152 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~--------~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd-------~~~A~~~~~ 152 (233)
..+.+.-+.++..+|+++ +++++++++++. ......++...+.+....++ +.++++++.
T Consensus 159 y~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~------dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~ 232 (349)
T 3q7a_A 159 YHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV------DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYIL 232 (349)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 235666666666666666 777777777754 22334456666677766665 567777776
Q ss_pred Hhh
Q 026767 153 DCS 155 (233)
Q Consensus 153 ~al 155 (233)
+++
T Consensus 233 ~aI 235 (349)
T 3q7a_A 233 KSI 235 (349)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 228
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=96.87 E-value=0.037 Score=46.00 Aligned_cols=132 Identities=8% Similarity=-0.034 Sum_probs=109.0
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYI 99 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~ 99 (233)
..|+|=||.+.|+--..-|.+.++...+...+..-+..+. .|++.-|.....--++.++..+..... ....++..++.
T Consensus 25 ~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~-~~~~rl~~l~~ 103 (312)
T 2wpv_A 25 KAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDD-ISVARLVRLIA 103 (312)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSH-HHHHHHHHHHT
T ss_pred hccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH-HHHHHHHHHHH
Confidence 3699999999999999999999999999999999999888 799999999999999999998866554 36778888876
Q ss_pred HhccHH-HHHHHHHHHHHHHhHccC-cchHHHhHHHHHHHHHhhCCHHHHHHHHHH
Q 026767 100 KLEKYA-DAATFLLRWGLAADKCNA-TNSQCKAYLSAIIVYLYANDFKQAEKCYND 153 (233)
Q Consensus 100 ~~g~~~-~A~~~~~~al~~~~~~~~-~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~ 153 (233)
....-+ .=..+..+++....+.+. ..+....+..+|..+...|++.+|+.+|-.
T Consensus 104 ~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~ 159 (312)
T 2wpv_A 104 ELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFML 159 (312)
T ss_dssp TCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHh
Confidence 643222 235777888888877755 566667789999999999999999999863
No 229
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.83 E-value=0.022 Score=48.12 Aligned_cols=160 Identities=8% Similarity=-0.004 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC-CHHHHHHHHHHHHHHHHhcCChHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DA-VPEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g-~~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
.++..+..+....+..++|+.++++++.+-- .-..+++.-+.++. .+ .+++++.++.+++...+..
T Consensus 55 ~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP------~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn------ 122 (349)
T 3q7a_A 55 DAMDYFRAIAAKEEKSERALELTEIIVRMNP------AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS------ 122 (349)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhCc------hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc------
Confidence 4455555566667777899999999988742 23456777888888 67 6999999999999766643
Q ss_pred HHHHHHHHHHHHHh-c-cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHH--------HHHHHHHHhhc-
Q 026767 88 FDLYRAATNVYIKL-E-KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFK--------QAEKCYNDCSQ- 156 (233)
Q Consensus 88 ~~~l~~lg~~~~~~-g-~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~--------~A~~~~~~al~- 156 (233)
..+.+.-+.++..+ + +++++++++.++++. .+....++...+.+....|.+. ++++++++++.
T Consensus 123 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~------dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 123 YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP------DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS------CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 25777888888887 7 899999999998853 2233456666777777777766 89999999883
Q ss_pred CCCCCCchHHHHHHHHHHHH-hcCC-------HHHHHHHHhhcc
Q 026767 157 VDAFLRSDQNRCATKLISAY-TEGD-------VEEIKRVAQSSA 192 (233)
Q Consensus 157 ~~~~~~~~e~~~l~~L~~a~-~~gd-------~~~a~~~~~~~~ 192 (233)
.++. ..+....+.++ ..+. .+++.+++.+++
T Consensus 197 dp~N-----~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI 235 (349)
T 3q7a_A 197 DGRN-----NSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSI 235 (349)
T ss_dssp CTTC-----HHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCC-----HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 3322 23333334444 2332 456666666663
No 230
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0038 Score=55.33 Aligned_cols=143 Identities=8% Similarity=0.034 Sum_probs=101.1
Q ss_pred HHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 40 NECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEED-DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 40 ~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~-g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
.-..|..+++.+++-+=..|. .+.|++|..+..++. |++. ....+.+.-+.-+|.++.-.++|.+|.+++..|+..
T Consensus 222 ~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 222 SLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp CSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred hcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 335678899999999999998 799999999999985 5544 344455677888999999999999999999999865
Q ss_pred HhHccCc-chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 118 ADKCNAT-NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 118 ~~~~~~~-~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
+...... ...-.++..+..|.+-+|+.++ +..|.+. .. .........|..+++.||...+...++..
T Consensus 300 ap~~~~a~gfr~~a~K~lI~V~LLlG~iP~-r~lf~q~----~l--~~~L~pY~~Lv~Avr~GdL~~F~~~L~~h 367 (523)
T 4b4t_S 300 APHNSKSLGFLQQSNKLHCCIQLLMGDIPE-LSFFHQS----NM--QKSLLPYYHLTKAVKLGDLKKFTSTITKY 367 (523)
T ss_dssp CSCSSSCSHHHHHHHHHHHHHHHHHTCCCC-HHHHTTT----SC--HHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCcchhhhhHHHHHHHHHHhHHhhcCCCCC-hHHhhch----hH--HHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 4322211 1223445566777777788654 2222221 11 11234456788899999999999988877
No 231
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.74 E-value=0.03 Score=47.01 Aligned_cols=117 Identities=9% Similarity=-0.046 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hC--CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 026767 25 WREVADFYRKASELYNECGRSQPASDALAKAARALE-DA--VPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKL 101 (233)
Q Consensus 25 ~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g--~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~ 101 (233)
+++++.++++++... ..-..+++.-+.++. .+ .+++++.++.+++++.+.. ..+.+.-+.++...
T Consensus 90 l~~EL~~~~~~L~~~------PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN------y~AW~~R~~vl~~l 157 (331)
T 3dss_A 90 VKAELGFLESCLRVN------PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN------FHCWDYRRFVAAQA 157 (331)
T ss_dssp HHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC------CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHh
Confidence 466777777776542 234556777777777 56 5899999999999876542 25788888898999
Q ss_pred cc-HHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhh--------------CCHHHHHHHHHHhh-cCCC
Q 026767 102 EK-YADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYA--------------NDFKQAEKCYNDCS-QVDA 159 (233)
Q Consensus 102 g~-~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--------------gd~~~A~~~~~~al-~~~~ 159 (233)
|+ ++++++++.+++.. .+....++...+.+.... +.+.++++++.+++ ..|.
T Consensus 158 ~~~~~eel~~~~~~I~~------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~ 225 (331)
T 3dss_A 158 AVAPAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPN 225 (331)
T ss_dssp TCCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTT
T ss_pred CcCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCC
Confidence 98 69999999999965 233344666666666655 55889999999998 4443
No 232
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.67 E-value=0.039 Score=39.50 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhccHHH---HHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchH
Q 026767 89 DLYRAATNVYIKLEKYAD---AATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQ 165 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~---A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e 165 (233)
.+.+++|+.+++...... ++.+++..+. . +.+...-.+++.++..+.+.|+|.+|+++++..+.+.. ...+
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~---~-~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP--~n~Q 109 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLP---K-GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP--QNNQ 109 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT---T-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---c-CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC--CCHH
Confidence 688999999998876666 8888886553 2 22224446789999999999999999999999985431 3467
Q ss_pred HHHHHHHHH
Q 026767 166 NRCATKLIS 174 (233)
Q Consensus 166 ~~~l~~L~~ 174 (233)
+..|..+++
T Consensus 110 A~~Lk~~i~ 118 (126)
T 1nzn_A 110 AKELERLID 118 (126)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777765
No 233
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.50 E-value=0.11 Score=46.02 Aligned_cols=97 Identities=10% Similarity=0.013 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchH
Q 026767 49 SDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQ 127 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 127 (233)
..+++.+-..|. .|++++|.+.+++.. ..|-.... .+++.+-..|.+.|+.++|.++|++... .|..+..
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~----~~g~~Pd~-~tyn~lI~~~~~~g~~~~A~~l~~~M~~----~G~~Pd~ 175 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMK----AFGIQPRL-RSYGPALFGFCRKGDADKAYEVDAHMVE----SEVVPEE 175 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH----HTTCCCCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCCCCH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHH----HcCCCCcc-ceehHHHHHHHHCCCHHHHHHHHHHHHh----cCCCCCH
Confidence 346777777777 799999999988754 33422222 4789999999999999999999998763 3444443
Q ss_pred HHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 128 CKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 128 a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
.+|..+..++...|+.++|.+.|++..
T Consensus 176 -~ty~~Li~~~~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 176 -PELAALLKVSMDTKNADKVYKTLQRLR 202 (501)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 479999999999999999999999865
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.35 E-value=0.041 Score=40.72 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=70.6
Q ss_pred HHHHHhh-hCCH------HHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc
Q 026767 54 KAARALE-DAVP------EDAIQLYTDACIMLEEDDK--EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT 124 (233)
Q Consensus 54 ~lg~~~~-~g~~------~~A~~~~~~Al~~~~~~g~--~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 124 (233)
......+ .|++ ++-++.|++|+.-.+.... .+.=+..+.+.+.. ...++.++|.+.|+.++.++.+
T Consensus 18 ~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk---- 92 (161)
T 4h7y_A 18 SLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK---- 92 (161)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT----
T ss_pred HHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH----
Confidence 3344444 4666 6777888888887765432 22223466667755 5679999999999999986322
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
. ++++...+.-..++|+..+|++.+.+++..
T Consensus 93 F--AKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 93 F--AFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp B--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred H--HHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 2 888888888899999999999999999853
No 235
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=96.23 E-value=0.22 Score=41.75 Aligned_cols=131 Identities=14% Similarity=0.005 Sum_probs=107.2
Q ss_pred HcCCH---HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 026767 21 ELHNW---REVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATN 96 (233)
Q Consensus 21 ~~g~~---~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~ 96 (233)
..|+| =||.+.|+.-..-|.+.++...+...+..-+..+. .|++.-|.+...--++.+.+.+.+... ....++..
T Consensus 24 ~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~-~~~~rL~~ 102 (336)
T 3lpz_A 24 AEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDG-ASRGKLLG 102 (336)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH-HHHHHHHH
T ss_pred hCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH-HHHHHHHH
Confidence 47999 89999999999999999999999999999999888 799999999999999999998855443 47778888
Q ss_pred HHHHhccHH-HHHHHHHHHHHHHhHcc-CcchHHHhHHHHHHHHHhhCCHHHHHHHHH
Q 026767 97 VYIKLEKYA-DAATFLLRWGLAADKCN-ATNSQCKAYLSAIIVYLYANDFKQAEKCYN 152 (233)
Q Consensus 97 ~~~~~g~~~-~A~~~~~~al~~~~~~~-~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~ 152 (233)
++.....-+ .=..+..+++....+.+ .+.+-...+..+|.++...+++.+|+.+|-
T Consensus 103 L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 103 CLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 877665321 22557777888777654 356666777899999999999999999984
No 236
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.05 E-value=0.31 Score=42.90 Aligned_cols=147 Identities=10% Similarity=-0.008 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHH-------------------
Q 026767 27 EVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQM------------------- 86 (233)
Q Consensus 27 eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~------------------- 86 (233)
.....|++|+.... .....+...+..+. .|++++|...|++|+.. +.......
T Consensus 197 Rv~~~ye~al~~~p------~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~ 269 (493)
T 2uy1_A 197 RMHFIHNYILDSFY------YAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKY 269 (493)
T ss_dssp HHHHHHHHHHHHTT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHH
Confidence 45567777776542 11566777777777 68899999999998877 43321110
Q ss_pred ---------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhC-CHHHHHHH
Q 026767 87 ---------------AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAN-DFKQAEKC 150 (233)
Q Consensus 87 ---------------~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g-d~~~A~~~ 150 (233)
...++...+.+..+.++.+.|...|+++ . . . .....++...+.+....+ +++.|+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~---~-~--~~~~~v~i~~A~lE~~~~~d~~~ar~i 342 (493)
T 2uy1_A 270 SMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G---N-E--GVGPHVFIYCAFIEYYATGSRATPYNI 342 (493)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T---T-S--CCCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h---C-C--CCChHHHHHHHHHHHHHCCChHHHHHH
Confidence 1123444455555678888899999888 2 1 1 112345555555555445 79999999
Q ss_pred HHHhhcCCCCCCchHHHHHHHHHHHH-hcCCHHHHHHHHhhc
Q 026767 151 YNDCSQVDAFLRSDQNRCATKLISAY-TEGDVEEIKRVAQSS 191 (233)
Q Consensus 151 ~~~al~~~~~~~~~e~~~l~~L~~a~-~~gd~~~a~~~~~~~ 191 (233)
|+.++.... ...+ .....++-. ..||.+.++..+++.
