Your job contains 1 sequence.
>026768
MQPTIGPDGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQAL
IQYPDITTAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLA
TQQIPSVPAAPSVWQSHQAAPMYSGSEYATAVPGQVPPGQVPSWNPSAQAGPAAYVSASG
PFPGQTYPQSPVFAYATAPTPTGSSPLSLTQPGVPPVRPGGASPPGHPPYYVR
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026768
(233 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102142 - symbol:PTB1 "polypyrimidine tract-bi... 553 1.9e-53 1
TAIR|locus:2163746 - symbol:PTB2 "AT5G53180" species:3702... 461 9.7e-46 2
ZFIN|ZDB-GENE-050522-492 - symbol:ptbp1a "polypyrimidine ... 257 2.9e-21 1
UNIPROTKB|O95758 - symbol:PTBP3 "Polypyrimidine tract-bin... 222 9.6e-21 2
MGI|MGI:97791 - symbol:Ptbp1 "polypyrimidine tract bindin... 235 1.4e-20 2
UNIPROTKB|Q06A95 - symbol:ROD1 "ROD1" species:9823 "Sus s... 219 2.0e-20 2
UNIPROTKB|K7EK45 - symbol:PTBP1 "Polypyrimidine tract-bin... 240 2.7e-20 1
ZFIN|ZDB-GENE-060810-49 - symbol:ptbp2b "polypyrimidine t... 220 6.0e-20 2
UNIPROTKB|A8YXY5 - symbol:PTBP1 "PTBP1 protein" species:9... 240 9.8e-20 1
RGD|62047 - symbol:Ptbp1 "polypyrimidine tract binding pr... 240 1.9e-19 1
UNIPROTKB|Q6P736 - symbol:Ptbp1 "Polypyrimidine tract bin... 240 1.9e-19 1
UNIPROTKB|J9P5T5 - symbol:PTBP1 "Uncharacterized protein"... 240 1.9e-19 1
UNIPROTKB|F1PCJ7 - symbol:PTBP1 "Uncharacterized protein"... 240 1.9e-19 1
ZFIN|ZDB-GENE-030131-9796 - symbol:ptbp1b "polypyrimidine... 239 2.7e-19 1
UNIPROTKB|F1LM18 - symbol:Ptbp1 "Polypyrimidine tract-bin... 238 3.1e-19 1
UNIPROTKB|F1S6R7 - symbol:PTBP1 "Polypyrimidine tract-bin... 237 4.0e-19 1
UNIPROTKB|Q29099 - symbol:PTBP1 "Polypyrimidine tract-bin... 237 4.0e-19 1
UNIPROTKB|D4AB53 - symbol:Ptbp1 "Polypyrimidine tract-bin... 235 5.8e-19 1
UNIPROTKB|Q8WN55 - symbol:PTBP1 "Polypyrimidine tract-bin... 235 5.9e-19 1
UNIPROTKB|P26599 - symbol:PTBP1 "Polypyrimidine tract-bin... 235 5.9e-19 1
UNIPROTKB|F1P5K0 - symbol:PTBP1 "Uncharacterized protein"... 229 2.6e-18 1
UNIPROTKB|E1BVR1 - symbol:PTBP1 "Uncharacterized protein"... 229 2.6e-18 1
UNIPROTKB|B4DI28 - symbol:PTBP2 "cDNA FLJ55578, highly si... 220 3.6e-18 1
RGD|621671 - symbol:Ptbp3 "polypyrimidine tract binding p... 226 5.4e-18 1
MGI|MGI:1923334 - symbol:Ptbp3 "polypyrimidine tract bind... 225 6.9e-18 1
ZFIN|ZDB-GENE-050320-141 - symbol:ptbp2a "polypyrimidine ... 224 8.4e-18 1
UNIPROTKB|F1S549 - symbol:LOC100515203 "Uncharacterized p... 220 1.1e-17 1
UNIPROTKB|I3LP39 - symbol:LOC100515203 "Uncharacterized p... 220 1.1e-17 1
UNIPROTKB|I3LDE4 - symbol:LOC100515203 "Uncharacterized p... 220 1.2e-17 1
ZFIN|ZDB-GENE-091116-1 - symbol:ptbp3 "polypyrimidine tra... 222 1.5e-17 1
FB|FBgn0011224 - symbol:heph "hephaestus" species:7227 "D... 213 1.5e-17 2
TAIR|locus:2018630 - symbol:PTB3 "polypyrimidine tract-bi... 218 2.4e-17 1
UNIPROTKB|F1PXP9 - symbol:PTBP3 "Uncharacterized protein"... 220 2.4e-17 1
UNIPROTKB|F1MPG6 - symbol:F1MPG6 "Uncharacterized protein... 220 2.4e-17 1
UNIPROTKB|Q9UKA9 - symbol:PTBP2 "Polypyrimidine tract-bin... 220 2.5e-17 1
MGI|MGI:1860489 - symbol:Ptbp2 "polypyrimidine tract bind... 220 2.5e-17 1
RGD|1359267 - symbol:Ptbp2 "polypyrimidine tract binding ... 220 2.5e-17 1
UNIPROTKB|F1NRD6 - symbol:PTBP2 "Uncharacterized protein"... 220 2.5e-17 1
UNIPROTKB|E2RSK4 - symbol:PTBP2 "Uncharacterized protein"... 220 2.5e-17 1
UNIPROTKB|B4DSS8 - symbol:PTBP2 "Polypyrimidine tract-bin... 220 2.7e-17 1
DICTYBASE|DDB_G0278105 - symbol:DDB_G0278105 "heterogeneo... 219 3.2e-17 1
UNIPROTKB|E1C5J2 - symbol:E1C5J2 "Uncharacterized protein... 206 1.1e-16 1
UNIPROTKB|F1ND44 - symbol:F1ND44 "Uncharacterized protein... 206 2.8e-16 1
RGD|727953 - symbol:Smptb "polypyrimidine tract-binding p... 211 2.9e-16 1
WB|WBGene00004207 - symbol:ptb-1 species:6239 "Caenorhabd... 204 1.8e-15 1
UNIPROTKB|H7BXH8 - symbol:HNRPLL "Heterogeneous nuclear r... 188 8.8e-15 1
UNIPROTKB|F1M040 - symbol:F1M040 "Uncharacterized protein... 176 1.0e-14 2
UNIPROTKB|C9IYN3 - symbol:HNRPLL "Heterogeneous nuclear r... 185 1.8e-14 1
UNIPROTKB|F1P0T4 - symbol:HNRPLL "Uncharacterized protein... 191 2.7e-14 1
DICTYBASE|DDB_G0284321 - symbol:DDB_G0284321 "putative po... 194 3.9e-14 1
UNIPROTKB|Q8WVV9 - symbol:HNRPLL "Heterogeneous nuclear r... 188 7.6e-14 1
MGI|MGI:1919942 - symbol:Hnrpll "heterogeneous nuclear ri... 188 8.9e-14 1
RGD|1305861 - symbol:Hnrpll "heterogeneous nuclear ribonu... 188 8.9e-14 1
UNIPROTKB|I3L8B8 - symbol:HNRPLL "Uncharacterized protein... 185 1.3e-13 1
UNIPROTKB|I3LG16 - symbol:HNRPLL "Uncharacterized protein... 185 1.6e-13 1
UNIPROTKB|F1N7G0 - symbol:HNRPLL "Uncharacterized protein... 185 1.6e-13 1
UNIPROTKB|D6W592 - symbol:HNRPLL "Heterogeneous nuclear r... 185 1.6e-13 1
UNIPROTKB|J9P3Y8 - symbol:HNRPLL "Uncharacterized protein... 185 1.6e-13 1
ZFIN|ZDB-GENE-040426-2707 - symbol:hnrnpl2 "heterogeneous... 182 3.1e-13 1
ZFIN|ZDB-GENE-040426-710 - symbol:hnrpl "heterogeneous nu... 177 1.1e-12 1
UNIPROTKB|F1LZ79 - symbol:F1LZ79 "Uncharacterized protein... 176 1.2e-12 1
FB|FBgn0003435 - symbol:sm "smooth" species:7227 "Drosoph... 174 2.0e-12 1
MGI|MGI:104816 - symbol:Hnrnpl "heterogeneous nuclear rib... 175 2.2e-12 1
UNIPROTKB|F2Z3R2 - symbol:Hnrnpl "Protein Hnrnpl" species... 175 2.2e-12 1
UNIPROTKB|E1BIB4 - symbol:HNRNPL "Uncharacterized protein... 175 2.2e-12 1
UNIPROTKB|E2R944 - symbol:HNRNPL "Uncharacterized protein... 175 2.2e-12 1
UNIPROTKB|P14866 - symbol:HNRNPL "Heterogeneous nuclear r... 175 2.2e-12 1
UNIPROTKB|F1LPP9 - symbol:Hnrnpl "Protein Hnrnpl" species... 175 2.4e-12 1
DICTYBASE|DDB_G0275365 - symbol:DDB_G0275365 "Heterogeneo... 175 2.9e-12 1
GENEDB_PFALCIPARUM|PFF0320c - symbol:PFF0320c "polypyrimi... 163 5.2e-11 1
UNIPROTKB|C6KSR3 - symbol:PFF0320c "Polypyrimidine tract ... 163 5.2e-11 1
UNIPROTKB|F1LY02 - symbol:F1LY02 "Uncharacterized protein... 161 1.6e-10 1
UNIPROTKB|F1LQ48 - symbol:Hnrnpl "Protein Hnrnpl" species... 161 2.2e-10 1
WB|WBGene00016624 - symbol:C44B7.2 species:6239 "Caenorha... 150 2.0e-08 1
UNIPROTKB|K7ES59 - symbol:PTBP1 "Polypyrimidine tract-bin... 138 3.8e-08 1
UNIPROTKB|K7EKJ7 - symbol:PTBP1 "Polypyrimidine tract-bin... 138 8.6e-08 1
UNIPROTKB|F6Q0P6 - symbol:PTBP2 "Uncharacterized protein"... 135 2.3e-07 1
UNIPROTKB|C9JJZ7 - symbol:HNRPLL "Heterogeneous nuclear r... 108 1.2e-05 1
>TAIR|locus:2102142 [details] [associations]
symbol:PTB1 "polypyrimidine tract-binding protein 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IGI] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IEP] [GO:0043484 "regulation
of RNA splicing" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0009845 "seed germination" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0000932 GO:GO:0009846 EMBL:AC008261
EMBL:AF076924 IPI:IPI00548173 PIR:T51814 RefSeq:NP_186764.1
UniGene:At.18320 ProteinModelPortal:Q9MAC5 SMR:Q9MAC5 STRING:Q9MAC5
PaxDb:Q9MAC5 PRIDE:Q9MAC5 EnsemblPlants:AT3G01150.1 GeneID:821129
KEGG:ath:AT3G01150 GeneFarm:5074 TAIR:At3g01150 eggNOG:NOG307589
HOGENOM:HOG000238077 InParanoid:Q9MAC5 KO:K14948 OMA:ESHEVSI
PhylomeDB:Q9MAC5 ProtClustDB:CLSN2684978 Genevestigator:Q9MAC5
GermOnline:AT3G01150 Uniprot:Q9MAC5
Length = 399
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 109/147 (74%), Positives = 123/147 (83%)
Query: 1 MQPTIGPDGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQAL 60
MQP +G DGKK E +SNVLL IENMQYAVTVDVL+TVFSA+GTVQK+AIFEKNG TQAL
Sbjct: 227 MQPALGADGKKVESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQAL 286
Query: 61 IQYPDITTAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLA 120
IQY DI TAA+AKE+LEGHCIYDGGYCKL LSYSRHTDLNVKA+SDKSRDYT+ D +LL
Sbjct: 287 IQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLV 346
Query: 121 TQQIPSVP--AAPSVWQSHQAAPMYSG 145
Q+ P+V A P+ WQ+ QA YSG
Sbjct: 347 AQKGPAVSGSAPPAGWQNPQAQSQYSG 373
Score = 241 (89.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 51/107 (47%), Positives = 72/107 (67%)
Query: 13 ELESNVLLASIENMQ-YAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAV 71
++ NVLL + E ++ + V++DV++ VFSAFG V K+A FEK G QAL+Q+ D+ TA+
Sbjct: 106 DVPGNVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASA 165
Query: 72 AKESLEGHCI--Y----DGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
A+ +L+G I Y G C L +SYS HTDLN+K S +SRDYT
Sbjct: 166 ARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYT 212
Score = 78 (32.5 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 27/64 (42%), Positives = 29/64 (45%)
Query: 168 AQAGPAAYVSASGPFPGQTYPQSPVFAYATAPTPTGSSPLSLTQPGVPPVRPGGASPPGH 227
AQ GPA VS S P G PQ+ Y+ G SP P P GASP G
Sbjct: 347 AQKGPA--VSGSAPPAGWQNPQAQS-QYSGY----GGSPYMY-----PSSDPNGASPSGQ 394
Query: 228 PPYY 231
PPYY
Sbjct: 395 PPYY 398
>TAIR|locus:2163746 [details] [associations]
symbol:PTB2 "AT5G53180" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IGI] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IEP] [GO:0043484 "regulation
of RNA splicing" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0009845 "seed germination" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0000932 GO:GO:0009846 EMBL:AB025622
HOGENOM:HOG000238077 KO:K14948 EMBL:BT015760 EMBL:BT020199
IPI:IPI00533493 RefSeq:NP_200130.1 UniGene:At.43107
ProteinModelPortal:Q9FGL9 SMR:Q9FGL9 IntAct:Q9FGL9 STRING:Q9FGL9
PaxDb:Q9FGL9 PRIDE:Q9FGL9 EnsemblPlants:AT5G53180.1 GeneID:835399
KEGG:ath:AT5G53180 GeneFarm:5075 TAIR:At5g53180 eggNOG:NOG263807
InParanoid:Q9FGL9 OMA:KKMEPES PhylomeDB:Q9FGL9
ProtClustDB:CLSN2720458 Genevestigator:Q9FGL9 GermOnline:AT5G53180
Uniprot:Q9FGL9
Length = 429
Score = 461 (167.3 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 89/138 (64%), Positives = 109/138 (78%)
