Query 026770
Match_columns 233
No_of_seqs 224 out of 2077
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 12:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026770.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026770hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 99.9 1.8E-27 4E-32 197.7 10.3 171 1-231 3-186 (220)
2 PRK13226 phosphoglycolate phos 99.9 1.1E-27 2.3E-32 200.2 8.8 169 1-231 11-192 (229)
3 TIGR01422 phosphonatase phosph 99.9 2.4E-26 5.1E-31 194.6 12.4 181 2-231 2-198 (253)
4 PLN02770 haloacid dehalogenase 99.9 1.1E-26 2.4E-31 196.4 9.2 91 135-231 104-205 (248)
5 PRK13288 pyrophosphatase PpaX; 99.9 6.6E-27 1.4E-31 193.1 7.5 90 135-230 78-178 (214)
6 PLN03243 haloacid dehalogenase 99.9 2.5E-26 5.4E-31 195.4 9.5 170 2-231 24-206 (260)
7 PRK13478 phosphonoacetaldehyde 99.9 1.1E-25 2.5E-30 192.0 12.7 183 2-231 4-200 (267)
8 TIGR03351 PhnX-like phosphonat 99.9 7.8E-26 1.7E-30 187.3 11.0 169 2-230 1-186 (220)
9 PRK11587 putative phosphatase; 99.9 2.5E-26 5.3E-31 190.5 7.9 166 2-231 3-179 (218)
10 TIGR01449 PGP_bact 2-phosphogl 99.9 4.3E-26 9.4E-31 187.5 8.3 102 124-231 70-182 (213)
11 PLN02575 haloacid dehalogenase 99.9 1.1E-25 2.3E-30 199.1 8.9 169 3-231 132-313 (381)
12 PRK10826 2-deoxyglucose-6-phos 99.9 1.8E-25 3.8E-30 185.6 8.1 91 135-231 88-189 (222)
13 PRK10725 fructose-1-P/6-phosph 99.9 1.6E-25 3.5E-30 180.8 7.2 89 136-231 85-183 (188)
14 PRK13225 phosphoglycolate phos 99.9 2.2E-25 4.8E-30 190.8 8.3 91 135-231 138-236 (273)
15 PRK10563 6-phosphogluconate ph 99.9 4.3E-25 9.3E-30 183.0 7.7 90 136-231 85-183 (221)
16 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 8.1E-25 1.7E-29 176.1 8.3 88 136-231 85-183 (185)
17 PRK13223 phosphoglycolate phos 99.9 1.3E-24 2.7E-29 186.2 8.7 173 1-230 12-197 (272)
18 TIGR01990 bPGM beta-phosphoglu 99.9 1.4E-24 3E-29 174.7 8.4 86 138-231 86-182 (185)
19 COG0637 Predicted phosphatase/ 99.9 8.7E-25 1.9E-29 181.8 5.9 171 1-231 1-183 (221)
20 PLN02940 riboflavin kinase 99.9 2.3E-24 5E-29 192.6 7.7 166 2-231 11-191 (382)
21 TIGR01454 AHBA_synth_RP 3-amin 99.9 2.8E-24 6E-29 176.3 7.0 90 136-231 72-172 (205)
22 TIGR02253 CTE7 HAD superfamily 99.9 5.4E-23 1.2E-27 170.1 14.3 90 136-231 91-192 (221)
23 PRK13222 phosphoglycolate phos 99.9 1.2E-23 2.7E-28 174.3 9.8 171 2-230 6-189 (226)
24 PRK06698 bifunctional 5'-methy 99.9 1.2E-23 2.5E-28 192.5 9.5 89 136-230 327-423 (459)
25 TIGR02252 DREG-2 REG-2-like, H 99.9 1.6E-23 3.5E-28 171.3 7.9 87 138-231 104-202 (203)
26 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 2.4E-23 5.2E-28 169.9 8.2 82 139-225 106-197 (197)
27 TIGR01428 HAD_type_II 2-haloal 99.9 1.8E-22 3.8E-27 164.6 10.3 89 137-231 90-189 (198)
28 PRK09449 dUMP phosphatase; Pro 99.9 9E-23 1.9E-27 169.4 8.5 91 135-231 91-193 (224)
29 TIGR02254 YjjG/YfnB HAD superf 99.9 2.5E-22 5.3E-27 166.2 9.4 89 136-231 94-195 (224)
30 TIGR01993 Pyr-5-nucltdase pyri 99.9 5.3E-22 1.1E-26 160.1 11.1 89 137-231 82-182 (184)
31 PRK14988 GMP/IMP nucleotidase; 99.9 6.2E-22 1.3E-26 165.0 11.0 89 136-230 90-189 (224)
32 PRK10748 flavin mononucleotide 99.9 3.8E-22 8.2E-27 167.6 9.4 117 99-231 78-205 (238)
33 PF13419 HAD_2: Haloacid dehal 99.9 3.1E-22 6.7E-27 158.0 5.7 91 135-231 73-174 (176)
34 PHA02597 30.2 hypothetical pro 99.9 1.1E-21 2.4E-26 159.9 8.0 89 135-231 70-171 (197)
35 PLN02779 haloacid dehalogenase 99.8 2.4E-20 5.1E-25 160.9 14.9 87 138-231 143-243 (286)
36 TIGR02247 HAD-1A3-hyp Epoxide 99.8 1.4E-21 2.9E-26 160.9 5.3 89 137-231 92-193 (211)
37 PLN02919 haloacid dehalogenase 99.8 4.1E-21 8.8E-26 190.0 9.0 172 2-231 75-259 (1057)
38 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1.1E-20 2.4E-25 148.0 7.1 82 137-225 62-153 (154)
39 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 5.2E-21 1.1E-25 152.9 4.1 79 137-224 88-174 (175)
40 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 8.6E-19 1.9E-23 140.3 13.9 87 138-231 84-181 (183)
41 PLN02811 hydrolase 99.8 4.4E-20 9.6E-25 153.2 6.1 90 136-231 75-181 (220)
42 PRK09456 ?-D-glucose-1-phospha 99.8 9.3E-19 2E-23 143.1 10.4 88 139-231 84-182 (199)
43 COG1011 Predicted hydrolase (H 99.8 5.7E-18 1.2E-22 140.5 11.1 89 137-231 97-196 (229)
44 TIGR00338 serB phosphoserine p 99.7 4.1E-18 8.9E-23 140.9 8.5 87 136-228 82-189 (219)
45 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 9.6E-18 2.1E-22 136.4 8.8 85 136-225 77-182 (201)
46 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 3.1E-17 6.7E-22 131.9 11.2 83 138-225 71-181 (188)
47 PLN02954 phosphoserine phospha 99.7 2E-17 4.2E-22 137.3 10.1 86 138-229 83-191 (224)
48 TIGR01672 AphA HAD superfamily 99.7 7.4E-18 1.6E-22 141.1 7.0 90 135-231 110-208 (237)
49 PRK09552 mtnX 2-hydroxy-3-keto 99.7 3.9E-17 8.4E-22 135.5 10.6 86 136-228 71-181 (219)
50 TIGR01685 MDP-1 magnesium-depe 99.7 2.5E-17 5.4E-22 131.8 6.1 90 136-231 42-154 (174)
51 KOG2914 Predicted haloacid-hal 99.7 4.7E-17 1E-21 134.4 6.4 166 3-229 11-191 (222)
52 PRK13582 thrH phosphoserine ph 99.6 5.2E-16 1.1E-20 126.9 8.5 85 136-226 65-164 (205)
53 TIGR01691 enolase-ppase 2,3-di 99.6 2.8E-15 6E-20 124.5 9.8 100 126-231 83-193 (220)
54 TIGR01656 Histidinol-ppas hist 99.6 1.6E-15 3.4E-20 118.4 6.6 86 139-231 27-142 (147)
55 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 3.2E-15 6.9E-20 114.1 7.6 81 139-224 29-126 (128)
56 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 7.9E-15 1.7E-19 112.0 8.7 85 139-231 25-128 (132)
57 PRK08942 D,D-heptose 1,7-bisph 99.6 1.1E-14 2.4E-19 117.4 9.3 85 139-231 29-144 (181)
58 PRK11009 aphA acid phosphatase 99.6 2E-14 4.3E-19 120.4 10.7 87 135-231 110-208 (237)
59 TIGR01261 hisB_Nterm histidino 99.6 1.2E-14 2.6E-19 115.2 7.8 86 138-231 28-144 (161)
60 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 3.3E-14 7.1E-19 113.2 10.4 85 140-232 43-160 (166)
61 TIGR03333 salvage_mtnX 2-hydro 99.6 6.3E-14 1.4E-18 115.9 12.4 84 137-225 68-175 (214)
62 TIGR00213 GmhB_yaeD D,D-heptos 99.5 4.9E-14 1.1E-18 113.1 11.1 84 139-230 26-146 (176)
63 KOG3085 Predicted hydrolase (H 99.5 2.3E-15 4.9E-20 125.0 2.3 88 137-231 111-210 (237)
64 PRK11133 serB phosphoserine ph 99.5 4.1E-14 9E-19 123.7 7.2 87 136-228 178-285 (322)
65 PRK11590 hypothetical protein; 99.5 2.1E-13 4.5E-18 112.6 10.5 82 138-225 94-195 (211)
66 TIGR02137 HSK-PSP phosphoserin 99.4 7.9E-13 1.7E-17 108.6 11.1 83 137-225 66-163 (203)
67 TIGR01488 HAD-SF-IB Haloacid D 99.4 1.3E-12 2.8E-17 104.1 11.8 84 136-224 70-176 (177)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.4 7E-12 1.5E-16 102.2 15.0 103 109-225 66-190 (202)
69 PRK05446 imidazole glycerol-ph 99.4 1.5E-12 3.2E-17 114.9 9.6 87 137-231 28-145 (354)
70 cd01427 HAD_like Haloacid deha 99.4 2E-12 4.4E-17 97.2 9.0 88 138-231 23-137 (139)
71 PF00702 Hydrolase: haloacid d 99.3 1.2E-12 2.6E-17 107.0 5.0 80 138-225 126-214 (215)
72 KOG3109 Haloacid dehalogenase- 99.3 1E-11 2.3E-16 100.7 9.6 91 135-231 96-202 (244)
73 COG0560 SerB Phosphoserine pho 99.3 2.4E-11 5.2E-16 100.4 11.7 83 138-225 76-179 (212)
74 TIGR02726 phenyl_P_delta pheny 99.3 5.8E-12 1.3E-16 100.5 7.7 70 146-225 44-117 (169)
75 TIGR01686 FkbH FkbH-like domai 99.3 6.9E-12 1.5E-16 109.9 8.5 81 140-226 32-123 (320)
76 PRK06769 hypothetical protein; 99.3 5.6E-12 1.2E-16 101.0 6.0 89 137-231 26-134 (173)
77 smart00577 CPDc catalytic doma 99.2 1.4E-11 3E-16 96.3 6.1 86 137-228 43-136 (148)
78 PF06888 Put_Phosphatase: Puta 99.2 1.4E-10 3E-15 96.9 12.0 88 136-224 68-187 (234)
79 TIGR01544 HAD-SF-IE haloacid d 99.2 2E-09 4.3E-14 91.9 15.9 114 96-228 92-233 (277)
80 PRK08238 hypothetical protein; 99.1 6E-10 1.3E-14 102.3 12.0 79 138-226 71-159 (479)
81 TIGR01545 YfhB_g-proteo haloac 99.1 3.8E-09 8.2E-14 87.2 14.3 81 138-224 93-193 (210)
82 PHA02530 pseT polynucleotide k 99.1 2.3E-10 5E-15 99.0 6.6 88 138-231 186-293 (300)
83 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.1 4.3E-11 9.2E-16 101.8 1.5 86 140-231 121-221 (257)
84 TIGR01663 PNK-3'Pase polynucle 99.0 9.9E-10 2.1E-14 101.6 8.7 80 140-226 198-304 (526)
85 TIGR01533 lipo_e_P4 5'-nucleot 99.0 5E-09 1.1E-13 89.2 11.9 84 136-224 115-206 (266)
86 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 9.7E-10 2.1E-14 92.5 7.2 81 138-223 23-112 (242)
87 TIGR01668 YqeG_hyp_ppase HAD s 98.9 1.7E-09 3.8E-14 86.3 6.6 83 138-231 42-133 (170)
88 PF12710 HAD: haloacid dehalog 98.9 6.6E-09 1.4E-13 83.5 10.0 75 142-223 92-192 (192)
89 COG4359 Uncharacterized conser 98.9 2E-08 4.2E-13 79.7 11.9 85 136-225 70-178 (220)
90 KOG3120 Predicted haloacid deh 98.9 7.5E-09 1.6E-13 84.3 7.7 51 136-187 81-135 (256)
91 TIGR02244 HAD-IG-Ncltidse HAD 98.9 1.7E-08 3.7E-13 88.7 10.7 95 133-231 178-320 (343)
92 PF12689 Acid_PPase: Acid Phos 98.9 6.1E-09 1.3E-13 82.8 6.8 83 136-224 42-142 (169)
93 TIGR01684 viral_ppase viral ph 98.8 1.5E-08 3.2E-13 86.7 7.0 47 142-189 149-198 (301)
94 TIGR01670 YrbI-phosphatas 3-de 98.8 1.4E-08 3.1E-13 79.7 6.3 73 144-226 36-112 (154)
95 KOG1615 Phosphoserine phosphat 98.7 1E-07 2.2E-12 76.3 9.4 84 136-224 85-191 (227)
96 PRK09484 3-deoxy-D-manno-octul 98.7 5.2E-08 1.1E-12 78.7 6.7 73 146-229 58-134 (183)
97 PHA03398 viral phosphatase sup 98.7 7.4E-08 1.6E-12 82.5 7.5 40 149-189 161-200 (303)
98 PRK10530 pyridoxal phosphate ( 98.5 8.1E-08 1.8E-12 81.7 4.9 81 140-225 138-234 (272)
99 TIGR01525 ATPase-IB_hvy heavy 98.5 1.6E-07 3.5E-12 88.2 6.3 81 137-225 382-466 (556)
100 COG4229 Predicted enolase-phos 98.5 2.3E-06 5E-11 68.0 11.3 88 137-229 101-199 (229)
101 PRK10444 UMP phosphatase; Prov 98.5 4.5E-08 9.7E-13 82.9 1.8 37 190-231 175-216 (248)
102 PRK00192 mannosyl-3-phosphogly 98.5 2E-07 4.3E-12 79.8 5.4 69 150-225 146-226 (273)
103 TIGR01512 ATPase-IB2_Cd heavy 98.5 3.2E-07 7E-12 85.8 6.7 82 137-226 360-445 (536)
104 PLN02645 phosphoglycolate phos 98.4 1.8E-06 3.9E-11 75.5 9.6 84 139-229 44-133 (311)
105 TIGR02251 HIF-SF_euk Dullard-l 98.3 5.9E-07 1.3E-11 71.2 4.3 86 138-229 41-134 (162)
106 COG4996 Predicted phosphatase 98.3 1.3E-06 2.9E-11 65.7 5.9 87 136-227 38-137 (164)
107 COG0241 HisB Histidinol phosph 98.3 4.9E-06 1.1E-10 66.8 9.1 86 138-231 30-146 (181)
108 TIGR01511 ATPase-IB1_Cu copper 98.3 2.3E-06 5.1E-11 80.5 7.5 78 138-225 404-485 (562)
109 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.2 1.9E-07 4E-12 78.6 -0.8 84 141-231 140-238 (242)
110 COG1778 Low specificity phosph 98.2 2.7E-06 5.8E-11 66.0 5.6 71 147-225 46-118 (170)
111 TIGR01452 PGP_euk phosphoglyco 98.2 1.5E-07 3.3E-12 80.9 -1.8 85 140-231 144-244 (279)
112 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.2 8.5E-06 1.8E-10 68.9 8.6 75 150-231 134-220 (249)
113 PRK01158 phosphoglycolate phos 98.1 2.8E-06 6E-11 70.5 4.7 65 154-225 117-192 (230)
114 COG2179 Predicted hydrolase of 98.1 7.7E-06 1.7E-10 64.2 6.1 83 139-231 46-135 (175)
115 TIGR01460 HAD-SF-IIA Haloacid 98.1 1.6E-05 3.4E-10 66.8 8.3 37 190-231 189-231 (236)
116 PF08645 PNK3P: Polynucleotide 98.0 1.5E-05 3.2E-10 63.0 6.4 80 141-228 31-150 (159)
117 TIGR01675 plant-AP plant acid 97.9 0.00013 2.8E-09 60.9 11.1 81 135-221 116-211 (229)
118 PRK10671 copA copper exporting 97.9 1.6E-05 3.5E-10 78.2 5.9 79 138-225 649-731 (834)
119 TIGR01482 SPP-subfamily Sucros 97.8 3E-05 6.5E-10 63.9 5.6 65 154-225 109-184 (225)
120 TIGR01452 PGP_euk phosphoglyco 97.8 8.1E-05 1.8E-09 63.9 8.4 61 149-215 31-94 (279)
121 TIGR01456 CECR5 HAD-superfamil 97.8 0.00014 3E-09 63.8 9.8 24 207-231 264-288 (321)
122 TIGR02250 FCP1_euk FCP1-like p 97.8 6.3E-05 1.4E-09 59.2 6.2 83 136-223 55-144 (156)
123 PF06941 NT5C: 5' nucleotidase 97.8 3.1E-05 6.7E-10 62.8 4.2 76 135-225 69-154 (191)
124 PLN02645 phosphoglycolate phos 97.7 6.2E-06 1.3E-10 72.0 -0.4 77 149-231 183-272 (311)
125 PF03767 Acid_phosphat_B: HAD 97.7 7.2E-05 1.6E-09 62.6 5.9 81 137-222 113-208 (229)
126 smart00775 LNS2 LNS2 domain. T 97.7 0.00051 1.1E-08 54.1 9.9 87 141-228 29-140 (157)
127 TIGR01522 ATPase-IIA2_Ca golgi 97.6 0.00014 3.1E-09 72.0 7.8 82 139-225 528-636 (884)
128 TIGR01680 Veg_Stor_Prot vegeta 97.6 0.0012 2.6E-08 56.2 11.9 82 135-222 141-238 (275)
129 COG3700 AphA Acid phosphatase 97.6 0.00018 3.9E-09 57.2 6.2 90 133-232 108-209 (237)
130 PRK11033 zntA zinc/cadmium/mer 97.5 0.00023 5E-09 69.2 7.1 75 139-225 568-647 (741)
131 PTZ00445 p36-lilke protein; Pr 97.5 0.0003 6.4E-09 57.7 6.4 87 140-232 76-203 (219)
132 PRK10513 sugar phosphate phosp 97.4 0.00045 9.7E-09 58.7 7.2 35 149-184 33-67 (270)
133 PRK15126 thiamin pyrimidine py 97.4 0.0003 6.4E-09 60.0 5.7 17 1-17 1-17 (272)
134 COG2503 Predicted secreted aci 97.4 0.0019 4.1E-08 53.8 9.8 84 136-224 119-211 (274)
135 PF13242 Hydrolase_like: HAD-h 97.3 0.00016 3.4E-09 49.6 2.6 34 193-231 12-46 (75)
136 PRK10976 putative hydrolase; P 97.3 0.00039 8.5E-09 59.0 5.6 17 1-17 1-17 (266)
137 COG0647 NagD Predicted sugar p 97.3 0.00066 1.4E-08 58.0 6.7 49 140-188 25-79 (269)
138 PLN02177 glycerol-3-phosphate 97.3 0.0067 1.5E-07 56.4 13.3 74 140-223 111-205 (497)
139 COG0561 Cof Predicted hydrolas 97.1 0.0013 2.8E-08 55.7 6.5 17 1-17 2-18 (264)
140 COG5663 Uncharacterized conser 97.1 0.00054 1.2E-08 53.9 3.2 79 140-229 73-156 (194)
141 PF05761 5_nucleotid: 5' nucle 97.0 0.0027 5.9E-08 58.1 8.0 85 139-227 183-317 (448)
142 TIGR01116 ATPase-IIA1_Ca sarco 97.0 0.0022 4.8E-08 63.9 7.8 82 139-225 537-649 (917)
143 TIGR01487 SPP-like sucrose-pho 97.0 0.0015 3.3E-08 53.6 5.6 28 194-225 155-182 (215)
144 COG2217 ZntA Cation transport 96.9 0.0015 3.3E-08 63.0 5.8 81 139-227 537-621 (713)
145 PRK12702 mannosyl-3-phosphogly 96.9 0.0021 4.6E-08 55.5 5.8 30 149-179 31-60 (302)
146 COG4087 Soluble P-type ATPase 96.8 0.0039 8.4E-08 47.3 6.0 81 137-225 28-112 (152)
147 TIGR02461 osmo_MPG_phos mannos 96.8 0.003 6.5E-08 52.6 5.9 29 149-178 28-56 (225)
148 TIGR02463 MPGP_rel mannosyl-3- 96.7 0.0055 1.2E-07 50.4 6.6 28 149-177 29-56 (221)
149 PRK03669 mannosyl-3-phosphogly 96.6 0.0058 1.2E-07 52.2 6.8 28 149-177 37-64 (271)
150 TIGR02463 MPGP_rel mannosyl-3- 96.5 0.0092 2E-07 49.1 6.6 69 152-225 138-214 (221)
151 PRK14010 potassium-transportin 96.4 0.0056 1.2E-07 58.9 5.7 76 139-224 441-521 (673)
152 TIGR01497 kdpB K+-transporting 96.4 0.011 2.3E-07 56.9 7.5 77 139-225 446-527 (675)
153 PF08282 Hydrolase_3: haloacid 96.4 0.0081 1.8E-07 49.5 5.9 28 149-177 28-55 (254)
154 TIGR00099 Cof-subfamily Cof su 96.4 0.008 1.7E-07 50.6 5.8 14 4-17 1-14 (256)
155 TIGR01486 HAD-SF-IIB-MPGP mann 96.3 0.011 2.4E-07 49.9 6.6 29 149-178 29-57 (256)
156 PRK01122 potassium-transportin 96.3 0.014 3E-07 56.3 7.7 77 139-224 445-525 (679)
157 PF11019 DUF2608: Protein of u 96.2 0.089 1.9E-06 44.6 11.4 80 140-225 82-197 (252)
158 KOG0207 Cation transport ATPas 96.2 0.019 4E-07 56.1 7.9 81 139-228 723-808 (951)
159 PF05152 DUF705: Protein of un 96.0 0.03 6.4E-07 48.0 7.3 38 149-187 155-192 (297)
160 PF09419 PGP_phosphatase: Mito 95.8 0.045 9.7E-07 43.6 7.3 80 139-228 59-158 (168)
161 TIGR01647 ATPase-IIIA_H plasma 95.8 0.028 6.1E-07 55.0 7.3 81 139-225 442-553 (755)
162 PTZ00174 phosphomannomutase; P 95.8 0.0077 1.7E-07 50.7 3.0 31 190-224 188-222 (247)
163 TIGR02471 sucr_syn_bact_C sucr 95.7 0.052 1.1E-06 45.2 7.6 14 4-17 1-14 (236)
164 PF13344 Hydrolase_6: Haloacid 95.7 0.019 4.1E-07 41.7 4.3 49 138-187 13-67 (101)
165 TIGR01517 ATPase-IIB_Ca plasma 95.7 0.047 1E-06 54.8 8.4 81 139-224 579-686 (941)
166 TIGR01524 ATPase-IIIB_Mg magne 95.6 0.044 9.6E-07 54.5 7.9 80 139-225 515-621 (867)
167 PRK10517 magnesium-transportin 95.5 0.041 8.8E-07 54.9 7.4 80 139-225 550-656 (902)
168 COG3882 FkbH Predicted enzyme 95.5 0.048 1E-06 49.9 6.9 69 148-226 267-347 (574)
169 PF06189 5-nucleotidase: 5'-nu 95.5 0.076 1.6E-06 45.0 7.7 65 150-225 184-251 (264)
170 PRK15122 magnesium-transportin 95.4 0.043 9.3E-07 54.8 7.0 79 139-224 550-655 (903)
171 PRK14502 bifunctional mannosyl 95.1 0.041 8.8E-07 52.8 5.7 29 149-178 446-474 (694)
172 PLN02423 phosphomannomutase 95.1 0.018 3.9E-07 48.6 2.9 30 190-224 189-222 (245)
173 TIGR01523 ATPase-IID_K-Na pota 95.1 0.081 1.8E-06 53.7 7.9 82 139-225 646-764 (1053)
174 TIGR01689 EcbF-BcbF capsule bi 95.0 0.014 3E-07 44.3 1.6 15 3-17 2-16 (126)
175 TIGR01487 SPP-like sucrose-pho 94.9 0.065 1.4E-06 43.8 5.7 26 2-27 1-26 (215)
176 TIGR01485 SPP_plant-cyano sucr 94.8 0.065 1.4E-06 45.0 5.6 20 207-226 184-203 (249)
177 PLN02887 hydrolase family prot 94.8 0.024 5.1E-07 53.8 3.0 30 192-225 513-542 (580)
178 PRK10187 trehalose-6-phosphate 94.6 0.062 1.3E-06 45.9 5.0 18 208-225 192-209 (266)
179 TIGR01106 ATPase-IIC_X-K sodiu 94.5 0.13 2.7E-06 52.1 7.8 38 139-177 568-608 (997)
180 PLN02499 glycerol-3-phosphate 94.5 0.2 4.3E-06 46.4 8.2 35 142-177 99-133 (498)
181 KOG2630 Enolase-phosphatase E- 94.1 0.2 4.4E-06 41.6 6.8 87 138-230 122-220 (254)
182 PF03031 NIF: NLI interacting 93.9 0.044 9.5E-07 42.7 2.5 78 138-220 35-120 (159)
183 PF05822 UMPH-1: Pyrimidine 5' 93.9 0.14 3.1E-06 43.1 5.6 114 96-226 61-199 (246)
184 COG0474 MgtA Cation transport 93.3 0.29 6.3E-06 49.1 7.6 82 139-225 547-657 (917)
185 TIGR01670 YrbI-phosphatas 3-de 93.2 0.039 8.5E-07 43.0 1.2 16 2-17 1-16 (154)
186 TIGR01494 ATPase_P-type ATPase 93.2 0.35 7.6E-06 45.0 7.6 73 139-224 347-424 (499)
187 PRK09484 3-deoxy-D-manno-octul 93.1 0.044 9.6E-07 44.0 1.3 15 2-16 21-35 (183)
188 TIGR01657 P-ATPase-V P-type AT 92.8 0.58 1.3E-05 47.7 9.1 38 139-177 656-696 (1054)
189 KOG3040 Predicted sugar phosph 92.7 0.054 1.2E-06 44.5 1.3 36 193-232 189-224 (262)
190 TIGR01485 SPP_plant-cyano sucr 92.7 0.53 1.1E-05 39.5 7.4 12 4-15 3-14 (249)
191 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.9 0.33 7E-06 41.0 5.1 48 139-187 17-70 (249)
192 TIGR01484 HAD-SF-IIB HAD-super 91.7 0.14 3E-06 41.5 2.6 29 193-225 170-198 (204)
193 PF03031 NIF: NLI interacting 91.6 0.07 1.5E-06 41.5 0.7 15 3-17 1-15 (159)
194 KOG0202 Ca2+ transporting ATPa 91.4 0.64 1.4E-05 45.5 6.9 82 139-225 584-696 (972)
195 KOG2470 Similar to IMP-GMP spe 91.0 0.4 8.6E-06 42.4 4.8 46 142-187 243-293 (510)
196 TIGR01652 ATPase-Plipid phosph 90.9 1 2.2E-05 46.0 8.3 39 139-178 631-672 (1057)
197 PLN02205 alpha,alpha-trehalose 90.9 0.43 9.3E-06 47.5 5.5 23 199-225 778-800 (854)
198 COG2216 KdpB High-affinity K+ 90.8 0.38 8.3E-06 44.7 4.6 81 140-228 448-532 (681)
199 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.4 0.28 6.1E-06 41.6 3.3 47 139-186 21-73 (257)
200 PF13344 Hydrolase_6: Haloacid 89.6 0.16 3.5E-06 36.7 1.1 13 5-17 1-13 (101)
201 TIGR02471 sucr_syn_bact_C sucr 88.9 1.2 2.6E-05 36.8 6.0 28 194-225 167-194 (236)
202 TIGR01658 EYA-cons_domain eyes 88.6 1.2 2.5E-05 37.7 5.5 73 152-225 175-249 (274)
203 TIGR00099 Cof-subfamily Cof su 87.8 1.9 4.1E-05 36.1 6.5 29 193-225 195-223 (256)
204 TIGR00685 T6PP trehalose-phosp 87.0 0.3 6.5E-06 40.9 1.2 29 193-225 174-202 (244)
205 COG0647 NagD Predicted sugar p 87.0 0.54 1.2E-05 40.3 2.8 34 193-231 198-232 (269)
206 TIGR01484 HAD-SF-IIB HAD-super 85.6 0.77 1.7E-05 37.0 2.9 14 4-17 1-14 (204)
207 PRK10444 UMP phosphatase; Prov 85.1 1.5 3.2E-05 37.0 4.5 47 139-186 17-69 (248)
208 PRK00192 mannosyl-3-phosphogly 84.9 1.4 3E-05 37.5 4.3 39 141-180 23-64 (273)
209 COG4030 Uncharacterized protei 84.9 17 0.00037 30.6 10.3 38 138-176 82-121 (315)
210 PLN03063 alpha,alpha-trehalose 84.3 1.9 4.1E-05 42.7 5.4 15 3-17 508-522 (797)
211 smart00577 CPDc catalytic doma 83.0 0.71 1.5E-05 35.6 1.5 15 3-17 3-17 (148)
212 PLN03190 aminophospholipid tra 82.3 3.3 7.1E-05 42.8 6.3 34 139-172 726-762 (1178)
213 PRK10976 putative hydrolase; P 82.2 0.96 2.1E-05 38.1 2.2 29 193-225 197-225 (266)
214 PLN03064 alpha,alpha-trehalose 82.1 2.4 5.2E-05 42.6 5.1 33 140-172 623-659 (934)
215 TIGR02245 HAD_IIID1 HAD-superf 81.7 0.77 1.7E-05 37.4 1.4 36 141-177 47-84 (195)
216 PRK10513 sugar phosphate phosp 81.6 1.1 2.4E-05 37.7 2.4 29 193-225 203-231 (270)
217 KOG3128 Uncharacterized conser 81.2 8.1 0.00018 32.9 7.2 86 142-230 141-252 (298)
218 COG1877 OtsB Trehalose-6-phosp 80.2 0.9 2E-05 38.9 1.3 42 190-231 182-223 (266)
219 PF08282 Hydrolase_3: haloacid 79.2 2.5 5.4E-05 34.4 3.7 29 193-225 193-221 (254)
220 TIGR01486 HAD-SF-IIB-MPGP mann 78.5 2.2 4.7E-05 35.8 3.2 29 193-225 183-213 (256)
221 PRK15126 thiamin pyrimidine py 78.5 1.7 3.7E-05 36.8 2.5 29 193-225 195-223 (272)
222 TIGR00685 T6PP trehalose-phosp 77.7 2.2 4.8E-05 35.7 3.0 14 3-16 4-17 (244)
223 KOG2882 p-Nitrophenyl phosphat 77.5 12 0.00025 32.6 7.2 41 137-178 36-82 (306)
224 TIGR02251 HIF-SF_euk Dullard-l 77.0 1.4 3.1E-05 34.6 1.5 15 3-17 2-16 (162)
225 PRK14501 putative bifunctional 75.7 1.4 3E-05 43.1 1.3 31 191-225 658-690 (726)
226 PRK03669 mannosyl-3-phosphogly 75.3 2.9 6.3E-05 35.4 3.1 30 192-225 193-225 (271)
227 PLN03017 trehalose-phosphatase 75.2 1.5 3.2E-05 39.3 1.2 16 209-224 305-320 (366)
228 PLN02580 trehalose-phosphatase 75.2 1.5 3.2E-05 39.6 1.3 15 210-224 324-338 (384)
229 KOG0323 TFIIF-interacting CTD 75.1 6.7 0.00014 37.7 5.6 81 137-220 199-283 (635)
230 KOG4549 Magnesium-dependent ph 75.1 12 0.00026 28.4 5.8 84 136-220 41-136 (144)
231 TIGR01460 HAD-SF-IIA Haloacid 74.0 6.7 0.00014 32.6 4.9 47 139-186 14-67 (236)
232 KOG2134 Polynucleotide kinase 73.5 1.7 3.7E-05 39.0 1.2 15 3-17 76-90 (422)
233 PF05116 S6PP: Sucrose-6F-phos 73.4 5 0.00011 33.7 4.1 33 193-231 172-204 (247)
234 PLN02151 trehalose-phosphatase 73.1 1.8 3.8E-05 38.7 1.2 15 209-223 291-305 (354)
235 PF08235 LNS2: LNS2 (Lipin/Ned 72.5 1.9 4.2E-05 33.9 1.2 26 141-166 29-57 (157)
236 COG3769 Predicted hydrolase (H 71.6 2.2 4.8E-05 35.5 1.4 15 1-15 6-20 (274)
237 KOG2469 IMP-GMP specific 5'-nu 70.2 22 0.00047 32.3 7.3 39 148-186 210-250 (424)
238 COG0561 Cof Predicted hydrolas 70.2 3.6 7.7E-05 34.6 2.4 30 192-225 195-224 (264)
239 PF09419 PGP_phosphatase: Mito 69.9 2.4 5.2E-05 33.7 1.2 14 2-15 41-54 (168)
240 COG0731 Fe-S oxidoreductases [ 69.7 17 0.00038 31.6 6.5 44 136-186 89-136 (296)
241 PRK06769 hypothetical protein; 69.1 2.8 6.1E-05 33.1 1.5 13 2-14 4-16 (173)
242 PRK01158 phosphoglycolate phos 68.5 8.3 0.00018 31.4 4.3 39 140-179 21-62 (230)
243 PF02358 Trehalose_PPase: Treh 68.4 2.4 5.1E-05 35.2 1.0 38 190-227 165-205 (235)
244 PLN02382 probable sucrose-phos 67.6 2.8 6.1E-05 38.2 1.3 29 193-225 182-213 (413)
245 TIGR02461 osmo_MPG_phos mannos 65.9 7.9 0.00017 32.0 3.6 28 194-225 189-218 (225)
246 PLN02887 hydrolase family prot 65.4 4.6 9.9E-05 38.5 2.3 29 1-29 307-335 (580)
247 KOG2882 p-Nitrophenyl phosphat 65.1 6 0.00013 34.4 2.8 31 194-229 233-264 (306)
248 TIGR02250 FCP1_euk FCP1-like p 64.7 3.8 8.2E-05 32.1 1.4 15 3-17 7-21 (156)
249 KOG3217 Protein tyrosine phosp 63.6 14 0.0003 28.7 4.2 70 135-214 51-120 (159)
250 PRK10530 pyridoxal phosphate ( 63.1 13 0.00029 31.0 4.6 38 140-178 21-61 (272)
251 COG5083 SMP2 Uncharacterized p 62.2 4.1 8.9E-05 37.2 1.3 16 2-17 375-390 (580)
252 TIGR01668 YqeG_hyp_ppase HAD s 61.2 4.8 0.0001 31.7 1.4 15 3-17 26-40 (170)
253 KOG3107 Predicted haloacid deh 60.9 22 0.00049 32.0 5.6 74 150-225 368-443 (468)
254 TIGR01482 SPP-subfamily Sucros 60.1 14 0.0003 30.0 4.0 36 142-178 18-56 (225)
255 COG2179 Predicted hydrolase of 58.3 5.3 0.00011 31.8 1.2 12 3-14 29-40 (175)
256 COG4502 5'(3')-deoxyribonucleo 56.5 38 0.00083 26.3 5.5 72 136-223 65-144 (180)
257 PLN02382 probable sucrose-phos 52.7 15 0.00031 33.6 3.2 34 181-221 196-229 (413)
258 COG0241 HisB Histidinol phosph 50.5 9 0.00019 30.9 1.3 15 3-17 6-20 (181)
259 KOG3189 Phosphomannomutase [Li 49.9 8.8 0.00019 31.5 1.2 15 3-17 12-26 (252)
260 PRK10187 trehalose-6-phosphate 48.4 15 0.00033 31.2 2.6 45 165-215 178-222 (266)
261 TIGR01689 EcbF-BcbF capsule bi 48.0 39 0.00085 25.4 4.4 44 139-185 24-85 (126)
262 smart00266 CAD Domains present 47.9 9.8 0.00021 26.0 1.0 14 4-17 40-53 (74)
263 cd06537 CIDE_N_B CIDE_N domain 47.9 9.8 0.00021 26.4 1.0 14 4-17 41-54 (81)
264 KOG0204 Calcium transporting A 47.6 81 0.0018 31.7 7.4 41 139-180 647-690 (1034)
265 PRK13762 tRNA-modifying enzyme 47.3 47 0.001 29.2 5.5 28 137-164 140-170 (322)
266 cd06539 CIDE_N_A CIDE_N domain 47.3 10 0.00022 26.1 1.1 14 4-17 42-55 (78)
267 PF02593 dTMP_synthase: Thymid 46.8 69 0.0015 26.6 6.1 70 139-214 59-141 (217)
268 PTZ00445 p36-lilke protein; Pr 46.6 8 0.00017 32.0 0.5 14 2-15 43-56 (219)
269 cd01615 CIDE_N CIDE_N domain, 42.5 13 0.00029 25.6 1.0 14 4-17 42-55 (78)
270 COG4850 Uncharacterized conser 41.9 89 0.0019 27.7 6.1 31 137-167 194-228 (373)
271 TIGR01456 CECR5 HAD-superfamil 41.1 21 0.00046 31.2 2.4 39 139-178 16-65 (321)
272 KOG1605 TFIIF-interacting CTD 41.0 16 0.00035 31.2 1.5 16 2-17 89-104 (262)
273 PHA02530 pseT polynucleotide k 41.0 16 0.00034 31.2 1.5 15 3-17 159-173 (300)
274 cd06536 CIDE_N_ICAD CIDE_N dom 40.7 14 0.00031 25.5 1.0 14 4-17 44-57 (80)
275 KOG3040 Predicted sugar phosph 40.1 40 0.00088 28.0 3.6 47 139-186 23-75 (262)
276 TIGR02329 propionate_PrpR prop 39.1 53 0.0011 31.0 4.8 72 150-231 95-167 (526)
277 PF08620 RPAP1_C: RPAP1-like, 39.0 11 0.00025 25.6 0.2 10 5-14 3-12 (73)
278 PRK15424 propionate catabolism 38.7 53 0.0011 31.2 4.7 20 210-231 158-177 (538)
279 COG5610 Predicted hydrolase (H 37.4 1.1E+02 0.0024 28.5 6.3 88 136-228 94-196 (635)
280 TIGR02244 HAD-IG-Ncltidse HAD 36.9 17 0.00037 32.3 1.1 13 3-15 13-25 (343)
281 TIGR02245 HAD_IIID1 HAD-superf 36.8 96 0.0021 25.2 5.4 15 3-17 22-36 (195)
282 cd06538 CIDE_N_FSP27 CIDE_N do 36.1 19 0.00041 24.9 1.0 14 4-17 41-54 (79)
283 KOG1618 Predicted phosphatase 36.0 18 0.00038 32.0 1.0 11 4-14 37-47 (389)
284 PRK12702 mannosyl-3-phosphogly 36.0 2.8E+02 0.0061 24.3 8.3 27 2-28 1-27 (302)
285 PF04413 Glycos_transf_N: 3-De 35.6 12 0.00027 30.0 0.0 75 137-219 103-184 (186)
286 PLN02423 phosphomannomutase 34.6 37 0.00081 28.4 2.8 27 3-29 8-34 (245)
287 PF02017 CIDE-N: CIDE-N domain 33.6 24 0.00053 24.3 1.2 14 4-17 42-55 (78)
288 cd04728 ThiG Thiazole synthase 30.4 2.8E+02 0.0061 23.5 7.2 86 139-231 104-201 (248)
289 PRK00994 F420-dependent methyl 30.2 2.5E+02 0.0054 23.9 6.7 61 150-217 29-98 (277)
290 PTZ00174 phosphomannomutase; P 28.1 45 0.00097 27.8 2.2 25 3-27 6-30 (247)
291 PF06117 DUF957: Enterobacteri 27.5 30 0.00066 22.7 0.8 16 2-17 24-39 (65)
292 COG3769 Predicted hydrolase (H 26.5 1.2E+02 0.0026 25.5 4.3 29 149-178 36-64 (274)
293 PRK00994 F420-dependent methyl 26.1 1.8E+02 0.004 24.6 5.3 33 144-177 79-111 (277)
294 KOG0206 P-type ATPase [General 26.0 5.2E+02 0.011 27.1 9.5 107 51-178 582-692 (1151)
295 KOG2469 IMP-GMP specific 5'-nu 25.2 34 0.00073 31.1 0.9 15 3-17 28-42 (424)
296 KOG2832 TFIIF-interacting CTD 24.8 2E+02 0.0044 25.9 5.6 68 141-213 216-290 (393)
297 PF06901 FrpC: RTX iron-regula 24.3 38 0.00083 27.6 1.0 12 3-14 59-70 (271)
298 PF08235 LNS2: LNS2 (Lipin/Ned 20.6 4.2E+02 0.0092 20.7 7.4 14 4-17 1-14 (157)
299 PHA03321 tegument protein VP11 20.4 7.9E+02 0.017 23.9 8.8 101 9-128 36-136 (694)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=1.8e-27 Score=197.71 Aligned_cols=171 Identities=25% Similarity=0.371 Sum_probs=129.2
Q ss_pred CCceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCcc
Q 026770 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~ 78 (233)
|.+.|+||+||||+||. +.+..+++.+++.+|.+. ...++.++|.+.+.++ ..+....