T Consensus 343 fe~al~~~~--~~~~--~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 343 FSSGLLKHP--DSTL--LKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHCT--TCHH--HHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHCC--CCHH--HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999984321 1111 222234433 567777777666664
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.97 E-value=0.95 Score=41.43 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHH
Q 026767 90 LYRAATNVYIKLEKYADAATFLLR 113 (233)
Q Consensus 90 ~l~~lg~~~~~~g~~~~A~~~~~~ 113 (233)
.+.++|..+.+.++++.|..+|.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~ 706 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTN 706 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 455666666666666666666654
No 238
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.51 E-value=0.44 Score=34.29 Aligned_cols=80 Identities=8% Similarity=-0.023 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCch
Q 026767 88 FDLYRAATNVYIKLE---KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSD 164 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~ 164 (233)
..+..++++.+++.. +..+++.+++..+. .. +...-.+++.+++.+.+.|+|.+|+++.+..+.+. ....
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~---~~--~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e--P~N~ 112 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK---EA--ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE--RNNK 112 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH---HC--GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--TTCH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---cC--cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC--CCCH
Confidence 368899999999876 45578888886654 22 22344578999999999999999999999998553 1346
Q ss_pred HHHHHHHHHH
Q 026767 165 QNRCATKLIS 174 (233)
Q Consensus 165 e~~~l~~L~~ 174 (233)
++..|..+++
T Consensus 113 QA~~Lk~~Ie 122 (134)
T 3o48_A 113 QVGALKSMVE 122 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777775
No 239
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.01 E-value=0.95 Score=38.66 Aligned_cols=170 Identities=12% Similarity=0.118 Sum_probs=107.5
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHc-----------CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCC-
Q 026767 17 ALAKELHNWREVADFYRKASELYNEC-----------GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDK- 83 (233)
Q Consensus 17 ~~~~~~g~~~eA~~~~~~A~~l~~~~-----------g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~- 83 (233)
.+.....++++|+++.++......+. ........+...++..|. .++.++|..+.+++-.+....++
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 34566788999999887764433221 122344556667788888 79999999999999999888764
Q ss_pred -hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc-chHHHh-HHHHHHHHH-hhCCHHHHHHHHHHhhcCCC
Q 026767 84 -EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT-NSQCKA-YLSAIIVYL-YANDFKQAEKCYNDCSQVDA 159 (233)
Q Consensus 84 -~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~a~~-~~~lg~~~~-~~gd~~~A~~~~~~al~~~~ 159 (233)
+...+..+...+..+...++|..+...+-..+..+...... ...... ...++.+-+ .-+-+ .|.+.+..+.
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~all~~~i~-----~f~eLL~~p~ 238 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIY-----NFGELLHHPI 238 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSSCSHHHHHHHHHHHHHHHHHCCSSC-----STHHHHHSCC
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHcCCCCC-----ChHHHhCChH
Confidence 33445566777888888999999888888887766533221 111111 123333222 22211 1222232332
Q ss_pred C---CCchHHHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 160 F---LRSDQNRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 160 ~---~~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
. ....+...+..|..++..||...+...++..
T Consensus 239 i~~L~~~~~~~~l~~Ll~~f~~g~~~~f~~~~~~~ 273 (393)
T 4b4t_O 239 METIVNDSNYDWLFQLLNALTVGDFDKFDSLIKVQ 273 (393)
T ss_dssp TTSSCSSSSTTHHHHHHHHHHHTCHHHHHHHCCHH
T ss_pred HHHhhcCCchHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 2 2344556777899999999999998876544
No 240
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.01 E-value=0.3 Score=36.06 Aligned_cols=100 Identities=12% Similarity=0.005 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCH------HHHHHHHHHHHHHHH--HcCCchHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhcCCh
Q 026767 13 ESAAALAKELHNW------REVADFYRKASELYN--ECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEEDDKE 84 (233)
Q Consensus 13 ~~~g~~~~~~g~~------~eA~~~~~~A~~l~~--~~g~~~~~a~~l~~lg~~~~~g~~~~A~~~~~~Al~~~~~~g~~ 84 (233)
.......-..|++ ++-++.|++|..... +...-..=+..+.+-+.....+|+++|.+.|+.++.+ ...
T Consensus 17 ~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~---hKk- 92 (161)
T 4h7y_A 17 LSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN---CKK- 92 (161)
T ss_dssp HHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH---CTT-
T ss_pred HHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH---hHH-
Confidence 3333444445888 888899999988642 2445556677777888664479999999999999997 222
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
. +.++...+.+-+++|+..+|...+.+|+.++
T Consensus 93 -F-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 93 -F-AFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp -B-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred -H-HHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 2 6799999999999999999999999999753
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.95 E-value=0.31 Score=41.56 Aligned_cols=89 Identities=12% Similarity=0.017 Sum_probs=66.3
Q ss_pred hCCHHHHHHHHHHHHHHHHhc------CChH----------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCc
Q 026767 61 DAVPEDAIQLYTDACIMLEED------DKEQ----------MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNAT 124 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~~------g~~~----------~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 124 (233)
.|+++.|+..+++|+.+++.. +..+ ....++..++..+...|++.+|+..+++.+.. ++
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~-----~P 202 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE-----HP 202 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----ST
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----CC
Confidence 478888888899998887642 1111 11135666778888999999999999988754 23
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
..+ ..+..+..++...|+..+|++.|+++.
T Consensus 203 ~~E-~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 203 YRE-PLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp TCH-HHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 222 367888899999999999999999875
No 242
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.89 E-value=0.086 Score=46.69 Aligned_cols=62 Identities=10% Similarity=0.056 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 026767 49 SDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGL 116 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~ 116 (233)
-+++..+|.+.. ...+..|..||.+|+.+.+..| ..++.+|.+....|+.-+|+-+|.+++.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G------~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG------QPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS------HHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC------chHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 357888999988 8899999999999999999988 5788999999999999999999999874
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.87 E-value=0.39 Score=40.90 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=72.2
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCchH--------H----------HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh
Q 026767 20 KELHNWREVADFYRKASELYNECGRSQP--------A----------SDALAKAARALE-DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 20 ~~~g~~~eA~~~~~~A~~l~~~~g~~~~--------~----------a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~ 80 (233)
...|++++|.+.+++|+.+|+ |++.. . ..++..++..+. .|++++++..+.+.+...+-
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~r--G~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~ 203 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWR--GPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY 203 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCC--SSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HhCCCHHHHHHHHHHHHHhcC--CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 346899999999999999984 33211 1 123444455566 69999999999998877653
Q ss_pred cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh-HccCcch
Q 026767 81 DDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAAD-KCNATNS 126 (233)
Q Consensus 81 ~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~ 126 (233)
.. ..+..+-.++...|+..+|+..|++....+. +.|..++
T Consensus 204 ~E------~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 204 RE------PLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp CH------HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred CH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 22 3677788889999999999999999887553 4555544
No 244
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=94.66 E-value=0.79 Score=32.65 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h---CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 026767 26 REVADFYRKASELYNECGRSQPASDALAKAARALE-D---AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKL 101 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~---g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~ 101 (233)
..+...|.++.. .|.+.. .+..+.|..+. - .+..++|..++..+. . +.+...-.|+..+|..+.++
T Consensus 18 ~~~~~~y~~e~~----~~~~s~--~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~---~-~~p~~~Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 18 LKFEKKFQSEKA----AGSVSK--STQFEYAWCLVRTRYNDDIRKGIVLLEELLP---K-GSKEEQRDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHH----HSCCCH--HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT---T-SCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc----cCCCcH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---c-CCcchHHHHHHHHHHHHHHh
Confidence 344444544432 355544 44555555555 2 344457777766443 2 22334457999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHH
Q 026767 102 EKYADAATFLLRWGLAADKCNATNSQCKAYLSAI 135 (233)
Q Consensus 102 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg 135 (233)
|+|++|..+++..+++ ...+.++..+..+.
T Consensus 88 g~Y~~A~~~~~~lL~~----eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQT----EPQNNQAKELERLI 117 (126)
T ss_dssp TCHHHHHHHHHHHHHH----CTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHh----CCCCHHHHHHHHHH
Confidence 9999999999999865 33445666554443
No 245
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.58 E-value=0.85 Score=41.76 Aligned_cols=15 Identities=20% Similarity=0.277 Sum_probs=7.5
Q ss_pred HHHhccHHHHHHHHH
Q 026767 98 YIKLEKYADAATFLL 112 (233)
Q Consensus 98 ~~~~g~~~~A~~~~~ 112 (233)
+.+.|++++|+++|.
T Consensus 746 ~~~~g~~~~a~~~~~ 760 (814)
T 3mkq_A 746 YWIAGDIQGAKDLLI 760 (814)
T ss_dssp HHHHTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 344555555555553
No 246
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.26 E-value=1.1 Score=32.63 Aligned_cols=80 Identities=8% Similarity=-0.012 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCch
Q 026767 88 FDLYRAATNVYIKLE---KYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSD 164 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~ 164 (233)
..+.+++++++++.. +..+++.+++..+. .... ..-.+++.++..+.++|+|.+|+++.+..+.+.- ...
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~---~~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP--~n~ 111 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK---EAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER--NNK 111 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH---HCCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCC--CCH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---cCcc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CcH
Confidence 468899999999876 44578888886654 3222 3445789999999999999999999999985531 346
Q ss_pred HHHHHHHHHH
Q 026767 165 QNRCATKLIS 174 (233)
Q Consensus 165 e~~~l~~L~~ 174 (233)
++..|..+++
T Consensus 112 QA~~Lk~~Ie 121 (144)
T 1y8m_A 112 QVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777765
No 247
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.25 E-value=1.3 Score=33.47 Aligned_cols=123 Identities=12% Similarity=0.123 Sum_probs=68.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
.|+++.|.+..++. ++ -..|.++|.... .|+++-|..+|.++- -+..+..+|.-
T Consensus 18 lg~l~~A~e~a~~l-------~~----~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~--------------D~~~L~~Ly~~ 72 (177)
T 3mkq_B 18 YGNLDAALDEAKKL-------ND----SITWERLIQEALAQGNASLAEMIYQTQH--------------SFDKLSFLYLV 72 (177)
T ss_dssp TTCHHHHHHHHHHH-------CC----HHHHHHHHHHHHHTTCHHHHHHHHHHTT--------------CHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHh-------CC----HHHHHHHHHHHHHcCChHHHHHHHHHhC--------------CHHHHHHHHHH
Confidence 56666666554322 22 346777777777 677777777776552 12234444555
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHHhcCC
Q 026767 101 LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGD 180 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~~~gd 180 (233)
.|+-++=. +..+++...++ ++....+++.+||++++.+.|.+.-.. .++.++ +-..|-
T Consensus 73 tg~~e~L~----kla~iA~~~g~-------~n~af~~~l~lGdv~~~i~lL~~~~r~------~eA~~~-----A~t~g~ 130 (177)
T 3mkq_B 73 TGDVNKLS----KMQNIAQTRED-------FGSMLLNTFYNNSTKERSSIFAEGGSL------PLAYAV-----AKANGD 130 (177)
T ss_dssp HTCHHHHH----HHHHHHHHTTC-------HHHHHHHHHHHTCHHHHHHHHHHTTCH------HHHHHH-----HHHTTC
T ss_pred hCCHHHHH----HHHHHHHHCcc-------HHHHHHHHHHcCCHHHHHHHHHHCCCh------HHHHHH-----HHHcCc
Confidence 55554333 22223222222 344556778889999999988876322 233222 112566
Q ss_pred HHHHHHHHhhc
Q 026767 181 VEEIKRVAQSS 191 (233)
Q Consensus 181 ~~~a~~~~~~~ 191 (233)
.+.|.+..++.
T Consensus 131 ~~~a~~~~~~~ 141 (177)
T 3mkq_B 131 EAAASAFLEQA 141 (177)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66666666655
No 248
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.98 E-value=0.56 Score=43.63 Aligned_cols=87 Identities=13% Similarity=0.047 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHHHHH----hcC--C------hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHH
Q 026767 62 AVPEDAIQLYTDACIMLE----EDD--K------EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCK 129 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~----~~g--~------~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~ 129 (233)
.+--+|+....++++-.. ... + ....+..+.-.+.++...|+|+-|+.+.++|+.+ .+..-.
T Consensus 299 ~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~------aPseF~ 372 (754)
T 4gns_B 299 TKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL------ALDSFE 372 (754)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSSCHH
T ss_pred hhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc------CchhhH
Confidence 344567777777775321 111 1 1112346777899999999999999999999976 456677
Q ss_pred hHHHHHHHHHhhCCHHHHHHHHHHh
Q 026767 130 AYLSAIIVYLYANDFKQAEKCYNDC 154 (233)
Q Consensus 130 ~~~~lg~~~~~~gd~~~A~~~~~~a 154 (233)
++..|+.||..+|||+.|+-.++-+
T Consensus 373 tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 373 SWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhccHHHHHHHHhcC
Confidence 8999999999999999999888765
No 249
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.98 E-value=0.88 Score=39.97 Aligned_cols=124 Identities=6% Similarity=0.004 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h-CCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-D-AVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
...|...+....+.++.+.|...|++| . ..+ . ...++...+.+-. . ++++.|...|+++++.+....