Query: 2 QPTIGPDGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALI 61
Q +G DGKK E ESNVLLASIENMQYAVT+DVL+ VF+AFG VQK+A+F+KNGG QALI
Sbjct: 229 QVAVGVDGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALI 288
Query: 62 QYPDITTAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLAT 121
QY D+ TA VAKE+LEGHCIYDGG+CKLH++YSRHTDL++K +D+SRDYT+ + +
Sbjct: 289 QYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMP 348
Query: 122 QQIPSVPAAPSVWQSHQA 139
QQ P A + Q H A
Sbjct: 349 QQPVQNPYAGNPQQYHAA 366
Score = 221 (82.9 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 52/107 (48%), Positives = 66/107 (61%)
Query: 13 ELESNVLLASIENMQYA-VTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAV 71
++ NVLL +IE V++DVL+ VFSAFG V K+ FEK G QAL+Q+ D TA
Sbjct: 107 DVVGNVLLVTIEGDDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATA 166
Query: 72 AKESLEGHCI--Y----DGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
AK +L+G I Y G C L ++YS HTDL VK S +SRDYT
Sbjct: 167 AKLALDGRSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYT 213
Score = 36 (17.7 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 219 PGGASPPGH 227
PGG PP H
Sbjct: 413 PGGHMPPQH 421
>ZFIN|ZDB-GENE-050522-492 [details] [associations]
symbol:ptbp1a "polypyrimidine tract binding protein
1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060472 "positive regulation of cortical granule exocytosis by
elevation of cytosolic calcium ion concentration" evidence=IMP]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
[GO:0045746 "negative regulation of Notch signaling pathway"
evidence=IMP] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IMP] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050522-492 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0009953 GO:GO:0045746
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548
KO:K13218 OMA:SEECAQT eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ GO:GO:0060729 EMBL:CR788230 EMBL:BC095372
IPI:IPI00607308 RefSeq:NP_001018313.1 UniGene:Dr.45492 SMR:Q503D3
Ensembl:ENSDART00000017668 GeneID:323490 KEGG:dre:323490 CTD:323490
InParanoid:Q503D3 NextBio:20808275 GO:GO:0060472 Uniprot:Q503D3
Length = 574
Score = 257 (95.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 73/175 (41%), Positives = 91/175 (52%)
Query: 8 DGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDIT 67
DG +S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D
Sbjct: 183 DGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALVQYSDGM 242
Query: 68 TAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSV 127
TA AK SL+G IY+ C L +S+S+ T LNVK +DKSRDYT D +Q PS
Sbjct: 243 TAQHAKLSLDGQNIYNA-CCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQ--PSF 299
Query: 128 PAAPSVWQSHQAAPMYSGSEYATAXXXXXXXXXXXSWNPSAQAGPA-AYVSASGP 181
A + A + S S YA A + S Q PA A S S P
Sbjct: 300 DAQTMAAAALTAPGIISASPYAGAHGFPQAFAIQQAAGLSLQGMPAGALASLSVP 354
>UNIPROTKB|O95758 [details] [associations]
symbol:PTBP3 "Polypyrimidine tract-binding protein 3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0045595 "regulation of cell
differentiation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471105
GO:GO:0033119 GO:GO:0009653 GO:GO:0043249 TIGRFAMs:TIGR01649
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ EMBL:AK001685 EMBL:AK302558 EMBL:CR749471
EMBL:AL158824 EMBL:AL359073 EMBL:BC039896 EMBL:BC044585
EMBL:BI463123 EMBL:AB023967 IPI:IPI00159072 IPI:IPI00384710
IPI:IPI00470879 IPI:IPI00640632 IPI:IPI00915287 IPI:IPI00915299
IPI:IPI00915400 RefSeq:NP_001157260.1 RefSeq:NP_001157262.1
RefSeq:NP_001231826.1 RefSeq:NP_001231827.1 RefSeq:NP_005147.3
UniGene:Hs.269988 ProteinModelPortal:O95758 SMR:O95758
IntAct:O95758 STRING:O95758 PhosphoSite:O95758 PaxDb:O95758
PRIDE:O95758 Ensembl:ENST00000210227 Ensembl:ENST00000334318
Ensembl:ENST00000343327 Ensembl:ENST00000374255
Ensembl:ENST00000374257 Ensembl:ENST00000458258 GeneID:9991
KEGG:hsa:9991 UCSC:uc004bfv.3 UCSC:uc004bfw.3 UCSC:uc004bfx.3
UCSC:uc004bfz.3 CTD:9991 GeneCards:GC09M114981 H-InvDB:HIX0008290
HGNC:HGNC:10253 MIM:607527 neXtProt:NX_O95758 PharmGKB:PA34625
OMA:PPSVTMD GenomeRNAi:9991 NextBio:37743 ArrayExpress:O95758
Bgee:O95758 CleanEx:HS_ROD1 Genevestigator:O95758
GermOnline:ENSG00000119314 Uniprot:O95758
Length = 552
Score = 222 (83.2 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 52/112 (46%), Positives = 69/112 (61%)
Query: 6 GPDGKKKEL--ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQY 63
GP + L +S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY
Sbjct: 167 GPSNEGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQY 226
Query: 64 PDITTAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
D A AK +L+G IY+ C L + +S+ T LNVK +DKSRD+T D
Sbjct: 227 ADPVNAHYAKMALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 277
Score = 53 (23.7 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 175 YVSASGPFPGQTYPQSPVFAYATAPTPTGSSPLSLTQPGVPP--VRPGGASPPGH 227
Y A+G P +PQ+ + P G PL++T V PG + PG+
Sbjct: 305 YAGAAGFAPAIGFPQATGLSVPAVPGALG--PLTITSSAVTGRMAIPGASGIPGN 357
>MGI|MGI:97791 [details] [associations]
symbol:Ptbp1 "polypyrimidine tract binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0033119 "negative regulation of RNA
splicing" evidence=ISO] [GO:0036002 "pre-mRNA binding"
evidence=ISO] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=ISO] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=ISO] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:97791 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048025
GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548 GO:GO:0051148
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X52101 IPI:IPI00749991
UniGene:Mm.265610 ProteinModelPortal:P17225 SMR:P17225
MINT:MINT-1862139 STRING:P17225 PhosphoSite:P17225 PaxDb:P17225
PRIDE:P17225 ChiTaRS:PTBP1 CleanEx:MM_PTBP1 Genevestigator:P17225
GermOnline:ENSMUSG00000006498 Uniprot:P17225
Length = 527
Score = 235 (87.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 58/126 (46%), Positives = 77/126 (61%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 179 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 238
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 239 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 289
Query: 135 QSHQAA 140
Q+ AA
Sbjct: 290 QTMAAA 295
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 203 GSSPLSLTQPG 213
GSSPL +PG
Sbjct: 428 GSSPLRFKKPG 438
>UNIPROTKB|Q06A95 [details] [associations]
symbol:ROD1 "ROD1" species:9823 "Sus scrofa" [GO:0033119
"negative regulation of RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0033119 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ OMA:PPSVTMD EMBL:CU234201
EMBL:DQ972969 RefSeq:NP_001070683.1 UniGene:Ssc.16910 SMR:Q06A95
Ensembl:ENSSSCT00000006012 GeneID:768100 KEGG:ssc:768100
CTD:100701891 Uniprot:Q06A95
Length = 523
Score = 219 (82.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 49/101 (48%), Positives = 65/101 (64%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY D A AK
Sbjct: 147 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKM 206
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ T LNVK +DKSRD+T D
Sbjct: 207 ALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 246
Score = 52 (23.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 175 YVSASGPFPGQTYPQSPVFAYATAPTPTGSSPLSLTQPGVPP--VRPGGASPPGH 227
Y A+G P +PQ+ + P PL++T V PG PG+
Sbjct: 274 YAGAAGFAPAIGFPQATGLSVPAGLGPGALGPLAITSSAVTGRMAMPGTGGIPGN 328
>UNIPROTKB|K7EK45 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000585956 Uniprot:K7EK45
Length = 256
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 5 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 64
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 65 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 115
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 116 QTMAAAFGAPGIISASPYAGA 136
>ZFIN|ZDB-GENE-060810-49 [details] [associations]
symbol:ptbp2b "polypyrimidine tract binding protein
2b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060810-49 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 KO:K14948
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ EMBL:BX005269 IPI:IPI00855280
RefSeq:NP_001093477.1 UniGene:Dr.75530 SMR:A5PM68
Ensembl:ENSDART00000038648 GeneID:562434 KEGG:dre:562434 CTD:562434
OMA:YTAVTPQ NextBio:20884409 Uniprot:A5PM68
Length = 538
Score = 220 (82.5 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 49/97 (50%), Positives = 62/97 (63%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
S VL I+NM Y VT+DVL +FS FGTV K+ F KN QAL+Q+ D A AK S
Sbjct: 172 SPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLS 231
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L+G IY+ C L + +S+ +LNVK +DKSRDYT
Sbjct: 232 LDGQNIYNS-CCTLRIDFSKLVNLNVKYNNDKSRDYT 267
Score = 47 (21.6 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 165 NPSAQAGPAAYV---SASGPFPGQTYPQSPVFAYATAPTPTGSSPLS 208
+PS P+ V S+ G FP SP+ A A A G LS
Sbjct: 292 SPSLLGTPSGMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALS 338
>UNIPROTKB|A8YXY5 [details] [associations]
symbol:PTBP1 "PTBP1 protein" species:9913 "Bos taurus"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
UniGene:Bt.9031 HOVERGEN:HBG069548 EMBL:DAAA02020232 EMBL:BC103383
IPI:IPI00968681 SMR:A8YXY5 Ensembl:ENSBTAT00000066124
Uniprot:A8YXY5
Length = 446
Score = 240 (89.5 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 290
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 291 QTMAAAFGAPGIMSASPYAGA 311