T Consensus 3 ~~~~iiFDlDGTL~Ds~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~--~~~~~~~--- 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSA---------------EDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELI--ERLLGEA--- 62 (220)
T ss_pred CCCEEEEeCCCccccCh---------------HHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHH--HHHhccc---
Confidence 45899999999999999 555556666777777773 6778899999999988 6554311
Q ss_pred cccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeE
Q 026770 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l 155 (233)
..+. . .+......+.|.+.|.+.. ...+|||+.++| +++|+++
T Consensus 63 ----------~~~~---~-------------------~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l 108 (220)
T COG0546 63 ----------DEEA---A-------------------AELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKL 108 (220)
T ss_pred ----------cchh---H-------------------HHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeE
Confidence 0000 0 0123334444555554433 468999999999 6899999
Q ss_pred EEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCC
Q 026770 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
+|+||++...++..++++ |+.++|+.++|.++. |+| .++++++.+|+++ +|||||.+|+++|++++
T Consensus 109 ~i~T~k~~~~~~~~l~~~-gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~----l~VGDs~~Di~aA~~Ag- 182 (220)
T COG0546 109 GIVTNKPERELDILLKAL-GLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEA----LMVGDSLNDILAAKAAG- 182 (220)
T ss_pred EEEeCCcHHHHHHHHHHh-CCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhhe----EEECCCHHHHHHHHHcC-
Confidence 999999999999999996 999999999996544 444 3678888887677 99999999999999985
Q ss_pred CcCC
Q 026770 228 LDGW 231 (233)
Q Consensus 228 ~~~~ 231 (233)
+..+
T Consensus 183 ~~~v 186 (220)
T COG0546 183 VPAV 186 (220)
T ss_pred CCEE
Confidence 6543
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=1.1e-27 Score=200.18 Aligned_cols=169 Identities=21% Similarity=0.254 Sum_probs=122.9
Q ss_pred CCceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCcc
Q 026770 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~ 78 (233)
|.++|||||||||+||. +.+..+++++++++|.+. .+.++..+|.+.+..+ +.+++.
T Consensus 11 ~~k~viFD~DGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~~~~---- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSA---------------PDMLATVNAMLAARGRAPITLAQLRPVVSKGARAML--AVAFPE---- 69 (229)
T ss_pred cCCEEEEcCcCccccCH---------------HHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHH--HHHhcc----
Confidence 78999999999999999 334445555666666643 4456667777776665 443221
Q ss_pred cccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeE
Q 026770 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l 155 (233)
.+.+ + ..+....+.+.|.........++||+.++| +++|+++
T Consensus 70 ---------~~~~----------------------~----~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~l 114 (229)
T PRK13226 70 ---------LDAA----------------------A----RDALIPEFLQRYEALIGTQSQLFDGVEGMLQRLECAGCVW 114 (229)
T ss_pred ---------CChH----------------------H----HHHHHHHHHHHHHHhhhhcCeeCCCHHHHHHHHHHCCCeE
Confidence 1100 0 112223333444433344578999999999 6789999
Q ss_pred EEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCC
Q 026770 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
+|+||++...++..++++ |+.++|+.++++++. |+| .++++++++|++| +||||+.+|+++|+++ |
T Consensus 115 ~i~Tn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~----l~IGDs~~Di~aA~~a-G 188 (229)
T PRK13226 115 GIVTNKPEYLARLILPQL-GWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC----VYVGDDERDILAARAA-G 188 (229)
T ss_pred EEECCCCHHHHHHHHHHc-CchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE----EEeCCCHHHHHHHHHC-C
Confidence 999999999999999995 999999999998753 565 4778899999999 9999999999999877 7
Q ss_pred CcCC
Q 026770 228 LDGW 231 (233)
Q Consensus 228 ~~~~ 231 (233)
++.+
T Consensus 189 ~~~i 192 (229)
T PRK13226 189 MPSV 192 (229)
T ss_pred CcEE
Confidence 7653
No 3
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.94 E-value=2.4e-26 Score=194.56 Aligned_cols=181 Identities=12% Similarity=0.064 Sum_probs=121.9
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCcccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (233)
.++|||||||||+||.+..... +++++++++|.+. .+.++..+|.+....+ +.+...
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~--------------a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~--~~~~~~------ 59 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQ--------------AFVEAFAEFGVQITLEEARGPMGLGKWDHI--RALLKM------ 59 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHH--------------HHHHHHHHcCCCccHHHHHHhcCccHHHHH--HHHhcC------
Confidence 3789999999999997322222 3333444555432 3445566777766655 433210
Q ss_pred cccCcCCCCHHHHHHHhhhhHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeE
Q 026770 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSEN--RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l 155 (233)
..+ ...+.+.+|.+ .++ +.+++..|.+.|.+.......++||+.++| +++|+++
T Consensus 60 ----------~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l 118 (253)
T TIGR01422 60 ----------PAV-------AERWRAKFGRLPTEAD----IEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKI 118 (253)
T ss_pred ----------HHH-------HHHHHHHhCCCCCHHH----HHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeE
Confidence 011 11223334432 222 222333444444333345678999999999 6789999
Q ss_pred EEEeCCcHHHHHHHHHHhcCCCCCC-CeEEeCCCC----CHHH----HHHHhcCC-cCccCCceEEEcCChhhHHHHHhC
Q 026770 156 YIVTTKQSRFADALLRELAGVTIPP-DRIYGLGTG----PKVE----VLKQLQKK-PELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~~~~gl~~~f-~~iv~~~~~----pk~~----~l~~l~~~-p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+|+||++...++.+++++ |+.++| +.|+|+++. |+|+ +++++++. |++| +|||||++|+++|+++
T Consensus 119 ~IvT~~~~~~~~~~l~~~-gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~----l~IGDs~~Di~aA~~a 193 (253)
T TIGR01422 119 GSTTGYTREMMDVVAPEA-ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC----VKVGDTVPDIEEGRNA 193 (253)
T ss_pred EEECCCcHHHHHHHHHHH-HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe----EEECCcHHHHHHHHHC
Confidence 999999999999999996 999996 899998764 6654 67788885 8889 9999999999999988
Q ss_pred CCCcCC
Q 026770 226 PELDGW 231 (233)
Q Consensus 226 ~~~~~~ 231 (233)
|++.|
T Consensus 194 -Gi~~i 198 (253)
T TIGR01422 194 -GMWTV 198 (253)
T ss_pred -CCeEE
Confidence 77654
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=1.1e-26 Score=196.39 Aligned_cols=91 Identities=13% Similarity=0.072 Sum_probs=79.7
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPE 203 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~ 203 (233)
.....++||+.++| +++|++++|+||++...++..++++ ||.+||+.|+++++. |+|+ ++++++++|+
T Consensus 104 ~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~ 182 (248)
T PLN02770 104 SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKD 182 (248)
T ss_pred HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChh
Confidence 34578999999999 6889999999999999999999995 999999999999864 5543 6788899999
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+| +||||++.|+++|+++ |++.|
T Consensus 183 ~~----l~vgDs~~Di~aA~~a-Gi~~i 205 (248)
T PLN02770 183 HT----FVFEDSVSGIKAGVAA-GMPVV 205 (248)
T ss_pred HE----EEEcCCHHHHHHHHHC-CCEEE
Confidence 99 9999999999999866 87644
No 5
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.94 E-value=6.6e-27 Score=193.09 Aligned_cols=90 Identities=22% Similarity=0.147 Sum_probs=78.4
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPE 203 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~ 203 (233)
.....++||+.++| +++|++++|+||+....++..++.+ |+.++|+.++++++. |+| .++++++.+|+
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 156 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT-GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPE 156 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHH
Confidence 34568999999999 5789999999999999999999995 999999999998764 555 46777888888
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
++ +||||++.|+++|+++ |++.
T Consensus 157 ~~----~~iGDs~~Di~aa~~a-G~~~ 178 (214)
T PRK13288 157 EA----LMVGDNHHDILAGKNA-GTKT 178 (214)
T ss_pred HE----EEECCCHHHHHHHHHC-CCeE
Confidence 88 9999999999999988 7764
No 6
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.93 E-value=2.5e-26 Score=195.37 Aligned_cols=170 Identities=14% Similarity=0.072 Sum_probs=119.9
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~~ 79 (233)
.++|||||||||+||...++..+|. ++++++|++. .+..+.++|.+....+ +.+++..
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~--------------~~~~~~G~~~~~~e~~~~~~G~~~~~~~--~~l~~~~---- 83 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWR--------------ALAEEEGKRPPPAFLLKRAEGMKNEQAI--SEVLCWS---- 83 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHH--------------HHHHHcCCCCCHHHHHHHhcCCCHHHHH--HHHhccC----
Confidence 3789999999999997444444443 3445556543 3345668888888777 5554310
Q ss_pred ccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEE
Q 026770 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~ 156 (233)
.+.+. .+++. ..+...|.........++||+.++| +++|++++
T Consensus 84 --------~~~~~-------------------~~~l~-------~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~ 129 (260)
T PLN03243 84 --------RDFLQ-------------------MKRLA-------IRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIA 129 (260)
T ss_pred --------CCHHH-------------------HHHHH-------HHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEE
Confidence 01100 01111 1112222111123467999999999 67899999
Q ss_pred EEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 157 IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
|+||++...++..++++ ||.+||+.|+++++. |+| .++++++++|++| +|||||..|+++|+++ |+
T Consensus 130 I~Tn~~~~~~~~~l~~~-gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~----l~IgDs~~Di~aA~~a-G~ 203 (260)
T PLN03243 130 VASTRPRRYLERAIEAV-GMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC----IVFGNSNSSVEAAHDG-CM 203 (260)
T ss_pred EEeCcCHHHHHHHHHHc-CCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe----EEEcCCHHHHHHHHHc-CC
Confidence 99999999999999995 999999999999765 555 4788899999999 9999999999999998 76
Q ss_pred cCC
Q 026770 229 DGW 231 (233)
Q Consensus 229 ~~~ 231 (233)
+.|
T Consensus 204 ~~i 206 (260)
T PLN03243 204 KCV 206 (260)
T ss_pred EEE
Confidence 543
No 7
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.93 E-value=1.1e-25 Score=192.01 Aligned_cols=183 Identities=10% Similarity=0.053 Sum_probs=119.6
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCcccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (233)
.++|||||||||+||....... +++++++++|.+. .+.++..+|.+....+ +.+...
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~--------------a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~--~~~~~~------ 61 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQ--------------AFVEAFAQFGVEITLEEARGPMGLGKWDHI--RALLKM------ 61 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHH--------------HHHHHHHHcCCCCCHHHHHHhcCCCHHHHH--HHHHhc------
Confidence 4899999999999997322122 3334444555433 3345556676665555 333210
Q ss_pred cccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEE
Q 026770 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~I 157 (233)
..+... ..+.+|.+... +...+.+..|.+.|.........++||+.++| +++|++++|
T Consensus 62 ----------~~~~~~-------~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I 122 (267)
T PRK13478 62 ----------PRVAAR-------WQAVFGRLPTE--ADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGS 122 (267)
T ss_pred ----------HHHHHH-------HHHHhCCCCCH--HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 011111 12233432110 11222333444444444455678999999999 678999999
Q ss_pred EeCCcHHHHHHHHHHhcCCCCCC-CeEEeCCCC----CHHH----HHHHhcCC-cCccCCceEEEcCChhhHHHHHhCCC
Q 026770 158 VTTKQSRFADALLRELAGVTIPP-DRIYGLGTG----PKVE----VLKQLQKK-PELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 158 vTn~~~~~~~~~l~~~~gl~~~f-~~iv~~~~~----pk~~----~l~~l~~~-p~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
+||++...++.+++.+ ++.++| +.|+|+++. |+|+ +++++++. |++| +|||||++|+++|+++ |
T Consensus 123 ~T~~~~~~~~~~l~~~-~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~----l~IGDs~~Di~aA~~a-G 196 (267)
T PRK13478 123 TTGYTREMMDVVVPLA-AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC----VKVDDTVPGIEEGLNA-G 196 (267)
T ss_pred EcCCcHHHHHHHHHHH-hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce----EEEcCcHHHHHHHHHC-C
Confidence 9999999999999995 998885 889988764 5554 67788885 5888 9999999999999997 7
Q ss_pred CcCC
Q 026770 228 LDGW 231 (233)
Q Consensus 228 ~~~~ 231 (233)
++.|
T Consensus 197 ~~~i 200 (267)
T PRK13478 197 MWTV 200 (267)
T ss_pred CEEE
Confidence 7654
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.93 E-value=7.8e-26 Score=187.26 Aligned_cols=169 Identities=15% Similarity=0.171 Sum_probs=117.7
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccC-eeeechhHHHHHHHHHhhhCccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRP-VVETGYENLLLVRLLLEIRMPSI 79 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~-~~g~~~~~~~~~~~l~~~~~~~~ 79 (233)
.++|+|||||||+||. +.+..+++++++++|.+. ..+... +.|.+...++ +.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~~~~~---- 59 (220)
T TIGR03351 1 ISLVVLDMAGTTVDED---------------GLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAI--RALLALD---- 59 (220)
T ss_pred CcEEEEecCCCeeccC---------------chHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHH--HHHHhcc----
Confidence 3789999999999999 333344444455555533 223323 6677766666 5544321
Q ss_pred ccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhh-hcCCCCCCHHHHH---hcCCCeE
Q 026770 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWI-GANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~~pgv~~~L---~~~g~~l 155 (233)
|. +.++ ..++...|.+.|...+. ....++||+.++| +++|+++
T Consensus 60 -------~~----------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~ 106 (220)
T TIGR03351 60 -------GA----------------------DEAE----AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKV 106 (220)
T ss_pred -------CC----------------------CHHH----HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEE
Confidence 22 1111 12222333333333322 2458999999999 6789999
Q ss_pred EEEeCCcHHHHHHHHHHhcCCC--CCCCeEEeCCCC----CHHH----HHHHhcCC-cCccCCceEEEcCChhhHHHHHh
Q 026770 156 YIVTTKQSRFADALLRELAGVT--IPPDRIYGLGTG----PKVE----VLKQLQKK-PELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~~~~gl~--~~f~~iv~~~~~----pk~~----~l~~l~~~-p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
+|+||+....++..++++ |+. ++|+.++++++. |+|+ +++++++. |++| +||||++.|+++|++
T Consensus 107 ~ivT~~~~~~~~~~l~~~-~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~----~~igD~~~Di~aa~~ 181 (220)
T TIGR03351 107 ALTTGFDRDTAERLLEKL-GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSV----AVAGDTPNDLEAGIN 181 (220)
T ss_pred EEEeCCchHHHHHHHHHh-hhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHe----EEeCCCHHHHHHHHH
Confidence 999999999999999996 998 999999999764 7665 56777876 6888 999999999999998
Q ss_pred CCCCcC
Q 026770 225 EPELDG 230 (233)
Q Consensus 225 ~~~~~~ 230 (233)
+ |+..
T Consensus 182 a-G~~~ 186 (220)
T TIGR03351 182 A-GAGA 186 (220)
T ss_pred C-CCCe
Confidence 7 7765
No 9
>PRK11587 putative phosphatase; Provisional
Probab=99.93 E-value=2.5e-26 Score=190.45 Aligned_cols=166 Identities=18% Similarity=0.140 Sum_probs=114.1
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHHhhcccCeeeechhHHHHHHHHHhhhCccccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~ 81 (233)
.++|||||||||+||. +.+..+++++++++|++.....+.+.|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL---------------PAVERAWSNWADRHGIAPDEVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCH---------------HHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHH--HHHhc--------
Confidence 4899999999999999 3334455556666666443223334566666655 44422
Q ss_pred ccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEE
Q 026770 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIV 158 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~Iv 158 (233)
+. +.+++.+.+... . .|.........++||+.++| +++|++++|+
T Consensus 58 -----~~----------------------~~~~~~~~~~~~-~----~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----GA----------------------SEAEIQAEFTRL-E----QIEATDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----cC----------------------CcHHHHHHHHHH-H----HHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 11 111222222211 1 12222245678999999999 6889999999
Q ss_pred eCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcC
Q 026770 159 TTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 159 Tn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
||++...+...++.. |+ .+|+.++++++. |+| .+++++++.|++| +|||||+.|+++|+++ |++.
T Consensus 106 Tn~~~~~~~~~l~~~-~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~----l~igDs~~di~aA~~a-G~~~ 178 (218)
T PRK11587 106 TSGSVPVASARHKAA-GL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC----VVVEDAPAGVLSGLAA-GCHV 178 (218)
T ss_pred cCCCchHHHHHHHhc-CC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE----EEEecchhhhHHHHHC-CCEE
Confidence 999988888888884 88 568888888653 554 3678899999999 9999999999999977 7765
Q ss_pred C
Q 026770 231 W 231 (233)
Q Consensus 231 ~ 231 (233)
|
T Consensus 179 i 179 (218)
T PRK11587 179 I 179 (218)
T ss_pred E
Confidence 3
No 10
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=4.3e-26 Score=187.54 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=83.8
Q ss_pred HHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH---
Q 026770 124 DEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE--- 193 (233)
Q Consensus 124 ~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~--- 193 (233)
+.+.+.|.+.......++||+.++| +++|++++|+||++...++..++++ |+.++|+.++|+++. |+|+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~Kp~p~~~~ 148 (213)
T TIGR01449 70 KLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPHPDPLL 148 (213)
T ss_pred HHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CcHhhCcEEEecCCCCCCCCChHHHH
Confidence 3444444444344578999999999 5789999999999999999999995 999999999998764 5554
Q ss_pred -HHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 194 -VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 194 -~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
++++++++|++| +||||+..|+.+|+++ |+..+
T Consensus 149 ~~~~~~~~~~~~~----~~igDs~~d~~aa~~a-G~~~i 182 (213)
T TIGR01449 149 LAAERLGVAPQQM----VYVGDSRVDIQAARAA-GCPSV 182 (213)
T ss_pred HHHHHcCCChhHe----EEeCCCHHHHHHHHHC-CCeEE
Confidence 677888889999 9999999999999987 77643
No 11
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=1.1e-25 Score=199.10 Aligned_cols=169 Identities=12% Similarity=0.057 Sum_probs=122.7
Q ss_pred ceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCcccc
Q 026770 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (233)
++|||||||||+||...++..+|+. +++++|++. ...++.++|.+....+ ..++...
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~--------------l~~e~G~~~~~~e~~~~~~G~~~~~~l--~~ll~~~----- 190 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLT--------------LAQEEGKSPPPAFILRRVEGMKNEQAI--SEVLCWS----- 190 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHH--------------HHHHcCCCCCHHHHHHHhcCCCHHHHH--HHHhhcc-----
Confidence 7899999999999995444444443 233455543 3345678888888877 5554310
Q ss_pred cccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEE
Q 026770 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~I 157 (233)
. +..+ ..++.+.+.+.|.+.......++||+.++| +++|++++|
T Consensus 191 -------~----------------------~~~~----~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaI 237 (381)
T PLN02575 191 -------R----------------------DPAE----LRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMAL 237 (381)
T ss_pred -------C----------------------CHHH----HHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEE
Confidence 0 1111 112222333334333344568999999999 688999999
Q ss_pred EeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCc
Q 026770 158 VTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 229 (233)
Q Consensus 158 vTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~ 229 (233)
+||++...++..++++ ||.+||+.|+++++. |+| .+++++++.|++| +||||+..|++||+++ |++
T Consensus 238 aSn~~~~~~~~~L~~l-gL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peec----l~IGDS~~DIeAAk~A-Gm~ 311 (381)
T PLN02575 238 VSTRPRKTLENAIGSI-GIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERC----IVFGNSNQTVEAAHDA-RMK 311 (381)
T ss_pred EeCCCHHHHHHHHHHc-CCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccE----EEEcCCHHHHHHHHHc-CCE
Confidence 9999999999999995 999999999999875 555 4788899999999 9999999999999988 776
Q ss_pred CC
Q 026770 230 GW 231 (233)
Q Consensus 230 ~~ 231 (233)
.|
T Consensus 312 ~I 313 (381)
T PLN02575 312 CV 313 (381)
T ss_pred EE
Confidence 43
No 12
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=1.8e-25 Score=185.64 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=79.5
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPE 203 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~ 203 (233)
.....++||+.++| +++|++++|+||+....++..++.+ |+..+|+.+++++.. |+| .++++++++|+
T Consensus 88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (222)
T PRK10826 88 EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPL 166 (222)
T ss_pred hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34578999999999 5789999999999999999999995 999999999998764 554 47788899999
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+| +||||+.+|+++|+++ |++.+
T Consensus 167 ~~----~~igDs~~Di~aA~~a-G~~~i 189 (222)
T PRK10826 167 TC----VALEDSFNGMIAAKAA-RMRSI 189 (222)
T ss_pred He----EEEcCChhhHHHHHHc-CCEEE
Confidence 99 9999999999999988 76643
No 13
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=1.6e-25 Score=180.84 Aligned_cols=89 Identities=18% Similarity=0.184 Sum_probs=74.7
Q ss_pred hcCCCCCCHHHHH-h-cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCcc
Q 026770 136 GANRFYPGIPDAL-K-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQ 205 (233)
Q Consensus 136 ~~~~~~pgv~~~L-~-~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~ 205 (233)
....++|++ ++| . +++++++|+||++...++..++++ |+.+||+.|+++++. |+|+ ++++++.+|++|
T Consensus 85 ~~~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~-~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHL-GLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhC-CcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 455788964 777 2 345899999999999999999995 999999999999765 6654 667788888999
Q ss_pred CCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||+..|+++|+++ |++.|
T Consensus 163 ----l~igDs~~di~aA~~a-G~~~i 183 (188)
T PRK10725 163 ----VVFEDADFGIQAARAA-GMDAV 183 (188)
T ss_pred ----EEEeccHhhHHHHHHC-CCEEE
Confidence 9999999999999998 77654
No 14
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=2.2e-25 Score=190.76 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=79.4
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHH----HHHHhcCCcCccC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVE----VLKQLQKKPELQG 206 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~----~l~~l~~~p~~~~ 206 (233)
.....++||+.++| +++|++++|+||+....++..++++ ||.++|+.+++++.. +|++ ++++++++|++|
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~-gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~- 215 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAV- 215 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHE-
Confidence 45678999999999 6789999999999999999999995 999999999888765 5544 566788889999
Q ss_pred CceEEEcCChhhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||+..|+++|+++ |++.|
T Consensus 216 ---l~IGDs~~Di~aA~~A-G~~~I 236 (273)
T PRK13225 216 ---MYVGDETRDVEAARQV-GLIAV 236 (273)
T ss_pred ---EEECCCHHHHHHHHHC-CCeEE
Confidence 9999999999999996 88764
No 15
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.91 E-value=4.3e-25 Score=183.04 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=77.1
Q ss_pred hcCCCCCCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC-eEEeCCC-C---CHHH----HHHHhcCCcCccC
Q 026770 136 GANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPD-RIYGLGT-G---PKVE----VLKQLQKKPELQG 206 (233)
Q Consensus 136 ~~~~~~pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~-~iv~~~~-~---pk~~----~l~~l~~~p~~~~ 206 (233)
....++||+.++|+..+++++|+||++...++..++.+ |+.++|+ .++++++ + |+|+ ++++++++|++|
T Consensus 85 ~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~-~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~- 162 (221)
T PRK10563 85 SELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKT-GMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC- 162 (221)
T ss_pred ccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhc-ChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe-
Confidence 45789999999997778999999999999999999995 9999996 6777754 3 5554 678899999999
Q ss_pred CceEEEcCChhhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||++.|+++|+++ |++.|
T Consensus 163 ---l~igDs~~di~aA~~a-G~~~i 183 (221)
T PRK10563 163 ---ILVDDSSAGAQSGIAA-GMEVF 183 (221)
T ss_pred ---EEEeCcHhhHHHHHHC-CCEEE
Confidence 9999999999999976 77764
No 16
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.91 E-value=8.1e-25 Score=176.08 Aligned_cols=88 Identities=24% Similarity=0.232 Sum_probs=75.2
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCc
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPEL 204 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~ 204 (233)
....++||+.++| +++|++++|+||+ ..++.+++++ |+.++|+.++++++. |+|+ ++++++.+|++
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~-~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL-GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc-ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 3478999999999 5789999999998 5678899995 999999999998654 5543 67788888888
Q ss_pred cCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 205 QGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 205 ~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+ +||||+..|+++|+++ |++.|
T Consensus 162 ~----v~IgD~~~di~aA~~~-G~~~i 183 (185)
T TIGR02009 162 C----VVFEDALAGVQAARAA-GMFAV 183 (185)
T ss_pred e----EEEeCcHhhHHHHHHC-CCeEe
Confidence 9 9999999999999988 77765
No 17
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=1.3e-24 Score=186.19 Aligned_cols=173 Identities=23% Similarity=0.285 Sum_probs=120.1
Q ss_pred CCceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCcc
Q 026770 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~ 78 (233)
|.++|+|||||||+||. +.+..+++++++++|.+. .+.++.++|.+...++ ..+++..
T Consensus 12 ~~k~viFDlDGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~l~~~--- 71 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSV---------------PDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLV--RRALAGS--- 71 (272)
T ss_pred cCCEEEEcCCCccccCH---------------HHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHH--HHHhccc---
Confidence 67999999999999999 333334444555666543 3445667777766655 4433210
Q ss_pred cccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeE
Q 026770 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l 155 (233)
+..++++.+. ..+..+.|.+.|... .....++||+.++| +++|+++
T Consensus 72 --------------------------~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~g~~e~L~~Lk~~g~~l 120 (272)
T PRK13223 72 --------------------------IDHDGVDDEL----AEQALALFMEAYADS-HELTVVYPGVRDTLKWLKKQGVEM 120 (272)
T ss_pred --------------------------ccccCCCHHH----HHHHHHHHHHHHHhc-CcCCccCCCHHHHHHHHHHCCCeE
Confidence 0011122111 112223333333332 23467999999999 5789999
Q ss_pred EEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCC
Q 026770 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
+|+||++...++..++++ |+..+|+.++++++. |+| .++++++++|++| +||||+.+|+++|+++ |
T Consensus 121 ~ivTn~~~~~~~~~l~~~-~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~----l~IGD~~~Di~aA~~a-G 194 (272)
T PRK13223 121 ALITNKPERFVAPLLDQM-KIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS----LFVGDSRSDVLAAKAA-G 194 (272)
T ss_pred EEEECCcHHHHHHHHHHc-CcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE----EEECCCHHHHHHHHHC-C
Confidence 999999999999999995 999999999998754 554 4678889999999 9999999999999997 7
Q ss_pred CcC
Q 026770 228 LDG 230 (233)
Q Consensus 228 ~~~ 230 (233)
++.
T Consensus 195 i~~ 197 (272)
T PRK13223 195 VQC 197 (272)
T ss_pred CeE
Confidence 754
No 18
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.91 E-value=1.4e-24 Score=174.68 Aligned_cols=86 Identities=22% Similarity=0.235 Sum_probs=73.3
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCccC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQG 206 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~ 206 (233)
..++||+.++| +++|++++|+||+.. ....++++ |+..+|+.++++++. |+|+ ++++++++|++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~- 161 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL-GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC- 161 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc-CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe-
Confidence 47999999999 678999999999754 46789995 999999999988654 6654 677888888999
Q ss_pred CceEEEcCChhhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||++.|+++|+++ |++.|
T Consensus 162 ---v~vgD~~~di~aA~~a-G~~~i 182 (185)
T TIGR01990 162 ---IGIEDAQAGIEAIKAA-GMFAV 182 (185)
T ss_pred ---EEEecCHHHHHHHHHc-CCEEE
Confidence 9999999999999988 87765
No 19
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.91 E-value=8.7e-25 Score=181.82 Aligned_cols=171 Identities=19% Similarity=0.207 Sum_probs=118.5
Q ss_pred CCceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCccc
Q 026770 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~ 79 (233)
|.++|||||||||+||+ +.+.++|+++++++|++. .+..+...|.+....+ ..+.....
T Consensus 1 ~~~avIFD~DGvLvDse---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~~--- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSE---------------PLHARAWLEALKEYGIEISDEEIRELHGGGIARII--DLLRKLAA--- 60 (221)
T ss_pred CCcEEEEcCCCCcCcch---------------HHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHH--HHHHHHhc---
Confidence 67999999999999998 444445555666777664 3445555665444444 32222110
Q ss_pred ccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEE
Q 026770 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~ 156 (233)
+.. +.+... ..+.+.. ..........++||+.++| +++|++++
T Consensus 61 -------~~~-------------------~~~~~~----~~~~~~~----~~~~~~~~~~~~pGv~~~l~~L~~~~i~~a 106 (221)
T COG0637 61 -------GED-------------------PADLAE----LERLLYE----AEALELEGLKPIPGVVELLEQLKARGIPLA 106 (221)
T ss_pred -------CCc-------------------ccCHHH----HHHHHHH----HHHhhhcCCCCCccHHHHHHHHHhcCCcEE
Confidence 000 000000 0101111 1112245678999999999 67889999
Q ss_pred EEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 157 IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
++||+++..++..|+.+ |+.+||+.+++++++ |+| .+++++|+.|++| |+|+||+.+++||+++ ||
T Consensus 107 vaS~s~~~~~~~~L~~~-gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~C----vviEDs~~Gi~Aa~aA-Gm 180 (221)
T COG0637 107 VASSSPRRAAERVLARL-GLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEEC----VVVEDSPAGIQAAKAA-GM 180 (221)
T ss_pred EecCChHHHHHHHHHHc-cChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHe----EEEecchhHHHHHHHC-CC
Confidence 99999999999999995 999999999988765 444 4789999999999 9999999999999987 77
Q ss_pred cCC
Q 026770 229 DGW 231 (233)
Q Consensus 229 ~~~ 231 (233)
.-|
T Consensus 181 ~vv 183 (221)
T COG0637 181 RVV 183 (221)
T ss_pred EEE
Confidence 643
No 20
>PLN02940 riboflavin kinase
Probab=99.90 E-value=2.3e-24 Score=192.61 Aligned_cols=166 Identities=15% Similarity=0.096 Sum_probs=116.5
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCcccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (233)
.++|+|||||||+||.. .+..+++++++++|.+. ...+...+|.+....+ ..++..
T Consensus 11 ik~VIFDlDGTLvDt~~---------------~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~--~~~~~~------ 67 (382)
T PLN02940 11 VSHVILDLDGTLLNTDG---------------IVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAA--ATVVED------ 67 (382)
T ss_pred CCEEEECCcCcCCcCHH---------------HHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHH--HHHHHH------
Confidence 37899999999999992 22233344455555433 3335566676666555 444332
Q ss_pred cccCcCCCCHHHHHHHhhhhHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeE
Q 026770 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSEN--RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l 155 (233)
++++ .+++.+.+. +.+.+. .....++||+.++| +++|+++
T Consensus 68 ---------------------------~~~~~~~~~~~~~~~-------~~~~~~-~~~~~l~pGv~elL~~Lk~~g~~l 112 (382)
T PLN02940 68 ---------------------------YGLPCSTDEFNSEIT-------PLLSEQ-WCNIKALPGANRLIKHLKSHGVPM 112 (382)
T ss_pred ---------------------------hCCCCCHHHHHHHHH-------HHHHHH-HccCCCCcCHHHHHHHHHHCCCcE
Confidence 1221 222222222 222222 23568999999999 6889999
Q ss_pred EEEeCCcHHHHHHHHH-HhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCC
Q 026770 156 YIVTTKQSRFADALLR-ELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 156 ~IvTn~~~~~~~~~l~-~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~ 226 (233)
+|+||++...++..++ .+ |+.++|+.|+++++. |+| .++++++++|++| +||||+..|+++|+++
T Consensus 113 ~IvTn~~~~~~~~~l~~~~-gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~----l~VGDs~~Di~aA~~a- 186 (382)
T PLN02940 113 ALASNSPRANIEAKISCHQ-GWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC----LVIEDSLPGVMAGKAA- 186 (382)
T ss_pred EEEeCCcHHHHHHHHHhcc-ChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE----EEEeCCHHHHHHHHHc-
Confidence 9999999999988887 64 999999999999875 554 4778899999999 9999999999999987
Q ss_pred CCcCC
Q 026770 227 ELDGW 231 (233)
Q Consensus 227 ~~~~~ 231 (233)
|++.|
T Consensus 187 Gi~~I 191 (382)
T PLN02940 187 GMEVI 191 (382)
T ss_pred CCEEE
Confidence 77743
No 21
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.90 E-value=2.8e-24 Score=176.30 Aligned_cols=90 Identities=26% Similarity=0.340 Sum_probs=78.6
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCc
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPEL 204 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~ 204 (233)
....++||+.++| +++|++++|+||+....++..++++ |+.++|+.++++++. |+++ ++++++++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 4578999999999 5789999999999999999999995 999999999998764 5554 66778889999
Q ss_pred cCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 205 QGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 205 ~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
| +||||++.|+++|+++ |++.|
T Consensus 151 ~----l~igD~~~Di~aA~~~-Gi~~i 172 (205)
T TIGR01454 151 A----VMVGDAVTDLASARAA-GTATV 172 (205)
T ss_pred e----EEEcCCHHHHHHHHHc-CCeEE
Confidence 9 9999999999999988 77654
No 22
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.90 E-value=5.4e-23 Score=170.15 Aligned_cols=90 Identities=29% Similarity=0.309 Sum_probs=77.8
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCc
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPEL 204 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~ 204 (233)
....++||+.++| +++|++++|+||++...+...++++ |+..+|+.++++++. |+| .++++++++|++
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 3468999999999 5789999999999999999999995 999999999988664 554 377888998889
Q ss_pred cCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 205 QGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 205 ~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
| +|||||+ .|+.+|+++ |++.|
T Consensus 170 ~----~~igDs~~~di~~A~~a-G~~~i 192 (221)
T TIGR02253 170 A----VMVGDRLDKDIKGAKNL-GMKTV 192 (221)
T ss_pred E----EEECCChHHHHHHHHHC-CCEEE
Confidence 9 9999998 899999988 77643
No 23
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=1.2e-23 Score=174.33 Aligned_cols=171 Identities=23% Similarity=0.298 Sum_probs=117.0
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH--hhcccCeeeechhHHHHHHHHHhhhCccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~l~~~~~~~~ 79 (233)
.++|+|||||||+||.+. +..++. .+++++|.+. ...++.++|.+...++ ..++....+
T Consensus 6 ~~~iiFD~DGTL~d~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~-- 66 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPD-LAAAVN--------------AALAALGLPPAGEERVRTWVGNGADVLV--ERALTWAGR-- 66 (226)
T ss_pred CcEEEEcCCcccccCHHH-HHHHHH--------------HHHHHCCCCCCCHHHHHHHhCccHHHHH--HHHHhhccC--
Confidence 489999999999999832 222332 2333344332 3344556676666655 444321100
Q ss_pred ccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEE
Q 026770 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~ 156 (233)
.++ .++ ..+....+.+.|.+.......++||+.++| +++|++++
T Consensus 67 -------~~~----------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ 113 (226)
T PRK13222 67 -------EPD----------------------EEL----LEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLA 113 (226)
T ss_pred -------Ccc----------------------HHH----HHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEE
Confidence 111 111 122233334444444344578999999999 57899999
Q ss_pred EEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 157 IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
|+||+....++.+++++ |+..+|+.+++++.. |+|+ ++++++.+|++| +||||+..|+++|++. |+
T Consensus 114 i~S~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~----i~igD~~~Di~~a~~~-g~ 187 (226)
T PRK13222 114 VVTNKPTPFVAPLLEAL-GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM----LFVGDSRNDIQAARAA-GC 187 (226)
T ss_pred EEeCCCHHHHHHHHHHc-CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe----EEECCCHHHHHHHHHC-CC
Confidence 99999999999999995 999999999988764 5554 778888888888 9999999999999987 77
Q ss_pred cC
Q 026770 229 DG 230 (233)
Q Consensus 229 ~~ 230 (233)
+.