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A-~---~~~-~--~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~---- 354 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL-G---NEG-V--GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDST---- 354 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH-T---TSC-C--CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCH----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh-h---CCC-C--ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCH----
Confidence 355666666666667788888888877 2 111 1 2345555555444 3 468888888888888764321
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 87 AFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 87 ~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
......+.+....|+.+.|..+|+++.. ....+......-...|+...+...+++++
T Consensus 355 --~~~~~yid~e~~~~~~~~aR~l~er~~k----------~~~lw~~~~~fE~~~G~~~~~r~v~~~~~ 411 (493)
T 2uy1_A 355 --LLKEEFFLFLLRIGDEENARALFKRLEK----------TSRMWDSMIEYEFMVGSMELFRELVDQKM 411 (493)
T ss_dssp --HHHHHHHHHHHHHTCHHHHHHHHHHSCC----------BHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1234466777788888888888887620 12233333344445588888888887776
No 250
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.83 E-value=0.29 Score=43.34 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
+-+.+..+|.+.+-...++.|..||.+|..+.-..|.+ ++.+|.+.. .|+.-+|+-+|.||+.
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~------~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQP------YNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHH------HHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCch------HHHHHHHHhcccccHHHHHHHHHHHh
Confidence 44678899999999999999999999999998666654 788999999 8999999999999984
No 251
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.54 E-value=2.1 Score=41.34 Aligned_cols=100 Identities=13% Similarity=0.083 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchH
Q 026767 49 SDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQ 127 (233)
Q Consensus 49 a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 127 (233)
-..++-+-..|- .|+.++|...+.+-.++....-.+ . ..+++.+-.-|++.|+.++|.++|++.. +.|-.+..
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-d-vvTYNtLI~Glck~G~~~eA~~Lf~eM~----~~G~~PDv 200 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-T-LDMYNAVMLGWARQGAFKELVYVLFMVK----DAGLTPDL 200 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-C-HHHHHHHHHHHHHHTCHHHHHHHHHHHH----HTTCCCCH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-C-HhHHHHHHHHHHhCCCHHHHHHHHHHHH----HcCCCCcH
Confidence 345666666666 688888888887654443221111 1 2478888888888999999998888775 33544443
Q ss_pred HHhHHHHHHHHHhhCC-HHHHHHHHHHhh
Q 026767 128 CKAYLSAIIVYLYAND-FKQAEKCYNDCS 155 (233)
Q Consensus 128 a~~~~~lg~~~~~~gd-~~~A~~~~~~al 155 (233)
.+|+.+..++.+.|+ .++|.+.|++..
T Consensus 201 -vTYntLI~glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 201 -LSYAAALQCMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp -HHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 468888888888887 467888887765
No 252
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=92.47 E-value=4.9 Score=34.79 Aligned_cols=126 Identities=10% Similarity=0.053 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC-HHHHHHHHHHHHHHHHhcCChHHH
Q 026767 10 KHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-PEDAIQLYTDACIMLEEDDKEQMA 87 (233)
Q Consensus 10 ~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-~~~A~~~~~~Al~~~~~~g~~~~~ 87 (233)
-+..++.+.|+..++.+-=+.|+.+-.+++.+.++...+|.++.-.+.++. ... .-.++. .. .-++..-.....
T Consensus 16 ~~~~~l~~~y~~~~~~el~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~---~~-~~~~~qt~~~~k 91 (436)
T 2yin_A 16 SCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVM---QT-GQQHPQTHRQLK 91 (436)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC------------------CHHHHH
T ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccc---cC-CCCccccHHHHH
Confidence 355688899999999999999999999999999999999999988888777 322 111110 00 001111011111
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc-cCcchHHHhHHHHHHHHH
Q 026767 88 FDLYRAATNVYIKLEKYADAATFLLRWGLAADKC-NATNSQCKAYLSAIIVYL 139 (233)
Q Consensus 88 ~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~a~~~~~lg~~~~ 139 (233)
-..+..+...+.+-+.|+.|+.+|+..+..++.. .+....+.++..++.+|.
T Consensus 92 e~L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~ 144 (436)
T 2yin_A 92 ETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYE 144 (436)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1357778888888899999999999999988874 555555555555555553
No 253
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.18 Score=44.66 Aligned_cols=133 Identities=9% Similarity=0.049 Sum_probs=63.1
Q ss_pred HcCCHHHHHHHHHHHH--HHHHHc----CCchHHHHHHHHHHHHhh-hCCHHHHH----------HHHHHHHHHHHhcCC
Q 026767 21 ELHNWREVADFYRKAS--ELYNEC----GRSQPASDALAKAARALE-DAVPEDAI----------QLYTDACIMLEEDDK 83 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~--~l~~~~----g~~~~~a~~l~~lg~~~~-~g~~~~A~----------~~~~~Al~~~~~~g~ 83 (233)
..+++++|..+-.... ...... =|. -+|++|.=.+.+++ .|.....+ ..+..++....-..+
T Consensus 148 d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~-l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D 226 (523)
T 4b4t_S 148 DSKELEQLVEFNRKVVIPNLLCYYNLRSLNL-INAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHD 226 (523)
T ss_dssp --------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSS
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhHHhHHH-HHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccC
Confidence 4677888888776555 222222 222 36677777777777 56655432 233344444433445
Q ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHc-cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 84 EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKC-NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 84 ~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
..+.+.+++-+-+.|+..+.|++|..+..++. +-.. ......++-++.+|.++..+++|.+|.+++..|+.
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56667799999999999999999999998874 2221 12223355569999999999999999999999984
No 254
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=92.05 E-value=0.56 Score=31.30 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=28.8
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026767 3 SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNE 41 (233)
Q Consensus 3 ~~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~ 41 (233)
.++...|-.+..-+..+...|+|++||.++++|+.+..+
T Consensus 9 ~spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 9 EGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 356666777777777777788888888888888776543
No 255
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=91.46 E-value=2.9 Score=30.00 Aligned_cols=85 Identities=18% Similarity=0.011 Sum_probs=56.3
Q ss_pred cCCchHHHHHHHHHHHHhh-h-CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Q 026767 42 CGRSQPASDALAKAARALE-D-AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAAD 119 (233)
Q Consensus 42 ~g~~~~~a~~l~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~ 119 (233)
.|.+...+..-.-.|.+.. . .+..++|..++..+. .. +...-.|+.-++..+.++|+|++|..+.+..+.+
T Consensus 35 ~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~---~~--~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~-- 107 (134)
T 3o48_A 35 GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK---EA--ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH-- 107 (134)
T ss_dssp GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH---HC--GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--
T ss_pred CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---cC--cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh--
Confidence 4555554444444445544 2 566788888877654 22 2223479999999999999999999999988853
Q ss_pred HccCcchHHHhHHHHH
Q 026767 120 KCNATNSQCKAYLSAI 135 (233)
Q Consensus 120 ~~~~~~~~a~~~~~lg 135 (233)
.....++..+..+.
T Consensus 108 --eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 108 --ERNNKQVGALKSMV 121 (134)
T ss_dssp --CTTCHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHH
Confidence 44455666554443
No 256
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=91.33 E-value=0.83 Score=35.30 Aligned_cols=94 Identities=6% Similarity=-0.005 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchH
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQ 165 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e 165 (233)
+...-+.-+|.++...++|.+|.+.+.+|...+.+.+ ....-.++.-+..+.+-+|+.+. ...+++.-.
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~-~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~~~~--------- 80 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS-QKNKRMILIYLLPVKMLLGHMPT-VELLKKYHL--------- 80 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHHHHHHTTCEEC-HHHHHHTTC---------
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH-HHHHHHHHHHHHHHHHHcCCCCC-HHHhhhCch---------
Confidence 3445677899999999999999999999998876543 22334456777777788888543 333343211
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 166 NRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 166 ~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
.....|..+++.||...+...+++.
T Consensus 81 -~~y~~L~~Avr~Gdl~~f~~~l~~~ 105 (203)
T 3t5x_A 81 -MQFAEVTRAVSEGNLLLLHEALAKH 105 (203)
T ss_dssp -GGGHHHHHHHHHTCHHHHHHHHHHT
T ss_pred -hHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 1245788899999999999998877
No 257
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.17 E-value=1.5 Score=42.73 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=73.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----------------cCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHH
Q 026767 13 ESAAALAKELHNWREVADFYRKASELYNE-----------------CGRSQPASDALAKAARALE-DAVPEDAIQLYTDA 74 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~~~-----------------~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~A 74 (233)
.-.|.+|...|++++|.++|++|..-... .........-|.++..+++ .+.++.++++.+.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45688999999999999999988542211 1111223456778888898 79999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 026767 75 CIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLR 113 (233)
Q Consensus 75 l~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~ 113 (233)
++.... ++.......+.++=..++.+|+|++|...+..
T Consensus 926 i~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKET-DDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 986443 34433445778888889999999999887643
No 258
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.60 E-value=3.9 Score=30.83 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=49.4
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHH
Q 026767 54 KAARALEDAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLS 133 (233)
Q Consensus 54 ~lg~~~~~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~ 133 (233)
+....++.|+++.|.+..+. .++. ..+..+|...+..|+++-|..+|+++.. +..
T Consensus 11 rF~LAL~lg~l~~A~e~a~~-------l~~~----~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------------~~~ 65 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKK-------LNDS----ITWERLIQEALAQGNASLAEMIYQTQHS--------------FDK 65 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHH-------HCCH----HHHHHHHHHHHHTTCHHHHHHHHHHTTC--------------HHH
T ss_pred HHHHHHhcCCHHHHHHHHHH-------hCCH----HHHHHHHHHHHHcCChHHHHHHHHHhCC--------------HHH
Confidence 34444556777777665433 2332 4788999999999999999999987653 234
Q ss_pred HHHHHHhhCCHHHHHHHHHHh
Q 026767 134 AIIVYLYANDFKQAEKCYNDC 154 (233)
Q Consensus 134 lg~~~~~~gd~~~A~~~~~~a 154 (233)
+..+|...|+.+.-.+.-+.+
T Consensus 66 L~~Ly~~tg~~e~L~kla~iA 86 (177)
T 3mkq_B 66 LSFLYLVTGDVNKLSKMQNIA 86 (177)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHH
Confidence 555566666665555444444
No 259
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=90.53 E-value=1.2 Score=29.67 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH
Q 026767 86 MAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 86 ~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 120 (233)
..+..+...++-+++.|+|++||++.+++.....+
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34455666677777777777777777777654433
No 260
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=89.38 E-value=2.7 Score=40.53 Aligned_cols=98 Identities=9% Similarity=0.052 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHH
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRC 168 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~ 168 (233)
.+++.+-..|++.|+.++|..+|.+......+ |..+. ..+|+.+...+.+.|+.++|.+.|++.... ++ ......
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~k-G~~Pd-vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~-G~--~PDvvT 202 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQK-RKLLT-LDMYNAVMLGWARQGAFKELVYVLFMVKDA-GL--TPDLLS 202 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHH-HTTCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-TC--CCCHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhc-CCCCC-HhHHHHHHHHHHhCCCHHHHHHHHHHHHHc-CC--CCcHHH
Confidence 57999999999999999999999876543221 22233 358999999999999999999999987522 11 112334
Q ss_pred HHHHHHHH-hcCC-HHHHHHHHhhc
Q 026767 169 ATKLISAY-TEGD-VEEIKRVAQSS 191 (233)
Q Consensus 169 l~~L~~a~-~~gd-~~~a~~~~~~~ 191 (233)
.+.|+..+ ..|. .+.|.+.+++-
T Consensus 203 YntLI~glcK~G~~~e~A~~Ll~EM 227 (1134)
T 3spa_A 203 YAAALQCMGRQDQDAGTIERCLEQM 227 (1134)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 45555555 5565 45665555543
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.12 E-value=1.8 Score=28.28 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=12.6
Q ss_pred hCCHHHHHHHHHHHHHHHHh
Q 026767 61 DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~ 80 (233)
.|++++|+.+|.+|++.+..
T Consensus 32 ~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 32 EGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHH
Confidence 46666666666666666554
No 262
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=85.63 E-value=2.8 Score=27.32 Aligned_cols=19 Identities=21% Similarity=0.135 Sum_probs=10.8
Q ss_pred hCCHHHHHHHHHHHHHHHH
Q 026767 61 DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~ 79 (233)
.|++++|+.+|..|++++.
T Consensus 26 ~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 26 ATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp TTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 3555566666666665544
No 263
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=85.57 E-value=2.8 Score=27.94 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=11.1
Q ss_pred hCCHHHHHHHHHHHHHHHHh
Q 026767 61 DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~ 80 (233)
.|++++|+.+|..|+++|..
T Consensus 28 ~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 28 ESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 35555555555555555543
No 264
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=85.40 E-value=1.5 Score=30.66 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=13.9
Q ss_pred hCCHHHHHHHHHHHHHHHHh
Q 026767 61 DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~ 80 (233)
.|+|++|+.+|..|+++|..