>RGD|62047 [details] [associations]
symbol:Ptbp1 "polypyrimidine tract binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA;TAS]
[GO:0004519 "endonuclease activity" evidence=TAS] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0033119
"negative regulation of RNA splicing" evidence=ISO] [GO:0036002
"pre-mRNA binding" evidence=ISO] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0051148
"negative regulation of muscle cell differentiation"
evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:62047
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697 GO:GO:0004519
GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
GO:GO:0051148 eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X60789
EMBL:X60790 EMBL:X74565 IPI:IPI00231555 IPI:IPI00390239 PIR:S15552
PIR:S36629 UniGene:Rn.64440 ProteinModelPortal:Q00438 SMR:Q00438
STRING:Q00438 PhosphoSite:Q00438 PRIDE:Q00438 UCSC:RGD:62047
InParanoid:Q00438 ChEMBL:CHEMBL2786 NextBio:609388
ArrayExpress:Q00438 Genevestigator:Q00438
GermOnline:ENSRNOG00000010448 Uniprot:Q00438
Length = 555
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 179 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 238
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 239 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 289
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 290 QTMAAAFGAPGIMSASPYAGA 310
>UNIPROTKB|Q6P736 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract binding protein 1,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:62047 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH474029 TIGRFAMs:TIGR01649
CTD:5725 HOVERGEN:HBG069548 KO:K13218 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ IPI:IPI00390239 UniGene:Rn.64440 EMBL:BC061858
RefSeq:NP_001257986.1 RefSeq:NP_071961.2 SMR:Q6P736 STRING:Q6P736
Ensembl:ENSRNOT00000030357 GeneID:29497 KEGG:rno:29497
InParanoid:Q6P736 Genevestigator:Q6P736 Uniprot:Q6P736
Length = 556
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 179 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 238
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 239 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 289
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 290 QTMAAAFGAPGIMSASPYAGA 310
>UNIPROTKB|J9P5T5 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 CTD:5725 KO:K13218 EMBL:AAEX03012673
RefSeq:XP_542215.2 ProteinModelPortal:J9P5T5
Ensembl:ENSCAFT00000049054 GeneID:485097 KEGG:cfa:485097
Uniprot:J9P5T5
Length = 557
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 290
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 291 QTMAAAFGAPGIMSASPYAGA 311
>UNIPROTKB|F1PCJ7 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051148 "negative regulation of muscle cell
differentiation" evidence=IEA] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:SEECAQT GO:GO:0051148 EMBL:AAEX03012673
Ensembl:ENSCAFT00000031317 Uniprot:F1PCJ7
Length = 558
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/141 (45%), Positives = 84/141 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 181 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 240
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 241 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 291
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 292 QTMAAAFGAPGIMSASPYAGA 312
>ZFIN|ZDB-GENE-030131-9796 [details] [associations]
symbol:ptbp1b "polypyrimidine tract binding
protein 1b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-9796
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BC091854 IPI:IPI00613822
UniGene:Dr.75263 ProteinModelPortal:Q58EL3 STRING:Q58EL3
InParanoid:Q58EL3 ArrayExpress:Q58EL3 Bgee:Q58EL3 Uniprot:Q58EL3
Length = 586
Score = 239 (89.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 63/142 (44%), Positives = 81/142 (57%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
S VL +EN+ Y VT+DVL+ +FS FGTV KV F KN QAL+Q+ D TA AK +
Sbjct: 210 SPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLA 269
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD------QTLLATQQIPSVPA 129
L+G IY+G C L +S+S+ T LNVK +DKSRDYT D Q L + + A
Sbjct: 270 LDGQNIYNG-CCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPALEHHAVAAAFA 328
Query: 130 APSVWQSHQAAPMYSGSEYATA 151
AP + AAP S + A
Sbjct: 329 APGIIS---AAPYASAHAFPPA 347
>UNIPROTKB|F1LM18 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 IPI:IPI00562850
Ensembl:ENSRNOT00000044865 ArrayExpress:F1LM18 Uniprot:F1LM18
Length = 554
Score = 238 (88.8 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 63/139 (45%), Positives = 83/139 (59%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 179 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 238
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 239 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 289
Query: 135 QSHQAA---P-MYSGSEYA 149
Q+ AA P + S S YA
Sbjct: 290 QTMAAAFGAPGIMSASPYA 308
>UNIPROTKB|F1S6R7 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:SEECAQT GO:GO:0051148 EMBL:FP015903 Ensembl:ENSSSCT00000014665
Uniprot:F1S6R7
Length = 557
Score = 237 (88.5 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 64/141 (45%), Positives = 83/141 (58%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDNQPSLD 290
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 291 QTMAAAFGAPGIMSASPYAGA 311
>UNIPROTKB|Q29099 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=ISS] [GO:0000381 "regulation
of alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649
CTD:5725 HOVERGEN:HBG069548 KO:K13218 GO:GO:0051148
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X93009 PIR:S68857
RefSeq:NP_999396.1 UniGene:Ssc.16210 ProteinModelPortal:Q29099
SMR:Q29099 STRING:Q29099 PRIDE:Q29099 GeneID:397461 KEGG:ssc:397461
OrthoDB:EOG4GMTXQ Uniprot:Q29099
Length = 557
Score = 237 (88.5 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 64/141 (45%), Positives = 83/141 (58%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDNQPSLD 290
Query: 135 QSHQAA---P-MYSGSEYATA 151
Q+ AA P + S S YA A
Sbjct: 291 QTMAAAFGAPGIMSASPYAGA 311
>UNIPROTKB|D4AB53 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
IPI:IPI00390801 Ensembl:ENSRNOT00000030365 ArrayExpress:D4AB53
Uniprot:D4AB53
Length = 528
Score = 235 (87.8 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 58/126 (46%), Positives = 77/126 (61%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 179 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 238
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 239 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 289
Query: 135 QSHQAA 140
Q+ AA
Sbjct: 290 QTMAAA 295
>UNIPROTKB|Q8WN55 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0051148 "negative regulation of muscle cell differentiation"
evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISS] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:AF445640 IPI:IPI00712263
RefSeq:NP_776867.1 UniGene:Bt.9031 ProteinModelPortal:Q8WN55
SMR:Q8WN55 PRIDE:Q8WN55 Ensembl:ENSBTAT00000066209 GeneID:282018
KEGG:bta:282018 CTD:5725 HOVERGEN:HBG069548 KO:K13218 OMA:SEECAQT
NextBio:20805882 ArrayExpress:Q8WN55 GO:GO:0051148 Uniprot:Q8WN55
Length = 531
Score = 235 (87.8 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 58/126 (46%), Positives = 77/126 (61%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 290
Query: 135 QSHQAA 140
Q+ AA
Sbjct: 291 QTMAAA 296
>UNIPROTKB|P26599 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IDA] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IDA] [GO:0036002 "pre-mRNA
binding" evidence=IDA] [GO:0033119 "negative regulation of RNA
splicing" evidence=IDA] [GO:0048025 "negative regulation of mRNA
splicing, via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0008187 "poly-pyrimidine
tract binding" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0000398 EMBL:CH471242
GO:GO:0048025 GO:GO:0000381 GO:GO:0008187 GO:GO:0036002
TIGRFAMs:TIGR01649 CTD:5725 HOVERGEN:HBG069548 KO:K13218
OMA:SEECAQT GO:GO:0051148 EMBL:X62006 EMBL:X65371 EMBL:X65372
EMBL:X60648 EMBL:X66975 EMBL:BT006819 EMBL:AC006273 EMBL:BC002397
EMBL:BC004383 EMBL:BC013694 IPI:IPI00179964 IPI:IPI00183626
IPI:IPI00334175 PIR:S23016 RefSeq:NP_002810.1 RefSeq:NP_114367.1
RefSeq:NP_114368.1 UniGene:Hs.172550 PDB:1QM9 PDB:1SJQ PDB:1SJR
PDB:2AD9 PDB:2ADB PDB:2ADC PDB:2EVZ PDB:3ZZY PDB:3ZZZ PDBsum:1QM9
PDBsum:1SJQ PDBsum:1SJR PDBsum:2AD9 PDBsum:2ADB PDBsum:2ADC
PDBsum:2EVZ PDBsum:3ZZY PDBsum:3ZZZ ProteinModelPortal:P26599
SMR:P26599 IntAct:P26599 MINT:MINT-1348690 STRING:P26599
PhosphoSite:P26599 DMDM:131528 SWISS-2DPAGE:P26599 PaxDb:P26599
PRIDE:P26599 DNASU:5725 Ensembl:ENST00000349038
Ensembl:ENST00000356948 Ensembl:ENST00000394601 GeneID:5725
KEGG:hsa:5725 UCSC:uc002lpq.2 UCSC:uc002lpr.2 GeneCards:GC19P000797
H-InvDB:HIX0137476 HGNC:HGNC:9583 HPA:CAB013507 MIM:600693
neXtProt:NX_P26599 PharmGKB:PA33934 eggNOG:NOG263741
HOGENOM:HOG000231699 ChEMBL:CHEMBL1293230 EvolutionaryTrace:P26599
GenomeRNAi:5725 NextBio:22252 PMAP-CutDB:P26599 ArrayExpress:P26599
Bgee:P26599 CleanEx:HS_PTBP1 Genevestigator:P26599
GermOnline:ENSG00000011304 Uniprot:P26599
Length = 531
Score = 235 (87.8 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 58/126 (46%), Positives = 77/126 (61%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 239
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D +PS + PS+
Sbjct: 240 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD--------LPSGDSQPSLD 290
Query: 135 QSHQAA 140
Q+ AA
Sbjct: 291 QTMAAA 296