T Consensus 188 ~~ 189 (226)
T PRK13222 188 PS 189 (226)
T ss_pred cE
Confidence 54
No 24
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.90 E-value=1.2e-23 Score=192.46 Aligned_cols=89 Identities=17% Similarity=0.286 Sum_probs=74.4
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC---CHHHHHHHhc--CCcCccCC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---PKVEVLKQLQ--KKPELQGM 207 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~---pk~~~l~~l~--~~p~~~~~ 207 (233)
...++|||+.++| +++|++++|+||++...++..++++ |+.+||+.++++++. |||+.+.... .+|++|
T Consensus 327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~-~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~-- 403 (459)
T PRK06698 327 GKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY-DLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEA-- 403 (459)
T ss_pred cCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC-CcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceE--
Confidence 3568999999999 6889999999999999999999995 999999999999765 6665433221 356778
Q ss_pred ceEEEcCChhhHHHHHhCCCCcC
Q 026770 208 TLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
+||||++.|+++|+++ |++.
T Consensus 404 --v~VGDs~~Di~aAk~A-G~~~ 423 (459)
T PRK06698 404 --AVVGDRLSDINAAKDN-GLIA 423 (459)
T ss_pred --EEEeCCHHHHHHHHHC-CCeE
Confidence 9999999999999887 7754
No 25
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.89 E-value=1.6e-23 Score=171.29 Aligned_cols=87 Identities=20% Similarity=0.183 Sum_probs=73.8
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQG 206 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~ 206 (233)
..++||+.++| +++|++++|+||+... ++..++++ |+..+|+.|+++++. |+| .++++++++|++|
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~-~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~- 180 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEAL-GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEA- 180 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHC-CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHE-
Confidence 47899999999 5789999999998875 47889995 999999999988654 554 3678889999999
Q ss_pred CceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
+||||++ .|+++|+++ |++.|
T Consensus 181 ---~~IgD~~~~Di~~A~~a-G~~~i 202 (203)
T TIGR02252 181 ---LHIGDSLRNDYQGARAA-GWRAL 202 (203)
T ss_pred ---EEECCCchHHHHHHHHc-CCeee
Confidence 9999998 799999876 88765
No 26
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.89 E-value=2.4e-23 Score=169.87 Aligned_cols=82 Identities=18% Similarity=0.095 Sum_probs=71.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC---CHHH----HHHHhcCCcCccCCc
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---PKVE----VLKQLQKKPELQGMT 208 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~---pk~~----~l~~l~~~p~~~~~~ 208 (233)
.+.+++.++| +++|++++|+||++...++..++.+ |+..+|+.++++++. |+|+ ++++++++|++|
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~--- 181 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH-GLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHA--- 181 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc-CchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccE---
Confidence 4566668887 6789999999999999999999995 999999999998775 6554 678889999999
Q ss_pred eEEEcCChhhHHHHHhC
Q 026770 209 LHFVEDRLATLKNVIKE 225 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~~ 225 (233)
+||||++.|+++|+++
T Consensus 182 -i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 182 -AMVGDTVDDIITGRKA 197 (197)
T ss_pred -EEEeCCHHHHHHHHhC
Confidence 9999999999999874
No 27
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.88 E-value=1.8e-22 Score=164.65 Aligned_cols=89 Identities=20% Similarity=0.221 Sum_probs=78.3
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCcc
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQ 205 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~ 205 (233)
...++||+.++| +++|++++|+||++...++..++++ |+.++|+.|+++++. |+| .++++++++|++|
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC-CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 457999999999 5789999999999999999999995 999999999998764 555 4677899999999
Q ss_pred CCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||++.|+.+|+++ ||+.|
T Consensus 169 ----~~vgD~~~Di~~A~~~-G~~~i 189 (198)
T TIGR01428 169 ----LFVASNPWDLGGAKKF-GFKTA 189 (198)
T ss_pred ----EEEeCCHHHHHHHHHC-CCcEE
Confidence 9999999999999876 88765
No 28
>PRK09449 dUMP phosphatase; Provisional
Probab=99.88 E-value=9e-23 Score=169.36 Aligned_cols=91 Identities=19% Similarity=0.176 Sum_probs=75.0
Q ss_pred hhcCCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCc-C
Q 026770 135 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKP-E 203 (233)
Q Consensus 135 ~~~~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p-~ 203 (233)
.....++||+.++|+ ++|++++|+||+....++..++++ |+.++|+.|+++++. |+|+ +++++++.| +
T Consensus 91 ~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~-~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 91 AEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERT-GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred hhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhC-ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 344679999999992 368999999999999999999995 999999999988764 5554 677788654 6
Q ss_pred ccCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
+| +||||++ .|+++|+++ |++.+
T Consensus 170 ~~----~~vgD~~~~Di~~A~~a-G~~~i 193 (224)
T PRK09449 170 RV----LMVGDNLHSDILGGINA-GIDTC 193 (224)
T ss_pred cE----EEEcCCcHHHHHHHHHC-CCcEE
Confidence 78 9999998 699999887 77653
No 29
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.87 E-value=2.5e-22 Score=166.16 Aligned_cols=89 Identities=25% Similarity=0.295 Sum_probs=76.6
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHh-cCCcC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQL-QKKPE 203 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l-~~~p~ 203 (233)
....++||+.++| +++ ++++|+||+....++..++.+ |+..+|+.++++++. |+|+ +++++ +++|+
T Consensus 94 ~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~-~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 171 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS-GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKE 171 (224)
T ss_pred ccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC-CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCch
Confidence 3468999999999 466 999999999999999999995 999999999998663 6654 67788 88999
Q ss_pred ccCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
+| +||||++ .|+.+|+++ |++.+
T Consensus 172 ~~----v~igD~~~~di~~A~~~-G~~~i 195 (224)
T TIGR02254 172 EV----LMIGDSLTADIKGGQNA-GLDTC 195 (224)
T ss_pred he----EEECCCcHHHHHHHHHC-CCcEE
Confidence 99 9999998 799999988 77653
No 30
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.87 E-value=5.3e-22 Score=160.13 Aligned_cols=89 Identities=20% Similarity=0.226 Sum_probs=76.9
Q ss_pred cCCCCCCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC--------CHH----HHHHHhcCCcCc
Q 026770 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------PKV----EVLKQLQKKPEL 204 (233)
Q Consensus 137 ~~~~~pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~--------pk~----~~l~~l~~~p~~ 204 (233)
...++||+.++|+...++++|+||++...+...++.+ |+.++|+.|+++++. |+| .++++++++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRL-GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHc-CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 4579999999996555799999999999999999995 999999999988653 344 367888999999
Q ss_pred cCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 205 QGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 205 ~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
| +||||++.|+++|+++ |++.+
T Consensus 161 ~----l~vgD~~~di~aA~~~-G~~~i 182 (184)
T TIGR01993 161 A----IFFDDSARNIAAAKAL-GMKTV 182 (184)
T ss_pred e----EEEeCCHHHHHHHHHc-CCEEe
Confidence 9 9999999999999988 88765
No 31
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.87 E-value=6.2e-22 Score=164.97 Aligned_cols=89 Identities=16% Similarity=0.092 Sum_probs=78.2
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCc
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPEL 204 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~ 204 (233)
....++||+.++| +++|++++|+||++...++..++++ |+.++|+.|+++++. |+|+ ++++++++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT-GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC-CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4578999999999 6889999999999999999999995 999999999988754 5554 67788999999
Q ss_pred cCCceEEEcCChhhHHHHHhCCCCcC
Q 026770 205 QGMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 205 ~~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
| +||||++.|+++|+++ ||+.
T Consensus 169 ~----l~igDs~~di~aA~~a-G~~~ 189 (224)
T PRK14988 169 T----LFIDDSEPILDAAAQF-GIRY 189 (224)
T ss_pred E----EEEcCCHHHHHHHHHc-CCeE
Confidence 9 9999999999999887 8763
No 32
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.87 E-value=3.8e-22 Score=167.64 Aligned_cols=117 Identities=12% Similarity=0.065 Sum_probs=83.4
Q ss_pred hhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026770 99 KIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 176 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl 176 (233)
.....+++++|++.++......+.+..+. .|.....++||+.++|+ +.+++++|+||++.. ++.+ ||
T Consensus 78 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~-gl 146 (238)
T PRK10748 78 RAIEQAMLDAGLSAEEASAGADAAMINFA-----KWRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELF-GL 146 (238)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHH-----HHhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHC-Cc
Confidence 33455677788775543222222222221 23345789999999992 345999999998865 3674 99
Q ss_pred CCCCCeEEeCCCC----CHHH----HHHHhcCCcCccCCceEEEcCC-hhhHHHHHhCCCCcCC
Q 026770 177 TIPPDRIYGLGTG----PKVE----VLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGW 231 (233)
Q Consensus 177 ~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~~~~l~VGDs-~~dv~aA~~~~~~~~~ 231 (233)
.++|+.|+++++. |+|+ ++++++++|++| +||||+ ..|+.+|+++ |++.+
T Consensus 147 ~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~----~~VGD~~~~Di~~A~~a-G~~~i 205 (238)
T PRK10748 147 GDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI----LHVGDDLTTDVAGAIRC-GMQAC 205 (238)
T ss_pred HHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE----EEEcCCcHHHHHHHHHC-CCeEE
Confidence 9999999988764 6654 567889999999 999999 5999999987 77754
No 33
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.86 E-value=3.1e-22 Score=158.05 Aligned_cols=91 Identities=22% Similarity=0.269 Sum_probs=79.1
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPE 203 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~ 203 (233)
.....++||+.++| +++|++++++||++...++..++++ |+.++|+.++++++. |++ .++++++++|+
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~ 151 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE 151 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc
Confidence 35678999999999 5689999999999999999999995 999999999988654 444 46778899999
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+| +||||++.|+++|++. |+..|
T Consensus 152 ~~----~~vgD~~~d~~~A~~~-G~~~i 174 (176)
T PF13419_consen 152 EI----LFVGDSPSDVEAAKEA-GIKTI 174 (176)
T ss_dssp GE----EEEESSHHHHHHHHHT-TSEEE
T ss_pred eE----EEEeCCHHHHHHHHHc-CCeEE
Confidence 99 9999999999999977 77654
No 34
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.85 E-value=1.1e-21 Score=159.87 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=68.2
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC----CCCeEEeCCCC-CHHH----HHHHhcCCc
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI----PPDRIYGLGTG-PKVE----VLKQLQKKP 202 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~----~f~~iv~~~~~-pk~~----~l~~l~~~p 202 (233)
.....++||+.++| +++ ++++++||++.......++.+ ++.. +|+.+++++.. |||+ ++++++ |
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~-~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~ 145 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF-NLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--D 145 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC-CHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--C
Confidence 45567999999999 344 678899998776665566664 7754 56778887766 7766 666777 6
Q ss_pred CccCCceEEEcCChhhHHHHHhCC-CCcCC
Q 026770 203 ELQGMTLHFVEDRLATLKNVIKEP-ELDGW 231 (233)
Q Consensus 203 ~~~~~~~l~VGDs~~dv~aA~~~~-~~~~~ 231 (233)
+++ +||||+..|+++|+++. |++.+
T Consensus 146 ~~~----v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 146 RVV----CFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred CcE----EEeCCCHHHHHHHHHHHcCCcEE
Confidence 677 99999999999999974 88754
No 35
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.85 E-value=2.4e-20 Score=160.85 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=70.4
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC---CeEEeCCCC----CHHH----HHHHhcCCcC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLGTG----PKVE----VLKQLQKKPE 203 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f---~~iv~~~~~----pk~~----~l~~l~~~p~ 203 (233)
..++||+.++| +++|++++|+||++...+...++.+ +...+| +.+ ++++. |+|+ ++++++++|+
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~-~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~ 220 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL-LGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPS 220 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-ccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChH
Confidence 58999999999 6789999999999999999888874 443444 444 55543 5554 6788899999
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+| +||||++.|+++|+++ |++.|
T Consensus 221 ~~----l~IGDs~~Di~aA~~a-G~~~i 243 (286)
T PLN02779 221 RC----VVVEDSVIGLQAAKAA-GMRCI 243 (286)
T ss_pred HE----EEEeCCHHhHHHHHHc-CCEEE
Confidence 99 9999999999999987 77644
No 36
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.84 E-value=1.4e-21 Score=160.93 Aligned_cols=89 Identities=17% Similarity=0.142 Sum_probs=72.1
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHH--HHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcC
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRF--ADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPE 203 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~--~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~ 203 (233)
...++||+.++| +++|++++|+||+.... ....+..+ ++.++|+.|+++++. |+| .++++++++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 467999999999 57899999999987543 33344554 888999999988653 554 46788899999
Q ss_pred ccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+| +||||+..|+.+|++. |++.|
T Consensus 171 ~~----l~i~D~~~di~aA~~a-G~~~i 193 (211)
T TIGR02247 171 EC----VFLDDLGSNLKPAAAL-GITTI 193 (211)
T ss_pred He----EEEcCCHHHHHHHHHc-CCEEE
Confidence 99 9999999999999988 77765
No 37
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.84 E-value=4.1e-21 Score=189.98 Aligned_cols=172 Identities=20% Similarity=0.222 Sum_probs=116.2
Q ss_pred CceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCcccc
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (233)
.++|||||||||+||+. .+..+++++++++|++. .+.++.++|.+...++ ..+....
T Consensus 75 ikaVIFDlDGTLiDS~~---------------~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~--~~~~~~~----- 132 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSEE---------------PSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFL--GGVASVK----- 132 (1057)
T ss_pred CCEEEECCCCCeEeChH---------------HHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHH--HHHHHhc-----
Confidence 47899999999999992 22233334445555543 3334556666665555 3332210
Q ss_pred cccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEE
Q 026770 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~I 157 (233)
+++ +++.++. ....++.+.+.|... ....++||+.++| +++|++++|
T Consensus 133 ------~l~-------------------~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~I 182 (1057)
T PLN02919 133 ------GVK-------------------GFDPDAA---KKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAV 182 (1057)
T ss_pred ------CCC-------------------CCCHHHH---HHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEE
Confidence 110 0111111 122233333333221 1235899999999 688999999
Q ss_pred EeCCcHHHHHHHHHHhcCCC-CCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 158 VTTKQSRFADALLRELAGVT-IPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 158 vTn~~~~~~~~~l~~~~gl~-~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
+||+....++..++++ |+. .+|+.++++++. |+| ++++++++.|++| +||||++.|+++|+++ ||
T Consensus 183 vSn~~~~~~~~~L~~~-gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~----v~IgDs~~Di~AA~~a-Gm 256 (1057)
T PLN02919 183 ASSADRIKVDANLAAA-GLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSEC----VVIEDALAGVQAARAA-GM 256 (1057)
T ss_pred EeCCcHHHHHHHHHHc-CCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccE----EEEcCCHHHHHHHHHc-CC
Confidence 9999999999999995 996 789999999765 555 4778889999999 9999999999999987 77
Q ss_pred cCC
Q 026770 229 DGW 231 (233)
Q Consensus 229 ~~~ 231 (233)
+.|
T Consensus 257 ~~I 259 (1057)
T PLN02919 257 RCI 259 (1057)
T ss_pred EEE
Confidence 654
No 38
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.83 E-value=1.1e-20 Score=147.96 Aligned_cols=82 Identities=26% Similarity=0.276 Sum_probs=70.4
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC---CHHH----HHHHhcCCcCccC
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---PKVE----VLKQLQKKPELQG 206 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~---pk~~----~l~~l~~~p~~~~ 206 (233)
...++||+.++| +++|++++|+||++...+...++. . +..+|+.++++++. |+|+ ++++++++| +|
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~- 137 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EV- 137 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CE-
Confidence 446789999999 578999999999999999999998 4 78899999988765 5554 677788888 88
Q ss_pred CceEEEcCChhhHHHHHhC
Q 026770 207 MTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~ 225 (233)
+||||++.|+++|+++
T Consensus 138 ---l~iGDs~~Di~aa~~a 153 (154)
T TIGR01549 138 ---LHVGDNLNDIEGARNA 153 (154)
T ss_pred ---EEEeCCHHHHHHHHHc
Confidence 9999999999999886
No 39
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.82 E-value=5.2e-21 Score=152.87 Aligned_cols=79 Identities=20% Similarity=0.224 Sum_probs=70.4
Q ss_pred cCCCCCCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCccCCc
Q 026770 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQGMT 208 (233)
Q Consensus 137 ~~~~~pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~~~~ 208 (233)
...++||+.++|+ +++|+||++...++..++++ |+..+|+.|+++++. |+| .++++++++|++|
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~-~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~--- 159 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQA-GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV--- 159 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHC-CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe---
Confidence 4679999999997 48999999999999999995 999999999998763 555 3778899999999
Q ss_pred eEEEcCChhhHHHHHh
Q 026770 209 LHFVEDRLATLKNVIK 224 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~ 224 (233)
+||||+..|+++|++
T Consensus 160 -l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 160 -LMVAAHQWDLIGARK 174 (175)
T ss_pred -EeEecChhhHHHHhc
Confidence 999999999999986
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.80 E-value=8.6e-19 Score=140.30 Aligned_cols=87 Identities=24% Similarity=0.316 Sum_probs=73.8
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCccC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQG 206 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~ 206 (233)
..++||+.++| +++|++++|+||+.... ...+.++ |+.++|+.++++++. |+|+ ++++++++|++|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~- 160 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEEC- 160 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceE-
Confidence 68999999999 57899999999999888 7777775 999999999987653 5544 677788889999
Q ss_pred CceEEEcCChhhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||++.|+++|++. |++.|
T Consensus 161 ---~~vgD~~~di~aA~~~-G~~~i 181 (183)
T TIGR01509 161 ---LFVDDSPAGIEAAKAA-GMHTV 181 (183)
T ss_pred ---EEEcCCHHHHHHHHHc-CCEEE
Confidence 9999999999999877 77765
No 41
>PLN02811 hydrolase
Probab=99.80 E-value=4.4e-20 Score=153.20 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=72.2
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHH-HHHHhcCCCCCCCeEEeCC--CC----CHHH----HHHHhc--
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADA-LLRELAGVTIPPDRIYGLG--TG----PKVE----VLKQLQ-- 199 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~-~l~~~~gl~~~f~~iv~~~--~~----pk~~----~l~~l~-- 199 (233)
....++||+.++| +++|++++|+||+....... .++. .++.++|+.+++++ +. |+|+ ++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 3568999999999 67899999999998765544 3444 37889999999988 43 5543 667776
Q ss_pred -CCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 200 -KKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 200 -~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
++|++| +||||+..|+++|+++ |++.|
T Consensus 154 ~~~~~~~----v~IgDs~~di~aA~~a-G~~~i 181 (220)
T PLN02811 154 PVDPGKV----LVFEDAPSGVEAAKNA-GMSVV 181 (220)
T ss_pred CCCccce----EEEeccHhhHHHHHHC-CCeEE
Confidence 888999 9999999999999988 66643
No 42
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.78 E-value=9.3e-19 Score=143.06 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=73.7
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCccCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQGM 207 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~~ 207 (233)
.++||+.++| +++|++++|+||++.......+..+.++..+|+.++++++. |+|+ ++++++++|++|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~-- 161 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA-- 161 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe--
Confidence 5899999999 67899999999999887766655423788999999988664 6654 678889999999
Q ss_pred ceEEEcCChhhHHHHHhCCCCcCC
Q 026770 208 TLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||++.|+++|++. |++.+
T Consensus 162 --l~vgD~~~di~aA~~a-G~~~i 182 (199)
T PRK09456 162 --VFFDDNADNIEAANAL-GITSI 182 (199)
T ss_pred --EEeCCCHHHHHHHHHc-CCEEE
Confidence 9999999999999986 88764
No 43
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.76 E-value=5.7e-18 Score=140.45 Aligned_cols=89 Identities=24% Similarity=0.191 Sum_probs=74.5
Q ss_pred cCCCCCCHHHHHh---cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----CHH----HHHHHhcCCcCcc
Q 026770 137 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----PKV----EVLKQLQKKPELQ 205 (233)
Q Consensus 137 ~~~~~pgv~~~L~---~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~----~~l~~l~~~p~~~ 205 (233)
..+++|++.++|+ ++ ++++|+||+....+...++.+ ||.++||.|+++++. |+| .++++++++|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-CChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 4689999999992 34 889999999988999999995 999999999988664 444 3788899999999
Q ss_pred CCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||+..++..+.++.||+++
T Consensus 175 ----l~VgD~~~~di~gA~~~G~~~v 196 (229)
T COG1011 175 ----LFVGDSLENDILGARALGMKTV 196 (229)
T ss_pred ----EEECCChhhhhHHHHhcCcEEE
Confidence 9999999999555555699873
No 44
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.74 E-value=4.1e-18 Score=140.87 Aligned_cols=87 Identities=16% Similarity=0.112 Sum_probs=69.2
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEE-------eC----CCC---CHHH----H
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY-------GL----GTG---PKVE----V 194 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv-------~~----~~~---pk~~----~ 194 (233)
...+++||+.++| +++|++++|+||+....++..++.+ |+..+|+..+ ++ ... ||+. +
T Consensus 82 ~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 82 ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 3467999999999 5789999999999999999999995 9998885321 11 111 4665 4
Q ss_pred HHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 195 l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
+++++.+|++| +||||+.+|+.+|++. |+
T Consensus 161 ~~~~~~~~~~~----i~iGDs~~Di~aa~~a-g~ 189 (219)
T TIGR00338 161 LRKEGISPENT----VAVGDGANDLSMIKAA-GL 189 (219)
T ss_pred HHHcCCCHHHE----EEEECCHHHHHHHHhC-CC
Confidence 55778888889 9999999999999887 54
No 45
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.73 E-value=9.6e-18 Score=136.39 Aligned_cols=85 Identities=15% Similarity=0.033 Sum_probs=68.5
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeC-CCC---C----------HHHH----
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-GTG---P----------KVEV---- 194 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~-~~~---p----------k~~~---- 194 (233)
....++||+.++| +++|++++|+||+....++.+++.+ |+..+|...+.. +.+ | |+++
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 4468999999999 5789999999999999999999996 998887655544 222 2 2233
Q ss_pred HHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 195 l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+++++++|+++ +||||+.+|+.+|+.+
T Consensus 156 ~~~~~~~~~~~----i~iGDs~~D~~~a~~a 182 (201)
T TIGR01491 156 KRELNPSLTET----VAVGDSKNDLPMFEVA 182 (201)
T ss_pred HHHhCCCHHHE----EEEcCCHhHHHHHHhc
Confidence 55667788888 9999999999999987
No 46
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.73 E-value=3.1e-17 Score=131.92 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=72.4
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC-----------------------C-C
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----------------------G-P 190 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~-----------------------~-p 190 (233)
.+++||+.++| +++|++++|+||+....++..++++ |+.++|+.|+|++. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 58999999999 5789999999999999999999995 99999999997532 1 5
Q ss_pred HHHHHHHhcCC-cCccCCceEEEcCChhhHHHHHhC
Q 026770 191 KVEVLKQLQKK-PELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 191 k~~~l~~l~~~-p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
|+++++++..+ |+++ +||||+.+|+.+|+++
T Consensus 150 K~~~~~~~~~~~~~~~----i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHI----IYIGDGVTDVCPAKLS 181 (188)
T ss_pred HHHHHHHHHhhcCceE----EEECCCcchhchHhcC
Confidence 78888888766 7777 9999999999999885
No 47
>PLN02954 phosphoserine phosphatase
Probab=99.73 E-value=2e-17 Score=137.27 Aligned_cols=86 Identities=20% Similarity=0.315 Sum_probs=64.2
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCC--CCCCe---------EEeCCC------C-CHHHHHH
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT--IPPDR---------IYGLGT------G-PKVEVLK 196 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~--~~f~~---------iv~~~~------~-pk~~~l~ 196 (233)
..++||+.++| +++|++++|+||+....++.+++.+ |+. .+|.. +++.+. . ||+++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 46899999999 6889999999999999999999996 996 35642 222211 1 5777666
Q ss_pred HhcCC--cCccCCceEEEcCChhhHHHHHhCCCCc
Q 026770 197 QLQKK--PELQGMTLHFVEDRLATLKNVIKEPELD 229 (233)
Q Consensus 197 ~l~~~--p~~~~~~~l~VGDs~~dv~aA~~~~~~~ 229 (233)
++... .++| +||||+.+|+.+|++ +|++
T Consensus 162 ~~~~~~~~~~~----i~iGDs~~Di~aa~~-~~~~ 191 (224)
T PLN02954 162 HIKKKHGYKTM----VMIGDGATDLEARKP-GGAD 191 (224)
T ss_pred HHHHHcCCCce----EEEeCCHHHHHhhhc-CCCC
Confidence 55432 3456 999999999999554 5665
No 48
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.72 E-value=7.4e-18 Score=141.10 Aligned_cols=90 Identities=9% Similarity=0.047 Sum_probs=69.4
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCC----cHHHHHHHHHHhcCCCCCCCeEEeCCCC--CHHHHHHHhcCCcCcc
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQ 205 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~----~~~~~~~~l~~~~gl~~~f~~iv~~~~~--pk~~~l~~l~~~p~~~ 205 (233)
.....|++++.++| +++|++++|+||+ ....++.+++++ |+.++|+.+++++.. ||++....+. +...+
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~f~~i~~~d~~~~~Kp~~~~~l~-~~~i~ 187 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAMNPVIFAGDKPGQYQYTKTQWIQ-DKNIR 187 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchheeEEECCCCCCCCCCCHHHHHH-hCCCe
Confidence 44557888899999 5889999999998 667888899996 999999999998775 4432222221 22336
Q ss_pred CCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+||||+.+|+.+|+++ |++.|
T Consensus 188 ----i~vGDs~~DI~aAk~A-Gi~~I 208 (237)
T TIGR01672 188 ----IHYGDSDNDITAAKEA-GARGI 208 (237)
T ss_pred ----EEEeCCHHHHHHHHHC-CCCEE
Confidence 9999999999988877 88865
No 49
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.72 E-value=3.9e-17 Score=135.49 Aligned_cols=86 Identities=14% Similarity=0.210 Sum_probs=66.8
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC--CC--CeEEeCCCC----C--------------
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--PP--DRIYGLGTG----P-------------- 190 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~--~f--~~iv~~~~~----p-------------- 190 (233)
....++||+.++| +++|++++|+||+....++.++++ . +.. .+ +..++.+.. |
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 148 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCC 148 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCc
Confidence 4578999999999 689999999999999999999998 4 533 11 222332221 2
Q ss_pred HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 191 k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
|+.++++++..+++| +||||+.+|+.+|+++ |+
T Consensus 149 K~~~l~~~~~~~~~~----i~iGDs~~Di~aa~~A-g~ 181 (219)
T PRK09552 149 KPSLIRKLSDTNDFH----IVIGDSITDLEAAKQA-DK 181 (219)
T ss_pred hHHHHHHhccCCCCE----EEEeCCHHHHHHHHHC-Cc
Confidence 467888888888888 9999999999999865 65
No 50
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.69 E-value=2.5e-17 Score=131.79 Aligned_cols=90 Identities=18% Similarity=0.177 Sum_probs=75.5
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCC-cHHHHHHHHHHhcCCC---------CCCCeEEeCCCC--CH--HHHHHHh
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAGVT---------IPPDRIYGLGTG--PK--VEVLKQL 198 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~-~~~~~~~~l~~~~gl~---------~~f~~iv~~~~~--pk--~~~l~~l 198 (233)
....+|||+.++| +++|++++|+||+ ....++..++.+ |+. ++|+.+++++.. +| +.+++.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 4567999999999 6899999999998 888899999995 998 999999998765 33 4555555
Q ss_pred ------cCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 199 ------QKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 199 ------~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+++|++| +||||++.|+++|+++ |++.+
T Consensus 121 ~~~~~~gl~p~e~----l~VgDs~~di~aA~~a-Gi~~i 154 (174)
T TIGR01685 121 NKVDPSVLKPAQI----LFFDDRTDNVREVWGY-GVTSC 154 (174)
T ss_pred hhcccCCCCHHHe----EEEcChhHhHHHHHHh-CCEEE
Confidence 4788999 9999999999999876 77643
No 51
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.68 E-value=4.7e-17 Score=134.38 Aligned_cols=166 Identities=12% Similarity=0.102 Sum_probs=114.9
Q ss_pred ceeEeecCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHH-hhcccCeeeechhHHHHHHHHHhhhCccccc
Q 026770 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~ 81 (233)
.+++||+||||+||+.-+. .++++.+.++|.+. .+.....+|.+..++. +.+....
T Consensus 11 ~~~lfD~dG~lvdte~~y~---------------~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa--~~~~~~~------ 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYT---------------EAWQELLDRYGKPYPWDVKVKSMGKRTSEAA--RLFVKKL------ 67 (222)
T ss_pred eeEEEecCCcEEecHHHHH---------------HHHHHHHHHcCCCChHHHHHHHcCCCHHHHH--HHHHhhc------
Confidence 6899999999999993332 23334455666532 4445567888877777 5554211
Q ss_pred ccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEE
Q 026770 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIV 158 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~Iv 158 (233)
+. ..+.+++..........+ .....++||+.+++ +..|++++++
T Consensus 68 -----~d--------------------p~s~ee~~~e~~~~~~~~--------~~~~~~~PGa~kLv~~L~~~gip~ala 114 (222)
T KOG2914|consen 68 -----PD--------------------PVSREEFNKEEEEILDRL--------FMNSILMPGAEKLVNHLKNNGIPVALA 114 (222)
T ss_pred -----CC--------------------CCCHHHHHHHHHHHHHHh--------ccccccCCcHHHHHHHHHhCCCCeeEE
Confidence 00 012333333333333222 35678999999999 5789999999
Q ss_pred eCCcHHHHHHHHHHhcCCCCCCCeEEeCC--CC----CHH----HHHHHhcCCc-CccCCceEEEcCChhhHHHHHhCCC
Q 026770 159 TTKQSRFADALLRELAGVTIPPDRIYGLG--TG----PKV----EVLKQLQKKP-ELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 159 Tn~~~~~~~~~l~~~~gl~~~f~~iv~~~--~~----pk~----~~l~~l~~~p-~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
|+.++...+.+++++-++-..|+.++.++ ++ |+| .++++++..| +.| ++++|++.+++||+.+ |
T Consensus 115 t~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~----lVfeds~~Gv~aa~aa-g 189 (222)
T KOG2914|consen 115 TSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKC----LVFEDSPVGVQAAKAA-G 189 (222)
T ss_pred ecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccce----EEECCCHHHHHHHHhc-C
Confidence 99999999999998623778898877732 22 443 4778889888 888 9999999999999987 7
Q ss_pred Cc
Q 026770 228 LD 229 (233)
Q Consensus 228 ~~ 229 (233)
|.
T Consensus 190 m~ 191 (222)
T KOG2914|consen 190 MQ 191 (222)
T ss_pred Ce
Confidence 65
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.64 E-value=5.2e-16 Score=126.91 Aligned_cols=85 Identities=18% Similarity=0.126 Sum_probs=68.1
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEE---------eCCCC---CHHHHHHHhcC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY---------GLGTG---PKVEVLKQLQK 200 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv---------~~~~~---pk~~~l~~l~~ 200 (233)
...+++||+.++| +++ ++++|+||+....++..++++ |+..+|+..+ +.+.. ||..+++.++.
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 4568999999999 566 999999999999999999995 9988886432 22211 45677788877
Q ss_pred CcCccCCceEEEcCChhhHHHHHhCC
Q 026770 201 KPELQGMTLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 201 ~p~~~~~~~l~VGDs~~dv~aA~~~~ 226 (233)
.+++| +|||||.+|+.+++.++
T Consensus 143 ~~~~~----v~iGDs~~D~~~~~aa~ 164 (205)
T PRK13582 143 LGYRV----IAAGDSYNDTTMLGEAD 164 (205)
T ss_pred hCCeE----EEEeCCHHHHHHHHhCC
Confidence 77788 99999999999987764
No 53
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.61 E-value=2.8e-15 Score=124.47 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=76.7
Q ss_pred HHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHh--cCCCCCCCeEEeCCCC--CHH----HH
Q 026770 126 WMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTIPPDRIYGLGTG--PKV----EV 194 (233)
Q Consensus 126 ~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~--~gl~~~f~~iv~~~~~--pk~----~~ 194 (233)
|.+.|.+ .....++|||+.++| +++|++++|+||++...++..++++ .+|.++|+.++....+ |+| .+
T Consensus 83 w~~~Y~~-~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i 161 (220)
T TIGR01691 83 WRQGYES-GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKI 161 (220)
T ss_pred HHHHHhc-CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHH
Confidence 3334433 344568999999999 5889999999999998888888772 1566777776644333 444 47
Q ss_pred HHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 195 l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+++++++|++| +||||+..|++||+++ ||+.+
T Consensus 162 ~~~lgv~p~e~----lfVgDs~~Di~AA~~A-G~~ti 193 (220)
T TIGR01691 162 AGQLGSPPREI----LFLSDIINELDAARKA-GLHTG 193 (220)
T ss_pred HHHhCcChhHE----EEEeCCHHHHHHHHHc-CCEEE
Confidence 88899999999 9999999999999986 88754
No 54
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.60 E-value=1.6e-15 Score=118.35 Aligned_cols=86 Identities=28% Similarity=0.365 Sum_probs=65.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCCCCeEEe----CCCC----CHH
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYG----LGTG----PKV 192 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~---------------~~~~~~l~~~~gl~~~f~~iv~----~~~~----pk~ 192 (233)
.++||+.++| +++|++++|+||++. ..+...++++ |+... ..+++ ++.. |+|
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~-~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVD-GVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCcee-EEEECCCCCCCCCCCCCCCH
Confidence 5799999998 689999999999873 4567788885 88622 12222 2321 665
Q ss_pred H----HHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 193 E----VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 193 ~----~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+ ++++++++|++| +||||+..|+++|++. |++.|
T Consensus 105 ~~~~~~~~~~~~~~~e~----i~IGDs~~Di~~A~~~-Gi~~v 142 (147)
T TIGR01656 105 GLILEALKRLGVDASRS----LVVGDRLRDLQAARNA-GLAAV 142 (147)
T ss_pred HHHHHHHHHcCCChHHE----EEEcCCHHHHHHHHHC-CCCEE
Confidence 4 677788899999 9999999999999766 88765
No 55
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.59 E-value=3.2e-15 Score=114.08 Aligned_cols=81 Identities=23% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCC-cHHHHHHHHHHhcC-------CCCCCCeEEeCCCCCHH----HHHHHhc--CC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAG-------VTIPPDRIYGLGTGPKV----EVLKQLQ--KK 201 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~-~~~~~~~~l~~~~g-------l~~~f~~iv~~~~~pk~----~~l~~l~--~~ 201 (233)
.+|||+.++| +++|++++|+||+ ....+...++.+ + +.++|+.+++++..||| .++++++ +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~-~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF-EDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc-cccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 4788899988 6789999999999 888888889985 8 88999999988766664 4788899 99
Q ss_pred cCccCCceEEEcCChhhHHHHHh
Q 026770 202 PELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 202 p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
|++| +||||++.|+++.++
T Consensus 108 p~~~----l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSI----LFVDDRPDNNEEVDY 126 (128)
T ss_pred cceE----EEECCCHhHHHHHHh
Confidence 9999 999999999988765
No 56
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.58 E-value=7.9e-15 Score=112.02 Aligned_cols=85 Identities=36% Similarity=0.489 Sum_probs=67.1
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCc--------HHHHHHHHHHhcCCCCCCCeEEeCCCC--CHH----HHHHHh-cC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQ--------SRFADALLRELAGVTIPPDRIYGLGTG--PKV----EVLKQL-QK 200 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~--------~~~~~~~l~~~~gl~~~f~~iv~~~~~--pk~----~~l~~l-~~ 200 (233)
.++||+.++| +++|++++|+||++ ...++..++++ |+. |+.++.+... |++ .+++++ ++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVP--IDVLYACPHCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCC--EEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence 4789999988 67899999999999 78888999995 985 3444333322 665 467778 48
Q ss_pred CcCccCCceEEEcC-ChhhHHHHHhCCCCcCC
Q 026770 201 KPELQGMTLHFVED-RLATLKNVIKEPELDGW 231 (233)
Q Consensus 201 ~p~~~~~~~l~VGD-s~~dv~aA~~~~~~~~~ 231 (233)
+|+++ +|||| +..|+.+|+++ |++.|
T Consensus 102 ~~~~~----v~IGD~~~~Di~~A~~~-Gi~~i 128 (132)
T TIGR01662 102 DPEES----VYVGDQDLTDLQAAKRA-GLAFI 128 (132)
T ss_pred Chhhe----EEEcCCCcccHHHHHHC-CCeEE
Confidence 88888 99999 79999999877 87765
No 57
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.57 E-value=1.1e-14 Score=117.35 Aligned_cols=85 Identities=24% Similarity=0.230 Sum_probs=65.6
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCCCCeEEeC-----CC-C---CH
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----GT-G---PK 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~---------------~~~~~~l~~~~gl~~~f~~iv~~-----~~-~---pk 191 (233)
.++||+.++| +++|++++|+||++. ..+...++++ |+ +|+.++.+ +. . |+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC--ccceEEECCCCCCCCCcCCCCC
Confidence 5899999999 678999999999873 3345567774 77 47777643 22 1 66
Q ss_pred H----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 192 V----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 192 ~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
| .++++++++|++| +||||+..|+.+|+++ |+..|
T Consensus 106 p~~~~~~~~~l~~~~~~~----~~VgDs~~Di~~A~~a-G~~~i 144 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGS----PMVGDSLRDLQAAAAA-GVTPV 144 (181)
T ss_pred HHHHHHHHHHcCCChhhE----EEEeCCHHHHHHHHHC-CCeEE
Confidence 5 4677889999999 9999999999999998 66543
No 58
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.57 E-value=2e-14 Score=120.40 Aligned_cols=87 Identities=13% Similarity=0.080 Sum_probs=69.2
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCc----HHHHHHHHHHhcCC--CCCCCeEEeCCCC---CHHHHHHHhcCCc
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQ----SRFADALLRELAGV--TIPPDRIYGLGTG---PKVEVLKQLQKKP 202 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~----~~~~~~~l~~~~gl--~~~f~~iv~~~~~---pk~~~l~~l~~~p 202 (233)
.....|+||+.++| +++|++++++||+. ...++.+++.+ |+ .++|+.+++++.. +|...++++++
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~f~vil~gd~~~K~~K~~~l~~~~i-- 186 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNMNPVIFAGDKPGQYTKTQWLKKKNI-- 186 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccceeEEEcCCCCCCCCHHHHHHhcCC--
Confidence 45578999999999 58899999999954 55677778775 99 8999999988754 34556655443
Q ss_pred CccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 203 ELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 203 ~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+ +||||+..|+.+|+++ |+++|
T Consensus 187 --~----I~IGDs~~Di~aA~~A-Gi~~I 208 (237)
T PRK11009 187 --R----IFYGDSDNDITAAREA-GARGI 208 (237)
T ss_pred --e----EEEcCCHHHHHHHHHc-CCcEE
Confidence 6 9999999999988777 88765
No 59
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.55 E-value=1.2e-14 Score=115.19 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=68.3
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCc---------------HHHHHHHHHHhcCCCCCCCeE-Ee----CCCC----C
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LGTG----P 190 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~---------------~~~~~~~l~~~~gl~~~f~~i-v~----~~~~----p 190 (233)
..++||+.++| +++|++++|+||++ ...+...++.+ |+. |+.+ +| +++. |
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc--eeEEEECCCCCCCCCCCCCC
Confidence 46899999999 68899999999973 55678889995 996 7755 55 3433 6
Q ss_pred HHH----HHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 191 KVE----VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 191 k~~----~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+++ ++++++++|++| +||||+..|+++|+++ |++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~e~----l~IGD~~~Di~~A~~a-Gi~~i 144 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARS----YVIGDRETDMQLAENL-GIRGI 144 (161)
T ss_pred CHHHHHHHHHHcCCCHHHe----EEEeCCHHHHHHHHHC-CCeEE
Confidence 654 566778888888 9999999999999987 88754
No 60
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.55 E-value=3.3e-14 Score=113.24 Aligned_cols=85 Identities=25% Similarity=0.271 Sum_probs=66.8
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHH------------HHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHH
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSR------------FADALLRELAGVTIPPDRIYGLGTG----PKVE----VLK 196 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~------------~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~ 196 (233)
+|||+.++| +++|++++|+||++.. .++..++++ |+. ++.+++++.. |+|+ +++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~--~~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP--IQVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence 789999999 6889999999998863 467788995 984 3566665543 5543 667
Q ss_pred Hhc--CCcCccCCceEEEcCCh--------hhHHHHHhCCCCcCCC
Q 026770 197 QLQ--KKPELQGMTLHFVEDRL--------ATLKNVIKEPELDGWN 232 (233)
Q Consensus 197 ~l~--~~p~~~~~~~l~VGDs~--------~dv~aA~~~~~~~~~~ 232 (233)
+++ ++|+++ +||||+. .|+++|+++ |++.++
T Consensus 120 ~~~~~~~~~~~----v~VGD~~~~~~~~~~~Di~aA~~a-Gi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRS----FYVGDAAGRKLDFSDADIKFAKNL-GLEFKY 160 (166)
T ss_pred HcCCCCCchhc----EEEECCCCCCCCCchhHHHHHHHC-CCCcCC
Confidence 777 788889 9999997 699999988 887654
No 61
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.55 E-value=6.3e-14 Score=115.85 Aligned_cols=84 Identities=11% Similarity=0.177 Sum_probs=65.2
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC---CeEEeCCCC----C--------------HH
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLGTG----P--------------KV 192 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f---~~iv~~~~~----p--------------k~ 192 (233)
...++||+.++| +++|++++|+||+....++.+++.+ +...++ +.+++.+.. | |.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh-CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 468999999999 6789999999999999999999985 554444 233333221 3 34
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.++++++..++.+ +||||+.+|+.+|+.+
T Consensus 147 ~~l~~~~~~~~~~----i~iGDg~~D~~~a~~A 175 (214)
T TIGR03333 147 SLIRKLSEPNDYH----IVIGDSVTDVEAAKQS 175 (214)
T ss_pred HHHHHHhhcCCcE----EEEeCCHHHHHHHHhC
Confidence 6788877777777 9999999999998865
No 62
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.55 E-value=4.9e-14 Score=113.12 Aligned_cols=84 Identities=26% Similarity=0.315 Sum_probs=65.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCCCCeEEeC------------CC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL------------GT 188 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~---------------~~~~~~l~~~~gl~~~f~~iv~~------------~~ 188 (233)
.++||+.++| +++|++++|+||++. ......+..+ ++. |+.++.+ +.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC--ccEEEECCCCCcccccccCCC
Confidence 5899999999 689999999999984 3445567774 765 7776542 11
Q ss_pred C---CHHH----HHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcC
Q 026770 189 G---PKVE----VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 189 ~---pk~~----~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
. |+|+ ++++++++|++| +||||+..|+++|+++ |++.