T Consensus 31 ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 31 AGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 46777777777777776554
No 265
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.05 E-value=5.8 Score=38.58 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=71.8
Q ss_pred HHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC-----------------ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 026767 53 AKAARALE-DAVPEDAIQLYTDACIMLEEDD-----------------KEQMAFDLYRAATNVYIKLEKYADAATFLLRW 114 (233)
Q Consensus 53 ~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g-----------------~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~a 114 (233)
.-+|.++. .|++++|.++|++|.......+ .......-|..+..++-+.+-++.++++.+.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44688888 7999999999998853322111 11112245778888888999999999999999
Q ss_pred HHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHH
Q 026767 115 GLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYND 153 (233)
Q Consensus 115 l~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~ 153 (233)
+..... ++.......+.++-..++..|+|++|-..+-.
T Consensus 926 i~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKET-DDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 876322 23333444678899999999999999877754
No 266
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=84.52 E-value=7.6 Score=27.04 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNE 41 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~ 41 (233)
....|..+..-|.-.-..|++++|+.+|..|+++|..
T Consensus 14 ~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 4566666666676666777777777777777777654
No 267
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=84.29 E-value=7.6 Score=33.79 Aligned_cols=131 Identities=7% Similarity=-0.069 Sum_probs=81.7
Q ss_pred HHHHHHhh-hCCHHHHHHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-HhHcc---
Q 026767 53 AKAARALE-DAVPEDAIQLYTDACIMLEE-----DDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA-ADKCN--- 122 (233)
Q Consensus 53 ~~lg~~~~-~g~~~~A~~~~~~Al~~~~~-----~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~-~~~~~--- 122 (233)
+++=.+|. .+.+..+-..+ ++++-... .-.....+.-+.-+|.++...++|.+|.+++..|... +....
T Consensus 180 n~L~kiYFkl~~~~lckni~-k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~ 258 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIF-KNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQ 258 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHH-HTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHHHcCCHHHHHHHH-HHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccch
Confidence 34445555 46665554444 33333211 1133455567788999999999999999999999987 65431
Q ss_pred -CcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHHhcCCHHHHHHHHhhc
Q 026767 123 -ATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSS 191 (233)
Q Consensus 123 -~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~~~~~~e~~~l~~L~~a~~~gd~~~a~~~~~~~ 191 (233)
.....-.++.-+..+.+-+|+++.-. .+++.. ...=......|..+++.||...+...+++.
T Consensus 259 ~~~~n~~~ILkyLIpv~LLlG~~P~~~-ll~k~~------~~~L~~~y~~L~~AVr~Gdl~~F~~~L~~~ 321 (455)
T 3t5v_B 259 AITRNGTRILNYMIPTGLILGKMVKWG-PLRPFL------SQETIDNWSVLYKHVRYGNIQGVSLWLRQN 321 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCBCHH-HHGGGS------CHHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCCHH-HHcccc------hHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 12223345566667777778764332 233311 011122356788899999999999999887
No 268
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=84.24 E-value=3.3 Score=26.98 Aligned_cols=20 Identities=35% Similarity=0.483 Sum_probs=13.1
Q ss_pred hCCHHHHHHHHHHHHHHHHh
Q 026767 61 DAVPEDAIQLYTDACIMLEE 80 (233)
Q Consensus 61 ~g~~~~A~~~~~~Al~~~~~ 80 (233)
.|++++|+.+|.+|++.|..
T Consensus 24 ~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 24 EGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp TTCHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHH
Confidence 46666777777777666554
No 269
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=83.95 E-value=1.7 Score=28.39 Aligned_cols=21 Identities=14% Similarity=-0.129 Sum_probs=14.2
Q ss_pred HhccHHHHHHHHHHHHHHHhH
Q 026767 100 KLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~ 120 (233)
+.|+|.+|+.+|.++++.+..
T Consensus 31 ~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 31 KEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHH
Confidence 466777777777777766554
No 270
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=83.59 E-value=15 Score=31.12 Aligned_cols=102 Identities=17% Similarity=0.181 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h--CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 24 NWREVADFYRKASELYNECGRSQPASDALAKAARALE-D--AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 24 ~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~--g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
|.-|-..+-++-+=+.-..|....--.++.|+|.+-+ . .....++..|.+|+...+..=..... .-+.-+|..+.+
T Consensus 230 Ds~El~~LQq~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv-YPYtylgGy~yR 308 (472)
T 3re2_A 230 DSIQLSQLQQELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI-YPYTYLGGYYYR 308 (472)
T ss_dssp ECHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS-HHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc-cchhhhhhhhhh
Confidence 3446667778888888899998888889999999877 3 33344899999999887764322222 467778889999
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcch
Q 026767 101 LEKYADAATFLLRWGLAADKCNATNS 126 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~~ 126 (233)
.++|.+|+.++-.+....+.-+-.+.
T Consensus 309 ~~~~reAl~~WA~Aa~Vi~~YNY~re 334 (472)
T 3re2_A 309 KKKYYEAIASWVDAGYVAGKYNYSKD 334 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCCCGG
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999999988776554433
No 271
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=83.20 E-value=18 Score=31.17 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h---CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 25 WREVADFYRKASELYNECGRSQPASDALAKAARALE-D---AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 25 ~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~---g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
--|-..+-++-+=+.-..|....--.++.|+|.+-+ . |++ .++..|.+|+...+..=..... .-+.-+|-.+++
T Consensus 253 s~el~~LQq~LLWlLyd~GhL~rYPmALgnLgDLEe~~pt~gr~-~~~~L~~~AI~sa~~~Y~n~Hv-YPYtYlgGy~yR 330 (550)
T 3u84_A 253 SLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRP-DPLTLYHKGIASAKTYYRDEHI-YPYMYLAGYHCR 330 (550)
T ss_dssp CHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTCC-CHHHHHHHHHHHHHHHSTTCCS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccchhhCchhhcchhhHhhcCCCCCCC-CHHHHHHHHHHHHHHHhccCCc-cceeecchhhhh
Confidence 345666668888888889998888889999999876 3 443 4889999999887764322222 467788999999
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcchHHHhH
Q 026767 101 LEKYADAATFLLRWGLAADKCNATNSQCKAY 131 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~ 131 (233)
.++|.+|+.++-.+..+.+.-+..+.--..|
T Consensus 331 ~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIY 361 (550)
T 3u84_A 331 NRNVREALQAWADTATVIQDYNYCREDEEIY 361 (550)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCCCGGGHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCcchHHHH
Confidence 9999999999999998887665444333333
No 272
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=83.01 E-value=3.2 Score=27.24 Aligned_cols=18 Identities=17% Similarity=0.163 Sum_probs=9.3
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~ 79 (233)
|++++|+.+|..|++++.
T Consensus 30 g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 30 SRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp TCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 455555555555555444
No 273
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=83.00 E-value=2.6 Score=27.48 Aligned_cols=21 Identities=14% Similarity=-0.146 Sum_probs=13.8
Q ss_pred HhccHHHHHHHHHHHHHHHhH
Q 026767 100 KLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~ 120 (233)
..|+|.+|+.+|..+++.+..
T Consensus 25 ~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHH
Confidence 356777777777777766554
No 274
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=82.55 E-value=2.8 Score=27.57 Aligned_cols=21 Identities=10% Similarity=-0.140 Sum_probs=15.9
Q ss_pred HhccHHHHHHHHHHHHHHHhH
Q 026767 100 KLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~ 120 (233)
..|+|.+|+.+|..+++.+..
T Consensus 28 ~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 28 SESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHH
Confidence 467888888888888877664
No 275
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=82.22 E-value=2.8 Score=27.28 Aligned_cols=21 Identities=24% Similarity=0.101 Sum_probs=14.9
Q ss_pred HhccHHHHHHHHHHHHHHHhH
Q 026767 100 KLEKYADAATFLLRWGLAADK 120 (233)
Q Consensus 100 ~~g~~~~A~~~~~~al~~~~~ 120 (233)
+.|+|.+|+.+|.++++.+..
T Consensus 23 ~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 23 KEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHH
Confidence 467777777777777776654
No 276
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=81.23 E-value=14 Score=31.79 Aligned_cols=110 Identities=16% Similarity=0.186 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----cCCchHHHHHHHHHHHHh------------hhC--CHHHHHHH
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNE----CGRSQPASDALAKAARAL------------EDA--VPEDAIQL 70 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~----~g~~~~~a~~l~~lg~~~------------~~g--~~~~A~~~ 70 (233)
-..+.+++..+...+++.||.-++-.++.+.-+ .|...--...+.++.--+ ... .-+.-.+.
T Consensus 11 ~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~l 90 (428)
T 2wm9_A 11 KTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMEL 90 (428)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHH
Confidence 456788888888888888888888755544322 111000000000000000 000 11222345
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 71 YTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 71 ~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
+++|+++|...+....+..++..+...|-...+|.+-..++.+...++
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~a~~y 138 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAY 138 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 666666666666555555556666666655556655555554444433
No 277
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.02 E-value=24 Score=29.79 Aligned_cols=182 Identities=12% Similarity=0.090 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC-----------ChHHHHHHHHHHHH
Q 026767 29 ADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD-----------KEQMAFDLYRAATN 96 (233)
Q Consensus 29 ~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g-----------~~~~~~~~l~~lg~ 96 (233)
++.|+.-+.-|...=++...+.. +..+.. ..++++|+++.++......... .......+...++.
T Consensus 59 ~~ly~~fi~~f~~kin~L~lv~~---~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~ 135 (393)
T 4b4t_O 59 LRLYDNFVSKFYDKINQLSVVKY---LLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIAR 135 (393)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHT---THHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHH---HHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHH
Confidence 45555555555544444333222 122334 4789999999887654433211 11223356778899
Q ss_pred HHHHhccHHHHHHHHHHHHHHHhHccCc--chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcCCC---CCCchH--HHHH
Q 026767 97 VYIKLEKYADAATFLLRWGLAADKCNAT--NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDA---FLRSDQ--NRCA 169 (233)
Q Consensus 97 ~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~~~---~~~~~e--~~~l 169 (233)
.|...++.++|..+++++-......++. ...+..|...+..|...+++..+...+-.++.... .....+ ..+.
T Consensus 136 ~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~~~~~~~~~~~~a~ 215 (393)
T 4b4t_O 136 TYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAY 215 (393)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSSCSHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccccCCHHHHHHHHH
Confidence 9999999999999999999887776543 34566677888888999999998888877763211 112222 2233
Q ss_pred HHHHHHHhcCCHHHHHHHHhhcccccc-----hHHHHHHhccCCCCchh
Q 026767 170 TKLISAYTEGDVEEIKRVAQSSAISNL-----DHVIIKLARKLPTGDVS 213 (233)
Q Consensus 170 ~~L~~a~~~gd~~~a~~~~~~~~~~~l-----d~~~~~l~~~l~~~~~~ 213 (233)
.-+..++...+.--+.+.+..+.+..| ..|...|..-...|++.
T Consensus 216 ~l~~~all~~~i~~f~eLL~~p~i~~L~~~~~~~~l~~Ll~~f~~g~~~ 264 (393)
T 4b4t_O 216 DLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFD 264 (393)
T ss_dssp HHHHHHHHCCSSCSTHHHHHSCCTTSSCSSSSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHcCCCCCChHHHhCChHHHHhhcCCchHHHHHHHHHHhcCCHH
Confidence 333344444445555666666644444 13566666655556555
No 278
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=78.94 E-value=18 Score=31.03 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-h--CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 24 NWREVADFYRKASELYNECGRSQPASDALAKAARALE-D--AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 24 ~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~--g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
+-.|-...-++-+-+.-..|....--.++.++|.+-+ . ...+.++..|.+|+...+..-.... ...+.-+|-.+.+
T Consensus 237 Ds~el~~lQq~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h-vYPYtYlgG~~~R 315 (489)
T 4gq4_A 237 DSLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH-IYPYMYLAGYHCR 315 (489)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC-SHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc-ccceeecchHHHH
Confidence 3456667777788888888888888888999998877 3 2224578899999998876542222 2478888999999
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcc
Q 026767 101 LEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
.++|.+|+.++-.+....+.-+-.+
T Consensus 316 ~~~~~eAl~~wa~aa~Vi~~YnY~r 340 (489)
T 4gq4_A 316 NRNVREALQAWADTATVIQDYNYCR 340 (489)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCCCT
T ss_pred hhhHHHHHHHhhhhhhhhhhccccc
Confidence 9999999999999988877654433
No 279
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=77.24 E-value=8.3 Score=35.82 Aligned_cols=52 Identities=17% Similarity=0.128 Sum_probs=43.6
Q ss_pred HHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 026767 56 ARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLR 113 (233)
Q Consensus 56 g~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~ 113 (233)
+..+. .|+|+-|++..++|+.+.+.. ..++..|+.+|+.+|+|+.|+-.+.-
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~aPse------F~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELALDS------FESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSC------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhccCcHHHHHHHHHHHHhcCchh------hHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 44445 699999999999999988753 46899999999999999999976553
No 280
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=75.70 E-value=20 Score=25.90 Aligned_cols=79 Identities=18% Similarity=0.061 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhh-h---CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccC
Q 026767 48 ASDALAKAARALE-D---AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNA 123 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~---g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 123 (233)
...+..+.|..+. . .+..+++..++..+. .... ..-.|+..++.-+.++|+|++|..+.+..+++ ..