>UNIPROTKB|F1P5K0 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
EMBL:AADN02066659 IPI:IPI00571435 Ensembl:ENSGALT00000003039
ArrayExpress:F1P5K0 Uniprot:F1P5K0
Length = 527
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 51/101 (50%), Positives = 66/101 (65%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 151 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKL 210
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D
Sbjct: 211 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD 250
>UNIPROTKB|E1BVR1 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0036002 "pre-mRNA binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:SEECAQT GO:GO:0051148
EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
EMBL:AADN02066659 IPI:IPI00684956 ProteinModelPortal:E1BVR1
Ensembl:ENSGALT00000003042 ArrayExpress:E1BVR1 Uniprot:E1BVR1
Length = 532
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 51/101 (50%), Positives = 66/101 (65%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 156 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKL 215
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
SL+G IY+ C L + +S+ T LNVK +DKSRDYT D
Sbjct: 216 SLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPD 255
>UNIPROTKB|B4DI28 [details] [associations]
symbol:PTBP2 "cDNA FLJ55578, highly similar to
Polypyrimidine tract-binding protein 2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
HOGENOM:HOG000231699 EMBL:AL357150 IPI:IPI00647067
UniGene:Hs.269895 UniGene:Hs.596061 HGNC:HGNC:17662 ChiTaRS:PTBP2
EMBL:AK295384 SMR:B4DI28 STRING:B4DI28 Ensembl:ENST00000541987
Uniprot:B4DI28
Length = 325
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 206 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 245
>RGD|621671 [details] [associations]
symbol:Ptbp3 "polypyrimidine tract binding protein 3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=IEA;ISO] [GO:0043249
"erythrocyte maturation" evidence=IEA] [GO:0045595 "regulation of
cell differentiation" evidence=IMP] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:621671 GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0033119
GO:GO:0043249 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ CTD:9991 OMA:PPSVTMD EMBL:AB023966
IPI:IPI00326775 RefSeq:NP_112636.1 UniGene:Rn.162818
ProteinModelPortal:Q9Z118 SMR:Q9Z118 STRING:Q9Z118 PRIDE:Q9Z118
Ensembl:ENSRNOT00000022107 GeneID:83515 KEGG:rno:83515
UCSC:RGD:621671 InParanoid:Q9Z118 NextBio:615974
Genevestigator:Q9Z118 GermOnline:ENSRNOG00000016334 Uniprot:Q9Z118
Length = 523
Score = 226 (84.6 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 62/166 (37%), Positives = 85/166 (51%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY D A AK
Sbjct: 149 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKM 208
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
+L+G IY+ C L + +S+ T LNVK +DKSRD+T D Q P A +
Sbjct: 209 ALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFG 267
Query: 135 QSHQAAPMYSGSE-YATAXXXXXXXXXXXSWNPSAQAGPAAYVSAS 179
+ Y+G+ +A A S P A GP S++
Sbjct: 268 APGIMSSPYAGAAGFAPAIAFPQAAGLSVSAVPGA-LGPLTLTSSA 312
>MGI|MGI:1923334 [details] [associations]
symbol:Ptbp3 "polypyrimidine tract binding protein 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=ISO] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0045595 "regulation of cell differentiation"
evidence=ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1923334
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043249 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ CTD:9991 EMBL:AK033732
EMBL:AK088560 EMBL:AL824704 EMBL:BC006638 EMBL:BC057641
IPI:IPI00221840 IPI:IPI00975110 RefSeq:NP_659153.2
RefSeq:NP_835458.1 UniGene:Mm.331640 ProteinModelPortal:Q8BHD7
SMR:Q8BHD7 STRING:Q8BHD7 PhosphoSite:Q8BHD7 PaxDb:Q8BHD7
PRIDE:Q8BHD7 Ensembl:ENSMUST00000030076 Ensembl:ENSMUST00000148331
Ensembl:ENSMUST00000172768 GeneID:230257 KEGG:mmu:230257
UCSC:uc008szw.2 UCSC:uc008szx.2 InParanoid:A2ANH0 ChiTaRS:PTBP3
NextBio:379861 Bgee:Q8BHD7 CleanEx:MM_ROD1 Genevestigator:Q8BHD7
GermOnline:ENSMUSG00000028382 Uniprot:Q8BHD7
Length = 523
Score = 225 (84.3 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 73/207 (35%), Positives = 95/207 (45%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY D A AK
Sbjct: 149 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKM 208
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
+L+G IY+ C L + +S+ T LNVK +DKSRD+T D Q P A +
Sbjct: 209 ALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAF- 266
Query: 135 QSHQAAPMYSGSEYATAXXXXXXXXXXXSWNPSAQAGPAAYVSASGPFPGQTYPQSPVFA 194
AP S YA A + S A P A GP + S A
Sbjct: 267 ----GAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL----GPLTLTSSAVSGRMA 318
Query: 195 YATAPTPTGSSPLSLTQPGVPPVRPGG 221
A G+S L +T + P G
Sbjct: 319 IPGASGMPGNSVLLVTNLNPDFITPHG 345
>ZFIN|ZDB-GENE-050320-141 [details] [associations]
symbol:ptbp2a "polypyrimidine tract binding protein
2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050320-141
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
EMBL:CU896585 IPI:IPI00996240 Ensembl:ENSDART00000123275
Bgee:F1QG05 Uniprot:F1QG05
Length = 512
Score = 224 (83.9 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 50/97 (51%), Positives = 62/97 (63%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
S VL I+NM Y VT+DVL +FS FGTV K+ F KN QAL+QY D A AK +
Sbjct: 164 SPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPACAQQAKVA 223
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L+G IY+ C L + YS+ +LNVK +DKSRDYT
Sbjct: 224 LDGQNIYNA-CCTLRIDYSKLVNLNVKYNNDKSRDYT 259
>UNIPROTKB|F1S549 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP085536 EMBL:CU137694
Ensembl:ENSSSCT00000007533 Uniprot:F1S549
Length = 401
Score = 220 (82.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 33 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 92
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 93 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 132
>UNIPROTKB|I3LP39 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP085536 EMBL:CU137694
Ensembl:ENSSSCT00000024275 Uniprot:I3LP39
Length = 405
Score = 220 (82.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 33 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 92
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 93 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 132
>UNIPROTKB|I3LDE4 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:QSQLAMS EMBL:FP085536 EMBL:CU137694 Ensembl:ENSSSCT00000022271
Uniprot:I3LDE4
Length = 411
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 34 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 93
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 94 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 133
>ZFIN|ZDB-GENE-091116-1 [details] [associations]
symbol:ptbp3 "polypyrimidine tract binding protein 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-091116-1 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:9991
OMA:PPSVTMD EMBL:BX510369 EMBL:CR931761 IPI:IPI00493597
RefSeq:XP_001335967.1 UniGene:Dr.40305 Ensembl:ENSDART00000040308
Ensembl:ENSDART00000146727 GeneID:798982 KEGG:dre:798982
NextBio:20933630 Uniprot:E7FB37
Length = 522
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/108 (46%), Positives = 68/108 (62%)
Query: 8 DGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDIT 67
DG +S VL +EN+ Y V+++VL+ +FS FGTV K+ F KN QAL+QY D
Sbjct: 142 DGGMMPGQSPVLRIIVENLYYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPM 201
Query: 68 TAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
A AK +L+G IY+G C L + +S+ T LNVK +DKSRD+T D
Sbjct: 202 NAHHAKVALDGQNIYNG-CCTLRVEFSKLTSLNVKYNNDKSRDFTRLD 248
>FB|FBgn0011224 [details] [associations]
symbol:heph "hephaestus" species:7227 "Drosophila
melanogaster" [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008187 "poly-pyrimidine tract binding" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0007219 "Notch
signaling pathway" evidence=IMP] [GO:0008586 "imaginal disc-derived
wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal
disc-derived wing margin morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0007319 "negative regulation of oskar mRNA
translation" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0008103 GO:GO:0000166 GO:GO:0008586
Gene3D:3.30.70.330 GO:GO:0007291 GO:GO:0003730 GO:GO:0030529
GO:GO:0000398 GO:GO:0000900 GO:GO:0008587 GO:GO:0007319
GO:GO:0008187 CTD:9843 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 KO:K14948 UniGene:Dm.19417
GeneID:48571 KEGG:dme:Dmel_CG31000 FlyBase:FBgn0011224 ChiTaRS:HEPH
GenomeRNAi:48571 NextBio:839481 HSSP:P26599 EMBL:AY052367
EMBL:BT030984 RefSeq:NP_001163787.1 RefSeq:NP_001163790.1
RefSeq:NP_788780.1 SMR:Q95UI6 STRING:Q95UI6
EnsemblMetazoa:FBtr0085881 EnsemblMetazoa:FBtr0300263
EnsemblMetazoa:FBtr0300266 UCSC:CG31000-RH InParanoid:Q95UI6
Uniprot:Q95UI6
Length = 789
Score = 213 (80.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 44/97 (45%), Positives = 62/97 (63%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VL +E++ Y V++D+L+ +F +G V K+ F KN QALIQYPD +A AK
Sbjct: 403 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 462
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L+G IY+G C L + S+ T LNVK +DKSRD+T
Sbjct: 463 LDGQNIYNG-CCTLRIDNSKLTALNVKYNNDKSRDFT 498
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 210 TQPGVPPVRPG 220
T P +PP PG
Sbjct: 498 TNPALPPGEPG 508
>TAIR|locus:2018630 [details] [associations]
symbol:PTB3 "polypyrimidine tract-binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006417 "regulation of translation" evidence=IEP] [GO:0043484
"regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006417 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0000932 EMBL:AC005687 KO:K14948
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BT014899 EMBL:BT015028
IPI:IPI00544143 RefSeq:NP_001077672.1 RefSeq:NP_175010.2
UniGene:At.22472 ProteinModelPortal:Q6ICX4 SMR:Q6ICX4 STRING:Q6ICX4
PaxDb:Q6ICX4 PRIDE:Q6ICX4 EnsemblPlants:AT1G43190.1
EnsemblPlants:AT1G43190.2 GeneID:840918 KEGG:ath:AT1G43190
GeneFarm:5076 TAIR:At1g43190 InParanoid:Q6ICX4 OMA:IKMHNHK
PhylomeDB:Q6ICX4 ProtClustDB:CLSN2690441 Genevestigator:Q6ICX4
GermOnline:AT1G43190 Uniprot:Q6ICX4
Length = 432
Score = 218 (81.8 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 48/102 (47%), Positives = 68/102 (66%)
Query: 12 KELESN-VLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAA 70
+E E N +LL +I +M Y +TVDVL+ VFS +G V+K+ F+K+ G QALIQY AA
Sbjct: 93 REDEPNRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAA 152
Query: 71 VAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
A+ +L+G IYDG C+L + +S +L V +D+SRDYT
Sbjct: 153 SARTALQGRNIYDG-CCQLDIQFSNLEELQVNYNNDRSRDYT 193
>UNIPROTKB|F1PXP9 [details] [associations]
symbol:PTBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 OMA:PPSVTMD
EMBL:AAEX03008069 EMBL:AAEX03008070 Ensembl:ENSCAFT00000004839
Uniprot:F1PXP9
Length = 521
Score = 220 (82.5 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 49/101 (48%), Positives = 65/101 (64%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY D A AK
Sbjct: 147 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 206
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ T LNVK +DKSRD+T D
Sbjct: 207 ALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 246
>UNIPROTKB|F1MPG6 [details] [associations]
symbol:F1MPG6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0033119 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:PPSVTMD EMBL:DAAA02024547 IPI:IPI00700660
Ensembl:ENSBTAT00000022272 Uniprot:F1MPG6
Length = 523
Score = 220 (82.5 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 72/207 (34%), Positives = 95/207 (45%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL IEN+ Y VT++VL+ +FS FGTV K+ F KN QAL+QY D A AK
Sbjct: 147 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKM 206
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
+L+G IY+ C L + +S+ T LNVK +DKSRD+T D Q P A +
Sbjct: 207 ALDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAF- 264
Query: 135 QSHQAAPMYSGSEYATAXXXXXXXXXXXSWNPSAQAGPAAYVSASGPFPGQTYPQSPVFA 194
AP S YA A + S AG A GP + + A
Sbjct: 265 ----GAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGP--GALGPLAITSSAVTGRMA 318
Query: 195 YATAPTPTGSSPLSLTQPGVPPVRPGG 221
A G+S L +T + P G
Sbjct: 319 IPGAGGMPGNSVLLVTNLNPDLITPHG 345
>UNIPROTKB|Q9UKA9 [details] [associations]
symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649 KO:K14948
HOVERGEN:HBG069548 eggNOG:NOG263741 EMBL:AF176085 EMBL:AB051232
EMBL:AB051233 EMBL:AF530580 EMBL:AF530581 EMBL:AF530582
EMBL:AF530583 EMBL:BK000526 EMBL:AL357150 EMBL:BC016582
IPI:IPI00254162 IPI:IPI00514064 IPI:IPI00641664 IPI:IPI00647067
IPI:IPI00743676 IPI:IPI00748295 RefSeq:NP_067013.1
UniGene:Hs.269895 UniGene:Hs.596061 PDB:2CQ1 PDBsum:2CQ1
ProteinModelPortal:Q9UKA9 SMR:Q9UKA9 IntAct:Q9UKA9
MINT:MINT-1483252 STRING:Q9UKA9 PhosphoSite:Q9UKA9 DMDM:74761983
REPRODUCTION-2DPAGE:IPI00647067 PaxDb:Q9UKA9 PRIDE:Q9UKA9
DNASU:58155 Ensembl:ENST00000236228 Ensembl:ENST00000370197
Ensembl:ENST00000370198 Ensembl:ENST00000426398 GeneID:58155
KEGG:hsa:58155 UCSC:uc001drn.2 UCSC:uc001dro.2 UCSC:uc001drq.3
UCSC:uc001drr.3 CTD:58155 GeneCards:GC01P097187 HGNC:HGNC:17662
HPA:HPA047420 MIM:608449 neXtProt:NX_Q9UKA9 PharmGKB:PA33935
OrthoDB:EOG473PSG ChiTaRS:PTBP2 EvolutionaryTrace:Q9UKA9
GenomeRNAi:58155 NextBio:64859 ArrayExpress:Q9UKA9 Bgee:Q9UKA9
CleanEx:HS_PTBP2 Genevestigator:Q9UKA9 GermOnline:ENSG00000117569
Uniprot:Q9UKA9
Length = 531
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 237 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 276
>MGI|MGI:1860489 [details] [associations]
symbol:Ptbp2 "polypyrimidine tract binding protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IDA] [GO:0006376 "mRNA splice site selection"
evidence=IMP;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=ISO] [GO:2000177 "regulation
of neural precursor cell proliferation" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1860489 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
GO:GO:2000177 KO:K14948 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG ChiTaRS:PTBP2
EMBL:AF095718 EMBL:AK013734 EMBL:AK137348 EMBL:BC010255
EMBL:AY333752 EMBL:BK000527 IPI:IPI00136002 IPI:IPI00751759
RefSeq:NP_062423.1 UniGene:Mm.29966 ProteinModelPortal:Q91Z31
SMR:Q91Z31 IntAct:Q91Z31 STRING:Q91Z31 PhosphoSite:Q91Z31
PaxDb:Q91Z31 PRIDE:Q91Z31 Ensembl:ENSMUST00000029780 GeneID:56195
KEGG:mmu:56195 UCSC:uc008rdi.1 UCSC:uc008rdk.2 InParanoid:Q91Z31
OMA:QSQLAMS NextBio:312010 Bgee:Q91Z31 CleanEx:MM_PTBP2
Genevestigator:Q91Z31 GermOnline:ENSMUSG00000028134 Uniprot:Q91Z31
Length = 531
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 237 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 276
>RGD|1359267 [details] [associations]
symbol:Ptbp2 "polypyrimidine tract binding protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=IEA;ISO] [GO:0006376
"mRNA splice site selection" evidence=IEA;ISO] [GO:0033119
"negative regulation of RNA splicing" evidence=IEA;ISO] [GO:2000177
"regulation of neural precursor cell proliferation"
evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1359267
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 KO:K14948 HOVERGEN:HBG069548
eggNOG:NOG263741 HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG
EMBL:AJ010585 EMBL:BC082076 EMBL:AY333750 IPI:IPI00471764
IPI:IPI00758469 RefSeq:NP_001005555.1 UniGene:Rn.64916
ProteinModelPortal:Q66H20 SMR:Q66H20 STRING:Q66H20 PRIDE:Q66H20
Ensembl:ENSRNOT00000015036 GeneID:310820 KEGG:rno:310820
UCSC:RGD:1359267 InParanoid:Q66H20 NextBio:662705
Genevestigator:Q66H20 GermOnline:ENSRNOG00000010827 Uniprot:Q66H20
Length = 531
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 237 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 276
>UNIPROTKB|F1NRD6 [details] [associations]
symbol:PTBP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006376 "mRNA splice site selection"
evidence=IEA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:QSQLAMS EMBL:AADN02012892 IPI:IPI00602746
Ensembl:ENSGALT00000008906 ArrayExpress:F1NRD6 Uniprot:F1NRD6
Length = 532
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 237 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 276
>UNIPROTKB|E2RSK4 [details] [associations]
symbol:PTBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QSQLAMS EMBL:AAEX03004787
EMBL:AAEX03004788 EMBL:AAEX03004789 EMBL:AAEX03004790
ProteinModelPortal:E2RSK4 PRIDE:E2RSK4 Ensembl:ENSCAFT00000031985
Uniprot:E2RSK4
Length = 532
Score = 220 (82.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 237 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 276
>UNIPROTKB|B4DSS8 [details] [associations]
symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
HOVERGEN:HBG069548 HOGENOM:HOG000231699 EMBL:AL357150
IPI:IPI00254162 UniGene:Hs.269895 UniGene:Hs.596061 HGNC:HGNC:17662
ChiTaRS:PTBP2 OMA:QSQLAMS EMBL:AK299897 SMR:B4DSS8 STRING:B4DSS8
Ensembl:ENST00000394184 UCSC:uc010otz.1 Uniprot:B4DSS8
Length = 548
Score = 220 (82.5 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
+L+G IY+ C L + +S+ +LNVK +DKSRDYT D
Sbjct: 248 ALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPD 287
>DICTYBASE|DDB_G0278105 [details] [associations]
symbol:DDB_G0278105 "heterogeneous nuclear
ribonucleoprotein L-like protein" species:44689 "Dictyostelium
discoideum" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0278105
GO:GO:0005634 GO:GO:0000166 EMBL:AAFI02000023 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG326285 KO:K13159
TIGRFAMs:TIGR01649 RefSeq:XP_642125.1 ProteinModelPortal:Q54YS7
EnsemblProtists:DDB0233648 GeneID:8621334 KEGG:ddi:DDB_G0278105
InParanoid:Q54YS7 OMA:VIRIVIF ProtClustDB:CLSZ2846835
Uniprot:Q54YS7
Length = 530
Score = 219 (82.2 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 55/179 (30%), Positives = 89/179 (49%)
Query: 17 NVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKESL 76
N++L +I N Y +T + ++ + S +G V ++ IF+K G Q +++ +A AKESL
Sbjct: 135 NIILCTILNPIYPITTNTIHNIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESL 194
Query: 77 EGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVWQS 136
G IY+GG CKL + ++R + LNVK DK+ DYT + + QQ+ S+ +P +
Sbjct: 195 NGQDIYNGG-CKLQIEFARVSKLNVKQNDDKTADYTAEFYQMQQQQQMASL-GSPYAMPT 252
Query: 137 HQAAPMYSGSEYATAXXXXXXXXXXXSWNPSAQAGPAAYVSASGPFPGQTYPQSPVFAY 195
Q PM G+ ++T S S G + G Y QS + +Y
Sbjct: 253 -QGGPM--GNPFSTVPHHHGSMGHHHSPFTSVVGGGGGGGAPMGIDKSMMYSQSAMSSY 308
>UNIPROTKB|E1C5J2 [details] [associations]
symbol:E1C5J2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:AADN02057711 EMBL:AADN02057712
EMBL:AADN02057713 IPI:IPI00822931 Ensembl:ENSGALT00000037624
ArrayExpress:E1C5J2 Uniprot:E1C5J2
Length = 288
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
S+VL IEN+ Y V+++VL +FS FG V K+ F +N QALIQY + A AK +
Sbjct: 162 SSVLRIIIENLFYPVSLEVLYQIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMA 221
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPA 129
L G IY+ C LH+ +S+ T L VK ++KSRD+T D A Q+P PA