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~----v~VGDs~~Di~aA~~a-G~~~ 146 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQS----YMVGDKLEDMQAGVAA-KVKT 146 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhE----EEEcCCHHHHHHHHHC-CCcE
Confidence 1 6654 678889999999 9999999999999988 6654
No 63
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.53 E-value=2.3e-15 Score=125.04 Aligned_cols=88 Identities=22% Similarity=0.270 Sum_probs=72.1
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeC-CCC---CHH----HHHHHhcCCcCcc
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-GTG---PKV----EVLKQLQKKPELQ 205 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~-~~~---pk~----~~l~~l~~~p~~~ 205 (233)
...+.+++.++| +++|..++++||..... +..+..+ |+..+||.++.| +.+ |+| .++++++++|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~-~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPL-GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhcc-CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 346778888888 68899999999999775 4888885 999999998866 445 665 4789999999999
Q ss_pred CCceEEEcCChhh-HHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRLAT-LKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~~d-v~aA~~~~~~~~~ 231 (233)
++|||+..+ +++|++. |++++
T Consensus 189 ----vhIgD~l~nD~~gA~~~-G~~ai 210 (237)
T KOG3085|consen 189 ----VHIGDLLENDYEGARNL-GWHAI 210 (237)
T ss_pred ----EEecCccccccHhHHHc-CCEEE
Confidence 999999987 8887766 88775
No 64
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.50 E-value=4.1e-14 Score=123.72 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=67.5
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC-------eEEe----CCCC---CHHH----H
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD-------RIYG----LGTG---PKVE----V 194 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~-------~iv~----~~~~---pk~~----~ 194 (233)
...+++||+.++| ++.|++++|+||+.....+..++++ |+...+. ..++ ++.. ||++ +
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 3468999999998 6899999999999998899999985 9865442 1111 1211 6754 5
Q ss_pred HHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 195 l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
++++++++++| ++|||+.+|+.+++.+ |+
T Consensus 257 a~~lgi~~~qt----IaVGDg~NDl~m~~~A-Gl 285 (322)
T PRK11133 257 AQEYEIPLAQT----VAIGDGANDLPMIKAA-GL 285 (322)
T ss_pred HHHcCCChhhE----EEEECCHHHHHHHHHC-CC
Confidence 66778888999 9999999999999776 44
No 65
>PRK11590 hypothetical protein; Provisional
Probab=99.49 E-value=2.1e-13 Score=112.58 Aligned_cols=82 Identities=11% Similarity=0.087 Sum_probs=59.4
Q ss_pred CCCCCCHHHHH-h---cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC-----C----C------HHHHHH-H
Q 026770 138 NRFYPGIPDAL-K---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----G----P------KVEVLK-Q 197 (233)
Q Consensus 138 ~~~~pgv~~~L-~---~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~-----~----p------k~~~l~-~ 197 (233)
..+|||+.++| + ++|++++|+||++...++.+++.+ |+.. .+.++|++. + | |...++ .
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~ 171 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERK 171 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHH
Confidence 57799999999 2 479999999999999999999995 8643 445555541 1 1 233333 3
Q ss_pred hcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 198 LQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 198 l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
++.+...+ .+-|||.+|+..-.-.
T Consensus 172 ~~~~~~~~----~aY~Ds~~D~pmL~~a 195 (211)
T PRK11590 172 IGTPLRLY----SGYSDSKQDNPLLYFC 195 (211)
T ss_pred hCCCcceE----EEecCCcccHHHHHhC
Confidence 45555566 8999999999875543
No 66
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.45 E-value=7.9e-13 Score=108.59 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=62.4
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCe--EE------eCCC-C---CHHHHHHHhcCC
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IY------GLGT-G---PKVEVLKQLQKK 201 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~--iv------~~~~-~---pk~~~l~~l~~~ 201 (233)
..+++||+.++| ++. .+++|+||+....++.+++.+ |+..+|.. .+ ++.. . +|...++.+...
T Consensus 66 ~i~l~pga~ell~~lk~~-~~~~IVS~~~~~~~~~il~~l-gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL-GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred hCCCCccHHHHHHHHHhC-CeEEEEeCChHHHHHHHHHHc-CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 457999999999 344 599999999999999999996 99988862 22 2211 1 345566655433
Q ss_pred cCccCCceEEEcCChhhHHHHHhC
Q 026770 202 PELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 202 p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..++ ++|||+.+|+.+++.+
T Consensus 144 ~~~~----v~vGDs~nDl~ml~~A 163 (203)
T TIGR02137 144 YYRV----IAAGDSYNDTTMLSEA 163 (203)
T ss_pred CCCE----EEEeCCHHHHHHHHhC
Confidence 3456 9999999999998876
No 67
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.44 E-value=1.3e-12 Score=104.15 Aligned_cols=84 Identities=18% Similarity=0.127 Sum_probs=64.4
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC-C-----------C----CHHHHHH
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-T-----------G----PKVEVLK 196 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~-~-----------~----pk~~~l~ 196 (233)
....++||+.++| +++|++++|+|++....++..++++ |+..+|...+..+ + . .|..+++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 4467899999999 5789999999999999999999996 9987775433321 1 1 3444443
Q ss_pred ----HhcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 197 ----QLQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 197 ----~l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
+.+++++++ +||||+.+|+.+++.
T Consensus 149 ~~~~~~~~~~~~~----~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 149 ELLEESKITLKKI----IAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHHHhCCCHHHE----EEEeCCHHHHHHHhc
Confidence 445566777 999999999999875
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.42 E-value=7e-12 Score=102.21 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=73.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCe-EE
Q 026770 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR-IY 184 (233)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~-iv 184 (233)
|++.+++.....+.++.+. ...++||+.++| +++|++++|+||+....++.+++.+ |+..+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcceEecceE
Confidence 5666665544443333322 236899999999 5789999999999999999999995 99888754 33
Q ss_pred eCCC-------------C-CHHH----HHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 185 GLGT-------------G-PKVE----VLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 185 ~~~~-------------~-pk~~----~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..++ + +|.. .+++.+.++++| +++|||.+|+.+++.+
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~----~~~gDs~~D~~~~~~a 190 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDS----YAYGDSISDLPLLSLV 190 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHc----EeeeCCcccHHHHHhC
Confidence 2111 0 3433 345556777888 9999999999998876
No 69
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.39 E-value=1.5e-12 Score=114.90 Aligned_cols=87 Identities=18% Similarity=0.236 Sum_probs=66.2
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCC---------------cHHHHHHHHHHhcCCCCCCCeE-EeC----CCC----
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YGL----GTG---- 189 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~---------------~~~~~~~~l~~~~gl~~~f~~i-v~~----~~~---- 189 (233)
...+|||+.++| +++|++++|+||+ ....+..+++.+ |+. |+.+ ++. +..
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl~--fd~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GIK--FDEVLICPHFPEDNCSCRK 104 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CCc--eeeEEEeCCcCcccCCCCC
Confidence 357899999999 6889999999996 344566778885 883 7665 442 221
Q ss_pred CHHHH----HHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 190 PKVEV----LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 190 pk~~~----l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
|+|.. +++++..|+++ +||||+..|+++|+++ |++.+
T Consensus 105 P~p~~l~~a~~~l~v~~~~s----vmIGDs~sDi~aAk~a-Gi~~I 145 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLANS----YVIGDRETDVQLAENM-GIKGI 145 (354)
T ss_pred CCHHHHHHHHHHcCCCcccE----EEEcCCHHHHHHHHHC-CCeEE
Confidence 77654 45567778888 9999999999999987 88754
No 70
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.39 E-value=2e-12 Score=97.22 Aligned_cols=88 Identities=28% Similarity=0.312 Sum_probs=69.8
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC--------------------CHH--
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------------------PKV-- 192 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~--------------------pk~-- 192 (233)
..++|++.++| +++|++++|+||+....++..++.+ |+..+|+.+++++.. |++
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 35788888888 5779999999999999999999995 998889988876533 233
Q ss_pred --HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 193 --EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 193 --~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
.+.++++.+++.+ ++|||+..|+.++++. |+.++
T Consensus 102 ~~~~~~~~~~~~~~~----~~igD~~~d~~~~~~~-g~~~i 137 (139)
T cd01427 102 LLAALKLLGVDPEEV----LMVGDSLNDIEMAKAA-GGLGV 137 (139)
T ss_pred HHHHHHHcCCChhhE----EEeCCCHHHHHHHHHc-CCcee
Confidence 3555666666666 9999999999999976 55554
No 71
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.33 E-value=1.2e-12 Score=106.96 Aligned_cols=80 Identities=29% Similarity=0.392 Sum_probs=68.3
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC--C--CH--HHHHHHhcCCcCccCCc
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--G--PK--VEVLKQLQKKPELQGMT 208 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~--~--pk--~~~l~~l~~~p~~~~~~ 208 (233)
.+++|++.++| +++|++++++||.+...+....+.+ || ++.++.++. . || ..+++.++.+++.+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v--- 198 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGEV--- 198 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGGE---
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc-cc---ccccccccccccccchhHHHHHHHHhcCCCEE---
Confidence 37899999999 6889999999999999999999995 99 555454444 4 56 67899999998888
Q ss_pred eEEEcCChhhHHHHHhC
Q 026770 209 LHFVEDRLATLKNVIKE 225 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~~ 225 (233)
+||||+.+|+.|++++
T Consensus 199 -~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 199 -AMVGDGVNDAPALKAA 214 (215)
T ss_dssp -EEEESSGGHHHHHHHS
T ss_pred -EEEccCHHHHHHHHhC
Confidence 9999999999999986
No 72
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.32 E-value=1e-11 Score=100.67 Aligned_cols=91 Identities=20% Similarity=0.212 Sum_probs=72.7
Q ss_pred hhcCCCCCCHHHHH-hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC----------CHHH----HHHHhc
Q 026770 135 IGANRFYPGIPDAL-KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----------PKVE----VLKQLQ 199 (233)
Q Consensus 135 ~~~~~~~pgv~~~L-~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~----------pk~~----~l~~l~ 199 (233)
.+...|-|-.+.+| .-+..+..+.||+.+.-+..+|+++ ||.+.|+.|+|.+.. |.++ +++..|
T Consensus 96 lq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~L-GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~ag 174 (244)
T KOG3109|consen 96 LQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKL-GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAG 174 (244)
T ss_pred HhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHh-ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhC
Confidence 34467778888888 3222338899999999999999996 999999999987643 4444 566677
Q ss_pred CC-cCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 200 KK-PELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 200 ~~-p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+. |..+ +|++||..++++|++- ||+.|
T Consensus 175 i~~p~~t----~FfDDS~~NI~~ak~v-Gl~tv 202 (244)
T KOG3109|consen 175 IDSPRNT----YFFDDSERNIQTAKEV-GLKTV 202 (244)
T ss_pred CCCcCce----EEEcCchhhHHHHHhc-cceeE
Confidence 76 8888 9999999999999988 88765
No 73
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.4e-11 Score=100.45 Aligned_cols=83 Identities=19% Similarity=0.252 Sum_probs=67.6
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC--------C------H----HHHHH
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------P------K----VEVLK 196 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~--------p------k----~~~l~ 196 (233)
.+++||+.+++ +++|++++|+|++....++.+.+.+ |++..+...+..+++ | | .+.++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 68999999999 6899999999999999999999996 999887665444321 1 3 24567
Q ss_pred HhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 197 QLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 197 ~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+++.+++++ +++|||.+|+-+-+..
T Consensus 155 ~~g~~~~~~----~a~gDs~nDlpml~~a 179 (212)
T COG0560 155 ELGIPLEET----VAYGDSANDLPMLEAA 179 (212)
T ss_pred HcCCCHHHe----EEEcCchhhHHHHHhC
Confidence 778888888 9999999999876554
No 74
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.31 E-value=5.8e-12 Score=100.48 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=59.1
Q ss_pred HHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHH----HHHHHhcCCcCccCCceEEEcCChhhHHH
Q 026770 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKV----EVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (233)
Q Consensus 146 ~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~a 221 (233)
..|+++|++++|+||++...++..++++ |+..+|+.+ .||| .++++++++|+++ +||||+.+|+.+
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev----~~iGD~~nDi~~ 113 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRFHEGI-----KKKTEPYAQMLEEMNISDAEV----CYVGDDLVDLSM 113 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEEEecC-----CCCHHHHHHHHHHcCcCHHHE----EEECCCHHHHHH
Confidence 3446789999999999999999999996 999888743 2554 4677888888888 999999999999
Q ss_pred HHhC
Q 026770 222 VIKE 225 (233)
Q Consensus 222 A~~~ 225 (233)
++.+
T Consensus 114 ~~~a 117 (169)
T TIGR02726 114 MKRV 117 (169)
T ss_pred HHHC
Confidence 9886
No 75
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.30 E-value=6.9e-12 Score=109.89 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=69.7
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHH----hcCCCCCCCeEEeCCCCCHH----HHHHHhcCCcCccCCc
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE----LAGVTIPPDRIYGLGTGPKV----EVLKQLQKKPELQGMT 208 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~----~~gl~~~f~~iv~~~~~pk~----~~l~~l~~~p~~~~~~ 208 (233)
+|||+.++| +++|++++|+||++...+...+++ + ++.++|+.+.++- .||+ .+++++++.++++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~f~~~~~~~-~pk~~~i~~~~~~l~i~~~~~--- 106 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAEDFDARSINW-GPKSESLRKIAKKLNLGTDSF--- 106 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHHeeEEEEec-CchHHHHHHHHHHhCCCcCcE---
Confidence 577888887 689999999999999999999998 7 8989999887663 3775 4677889999999
Q ss_pred eEEEcCChhhHHHHHhCC
Q 026770 209 LHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~~~ 226 (233)
+||||++.|+.+++++.
T Consensus 107 -vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 107 -LFIDDNPAERANVKITL 123 (320)
T ss_pred -EEECCCHHHHHHHHHHC
Confidence 99999999999999854
No 76
>PRK06769 hypothetical protein; Validated
Probab=99.28 E-value=5.6e-12 Score=100.99 Aligned_cols=89 Identities=12% Similarity=0.016 Sum_probs=65.8
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHH--------HHHHHHHHhcCCCCCCCeEE-eCCCC----CHH----HHHH
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSR--------FADALLRELAGVTIPPDRIY-GLGTG----PKV----EVLK 196 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~--------~~~~~l~~~~gl~~~f~~iv-~~~~~----pk~----~~l~ 196 (233)
...++||+.++| +++|++++|+||++.. .....++.+ |+.++|..+. +++.. |+| .+++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 346899999999 6789999999998742 133446674 7765543322 33322 655 4677
Q ss_pred HhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 197 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 197 ~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+++.+|++| +||||++.|+++|+++ |++.|
T Consensus 105 ~l~~~p~~~----i~IGD~~~Di~aA~~a-Gi~~i 134 (173)
T PRK06769 105 KHGLDLTQC----AVIGDRWTDIVAAAKV-NATTI 134 (173)
T ss_pred HcCCCHHHe----EEEcCCHHHHHHHHHC-CCeEE
Confidence 888889999 9999999999999988 77765
No 77
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.24 E-value=1.4e-11 Score=96.28 Aligned_cols=86 Identities=16% Similarity=0.054 Sum_probs=73.3
Q ss_pred cCCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCCC-CCCeEEeCCCC--CHH---HHHHHhcCCcCccCCc
Q 026770 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG--PKV---EVLKQLQKKPELQGMT 208 (233)
Q Consensus 137 ~~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~f~~iv~~~~~--pk~---~~l~~l~~~p~~~~~~ 208 (233)
...++||+.++|+ +++++++|+||+.+..++.+++++ ++.. +|+.|+++++. +|| .++++++.+|++|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l-~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~--- 118 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLL-DPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNV--- 118 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHh-CcCCCEeeeEEECccccccCCeEeecHHHcCCChhcE---
Confidence 4578999999992 467999999999999999999996 9965 46999999876 443 4788899999999
Q ss_pred eEEEcCChhhHHHHHhCCCC
Q 026770 209 LHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~~~~~ 228 (233)
+||||++.|+.+|++| |+
T Consensus 119 -i~i~Ds~~~~~aa~~n-gI 136 (148)
T smart00577 119 -IIIDDSPDSWPFHPEN-LI 136 (148)
T ss_pred -EEEECCHHHhhcCccC-EE
Confidence 9999999999999877 44
No 78
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.23 E-value=1.4e-10 Score=96.92 Aligned_cols=88 Identities=17% Similarity=0.270 Sum_probs=66.0
Q ss_pred hcCCCCCCHHHHH----h-cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC-----C-----CH---------
Q 026770 136 GANRFYPGIPDAL----K-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----G-----PK--------- 191 (233)
Q Consensus 136 ~~~~~~pgv~~~L----~-~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~-----~-----pk--------- 191 (233)
..+++.||+.+++ + +.|+.+.|+|.++..+++.+|++. |+.+.|+.|++... + |.
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4678999999999 2 469999999999999999999995 99999999998632 2 21
Q ss_pred -----HHHHHHhcCC---cCccCCceEEEcCChhhHHHHHh
Q 026770 192 -----VEVLKQLQKK---PELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 192 -----~~~l~~l~~~---p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
..+++++... ....-..++||||+.+|+-.+.+
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 2344444322 11223455999999999988765
No 79
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.16 E-value=2e-09 Score=91.91 Aligned_cols=114 Identities=12% Similarity=0.159 Sum_probs=81.8
Q ss_pred HhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHH
Q 026770 96 NWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (233)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~ 172 (233)
+|=.....++..++++.+.+.+.+. .....+.||+.++| +++|++++|+|++....++.+++.
T Consensus 92 eWw~k~~~l~~~~~~~~e~i~~~v~--------------~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~ 157 (277)
T TIGR01544 92 EWWTKSHGLLVQQAFPKAKIKEIVA--------------ESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ 157 (277)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHh--------------hcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH
Confidence 3435566677777777765433322 13578999999999 689999999999999999999999
Q ss_pred hcCCCCCCCeEEe------CCCC------C------HHH-----HHHHhc--CCcCccCCceEEEcCChhhHHHHHhCCC
Q 026770 173 LAGVTIPPDRIYG------LGTG------P------KVE-----VLKQLQ--KKPELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 173 ~~gl~~~f~~iv~------~~~~------p------k~~-----~l~~l~--~~p~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
+ |+.+.+..|++ .+.. | |.+ ..++++ ..++.| ++|||+.+|+.+|..-+.
T Consensus 158 l-gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~v----I~vGDs~~Dl~ma~g~~~ 232 (277)
T TIGR01544 158 A-GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNI----ILLGDSQGDLRMADGVAN 232 (277)
T ss_pred c-CCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceE----EEECcChhhhhHhcCCCc
Confidence 5 99877777733 2211 3 222 334455 567777 999999999999765544
Q ss_pred C
Q 026770 228 L 228 (233)
Q Consensus 228 ~ 228 (233)
.
T Consensus 233 ~ 233 (277)
T TIGR01544 233 V 233 (277)
T ss_pred c
Confidence 3
No 80
>PRK08238 hypothetical protein; Validated
Probab=99.12 E-value=6e-10 Score=102.35 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC------CHHHHHH-HhcCCcCccCC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG------PKVEVLK-QLQKKPELQGM 207 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~------pk~~~l~-~l~~~p~~~~~ 207 (233)
.+++||+.++| +++|++++|+||+++..++.+++++ |+ ||.++|+++. ||++.+. .++ .+.+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~-- 142 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGF-- 142 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCe--
Confidence 45789999999 5899999999999999999999995 87 9999999764 3454443 333 2446
Q ss_pred ceEEEcCChhhHHHHHhCC
Q 026770 208 TLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~~~~ 226 (233)
+|+|||.+|+.+++.+.
T Consensus 143 --~yvGDS~~Dlp~~~~A~ 159 (479)
T PRK08238 143 --DYAGNSAADLPVWAAAR 159 (479)
T ss_pred --eEecCCHHHHHHHHhCC
Confidence 99999999999998875
No 81
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.09 E-value=3.8e-09 Score=87.24 Aligned_cols=81 Identities=14% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCCCCCHHHHH----hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC----C-C----C------HHHHHH-H
Q 026770 138 NRFYPGIPDAL----KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----T-G----P------KVEVLK-Q 197 (233)
Q Consensus 138 ~~~~pgv~~~L----~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~----~-~----p------k~~~l~-~ 197 (233)
..++||+.++| +++|++++||||++...++.+.+.. ++..- +.++|.+ + + | |...++ .
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~-~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~ 170 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS-NFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQK 170 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc-ccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHHH
Confidence 46899999999 2479999999999999999999884 66443 3444543 2 2 2 233333 3
Q ss_pred hcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 198 LQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 198 l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
++.+...+ .+-|||.+|+..-.-
T Consensus 171 ~~~~~~~~----~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 171 IGSPLKLY----SGYSDSKQDNPLLAF 193 (210)
T ss_pred hCCChhhe----EEecCCcccHHHHHh
Confidence 45444556 899999999987543
No 82
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.07 E-value=2.3e-10 Score=99.02 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=74.7
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC-CCCeEEeCC-------C---C-CHH----HHHHHh
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG-------T---G-PKV----EVLKQL 198 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~f~~iv~~~-------~---~-pk~----~~l~~l 198 (233)
..++||+.++| +++|++++|+||++....+..++.+ ++.+ +|+.+++.+ . . |+| ++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 47899999999 5789999999999999999999996 9987 999999987 2 1 544 467777
Q ss_pred cC-CcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 199 QK-KPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 199 ~~-~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
+. .|++| +||||+.+|+++|+++ |+..|
T Consensus 265 ~~~~~~~~----~~vgD~~~d~~~a~~~-Gi~~i 293 (300)
T PHA02530 265 IAPKYDVL----LAVDDRDQVVDMWRRI-GLECW 293 (300)
T ss_pred hccCceEE----EEEcCcHHHHHHHHHh-CCeEE
Confidence 77 57889 9999999999999998 77654
No 83
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.06 E-value=4.3e-11 Score=101.79 Aligned_cols=86 Identities=15% Similarity=0.092 Sum_probs=65.1
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC------C-CHHH----HHHHhcCCcCcc
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT------G-PKVE----VLKQLQKKPELQ 205 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~------~-pk~~----~l~~l~~~p~~~ 205 (233)
.|+++.+.+ +..+.+++|+||++.......+..+ |+..+|+.+.++.. + |+|+ ++++++.+|+++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~-g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL-DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC-CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence 356666655 5678999999999987776666664 88888887765422 2 5543 677888889999
Q ss_pred CCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 206 GMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 206 ~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
+||||+. +|+.+|+++ |++.+
T Consensus 200 ----~~vGD~~~~Di~~a~~~-G~~~i 221 (257)
T TIGR01458 200 ----VMIGDDCRDDVGGAQDC-GMRGI 221 (257)
T ss_pred ----EEECCCcHHHHHHHHHc-CCeEE
Confidence 9999996 899999987 77654
No 84
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.02 E-value=9.9e-10 Score=101.61 Aligned_cols=80 Identities=23% Similarity=0.342 Sum_probs=63.6
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcH------------HHHHHHHHHhcCCCCCCCeEEeCCCC----CHHH----HHH
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLGTG----PKVE----VLK 196 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~------------~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~----~l~ 196 (233)
+|||+.+.| ++.|++++|+||.+. ..+..+++.+ |+. |+.++|.+.. |++. +++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 689999999 688999999999877 3577888885 884 8888887654 6654 445
Q ss_pred Hhc----CCcCccCCceEEEcCChhhHHHHHhCC
Q 026770 197 QLQ----KKPELQGMTLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 197 ~l~----~~p~~~~~~~l~VGDs~~dv~aA~~~~ 226 (233)
+++ ++++++ +||||+..|++++++++
T Consensus 275 ~~~~~~~Id~~~S----~~VGDaagr~~~g~~ag 304 (526)
T TIGR01663 275 EANDGTEIQEDDC----FFVGDAAGRPANGKAAG 304 (526)
T ss_pred hcCcccCCCHHHe----EEeCCcccchHHHHhcC
Confidence 553 677888 99999999999887664
No 85
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.00 E-value=5e-09 Score=89.22 Aligned_cols=84 Identities=15% Similarity=0.204 Sum_probs=62.8
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHH---HHHHHHHHhcCCCCC-CCeEEeCCCC-CHHHHHHHhcCCcCccCC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIP-PDRIYGLGTG-PKVEVLKQLQKKPELQGM 207 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~---~~~~~l~~~~gl~~~-f~~iv~~~~~-pk~~~l~~l~~~p~~~~~ 207 (233)
....++||+.++| +++|++++++||+... .+...|+++ |+... ++.++..++. +|+...+.+.....-+
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Iv-- 191 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQADEEHLLLKKDKSSKESRRQKVQKDYEIV-- 191 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEE--
Confidence 4567999999999 5889999999998744 345788885 99764 5677777655 6766555554444445
Q ss_pred ceEEEcCChhhHHHHHh
Q 026770 208 TLHFVEDRLATLKNVIK 224 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~~ 224 (233)
++|||+..|+.+...
T Consensus 192 --l~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 192 --LLFGDNLLDFDDFFY 206 (266)
T ss_pred --EEECCCHHHhhhhhc
Confidence 999999999977543
No 86
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.99 E-value=9.7e-10 Score=92.52 Aligned_cols=81 Identities=20% Similarity=0.332 Sum_probs=63.8
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHH--HHHHHhcCCCC-CCCeEEeCCCC-CH--HHHHHHhcCCcCccCCc
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFAD--ALLRELAGVTI-PPDRIYGLGTG-PK--VEVLKQLQKKPELQGMT 208 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~--~~l~~~~gl~~-~f~~iv~~~~~-pk--~~~l~~l~~~p~~~~~~ 208 (233)
..++||+.++| +++|++++++||+++.... ..++++ |+.. +|+.|+++... .. ...+++++.+|..+
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~~~--- 98 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADLPEMIISSGEIAVQMILESKKRFDIRNGII--- 98 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccccceEEccHHHHHHHHHhhhhhccCCCceE---
Confidence 45788998888 6789999999999887665 788995 9987 99999998764 21 23345566677778
Q ss_pred eEEEcCChhhHHHHH
Q 026770 209 LHFVEDRLATLKNVI 223 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~ 223 (233)
++|||+..|++...
T Consensus 99 -~~vGd~~~d~~~~~ 112 (242)
T TIGR01459 99 -YLLGHLENDIINLM 112 (242)
T ss_pred -EEeCCcccchhhhc
Confidence 99999998887653
No 87
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.95 E-value=1.7e-09 Score=86.30 Aligned_cols=83 Identities=23% Similarity=0.313 Sum_probs=64.2
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCc-HHHHHHHHHHhcCCCCCCCeEEeCCCCCHH----HHHHHhcCCcCccCCce
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKV----EVLKQLQKKPELQGMTL 209 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~-~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~----~~l~~l~~~p~~~~~~~ 209 (233)
..++||+.++| +++|++++|+||++ ...++..++.+ |+..++ ....|+| .++++++++|+++
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~-gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~---- 111 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL-GIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQV---- 111 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc-CCEEEc-----CCCCCChHHHHHHHHHcCCCHHHE----
Confidence 47899999999 67899999999998 56677777774 775322 1112664 4677888888888
Q ss_pred EEEcCCh-hhHHHHHhCCCCcCC
Q 026770 210 HFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 210 l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
+||||+. .|+.+|+++ |++.|
T Consensus 112 l~IGDs~~~Di~aA~~a-Gi~~i 133 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRN-GSYTI 133 (170)
T ss_pred EEECCcchHHHHHHHHc-CCeEE
Confidence 9999998 699999988 77654
No 88
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.95 E-value=6.6e-09 Score=83.54 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=56.9
Q ss_pred CCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC-----C--------C----HHHHHHHh---
Q 026770 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----G--------P----KVEVLKQL--- 198 (233)
Q Consensus 142 pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~-----~--------p----k~~~l~~l--- 198 (233)
|++.++| +++|++++|+|++....++.+++.+ |+...+ +++.+. . + |..+++++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 4555999 5789999999999999999999985 886532 222211 1 2 88888888
Q ss_pred ---cCCcCccCCceEEEcCChhhHHHHH
Q 026770 199 ---QKKPELQGMTLHFVEDRLATLKNVI 223 (233)
Q Consensus 199 ---~~~p~~~~~~~l~VGDs~~dv~aA~ 223 (233)
+..+..+ ++||||.+|+.+++
T Consensus 169 ~~~~~~~~~~----~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEEDIDPDRV----IAIGDSINDLPMLR 192 (192)
T ss_dssp HHHTHTCCEE----EEEESSGGGHHHHH
T ss_pred hhcCCCCCeE----EEEECCHHHHHHhC
Confidence 4556667 99999999999875
No 89
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.93 E-value=2e-08 Score=79.70 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=64.3
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC--eEEeCCCC-------------------CH
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-------------------PK 191 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~--~iv~~~~~-------------------pk 191 (233)
..+.+-||..+++ ++++++.+|+|++-..++..+++.+ +=.+..+ .|++.++. -|
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~i-vgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGI-VGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhh-ccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 4578899999998 7899999999999999999999986 4222222 23333322 12
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+..+..+..+++.. +|+|||..|+.||+..
T Consensus 149 ~~vI~~l~e~~e~~----fy~GDsvsDlsaakls 178 (220)
T COG4359 149 SSVIHELSEPNESI----FYCGDSVSDLSAAKLS 178 (220)
T ss_pred chhHHHhhcCCceE----EEecCCcccccHhhhh
Confidence 56788887777776 9999999999999853
No 90
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.87 E-value=7.5e-09 Score=84.29 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=44.3
Q ss_pred hcCCCCCCHHHHH---hcCC-CeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC
Q 026770 136 GANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 187 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g-~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~ 187 (233)
..++..||+.+++ ++.| +.+.|+|.++.-+++.+|+++ |+.+.|+.|++..
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~F~~IfTNP 135 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDLFSEIFTNP 135 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHHHHHHhcCC
Confidence 4578999999999 3455 599999999999999999995 9999999998764
No 91
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.87 E-value=1.7e-08 Score=88.73 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=76.2
Q ss_pred hhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcC-------CCCCCCeEEeCCCCCH-----------
Q 026770 133 TWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGTGPK----------- 191 (233)
Q Consensus 133 ~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~g-------l~~~f~~iv~~~~~pk----------- 191 (233)
.....+.++||+.++| +++|++++|+||++...++..++.+.| |.++||.|+++...|.
T Consensus 178 dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 178 NPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred CHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence 3344557899999999 688999999999999999999999436 8999999998764321
Q ss_pred --------------------------HHHHHHhcCCcCccCCceEEEcCChh-hHHHHHhCCCCcCC
Q 026770 192 --------------------------VEVLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGW 231 (233)
Q Consensus 192 --------------------------~~~l~~l~~~p~~~~~~~l~VGDs~~-dv~aA~~~~~~~~~ 231 (233)
.+..+.++.+++++ +||||++. |+.+|++..|++.+
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~v----lYvGD~i~~Di~~~kk~~Gw~Tv 320 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEV----LYFGDHIYGDLLRSKKKRGWRTA 320 (343)
T ss_pred eCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcE----EEECCcchHHHHhhHHhcCcEEE
Confidence 23556677777777 99999876 88889888898765
No 92
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.86 E-value=6.1e-09 Score=82.85 Aligned_cols=83 Identities=20% Similarity=0.260 Sum_probs=56.4
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEe-CCcHHHHHHHHHHhcCCC----------CCCCeEEeCCCCCH----HHHHHH
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVT-TKQSRFADALLRELAGVT----------IPPDRIYGLGTGPK----VEVLKQ 197 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvT-n~~~~~~~~~l~~~~gl~----------~~f~~iv~~~~~pk----~~~l~~ 197 (233)
....+||++.++| +.+|++++++| +..++.++..|+.+ ++. ++|+..--... +| ..+.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g-sK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG-SKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CCECEEEESSS--HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhhcchhheecC-chHHHHHHHHHh
Confidence 3567999999999 67999999999 45677999999996 999 88877433322 34 457778
Q ss_pred hcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 198 LQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 198 l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
.|+++++. +|++|...+++..++
T Consensus 120 tgI~y~eM----lFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 120 TGIPYEEM----LFFDDESRNIEVVSK 142 (169)
T ss_dssp H---GGGE----EEEES-HHHHHHHHT
T ss_pred cCCChhHE----EEecCchhcceeeEe
Confidence 89998888 999999999999886
No 93
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.78 E-value=1.5e-08 Score=86.75 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=40.0
Q ss_pred CCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC
Q 026770 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (233)
Q Consensus 142 pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~ 189 (233)
||+.++| +++|++++|+||+++..+...++++ ||..+|+.|+|+++.