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~---~~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~----eP 108 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK---EAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH----ER 108 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH---HCCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT----CC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---cCcc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc----CC
Confidence 3444555555544 2 556678888887655 3222 12369999999999999999999999988854 44
Q ss_pred cchHHHhHHHHH
Q 026767 124 TNSQCKAYLSAI 135 (233)
Q Consensus 124 ~~~~a~~~~~lg 135 (233)
.+.++..+..+.
T Consensus 109 ~n~QA~~Lk~~I 120 (144)
T 1y8m_A 109 NNKQVGALKSMV 120 (144)
T ss_dssp CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 455666554443
No 281
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=75.36 E-value=24 Score=29.83 Aligned_cols=37 Identities=8% Similarity=0.187 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKEL------HNWREVADFYRKASELYNE 41 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~------g~~~eA~~~~~~A~~l~~~ 41 (233)
.+..+.++.|+|.+|.+. ...+.|..+|++|.-+|.-
T Consensus 119 ~fE~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~ 161 (392)
T 1zb1_A 119 AFEKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEY 161 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 467778888888777532 2578999999999998864
No 282
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.60 E-value=5.5 Score=27.71 Aligned_cols=18 Identities=22% Similarity=0.174 Sum_probs=10.3
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~ 79 (233)
|+.++|+++|++.+..+.
T Consensus 36 g~k~~Al~lYk~GI~eLe 53 (116)
T 2dl1_A 36 GQKEEAKNYYKQGIGHLL 53 (116)
T ss_dssp TCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 555666666665555444
No 283
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=71.79 E-value=19 Score=23.80 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=29.6
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026767 4 SPWDAAKHMESAAALAKELHNWREVADFYRKASELYNE 41 (233)
Q Consensus 4 ~~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~ 41 (233)
.....|..+..-|.-+-..|++++|+.+|..|++++..
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 45666777777787888888888888888888888764
No 284
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=71.50 E-value=44 Score=28.03 Aligned_cols=36 Identities=11% Similarity=0.084 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELH------------NWREVADFYRKASELYN 40 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g------------~~~eA~~~~~~A~~l~~ 40 (233)
.+..+.++.|+|.+|.+.+ ..+.|..+|++|.-+|.
T Consensus 110 ~fE~a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~ 157 (376)
T 3r9m_A 110 VFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFK 157 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHH
Confidence 5677888888888876532 25788899999998875
No 285
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=69.17 E-value=34 Score=29.32 Aligned_cols=116 Identities=13% Similarity=0.085 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH----hh-hCCHHHHHHHHHHHHH-------HHHhcC------Ch
Q 026767 23 HNWREVADFYRKASELYNECGRSQPASDALAKAARA----LE-DAVPEDAIQLYTDACI-------MLEEDD------KE 84 (233)
Q Consensus 23 g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~----~~-~g~~~~A~~~~~~Al~-------~~~~~g------~~ 84 (233)
+.++-=+.|+.+-.+.+.+.|+...+|.|+..++.+ +. .+.+.--...+..... +-+..| ..
T Consensus 5 ~~pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte 84 (428)
T 2wm9_A 5 STPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNE 84 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCH
Confidence 445555678888888899999999999998755432 22 1211000000000000 000000 22
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHH
Q 026767 85 QMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVY 138 (233)
Q Consensus 85 ~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~ 138 (233)
.+....+......+.+-+.|+.|+.+|+..+..++...+....+.++..+..+|
T Consensus 85 ~~l~~ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~a~~y 138 (428)
T 2wm9_A 85 DVLMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAY 138 (428)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 333346677778888888999999999999988887644444444444444443
No 286
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.11 E-value=46 Score=31.66 Aligned_cols=24 Identities=8% Similarity=0.008 Sum_probs=20.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 026767 14 SAAALAKELHNWREVADFYRKASE 37 (233)
Q Consensus 14 ~~g~~~~~~g~~~eA~~~~~~A~~ 37 (233)
-.|.+|...|++++|.++|++|..
T Consensus 845 v~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 845 LKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhh
Confidence 478888899999999999998863
No 287
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=67.40 E-value=60 Score=27.89 Aligned_cols=32 Identities=16% Similarity=0.036 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026767 8 AAKHMESAAALAKELHNWREVADFYRKASELY 39 (233)
Q Consensus 8 ~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~ 39 (233)
-.+.+..++..+...++|.||.-++.....++
T Consensus 34 ~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~ 65 (436)
T 2yin_A 34 YIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLL 65 (436)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHh
Confidence 34567888999999999999999886655554
No 288
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=66.95 E-value=39 Score=25.57 Aligned_cols=90 Identities=10% Similarity=-0.126 Sum_probs=58.0
Q ss_pred HHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH------------c
Q 026767 55 AARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK------------C 121 (233)
Q Consensus 55 lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~------------~ 121 (233)
++.++. .|+|..++-+ .-..+.. .+..--..+|-++.+|.+|+..++..++---+ .
T Consensus 39 ~~I~LyyngEY~R~Lf~-------L~~lNT~----Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFH-------LHKLNTC----TSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMF 107 (242)
T ss_dssp HHHHHHHTTCHHHHHHH-------HHTCCBH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTS
T ss_pred hhhhhhhcchHhHHHHH-------HHhcchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceee
Confidence 455555 7886555443 3333322 13334456778899999999999988732111 0
Q ss_pred cCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 122 NATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 122 ~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
-++-..-.-+..+|.++...|+-++|+.+|.++.
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 1122334456888999999999999999998875
No 289
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.26 E-value=43 Score=31.88 Aligned_cols=85 Identities=11% Similarity=0.001 Sum_probs=56.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHH-----------------hHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHh
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAA-----------------DKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDC 154 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~-----------------~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~a 154 (233)
.-+|.+|+..|++++|..+|++|..-. ...........-|..+..++-..+-++-+.+..+.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 568999999999999999999875211 111122223345678888888888888888888888
Q ss_pred hcCCCC-CCchHHHHHHHHHHHH
Q 026767 155 SQVDAF-LRSDQNRCATKLISAY 176 (233)
Q Consensus 155 l~~~~~-~~~~e~~~l~~L~~a~ 176 (233)
++...- +..-+..+...+.++.
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a 946 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTA 946 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHH
T ss_pred HhhcccCCccchHHHHHHHHHHH
Confidence 854332 2233445556665543
No 290
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=65.11 E-value=11 Score=25.01 Aligned_cols=59 Identities=12% Similarity=-0.023 Sum_probs=39.4
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 95 TNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 95 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
|..+...|+|-+|-+.++..=.-.........++-+....|..+...|+. |...+.+++
T Consensus 8 ~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~ 66 (94)
T 2cwy_A 8 VLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAE 66 (94)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHH
Confidence 34455568888888888866543321112223455557788888888988 888898886
No 291
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.23 E-value=12 Score=27.55 Aligned_cols=62 Identities=2% Similarity=-0.131 Sum_probs=41.9
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhHc--cCcchHHHhH-HHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 94 ATNVYIKLEKYADAATFLLRWGLAADKC--NATNSQCKAY-LSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~-~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
-+..+...|+|-+|-+.++..=.-.... .....++-+. ...+..++..|+...|...+.+++
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3444555688889988888554221111 1123345555 677888999999999999999997
No 292
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=62.75 E-value=8.8 Score=24.69 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=21.1
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
.++|+=|...|+|+.|+.+|+.++...
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 456777778899999999998887644
No 293
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.10 E-value=16 Score=23.10 Aligned_cols=24 Identities=8% Similarity=0.037 Sum_probs=11.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHH
Q 026767 15 AAALAKELHNWREVADFYRKASEL 38 (233)
Q Consensus 15 ~g~~~~~~g~~~eA~~~~~~A~~l 38 (233)
+|..+...|++++|+.+|-+|+..
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344444444444444444444443
No 294
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=61.54 E-value=7.4 Score=24.70 Aligned_cols=27 Identities=7% Similarity=-0.026 Sum_probs=22.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
..+|+.++..|++++|+.+|-+|+.+|
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 467888888999999999998888765
No 295
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=60.44 E-value=12 Score=24.98 Aligned_cols=27 Identities=7% Similarity=-0.026 Sum_probs=22.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
..+|+.++..|+++.|+.+|-+|+.+|
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 467888888999999999888888765
No 296
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=57.02 E-value=27 Score=23.27 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=11.7
Q ss_pred HHHHhh-hCCHHHHHHHHHHHHHHHH
Q 026767 55 AARALE-DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 55 lg~~~~-~g~~~~A~~~~~~Al~~~~ 79 (233)
+|..+. +|+++.|+.||-+|+.++.
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 344444 4445555555544544444
No 297
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=49.44 E-value=1.5e+02 Score=26.71 Aligned_cols=119 Identities=9% Similarity=0.036 Sum_probs=72.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK 100 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~ 100 (233)
..+.+.|...+.+...-. .-+..........++.-+. .+...++..++.++. ....+... .. ..++ ..++
T Consensus 227 r~d~~~A~~~~~~~~~~~--~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~e--~~~r-~Alr 297 (618)
T 1qsa_A 227 RQDAENARLMIPSLAQAQ--QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAI---MRSQSTSL-IE--RRVR-MALG 297 (618)
T ss_dssp HHCHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHH---HTCCCHHH-HH--HHHH-HHHH
T ss_pred hcCHHHHHHHHHhhhhcc--CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc---ccCCChHH-HH--HHHH-HHHH
Confidence 446777777776554421 1123333344445554444 353667777777643 23333322 12 2233 3456
Q ss_pred hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 101 LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 101 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
.|++..|..+|.+.-. ......+..+=+|.++..+|+..+|...|+++.
T Consensus 298 ~~d~~~a~~~~~~l~~------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 298 TGDRRGLNTWLARLPM------EAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp HTCHHHHHHHHHHSCT------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccc------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 7999999998875432 222456667888999999999999999998875
No 298
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=49.40 E-value=1e+02 Score=24.75 Aligned_cols=116 Identities=15% Similarity=0.112 Sum_probs=71.7
Q ss_pred HHHhhhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHH
Q 026767 56 ARALEDAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAI 135 (233)
Q Consensus 56 g~~~~~g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg 135 (233)
...+..|.+++|++.....+.-.+.. +.....+-.+++-.|++++|..-++-+..+.. .....+..|..+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~d------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p---~~~~~a~~yr~l- 74 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKD------ASLRSSFIELLCIDGDFERADEQLMQSIKLFP---EYLPGASQLRHL- 74 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG---GGHHHHHHHHHH-
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc---hhhHHHHHHHHH-
Confidence 34455799999999888877654432 24556678889999999999999998886632 122222233332
Q ss_pred HHHHhhCCHHHHHHHHHHhh---cCCCCCCchHHHHHHHHHHHH---hcCCHHHHHHHHhhc
Q 026767 136 IVYLYANDFKQAEKCYNDCS---QVDAFLRSDQNRCATKLISAY---TEGDVEEIKRVAQSS 191 (233)
Q Consensus 136 ~~~~~~gd~~~A~~~~~~al---~~~~~~~~~e~~~l~~L~~a~---~~gd~~~a~~~~~~~ 191 (233)
..|+..-++.. ..+.+.... ...+..|.++. ..||.++|.+...++
T Consensus 75 ---------I~aE~~R~~vfaG~~~P~~~g~~-~~w~~~ll~Al~~~~~G~~~~A~~lr~~A 126 (273)
T 1zbp_A 75 ---------VKAAQARKDFAQGAATAKVLGEN-EELTKSLVSFNLSMVSQDYEQVSELALQI 126 (273)
T ss_dssp ---------HHHHHHHHHHTTSCCCEECCCSC-HHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 23333334444 344442211 12444455544 589999999888777
No 299
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.34 E-value=47 Score=22.99 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHH
Q 026767 24 NWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 24 ~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~~g~~~~A~~~~~~Al~~~~ 79 (233)
.+++|-.+..+|+.+-+ .|+...+... |.+.|.++++++.+-.