Sbjct: 222 LNGRNIYNA-CCTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPA-ADGQLPLDPA 273
>UNIPROTKB|F1ND44 [details] [associations]
symbol:F1ND44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0033119 "negative regulation of RNA splicing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0033119
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 EMBL:AADN02057711
EMBL:AADN02057712 EMBL:AADN02057713 IPI:IPI00604250
Ensembl:ENSGALT00000025267 OMA:FLEMASI ArrayExpress:F1ND44
Uniprot:F1ND44
Length = 364
Score = 206 (77.6 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
S+VL IEN+ Y V+++VL +FS FG V K+ F +N QALIQY + A AK +
Sbjct: 178 SSVLRIIIENLFYPVSLEVLYQIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMA 237
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPA 129
L G IY+ C LH+ +S+ T L VK ++KSRD+T D A Q+P PA
Sbjct: 238 LNGRNIYNA-CCTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPA-ADGQLPLDPA 289
>RGD|727953 [details] [associations]
symbol:Smptb "polypyrimidine tract-binding protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:727953
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000380 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ HSSP:P26599 EMBL:CH474078 EMBL:AY223520
IPI:IPI00331913 RefSeq:NP_877970.1 UniGene:Rn.97598 SMR:Q80XZ1
Ensembl:ENSRNOT00000014611 GeneID:302879 KEGG:rno:302879
UCSC:RGD:727953 CTD:302879 NextBio:650282 Genevestigator:Q80XZ1
Uniprot:Q80XZ1
Length = 588
Score = 211 (79.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 56/136 (41%), Positives = 76/136 (55%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL +EN Y VT++VL+ +FS FGTV K+ KN QAL+QY + +A AK
Sbjct: 186 QSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKL 245
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
L+G IYD C L +S+S T+L VK +DKSRDY D L + PS ++
Sbjct: 246 FLDGQNIYDA-CCTLRISFSGLTNLMVKYNNDKSRDYMRPD--LPSDDSQPSPVQVQNMA 302
Query: 135 QSHQAAPMYSGSEYAT 150
+ A M S S YA+
Sbjct: 303 SALPAPAMSSASPYAS 318
>WB|WBGene00004207 [details] [associations]
symbol:ptb-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000398 EMBL:Z36948 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 eggNOG:NOG263741 HOGENOM:HOG000231699
OMA:IKMHNHK PIR:A88299 PIR:T20381 RefSeq:NP_741041.1 HSSP:P26599
ProteinModelPortal:Q18999 SMR:Q18999 DIP:DIP-24857N IntAct:Q18999
MINT:MINT-1089938 STRING:Q18999 PaxDb:Q18999 PRIDE:Q18999
EnsemblMetazoa:D2089.4a GeneID:174647 KEGG:cel:CELE_D2089.4
UCSC:D2089.4a CTD:174647 WormBase:D2089.4a InParanoid:Q18999
NextBio:884900 ArrayExpress:Q18999 Uniprot:Q18999
Length = 615
Score = 204 (76.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 42/97 (43%), Positives = 63/97 (64%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VL IENM + V++DVL +F+ +G V ++ F KN QAL+Q + +A +AK+
Sbjct: 229 NSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQG 288
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
LE +Y+G C L + YS+ + LNVK +DKSRDYT
Sbjct: 289 LENQNVYNG-CCTLRIDYSKLSTLNVKYNNDKSRDYT 324
>UNIPROTKB|H7BXH8 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC011247 HGNC:HGNC:25127 TIGRFAMs:TIGR01649
ProteinModelPortal:H7BXH8 PRIDE:H7BXH8 Ensembl:ENST00000272249
Uniprot:H7BXH8
Length = 217
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++++ + A AK +
Sbjct: 101 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAA 159
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 160 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 195
>UNIPROTKB|F1M040 [details] [associations]
symbol:F1M040 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 IPI:IPI00952207
Ensembl:ENSRNOT00000006710 ArrayExpress:F1M040 Uniprot:F1M040
Length = 488
Score = 176 (67.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 39/105 (37%), Positives = 63/105 (60%)
Query: 8 DGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDIT 67
D + + ++VLL +I N Y++T DVL T+ + G +Q+ IF +NG QA++++ +
Sbjct: 92 DSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQRTVIFRENG-VQAMVEFDSVQ 150
Query: 68 TAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
+A AK SL+G IY G C L + Y++ T LNV + + DYT
Sbjct: 151 SAQSAKASLDGADIYSG-CCTLTIEYAKPTRLNVSKNNQDTWDYT 194
Score = 41 (19.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 216 PVRPGGASPPGHPPYY 231
P R G SPP PP Y
Sbjct: 261 PSRYGPYSPPPPPPDY 276
>UNIPROTKB|C9IYN3 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC011247 IPI:IPI00554613 HGNC:HGNC:25127 TIGRFAMs:TIGR01649
ProteinModelPortal:C9IYN3 SMR:C9IYN3 STRING:C9IYN3
Ensembl:ENST00000358367 HOGENOM:HOG000168824 ArrayExpress:C9IYN3
Bgee:C9IYN3 Uniprot:C9IYN3
Length = 282
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++ + + A AK +
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMLMFESVLCAQKAKAA 224
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 260
>UNIPROTKB|F1P0T4 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0033120
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 OMA:QIRIPNG
EMBL:AADN02041246 EMBL:AADN02041247 EMBL:AADN02041248
IPI:IPI00579162 Ensembl:ENSGALT00000013852 Uniprot:F1P0T4
Length = 473
Score = 191 (72.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA+++Y + A AK +
Sbjct: 97 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEYQSVFCAQKAKAA 155
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 156 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 191
>DICTYBASE|DDB_G0284321 [details] [associations]
symbol:DDB_G0284321 "putative polypyrimidine tract
binding protein (PTBP1)" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0284321 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000064 eggNOG:NOG263741 OMA:DATENEI
RefSeq:XP_638677.1 ProteinModelPortal:Q54PW8 SMR:Q54PW8
EnsemblProtists:DDB0233645 GeneID:8624506 KEGG:ddi:DDB_G0284321
InParanoid:Q54PW8 Uniprot:Q54PW8
Length = 892
Score = 194 (73.4 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 12 KELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAV 71
KE + +LL +I N Y +T+D L VFS +GT+ K+ +F K+G Q+LI+ A
Sbjct: 394 KETPNCILLVTISNYFYNITIDELFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATK 453
Query: 72 AKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLL-ATQQI------ 124
AK L+G I + C L + YS T L +K ++KSRD+TV D L+ T +
Sbjct: 454 AKNVLDGVNINNS--CSLKIQYSSLTSLKIKYNNEKSRDFTVMDHHLIDPTTGLTPPGLL 511
Query: 125 -PSVPAAPSVWQSHQAAP 141
P +P + SV +S +P
Sbjct: 512 TPPIPGSSSVQRSTYVSP 529
>UNIPROTKB|Q8WVV9 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0033120 "positive
regulation of RNA splicing" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0030529
GO:GO:0033120 EMBL:AY236963 EMBL:AF461722 EMBL:AF461712
EMBL:AF461713 EMBL:AF461715 EMBL:AF461717 EMBL:AF461719
EMBL:AF461721 EMBL:AF461720 EMBL:AF461718 EMBL:AF461716
EMBL:AF461714 EMBL:AK291462 EMBL:AC011247 EMBL:BC008217
EMBL:BC017480 EMBL:AL512692 IPI:IPI00103247 IPI:IPI00470410
IPI:IPI00479814 IPI:IPI00554613 RefSeq:NP_001136122.1
RefSeq:NP_612403.2 UniGene:Hs.445497 ProteinModelPortal:Q8WVV9
SMR:Q8WVV9 IntAct:Q8WVV9 MINT:MINT-1033123 STRING:Q8WVV9
PhosphoSite:Q8WVV9 DMDM:62286941 PaxDb:Q8WVV9 PRIDE:Q8WVV9
Ensembl:ENST00000409636 Ensembl:ENST00000410076 GeneID:92906
KEGG:hsa:92906 UCSC:uc021vgb.1 UCSC:uc021vgc.1 CTD:92906
GeneCards:GC02M038789 HGNC:HGNC:25127 HPA:HPA046084 MIM:611208
neXtProt:NX_Q8WVV9 PharmGKB:PA134987080 eggNOG:NOG326285
HOVERGEN:HBG105786 InParanoid:Q8WVV9 KO:K13159 OrthoDB:EOG49S662
GenomeRNAi:92906 NextBio:77908 ArrayExpress:Q8WVV9 Bgee:Q8WVV9
CleanEx:HS_HNRPLL Genevestigator:Q8WVV9 GermOnline:ENSG00000143889
TIGRFAMs:TIGR01649 Uniprot:Q8WVV9
Length = 542
Score = 188 (71.2 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++++ + A AK +
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAA 224
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 260
>MGI|MGI:1919942 [details] [associations]
symbol:Hnrpll "heterogeneous nuclear ribonucleoprotein
L-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0033120 "positive
regulation of RNA splicing" evidence=ISO] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1919942 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0033120
CTD:92906 eggNOG:NOG326285 HOVERGEN:HBG105786 KO:K13159
OrthoDB:EOG49S662 TIGRFAMs:TIGR01649 EMBL:AK034860 EMBL:AK146879
EMBL:BC004763 EMBL:BC012849 EMBL:BC071184 IPI:IPI00121760
IPI:IPI00463538 IPI:IPI00555009 RefSeq:NP_659051.3 UniGene:Mm.64579
PDB:1WEX PDB:2E5I PDBsum:1WEX PDBsum:2E5I ProteinModelPortal:Q921F4
SMR:Q921F4 STRING:Q921F4 PhosphoSite:Q921F4 PaxDb:Q921F4
PRIDE:Q921F4 Ensembl:ENSMUST00000061331 GeneID:72692 KEGG:mmu:72692
UCSC:uc008dqk.1 GeneTree:ENSGT00550000074508 HOGENOM:HOG000293298
InParanoid:Q921F4 OMA:QIRIPNG EvolutionaryTrace:Q921F4
NextBio:336749 Bgee:Q921F4 CleanEx:MM_HNRPLL Genevestigator:Q921F4
GermOnline:ENSMUSG00000024095 Uniprot:Q921F4
Length = 591
Score = 188 (71.2 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++++ + A AK +
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAA 273
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 309
>RGD|1305861 [details] [associations]
symbol:Hnrpll "heterogeneous nuclear ribonucleoprotein L-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1305861
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 CTD:92906 KO:K13159
OrthoDB:EOG49S662 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
IPI:IPI00360055 RefSeq:XP_001063027.2 RefSeq:XP_233805.5
PRIDE:D4A3E1 Ensembl:ENSRNOT00000009175 GeneID:313842
KEGG:rno:313842 UCSC:RGD:1305861 NextBio:666896 Uniprot:D4A3E1
Length = 591
Score = 188 (71.2 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++++ + A AK +