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l-GLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV-KLDRYFDIIISGGHK 198 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc-CCCcccCEEEECCcc
Confidence 4444444 6889999999999999999999995 999999999998764
No 94
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.78 E-value=1.4e-08 Score=79.71 Aligned_cols=73 Identities=18% Similarity=0.222 Sum_probs=60.5
Q ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHH----HHHHHhcCCcCccCCceEEEcCChhhH
Q 026770 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKV----EVLKQLQKKPELQGMTLHFVEDRLATL 219 (233)
Q Consensus 144 v~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv 219 (233)
+.+.|+++|++++|+||++...++..++++ |+..+|+.. .||+ .++++++++|++| +||||+.+|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~----~~vGDs~~D~ 105 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITHLYQGQ-----SNKLIAFSDILEKLALAPENV----AYIGDDLIDW 105 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCEEEecc-----cchHHHHHHHHHHcCCCHHHE----EEECCCHHHH
Confidence 556668899999999999999999999996 998777531 3564 4667788888899 9999999999
Q ss_pred HHHHhCC
Q 026770 220 KNVIKEP 226 (233)
Q Consensus 220 ~aA~~~~ 226 (233)
.+++.++
T Consensus 106 ~~~~~ag 112 (154)
T TIGR01670 106 PVMEKVG 112 (154)
T ss_pred HHHHHCC
Confidence 9998873
No 95
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.72 E-value=1e-07 Score=76.32 Aligned_cols=84 Identities=20% Similarity=0.347 Sum_probs=61.6
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC--C------CCe---EEeCCCC-------CHHHH
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--P------PDR---IYGLGTG-------PKVEV 194 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~--~------f~~---iv~~~~~-------pk~~~ 194 (233)
....+-||++++. +++|.+++++|++-...+..+-+.+ ||.. . |+. ..|.+.. -|+++
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~ 163 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEV 163 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhhhhhheeeeccCCcccccccCCccccCCccHHH
Confidence 4678999999998 6899999999999999999999996 9965 1 211 2222221 35666
Q ss_pred HHHhcC--CcCccCCceEEEcCChhhHHHHHh
Q 026770 195 LKQLQK--KPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 195 l~~l~~--~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
+..+.. ..+.. +||||.-+|++|..-
T Consensus 164 i~~lrk~~~~~~~----~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 164 IALLRKNYNYKTI----VMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHhCCChhee----EEecCCccccccCCc
Confidence 665543 34455 999999999998543
No 96
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.67 E-value=5.2e-08 Score=78.70 Aligned_cols=73 Identities=23% Similarity=0.355 Sum_probs=59.9
Q ss_pred HHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHH----HHHHHhcCCcCccCCceEEEcCChhhHHH
Q 026770 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKV----EVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (233)
Q Consensus 146 ~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~a 221 (233)
..|+++|++++|+||++...++..++.+ |+..+|+ +.+ +|+ .++++++++|+++ +||||+.+|+.+
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~f~---g~~--~k~~~l~~~~~~~gl~~~ev----~~VGDs~~D~~~ 127 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTL-GITHLYQ---GQS--NKLIAFSDLLEKLAIAPEQV----AYIGDDLIDWPV 127 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCceeec---CCC--cHHHHHHHHHHHhCCCHHHE----EEECCCHHHHHH
Confidence 3446789999999999999999999996 9987775 222 453 5778889999999 999999999999
Q ss_pred HHhCCCCc
Q 026770 222 VIKEPELD 229 (233)
Q Consensus 222 A~~~~~~~ 229 (233)
++++ |+.
T Consensus 128 a~~a-G~~ 134 (183)
T PRK09484 128 MEKV-GLS 134 (183)
T ss_pred HHHC-CCe
Confidence 9986 554
No 97
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.66 E-value=7.4e-08 Score=82.53 Aligned_cols=40 Identities=15% Similarity=-0.036 Sum_probs=36.4
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~ 189 (233)
+++|++++|+||+++..++..++.+ |+..+|+.|+|++..
T Consensus 161 kekGikLaIvTNg~Re~v~~~Le~l-gL~~yFDvII~~g~i 200 (303)
T PHA03398 161 KERGCVLVLWSYGNREHVVHSLKET-KLEGYFDIIICGGRK 200 (303)
T ss_pred HHCCCEEEEEcCCChHHHHHHHHHc-CCCccccEEEECCCc
Confidence 6889999999999999999999995 999999999988653
No 98
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.55 E-value=8.1e-08 Score=81.67 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=47.5
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcH-----HHHHHHHHHhcCCCC---CCCeEE-eCCCCCHH----HHHHHhcCCcC
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQS-----RFADALLRELAGVTI---PPDRIY-GLGTGPKV----EVLKQLQKKPE 203 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~-----~~~~~~l~~~~gl~~---~f~~iv-~~~~~pk~----~~l~~l~~~p~ 203 (233)
.++++.+++ +..+..+.++|+... ...+...+.+ ++.. .+..+- ......|+ .++++++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHEL-GLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc-CceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 355555555 345666777777542 2333344443 5431 111111 11111354 46677788888
Q ss_pred ccCCceEEEcCChhhHHHHHhC
Q 026770 204 LQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
++ ++|||+.+|+++++.+
T Consensus 217 e~----i~~GD~~NDi~m~~~a 234 (272)
T PRK10530 217 NV----VAFGDNFNDISMLEAA 234 (272)
T ss_pred He----EEeCCChhhHHHHHhc
Confidence 88 9999999999999886
No 99
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.51 E-value=1.6e-07 Score=88.22 Aligned_cols=81 Identities=20% Similarity=0.311 Sum_probs=68.9
Q ss_pred cCCCCCCHHHHH---hcCC-CeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEE
Q 026770 137 ANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g-~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~V 212 (233)
...++||+.++| +++| ++++|+||++...++..++++ |+.++|..+.. .+|++.+++++..++++ +||
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~f~~~~p---~~K~~~v~~l~~~~~~v----~~v 453 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEVHAELLP---EDKLAIVKELQEEGGVV----AMV 453 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCeeeccCCH---HHHHHHHHHHHHcCCEE----EEE
Confidence 357999999999 6889 999999999999999999996 99877764311 15788999988777777 999
Q ss_pred cCChhhHHHHHhC
Q 026770 213 EDRLATLKNVIKE 225 (233)
Q Consensus 213 GDs~~dv~aA~~~ 225 (233)
||+.+|+.+++++
T Consensus 454 GDg~nD~~al~~A 466 (556)
T TIGR01525 454 GDGINDAPALAAA 466 (556)
T ss_pred ECChhHHHHHhhC
Confidence 9999999999876
No 100
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.49 E-value=2.3e-06 Score=67.99 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=65.5
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHh--cCCCCCCCeEEeCCCCCH------HHHHHHhcCCcCcc
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTIPPDRIYGLGTGPK------VEVLKQLQKKPELQ 205 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~--~gl~~~f~~iv~~~~~pk------~~~l~~l~~~p~~~ 205 (233)
..++||++.+.| +++|++++|.|+++-..++..+.+- .+|..+|+..+-...++| ..++..+|++|.+.
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 458999999999 5899999999999977665544431 134444444433333333 56889999999998
Q ss_pred CCceEEEcCChhhHHHHHhCCCCc
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELD 229 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~ 229 (233)
+|+-|.+..+.||+.. ||+
T Consensus 181 ----lFLSDn~~EL~AA~~v-Gl~ 199 (229)
T COG4229 181 ----LFLSDNPEELKAAAGV-GLA 199 (229)
T ss_pred ----EEecCCHHHHHHHHhc-chh
Confidence 9999999999999987 665
No 101
>PRK10444 UMP phosphatase; Provisional
Probab=98.49 E-value=4.5e-08 Score=82.86 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=29.9
Q ss_pred CHHH----HHHHhcCCcCccCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 190 PKVE----VLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 190 pk~~----~l~~l~~~p~~~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
|+|+ ++++++.+|++| +||||+. +|+.+|+++ |++.+
T Consensus 175 P~~~~~~~~~~~~~~~~~~~----v~IGD~~~tDi~~A~~~-G~~~v 216 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEET----VIVGDNLRTDILAGFQA-GLETI 216 (248)
T ss_pred CCHHHHHHHHHHcCCCcccE----EEECCCcHHHHHHHHHc-CCCEE
Confidence 6654 566778888888 9999997 899999988 77764
No 102
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.48 E-value=2e-07 Score=79.81 Aligned_cols=69 Identities=12% Similarity=-0.002 Sum_probs=45.3
Q ss_pred cCCCeEEEE---eCCcHHHHHHHHHHhcCCC----CCCCeEEeCCCCCH----HHHHHHhcCCc-CccCCceEEEcCChh
Q 026770 150 FASSRIYIV---TTKQSRFADALLRELAGVT----IPPDRIYGLGTGPK----VEVLKQLQKKP-ELQGMTLHFVEDRLA 217 (233)
Q Consensus 150 ~~g~~l~Iv---Tn~~~~~~~~~l~~~~gl~----~~f~~iv~~~~~pk----~~~l~~l~~~p-~~~~~~~l~VGDs~~ 217 (233)
..++...++ |+.....+...++.+ ++. .+|..|+... .| ..+++.+++++ +++ ++|||+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v----~~~GDs~N 218 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKRL-GLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVET----IALGDSPN 218 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHHc-CCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceE----EEEcCChh
Confidence 334444444 444455556666663 664 4455555555 34 34667777888 888 99999999
Q ss_pred hHHHHHhC
Q 026770 218 TLKNVIKE 225 (233)
Q Consensus 218 dv~aA~~~ 225 (233)
|+.+++..
T Consensus 219 Di~m~~~a 226 (273)
T PRK00192 219 DLPMLEAA 226 (273)
T ss_pred hHHHHHhC
Confidence 99999866
No 103
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.46 E-value=3.2e-07 Score=85.81 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=70.0
Q ss_pred cCCCCCCHHHHH---hcCCC-eEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEE
Q 026770 137 ANRFYPGIPDAL---KFASS-RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~-~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~V 212 (233)
..+++||+.++| +++|+ +++++||++...++..++++ |+.++|..+.. .+|++.+++++.+++++ +||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~f~~~~p---~~K~~~i~~l~~~~~~v----~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEVHAELLP---EDKLEIVKELREKYGPV----AMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhhhhccCc---HHHHHHHHHHHhcCCEE----EEE
Confidence 457899999999 68899 99999999999999999996 99888754321 15788999998887778 999
Q ss_pred cCChhhHHHHHhCC
Q 026770 213 EDRLATLKNVIKEP 226 (233)
Q Consensus 213 GDs~~dv~aA~~~~ 226 (233)
||+.+|+.+++++.
T Consensus 432 GDg~nD~~al~~A~ 445 (536)
T TIGR01512 432 GDGINDAPALAAAD 445 (536)
T ss_pred eCCHHHHHHHHhCC
Confidence 99999999999773
No 104
>PLN02645 phosphoglycolate phosphatase
Probab=98.40 E-value=1.8e-06 Score=75.45 Aligned_cols=84 Identities=14% Similarity=0.293 Sum_probs=57.5
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCc---HHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEE
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~V 212 (233)
.++||+.++| +++|++++++||++ .......|+.+ |+...++.|+++.. +-...++..+...... +||
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l-Gi~~~~~~I~ts~~-~~~~~l~~~~~~~~~~----V~v 117 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL-GLNVTEEEIFSSSF-AAAAYLKSINFPKDKK----VYV 117 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC-CCCCChhhEeehHH-HHHHHHHhhccCCCCE----EEE
Confidence 4678888877 57899999999988 44444566775 99877888887753 1223444433333345 888
Q ss_pred cCChhhHHHHHhCCCCc
Q 026770 213 EDRLATLKNVIKEPELD 229 (233)
Q Consensus 213 GDs~~dv~aA~~~~~~~ 229 (233)
+++..+.+.+++. |++
T Consensus 118 iG~~~~~~~l~~~-Gi~ 133 (311)
T PLN02645 118 IGEEGILEELELA-GFQ 133 (311)
T ss_pred EcCHHHHHHHHHC-CCE
Confidence 8898888887655 664
No 105
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.33 E-value=5.9e-07 Score=71.18 Aligned_cols=86 Identities=15% Similarity=0.045 Sum_probs=70.1
Q ss_pred CCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCCC-CCCeEEeCCCC----CH-HHHHHHhcCCcCccCCce
Q 026770 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG----PK-VEVLKQLQKKPELQGMTL 209 (233)
Q Consensus 138 ~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~f~~iv~~~~~----pk-~~~l~~l~~~p~~~~~~~ 209 (233)
+...||+.++|+ .+.+.++|.|++.+.+++.+++.+ +... +|+.+++.+.. |+ ...+..++.+++.+
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~l-dp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~v---- 115 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDIL-DRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKV---- 115 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHH-CcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhE----
Confidence 357899999992 344999999999999999999996 8775 89999888765 33 23566777777888
Q ss_pred EEEcCChhhHHHHHhCCCCc
Q 026770 210 HFVEDRLATLKNVIKEPELD 229 (233)
Q Consensus 210 l~VGDs~~dv~aA~~~~~~~ 229 (233)
|+|||++.++.++.+| |+.
T Consensus 116 IiVDD~~~~~~~~~~N-gI~ 134 (162)
T TIGR02251 116 IIIDNSPYSYSLQPDN-AIP 134 (162)
T ss_pred EEEeCChhhhccCccC-Eee
Confidence 9999999999999888 553
No 106
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.32 E-value=1.3e-06 Score=65.67 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=67.0
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCH----HHHHHHhc------CCc
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPK----VEVLKQLQ------KKP 202 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk----~~~l~~l~------~~p 202 (233)
....+||.+.++| +..|+-++.+|-+....+-..|+.+ ++..||+.++.....-| -.+++.+. ++|
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP 116 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKP 116 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCc
Confidence 3467999999999 6789999999999999999999996 99999999887654312 12344433 455
Q ss_pred CccCCceEEEcCChhhHHHHHhCCC
Q 026770 203 ELQGMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 203 ~~~~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
++. +|++|+..-+.....+.|
T Consensus 117 ~~I----vy~DDR~iH~~~Iwe~~G 137 (164)
T COG4996 117 SEI----VYLDDRRIHFGNIWEYLG 137 (164)
T ss_pred ceE----EEEecccccHHHHHHhcC
Confidence 555 999999887777766655
No 107
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.30 E-value=4.9e-06 Score=66.80 Aligned_cols=86 Identities=27% Similarity=0.310 Sum_probs=63.1
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCc---------------HHHHHHHHHHhcCCCCCCCeEEeCCCC---------C
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRIYGLGTG---------P 190 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~---------------~~~~~~~l~~~~gl~~~f~~iv~~~~~---------p 190 (233)
..+.||+.+.| ++.|++++|+||-+ .......|+.. |. -|+.|+-+... |
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~-gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ-GV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc-CC--ccceEEECCCCCCCCCcccCC
Confidence 45789999988 58999999999932 22344456653 55 57776644321 6
Q ss_pred HH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 191 KV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 191 k~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
++ +++++.+++++.. +||||+..|+++|.+. |++++
T Consensus 107 ~~gm~~~~~~~~~iD~~~s----~~VGD~~~Dlq~a~n~-gi~~~ 146 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRS----YVVGDRLTDLQAAENA-GIKGV 146 (181)
T ss_pred ChHHHHHHHHHhCCCccce----EEecCcHHHHHHHHHC-CCCce
Confidence 64 4677778888888 9999999999999877 76654
No 108
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.26 E-value=2.3e-06 Score=80.50 Aligned_cols=78 Identities=19% Similarity=0.293 Sum_probs=65.3
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHHHHHHhcCCcCccCCceEEEc
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~~l~~l~~~p~~~~~~~l~VG 213 (233)
.+++||+.++| +++|++++++||.++..++..++.+ |+. +++.-.. +|++.+++++.+++++ +|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-----~~~~~~p~~K~~~v~~l~~~~~~v----~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-----VRAEVLPDDKAALIKELQEKGRVV----AMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-----EEccCChHHHHHHHHHHHHcCCEE----EEEe
Confidence 46899999998 6889999999999999999999995 995 2322222 5788899888777788 9999
Q ss_pred CChhhHHHHHhC
Q 026770 214 DRLATLKNVIKE 225 (233)
Q Consensus 214 Ds~~dv~aA~~~ 225 (233)
|+.+|+.+++++
T Consensus 474 Dg~nD~~al~~A 485 (562)
T TIGR01511 474 DGINDAPALAQA 485 (562)
T ss_pred CCCccHHHHhhC
Confidence 999999998876
No 109
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.22 E-value=1.9e-07 Score=78.63 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=62.6
Q ss_pred CCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeE--EeCCCC----CHHH----HHHHhcCC-cCccC
Q 026770 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI--YGLGTG----PKVE----VLKQLQKK-PELQG 206 (233)
Q Consensus 141 ~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~i--v~~~~~----pk~~----~l~~l~~~-p~~~~ 206 (233)
||++.++| +++|+++ |+||++.......+..+ |...+|..+ +|.+.. |+|+ ++++++.. +++|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~-~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~- 216 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY-GAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM- 216 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe-cccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE-
Confidence 67888777 3678997 89999988877667774 887777755 555432 6654 56667654 4578
Q ss_pred CceEEEcCC-hhhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDR-LATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs-~~dv~aA~~~~~~~~~ 231 (233)
+||||+ .+|+.+|+++ |++.+
T Consensus 217 ---~~vGD~~~~Di~~a~~~-G~~~i 238 (242)
T TIGR01459 217 ---LMVGDSFYTDILGANRL-GIDTA 238 (242)
T ss_pred ---EEECCCcHHHHHHHHHC-CCeEE
Confidence 999999 5999999987 77754
No 110
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.22 E-value=2.7e-06 Score=66.03 Aligned_cols=71 Identities=25% Similarity=0.324 Sum_probs=55.5
Q ss_pred HHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC--CHHHHHHHhcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 147 ALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 147 ~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~--pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
+|.+.|++++|+|+.....++...+.+ |+..+| .|..+. --.++++++++.|+++ .||||..+|+-.-++
T Consensus 46 ~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~~---qG~~dK~~a~~~L~~~~~l~~e~~----ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 46 LLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHLY---QGISDKLAAFEELLKKLNLDPEEV----AYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHcCCeEEEEeCCCCHHHHHHHHHc-CCceee---echHhHHHHHHHHHHHhCCCHHHh----hhhcCccccHHHHHH
Confidence 346789999999999999999999996 997554 233331 1146788889999999 999999999976554
Q ss_pred C
Q 026770 225 E 225 (233)
Q Consensus 225 ~ 225 (233)
-
T Consensus 118 v 118 (170)
T COG1778 118 V 118 (170)
T ss_pred c
Confidence 3
No 111
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.20 E-value=1.5e-07 Score=80.88 Aligned_cols=85 Identities=15% Similarity=0.166 Sum_probs=59.4
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHH-HHHHHhcCCCCCCCeEEe---CCC---C-CHHH----HHHHhcCCcCc
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIYG---LGT---G-PKVE----VLKQLQKKPEL 204 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~-~~l~~~~gl~~~f~~iv~---~~~---~-pk~~----~l~~l~~~p~~ 204 (233)
-|+++.++| +++|. ++|+||++..... ..+.. .|+..+|+.+.+ .+. + |+|+ ++++++.+|++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 478888887 45676 8999999875431 22333 366666665542 332 1 6553 67788888999
Q ss_pred cCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 205 QGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 205 ~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
| +||||++ +|+.+|+++ |++++
T Consensus 222 ~----lmIGD~~~tDI~~A~~a-Gi~si 244 (279)
T TIGR01452 222 T----LMVGDRLETDILFGHRC-GMTTV 244 (279)
T ss_pred E----EEECCChHHHHHHHHHc-CCcEE
Confidence 9 9999995 999999986 88764
No 112
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.18 E-value=8.5e-06 Score=68.94 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=46.3
Q ss_pred cCCCeEEEEeCCcHHHHHH--HH-HHhcCCCCCCCeEEeCCCC----CHHH----HHHHhcCCcCccCCceEEEcCCh-h
Q 026770 150 FASSRIYIVTTKQSRFADA--LL-RELAGVTIPPDRIYGLGTG----PKVE----VLKQLQKKPELQGMTLHFVEDRL-A 217 (233)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~--~l-~~~~gl~~~f~~iv~~~~~----pk~~----~l~~l~~~p~~~~~~~l~VGDs~-~ 217 (233)
++|.+ .|+||.+...... .+ .. -.+...++...+.+.. |+|+ +++.++++|+++ +||||++ +
T Consensus 134 ~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~----~~VGD~~~~ 207 (249)
T TIGR01457 134 RKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREET----LMVGDNYLT 207 (249)
T ss_pred HCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccE----EEECCCchh
Confidence 45666 7889977643311 00 01 0111223334444432 6654 667778888888 9999997 8
Q ss_pred hHHHHHhCCCCcCC
Q 026770 218 TLKNVIKEPELDGW 231 (233)
Q Consensus 218 dv~aA~~~~~~~~~ 231 (233)
|+.+|++. |++.+
T Consensus 208 Di~~a~~~-G~~~v 220 (249)
T TIGR01457 208 DIRAGIDA-GIDTL 220 (249)
T ss_pred hHHHHHHc-CCcEE
Confidence 99999988 77654
No 113
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.14 E-value=2.8e-06 Score=70.47 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=42.5
Q ss_pred eEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC---C----CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHH
Q 026770 154 RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT---G----PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNV 222 (233)
Q Consensus 154 ~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~---~----pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA 222 (233)
.+.+.++.....+...++.+ +. .+..+.+... . +|. .+++.++++++++ ++|||+.+|+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~----i~~GD~~NDi~m~ 189 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEEL-GL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV----AAIGDSENDLEMF 189 (230)
T ss_pred eeeecccccHHHHHHHHHHc-CC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE----EEECCchhhHHHH
Confidence 34556666666677777774 54 2322222211 1 353 4667778888888 9999999999999
Q ss_pred HhC
Q 026770 223 IKE 225 (233)
Q Consensus 223 ~~~ 225 (233)
+..
T Consensus 190 ~~a 192 (230)
T PRK01158 190 EVA 192 (230)
T ss_pred Hhc
Confidence 865
No 114
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.10 E-value=7.7e-06 Score=64.20 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CH--HHHHHHhcCCcCccCCceEEE
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PK--VEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk--~~~l~~l~~~p~~~~~~~l~V 212 (233)
..-|.+.+.+ +.+|+++.|+||+.+.-+....+++ |+. +|..+--. ++ ..++++++++|++| +||
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~v~----fi~~A~KP~~~~fr~Al~~m~l~~~~v----vmV 116 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-GVP----FIYRAKKPFGRAFRRALKEMNLPPEEV----VMV 116 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-CCc----eeecccCccHHHHHHHHHHcCCChhHE----EEE
Confidence 4556666666 6899999999999999888888885 774 45444321 23 46899999999999 999
Q ss_pred cCChh-hHHHHHhCCCCcCC
Q 026770 213 EDRLA-TLKNVIKEPELDGW 231 (233)
Q Consensus 213 GDs~~-dv~aA~~~~~~~~~ 231 (233)
||... |+-++.++ |++.|
T Consensus 117 GDqL~TDVlggnr~-G~~tI 135 (175)
T COG2179 117 GDQLFTDVLGGNRA-GMRTI 135 (175)
T ss_pred cchhhhhhhccccc-CcEEE
Confidence 99986 77777776 87754
No 115
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.08 E-value=1.6e-05 Score=66.75 Aligned_cols=37 Identities=27% Similarity=0.397 Sum_probs=27.2
Q ss_pred CHHH----HHHHhcCCcCc-cCCceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 190 PKVE----VLKQLQKKPEL-QGMTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 190 pk~~----~l~~l~~~p~~-~~~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
|++. ++++++.++++ + +||||++ .|+.+|+++ |++.+
T Consensus 189 P~~~~~~~~~~~~~~~~~~~~----~~IGD~~~~Di~~A~~~-G~~~i 231 (236)
T TIGR01460 189 PSPAIYRAALNLLQARPERRD----VMVGDNLRTDILGAKNA-GFDTL 231 (236)
T ss_pred CCHHHHHHHHHHhCCCCccce----EEECCCcHHHHHHHHHC-CCcEE
Confidence 6654 56666665544 4 8999998 799999987 77654
No 116
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.01 E-value=1.5e-05 Score=62.97 Aligned_cols=80 Identities=23% Similarity=0.294 Sum_probs=45.7
Q ss_pred CCCHHHHH---hcCCCeEEEEeCCc---H-----------HHHHHHHHHhcCCCCCCCeEEeCCCC----CHHHHHHHhc
Q 026770 141 YPGIPDAL---KFASSRIYIVTTKQ---S-----------RFADALLRELAGVTIPPDRIYGLGTG----PKVEVLKQLQ 199 (233)
Q Consensus 141 ~pgv~~~L---~~~g~~l~IvTn~~---~-----------~~~~~~l~~~~gl~~~f~~iv~~~~~----pk~~~l~~l~ 199 (233)
.|+|.+.| ++.|+.++|+||-. . ..++.+++.+ ++. +...++.... |++-+++.+.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l-~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL-GIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC-TS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc-CCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 45788887 58899999999841 1 2334456663 664 3333333332 6655555543
Q ss_pred C--------CcCccCCceEEEcCC-----------hhhHHHHHhCCCC
Q 026770 200 K--------KPELQGMTLHFVEDR-----------LATLKNVIKEPEL 228 (233)
Q Consensus 200 ~--------~p~~~~~~~l~VGDs-----------~~dv~aA~~~~~~ 228 (233)
. +.+++ +||||+ ..|..-|.+. |+
T Consensus 108 ~~~~~~~~id~~~S----f~VGDaagr~~~~~d~s~~D~~fA~N~-gi 150 (159)
T PF08645_consen 108 KDYNDGVEIDLANS----FYVGDAAGRSKKKKDFSDSDRKFALNC-GI 150 (159)
T ss_dssp CCTSTT--S-CCC-----EEEESSCHCTB-S--S--HHHHHHHHH-T-
T ss_pred Hhccccccccccce----EEEeccCCCCCcccccChhHHHHHHHc-CC
Confidence 2 34567 999997 5666666655 44
No 117
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.95 E-value=0.00013 Score=60.87 Aligned_cols=81 Identities=19% Similarity=0.128 Sum_probs=56.6
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHH---HHHHHHHhcCCCCCCCeEEeCC--CC-C-----HHHHHHHhcC
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLG--TG-P-----KVEVLKQLQK 200 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~f~~iv~~~--~~-p-----k~~~l~~l~~ 200 (233)
....++.|++.+++ +++|++++++||++... +...|.+. |+..+ +.++-.. +. + |.+..+++..
T Consensus 116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~-G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~ 193 (229)
T TIGR01675 116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA-GFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLME 193 (229)
T ss_pred cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc-CCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHh
Confidence 34568999999999 58899999999999766 66777784 88765 6555432 22 2 3344444433
Q ss_pred C-cCccCCceEEEcCChhhHHH
Q 026770 201 K-PELQGMTLHFVEDRLATLKN 221 (233)
Q Consensus 201 ~-p~~~~~~~l~VGDs~~dv~a 221 (233)
+ ..-. ..|||..+|+..
T Consensus 194 ~GYrIv----~~iGDq~sDl~G 211 (229)
T TIGR01675 194 EGYRIW----GNIGDQWSDLLG 211 (229)
T ss_pred CCceEE----EEECCChHHhcC
Confidence 3 3334 789999999965
No 118
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.91 E-value=1.6e-05 Score=78.20 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=66.2
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHHHHHHhcCCcCccCCceEEEc
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~~l~~l~~~p~~~~~~~l~VG 213 (233)
.+++||+.+.| ++.|++++++|+.+...++.+.+.+ |+.++|..+ .. +|.+++++++.+++++ +|||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~~~~~~----~p~~K~~~i~~l~~~~~~v----~~vG 719 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDEVIAGV----LPDGKAEAIKRLQSQGRQV----AMVG 719 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCEEEeCC----CHHHHHHHHHHHhhcCCEE----EEEe
Confidence 36789999998 6889999999999999999999995 997544321 11 5788999998887777 9999
Q ss_pred CChhhHHHHHhC
Q 026770 214 DRLATLKNVIKE 225 (233)
Q Consensus 214 Ds~~dv~aA~~~ 225 (233)
|+.+|+.+++++
T Consensus 720 Dg~nD~~al~~A 731 (834)
T PRK10671 720 DGINDAPALAQA 731 (834)
T ss_pred CCHHHHHHHHhC
Confidence 999999998876
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.84 E-value=3e-05 Score=63.95 Aligned_cols=65 Identities=12% Similarity=0.032 Sum_probs=41.4
Q ss_pred eEEEEeCCcHHHHHHHHHHhcCCCCCCCeE-------EeCCCCCHH----HHHHHhcCCcCccCCceEEEcCChhhHHHH
Q 026770 154 RIYIVTTKQSRFADALLRELAGVTIPPDRI-------YGLGTGPKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNV 222 (233)
Q Consensus 154 ~l~IvTn~~~~~~~~~l~~~~gl~~~f~~i-------v~~~~~pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA 222 (233)
...+.+....+.+...++.+ ++. +... +.....+|. .++++++++++++ ++|||+.+|+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~----i~~GD~~NDi~m~ 181 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKEL-GLN--LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGET----LVCGDSENDIDLF 181 (225)
T ss_pred eEEEeecCCHHHHHHHHHhc-Cce--EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHE----EEECCCHhhHHHH
Confidence 34555655666677777774 653 1111 011111453 4566778888888 9999999999999
Q ss_pred HhC
Q 026770 223 IKE 225 (233)
Q Consensus 223 ~~~ 225 (233)
+..
T Consensus 182 ~~a 184 (225)
T TIGR01482 182 EVP 184 (225)
T ss_pred Hhc
Confidence 876
No 120
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.84 E-value=8.1e-05 Score=63.95 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=35.6
Q ss_pred hcCCCeEEEEeCCc---HHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCC
Q 026770 149 KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDR 215 (233)
Q Consensus 149 ~~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs 215 (233)
+++|++++++||++ +......++.+ |+....+.|+++... -...+++.......+ ++||+.
T Consensus 31 ~~~g~~~~~~Tnns~~~~~~~~~~l~~~-G~~~~~~~i~ts~~~-~~~~l~~~~~~~~~v----~~iG~~ 94 (279)
T TIGR01452 31 ARAGKAALFVTNNSTKSRAEYALKFARL-GFNGLAEQLFSSALC-AARLLRQPPDAPKAV----YVIGEE 94 (279)
T ss_pred HHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCChhhEecHHHH-HHHHHHhhCcCCCEE----EEEcCH
Confidence 56799999999965 44444577885 886555556554321 122333322222344 889975
No 121
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.82 E-value=0.00014 Score=63.83 Aligned_cols=24 Identities=13% Similarity=0.001 Sum_probs=19.1
Q ss_pred CceEEEcCCh-hhHHHHHhCCCCcCC
Q 026770 207 MTLHFVEDRL-ATLKNVIKEPELDGW 231 (233)
Q Consensus 207 ~~~l~VGDs~-~dv~aA~~~~~~~~~ 231 (233)
++++||||++ +|+.+|++. |++++
T Consensus 264 ~~~~mIGD~~~tDI~ga~~~-G~~si 288 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQNY-GWFSC 288 (321)
T ss_pred heEEEEcCChhhhhhhHHhC-CceEE
Confidence 3459999998 889888876 88764
No 122
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.78 E-value=6.3e-05 Score=59.23 Aligned_cols=83 Identities=16% Similarity=0.154 Sum_probs=61.2
Q ss_pred hcCCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCC-CCC-CeEEeCCCC--CHHHHHHH-hcCCcCccCCc
Q 026770 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGTG--PKVEVLKQ-LQKKPELQGMT 208 (233)
Q Consensus 136 ~~~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~f-~~iv~~~~~--pk~~~l~~-l~~~p~~~~~~ 208 (233)
..+.++||+.++|+ ++++.++|+||+.+.++..+++.+ +.. .+| +.|++.++. +...-+.. ++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~l-dp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~~~v--- 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLI-DPDGKYFGDRIISRDESGSPHTKSLLRLFPADESMV--- 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHh-CcCCCeeccEEEEeccCCCCccccHHHHcCCCcccE---
Confidence 34678999999992 456999999999999999999996 988 488 678887653 32222322 34455566
Q ss_pred eEEEcCChhhHHHHH
Q 026770 209 LHFVEDRLATLKNVI 223 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~ 223 (233)
++|+|++.-.....
T Consensus 131 -vivDd~~~~~~~~~ 144 (156)
T TIGR02250 131 -VIIDDREDVWPWHK 144 (156)
T ss_pred -EEEeCCHHHhhcCc
Confidence 99999996554443
No 123
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.75 E-value=3.1e-05 Score=62.80 Aligned_cols=76 Identities=17% Similarity=0.161 Sum_probs=43.7
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHH-------HHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCc
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSR-------FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPEL 204 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~-------~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~ 204 (233)
....+|+||+.++| .+.|+.+.++|+.+.. .....+++++|...+-+.+++.+ |. .++ .
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~----~v~----~ 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT----LVG----G 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG----GC------
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC----eEe----c
Confidence 45678999999999 4778777777766533 33455665323322234555543 31 111 2
Q ss_pred cCCceEEEcCChhhHHHHHhC
Q 026770 205 QGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 205 ~~~~~l~VGDs~~dv~aA~~~ 225 (233)
. ++|+|++.++..+...
T Consensus 138 D----vlIDD~~~n~~~~~~~ 154 (191)
T PF06941_consen 138 D----VLIDDRPHNLEQFANA 154 (191)
T ss_dssp S----EEEESSSHHHSS-SSE
T ss_pred c----EEecCChHHHHhccCC
Confidence 3 8999999999887554
No 124
>PLN02645 phosphoglycolate phosphatase
Probab=97.72 E-value=6.2e-06 Score=72.04 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=55.0
Q ss_pred hcCCCeEEEEeCCcHHH-HHHHHHHhcCCCCCCCeEEeCCCC-------CHHH----HHHHhcCCcCccCCceEEEcCCh
Q 026770 149 KFASSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLGTG-------PKVE----VLKQLQKKPELQGMTLHFVEDRL 216 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~-~~~~l~~~~gl~~~f~~iv~~~~~-------pk~~----~l~~l~~~p~~~~~~~l~VGDs~ 216 (233)
+.++-.++|+||++... ....+.. +|+..+|+.+.++... |+|. ++++++++++++ +||||++
T Consensus 183 ~~~~g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~----~~VGD~~ 257 (311)
T PLN02645 183 RENPGCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQI----CMVGDRL 257 (311)
T ss_pred hcCCCCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccE----EEEcCCc
Confidence 33345789999999754 2333344 3777788877765432 5544 567778888888 9999997
Q ss_pred -hhHHHHHhCCCCcCC
Q 026770 217 -ATLKNVIKEPELDGW 231 (233)
Q Consensus 217 -~dv~aA~~~~~~~~~ 231 (233)
+|+.+|+++ |++.+
T Consensus 258 ~~Di~~A~~a-G~~~i 272 (311)
T PLN02645 258 DTDILFGQNG-GCKTL 272 (311)
T ss_pred HHHHHHHHHc-CCCEE
Confidence 999999988 77764
No 125
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.71 E-value=7.2e-05 Score=62.59 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=53.5
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHH---HHHHHHHHhcCCCCCCCeEEeC-CCC-C------HHHHHHHhcCC-
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGL-GTG-P------KVEVLKQLQKK- 201 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~---~~~~~l~~~~gl~~~f~~iv~~-~~~-p------k~~~l~~l~~~- 201 (233)
..++.||+.+++ +++|+.++++||++.. .....|.+. |+...-..++-. .+. + |....+.+..+
T Consensus 113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~-G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA-GFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH-TTSTBSCGEEEEESSTSS------SHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc-CCCccchhccccccccccccccccchHHHHHHHHcC
Confidence 348999999999 5899999999997754 445667774 875433334333 221 2 33333344333
Q ss_pred cCccCCceEEEcCChhhHHHH
Q 026770 202 PELQGMTLHFVEDRLATLKNV 222 (233)
Q Consensus 202 p~~~~~~~l~VGDs~~dv~aA 222 (233)
..-. ++|||...|+..+
T Consensus 192 y~Ii----~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 192 YRII----ANIGDQLSDFSGA 208 (229)
T ss_dssp EEEE----EEEESSGGGCHCT
T ss_pred CcEE----EEeCCCHHHhhcc
Confidence 3344 8999999999883
No 126
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.67 E-value=0.00051 Score=54.08 Aligned_cols=87 Identities=16% Similarity=0.258 Sum_probs=47.5
Q ss_pred CCCHHHHH---hcCCCeEEEEeCCcHHHHH---HHHHHh--cCCCCCCCeEEeCCCC-------------C---HHHHHH
Q 026770 141 YPGIPDAL---KFASSRIYIVTTKQSRFAD---ALLREL--AGVTIPPDRIYGLGTG-------------P---KVEVLK 196 (233)
Q Consensus 141 ~pgv~~~L---~~~g~~l~IvTn~~~~~~~---~~l~~~--~gl~~~f~~iv~~~~~-------------p---k~~~l~ 196 (233)
.|++.+++ +++|+++.++|+++..... ..+..+ .|..-....++++... | |.+.++
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 45666666 5789999999999987764 555551 0211112355554331 2 233444
Q ss_pred HhcC-CcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 197 QLQK-KPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 197 ~l~~-~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
.+.. -|+....=++.+||+.+|+++=++. |+
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~-gi 140 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVISYSAV-GI 140 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHHHHHc-CC
Confidence 4432 1211111113588889999987765 54
No 127
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.64 E-value=0.00014 Score=71.98 Aligned_cols=82 Identities=21% Similarity=0.309 Sum_probs=66.1
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC----------------------CCC--H
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----------------------TGP--K 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~----------------------~~p--k 191 (233)
+|.||+.+.+ +++|+++.++||.....+..+.+.+ |+...++.+++++ ..| |
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 7899999999 6899999999999999999999995 9987776543321 113 4
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..+++.++...+.+ .||||+.+|.-|.+++
T Consensus 607 ~~iv~~lq~~g~~v----~mvGDGvND~pAl~~A 636 (884)
T TIGR01522 607 MKIVKALQKRGDVV----AMTGDGVNDAPALKLA 636 (884)
T ss_pred HHHHHHHHHCCCEE----EEECCCcccHHHHHhC
Confidence 56777777666666 9999999999998876
No 128
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.61 E-value=0.0012 Score=56.25 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=52.7
Q ss_pred hhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHH---HHHHHHHhcCCCCCCCeEEeC-C-CC-C------HHHHHHHhc
Q 026770 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL-G-TG-P------KVEVLKQLQ 199 (233)
Q Consensus 135 ~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~f~~iv~~-~-~~-p------k~~~l~~l~ 199 (233)
....++.|++.++. +++|+++.++||+.... ....|.+ .|+..+ +.++-. . +. + |.+.-+++.
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li 218 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLI 218 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHH
Confidence 34678999999999 58999999999998543 3456666 488654 544433 2 21 1 222233332
Q ss_pred CC-cCccCCceEEEcCChhhHHHH
Q 026770 200 KK-PELQGMTLHFVEDRLATLKNV 222 (233)
Q Consensus 200 ~~-p~~~~~~~l~VGDs~~dv~aA 222 (233)
.+ ..-. ..|||..+|+...
T Consensus 219 ~eGYrIv----~~iGDq~sDl~G~ 238 (275)
T TIGR01680 219 QEGYNIV----GIIGDQWNDLKGE 238 (275)
T ss_pred HcCceEE----EEECCCHHhccCC
Confidence 22 3344 7999999999643
No 129
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.59 E-value=0.00018 Score=57.17 Aligned_cols=90 Identities=14% Similarity=0.145 Sum_probs=58.1
Q ss_pred hhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHH----HHHHhcCCCCCCCeEEeCCCC-C----HHHHHHHhcC
Q 026770 133 TWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADA----LLRELAGVTIPPDRIYGLGTG-P----KVEVLKQLQK 200 (233)
Q Consensus 133 ~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~----~l~~~~gl~~~f~~iv~~~~~-p----k~~~l~~l~~ 200 (233)
.|.+..-|-.-+.+++ +++|=.++.+|++....++. +.+.| .|...-..++.++-. | |...++.-+.