T Consensus 18 ~h~~AF~~Is~AL~~DE-~g~k~~Al~l------------Yk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDE-LGQKEEAKNY------------YKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHH-HTCHHHHHHH------------HHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhh-cCCHHHHHHH------------HHHHHHHHHHhccccc
Confidence 35566666666666655 3555433322 3345555555555544
No 300
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=49.02 E-value=33 Score=24.44 Aligned_cols=43 Identities=9% Similarity=-0.115 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAA 118 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (233)
++.+++..|+++|..-+.. +......|+|+.|.-..+++++.+
T Consensus 4 ~~~ee~~~wl~~A~~dl~~--------------A~~~~~~g~y~~a~F~aqQA~Ek~ 46 (141)
T 3o10_A 4 GNPVEARRWLRQARANFSA--------------ARNDLHKNANEWVCFKCYLSTKLA 46 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHH--------------HGGGTTTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhhhH--------------HhhHHhhCccceEeeehhHHHHHH
Confidence 5778888888888755543 333445677777777777766544
No 301
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=48.41 E-value=17 Score=23.81 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=24.2
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHh
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDC 154 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~a 154 (233)
...+..|++=+.-++..||+..|..++.=+
T Consensus 32 l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 32 MRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345677888889999999999999887654
No 302
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=48.34 E-value=1.2e+02 Score=25.26 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELH---------NWREVADFYRKASELYNE 41 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g---------~~~eA~~~~~~A~~l~~~ 41 (233)
.+..+.++.|+|.+|.+.+ ..+.|..+|++|.-+|.-
T Consensus 113 ~fE~a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~ 158 (363)
T 3rau_A 113 KYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAY 158 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHH
Confidence 5778889999999886543 256888999999988863
No 303
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=45.18 E-value=1.8e+02 Score=26.47 Aligned_cols=95 Identities=12% Similarity=0.084 Sum_probs=50.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCchHHHHHHHH-HHHHhh-h--CCH---------HHHHHHHHHHHHHH
Q 026767 12 MESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAK-AARALE-D--AVP---------EDAIQLYTDACIML 78 (233)
Q Consensus 12 ~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~-lg~~~~-~--g~~---------~~A~~~~~~Al~~~ 78 (233)
...+|.-+...|++++|+.+|.- .|++..+...+++ ++.+.. . ++. +.=+....+-.+.|
T Consensus 446 ~~~aA~~ae~~G~~~dAi~LY~L-------a~~~d~vl~lln~~Ls~~l~~~~~~~~~~~~~~~~~~~l~~la~~i~~~y 518 (661)
T 2qx5_A 446 TEQAARRADEDGRIYDSILLYQL-------AEEYDIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIY 518 (661)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH-------TTCHHHHHHHHHHHHHHHHHHSCTTSCSSCSSCCTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHH
Confidence 35566667777777777765544 4566555555543 344443 1 110 11223333444444
Q ss_pred HhcC--------ChHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Q 026767 79 EEDD--------KEQMAFDLYRAATNVY--IKLEKYADAATFLLR 113 (233)
Q Consensus 79 ~~~g--------~~~~~~~~l~~lg~~~--~~~g~~~~A~~~~~~ 113 (233)
...+ ..+.....|.++..++ ...|+|..|++.+++
T Consensus 519 ~~~~~~~~~~~~~~~~t~~lLl~l~~f~~~~~~g~~~~AL~~i~~ 563 (661)
T 2qx5_A 519 FDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMEL 563 (661)
T ss_dssp TTCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcCchhhhhccHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 4321 1233445666666666 677788888777665
No 304
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=45.01 E-value=23 Score=23.34 Aligned_cols=17 Identities=24% Similarity=0.325 Sum_probs=8.4
Q ss_pred CCHHHHHHHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACIML 78 (233)
Q Consensus 62 g~~~~A~~~~~~Al~~~ 78 (233)
|+.++|+++|++.+.-.
T Consensus 33 G~k~~A~~~YkkGi~eL 49 (89)
T 3eab_A 33 GQKEQAVEWYKKGIEEL 49 (89)
T ss_dssp SSGGGSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 44445555555555433
No 305
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=44.37 E-value=1e+02 Score=23.33 Aligned_cols=99 Identities=21% Similarity=0.173 Sum_probs=66.0
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh--cCC----------C-C
Q 026767 94 ATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS--QVD----------A-F 160 (233)
Q Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al--~~~----------~-~ 160 (233)
++.++.-.|+|.+++-++.. . ..+.+..--.+|+-...||..|+..++..+ .+. . |
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~-------l----NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHK-------L----NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMF 107 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-------C----CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTS
T ss_pred hhhhhhhcchHhHHHHHHHh-------c----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceee
Confidence 56667778999888765542 1 112234445688999999999999999988 222 1 2
Q ss_pred CCc-hHHHHHHHHHHHH-hcCCHHHHHHHHhhc-ccccchHHHHHH
Q 026767 161 LRS-DQNRCATKLISAY-TEGDVEEIKRVAQSS-AISNLDHVIIKL 203 (233)
Q Consensus 161 ~~~-~e~~~l~~L~~a~-~~gd~~~a~~~~~~~-~~~~ld~~~~~l 203 (233)
.+. .+--+-..++..+ ..|+-+++..+...+ -...|=+++..|
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnl 153 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENL 153 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHH
Confidence 233 3334555666677 799999999998877 555555555533
No 306
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=44.04 E-value=65 Score=21.02 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=22.2
Q ss_pred HHHhHHHHHHHHHhhCCHHHHHHHHHHh
Q 026767 127 QCKAYLSAIIVYLYANDFKQAEKCYNDC 154 (233)
Q Consensus 127 ~a~~~~~lg~~~~~~gd~~~A~~~~~~a 154 (233)
.+..|++=|.-++..||+..|..++.=+
T Consensus 38 mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 38 RALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4567777788899999999998887644
No 307
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=43.95 E-value=2.2e+02 Score=27.20 Aligned_cols=140 Identities=9% Similarity=-0.029 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHh-c
Q 026767 5 PWDAAKHMESAAALAKELHNWREVADFYRKASELYNE-CGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEE-D 81 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~-~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~-~ 81 (233)
.|+...+...+|.++. |+.++++....+-+. .. .++..-.+-++.-+|.++. .++ +++.++..-+.--.. .
T Consensus 372 ~~~k~sA~aSLGlIh~--g~~~~gl~~L~~yL~--~~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~ 445 (963)
T 4ady_A 372 NWAKFTATASLGVIHK--GNLLEGKKVMAPYLP--GSRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTS 445 (963)
T ss_dssp THHHHHHHHHHHHHTS--SCTTTHHHHHTTTST--TSCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCC
T ss_pred hHHHHHHHHHhhhhcc--CchHHHHHHHHHhcc--ccCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccc
Confidence 3455667777888884 777777776655322 11 3556667778888898888 553 567666665533210 0
Q ss_pred CC---hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 82 DK---EQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 82 g~---~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
|+ ......+-..+|.++...++ +++.+.+...+. ... ......+-+.+|.++.-.|+.......+.-+.
T Consensus 446 ~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~---dd~-~~~~~~AalALGli~vGTgn~~ai~~LL~~~~ 517 (963)
T 4ady_A 446 GDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLY---NDS-ATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQ 517 (963)
T ss_dssp SCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHH---TCC-HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHh---cCC-HHHHHHHHHHHhhhhcccCCHHHHHHHHHHHh
Confidence 11 11111234488888877765 355665555543 111 11112345788999888888755555554443
No 308
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=43.58 E-value=1.7e+02 Score=25.70 Aligned_cols=15 Identities=20% Similarity=0.197 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHH
Q 026767 27 EVADFYRKASELYNE 41 (233)
Q Consensus 27 eA~~~~~~A~~l~~~ 41 (233)
+|+++|++|+..+.+
T Consensus 450 kAi~~Y~~Ai~~L~k 464 (526)
T 2wb7_A 450 GAIDEYKAAINDLQK 464 (526)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444444444433
No 309
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=43.47 E-value=30 Score=22.12 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=18.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026767 13 ESAAALAKELHNWREVADFYRKASELY 39 (233)
Q Consensus 13 ~~~g~~~~~~g~~~eA~~~~~~A~~l~ 39 (233)
...|.=|...|+|+.|+.||+.++...
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 344555566778888888887776654
No 310
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=40.57 E-value=1.3e+02 Score=23.48 Aligned_cols=53 Identities=13% Similarity=-0.079 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEE-DD--KEQMAFDLYRAATNVYIK-LEKYADAATFLLRWGLAA 118 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~-~g--~~~~~~~~l~~lg~~~~~-~g~~~~A~~~~~~al~~~ 118 (233)
+.|.+.|++|.++... .. ++.-.+.+ .|.+.+|.. +++.++|+...+++..-.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLa-LN~SVF~yEil~~~~~A~~lAk~afd~A 203 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLA-LNFSVFYYEILNSPDRACRLAKAAFDDA 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHH-HHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4677778888887753 22 34344433 344444444 678888887777766543
No 311
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=40.49 E-value=1.1e+02 Score=24.31 Aligned_cols=52 Identities=15% Similarity=0.017 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEEDD--KEQMAFDLYRAATNVYIK-LEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~g--~~~~~~~~l~~lg~~~~~-~g~~~~A~~~~~~al~~ 117 (233)
+.|.+.|++|.++..... ++.-.+.+ .|.+.+|.+ +++.++|+.+.+++..-
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLa-LNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLA-LNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHH-HHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356677777777772222 33334333 344444443 67777777777766653
No 312
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=40.21 E-value=1.8e+02 Score=25.06 Aligned_cols=88 Identities=10% Similarity=-0.013 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCH
Q 026767 67 AIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIK--LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDF 144 (233)
Q Consensus 67 A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~--~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~ 144 (233)
-...-++-+-+.-+.|....--.++.++|++--- ....+.++++|++|+...+..-.. ....-|..+|-.+.+.++|
T Consensus 241 l~~lQq~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~-~hvYPYtYlgG~~~R~~~~ 319 (489)
T 4gq4_A 241 LLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRD-EHIYPYMYLAGYHCRNRNV 319 (489)
T ss_dssp HHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTT-CCSHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhccc-CcccceeecchHHHHhhhH
Confidence 3333444444444444322222355566655432 112235778999999887754222 2234568888999999999
Q ss_pred HHHHHHHHHhh
Q 026767 145 KQAEKCYNDCS 155 (233)
Q Consensus 145 ~~A~~~~~~al 155 (233)
.+|.+++.++-
T Consensus 320 ~eAl~~wa~aa 330 (489)
T 4gq4_A 320 REALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhhh
Confidence 99999999886
No 313
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=39.73 E-value=2.2e+02 Score=25.96 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELHN---------WREVADFYRKASELYNE 41 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~---------~~eA~~~~~~A~~l~~~ 41 (233)
.|..+.++.|+|.+|.+.+. ...|..+|++|.-+|.-
T Consensus 123 ~fE~a~vLfNlaal~s~~A~~~~r~~~~~lK~A~~~fq~AAG~f~~ 168 (704)
T 2xs1_A 123 GYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLH 168 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH
Confidence 56788889999988864221 57888999999988763
No 314
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=39.71 E-value=59 Score=28.15 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=52.3
Q ss_pred ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhH----ccCcc-hHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 83 KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADK----CNATN-SQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 83 ~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~----~~~~~-~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+.++.....+++-.+|.++++..-+-..+. +++-... ...+. ..+.-++-+|.+++..++|.+|.+++..|...
T Consensus 171 kk~~~l~l~n~L~kiYFkl~~~~lckni~k-~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 171 KQRILLYLVNKLNNIYFRIESPQLCSNIFK-NFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTHHHHHH-THHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHcCCHHHHHHHHH-HhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 345555667788889999999988888775 4433211 01122 23344599999999999999999999999843
No 315
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=39.10 E-value=1.1e+02 Score=22.34 Aligned_cols=31 Identities=6% Similarity=-0.127 Sum_probs=23.9
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhHcc
Q 026767 92 RAATNVYIKLEKYADAATFLLRWGLAADKCN 122 (233)
Q Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 122 (233)
...|..+.+.|+...|..++.+++.......
T Consensus 79 lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~ 109 (161)
T 2ijq_A 79 AAGAYKHFDFEDDDGMRSLFRTSLQYFRGVP 109 (161)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 4566677788999999999999988765543
No 316
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=39.03 E-value=1.1e+02 Score=23.92 Aligned_cols=53 Identities=19% Similarity=0.033 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHH-cC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNE-CG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIML 78 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~-~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~ 78 (233)
+.|...|++|.++... .. +|-..+.+++-.-..|+ .+++++|++..++|.+-.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~A 203 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5788899999998864 22 34445555555555566 699999998888876543
No 317
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=37.50 E-value=69 Score=22.99 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=21.5
Q ss_pred HHHHHHHHHhh-hCCHHHHHHHHHHHHHHHH
Q 026767 50 DALAKAARALE-DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 50 ~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~ 79 (233)
..+.+.|.+|. .|+++.|.-.|.+.+.++.
T Consensus 41 ~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 41 VEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33444567777 6888888888888877775
No 318
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=37.14 E-value=1.6e+02 Score=23.43 Aligned_cols=51 Identities=12% Similarity=-0.069 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEE-DD--KEQMAFDLYRAATNVYIK-LEKYADAATFLLRWGL 116 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~-~g--~~~~~~~~l~~lg~~~~~-~g~~~~A~~~~~~al~ 116 (233)
+.|...|++|.++... .. ++.-.+.++ |.+.+|.. +++.++|+.+.+++..