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAA 273
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 309
>UNIPROTKB|I3L8B8 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
Ensembl:ENSSSCT00000030162 Uniprot:I3L8B8
Length = 488
Score = 185 (70.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 45/101 (44%), Positives = 61/101 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYP----DITTAAV 71
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA+++YP + A
Sbjct: 97 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEYPLFFKSVLCAQK 155
Query: 72 AKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
AK +L G IY G C L + Y+R T LNV + S DYT
Sbjct: 156 AKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 195
>UNIPROTKB|I3LG16 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG Ensembl:ENSSSCT00000024049
Uniprot:I3LG16
Length = 537
Score = 185 (70.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/101 (44%), Positives = 61/101 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYP----DITTAAV 71
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA+++YP + A
Sbjct: 157 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEYPLFFKSVLCAQK 215
Query: 72 AKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
AK +L G IY G C L + Y+R T LNV + S DYT
Sbjct: 216 AKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 255
>UNIPROTKB|F1N7G0 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG EMBL:DAAA02030598
IPI:IPI00709568 Ensembl:ENSBTAT00000027405 Uniprot:F1N7G0
Length = 541
Score = 185 (70.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++ + + A AK +
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMLMFESVLCAQKAKAA 223
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 259
>UNIPROTKB|D6W592 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CH471053
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:AC011247 IPI:IPI00103247 UniGene:Hs.445497
HGNC:HGNC:25127 TIGRFAMs:TIGR01649 OMA:QIRIPNG
ProteinModelPortal:D6W592 SMR:D6W592 PRIDE:D6W592
Ensembl:ENST00000449105 PhylomeDB:D6W592 ArrayExpress:D6W592
Bgee:D6W592 Uniprot:D6W592
Length = 542
Score = 185 (70.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++ + + A AK +
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMLMFESVLCAQKAKAA 224
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 260
>UNIPROTKB|J9P3Y8 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG EMBL:AAEX03010867
Ensembl:ENSCAFT00000049490 Uniprot:J9P3Y8
Length = 545
Score = 185 (70.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++ + + A AK +
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMLMFESVLCAQKAKAA 227
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y+R T LNV + S DYT
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT 263
>ZFIN|ZDB-GENE-040426-2707 [details] [associations]
symbol:hnrnpl2 "heterogeneous nuclear
ribonucleoprotein L2" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2707 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG326285
HOVERGEN:HBG105786 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 EMBL:BX088654 EMBL:BC154328 IPI:IPI00617335
UniGene:Dr.32199 SMR:A8KC22 STRING:A8KC22
Ensembl:ENSDART00000142334 Uniprot:A8KC22
Length = 522
Score = 182 (69.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 61/195 (31%), Positives = 86/195 (44%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+NVLL +I N Y +T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 190
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLLATQQIPSVP----AAP 131
L G IY G C L + Y++ T LNV + DYT L TQ + + P P
Sbjct: 191 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT---NPSLGTQDMNANPNKRQRQP 246
Query: 132 SVWQSHQAA----PMYSGSEYATAXXXXXXXXXXXSWNPSAQAGPAAYVSASGPFPGQ-- 185
++ H P Y Y ++Q A Y P PG+
Sbjct: 247 ALLGDHPPEYGGYPGYPDESYGYEGRRMGPPMSAPRRGGASQRYSAQYGGPPPPPPGEYG 306
Query: 186 TYPQSPVF-AYATAP 199
+ SPV Y P
Sbjct: 307 AHADSPVIMVYGLDP 321
>ZFIN|ZDB-GENE-040426-710 [details] [associations]
symbol:hnrpl "heterogeneous nuclear
ribonucleoprotein L" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-710 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BX547938 HOVERGEN:HBG105786
KO:K13159 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 OMA:RPTSVKV OrthoDB:EOG4RFKSD EMBL:BC045336
IPI:IPI00502192 RefSeq:NP_957393.1 UniGene:Dr.76170 SMR:Q7ZW09
STRING:Q7ZW09 Ensembl:ENSDART00000051184 GeneID:394074
KEGG:dre:394074 CTD:394074 InParanoid:Q7ZW09 NextBio:20815031
Uniprot:Q7ZW09
Length = 536
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/97 (42%), Positives = 58/97 (59%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+NVLL +I N Y +T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 131 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 189
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 190 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 225
>UNIPROTKB|F1LZ79 [details] [associations]
symbol:F1LZ79 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
IPI:IPI00561021 Ensembl:ENSRNOT00000006719 ArrayExpress:F1LZ79
Uniprot:F1LZ79
Length = 485
Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 39/105 (37%), Positives = 63/105 (60%)
Query: 8 DGKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDIT 67
D + + ++VLL +I N Y++T DVL T+ + G +Q+ IF +NG QA++++ +
Sbjct: 92 DSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQRTVIFRENG-VQAMVEFDSVQ 150
Query: 68 TAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
+A AK SL+G IY G C L + Y++ T LNV + + DYT
Sbjct: 151 SAQSAKASLDGADIYSG-CCTLTIEYAKPTRLNVSKNNQDTWDYT 194
>FB|FBgn0003435 [details] [associations]
symbol:sm "smooth" species:7227 "Drosophila melanogaster"
[GO:0030529 "ribonucleoprotein complex" evidence=NAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008343 "adult
feeding behavior" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE013599 GO:GO:0007411
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0008343
KO:K13159 GeneTree:ENSGT00550000074508 UniGene:Dm.7773 GeneID:37254
KEGG:dme:Dmel_CG9218 CTD:37254 FlyBase:FBgn0003435 ChiTaRS:sm
GenomeRNAi:37254 NextBio:802755 EMBL:BT011352 RefSeq:NP_001027439.2
SMR:Q6NND8 STRING:Q6NND8 EnsemblMetazoa:FBtr0301609 Uniprot:Q6NND8
Length = 480
Score = 174 (66.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/136 (36%), Positives = 75/136 (55%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
+++LL +I N Y +TVDVL+ + G V ++ IF+KNG QA++++ ++ A A+E+
Sbjct: 80 NHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRAREN 138
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNV-KAYSDKSRDYTVQDQTLLATQQIPSVPAAPSVW 134
L G IY G C L + Y++ LNV K D S DYT L+T +I +P P +
Sbjct: 139 LNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYT------LSTGEI--LPKPPLLG 189
Query: 135 QSHQAAPMYSGSEYAT 150
A P + EY T
Sbjct: 190 PG-AAFPPFGAPEYHT 204
>MGI|MGI:104816 [details] [associations]
symbol:Hnrnpl "heterogeneous nuclear ribonucleoprotein L"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045120 "pronucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:104816 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0044212 GO:GO:0030529 GO:GO:0045120
eggNOG:NOG326285 HOVERGEN:HBG105786 KO:K13159 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOGENOM:HOG000293298 CTD:3191
OrthoDB:EOG4RFKSD ChiTaRS:HNRNPL EMBL:BC027206 EMBL:BC030461
EMBL:BC099683 EMBL:AB009392 IPI:IPI00620362 RefSeq:NP_796275.3
UniGene:Mm.9043 PDB:3S01 PDB:3TYT PDBsum:3S01 PDBsum:3TYT
ProteinModelPortal:Q8R081 SMR:Q8R081 IntAct:Q8R081 STRING:Q8R081
PhosphoSite:Q8R081 REPRODUCTION-2DPAGE:Q8R081 PaxDb:Q8R081
PRIDE:Q8R081 Ensembl:ENSMUST00000038572 Ensembl:ENSMUST00000174548
GeneID:15388 KEGG:mmu:15388 UCSC:uc009fzz.2 NextBio:288066
Bgee:Q8R081 CleanEx:MM_HNRNPL Genevestigator:Q8R081
GermOnline:ENSMUSG00000015165 Uniprot:Q8R081
Length = 586
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 189 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 247
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 248 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 283
>UNIPROTKB|F2Z3R2 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:3191
UniGene:Rn.33873 GeneID:80846 KEGG:rno:80846 NextBio:614884
IPI:IPI00364061 RefSeq:NP_116008.2 ProteinModelPortal:F2Z3R2
SMR:F2Z3R2 PRIDE:F2Z3R2 Ensembl:ENSRNOT00000027494 Uniprot:F2Z3R2
Length = 586
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 189 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 247
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 248 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 283
>UNIPROTKB|E1BIB4 [details] [associations]
symbol:HNRNPL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0044212 GO:GO:0045120 KO:K13159 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 CTD:3191 OMA:RPTSVKV EMBL:DAAA02047038
IPI:IPI00697891 RefSeq:NP_001178959.1 UniGene:Bt.21801 PRIDE:E1BIB4
Ensembl:ENSBTAT00000032051 GeneID:504520 KEGG:bta:504520
NextBio:20866705 Uniprot:E1BIB4
Length = 588
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 191 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 249
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 250 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 285
>UNIPROTKB|E2R944 [details] [associations]
symbol:HNRNPL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0044212
GO:GO:0045120 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:RPTSVKV EMBL:AAEX03000969 Ensembl:ENSCAFT00000009103
Uniprot:E2R944
Length = 588
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 191 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 249