T Consensus 108 g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F-~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~ 186 (237)
T COG3700 108 GWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNF-HITNMNPVIFAGDKPKPGQYTKTQWIQDKNI 186 (237)
T ss_pred CCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhc-ccCCCcceeeccCCCCcccccccHHHHhcCc
Confidence 3333344555566777 47899999999987654432 33443 676555566666532 1 2334444443
Q ss_pred CcCccCCceEEEcCChhhHHHHHhCCCCcCCC
Q 026770 201 KPELQGMTLHFVEDRLATLKNVIKEPELDGWN 232 (233)
Q Consensus 201 ~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~~ 232 (233)
+ |+-|||.+|+.||+.. |.+||.
T Consensus 187 ~--------IhYGDSD~Di~AAkea-G~RgIR 209 (237)
T COG3700 187 R--------IHYGDSDNDITAAKEA-GARGIR 209 (237)
T ss_pred e--------EEecCCchhhhHHHhc-Ccccee
Confidence 3 8999999999999887 888874
No 130
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.51 E-value=0.00023 Score=69.20 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=61.6
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCC--HHHHHHHhcCCcCccCCceEEEc
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGP--KVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~p--k~~~l~~l~~~p~~~~~~~l~VG 213 (233)
+++||+.+.| +++|++++++|+.+...++.+.+.+ |+..++ +..| |+.++++++. +..+ +|||
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~~------~~~p~~K~~~v~~l~~-~~~v----~mvG 635 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFRA------GLLPEDKVKAVTELNQ-HAPL----AMVG 635 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCeec------CCCHHHHHHHHHHHhc-CCCE----EEEE
Confidence 7899999998 6889999999999999999999995 996332 2223 7888888873 3455 9999
Q ss_pred CChhhHHHHHhC
Q 026770 214 DRLATLKNVIKE 225 (233)
Q Consensus 214 Ds~~dv~aA~~~ 225 (233)
|+.+|..+.+++
T Consensus 636 DgiNDapAl~~A 647 (741)
T PRK11033 636 DGINDAPAMKAA 647 (741)
T ss_pred CCHHhHHHHHhC
Confidence 999999998765
No 131
>PTZ00445 p36-lilke protein; Provisional
Probab=97.50 E-value=0.0003 Score=57.70 Aligned_cols=87 Identities=20% Similarity=0.298 Sum_probs=63.4
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHH---------------HHHHHHHHhcCCCCCCCeEEeCCCC------------
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRIYGLGTG------------ 189 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~---------------~~~~~l~~~~gl~~~f~~iv~~~~~------------ 189 (233)
+-|....++ ++.|++++|||=++.. .++..|+. .+..--...+++.-..
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 456666666 5789999999976653 46777876 4665555566654221
Q ss_pred ---CHH--------HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCCC
Q 026770 190 ---PKV--------EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 232 (233)
Q Consensus 190 ---pk~--------~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~~ 232 (233)
|.| .++++.++.|++| +||+|+..|+++|++. |++++.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~----LFIDD~~~NVeaA~~l-Gi~ai~ 203 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEI----LFIDDDMNNCKNALKE-GYIALH 203 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHe----EeecCCHHHHHHHHHC-CCEEEE
Confidence 322 2567889999999 9999999999999996 887753
No 132
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.44 E-value=0.00045 Score=58.68 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=27.2
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEE
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 184 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv 184 (233)
+++|++++++|+++...+...++.+ ++....+.++
T Consensus 33 ~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~~~~~I 67 (270)
T PRK10513 33 RAKGVNVVLTTGRPYAGVHRYLKEL-HMEQPGDYCI 67 (270)
T ss_pred HHCCCEEEEecCCChHHHHHHHHHh-CCCCCCCeEE
Confidence 4779999999999999999899985 8864333333
No 133
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.41 E-value=0.0003 Score=59.99 Aligned_cols=17 Identities=47% Similarity=0.528 Sum_probs=16.0
Q ss_pred CCceeEeecCccccCCc
Q 026770 1 MADLYALDFDGVLCDSC 17 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~ 17 (233)
|.|+|+||+||||+++.
T Consensus 1 m~kli~~DlDGTLl~~~ 17 (272)
T PRK15126 1 MARLAAFDMDGTLLMPD 17 (272)
T ss_pred CccEEEEeCCCcCcCCC
Confidence 88999999999999877
No 134
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.38 E-value=0.0019 Score=53.84 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=57.2
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCcHHH----HHHHHHHhcCCCCCCC-eEEeCCCC-CHHHHHHHhcCCcCccC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF----ADALLRELAGVTIPPD-RIYGLGTG-PKVEVLKQLQKKPELQG 206 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~----~~~~l~~~~gl~~~f~-~iv~~~~~-pk~~~l~~l~~~p~~~~ 206 (233)
....+.||+.++| .++|..+.-+||+..+. ...-|.++ ||...-+ .++--.+. ||..-.+.+....+-+
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~-g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~iV- 196 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE-GLPQVLESHLLLKKDKKSKEVRRQAVEKDYKIV- 196 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc-CcccccccceEEeeCCCcHHHHHHHHhhcccee-
Confidence 4568999999999 58999999999998776 34566664 8865433 33333333 5543333333345556
Q ss_pred CceEEEcCChhhHHHHHh
Q 026770 207 MTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~ 224 (233)
++|||+..|......
T Consensus 197 ---m~vGDNl~DF~d~~~ 211 (274)
T COG2503 197 ---MLVGDNLDDFGDNAY 211 (274)
T ss_pred ---eEecCchhhhcchhh
Confidence 999999999876543
No 135
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=97.34 E-value=0.00016 Score=49.58 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=29.2
Q ss_pred HHHHHhcCCcCccCCceEEEcCC-hhhHHHHHhCCCCcCC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGW 231 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs-~~dv~aA~~~~~~~~~ 231 (233)
.++++++++|+++ +||||+ ..|+.+|++. |+++|
T Consensus 12 ~a~~~~~~~~~~~----~~VGD~~~~Di~~a~~~-G~~~i 46 (75)
T PF13242_consen 12 QALKRLGVDPSRC----VMVGDSLETDIEAAKAA-GIDTI 46 (75)
T ss_dssp HHHHHHTSGGGGE----EEEESSTTTHHHHHHHT-TSEEE
T ss_pred HHHHHcCCCHHHE----EEEcCCcHhHHHHHHHc-CCcEE
Confidence 4678888899999 999999 9999999977 77654
No 136
>PRK10976 putative hydrolase; Provisional
Probab=97.33 E-value=0.00039 Score=58.96 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=16.0
Q ss_pred CCceeEeecCccccCCc
Q 026770 1 MADLYALDFDGVLCDSC 17 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~ 17 (233)
|.|+|+||+||||+|+.
T Consensus 1 mikli~~DlDGTLl~~~ 17 (266)
T PRK10976 1 MYQVVASDLDGTLLSPD 17 (266)
T ss_pred CceEEEEeCCCCCcCCC
Confidence 78999999999999987
No 137
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.32 E-value=0.00066 Score=58.04 Aligned_cols=49 Identities=35% Similarity=0.513 Sum_probs=33.4
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHH---HHHHHHHhcCCCCCCCeEEeCCC
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLGT 188 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~f~~iv~~~~ 188 (233)
++||+.++| +++|.++.++||++... ....|+.+.++....+.|+++..
T Consensus 25 ~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~ 79 (269)
T COG0647 25 AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGD 79 (269)
T ss_pred cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHH
Confidence 467777777 68899999999987543 34555553255566677777643
No 138
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.27 E-value=0.0067 Score=56.37 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=47.2
Q ss_pred CCCCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC-----CC--------C-------HHHHHHH-h
Q 026770 140 FYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----TG--------P-------KVEVLKQ-L 198 (233)
Q Consensus 140 ~~pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~-----~~--------p-------k~~~l~~-l 198 (233)
+.|.+.+.++++|.. +|+|.+++..++...+.+.|++ .|+|.+ ++ + |...+++ .
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 667777777666755 9999999999999997622664 333332 11 2 3333432 3
Q ss_pred cCCcCccCCceEEEcCChhhHHHHH
Q 026770 199 QKKPELQGMTLHFVEDRLATLKNVI 223 (233)
Q Consensus 199 ~~~p~~~~~~~l~VGDs~~dv~aA~ 223 (233)
+.+ ... +..|||.+|...-.
T Consensus 186 g~~-~~~----~aYgDS~sD~plL~ 205 (497)
T PLN02177 186 GDA-LPD----LGLGDRETDHDFMS 205 (497)
T ss_pred CCC-Cce----EEEECCccHHHHHH
Confidence 322 223 79999999987644
No 139
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.11 E-value=0.0013 Score=55.73 Aligned_cols=17 Identities=53% Similarity=0.745 Sum_probs=15.7
Q ss_pred CCceeEeecCccccCCc
Q 026770 1 MADLYALDFDGVLCDSC 17 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~ 17 (233)
|.++|+||+||||+++.
T Consensus 2 ~~kli~~DlDGTLl~~~ 18 (264)
T COG0561 2 MIKLLAFDLDGTLLDSN 18 (264)
T ss_pred CeeEEEEcCCCCccCCC
Confidence 56999999999999988
No 140
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.05 E-value=0.00054 Score=53.89 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=53.6
Q ss_pred CCCCHHHHH--hcCCCeEEEEeCCcHHHHHHHHHHhcCCC-CCCCe--EEeCCCCCHHHHHHHhcCCcCccCCceEEEcC
Q 026770 140 FYPGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGVT-IPPDR--IYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 214 (233)
Q Consensus 140 ~~pgv~~~L--~~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~f~~--iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGD 214 (233)
+-.++...| .++..+++-+|.......+..-.-+ ... ..++. |+|.. .|.++++...++ ++++|
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l-~~q~ih~~~l~i~g~h--~KV~~vrth~id--------lf~ed 141 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAWL-FIQNIHYDHLEIVGLH--HKVEAVRTHNID--------LFFED 141 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHH-HHhccchhhhhhhccc--ccchhhHhhccC--------ccccc
Confidence 345566666 3556789999998877765543332 221 23444 34433 367888888776 99999
Q ss_pred ChhhHHHHHhCCCCc
Q 026770 215 RLATLKNVIKEPELD 229 (233)
Q Consensus 215 s~~dv~aA~~~~~~~ 229 (233)
+..+.-++.+|+|..
T Consensus 142 ~~~na~~iAk~~~~~ 156 (194)
T COG5663 142 SHDNAGQIAKNAGIP 156 (194)
T ss_pred cCchHHHHHHhcCCc
Confidence 999999999988875
No 141
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.02 E-value=0.0027 Score=58.14 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=55.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhc--------CCCCCCCeEEeCCCCCH----------------
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA--------GVTIPPDRIYGLGTGPK---------------- 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~--------gl~~~f~~iv~~~~~pk---------------- 191 (233)
..-|.+..+| ++.|.++.++||++..+++..++.+. .|.++||.||+....|.
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g 262 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG 262 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence 3456777777 68899999999999999999998864 46689999887643221
Q ss_pred ----------------------HHHHHHhcCCcCccCCceEEEcCChh-hHHHHHhCCC
Q 026770 192 ----------------------VEVLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPE 227 (233)
Q Consensus 192 ----------------------~~~l~~l~~~p~~~~~~~l~VGDs~~-dv~aA~~~~~ 227 (233)
....+.++...+++ +||||+.. |+..+++..|
T Consensus 263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~V----LY~GDhi~~Di~~~k~~~g 317 (448)
T PF05761_consen 263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEV----LYFGDHIYGDILKSKKRHG 317 (448)
T ss_dssp SEECS---SS--TC-EEEE--HHHHHHHCT--GGGE----EEEESSTTTTHHHHHHHH-
T ss_pred ccccccccccccCCCEeecCCHHHHHHHHccCCCeE----EEECCchhhhhhhhccccc
Confidence 12445555554444 99999987 7777776544
No 142
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.00 E-value=0.0022 Score=63.91 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=62.8
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCC--------CC------------------eEEeCCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP--------PD------------------RIYGLGTG 189 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--------f~------------------~iv~~~~~ 189 (233)
+|.|++.+.+ +++|+++.++|+.....+..+.+.+ |+... ++ .++.+...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 6899999999 6899999999999999999999995 98641 11 12333333
Q ss_pred C--HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 190 P--KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 190 p--k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
| |..+++.++...+.+ .|+||+.+|+.|.+++
T Consensus 616 P~~K~~iV~~lq~~g~~v----a~iGDG~ND~~alk~A 649 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIV----AMTGDGVNDAPALKKA 649 (917)
T ss_pred HHHHHHHHHHHHhcCCeE----EEecCCcchHHHHHhC
Confidence 3 466777777555566 9999999999988765
No 143
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.99 E-value=0.0015 Score=53.64 Aligned_cols=28 Identities=18% Similarity=0.065 Sum_probs=21.9
Q ss_pred HHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 194 VLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 194 ~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+++.++++++++ ++|||+.+|+.+.+.+
T Consensus 155 l~~~~~i~~~~~----i~iGDs~ND~~ml~~a 182 (215)
T TIGR01487 155 LKELLGIKPEEV----AAIGDSENDIDLFRVV 182 (215)
T ss_pred HHHHhCCCHHHE----EEECCCHHHHHHHHhC
Confidence 345556666666 9999999999998876
No 144
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.93 E-value=0.0015 Score=62.97 Aligned_cols=81 Identities=20% Similarity=0.314 Sum_probs=63.1
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDR 215 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs 215 (233)
++.|++.+.+ |++|+++.++|+-++..++.+-+.+ |+++++..+.= + -|.+.+++++.+...+ .||||.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v~AellP-e--dK~~~V~~l~~~g~~V----amVGDG 608 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEVRAELLP-E--DKAEIVRELQAEGRKV----AMVGDG 608 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhheccCCc-H--HHHHHHHHHHhcCCEE----EEEeCC
Confidence 6789999998 7899999999999999999999996 99654422110 1 2678999998655566 999999
Q ss_pred hhhHHH-HHhCCC
Q 026770 216 LATLKN-VIKEPE 227 (233)
Q Consensus 216 ~~dv~a-A~~~~~ 227 (233)
.||--| |....|
T Consensus 609 INDAPALA~AdVG 621 (713)
T COG2217 609 INDAPALAAADVG 621 (713)
T ss_pred chhHHHHhhcCee
Confidence 999887 444433
No 145
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.90 E-value=0.0021 Score=55.45 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=22.6
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~ 179 (233)
+++|++++++|++....+....+.+ ++..+
T Consensus 31 k~~GI~vVlaTGRt~~ev~~l~~~L-gl~~p 60 (302)
T PRK12702 31 ERRSIPLVLYSLRTRAQLEHLCRQL-RLEHP 60 (302)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHh-CCCCe
Confidence 4668888888888888887788775 77643
No 146
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.82 E-value=0.0039 Score=47.26 Aligned_cols=81 Identities=14% Similarity=0.273 Sum_probs=64.3
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHHHHHHhcCCcCccCCceEEE
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~~l~~l~~~p~~~~~~~l~V 212 (233)
.-.+|+.+.+.+ ++. +.++|+|+....++...++- .|+. .+.+....+. -|..+++.|+.+.+.+ +||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~~k~----vmV 99 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRYEKV----VMV 99 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCCcEE----EEe
Confidence 347899999988 456 99999999999999888887 4864 3445444333 6788999999877889 999
Q ss_pred cCChhhHHHHHhC
Q 026770 213 EDRLATLKNVIKE 225 (233)
Q Consensus 213 GDs~~dv~aA~~~ 225 (233)
||..+|+-+-+++
T Consensus 100 GnGaND~laLr~A 112 (152)
T COG4087 100 GNGANDILALREA 112 (152)
T ss_pred cCCcchHHHhhhc
Confidence 9999998886654
No 147
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.80 E-value=0.003 Score=52.61 Aligned_cols=29 Identities=28% Similarity=0.190 Sum_probs=21.8
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
+++|++++++|+++...+...++.+ |+..
T Consensus 28 ~~~G~~~vi~TgR~~~~~~~~~~~l-g~~~ 56 (225)
T TIGR02461 28 KDLGFPIVFVSSKTRAEQEYYREEL-GVEP 56 (225)
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHHc-CCCC
Confidence 4568888888888887777777774 7754
No 148
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.67 E-value=0.0055 Score=50.43 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=24.3
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
+++|++++++||++...++..++.+ ++.
T Consensus 29 ~~~gi~~~i~TgR~~~~~~~~~~~l-~~~ 56 (221)
T TIGR02463 29 QEAGIPVILCTSKTAAEVEYLQKAL-GLT 56 (221)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence 4678999999999999999999985 875
No 149
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.65 E-value=0.0058 Score=52.15 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=24.1
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
+++|++++++|+++...+...++.+ |+.
T Consensus 37 ~~~Gi~~viaTGR~~~~i~~~~~~l-~~~ 64 (271)
T PRK03669 37 REAQVPVILCSSKTAAEMLPLQQTL-GLQ 64 (271)
T ss_pred HHcCCeEEEEcCCCHHHHHHHHHHh-CCC
Confidence 4679999999999999998899985 885
No 150
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.46 E-value=0.0092 Score=49.09 Aligned_cols=69 Identities=14% Similarity=0.040 Sum_probs=46.3
Q ss_pred CCeEEE-EeCCcHHHHHHHHHHhcCCC----CCCCeEEeCCCC-CH--HHHHHHhcCCcCccCCceEEEcCChhhHHHHH
Q 026770 152 SSRIYI-VTTKQSRFADALLRELAGVT----IPPDRIYGLGTG-PK--VEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 223 (233)
Q Consensus 152 g~~l~I-vTn~~~~~~~~~l~~~~gl~----~~f~~iv~~~~~-pk--~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~ 223 (233)
++.+.+ .++.....+...++.. ++. .+|..|...... ++ ..+++.++++++++ ++|||+.+|+.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~v----i~~GD~~NDi~ml~ 212 (221)
T TIGR02463 138 SVPLLWRDSDSRMPRFTALLADL-GLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKT----LGLGDGPNDLPLLE 212 (221)
T ss_pred CccEEecCchhHHHHHHHHHHHc-CCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcE----EEECCCHHHHHHHH
Confidence 344444 4555556666777773 765 445455544433 22 35778888888888 99999999999988
Q ss_pred hC
Q 026770 224 KE 225 (233)
Q Consensus 224 ~~ 225 (233)
.+
T Consensus 213 ~a 214 (221)
T TIGR02463 213 VA 214 (221)
T ss_pred hC
Confidence 65
No 151
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.42 E-value=0.0056 Score=58.86 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=61.0
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCC--HHHHHHHhcCCcCccCCceEEEc
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGP--KVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~p--k~~~l~~l~~~p~~~~~~~l~VG 213 (233)
++.|++.+.+ ++.|+++.++|+-+...+..+.+.+ |+.++| + +..| |..+++.++.+.+.+ .|+|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GI~~v~----A-~~~PedK~~iV~~lQ~~G~~V----aMtG 510 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA-GVDRFV----A-ECKPEDKINVIREEQAKGHIV----AMTG 510 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCceEE----c-CCCHHHHHHHHHHHHhCCCEE----EEEC
Confidence 6889999998 6889999999999999999999995 997533 2 2223 677888887665556 8999
Q ss_pred CChhhHHHHHh
Q 026770 214 DRLATLKNVIK 224 (233)
Q Consensus 214 Ds~~dv~aA~~ 224 (233)
|..+|.-|-++
T Consensus 511 DGvNDAPALa~ 521 (673)
T PRK14010 511 DGTNDAPALAE 521 (673)
T ss_pred CChhhHHHHHh
Confidence 99999887444
No 152
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.40 E-value=0.011 Score=56.92 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=61.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCC--HHHHHHHhcCCcCccCCceEEEc
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGP--KVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~p--k~~~l~~l~~~p~~~~~~~l~VG 213 (233)
++.||+.+.+ ++.|+++.++|+.....++.+.+.+ |+.++| +. ..| |.+.++.++.+...+ .|+|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~v~----a~-~~PedK~~~v~~lq~~g~~V----amvG 515 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDDFI----AE-ATPEDKIALIRQEQAEGKLV----AMTG 515 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCEEE----cC-CCHHHHHHHHHHHHHcCCeE----EEEC
Confidence 6789999998 6889999999999999999999995 996533 32 223 577888876655556 9999
Q ss_pred CChhhHHHHHhC
Q 026770 214 DRLATLKNVIKE 225 (233)
Q Consensus 214 Ds~~dv~aA~~~ 225 (233)
|..+|.-+-+++
T Consensus 516 DG~NDapAL~~A 527 (675)
T TIGR01497 516 DGTNDAPALAQA 527 (675)
T ss_pred CCcchHHHHHhC
Confidence 999999886554
No 153
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.38 E-value=0.0081 Score=49.48 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=23.1
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
+++|++++++|+++...+...+..+ ++.
T Consensus 28 ~~~g~~~~i~TGR~~~~~~~~~~~~-~~~ 55 (254)
T PF08282_consen 28 QEKGIKLVIATGRSYSSIKRLLKEL-GID 55 (254)
T ss_dssp HHTTCEEEEECSSTHHHHHHHHHHT-THC
T ss_pred cccceEEEEEccCcccccccccccc-cch
Confidence 3578899999999998888888885 775
No 154
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.36 E-value=0.008 Score=50.63 Aligned_cols=14 Identities=36% Similarity=0.567 Sum_probs=12.5
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
+++||+||||++..
T Consensus 1 li~~DlDGTLl~~~ 14 (256)
T TIGR00099 1 LIFIDLDGTLLNDD 14 (256)
T ss_pred CEEEeCCCCCCCCC
Confidence 48999999999876
No 155
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.34 E-value=0.011 Score=49.89 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=22.9
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
+++|++++++|+++...+...++.+ |+..
T Consensus 29 ~~~g~~~~~~TgR~~~~~~~~~~~~-~~~~ 57 (256)
T TIGR01486 29 QELGIPVIPCTSKTAAEVEYLRKEL-GLED 57 (256)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHc-CCCC
Confidence 3568889999998888888888885 7753
No 156
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.32 E-value=0.014 Score=56.31 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=61.0
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHHHHHHhcCCcCccCCceEEEcC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~~l~~l~~~p~~~~~~~l~VGD 214 (233)
++.||+.+.+ ++.|+++.++|+-+...++.+.+.+ |+++ +++.-.. -|.+.++.++...+.+ .|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GId~----v~A~~~PedK~~iV~~lQ~~G~~V----aMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDD----FLAEATPEDKLALIRQEQAEGRLV----AMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcE----EEccCCHHHHHHHHHHHHHcCCeE----EEECC
Confidence 5689999998 6899999999999999999999995 9965 3332221 3677888887665556 99999
Q ss_pred ChhhHHHHHh
Q 026770 215 RLATLKNVIK 224 (233)
Q Consensus 215 s~~dv~aA~~ 224 (233)
..+|.-|-++
T Consensus 516 GvNDAPALa~ 525 (679)
T PRK01122 516 GTNDAPALAQ 525 (679)
T ss_pred CcchHHHHHh
Confidence 9999887443
No 157
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=96.23 E-value=0.089 Score=44.65 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=49.7
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHh--cCCCCCCCeE-------E------eC-C------CC-----
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTIPPDRI-------Y------GL-G------TG----- 189 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~--~gl~~~f~~i-------v------~~-~------~~----- 189 (233)
.-+++.+++ +.+|+++..+|..+.......++.+ .|++ |+.- + .. . .|
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 445666666 6889999999998877665444433 2553 2211 0 00 0 00
Q ss_pred --CHH----HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 190 --PKV----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 190 --pk~----~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+|. ..+.+++..|+.. |||+|+..++.+..+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~I----IfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKI----IFIDDNKENLKSVEKA 197 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeE----EEEeCCHHHHHHHHHH
Confidence 232 3566777777777 9999999988775443
No 158
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.21 E-value=0.019 Score=56.07 Aligned_cols=81 Identities=19% Similarity=0.245 Sum_probs=64.6
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC-CHHHHHHHhcCCcCccCCceEEEcC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~-pk~~~l~~l~~~p~~~~~~~l~VGD 214 (233)
++.|++...+ ++.|++++++|+-+...++.+.+.. | ++.|++.-.. .|.+.+++++.+.... .||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-G----i~~V~aev~P~~K~~~Ik~lq~~~~~V----aMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-G----IDNVYAEVLPEQKAEKIKEIQKNGGPV----AMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-C----cceEEeccCchhhHHHHHHHHhcCCcE----EEEeC
Confidence 5678887776 8999999999999999999999995 8 5666664332 4678899988776566 99999
Q ss_pred ChhhHHH-HHhCCCC
Q 026770 215 RLATLKN-VIKEPEL 228 (233)
Q Consensus 215 s~~dv~a-A~~~~~~ 228 (233)
..+|--| |..+.|+
T Consensus 794 GINDaPALA~AdVGI 808 (951)
T KOG0207|consen 794 GINDAPALAQADVGI 808 (951)
T ss_pred CCCccHHHHhhccce
Confidence 9999877 6666665
No 159
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.00 E-value=0.03 Score=47.97 Aligned_cols=38 Identities=18% Similarity=0.046 Sum_probs=34.4
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 187 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~ 187 (233)
++.|.-+++=|.++++-+...++.+ +|.++||.|+|..
T Consensus 155 k~~g~vLvLWSyG~~eHV~~sl~~~-~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 155 KEQGCVLVLWSYGNREHVRHSLKEL-KLEGYFDIIICGG 192 (297)
T ss_pred HHcCCEEEEecCCCHHHHHHHHHHh-CCccccEEEEeCC
Confidence 6778899999999999999999995 9999999999864
No 160
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.82 E-value=0.045 Score=43.58 Aligned_cols=80 Identities=24% Similarity=0.267 Sum_probs=50.6
Q ss_pred CCCCCHHHHH---hcCCC--eEEEEeCCc-------HHHHHHHHHHhcCCCCCCCeEEeCCCCCH--HHHHHHhcCC---
Q 026770 139 RFYPGIPDAL---KFASS--RIYIVTTKQ-------SRFADALLRELAGVTIPPDRIYGLGTGPK--VEVLKQLQKK--- 201 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~--~l~IvTn~~-------~~~~~~~l~~~~gl~~~f~~iv~~~~~pk--~~~l~~l~~~--- 201 (233)
.+.|.+.+.+ ++.+. ++.|+||+. ...++..-+.+ |+. ++.-..-.|. .++++.++..
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gIp----vl~h~~kKP~~~~~i~~~~~~~~~~ 133 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GIP----VLRHRAKKPGCFREILKYFKCQKVV 133 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CCc----EEEeCCCCCccHHHHHHHHhhccCC
Confidence 4556666666 44444 599999983 56666777774 752 2222222232 4566666544
Q ss_pred --cCccCCceEEEcCChh-hHHHHHhCCCC
Q 026770 202 --PELQGMTLHFVEDRLA-TLKNVIKEPEL 228 (233)
Q Consensus 202 --p~~~~~~~l~VGDs~~-dv~aA~~~~~~ 228 (233)
|++. ++|||..- |+-+|.+. |+
T Consensus 134 ~~p~ei----avIGDrl~TDVl~gN~~-G~ 158 (168)
T PF09419_consen 134 TSPSEI----AVIGDRLFTDVLMGNRM-GS 158 (168)
T ss_pred CCchhE----EEEcchHHHHHHHhhcc-Cc
Confidence 6666 99999986 88888877 44
No 161
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.79 E-value=0.028 Score=55.02 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=60.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC---Ce-----------------------EEeCCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DR-----------------------IYGLGTG 189 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f---~~-----------------------iv~~~~~ 189 (233)
+|.|++.+.+ +++|+++.++|+.+...++.+.+.+ |+.+.. +. +++.- .
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~-~ 519 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV-F 519 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec-C
Confidence 6889999998 6899999999999999999999995 996420 00 12211 1
Q ss_pred C--HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 190 P--KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 190 p--k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
| |..+++.++...+.+ .|+||+.+|.-|-+++
T Consensus 520 Pe~K~~iV~~lq~~G~~V----amvGDGvNDapAL~~A 553 (755)
T TIGR01647 520 PEHKYEIVEILQKRGHLV----GMTGDGVNDAPALKKA 553 (755)
T ss_pred HHHHHHHHHHHHhcCCEE----EEEcCCcccHHHHHhC
Confidence 3 456777776555555 9999999999885543
No 162
>PTZ00174 phosphomannomutase; Provisional
Probab=95.77 E-value=0.0077 Score=50.74 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=23.7
Q ss_pred CHHHHHHHhcCCcCccCCceEEEcC----ChhhHHHHHh
Q 026770 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIK 224 (233)
Q Consensus 190 pk~~~l~~l~~~p~~~~~~~l~VGD----s~~dv~aA~~ 224 (233)
.|..+++.+...++++ +.||| +.+|+++-+.
T Consensus 188 sKg~al~~L~~~~~ev----iafGD~~~~~~NDieMl~~ 222 (247)
T PTZ00174 188 DKTYCLRHLENDFKEI----HFFGDKTFEGGNDYEIYND 222 (247)
T ss_pred cHHHHHHHHHhhhhhE----EEEcccCCCCCCcHhhhhc
Confidence 4667777776555555 99999 8999999874
No 163
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.68 E-value=0.052 Score=45.16 Aligned_cols=14 Identities=29% Similarity=0.309 Sum_probs=12.2
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
+|++||||||+|+.
T Consensus 1 li~~DlDgTLl~~~ 14 (236)
T TIGR02471 1 LIITDLDNTLLGDD 14 (236)
T ss_pred CeEEeccccccCCH
Confidence 47899999999876
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.68 E-value=0.019 Score=41.69 Aligned_cols=49 Identities=27% Similarity=0.383 Sum_probs=33.6
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcH---HHHHHHHHHhcCCCCCCCeEEeCC
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLG 187 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~---~~~~~~l~~~~gl~~~f~~iv~~~ 187 (233)
..++||+.++| +++|.++.++||++. ......|+.+ |+.--.+.|+++.
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~-Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL-GIPVDEDEIITSG 67 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT-TTT--GGGEEEHH
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc-CcCCCcCEEEChH
Confidence 46899999999 688999999999873 3445667785 8874445555543
No 165
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.65 E-value=0.047 Score=54.79 Aligned_cols=81 Identities=19% Similarity=0.180 Sum_probs=60.5
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeC----------------------CCCC--H
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL----------------------GTGP--K 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~----------------------~~~p--k 191 (233)
+|.|++.+.+ +++|+++.++|+-....+..+.+.+ |+...-..++++ ...| |
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~-GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC-GILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 6889999998 6889999999999999999999995 996321122221 1123 4
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
..+++.++...+.+ .|+||+.+|.-|-++
T Consensus 658 ~~iV~~lq~~g~vV----am~GDGvNDapALk~ 686 (941)
T TIGR01517 658 QLLVLMLKDMGEVV----AVTGDGTNDAPALKL 686 (941)
T ss_pred HHHHHHHHHCCCEE----EEECCCCchHHHHHh
Confidence 56777776555556 999999999988554
No 166
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.58 E-value=0.044 Score=54.45 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=59.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeC-C---------------------CCC--H
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-G---------------------TGP--K 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~-~---------------------~~p--k 191 (233)
+|.|++.+.+ +++|+++.++|+-....+..+.+.+ |+.. +.++++ + ..| |
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 6789999998 6899999999999999999999995 9952 112221 1 013 4
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..+++.++...+.+ .|+||+.+|.-|-+++
T Consensus 592 ~~iV~~lq~~G~vV----am~GDGvNDapALk~A 621 (867)
T TIGR01524 592 SRIIGLLKKAGHTV----GFLGDGINDAPALRKA 621 (867)
T ss_pred HHHHHHHHhCCCEE----EEECCCcccHHHHHhC
Confidence 56777776554555 9999999999886553
No 167
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.52 E-value=0.041 Score=54.93 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=59.8
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC----------------------CC--H
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----------------------GP--K 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~----------------------~p--k 191 (233)
+|.|++.+.+ +++|+++.++|+-+...+..+.+.+ |+.. +.++++.+ .| |
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 6789999998 6899999999999999999999995 9952 22222211 13 4
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..+++.++...+.+ .|+||+.+|.-|-+++
T Consensus 627 ~~IV~~Lq~~G~vV----am~GDGvNDaPALk~A 656 (902)
T PRK10517 627 ERIVTLLKREGHVV----GFMGDGINDAPALRAA 656 (902)
T ss_pred HHHHHHHHHCCCEE----EEECCCcchHHHHHhC
Confidence 56777776555555 9999999999885543
No 168
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.46 E-value=0.048 Score=49.91 Aligned_cols=69 Identities=23% Similarity=0.269 Sum_probs=51.4
Q ss_pred HhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCC--------CHH----HHHHHhcCCcCccCCceEEEcCC
Q 026770 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------PKV----EVLKQLQKKPELQGMTLHFVEDR 215 (233)
Q Consensus 148 L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~--------pk~----~~l~~l~~~p~~~~~~~l~VGDs 215 (233)
|+++|+-++|+|-+....++..+.+. -+.|+.-++. ||. .+++++++-.+.- +||+|+
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~kh------p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSm----vFiDD~ 336 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRKH------PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSM----VFIDDN 336 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhhC------CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccce----EEecCC
Confidence 36889999999988888888877764 2344443322 774 4677777766666 999999
Q ss_pred hhhHHHHHhCC
Q 026770 216 LATLKNVIKEP 226 (233)
Q Consensus 216 ~~dv~aA~~~~ 226 (233)
+...+--+++.
T Consensus 337 p~ErE~vk~~~ 347 (574)
T COG3882 337 PAERELVKREL 347 (574)
T ss_pred HHHHHHHHhcC
Confidence 99998888775
No 169
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=95.45 E-value=0.076 Score=44.97 Aligned_cols=65 Identities=29% Similarity=0.360 Sum_probs=44.3
Q ss_pred cCCCeEEEEeCCcHHHHHH---HHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 150 FASSRIYIVTTKQSRFADA---LLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~---~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..-++++|||..+...-+. .|+.+ |+ .+|..+.-.-.||..+++.++-. ||++|....++.|...
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~W-gv--~vDEafFLgG~~K~~vL~~~~ph--------IFFDDQ~~H~~~a~~~ 251 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSW-GV--RVDEAFFLGGLPKGPVLKAFRPH--------IFFDDQDGHLESASKV 251 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHc-CC--cHhHHHHhCCCchhHHHHhhCCC--------EeecCchhhhhHhhcC
Confidence 3458999999876544444 45553 55 35543322212788899888765 9999999999998854
No 170
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.38 E-value=0.043 Score=54.79 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=59.3
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCC----------------------CC--H
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----------------------GP--K 191 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~----------------------~p--k 191 (233)
+|.|++.+.+ +++|+++.++|+-+...+..+.+.+ |+.. +.++++.+ .| |
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 6789999998 6899999999999999999999995 9952 12222111 12 4
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHh
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~ 224 (233)
..+++.++...+.+ .|+||+.+|.-|-++
T Consensus 627 ~~iV~~Lq~~G~vV----amtGDGvNDaPALk~ 655 (903)
T PRK15122 627 SRVLKALQANGHTV----GFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHHHhCCCEE----EEECCCchhHHHHHh
Confidence 56777776555555 999999999988554
No 171
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.12 E-value=0.041 Score=52.75 Aligned_cols=29 Identities=21% Similarity=0.142 Sum_probs=21.5
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
+++|++++++|+++...+...++.+ ++..
T Consensus 446 ~ekGI~~VIATGRs~~~i~~l~~~L-gl~~ 474 (694)
T PRK14502 446 KDKELPLVFCSAKTMGEQDLYRNEL-GIKD 474 (694)
T ss_pred HHcCCeEEEEeCCCHHHHHHHHHHc-CCCC
Confidence 4668888888888888777777774 7643
No 172
>PLN02423 phosphomannomutase
Probab=95.06 E-value=0.018 Score=48.56 Aligned_cols=30 Identities=20% Similarity=0.096 Sum_probs=25.2
Q ss_pred CHHHHHHHhcCCcCccCCceEEEcC----ChhhHHHHHh
Q 026770 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIK 224 (233)
Q Consensus 190 pk~~~l~~l~~~p~~~~~~~l~VGD----s~~dv~aA~~ 224 (233)
.|..+++.+. +++++ +.+|| +.+|+++-+.
T Consensus 189 nKg~al~~L~-~~~e~----~aFGD~~~~~~ND~eMl~~ 222 (245)
T PLN02423 189 DKTYCLQFLE-DFDEI----HFFGDKTYEGGNDHEIFES 222 (245)
T ss_pred CHHHHHHHhc-CcCeE----EEEeccCCCCCCcHHHHhC
Confidence 4677888888 77777 99999 7999999875
No 173
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.05 E-value=0.081 Score=53.68 Aligned_cols=82 Identities=16% Similarity=0.216 Sum_probs=60.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC----------CeEEeCC------------------
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP----------DRIYGLG------------------ 187 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f----------~~iv~~~------------------ 187 (233)
+|.|++.+.+ +++|+++.++|+.....+..+.+.+ |+.... ..++++.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~-Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV-GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 6789999999 6899999999999999999999995 995321 1233321
Q ss_pred ----CCC--HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 188 ----TGP--KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 188 ----~~p--k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..| |..+++.++...+.+ .|+||+.+|.-|-+++
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~V----am~GDGvNDapaLk~A 764 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFC----AMTGDGVNDSPSLKMA 764 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCee----EEeCCCcchHHHHHhC
Confidence 113 345677766555556 9999999999985543
No 174
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.95 E-value=0.014 Score=44.31 Aligned_cols=15 Identities=13% Similarity=0.220 Sum_probs=13.3
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
|+|+||+||||++..
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999999764
No 175
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.89 E-value=0.065 Score=43.85 Aligned_cols=26 Identities=35% Similarity=0.426 Sum_probs=18.8
Q ss_pred CceeEeecCccccCCcchhHHHHHHH
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKA 27 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~ 27 (233)
.|+|+||+||||+|..+.....+..+
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~ 26 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEA 26 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHH
Confidence 37899999999999875544444433
No 176
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=94.80 E-value=0.065 Score=45.03 Aligned_cols=20 Identities=5% Similarity=-0.157 Sum_probs=16.4
Q ss_pred CceEEEcCChhhHHHHHhCC
Q 026770 207 MTLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 207 ~~~l~VGDs~~dv~aA~~~~ 226 (233)
+++++|||+.+|+.+.+..+
T Consensus 184 ~~~i~~GD~~ND~~ml~~~~ 203 (249)
T TIGR01485 184 SQTLVCGDSGNDIELFEIGS 203 (249)
T ss_pred cCEEEEECChhHHHHHHccC
Confidence 45699999999999988753
No 177
>PLN02887 hydrolase family protein
Probab=94.75 E-value=0.024 Score=53.76 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=25.5
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..+++.+|++++++ +.|||+.+|+++-+..