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaL-NfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLAL-NFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4677778888887753 22 344444333 44444444 6788888877777664
No 319
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.96 E-value=62 Score=23.23 Aligned_cols=31 Identities=6% Similarity=-0.096 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAAD 119 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~ 119 (233)
..+...|.+|...|+++.|.-+|-+...++.
T Consensus 41 ~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 41 VEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3455668888999999999999999988885
No 320
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=35.99 E-value=1.3e+02 Score=23.95 Aligned_cols=52 Identities=15% Similarity=0.170 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHH-c----CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNE-C----GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIM 77 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~-~----g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~ 77 (233)
+.|...|++|.++... . =+|-..+.+|+-.-..|+ .+++++|++..++|.+-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5677888888887743 3 234444445554444455 68888888888887665
No 321
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=35.45 E-value=2e+02 Score=24.08 Aligned_cols=50 Identities=4% Similarity=-0.130 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhHccCc------------------chHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 106 DAATFLLRWGLAADKCNAT------------------NSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 106 ~A~~~~~~al~~~~~~~~~------------------~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
++.++|+++.......+.. ...+.+++..|......+++.+|+.+++.+.
T Consensus 217 ~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~ 284 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSM 284 (392)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 4556777777766554310 1233344445666666677777777776664
No 322
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=34.89 E-value=1.6e+02 Score=22.96 Aligned_cols=51 Identities=22% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHH-HcC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYN-ECG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~-~~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
+.|...|++|.++.. ... +|-.-+.+|+-.-..|+ .+++++|++..++|.+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
No 323
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=33.96 E-value=1.4e+02 Score=23.68 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHH-cC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNE-CG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIM 77 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~-~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~ 77 (233)
+.|...|++|.++... .. +|-..+.+|+-.-..|+ .+++++|+...++|.+-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4788899999998863 22 34455555555555566 69999999888877643
No 324
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=33.88 E-value=2.4e+02 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.292 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 026767 65 EDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~g 82 (233)
.+|+++|++|++..+...
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 456666666666666544
No 325
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=33.09 E-value=1e+02 Score=20.17 Aligned_cols=32 Identities=13% Similarity=-0.083 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHcc
Q 026767 89 DLYRAATNVYIKLEKYADAATFLLRWGLAADKCN 122 (233)
Q Consensus 89 ~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 122 (233)
.+....|..+.+.|+. |...+.+++......+
T Consensus 42 LIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~ 73 (94)
T 2cwy_A 42 VILLAAALHQRRLGRP--GLRNLRKAEARLEGLP 73 (94)
T ss_dssp HHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCC
Confidence 3444555666667777 8888888877665544
No 326
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=33.01 E-value=2.2e+02 Score=24.05 Aligned_cols=85 Identities=9% Similarity=-0.039 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHH
Q 026767 70 LYTDACIMLEEDDKEQMAFDLYRAATNVYIK--LEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQA 147 (233)
Q Consensus 70 ~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~--~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A 147 (233)
.-++-+-+.=+.|....=-.++.++|++--- ......++.+|.+++...+.--... ...-|.-+|-.+.+.+++.+|
T Consensus 237 LQq~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reA 315 (472)
T 3re2_A 237 LQQELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEA 315 (472)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHH
Confidence 3344444444444222212345566655332 1222338899999988776532221 223467888899999999999
Q ss_pred HHHHHHhh
Q 026767 148 EKCYNDCS 155 (233)
Q Consensus 148 ~~~~~~al 155 (233)
.+++-++-
T Consensus 316 l~~WA~Aa 323 (472)
T 3re2_A 316 IASWVDAG 323 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
No 327
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=32.22 E-value=2.2e+02 Score=23.70 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHH
Q 026767 5 PWDAAKHMESAAALAKELHN---------WREVADFYRKASELYN 40 (233)
Q Consensus 5 ~~~~a~~~~~~g~~~~~~g~---------~~eA~~~~~~A~~l~~ 40 (233)
.+..+.++.|+|.+|.+.+. .+.|..+|++|.-+|.
T Consensus 138 ~fE~a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~ 182 (380)
T 3c3r_A 138 GYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFL 182 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH
Confidence 56788889999988864221 4788899999988875
No 328
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=31.42 E-value=1.5e+02 Score=21.53 Aligned_cols=117 Identities=7% Similarity=-0.068 Sum_probs=69.0
Q ss_pred cCCHHHHHHHHHHHHHHH------------HHcCCchHHHHHHHHHHHHhh-h--CCHHHHHHHHHHHHHHHHhcCChHH
Q 026767 22 LHNWREVADFYRKASELY------------NECGRSQPASDALAKAARALE-D--AVPEDAIQLYTDACIMLEEDDKEQM 86 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~------------~~~g~~~~~a~~l~~lg~~~~-~--g~~~~A~~~~~~Al~~~~~~g~~~~ 86 (233)
.|..++.++...+-..-. -..-+=...-.+|..+|.++- . |+...-+.+|-+. +...
T Consensus 20 dG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~-------n~~s- 91 (172)
T 1wy6_A 20 DGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVIN-------NTLN- 91 (172)
T ss_dssp TTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHT-------TCCC-
T ss_pred hhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHh-------cchH-
Confidence 577777777766655421 122333445567888888887 3 8877777666432 2110
Q ss_pred HHHHHHHH-HHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 87 AFDLYRAA-TNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 87 ~~~~l~~l-g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
=+.++ -..+...|+-++=-+.+... .++....+..+..++.+|.+.|+..+|.+.+.+|.
T Consensus 92 ---e~vd~ALd~lv~~~KkDqLdki~~~~------l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC 152 (172)
T 1wy6_A 92 ---EHVNKALDILVIQGKRDKLEEIGREI------LKNNEVSASILVAIANALRRVGDERDATTLLIEAC 152 (172)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHH------C--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhccHhHHHHHHHHH------hccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 01122 23344566655543333321 23344445677889999999999999999888887
No 329
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=30.49 E-value=2e+02 Score=22.65 Aligned_cols=53 Identities=13% Similarity=-0.038 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEE-DD--KEQMAFDLYRAATNVYIK-LEKYADAATFLLRWGLAA 118 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~-~g--~~~~~~~~l~~lg~~~~~-~g~~~~A~~~~~~al~~~ 118 (233)
+.|.+.|++|.++... .. ++.-.+.++ |.+.+|.. +++.++|+.+.+++..-.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaL-NfSVFyYEIln~~~~Ac~lAk~Afd~A 204 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLAL-NYSVFYYEIQNAPEQACHLAKTAFDDA 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5677778888777653 22 444444333 34444443 677888877777766543
No 330
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=30.25 E-value=25 Score=23.18 Aligned_cols=43 Identities=9% Similarity=0.120 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 026767 23 HNWREVADFYRKASELYNEC--GRSQPASDALAKAARALEDAVPEDAIQLYTDACIM 77 (233)
Q Consensus 23 g~~~eA~~~~~~A~~l~~~~--g~~~~~a~~l~~lg~~~~~g~~~~A~~~~~~Al~~ 77 (233)
..+++|..+..+|+.+-+.. |+...+... |.+.+.++++++.+
T Consensus 11 ~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~------------YkkGi~eL~~Gi~V 55 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDEDEKAGQKEQAVEW------------YKKGIEELEKGIAV 55 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSSSGGGSHHH------------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCHHHHHHH------------HHHHHHHHHhhcCC
Confidence 34678888888888887764 776655433 34455556666554
No 331
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.71 E-value=1.2e+02 Score=25.92 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=28.2
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhcC
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQV 157 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~~ 157 (233)
+.....++--++.+|+.+|++.+|..+.++++..
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3445567788999999999999999999998743
No 332
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=29.39 E-value=1.9e+02 Score=23.02 Aligned_cols=52 Identities=19% Similarity=0.052 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHh-c----CChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEE-D----DKEQMAFDLYRAATNVYI-KLEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~-~----g~~~~~~~~l~~lg~~~~-~~g~~~~A~~~~~~al~~ 117 (233)
+.|.+.|++|.++... . -++--.+.+ .|.+.+|. -+++.++|+.+.++|..-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLa-LNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATI-LNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHH-HHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5778889999888752 3 244444433 34555555 478889998888888764
No 333
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=29.03 E-value=2.2e+02 Score=22.63 Aligned_cols=51 Identities=20% Similarity=0.061 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHH-cC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNE-CG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACI 76 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~-~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~ 76 (233)
+.|...|++|.++... .. +|-..+.+|+-.-..|+ .+++++|++..++|.+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455666666665532 22 23333344443333344 4666666666555543
No 334
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=28.90 E-value=2.1e+02 Score=22.48 Aligned_cols=53 Identities=23% Similarity=0.149 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHH-cC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNE-CG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIML 78 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~-~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~ 78 (233)
+.|...|++|.++... .. +|-..+.+|+-.-..|+ .+++++|++..++|.+-.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~A 204 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDA 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5788899999998753 32 34455555655455555 699999999888876544
No 335
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=28.35 E-value=2.2e+02 Score=22.55 Aligned_cols=52 Identities=12% Similarity=-0.082 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEE-DD--KEQMAFDLYRAATNVYIK-LEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~-~g--~~~~~~~~l~~lg~~~~~-~g~~~~A~~~~~~al~~ 117 (233)
+.|.+.|++|.++... .. ++.-.+.++ |.+.+|.+ +++.++|+.+.++|..-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaL-NfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLAL-NFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4556666666666542 22 333333333 33444443 56677776666665543
No 336
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=28.08 E-value=1.5e+02 Score=23.79 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=42.3
Q ss_pred HHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 98 YIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 98 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+.+.|+.++|++..+..+. ..+..+.....+...++-.|++++|.+.++.+..
T Consensus 7 ll~~g~L~~al~~~~~~VR------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~ 59 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIK------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIK 59 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHH------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHH------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4578899999998887774 3455566667788888889999999999998873
No 337
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=28.07 E-value=1.7e+02 Score=21.10 Aligned_cols=117 Identities=8% Similarity=-0.015 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHh
Q 026767 27 EVADFYRKASELYNECGRSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD----KEQMAFDLYRAATNVYIKL 101 (233)
Q Consensus 27 eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g----~~~~~~~~l~~lg~~~~~~ 101 (233)
-+...|+..+..| +..||...-.-+.+--.-.. .|.. .=...+++++..|.... |.+.. .+...++...
T Consensus 8 ~~~~~fE~~i~~y-~gdDPL~~w~~YI~W~e~~~P~g~~-~l~~lLErc~~~f~~~~~YknD~RyL-klWl~ya~~~--- 81 (152)
T 4a1g_A 8 NVLQMLEAHMQSY-KGNDPLGEWERYIQWVEENFPENKE-YLITLLEHLMKEFLDKKKYHNDPRFI-SYCLKFAEYN--- 81 (152)
T ss_dssp HHHHHHHHHTTSC-CSSCHHHHHHHHHHHHHTTCSSCTH-HHHHHHHHHHHHHTTCGGGTTCHHHH-HHHHHHHTTB---
T ss_pred HHHHHHHHHHHhC-CCCCCHHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHhcccccccCCHHHH-HHHHHHHHhc---
Confidence 3445677777776 45566544333333332222 3442 34578899999987765 45444 2444444332
Q ss_pred ccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 102 EKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 102 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+++.+.|+-... .++| ...+.-|..-+..+-..|++.+|.+.|+..+.
T Consensus 82 ---~dp~~if~~L~~--~~IG--~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~ 129 (152)
T 4a1g_A 82 ---SDLHQFFEFLYN--HGIG--TLSSPLYIAWAGHLEAQGELQHASAVLQRGIQ 129 (152)
T ss_dssp ---SCHHHHHHHHHT--TTTT--TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHH--CCCc--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 336666665442 2233 33455678888999999999999999999874
No 338
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=27.98 E-value=1.8e+02 Score=23.06 Aligned_cols=54 Identities=19% Similarity=0.141 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHH
Q 026767 26 REVADFYRKASELYNECG--RSQPASDALAKAARALE-DAVPEDAIQLYTDACIMLE 79 (233)
Q Consensus 26 ~eA~~~~~~A~~l~~~~g--~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~ 79 (233)
+.|...|++|.++..... +|-..+.+|+-.-..|+ .+++++|++..++|.+-.-
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai 229 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAI 229 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 568889999999882222 23344555555555566 6999999998888875443
No 339
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=27.00 E-value=4.2e+02 Score=25.32 Aligned_cols=42 Identities=17% Similarity=0.024 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 109 TFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 109 ~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
++++-++.++.+.+.+ -|+.+..|...++|...+.+.|.+.+
T Consensus 216 ~vLr~l~~Iy~k~~~~-----dy~~a~~~ai~LnD~~li~~if~~l~ 257 (963)
T 4ady_A 216 SILRKSFDFLMNMPNC-----DYLTLNKVVVNLNDAGLALQLFKKLK 257 (963)
T ss_dssp HHHHHHHHHHHHSSSC-----CHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCch-----hHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4556666666665321 36778888889999999999999864
No 340
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=26.56 E-value=2.4e+02 Score=23.46 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 66 DAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 66 ~A~~~~~~Al~~~~~~g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
++.++|++|.+........ +....-....-...+-.|+.+|..++..