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 250 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 285
>UNIPROTKB|P14866 [details] [associations]
symbol:HNRNPL "Heterogeneous nuclear ribonucleoprotein L"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675
Gene3D:3.30.70.330 EMBL:CH471126 GO:GO:0003723 GO:GO:0044212
GO:GO:0030529 GO:GO:0000398 GO:GO:0045120 eggNOG:NOG326285
HOVERGEN:HBG105786 KO:K13159 TIGRFAMs:TIGR01649
HOGENOM:HOG000293298 EMBL:AB044547 EMBL:AK292115 EMBL:AC008982
EMBL:X16135 IPI:IPI00027834 PIR:A33616 RefSeq:NP_001005335.1
RefSeq:NP_001524.2 UniGene:Hs.644906 PDB:3R27 PDB:3TO8 PDBsum:3R27
PDBsum:3TO8 ProteinModelPortal:P14866 SMR:P14866 IntAct:P14866
MINT:MINT-1422378 STRING:P14866 PhosphoSite:P14866 DMDM:215274006
REPRODUCTION-2DPAGE:IPI00027834 SWISS-2DPAGE:P14866 PaxDb:P14866
PRIDE:P14866 DNASU:3191 Ensembl:ENST00000221419
Ensembl:ENST00000388749 Ensembl:ENST00000388750 GeneID:3191
KEGG:hsa:3191 UCSC:uc021uuh.1 CTD:3191 GeneCards:GC19M039327
H-InvDB:HIX0174642 HGNC:HGNC:5045 HPA:CAB016326 MIM:164021
MIM:603083 neXtProt:NX_P14866 PharmGKB:PA162391389
InParanoid:P14866 OMA:RPTSVKV OrthoDB:EOG4RFKSD ChiTaRS:HNRNPL
GenomeRNAi:3191 NextBio:12694 ArrayExpress:P14866 Bgee:P14866
CleanEx:HS_HNRNPL Genevestigator:P14866 GermOnline:ENSG00000104824
Uniprot:P14866
Length = 589
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 192 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 250
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 251 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 286
>UNIPROTKB|F1LPP9 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:3191
IPI:IPI00765134 RefSeq:NP_001128232.1 UniGene:Rn.33873 PRIDE:F1LPP9
Ensembl:ENSRNOT00000057034 GeneID:80846 KEGG:rno:80846
NextBio:614884 ArrayExpress:F1LPP9 Uniprot:F1LPP9
Length = 623
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKES 75
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA++++ + +A AK S
Sbjct: 189 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 247
Query: 76 LEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
L G IY G C L + Y++ T LNV + DYT
Sbjct: 248 LNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 283
>DICTYBASE|DDB_G0275365 [details] [associations]
symbol:DDB_G0275365 "Heterogeneous nuclear
ribonucleoprotein L" species:44689 "Dictyostelium discoideum"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0275365 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AAFI02000013 eggNOG:NOG326285
TIGRFAMs:TIGR01649 RefSeq:XP_643683.1 ProteinModelPortal:Q553T2
EnsemblProtists:DDB0202577 GeneID:8619950 KEGG:ddi:DDB_G0275365
InParanoid:Q553T2 OMA:SITDSHN Uniprot:Q553T2
Length = 695
Score = 175 (66.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 44/138 (31%), Positives = 74/138 (53%)
Query: 2 QPTIGPD-GKKKELESNVLLASIENM-QYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQA 59
Q P+ + VLL++IEN ++T+D L VFS+ G V ++ +F KN QA
Sbjct: 139 QSNFSPNTNNSAPIAGTVLLSTIENPGSNSITIDHLYHVFSSCGEVLRIVMFNKNN-LQA 197
Query: 60 LIQYPDITTAAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDQTLL 119
LI++ + +A AK++L H ++ GG C L L S+ LN+ +D+++D++ T+
Sbjct: 198 LIEFSTVESALHAKKTLSNHSLFHGGQCTLKLEVSKTDRLNITQNTDRAKDFSKSLPTV- 256
Query: 120 ATQQIPSVPAAPSVWQSH 137
Q S S +QS+
Sbjct: 257 -NQSSSSSSQQQSYYQSN 273
>GENEDB_PFALCIPARUM|PFF0320c [details] [associations]
symbol:PFF0320c "polypyrimidine tract binding
protein, putative" species:5833 "Plasmodium falciparum" [GO:0008187
"poly-pyrimidine tract binding" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AL844505 GO:GO:0008187 RefSeq:XP_966055.1
ProteinModelPortal:C6KSR3 EnsemblProtists:PFF0320c:mRNA
GeneID:3885785 KEGG:pfa:PFF0320c EuPathDB:PlasmoDB:PF3D7_0606500
HOGENOM:HOG000281449 OMA:DATENEI ProtClustDB:CLSZ2432274
Uniprot:C6KSR3
Length = 663
Score = 163 (62.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/112 (33%), Positives = 66/112 (58%)
Query: 8 DGKKKELE-SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGT-QALIQYPD 65
+ K + E S V+L S+ N+ Y V ++++ +FS GTV+K+ F +N QAL+Q+ +
Sbjct: 306 NSKSNKAECSKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQALVQFDN 365
Query: 66 ITTAAVAKESLEGHCIYDGGYCK-LHLSYSRHTDLNVKAYSDKSRDYTVQDQ 116
+ TA A ++L IYDG C +++ YS +L +K + S DYT+ ++
Sbjct: 366 VETAKEAIKTLHNRNIYDG--CNTINIQYSFLKELVIKGNNSSSWDYTISNE 415
>UNIPROTKB|C6KSR3 [details] [associations]
symbol:PFF0320c "Polypyrimidine tract binding protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0008187
"poly-pyrimidine tract binding" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AL844505 GO:GO:0008187 RefSeq:XP_966055.1
ProteinModelPortal:C6KSR3 EnsemblProtists:PFF0320c:mRNA
GeneID:3885785 KEGG:pfa:PFF0320c EuPathDB:PlasmoDB:PF3D7_0606500
HOGENOM:HOG000281449 OMA:DATENEI ProtClustDB:CLSZ2432274
Uniprot:C6KSR3
Length = 663
Score = 163 (62.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/112 (33%), Positives = 66/112 (58%)
Query: 8 DGKKKELE-SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGT-QALIQYPD 65
+ K + E S V+L S+ N+ Y V ++++ +FS GTV+K+ F +N QAL+Q+ +
Sbjct: 306 NSKSNKAECSKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQALVQFDN 365
Query: 66 ITTAAVAKESLEGHCIYDGGYCK-LHLSYSRHTDLNVKAYSDKSRDYTVQDQ 116
+ TA A ++L IYDG C +++ YS +L +K + S DYT+ ++
Sbjct: 366 VETAKEAIKTLHNRNIYDG--CNTINIQYSFLKELVIKGNNSSSWDYTISNE 415
>UNIPROTKB|F1LY02 [details] [associations]
symbol:F1LY02 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00550000074508
IPI:IPI00778797 Ensembl:ENSRNOT00000036047 Uniprot:F1LY02
Length = 494
Score = 161 (61.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAKE 74
+S VL + N+ Y VT+DVL+ +FS FG V K+ F KN AL+Q D +A AK
Sbjct: 173 QSPVLRIIVGNLFYPVTLDVLHKIFSKFGRVLKIITFTKN----ALLQSADPVSAQHAKL 228
Query: 75 SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD 115
S +G I + C L +++S+ T LNV+ +DKSR YT+ D
Sbjct: 229 S-DGQNICNAR-CMLCINFSKLTRLNVQYNNDKSRGYTIPD 267
>UNIPROTKB|F1LQ48 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:RPTSVKV IPI:IPI00201964
Ensembl:ENSRNOT00000027425 ArrayExpress:F1LQ48 Uniprot:F1LQ48
Length = 595
Score = 161 (61.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 42/100 (42%), Positives = 58/100 (58%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYP---DITTAAVA 72
++VLL +I N Y++T DVL T+ + G VQ++ IF KNG QA+I P + +A A
Sbjct: 158 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMIVPPTFDSVQSAQRA 216
Query: 73 KESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYT 112
K SL G IY G C L + Y++ T LNV + DYT
Sbjct: 217 KASLNGADIYSG-CCTLKIEYAKPTRLNVFKNDQDTWDYT 255
>WB|WBGene00016624 [details] [associations]
symbol:C44B7.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:FO080141 eggNOG:NOG326285 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 OMA:RPTSVKV RefSeq:NP_495411.2
ProteinModelPortal:Q95QR5 SMR:Q95QR5 STRING:Q95QR5 PaxDb:Q95QR5
PRIDE:Q95QR5 EnsemblMetazoa:C44B7.2a.1 EnsemblMetazoa:C44B7.2a.2
EnsemblMetazoa:C44B7.2a.3 GeneID:3565706 KEGG:cel:CELE_C44B7.2
UCSC:C44B7.2a.1 CTD:3565706 WormBase:C44B7.2a InParanoid:Q95QR5
NextBio:957535 ArrayExpress:Q95QR5 Uniprot:Q95QR5
Length = 597
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 9 GKKKELESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITT 68
G + + VL+ ++ N QY + DV+ + +A G V +VA+ K QAL+++ +
Sbjct: 113 GFESATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEV 172
Query: 69 AAVAKESLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQD-QTLLATQQIPSV 127
A AK ++ G IY G C L + +++ + V+ RD+T+ D ++ T + +
Sbjct: 173 AKAAKHAMNGADIYSG-CCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLI 231
Query: 128 PAAP 131
PA P
Sbjct: 232 PAKP 235
>UNIPROTKB|K7ES59 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000586481 Uniprot:K7ES59
Length = 209
Score = 138 (53.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAK 73
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 150 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK 208
>UNIPROTKB|K7EKJ7 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000589575 Uniprot:K7EKJ7
Length = 236
Score = 138 (53.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAK 73
+S VL +EN+ Y VT+DVL+ +FS FGTV K+ F KN QAL+QY D +A AK
Sbjct: 177 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK 235
>UNIPROTKB|F6Q0P6 [details] [associations]
symbol:PTBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
GO:GO:0006376 GeneTree:ENSGT00550000074508 EMBL:DAAA02007826
IPI:IPI00876801 Ensembl:ENSBTAT00000011602 OMA:HICNACC
Uniprot:F6Q0P6
Length = 236
Score = 135 (52.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 15 ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALIQYPDITTAAVAK 73
+S VL I+NM Y VT+DVL+ +FS FG V K+ F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>UNIPROTKB|C9JJZ7 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC011247 HGNC:HGNC:25127 HOGENOM:HOG000168824 IPI:IPI00915954
ProteinModelPortal:C9JJZ7 SMR:C9JJZ7 STRING:C9JJZ7
Ensembl:ENST00000425682 ArrayExpress:C9JJZ7 Bgee:C9JJZ7
Uniprot:C9JJZ7
Length = 149
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 16 SNVLLASIENMQYAVTVDVLNTVFSAFGTVQKVAIFEKNGGTQALI 61
+ VLL SI+N Y +TVDVL TV + G VQ++ IF++NG QA++
Sbjct: 105 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMV 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 233 222 0.00096 112 3 11 23 0.47 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 598 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.02u 0.07s 26.09t Elapsed: 00:00:04
Total cpu time: 26.03u 0.07s 26.10t Elapsed: 00:00:04
Start: Sat May 11 05:07:01 2013 End: Sat May 11 05:07:05 2013