T Consensus 513 k~L~e~lGI~~eev----iAFGDs~NDIeMLe~A 542 (580)
T PLN02887 513 KMLLNHLGVSPDEI----MAIGDGENDIEMLQLA 542 (580)
T ss_pred HHHHHHcCCCHHHE----EEEecchhhHHHHHHC
Confidence 34677888888888 9999999999998765
No 178
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=94.58 E-value=0.062 Score=45.90 Aligned_cols=18 Identities=28% Similarity=0.182 Sum_probs=14.2
Q ss_pred ceEEEcCChhhHHHHHhC
Q 026770 208 TLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~~~ 225 (233)
++++|||+.+|..+-+..
T Consensus 192 ~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 192 TPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred eEEEEcCCccHHHHHHHH
Confidence 459999999998885543
No 179
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.52 E-value=0.13 Score=52.06 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=34.3
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
+|.|++.+.+ +++|+++.++|+.....+..+.+.+ |+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence 6788999998 6899999999999999999999995 984
No 180
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=94.47 E-value=0.2 Score=46.35 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=26.8
Q ss_pred CCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 142 PGIPDALKFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 142 pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
|.+.+..++.| +.+|+|..++..++..++.+.|.+
T Consensus 99 ~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 99 MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 33555556677 999999999999999999853543
No 181
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=94.15 E-value=0.2 Score=41.65 Aligned_cols=87 Identities=17% Similarity=0.180 Sum_probs=63.9
Q ss_pred CCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcC-------CCCCCCeEEeCCCC--CHHHHHHHhcCCcCcc
Q 026770 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGTG--PKVEVLKQLQKKPELQ 205 (233)
Q Consensus 138 ~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~g-------l~~~f~~iv~~~~~--pk~~~l~~l~~~p~~~ 205 (233)
.+.|+++...+ +..|++++|.|+++...++.+..+ .+ +..|||.-+|.... .-..+.+.++.+|.+.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~ei 200 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREI 200 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhhe
Confidence 37899999999 578999999999998766665544 22 33456665554322 2356778888888776
Q ss_pred CCceEEEcCChhhHHHHHhCCCCcC
Q 026770 206 GMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 206 ~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
+|.-|-+.-..||+.. |++.
T Consensus 201 ----LfLTd~~~Ea~aa~~a-Gl~a 220 (254)
T KOG2630|consen 201 ----LFLTDVPREAAAARKA-GLQA 220 (254)
T ss_pred ----EEeccChHHHHHHHhc-ccce
Confidence 9999999999888877 5653
No 182
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.93 E-value=0.044 Score=42.69 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=52.9
Q ss_pred CCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCC-CCCCCeEEeCCCC---C--HHHHHHHhcCCcCccCCce
Q 026770 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGTG---P--KVEVLKQLQKKPELQGMTL 209 (233)
Q Consensus 138 ~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl-~~~f~~iv~~~~~---p--k~~~l~~l~~~p~~~~~~~ 209 (233)
..+.||+.++|+ .+.+.++|.|++.+.+++.+++.+ .- ..+|+.+++.+.. . ...-+..++.+++.+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~l-dp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~v---- 109 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDAL-DPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNV---- 109 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHH-TTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGE----
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhh-hhhccccccccccccccccccccccchHHHhhccccE----
Confidence 357899999993 456999999999999999999996 65 5679988877643 1 122344444445566
Q ss_pred EEEcCChhhHH
Q 026770 210 HFVEDRLATLK 220 (233)
Q Consensus 210 l~VGDs~~dv~ 220 (233)
|+|+|++.-..
T Consensus 110 vivDD~~~~~~ 120 (159)
T PF03031_consen 110 VIVDDSPRKWA 120 (159)
T ss_dssp EEEES-GGGGT
T ss_pred EEEeCCHHHee
Confidence 99999997543
No 183
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=93.85 E-value=0.14 Score=43.11 Aligned_cols=114 Identities=15% Similarity=0.230 Sum_probs=67.5
Q ss_pred HhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHH
Q 026770 96 NWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (233)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~ 172 (233)
+|=.....++.+.+++.+.+.+... .....+.+|+.+++ +++++|+.|.|.+-.+.++.+|++
T Consensus 61 EWw~kah~llv~~~l~k~~i~~~V~--------------~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q 126 (246)
T PF05822_consen 61 EWWTKAHELLVEQGLTKSEIEEAVK--------------ESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ 126 (246)
T ss_dssp HHHHHHHHHHHHHT-BGGGHHHHHH--------------CS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHH--------------hcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH
Confidence 3335566777888888877655443 23467889999998 689999999999999999999999
Q ss_pred hcCCCCCCCeEEeC-----CCC-------C------HHH-HHH---HhcCCcCccCCceEEEcCChhhHHHHHhCC
Q 026770 173 LAGVTIPPDRIYGL-----GTG-------P------KVE-VLK---QLQKKPELQGMTLHFVEDRLATLKNVIKEP 226 (233)
Q Consensus 173 ~~gl~~~f~~iv~~-----~~~-------p------k~~-~l~---~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~ 226 (233)
. |....=-.|+|. +++ | |.+ ++. ... --..+.+++..|||..|+.+|...+
T Consensus 127 ~-~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~--~~~~R~NvlLlGDslgD~~Ma~G~~ 199 (246)
T PF05822_consen 127 A-GVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFK--QLKKRTNVLLLGDSLGDLHMADGVP 199 (246)
T ss_dssp T-T--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHH--CTTT--EEEEEESSSGGGGTTTT-S
T ss_pred c-CCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHH--HhccCCcEEEecCccCChHhhcCCC
Confidence 4 653211134443 112 2 222 331 111 1123456799999999999986554
No 184
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.33 E-value=0.29 Score=49.07 Aligned_cols=82 Identities=15% Similarity=0.228 Sum_probs=61.1
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC--eEEeCCC-C--C--------------------
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGT-G--P-------------------- 190 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~--~iv~~~~-~--p-------------------- 190 (233)
+|.|++.+.+ +++|+++.++|+-....+..+-+.+ |+..--. .++.+.. . .
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 7889999998 7899999999999999999999995 9865543 3544432 1 1
Q ss_pred -HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 191 -KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 191 -k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
|..+++.++...+-+ .|+||+.+|.-|-|++
T Consensus 626 qK~~IV~~lq~~g~vV----amtGDGvNDapALk~A 657 (917)
T COG0474 626 QKARIVEALQKSGHVV----AMTGDGVNDAPALKAA 657 (917)
T ss_pred HHHHHHHHHHhCCCEE----EEeCCCchhHHHHHhc
Confidence 123555555444445 9999999999887764
No 185
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.25 E-value=0.039 Score=43.04 Aligned_cols=16 Identities=50% Similarity=0.655 Sum_probs=13.8
Q ss_pred CceeEeecCccccCCc
Q 026770 2 ADLYALDFDGVLCDSC 17 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~ 17 (233)
.|+|+||+||||+|..
T Consensus 1 ~~~~~~D~Dgtl~~~~ 16 (154)
T TIGR01670 1 IRLLILDVDGVLTDGK 16 (154)
T ss_pred CeEEEEeCceeEEcCe
Confidence 3789999999999954
No 186
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.21 E-value=0.35 Score=44.97 Aligned_cols=73 Identities=22% Similarity=0.348 Sum_probs=56.6
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCC--HHHHHHHhcCCcCccCCceEEEc
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGP--KVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~p--k~~~l~~l~~~p~~~~~~~l~VG 213 (233)
++.|++.+.+ ++.|+++.++|+.....+...-+.+ |+ ++ +..| |.+.++.+......+ .|||
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-gi-------~~-~~~p~~K~~~v~~l~~~g~~v----~~vG 413 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-GI-------FA-RVTPEEKAALVEALQKKGRVV----AMTG 413 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-Cc-------ee-ccCHHHHHHHHHHHHHCCCEE----EEEC
Confidence 6889999988 6789999999999999999999885 86 12 2223 567777775544455 9999
Q ss_pred CChhhHHHHHh
Q 026770 214 DRLATLKNVIK 224 (233)
Q Consensus 214 Ds~~dv~aA~~ 224 (233)
|..+|.-+-+.
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988543
No 187
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=93.12 E-value=0.044 Score=44.02 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=13.8
Q ss_pred CceeEeecCccccCC
Q 026770 2 ADLYALDFDGVLCDS 16 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds 16 (233)
.++|+||+||||+|.
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 589999999999987
No 188
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=92.84 E-value=0.58 Score=47.66 Aligned_cols=38 Identities=26% Similarity=0.325 Sum_probs=34.5
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
++.|++.+.+ +++|+++.++|+.+...+..+.+.+ |+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~-gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC-GIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence 6889999998 6899999999999999999999995 994
No 189
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.74 E-value=0.054 Score=44.46 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=31.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCCC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 232 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~~ 232 (233)
.+++.+|++|+++ +||||..+|-.......||+||-
T Consensus 189 ~al~~~gv~p~~a----VMIGDD~~dDvgGAq~~GMrgil 224 (262)
T KOG3040|consen 189 SALQALGVDPEEA----VMIGDDLNDDVGGAQACGMRGIL 224 (262)
T ss_pred HHHHhcCCChHHh----eEEccccccchhhHhhhcceeEE
Confidence 4788899999999 99999999888888888999973
No 190
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=92.69 E-value=0.53 Score=39.47 Aligned_cols=12 Identities=42% Similarity=0.625 Sum_probs=10.8
Q ss_pred eeEeecCccccC
Q 026770 4 LYALDFDGVLCD 15 (233)
Q Consensus 4 ~viFD~DGTL~D 15 (233)
+|+.||||||+|
T Consensus 3 li~tDlDGTLl~ 14 (249)
T TIGR01485 3 LLVSDLDNTLVD 14 (249)
T ss_pred EEEEcCCCcCcC
Confidence 578899999997
No 191
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.88 E-value=0.33 Score=40.96 Aligned_cols=48 Identities=8% Similarity=0.152 Sum_probs=38.6
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeC---CcHHHHHHHHHHhcCCCCCCCeEEeCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTT---KQSRFADALLRELAGVTIPPDRIYGLG 187 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn---~~~~~~~~~l~~~~gl~~~f~~iv~~~ 187 (233)
.++|++.++| +++|++++++|| ++...+...++.+ |+....+.|+++.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~-g~~~~~~~iit~~ 70 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF-DIPATLETVFTAS 70 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCChhhEeeHH
Confidence 3678999988 688999999998 4567777888885 9987777787764
No 192
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.74 E-value=0.14 Score=41.45 Aligned_cols=29 Identities=17% Similarity=0.019 Sum_probs=23.2
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.++++++.+++++ ++|||+.+|+.+.+..
T Consensus 170 ~~~~~~~~~~~~~----~~~GD~~nD~~~~~~~ 198 (204)
T TIGR01484 170 ALLKELNGKRDEI----LAFGDSGNDEEMFEVA 198 (204)
T ss_pred HHHHHhCCCHHHE----EEEcCCHHHHHHHHHc
Confidence 3556667677777 9999999999998865
No 193
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=91.60 E-value=0.07 Score=41.52 Aligned_cols=15 Identities=40% Similarity=0.623 Sum_probs=12.9
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
|+++||+||||+++.
T Consensus 1 k~LVlDLD~TLv~~~ 15 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSS 15 (159)
T ss_dssp EEEEEE-CTTTEEEE
T ss_pred CEEEEeCCCcEEEEe
Confidence 589999999999988
No 194
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.39 E-value=0.64 Score=45.50 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=62.1
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC----eEEeCCCC---C------------------
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD----RIYGLGTG---P------------------ 190 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~----~iv~~~~~---p------------------ 190 (233)
+|.|++.+.+ ++.|+++.++|+-....+..+.++. |+...-+ ..+++... |
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 7889999888 6899999999999999999999995 9866554 23333211 2
Q ss_pred ---HHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 191 ---KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 191 ---k~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
|.++++.|+...+-+ .|-||..+|--|-|++
T Consensus 663 P~HK~kIVeaLq~~geiv----AMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVV----AMTGDGVNDAPALKKA 696 (972)
T ss_pred chhHHHHHHHHHhcCCEE----EecCCCccchhhhhhc
Confidence 134667776666677 8999999998876654
No 195
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=91.04 E-value=0.4 Score=42.41 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=34.5
Q ss_pred CCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHh--cCCCCCCCeEEeCC
Q 026770 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTIPPDRIYGLG 187 (233)
Q Consensus 142 pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~--~gl~~~f~~iv~~~ 187 (233)
|....+| +++|.++.++||++..++..-++.+ ..|.++||+|+.-.
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA 293 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQA 293 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEec
Confidence 4444555 6899999999999999997766543 24678899887653
No 196
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=90.92 E-value=1 Score=46.01 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=33.5
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
+|-||+.+.+ +++|+++.++|+-....+..+.... |+..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~-~ii~ 672 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC-RLLS 672 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CCCC
Confidence 6889999999 6899999999999988888888874 7743
No 197
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.90 E-value=0.43 Score=47.45 Aligned_cols=23 Identities=9% Similarity=-0.031 Sum_probs=17.5
Q ss_pred cCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 199 QKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 199 ~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+..++.+ ++|||..+|..+=+..
T Consensus 778 g~~~d~v----l~~GDD~nDedMF~~~ 800 (854)
T PLN02205 778 GMLPDFV----LCIGDDRSDEDMFEVI 800 (854)
T ss_pred CCCcccE----EEEcCCccHHHHHHHh
Confidence 4455556 9999999999886544
No 198
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=90.77 E-value=0.38 Score=44.66 Aligned_cols=81 Identities=19% Similarity=0.185 Sum_probs=60.4
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCCh
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL 216 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs~ 216 (233)
+-||++|-+ ++.|++...||+.++-.+..+... .|++++.... ..+ .|.+.+++.+.+..-. .|.||..
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiAea-tPE--dK~~~I~~eQ~~grlV----AMtGDGT 519 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIAEA-TPE--DKLALIRQEQAEGRLV----AMTGDGT 519 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhhcC-ChH--HHHHHHHHHHhcCcEE----EEcCCCC
Confidence 468988877 789999999999999988888888 6997654211 011 2567888877766666 8999999
Q ss_pred hhHHH-HHhCCCC
Q 026770 217 ATLKN-VIKEPEL 228 (233)
Q Consensus 217 ~dv~a-A~~~~~~ 228 (233)
+|--| |+.+.|+
T Consensus 520 NDAPALAqAdVg~ 532 (681)
T COG2216 520 NDAPALAQADVGV 532 (681)
T ss_pred Ccchhhhhcchhh
Confidence 99766 5555443
No 199
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.38 E-value=0.28 Score=41.55 Aligned_cols=47 Identities=26% Similarity=0.323 Sum_probs=35.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHH---HHHHHHHHhcCCCCCCCeEEeC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGL 186 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~---~~~~~l~~~~gl~~~f~~iv~~ 186 (233)
.++||+.++| +++|++++++||++.. .....++.+ |+.--.+.|+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~-g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL-GFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc-CCCCCHHHeEcH
Confidence 3789999999 6789999999996655 356677775 886444556655
No 200
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.64 E-value=0.16 Score=36.75 Aligned_cols=13 Identities=38% Similarity=0.810 Sum_probs=11.8
Q ss_pred eEeecCccccCCc
Q 026770 5 YALDFDGVLCDSC 17 (233)
Q Consensus 5 viFD~DGTL~Ds~ 17 (233)
++||+||||++..
T Consensus 1 ~l~D~dGvl~~g~ 13 (101)
T PF13344_consen 1 FLFDLDGVLYNGN 13 (101)
T ss_dssp EEEESTTTSEETT
T ss_pred CEEeCccEeEeCC
Confidence 6899999999876
No 201
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=88.86 E-value=1.2 Score=36.84 Aligned_cols=28 Identities=7% Similarity=-0.217 Sum_probs=23.0
Q ss_pred HHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 194 VLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 194 ~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
++++++.+++++ ++|||+.+|+.+.+..
T Consensus 167 l~~~~g~~~~~~----i~~GD~~nD~~ml~~~ 194 (236)
T TIGR02471 167 LSYRWGLPLEQI----LVAGDSGNDEEMLRGL 194 (236)
T ss_pred HHHHhCCCHHHE----EEEcCCccHHHHHcCC
Confidence 556677777788 9999999999987754
No 202
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=88.62 E-value=1.2 Score=37.68 Aligned_cols=73 Identities=11% Similarity=-0.027 Sum_probs=46.7
Q ss_pred CCeEEEEeCCcHHHHHHHHHHhcCCCCCCC--eEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 152 SSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 152 g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~--~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+.--++||++.--..-.+.--+ ||+.+|. .|+++-...|..+++++..+........++|||+..--+||+.-
T Consensus 175 ~~vNvLVTs~qLVPaLaKcLLy-~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l 249 (274)
T TIGR01658 175 NCINVLVTSGQLIPSLAKCLLF-RLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAM 249 (274)
T ss_pred ceeEEEEEcCccHHHHHHHHHh-ccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhc
Confidence 3445677777654444444444 8988885 58887655677666665433222223448999999999888864
No 203
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=87.75 E-value=1.9 Score=36.12 Aligned_cols=29 Identities=10% Similarity=0.004 Sum_probs=24.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.++++++++ ++|||+.+|+.+.+..
T Consensus 195 ~~~~~~~~~~~~~----~~~GD~~nD~~m~~~~ 223 (256)
T TIGR00099 195 SLAEALGISLEDV----IAFGDGMNDIEMLEAA 223 (256)
T ss_pred HHHHHcCCCHHHE----EEeCCcHHhHHHHHhC
Confidence 4667778888888 9999999999998875
No 204
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=87.02 E-value=0.3 Score=40.94 Aligned_cols=29 Identities=7% Similarity=-0.021 Sum_probs=22.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.++++++..+..+ +||||+.+|+.+.+..
T Consensus 174 ~~~~~~~~~~~~~----i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 174 RLLWHQPGSGISP----VYLGDDITDEDAFRVV 202 (244)
T ss_pred HHHHhcccCCCce----EEEcCCCcHHHHHHHH
Confidence 3556666666666 9999999999998866
No 205
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=87.01 E-value=0.54 Score=40.30 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=25.4
Q ss_pred HHHHHhcCCcCccCCceEEEcCChh-hHHHHHhCCCCcCC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGW 231 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~-dv~aA~~~~~~~~~ 231 (233)
.+++.++..++++ +||||+.. |+.+|++ .||+.+
T Consensus 198 ~al~~~~~~~~~~----~mVGD~~~TDI~~a~~-~G~~t~ 232 (269)
T COG0647 198 AALEKLGLDRSEV----LMVGDRLDTDILGAKA-AGLDTL 232 (269)
T ss_pred HHHHHhCCCcccE----EEEcCCchhhHHHHHH-cCCCEE
Confidence 3677788877777 99999987 5555554 598864
No 206
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=85.55 E-value=0.77 Score=37.00 Aligned_cols=14 Identities=43% Similarity=0.655 Sum_probs=12.2
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
+|+||+||||+++.
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 48999999999865
No 207
>PRK10444 UMP phosphatase; Provisional
Probab=85.07 E-value=1.5 Score=37.05 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=34.4
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHH---HHHHHHHhcCCCCCCCeEEeC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL 186 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~f~~iv~~ 186 (233)
.++||+.++| +++|.++.++||++... ....|+.+ |+.---+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~-G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATA-GVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCCHhhEecH
Confidence 4789999998 58899999999988643 34556664 775445566655
No 208
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=84.92 E-value=1.4 Score=37.47 Aligned_cols=39 Identities=28% Similarity=0.288 Sum_probs=31.8
Q ss_pred CCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC
Q 026770 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP 180 (233)
Q Consensus 141 ~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f 180 (233)
.|.+.++| +++|++++++||++...+...++.+ |+..++
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l-~l~~~~ 64 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL-GLEDPF 64 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCCCE
Confidence 34555666 6789999999999999999999995 987655
No 209
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=84.86 E-value=17 Score=30.59 Aligned_cols=38 Identities=13% Similarity=0.305 Sum_probs=31.0
Q ss_pred CCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026770 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 176 (233)
Q Consensus 138 ~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl 176 (233)
..+.||+.+.++ +.-.+-+|+|.+..++++.....+ |+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~i-g~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMI-GV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhc-CC
Confidence 578999999995 344677899999999998888874 77
No 210
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=84.34 E-value=1.9 Score=42.71 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=12.0
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
.+++||+||||+.-.
T Consensus 508 rll~LDyDGTL~~~~ 522 (797)
T PLN03063 508 RLLILGFYGTLTEPR 522 (797)
T ss_pred eEEEEecCccccCCC
Confidence 578899999999543
No 211
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=82.96 E-value=0.71 Score=35.60 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.6
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
..+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 579999999999985
No 212
>PLN03190 aminophospholipid translocase; Provisional
Probab=82.29 E-value=3.3 Score=42.84 Aligned_cols=34 Identities=18% Similarity=0.419 Sum_probs=28.2
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHH
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~ 172 (233)
+|-+|+.+.+ +++|+++.++|+.....+..+-..
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 7889999998 688999999999887776666554
No 213
>PRK10976 putative hydrolase; Provisional
Probab=82.18 E-value=0.96 Score=38.09 Aligned_cols=29 Identities=14% Similarity=-0.023 Sum_probs=24.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.+|++++++ +.|||+.+|+.+-+..
T Consensus 197 ~l~~~lgi~~~~v----iafGD~~NDi~Ml~~a 225 (266)
T PRK10976 197 AVAKKLGYSLKDC----IAFGDGMNDAEMLSMA 225 (266)
T ss_pred HHHHHcCCCHHHe----EEEcCCcccHHHHHHc
Confidence 4667788988888 9999999999998765
No 214
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.13 E-value=2.4 Score=42.61 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=23.8
Q ss_pred CCCCHHHHH----hcCCCeEEEEeCCcHHHHHHHHHH
Q 026770 140 FYPGIPDAL----KFASSRIYIVTTKQSRFADALLRE 172 (233)
Q Consensus 140 ~~pgv~~~L----~~~g~~l~IvTn~~~~~~~~~l~~ 172 (233)
|.|++.++| +..+..++|+|+.+...++..+..
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 445555555 345678999999998888887765
No 215
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=81.73 E-value=0.77 Score=37.44 Aligned_cols=36 Identities=22% Similarity=0.380 Sum_probs=29.5
Q ss_pred CCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 141 YPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 141 ~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
.|++.++|+ .+.+.++|-|.+...+++.++..+ ++.
T Consensus 47 RP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l-~~~ 84 (195)
T TIGR02245 47 RPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL-GVL 84 (195)
T ss_pred CCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh-ccc
Confidence 477888882 457999999999999999999985 764
No 216
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=81.61 E-value=1.1 Score=37.75 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=24.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.++++++++ +.|||+.+|+.+-+..
T Consensus 203 ~l~~~~gi~~~~v----~afGD~~NDi~Ml~~a 231 (270)
T PRK10513 203 SLAEHLGIKPEEV----MAIGDQENDIAMIEYA 231 (270)
T ss_pred HHHHHhCCCHHHE----EEECCchhhHHHHHhC
Confidence 4667788888888 9999999999998765
No 217
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.22 E-value=8.1 Score=32.88 Aligned_cols=86 Identities=13% Similarity=0.159 Sum_probs=53.1
Q ss_pred CCHHHH---HhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCC-----CC----CHH----------HHHHH--
Q 026770 142 PGIPDA---LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----TG----PKV----------EVLKQ-- 197 (233)
Q Consensus 142 pgv~~~---L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~-----~~----pk~----------~~l~~-- 197 (233)
.|+.++ |+++++|+.|.|.+--..++.++..-.++ ..+..++|.- ++ -+. ..++.
T Consensus 141 eg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~-~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s 219 (298)
T KOG3128|consen 141 EGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVL-HPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNES 219 (298)
T ss_pred HHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhcc-CccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhh
Confidence 444444 47889999999999988888877763233 3344444431 11 011 12221
Q ss_pred --hcCCcCccCCceEEEcCChhhHHHHHhCCCCcC
Q 026770 198 --LQKKPELQGMTLHFVEDRLATLKNVIKEPELDG 230 (233)
Q Consensus 198 --l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~ 230 (233)
+.. -..+.+|++-|||..|+.+|-..+++..
T Consensus 220 ~yf~~--~~~~~nVillGdsigdl~ma~gv~~~~~ 252 (298)
T KOG3128|consen 220 EYFHQ--LAGRVNVILLGDSIGDLHMADGVPRVGH 252 (298)
T ss_pred HHHhh--ccCCceEEEeccccccchhhcCCccccc
Confidence 211 1233466999999999999988877654
No 218
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=80.17 E-value=0.9 Score=38.87 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=23.5
Q ss_pred CHHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 190 pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
.|..+++.+.........-+++.||...|-.+=+..-+++++
T Consensus 182 ~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~ 223 (266)
T COG1877 182 SKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSI 223 (266)
T ss_pred chHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCc
Confidence 345566544332211112349999999998775555444444
No 219
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=79.22 E-value=2.5 Score=34.44 Aligned_cols=29 Identities=17% Similarity=0.047 Sum_probs=24.5
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.++.+++++ +.|||+.+|+.+-+..
T Consensus 193 ~l~~~~~i~~~~~----~~~GD~~ND~~Ml~~~ 221 (254)
T PF08282_consen 193 YLLEYLGISPEDI----IAFGDSENDIEMLELA 221 (254)
T ss_dssp HHHHHHTTSGGGE----EEEESSGGGHHHHHHS
T ss_pred HHhhhccccccee----EEeecccccHhHHhhc
Confidence 4667788888888 9999999999987765
No 220
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=78.54 E-value=2.2 Score=35.85 Aligned_cols=29 Identities=7% Similarity=-0.160 Sum_probs=23.7
Q ss_pred HHHHHhcCC--cCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKK--PELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~--p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.++++ ++++ ++|||+.+|+.+.+..
T Consensus 183 ~l~~~~~i~~~~~~~----~a~GD~~ND~~Ml~~a 213 (256)
T TIGR01486 183 ALKQFYNQPGGAIKV----VGLGDSPNDLPLLEVV 213 (256)
T ss_pred HHHHHHhhcCCCceE----EEEcCCHhhHHHHHHC
Confidence 466777777 6777 9999999999998865
No 221
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=78.48 E-value=1.7 Score=36.80 Aligned_cols=29 Identities=7% Similarity=-0.142 Sum_probs=24.8
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++.+|++++++ +.|||+.+|+.+-+..
T Consensus 195 ~l~~~~gi~~~~v----~afGD~~NDi~Ml~~a 223 (272)
T PRK15126 195 VLSQHLGLSLADC----MAFGDAMNDREMLGSV 223 (272)
T ss_pred HHHHHhCCCHHHe----EEecCCHHHHHHHHHc
Confidence 4667779988888 9999999999997765
No 222
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=77.68 E-value=2.2 Score=35.65 Aligned_cols=14 Identities=29% Similarity=0.700 Sum_probs=12.3
Q ss_pred ceeEeecCccccCC
Q 026770 3 DLYALDFDGVLCDS 16 (233)
Q Consensus 3 ~~viFD~DGTL~Ds 16 (233)
.+++||+||||+..
T Consensus 4 ~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 4 RAFFFDYDGTLSEI 17 (244)
T ss_pred EEEEEecCccccCC
Confidence 57899999999974
No 223
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=77.49 E-value=12 Score=32.64 Aligned_cols=41 Identities=27% Similarity=0.445 Sum_probs=30.8
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHH---HHHHHhcCCCC
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFAD---ALLRELAGVTI 178 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~---~~l~~~~gl~~ 178 (233)
...+.||+.+.| ++.|.++.++||++...-+ .+++++ |+..
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~l-G~~~ 82 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKL-GFNS 82 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHh-Cccc
Confidence 457899999998 6889999999998755444 345554 7653
No 224
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=77.00 E-value=1.4 Score=34.59 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.8
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
+.+++|+|+||+.|.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999999987
No 225
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=75.69 E-value=1.4 Score=43.10 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=21.7
Q ss_pred HHHHHHHh--cCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 191 KVEVLKQL--QKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 191 k~~~l~~l--~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
|..+++.+ +.+++.+ +++||+.+|..+-+..
T Consensus 658 KG~al~~ll~~~~~d~v----l~~GD~~nDe~Mf~~~ 690 (726)
T PRK14501 658 KGRAVRRLLEAGPYDFV----LAIGDDTTDEDMFRAL 690 (726)
T ss_pred HHHHHHHHHhcCCCCEE----EEECCCCChHHHHHhc
Confidence 44444443 3455566 9999999999998764
No 226
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=75.34 E-value=2.9 Score=35.44 Aligned_cols=30 Identities=7% Similarity=-0.177 Sum_probs=24.8
Q ss_pred HHHHHHhcC---CcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~---~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..+++.+++ +++++ +.|||+.+|+.+-+..
T Consensus 193 ~~l~~~lgi~~~~~~~v----iafGDs~NDi~Ml~~a 225 (271)
T PRK03669 193 NWLIATYQQLSGTRPTT----LGLGDGPNDAPLLDVM 225 (271)
T ss_pred HHHHHHHHhhcCCCceE----EEEcCCHHHHHHHHhC
Confidence 346777888 77888 9999999999997765
No 227
>PLN03017 trehalose-phosphatase
Probab=75.20 E-value=1.5 Score=39.34 Aligned_cols=16 Identities=6% Similarity=0.000 Sum_probs=12.4
Q ss_pred eEEEcCChhhHHHHHh
Q 026770 209 LHFVEDRLATLKNVIK 224 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~~ 224 (233)
++||||..+|-.+=+.
T Consensus 305 pvyiGDD~TDEDaF~~ 320 (366)
T PLN03017 305 PVYIGDDRTDEDAFKM 320 (366)
T ss_pred EEEeCCCCccHHHHHH
Confidence 3999999998777443
No 228
>PLN02580 trehalose-phosphatase
Probab=75.19 E-value=1.5 Score=39.57 Aligned_cols=15 Identities=7% Similarity=0.040 Sum_probs=13.3
Q ss_pred EEEcCChhhHHHHHh
Q 026770 210 HFVEDRLATLKNVIK 224 (233)
Q Consensus 210 l~VGDs~~dv~aA~~ 224 (233)
+||||..+|..+=+.
T Consensus 324 i~iGDD~TDedmF~~ 338 (384)
T PLN02580 324 IYIGDDRTDEDAFKV 338 (384)
T ss_pred EEECCCchHHHHHHh
Confidence 899999999998764
No 229
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=75.08 E-value=6.7 Score=37.67 Aligned_cols=81 Identities=15% Similarity=0.081 Sum_probs=53.3
Q ss_pred cCCCCCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCC-CCCC-CeEEeCCCCCHHHHHHHhcCCcCccCCceEEE
Q 026770 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPP-DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (233)
Q Consensus 137 ~~~~~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl-~~~f-~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~V 212 (233)
.+++.|++.++|+ .+=+.++|+|=+.+.++..+++-+ .= ..|| +.|+|.+..|+........ +..|.+.+++|
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~li-DP~~~lF~dRIisrde~~~~kt~dL~~--~~p~g~smvvI 275 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLI-DPEGKYFGDRIISRDESPFFKTLDLVL--LFPCGDSMVVI 275 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHh-CCCCccccceEEEecCCCccccccccc--CCCCCCccEEE
Confidence 4578999999993 455999999999999998887763 32 2466 5799998765433333222 23344444555
Q ss_pred cCChhhHH
Q 026770 213 EDRLATLK 220 (233)
Q Consensus 213 GDs~~dv~ 220 (233)
.|-..||-
T Consensus 276 IDDr~dVW 283 (635)
T KOG0323|consen 276 IDDRSDVW 283 (635)
T ss_pred EeCccccc
Confidence 55555543
No 230
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=75.06 E-value=12 Score=28.42 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=50.8
Q ss_pred hcCCCCCCHHHHH---hcCCCeEEEEeCCc-HHHHHHHHHHhcCCCCCCCeEEeCCC--------CCHHHHHHHhcCCcC
Q 026770 136 GANRFYPGIPDAL---KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPE 203 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g~~l~IvTn~~-~~~~~~~l~~~~gl~~~f~~iv~~~~--------~pk~~~l~~l~~~p~ 203 (233)
.....|+++...| +++|+.++++|++. .+.+...|+.+ .+..-+..-.+.+. +.|...+..+-.+..
T Consensus 41 ~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f-kvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~ 119 (144)
T KOG4549|consen 41 EEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF-KVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSN 119 (144)
T ss_pred ceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh-ccCcccccchhhhcCceeeecCcccchhHHHHhhccC
Confidence 3456789998888 79999999999965 55667788885 66543322222111 134334444433333
Q ss_pred ccCCceEEEcCChhhHH
Q 026770 204 LQGMTLHFVEDRLATLK 220 (233)
Q Consensus 204 ~~~~~~l~VGDs~~dv~ 220 (233)
....++.++.|-..+-+
T Consensus 120 ~~~k~~~~fdDesrnke 136 (144)
T KOG4549|consen 120 SIEKNKQVFDDESRNKE 136 (144)
T ss_pred cchhceeeecccccCCc
Confidence 33344478888766543
No 231
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=74.03 E-value=6.7 Score=32.63 Aligned_cols=47 Identities=26% Similarity=0.400 Sum_probs=33.3
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCc---HHHHHHHHHH-hcCCCCCCCeEEeC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRE-LAGVTIPPDRIYGL 186 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~---~~~~~~~l~~-~~gl~~~f~~iv~~ 186 (233)
.++|++.+.| +++|+++.++||+. .......|.. + |+.-..+.++++
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~-g~~~~~~~iits 67 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL-GVDVSPDQIITS 67 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc-CCCCCHHHeeeH
Confidence 4689999999 57899999999766 3333344555 4 776556666665
No 232
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=73.49 E-value=1.7 Score=38.97 Aligned_cols=15 Identities=33% Similarity=0.696 Sum_probs=13.9
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
|.+.||+||||||+.
T Consensus 76 K~i~FD~dgtlI~t~ 90 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTK 90 (422)
T ss_pred ceEEEecCCceeecC
Confidence 678999999999987
No 233
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=73.42 E-value=5 Score=33.72 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=22.6
Q ss_pred HHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCCcCC
Q 026770 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 193 ~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
.++++++++++++ +++|||.+|+.+- .++.++|
T Consensus 172 ~L~~~~~~~~~~v----l~aGDSgND~~mL--~~~~~~v 204 (247)
T PF05116_consen 172 YLMERWGIPPEQV----LVAGDSGNDLEML--EGGDHGV 204 (247)
T ss_dssp HHHHHHT--GGGE----EEEESSGGGHHHH--CCSSEEE
T ss_pred HHHHHhCCCHHHE----EEEeCCCCcHHHH--cCcCCEE
Confidence 3566677777777 9999999999876 3344443
No 234
>PLN02151 trehalose-phosphatase
Probab=73.13 E-value=1.8 Score=38.67 Aligned_cols=15 Identities=7% Similarity=0.027 Sum_probs=12.2
Q ss_pred eEEEcCChhhHHHHH
Q 026770 209 LHFVEDRLATLKNVI 223 (233)
Q Consensus 209 ~l~VGDs~~dv~aA~ 223 (233)
++||||-.+|-.+=+
T Consensus 291 pvyiGDD~TDEDaF~ 305 (354)
T PLN02151 291 PIYIGDDRTDEDAFK 305 (354)
T ss_pred EEEEcCCCcHHHHHH
Confidence 399999999987744
No 235
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=72.53 E-value=1.9 Score=33.86 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=17.6
Q ss_pred CCCHHHHH---hcCCCeEEEEeCCcHHHH
Q 026770 141 YPGIPDAL---KFASSRIYIVTTKQSRFA 166 (233)
Q Consensus 141 ~pgv~~~L---~~~g~~l~IvTn~~~~~~ 166 (233)
.||+.++. +++||++.-+|+++-...
T Consensus 29 h~g~~~l~~~i~~~GY~ilYlTaRp~~qa 57 (157)
T PF08235_consen 29 HPGAAELYRKIADNGYKILYLTARPIGQA 57 (157)
T ss_pred hhcHHHHHHHHHHCCeEEEEECcCcHHHH
Confidence 46666666 577888888888774433
No 236
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=71.58 E-value=2.2 Score=35.54 Aligned_cols=15 Identities=40% Similarity=0.448 Sum_probs=13.6
Q ss_pred CCceeEeecCccccC
Q 026770 1 MADLYALDFDGVLCD 15 (233)
Q Consensus 1 m~~~viFD~DGTL~D 15 (233)
|..+|+-|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 568899999999999
No 237
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=70.20 E-value=22 Score=32.28 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=31.2
Q ss_pred HhcCCCeEEEEeCCcHHHHHHHHHHhc--CCCCCCCeEEeC
Q 026770 148 LKFASSRIYIVTTKQSRFADALLRELA--GVTIPPDRIYGL 186 (233)
Q Consensus 148 L~~~g~~l~IvTn~~~~~~~~~l~~~~--gl~~~f~~iv~~ 186 (233)
+++.|.++.++||+...+....+.... ++..||+.++..
T Consensus 210 ~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~ 250 (424)
T KOG2469|consen 210 LRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETR 250 (424)
T ss_pred HHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEe
Confidence 378999999999999988887776643 477899987654
No 238
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=70.16 E-value=3.6 Score=34.59 Aligned_cols=30 Identities=17% Similarity=-0.007 Sum_probs=24.3
Q ss_pred HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 192 ~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
..++++++++++++ +.|||+.+|+.+-+..
T Consensus 195 ~~l~~~lgi~~~~v----~afGD~~ND~~Ml~~a 224 (264)
T COG0561 195 QRLAKLLGIKLEEV----IAFGDSTNDIEMLEVA 224 (264)
T ss_pred HHHHHHhCCCHHHe----EEeCCccccHHHHHhc
Confidence 34677788888888 9999999999987643
No 239
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=69.93 E-value=2.4 Score=33.74 Aligned_cols=14 Identities=21% Similarity=0.216 Sum_probs=12.2
Q ss_pred CceeEeecCccccC
Q 026770 2 ADLYALDFDGVLCD 15 (233)
Q Consensus 2 ~~~viFD~DGTL~D 15 (233)
.++|+||+|.||+-
T Consensus 41 ik~li~DkDNTL~~ 54 (168)
T PF09419_consen 41 IKALIFDKDNTLTP 54 (168)
T ss_pred ceEEEEcCCCCCCC
Confidence 37999999999983
No 240
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=69.67 E-value=17 Score=31.58 Aligned_cols=44 Identities=27% Similarity=0.512 Sum_probs=32.0
Q ss_pred hcCCCCCCHHHHH---hcCC-CeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeC
Q 026770 136 GANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (233)
Q Consensus 136 ~~~~~~pgv~~~L---~~~g-~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~ 186 (233)
.+..+||...+++ |+.| ++++|+||+.. ..+++.+ . .+|.++-+
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L-~---~~dql~~s 136 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEEL-K---LPDQLYVS 136 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHh-c---cCCEEEEE
Confidence 4457899999998 6778 79999999998 4455553 3 46655533
No 241
>PRK06769 hypothetical protein; Validated
Probab=69.13 E-value=2.8 Score=33.14 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=11.7
Q ss_pred CceeEeecCcccc
Q 026770 2 ADLYALDFDGVLC 14 (233)
Q Consensus 2 ~~~viFD~DGTL~ 14 (233)
.++++||.||||.