T Consensus 217 q~~~~Y~~a~~~l~~~~~~-----i~~~W~~~v~~K~~~~~A~A~y~~a~~~ 263 (376)
T 3r9m_A 217 ETANFYQKADHTLSSLEPA-----YSAKWRKYLHLKMCFYTAYAYCYHGETL 263 (376)
T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667776666543211 1111111122233455666666666654
No 341
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=26.23 E-value=2.3e+02 Score=21.92 Aligned_cols=121 Identities=7% Similarity=-0.018 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh-hCC-H-HHHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHH
Q 026767 25 WREVADFYRKASELYNECGRSQPASDALAKAARALE-DAV-P-EDAIQLYTDACIMLEEDD----KEQMAFDLYRAATNV 97 (233)
Q Consensus 25 ~~eA~~~~~~A~~l~~~~g~~~~~a~~l~~lg~~~~-~g~-~-~~A~~~~~~Al~~~~~~g----~~~~~~~~l~~lg~~ 97 (233)
..+-...|++.+.-+....||...-.-+.+--.-.. .|. . ..=...+++++..|.... |.+.. .+...++..
T Consensus 51 l~~~r~~fE~~i~~~~~~dDPL~~w~~YIkW~ee~yP~g~~~~s~L~~lLErc~~~F~~~~rYknD~RyL-klWl~Ya~~ 129 (223)
T 4aez_C 51 LQKERMGHERKIETSESLDDPLQVWIDYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYL-RIWMQYVNY 129 (223)
T ss_dssp HHHHHHHHHHHHHHGGGSSCTHHHHHHHHHHHHHHCTTCCCTTTCHHHHHHHHHHHTTTCGGGTTCHHHH-HHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhCcCCCcchhhHHHHHHHHHHHhcccccccCCHHHH-HHHHHHHHc
Confidence 445556778888776667788766555555444444 443 1 123578999999998875 55544 244444442
Q ss_pred HHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 98 YIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 98 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
.+.+.++|.-... .++| ...+.-|..-+..+-..|++.+|...|+..+.
T Consensus 130 ------~~~p~~if~~L~~--~~IG--~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~ 178 (223)
T 4aez_C 130 ------IDEPVELFSFLAH--HHIG--QESSIFYEEYANYFESRGLFQKADEVYQKGKR 178 (223)
T ss_dssp ------CSCHHHHHHHHHH--TTCS--TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------cCCHHHHHHHHHH--CCcc--hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 2355566664442 2333 33455678888999999999999999999873
No 342
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=25.44 E-value=1.6e+02 Score=19.84 Aligned_cols=18 Identities=11% Similarity=0.141 Sum_probs=8.1
Q ss_pred HcCCHHHHHHHHHHHHHH
Q 026767 21 ELHNWREVADFYRKASEL 38 (233)
Q Consensus 21 ~~g~~~eA~~~~~~A~~l 38 (233)
+.|+|++|-.+.++|-+.
T Consensus 32 k~g~fe~A~~~l~eA~~~ 49 (105)
T 2e2a_A 32 ENGDFAKADSLVVEAGSC 49 (105)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 344444444444444443
No 343
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=24.94 E-value=2.2e+02 Score=21.33 Aligned_cols=35 Identities=11% Similarity=-0.102 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhcC
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEEDD 82 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~g 82 (233)
.+.-+.-+|.++. ++++.+|-+++.+|.....+.+
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 3344455566666 5666666666666666655443
No 344
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=24.66 E-value=16 Score=29.22 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHhc
Q 026767 48 ASDALAKAARALE-DAVPEDAIQLYTDACIMLEED 81 (233)
Q Consensus 48 ~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~~~~ 81 (233)
.|..+..-|.-+. .|+|++|+.+|+.|++++...
T Consensus 22 ~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 22 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3444444555555 589999999999999888764
No 345
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.58 E-value=1.2e+02 Score=25.93 Aligned_cols=52 Identities=10% Similarity=0.132 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEED---DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~---g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
+.-+.-++.|+...+.. |+... ..++.-++.+|+..|+|++|+++.++++..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk-~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNK-YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecH-HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 44455556666655432 32222 236777999999999999999999999864
No 346
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=24.45 E-value=1.4e+02 Score=25.76 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=27.0
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
.....++.-++.+|+.+|++.+|..+.++++.
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 44556778899999999999999999999873
No 347
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.64 E-value=1.5e+02 Score=25.38 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEED---DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~---g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
+.-+.-++.|+.+.+.. |+.. ...++.-++++|+-.|+|++|+++.++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~t-k~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVN-RWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCC-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeee-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44455556666655432 3322 2236777899999999999999999999864
No 348
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=23.46 E-value=2.9e+02 Score=22.29 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHhh-hC--CHHHHHHHHHHHHHHHH
Q 026767 7 DAAKHMESAAALAKELHN---WREVADFYRKASELYNE-CGRSQPASDALAKAARALE-DA--VPEDAIQLYTDACIMLE 79 (233)
Q Consensus 7 ~~a~~~~~~g~~~~~~g~---~~eA~~~~~~A~~l~~~-~g~~~~~a~~l~~lg~~~~-~g--~~~~A~~~~~~Al~~~~ 79 (233)
-+-+.|-..|.+--+.+- .+-|-++|.+|..+|++ .-|...+-.++.-+...+. .. ..+.-...-.++....-
T Consensus 97 lalrL~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~as 176 (298)
T 2r17_C 97 LPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAAS 176 (298)
T ss_dssp HHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHH
Confidence 344556666666555555 55666788888888887 6677777777776666555 21 12222222233332222
Q ss_pred hcCChHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHHHhHccCcc
Q 026767 80 EDDKEQMAFDLYRAATNVYIK----------LEKYADAATFLLRWGLAADKCNATN 125 (233)
Q Consensus 80 ~~g~~~~~~~~l~~lg~~~~~----------~g~~~~A~~~~~~al~~~~~~~~~~ 125 (233)
..=+......+....+.++-. ..+-.+.++++++++.++....+..
T Consensus 177 kLLKK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~d~~ 232 (298)
T 2r17_C 177 KLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPS 232 (298)
T ss_dssp TCSSHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSCCHH
T ss_pred hccCcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHhChh
Confidence 222233333344445554431 2467788888888888877664433
No 349
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=23.12 E-value=1.7e+02 Score=19.53 Aligned_cols=23 Identities=0% Similarity=-0.009 Sum_probs=12.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHH
Q 026767 17 ALAKELHNWREVADFYRKASELY 39 (233)
Q Consensus 17 ~~~~~~g~~~eA~~~~~~A~~l~ 39 (233)
.-..+.|+|++|-.+.++|-+.+
T Consensus 26 l~~Ak~g~fe~A~~~l~eA~~~l 48 (103)
T 1wcr_A 26 LKQAKQGDFAAAKAMMDQSRMAL 48 (103)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHH
Confidence 33344556666555555555544
No 350
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.80 E-value=1.3e+02 Score=25.79 Aligned_cols=51 Identities=12% Similarity=-0.073 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhc--------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEED--------DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGL 116 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~--------g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~ 116 (233)
+.-+.-++.|+.+.... |+. ....+..-++++|+..++|++|..+.++++.
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~-tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKP-NTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSC-CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCccc-CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 44455556666655321 222 2234677799999999999999999999874
No 351
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=22.38 E-value=1.6e+02 Score=24.99 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=26.4
Q ss_pred chHHHhHHHHHHHHHhhCCHHHHHHHHHHhh
Q 026767 125 NSQCKAYLSAIIVYLYANDFKQAEKCYNDCS 155 (233)
Q Consensus 125 ~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al 155 (233)
.....++.-++.+|+.+|++.+|..+.++++
T Consensus 187 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi 217 (454)
T 3myv_A 187 MNKYAARALLARIYLYHDDNRKAFDLADQLI 217 (454)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 4455677889999999999999999999887
No 352
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.36 E-value=1.6e+02 Score=25.03 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=27.1
Q ss_pred cchHHHhHHHHHHHHHhhCCHHHHHHHHHHhhc
Q 026767 124 TNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQ 156 (233)
Q Consensus 124 ~~~~a~~~~~lg~~~~~~gd~~~A~~~~~~al~ 156 (233)
+.....++.-++.+|+.+|++.+|..+.++++.
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 344556778889999999999999999998873
No 353
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=22.12 E-value=19 Score=28.75 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q 026767 9 AKHMESAAALAKELHNWREVADFYRKASELYNEC 42 (233)
Q Consensus 9 a~~~~~~g~~~~~~g~~~eA~~~~~~A~~l~~~~ 42 (233)
|..+..-|.-+-..|++++|+.+|.+|++++...
T Consensus 23 Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 23 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp ----------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3334444555556788888888888888877543
No 354
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=21.93 E-value=1.5e+02 Score=25.63 Aligned_cols=52 Identities=12% Similarity=0.058 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhc------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 026767 65 EDAIQLYTDACIMLEED------DKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLA 117 (233)
Q Consensus 65 ~~A~~~~~~Al~~~~~~------g~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (233)
+.-+.-+..|+...+.. |+. ....++.-++.+|+..++|++|+.+.++++..
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~-tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKI-DNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSC-CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCcccCCcc-cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34455556666665321 222 22336777999999999999999999999864
No 355
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=21.78 E-value=2e+02 Score=19.83 Aligned_cols=15 Identities=20% Similarity=-0.276 Sum_probs=6.1
Q ss_pred CCHHHHHHHHHHHHH
Q 026767 62 AVPEDAIQLYTDACI 76 (233)
Q Consensus 62 g~~~~A~~~~~~Al~ 76 (233)
|++++|.+.+++|-+
T Consensus 51 gdfe~A~~~l~eA~e 65 (120)
T 3l8r_A 51 KNYILAEQKLQEAND 65 (120)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 344444444444433
No 356
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=21.19 E-value=2.4e+02 Score=23.36 Aligned_cols=14 Identities=36% Similarity=0.809 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHH
Q 026767 66 DAIQLYTDACIMLE 79 (233)
Q Consensus 66 ~A~~~~~~Al~~~~ 79 (233)
++.++|.+|.+...
T Consensus 211 q~~~~Y~~a~~~l~ 224 (363)
T 3rau_A 211 QVVDYYKEACRALE 224 (363)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 34455555555544
No 357
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=21.07 E-value=2.9e+02 Score=21.36 Aligned_cols=57 Identities=14% Similarity=0.026 Sum_probs=42.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHH
Q 026767 22 LHNWREVADFYRKASELYNEC---GRSQPASDALAKAARALE-DAVPEDAIQLYTDACIML 78 (233)
Q Consensus 22 ~g~~~eA~~~~~~A~~l~~~~---g~~~~~a~~l~~lg~~~~-~g~~~~A~~~~~~Al~~~ 78 (233)
.|+.+.|...|++|.++.... =+|-..+.+|+-.-..|+ .+++++|+...++|..+.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 455788999999999998742 234445555655555566 699999999999998764
No 358
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=20.49 E-value=2.1e+02 Score=19.39 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=10.4
Q ss_pred HHcCCHHHHHHHHHHHHHHH
Q 026767 20 KELHNWREVADFYRKASELY 39 (233)
Q Consensus 20 ~~~g~~~eA~~~~~~A~~l~ 39 (233)
.+.|+|++|-+..++|-+.+
T Consensus 33 Ak~gdfe~A~~~l~eA~~~l 52 (109)
T 3k1s_A 33 AKQGKMAEADEAMVKAKEAI 52 (109)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHH
Confidence 34555555555555554444
No 359
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=20.16 E-value=2.6e+02 Score=20.39 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHccCcchHHHhHHHHHHHHHhhCC
Q 026767 68 IQLYTDACIMLEEDD----KEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYAND 143 (233)
Q Consensus 68 ~~~~~~Al~~~~~~g----~~~~~~~~l~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~gd 143 (233)
...+++++..|.... |.+.. .+...++... +.+.++|..... ..+| ...+.-|..-+..+-..|+
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyL-klWl~ya~~~------~~p~~if~~L~~--~~IG--~~~AlfY~~wA~~lE~~~~ 111 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFL-NLWLKLGRLC------NEPLDMYSYLHN--QGIG--VSLAQFYISWAEEYEAREN 111 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHH-HHHHHHHHHC------SCHHHHHHHHHH--TTSS--TTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhhhhhhccCHHHH-HHHHHHHHhc------CCHHHHHHHHHH--CCcc--hhhHHHHHHHHHHHHHcCC
Confidence 567888888887754 55554 3444555542 335556654432 2333 3445567888899999999
Q ss_pred HHHHHHHHHHhhc
Q 026767 144 FKQAEKCYNDCSQ 156 (233)
Q Consensus 144 ~~~A~~~~~~al~ 156 (233)
+.+|.+.|+..+.
T Consensus 112 ~~~A~~Iy~~Gi~ 124 (164)
T 2wvi_A 112 FRKADAIFQEGIQ 124 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999983
Done!