T Consensus 4 ~~~~~~d~d~~~~ 16 (173)
T PRK06769 4 IQAIFIDRDGTIG 16 (173)
T ss_pred CcEEEEeCCCccc
Confidence 3899999999995
No 242
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=68.52 E-value=8.3 Score=31.43 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=30.9
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCC
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~ 179 (233)
+-|...+.| +++|++++++|+++...+...++.+ ++..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~ 62 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI-GTSGP 62 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCCc
Confidence 345566666 5789999999999999998888885 88654
No 243
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=68.39 E-value=2.4 Score=35.22 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=21.3
Q ss_pred CHHHHHHHhcCCcCcc---CCceEEEcCChhhHHHHHhCCC
Q 026770 190 PKVEVLKQLQKKPELQ---GMTLHFVEDRLATLKNVIKEPE 227 (233)
Q Consensus 190 pk~~~l~~l~~~p~~~---~~~~l~VGDs~~dv~aA~~~~~ 227 (233)
.|-.+++.+....... ..-++|+||..+|-.+=+...+
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~ 205 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRE 205 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTT
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHh
Confidence 3566666655433211 2234999999999887555444
No 244
>PLN02382 probable sucrose-phosphatase
Probab=67.64 E-value=2.8 Score=38.19 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=22.8
Q ss_pred HHHHHh---cCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 193 EVLKQL---QKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 193 ~~l~~l---~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.+++++ +++++++ +.+||+.+|+++-+..
T Consensus 182 ~L~~~~~~~gi~~~~~----iafGDs~NDleMl~~a 213 (413)
T PLN02382 182 YLLKKLKAEGKAPVNT----LVCGDSGNDAELFSVP 213 (413)
T ss_pred HHHHHhhhcCCChhcE----EEEeCCHHHHHHHhcC
Confidence 355566 7777777 9999999999987654
No 245
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=65.90 E-value=7.9 Score=32.00 Aligned_cols=28 Identities=7% Similarity=-0.161 Sum_probs=20.2
Q ss_pred HHHHhcC--CcCccCCceEEEcCChhhHHHHHhC
Q 026770 194 VLKQLQK--KPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 194 ~l~~l~~--~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
.++.++. .+.++ ++|||+.+|+.+.+..
T Consensus 189 l~~~~~~~~~~~~~----i~~GD~~nD~~ml~~a 218 (225)
T TIGR02461 189 LLDLYKLRPGAIES----VGLGDSENDFPMFEVV 218 (225)
T ss_pred HHHHhccccCcccE----EEEcCCHHHHHHHHhC
Confidence 3344443 44466 9999999999998765
No 246
>PLN02887 hydrolase family protein
Probab=65.43 E-value=4.6 Score=38.52 Aligned_cols=29 Identities=31% Similarity=0.261 Sum_probs=21.5
Q ss_pred CCceeEeecCccccCCcchhHHHHHHHHh
Q 026770 1 MADLYALDFDGVLCDSCGESSLSAVKAAK 29 (233)
Q Consensus 1 m~~~viFD~DGTL~Ds~~~~~~~a~~~~~ 29 (233)
|.|+|+||+||||+|+.+++...+..+..
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~ 335 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALK 335 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHH
Confidence 56999999999999987655555544433
No 247
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=65.06 E-value=6 Score=34.37 Aligned_cols=31 Identities=19% Similarity=0.247 Sum_probs=23.1
Q ss_pred HHHHhcCCcCccCCceEEEcCChh-hHHHHHhCCCCc
Q 026770 194 VLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELD 229 (233)
Q Consensus 194 ~l~~l~~~p~~~~~~~l~VGDs~~-dv~aA~~~~~~~ 229 (233)
++++.+++|+.+ +||||+.. |+.-+++ .|++
T Consensus 233 l~~~~~i~psRt----~mvGDRL~TDIlFG~~-~G~~ 264 (306)
T KOG2882|consen 233 LLEKFNIDPSRT----CMVGDRLDTDILFGKN-CGFK 264 (306)
T ss_pred HHHHcCCCcceE----EEEcccchhhhhHhhc-cCcc
Confidence 456677888888 99999987 6665554 4765
No 248
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=64.73 E-value=3.8 Score=32.06 Aligned_cols=15 Identities=27% Similarity=0.288 Sum_probs=13.7
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
..+++|+|.||+.|.
T Consensus 7 l~LVLDLDeTLihs~ 21 (156)
T TIGR02250 7 LHLVLDLDQTLIHTT 21 (156)
T ss_pred eEEEEeCCCCccccc
Confidence 578999999999998
No 249
>KOG3217 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=63.60 E-value=14 Score=28.74 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=46.8
Q ss_pred hhcCCCCCCHHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcC
Q 026770 135 IGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 214 (233)
Q Consensus 135 ~~~~~~~pgv~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGD 214 (233)
...-.|-|-+...|++.|+++ +...+.. .-+ .+ ..||.|++-|+....++.+..+.+|..+..+|++.|+
T Consensus 51 h~G~~PD~R~~s~lK~hGI~~---~H~aRqi---t~~---DF-~~FDYI~~MDesN~~dL~~~a~~~~~~~kakV~Llgs 120 (159)
T KOG3217|consen 51 HTGRSPDPRTLSILKKHGIKI---DHLARQI---TTS---DF-REFDYILAMDESNLRDLLRKASNQPKGSKAKVLLLGS 120 (159)
T ss_pred ccCCCCChHHHHHHHHcCCcc---hhhcccc---cHh---Hh-hhcceeEEecHHHHHHHHHHhccCCCCcceEEEEeec
Confidence 345578888889999999883 2222211 112 23 4699999988654455666667788887778888875
No 250
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=63.07 E-value=13 Score=31.02 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=30.8
Q ss_pred CCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 140 ~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
+.|...+.| +++|++++++|+++...+...++.+ ++..
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 61 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL-ALDT 61 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCCC
Confidence 445566666 5789999999999999998999985 8764
No 251
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=62.16 E-value=4.1 Score=37.24 Aligned_cols=16 Identities=25% Similarity=0.389 Sum_probs=13.8
Q ss_pred CceeEeecCccccCCc
Q 026770 2 ADLYALDFDGVLCDSC 17 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~ 17 (233)
.+.|++|+||||.-|-
T Consensus 375 ~kiVVsDiDGTITkSD 390 (580)
T COG5083 375 KKIVVSDIDGTITKSD 390 (580)
T ss_pred CcEEEEecCCcEEehh
Confidence 3789999999999765
No 252
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=61.22 E-value=4.8 Score=31.69 Aligned_cols=15 Identities=27% Similarity=0.091 Sum_probs=13.1
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
++|++|+||||.+..
T Consensus 26 ~~vv~D~Dgtl~~~~ 40 (170)
T TIGR01668 26 KGVVLDKDNTLVYPD 40 (170)
T ss_pred CEEEEecCCccccCC
Confidence 789999999999654
No 253
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=60.85 E-value=22 Score=32.01 Aligned_cols=74 Identities=16% Similarity=0.027 Sum_probs=45.7
Q ss_pred cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC--eEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCChhhHHHHHhC
Q 026770 150 FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (233)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~--~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~ 225 (233)
+.+.--++||+..--....++--+ ||...|. -|+++-...|..+++++..+... +-..+.|||....-.+||+-
T Consensus 368 r~ncvnVlvTttqLipalaKvLL~-gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~l 443 (468)
T KOG3107|consen 368 RKNCVNVLVTTTQLIPALAKVLLY-GLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKAL 443 (468)
T ss_pred ccceeEEEEeccchhHHHHHHHHH-hcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhh
Confidence 345556788887755444444443 8877764 58887655565555544433221 12337999999988888864
No 254
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=60.12 E-value=14 Score=29.97 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=27.7
Q ss_pred CCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 142 pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
|...+.| +++|++++++|+++...+...++.+ |+..
T Consensus 18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l-~~~~ 56 (225)
T TIGR01482 18 ESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI-GTPD 56 (225)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCC
Confidence 3344444 5789999999999999998888885 7543
No 255
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=58.30 E-value=5.3 Score=31.76 Aligned_cols=12 Identities=33% Similarity=0.390 Sum_probs=11.5
Q ss_pred ceeEeecCcccc
Q 026770 3 DLYALDFDGVLC 14 (233)
Q Consensus 3 ~~viFD~DGTL~ 14 (233)
++|++|+|.||+
T Consensus 29 kgvi~DlDNTLv 40 (175)
T COG2179 29 KGVILDLDNTLV 40 (175)
T ss_pred cEEEEeccCcee
Confidence 789999999999
No 256
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=56.53 E-value=38 Score=26.31 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=44.8
Q ss_pred hcCCCCCCHHHHHh--cCCCeEEEEeCC--cHHHHH----HHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCC
Q 026770 136 GANRFYPGIPDALK--FASSRIYIVTTK--QSRFAD----ALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGM 207 (233)
Q Consensus 136 ~~~~~~pgv~~~L~--~~g~~l~IvTn~--~~~~~~----~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~ 207 (233)
....+.|++.++++ ...+.++|+|.. .+.+.+ -+.+.| .+.++=..|+|+.-. + -...
T Consensus 65 RnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~F-PFi~~qn~vfCgnKn----------i-vkaD-- 130 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKF-PFISYQNIVFCGNKN----------I-VKAD-- 130 (180)
T ss_pred hhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHC-CCCChhhEEEecCCC----------e-EEee--
Confidence 35678999999994 456899999976 333333 344553 555566677787632 0 1123
Q ss_pred ceEEEcCChhhHHHHH
Q 026770 208 TLHFVEDRLATLKNVI 223 (233)
Q Consensus 208 ~~l~VGDs~~dv~aA~ 223 (233)
++|+|.+.+++.=+
T Consensus 131 --ilIDDnp~nLE~F~ 144 (180)
T COG4502 131 --ILIDDNPLNLENFK 144 (180)
T ss_pred --EEecCCchhhhhcc
Confidence 67777777666543
No 257
>PLN02382 probable sucrose-phosphatase
Probab=52.71 E-value=15 Score=33.57 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=22.8
Q ss_pred CeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCChhhHHH
Q 026770 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (233)
Q Consensus 181 ~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs~~dv~a 221 (233)
+.++.+|..-+.+.++..+. .. +.+|.....+..
T Consensus 196 ~~iafGDs~NDleMl~~ag~---~g----vam~NA~~elk~ 229 (413)
T PLN02382 196 NTLVCGDSGNDAELFSVPDV---YG----VMVSNAQEELLQ 229 (413)
T ss_pred cEEEEeCCHHHHHHHhcCCC---CE----EEEcCCcHHHHH
Confidence 34445554456777776552 23 889999999986
No 258
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=50.49 E-value=9 Score=30.87 Aligned_cols=15 Identities=27% Similarity=0.195 Sum_probs=13.6
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
++|++|-||||...-
T Consensus 6 k~lflDRDGtin~d~ 20 (181)
T COG0241 6 KALFLDRDGTINIDK 20 (181)
T ss_pred cEEEEcCCCceecCC
Confidence 699999999999766
No 259
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=49.89 E-value=8.8 Score=31.54 Aligned_cols=15 Identities=33% Similarity=0.476 Sum_probs=12.8
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
.+++||.||||.-..
T Consensus 12 ~l~lfdvdgtLt~~r 26 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPR 26 (252)
T ss_pred eEEEEecCCcccccc
Confidence 478999999999665
No 260
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=48.44 E-value=15 Score=31.16 Aligned_cols=45 Identities=7% Similarity=-0.055 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCceEEEcCC
Q 026770 165 FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDR 215 (233)
Q Consensus 165 ~~~~~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~l~VGDs 215 (233)
.++.+++.+ |+.. -..++.+|+..+.++++.+....... +.||.+
T Consensus 178 al~~ll~~~-~~~~-~~v~~~GD~~nD~~mf~~~~~~~g~~----vavg~a 222 (266)
T PRK10187 178 AIAAFMQEA-PFAG-RTPVFVGDDLTDEAGFAVVNRLGGIS----VKVGTG 222 (266)
T ss_pred HHHHHHHhc-CCCC-CeEEEEcCCccHHHHHHHHHhcCCeE----EEECCC
Confidence 356677774 7653 23444555446778887772111233 566654
No 261
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=48.04 E-value=39 Score=25.44 Aligned_cols=44 Identities=23% Similarity=0.200 Sum_probs=32.0
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHH---------------HHHHHHHHhcCCCCCCCeEEe
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRIYG 185 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~---------------~~~~~l~~~~gl~~~f~~iv~ 185 (233)
.+.+++.+.| +++|+.+.++|+++.. .+..+|.+. ++. +|.++-
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~-~ip--Yd~l~~ 85 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQH-NVP--YDEIYV 85 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHc-CCC--CceEEe
Confidence 4777888888 4789999999998765 345677774 773 455543
No 262
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=47.95 E-value=9.8 Score=25.96 Aligned_cols=14 Identities=29% Similarity=0.427 Sum_probs=12.6
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|.++-|||.+|++
T Consensus 40 ~l~L~eDGT~VddE 53 (74)
T smart00266 40 TLVLEEDGTIVDDE 53 (74)
T ss_pred EEEEecCCcEEccH
Confidence 57899999999998
No 263
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=47.89 E-value=9.8 Score=26.39 Aligned_cols=14 Identities=36% Similarity=0.373 Sum_probs=12.8
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|+.+-|||.+||+
T Consensus 41 ~lvLeeDGT~Vd~E 54 (81)
T cd06537 41 TLVLEEDGTAVDSE 54 (81)
T ss_pred EEEEecCCCEEccH
Confidence 57899999999999
No 264
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=47.57 E-value=81 Score=31.69 Aligned_cols=41 Identities=32% Similarity=0.520 Sum_probs=35.7
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCCCC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP 180 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f 180 (233)
+..||+++.+ +++|+.+-.+|+.+-..++.+... +||...=
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~ 690 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPG 690 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCC
Confidence 5689999988 689999999999999999999999 5986543
No 265
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=47.30 E-value=47 Score=29.18 Aligned_cols=28 Identities=18% Similarity=0.389 Sum_probs=22.3
Q ss_pred cCCCCCCHHHHH---hcCCCeEEEEeCCcHH
Q 026770 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSR 164 (233)
Q Consensus 137 ~~~~~pgv~~~L---~~~g~~l~IvTn~~~~ 164 (233)
+..++|.+.+++ ++.|+.+.|.||+...
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 344678888888 6789999999999754
No 266
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=47.26 E-value=10 Score=26.11 Aligned_cols=14 Identities=29% Similarity=0.427 Sum_probs=12.7
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.++.+-|||.+||+
T Consensus 42 ~lvL~eDGT~Vd~E 55 (78)
T cd06539 42 TLVLEEDGTVVDTE 55 (78)
T ss_pred EEEEeCCCCEEccH
Confidence 57889999999999
No 267
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=46.82 E-value=69 Score=26.58 Aligned_cols=70 Identities=23% Similarity=0.332 Sum_probs=50.5
Q ss_pred CCCCCHHHHH----hcCCCeEEEEeCCcHH-----HHHHHHHHhcCCCCCCCeEEeCCC--C-CH-HHHHHHhcCCcCcc
Q 026770 139 RFYPGIPDAL----KFASSRIYIVTTKQSR-----FADALLRELAGVTIPPDRIYGLGT--G-PK-VEVLKQLQKKPELQ 205 (233)
Q Consensus 139 ~~~pgv~~~L----~~~g~~l~IvTn~~~~-----~~~~~l~~~~gl~~~f~~iv~~~~--~-pk-~~~l~~l~~~p~~~ 205 (233)
.+.|++.-.| ++.|++-.|+...... .++..++.+ |+.-.|...+|+=. + |. .+.++++|. |+--
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~-gi~~~~P~~~CsL~~~~~p~i~~F~~~fGk-P~~e 136 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEF-GIEVEFPKPFCSLEENGNPQIDEFAEYFGK-PKVE 136 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhc-CceeecCccccccCCCCChhHHHHHHHhCC-ceEE
Confidence 5778887666 4589999998887776 888999996 99888888888733 2 54 456777774 4444
Q ss_pred CCceEEEcC
Q 026770 206 GMTLHFVED 214 (233)
Q Consensus 206 ~~~~l~VGD 214 (233)
+.|+|
T Consensus 137 ----i~v~~ 141 (217)
T PF02593_consen 137 ----IEVEN 141 (217)
T ss_pred ----EEecC
Confidence 55554
No 268
>PTZ00445 p36-lilke protein; Provisional
Probab=46.64 E-value=8 Score=32.01 Aligned_cols=14 Identities=29% Similarity=0.354 Sum_probs=12.7
Q ss_pred CceeEeecCccccC
Q 026770 2 ADLYALDFDGVLCD 15 (233)
Q Consensus 2 ~~~viFD~DGTL~D 15 (233)
.++|++|||-||++
T Consensus 43 Ik~Va~D~DnTlI~ 56 (219)
T PTZ00445 43 IKVIASDFDLTMIT 56 (219)
T ss_pred CeEEEecchhhhhh
Confidence 37999999999997
No 269
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=42.49 E-value=13 Score=25.58 Aligned_cols=14 Identities=29% Similarity=0.294 Sum_probs=12.7
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|+++-|||.+|++
T Consensus 42 ~lvL~eDGTeVddE 55 (78)
T cd01615 42 TLVLEEDGTEVDDE 55 (78)
T ss_pred EEEEeCCCcEEccH
Confidence 47899999999998
No 270
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=41.89 E-value=89 Score=27.74 Aligned_cols=31 Identities=10% Similarity=0.266 Sum_probs=24.0
Q ss_pred cCCCCCCHHHHHh---cCC-CeEEEEeCCcHHHHH
Q 026770 137 ANRFYPGIPDALK---FAS-SRIYIVTTKQSRFAD 167 (233)
Q Consensus 137 ~~~~~pgv~~~L~---~~g-~~l~IvTn~~~~~~~ 167 (233)
...++|||..+.+ +.| .++.-+||++.....
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~ 228 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFP 228 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHH
Confidence 3479999998882 334 899999999987653
No 271
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=41.15 E-value=21 Score=31.16 Aligned_cols=39 Identities=26% Similarity=0.303 Sum_probs=26.8
Q ss_pred CCCCCHHHHH---hcC----CCeEEEEeCCc---HHH-HHHHHHHhcCCCC
Q 026770 139 RFYPGIPDAL---KFA----SSRIYIVTTKQ---SRF-ADALLRELAGVTI 178 (233)
Q Consensus 139 ~~~pgv~~~L---~~~----g~~l~IvTn~~---~~~-~~~~l~~~~gl~~ 178 (233)
.++||+.++| +.+ |++..++||.. ... ++...+.+ |+.-
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l-G~~~ 65 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL-GVDV 65 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc-CCCC
Confidence 3578888877 456 99999999986 333 34444774 7753
No 272
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=40.97 E-value=16 Score=31.23 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.4
Q ss_pred CceeEeecCccccCCc
Q 026770 2 ADLYALDFDGVLCDSC 17 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~ 17 (233)
+|+++.|+|.||+-|.
T Consensus 89 kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSS 104 (262)
T ss_pred CceEEEeCCCcccccc
Confidence 5899999999999877
No 273
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=40.96 E-value=16 Score=31.23 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=13.5
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
++++||+||||.+..
T Consensus 159 ~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 159 KAVIFDIDGTLAKMG 173 (300)
T ss_pred CEEEEECCCcCcCCC
Confidence 579999999999876
No 274
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=40.71 E-value=14 Score=25.54 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=12.6
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|+++-|||.+|++
T Consensus 44 ~lvL~eDGT~VddE 57 (80)
T cd06536 44 TLVLAEDGTIVEDE 57 (80)
T ss_pred EEEEecCCcEEccH
Confidence 47799999999998
No 275
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=40.09 E-value=40 Score=28.02 Aligned_cols=47 Identities=21% Similarity=0.340 Sum_probs=32.3
Q ss_pred CCCCCHHHHH---hcCCCeEEEEeCCcHHHHHH---HHHHhcCCCCCCCeEEeC
Q 026770 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADA---LLRELAGVTIPPDRIYGL 186 (233)
Q Consensus 139 ~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~---~l~~~~gl~~~f~~iv~~ 186 (233)
.+.||+.+.| +.++.++=.+||...++-+. .|.++ |++-.-+.|+++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rl-gf~v~eeei~ts 75 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRL-GFDVSEEEIFTS 75 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHh-CCCccHHHhcCc
Confidence 4789999998 56889999999987765544 44453 665333445544
No 276
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=39.10 E-value=53 Score=31.03 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=35.0
Q ss_pred cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCeEEeCCCCCH-HHHHHHhcCCcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 150 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPK-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~iv~~~~~pk-~~~l~~l~~~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
..+-+++|++-.+....-..+..++++. ++. ++....-. ...++++.... .. ++|||... ...|++. ||
T Consensus 95 ~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~-~~~~~~~e~~~~~~~l~~~G-~~----~viG~~~~-~~~A~~~-gl 164 (526)
T TIGR02329 95 RIASSIGVVTHQDTPPALRRFQAAFNLD--IVQ-RSYVTEEDARSCVNDLRARG-IG----AVVGAGLI-TDLAEQA-GL 164 (526)
T ss_pred hcCCcEEEEecCcccHHHHHHHHHhCCc--eEE-EEecCHHHHHHHHHHHHHCC-CC----EEECChHH-HHHHHHc-CC
Confidence 4456788888655433333333332443 222 22111101 23344443221 23 79999955 5666655 88
Q ss_pred cCC
Q 026770 229 DGW 231 (233)
Q Consensus 229 ~~~ 231 (233)
.+|
T Consensus 165 ~~i 167 (526)
T TIGR02329 165 HGV 167 (526)
T ss_pred ceE
Confidence 775
No 277
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=38.97 E-value=11 Score=25.59 Aligned_cols=10 Identities=50% Similarity=0.823 Sum_probs=8.8
Q ss_pred eEeecCcccc
Q 026770 5 YALDFDGVLC 14 (233)
Q Consensus 5 viFD~DGTL~ 14 (233)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 4499999999
No 278
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=38.72 E-value=53 Score=31.16 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=14.6
Q ss_pred EEEcCChhhHHHHHhCCCCcCC
Q 026770 210 HFVEDRLATLKNVIKEPELDGW 231 (233)
Q Consensus 210 l~VGDs~~dv~aA~~~~~~~~~ 231 (233)
++|||... .+.|++. |+.|+
T Consensus 158 ~vvG~~~~-~~~A~~~-g~~g~ 177 (538)
T PRK15424 158 AVVGAGLI-TDLAEEA-GMTGI 177 (538)
T ss_pred EEEcCchH-HHHHHHh-CCceE
Confidence 79999776 5666665 77765
No 279
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=37.36 E-value=1.1e+02 Score=28.54 Aligned_cols=88 Identities=17% Similarity=0.144 Sum_probs=56.5
Q ss_pred hcCCCCCCHHHH--H---hcCCCeEEEEeCC--cHHHHHHHHHHhcCCCCCCCeEEeCCCC--CH------HHHHHHhcC
Q 026770 136 GANRFYPGIPDA--L---KFASSRIYIVTTK--QSRFADALLRELAGVTIPPDRIYGLGTG--PK------VEVLKQLQK 200 (233)
Q Consensus 136 ~~~~~~pgv~~~--L---~~~g~~l~IvTn~--~~~~~~~~l~~~~gl~~~f~~iv~~~~~--pk------~~~l~~l~~ 200 (233)
+...+||...-. . .+.+.++.++|.. +...++..|..+ |.+.+=--++.+... .| ..+++.-.+
T Consensus 94 EKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~-g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnV 172 (635)
T COG5610 94 EKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF-GPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENV 172 (635)
T ss_pred ceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc-CCCccCceeeecceeehhcccchHHHHHHhhcCC
Confidence 344677876543 2 3678999999985 466678888885 876443335555432 22 235555567
Q ss_pred CcCccCCceEEEcCChhhHHHHHhCCCC
Q 026770 201 KPELQGMTLHFVEDRLATLKNVIKEPEL 228 (233)
Q Consensus 201 ~p~~~~~~~l~VGDs~~dv~aA~~~~~~ 228 (233)
+|..- +.+||....-..--++.|+
T Consensus 173 d~~~w----~H~GDN~~aD~l~pk~LgI 196 (635)
T COG5610 173 DPKKW----IHCGDNWVADYLKPKNLGI 196 (635)
T ss_pred Chhhe----EEecCchhhhhcCccccch
Confidence 77777 9999998855554444454
No 280
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=36.90 E-value=17 Score=32.32 Aligned_cols=13 Identities=23% Similarity=0.583 Sum_probs=12.0
Q ss_pred ceeEeecCccccC
Q 026770 3 DLYALDFDGVLCD 15 (233)
Q Consensus 3 ~~viFD~DGTL~D 15 (233)
++|-||||.||+-
T Consensus 13 ~~~GFDmDyTLa~ 25 (343)
T TIGR02244 13 QVFGFDMDYTLAQ 25 (343)
T ss_pred CEEEECccccccc
Confidence 7899999999995
No 281
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=36.83 E-value=96 Score=25.21 Aligned_cols=15 Identities=40% Similarity=0.456 Sum_probs=13.8
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
++++.|+||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 799999999999975
No 282
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=36.08 E-value=19 Score=24.90 Aligned_cols=14 Identities=36% Similarity=0.309 Sum_probs=12.7
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|+.+-|||.+|++
T Consensus 41 ~lvL~eDGT~Vd~E 54 (79)
T cd06538 41 SLVLDEDGTGVDTE 54 (79)
T ss_pred EEEEecCCcEEccH
Confidence 47889999999998
No 283
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=36.03 E-value=18 Score=31.98 Aligned_cols=11 Identities=55% Similarity=0.869 Sum_probs=0.0
Q ss_pred eeEeecCcccc
Q 026770 4 LYALDFDGVLC 14 (233)
Q Consensus 4 ~viFD~DGTL~ 14 (233)
+++||+||+|+
T Consensus 37 gfafDIDGVL~ 47 (389)
T KOG1618|consen 37 GFAFDIDGVLF 47 (389)
T ss_pred eEEEecccEEE
No 284
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=35.95 E-value=2.8e+02 Score=24.29 Aligned_cols=27 Identities=30% Similarity=0.117 Sum_probs=19.6
Q ss_pred CceeEeecCccccCCcchhHHHHHHHH
Q 026770 2 ADLYALDFDGVLCDSCGESSLSAVKAA 28 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~~~~~~~a~~~~ 28 (233)
+|+|++|+||||+|..+..+..+..+.
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL 27 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQAL 27 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHH
Confidence 368999999999997655555554443
No 285
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=35.56 E-value=12 Score=30.02 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=33.2
Q ss_pred cCCCCCCHHHHHhcCCCeEEEEeCCcHHHHHH-------HHHHhcCCCCCCCeEEeCCCCCHHHHHHHhcCCcCccCCce
Q 026770 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADA-------LLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTL 209 (233)
Q Consensus 137 ~~~~~pgv~~~L~~~g~~l~IvTn~~~~~~~~-------~l~~~~gl~~~f~~iv~~~~~pk~~~l~~l~~~p~~~~~~~ 209 (233)
+..+.|+....++++|++++++...-....-. ..+. +-..||.|...+. -+.+-+.++|.+++..
T Consensus 103 EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~---~l~~f~~i~aqs~-~da~r~~~lG~~~~~v---- 174 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRP---LLSRFDRILAQSE-ADAERFRKLGAPPERV---- 174 (186)
T ss_dssp S----HHHHHH-----S-EEEEEE--------------HHHHH---HGGG-SEEEESSH-HHHHHHHTTT-S--SE----
T ss_pred ccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHH---HHHhCCEEEECCH-HHHHHHHHcCCCcceE----
Confidence 34677877777788999999998755432211 2222 3356888877653 1456788899988887
Q ss_pred EEEcCChhhH
Q 026770 210 HFVEDRLATL 219 (233)
Q Consensus 210 l~VGDs~~dv 219 (233)
...||-..|.
T Consensus 175 ~v~GnlKfd~ 184 (186)
T PF04413_consen 175 HVTGNLKFDQ 184 (186)
T ss_dssp EE---GGG--
T ss_pred EEeCcchhcc
Confidence 8999887764
No 286
>PLN02423 phosphomannomutase
Probab=34.57 E-value=37 Score=28.36 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=18.2
Q ss_pred ceeEeecCccccCCcchhHHHHHHHHh
Q 026770 3 DLYALDFDGVLCDSCGESSLSAVKAAK 29 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~~~~~~~a~~~~~ 29 (233)
.+++||+||||+|+.+++...+..+..
T Consensus 8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~ 34 (245)
T PLN02423 8 VIALFDVDGTLTAPRKEATPEMLEFMK 34 (245)
T ss_pred eEEEEeccCCCcCCCCcCCHHHHHHHH
Confidence 345599999999988655544444333
No 287
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=33.62 E-value=24 Score=24.29 Aligned_cols=14 Identities=29% Similarity=0.273 Sum_probs=12.1
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.++++=|||.||++
T Consensus 42 ~lvL~eDGT~VddE 55 (78)
T PF02017_consen 42 RLVLEEDGTEVDDE 55 (78)
T ss_dssp EEEETTTTCBESSC
T ss_pred EEEEeCCCcEEccH
Confidence 36778999999998
No 288
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=30.35 E-value=2.8e+02 Score=23.54 Aligned_cols=86 Identities=14% Similarity=0.161 Sum_probs=53.3
Q ss_pred CCCCCHHHHH---h---cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCC--eEEeCCCC-CHHHHHHHhcCCcCccCCce
Q 026770 139 RFYPGIPDAL---K---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-PKVEVLKQLQKKPELQGMTL 209 (233)
Q Consensus 139 ~~~pgv~~~L---~---~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~--~iv~~~~~-pk~~~l~~l~~~p~~~~~~~ 209 (233)
.++|+..+++ + +.|+.+.-+++.+...++... .+ |-.-... .-+|+..+ .+++.++.+...++..
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~-~~-G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp---- 177 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLE-DA-GCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP---- 177 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-Hc-CCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc----
Confidence 5789999999 3 459988845555556565544 43 7654333 44555544 4577777665544455
Q ss_pred EEEcC---ChhhHHHHHhCCCCcCC
Q 026770 210 HFVED---RLATLKNVIKEPELDGW 231 (233)
Q Consensus 210 l~VGD---s~~dv~aA~~~~~~~~~ 231 (233)
+++|= ++.|+..|.+. |-||+
T Consensus 178 VI~egGI~tpeda~~Amel-GAdgV 201 (248)
T cd04728 178 VIVDAGIGTPSDAAQAMEL-GADAV 201 (248)
T ss_pred EEEeCCCCCHHHHHHHHHc-CCCEE
Confidence 67663 46777777775 55554
No 289
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=30.21 E-value=2.5e+02 Score=23.86 Aligned_cols=61 Identities=10% Similarity=0.053 Sum_probs=33.9
Q ss_pred cCCCeEEEEeCCcH---HHHHHHHHHh-cCCCCCCCeEEeCCCC-CH----HHHHHHhcCCcCccCCceEEEcCChh
Q 026770 150 FASSRIYIVTTKQS---RFADALLREL-AGVTIPPDRIYGLGTG-PK----VEVLKQLQKKPELQGMTLHFVEDRLA 217 (233)
Q Consensus 150 ~~g~~l~IvTn~~~---~~~~~~l~~~-~gl~~~f~~iv~~~~~-pk----~~~l~~l~~~p~~~~~~~l~VGDs~~ 217 (233)
+.++.+-++|++.+ +.+....... -.|..-|-.++|.+.. |- .+.+...++ -| +.|||.+.
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~i---P~----IvI~D~p~ 98 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGI---PC----IVIGDAPG 98 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCC---CE----EEEcCCCc
Confidence 45788888888653 3333333321 0344344344444433 43 345555555 37 99999986
No 290
>PTZ00174 phosphomannomutase; Provisional
Probab=28.08 E-value=45 Score=27.78 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=19.1
Q ss_pred ceeEeecCccccCCcchhHHHHHHH
Q 026770 3 DLYALDFDGVLCDSCGESSLSAVKA 27 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~~~~~~~a~~~ 27 (233)
|+|+||+||||+++.++....+..+
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~a 30 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDT 30 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHH
Confidence 8999999999999976554444433
No 291
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=27.52 E-value=30 Score=22.73 Aligned_cols=16 Identities=25% Similarity=0.094 Sum_probs=14.3
Q ss_pred CceeEeecCccccCCc
Q 026770 2 ADLYALDFDGVLCDSC 17 (233)
Q Consensus 2 ~~~viFD~DGTL~Ds~ 17 (233)
-.-|+||=|+.-+||.
T Consensus 24 es~iiFDNded~tdSa 39 (65)
T PF06117_consen 24 ESDIIFDNDEDKTDSA 39 (65)
T ss_pred CCCeeecCCCcccchH
Confidence 4679999999999998
No 292
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.52 E-value=1.2e+02 Score=25.53 Aligned_cols=29 Identities=24% Similarity=0.165 Sum_probs=25.4
Q ss_pred hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
++.|++++.+|++....+...-+.+ |+..
T Consensus 36 ~d~G~~Vi~~SSKT~aE~~~l~~~l-~v~~ 64 (274)
T COG3769 36 KDAGVPVILCSSKTRAEMLYLQKSL-GVQG 64 (274)
T ss_pred HHcCCeEEEeccchHHHHHHHHHhc-CCCC
Confidence 7899999999999999888888885 8864
No 293
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=26.14 E-value=1.8e+02 Score=24.61 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=28.9
Q ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026770 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVT 177 (233)
Q Consensus 144 v~~~L~~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 177 (233)
++++|++.|+|..|+|..+..-....++. .|+.
T Consensus 79 ARE~l~~~~iP~IvI~D~p~~K~~d~l~~-~g~G 111 (277)
T PRK00994 79 AREILKAAGIPCIVIGDAPGKKVKDAMEE-QGLG 111 (277)
T ss_pred HHHHHHhcCCCEEEEcCCCccchHHHHHh-cCCc
Confidence 88899999999999999998877888888 4884
No 294
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=26.01 E-value=5.2e+02 Score=27.15 Aligned_cols=107 Identities=15% Similarity=0.215 Sum_probs=63.0
Q ss_pred hhcccCeeeechhHHHHHHHHHhhhCcccccccCcCCCCHHHHHHHhhhhHHHHHHhcCCChHHH-HHHHHHHHHHHHHH
Q 026770 51 MHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDAL-VDLFGKVRDEWMDK 129 (233)
Q Consensus 51 ~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 129 (233)
...+..+...|.+-++++.. -++.++ .+.|.+...++...-. ++++. .+.++.+.+...-.
T Consensus 582 ~~Hl~~yA~eGLRTLc~A~r----------------~l~e~e-Y~~w~~~~~~A~ts~~-~Re~~L~e~ae~iEk~L~LL 643 (1151)
T KOG0206|consen 582 QEHLEEYATEGLRTLCLAYR----------------ELDEEE-YEEWNERYNEAKTSLT-DREELLDEVAEEIEKDLILL 643 (1151)
T ss_pred HHHHHHHHhhhhhHhhhhhh----------------ccCHHH-HHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHhcchhh
Confidence 45667777777787773222 133333 4566665555554444 55443 33333333332210
Q ss_pred HHHhhhhcCCCCCCHHHHH---hcCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026770 130 DLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (233)
Q Consensus 130 y~~~~~~~~~~~pgv~~~L---~~~g~~l~IvTn~~~~~~~~~l~~~~gl~~ 178 (233)
- .-.-+.++-+||++.+ +++|+|+-++|+--.+.+..+--.+ ++.+
T Consensus 644 G--ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC-~Ll~ 692 (1151)
T KOG0206|consen 644 G--ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC-RLLR 692 (1151)
T ss_pred c--ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh-cCCC
Confidence 0 0011226778888888 6899999999998888888887774 6543
No 295
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=25.21 E-value=34 Score=31.12 Aligned_cols=15 Identities=20% Similarity=0.264 Sum_probs=12.7
Q ss_pred ceeEeecCccccCCc
Q 026770 3 DLYALDFDGVLCDSC 17 (233)
Q Consensus 3 ~~viFD~DGTL~Ds~ 17 (233)
.+|-||||+||.--.
T Consensus 28 ~~~GfdmDyTL~~Y~ 42 (424)
T KOG2469|consen 28 GIVGFDMDYTLARYN 42 (424)
T ss_pred cEEeeccccchhhhc
Confidence 689999999998544
No 296
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=24.77 E-value=2e+02 Score=25.93 Aligned_cols=68 Identities=19% Similarity=0.140 Sum_probs=46.3
Q ss_pred CCCHHHHHh--cCCCeEEEEeCCcHHHHHHHHHHhcCCCCCCCe-EEeCCCC----CHHHHHHHhcCCcCccCCceEEEc
Q 026770 141 YPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDR-IYGLGTG----PKVEVLKQLQKKPELQGMTLHFVE 213 (233)
Q Consensus 141 ~pgv~~~L~--~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~f~~-iv~~~~~----pk~~~l~~l~~~p~~~~~~~l~VG 213 (233)
.||+.-+|. .+.+.++|.|+...-.+..+++++ +=..++.. +++.... ++..-+.+++-+++.+ |+|+
T Consensus 216 RPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~l-DP~g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kV----ivVd 290 (393)
T KOG2832|consen 216 RPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDAL-DPKGYISYKLFRGATKYEEGHHVKDLSKLNRDLQKV----IVVD 290 (393)
T ss_pred CchHHHHHHhhcccceEEEEecCCccchhhhHhhc-CCcceEEEEEecCcccccCccchhhhhhhcccccee----EEEE
Confidence 477777772 566899999998888888888885 55555554 3443332 4444577777777777 7775
No 297
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=24.29 E-value=38 Score=27.64 Aligned_cols=12 Identities=25% Similarity=0.467 Sum_probs=10.7
Q ss_pred ceeEeecCcccc
Q 026770 3 DLYALDFDGVLC 14 (233)
Q Consensus 3 ~~viFD~DGTL~ 14 (233)
..|-||||||+.
T Consensus 59 ~~v~~D~~GT~m 70 (271)
T PF06901_consen 59 HTVTFDFQGTKM 70 (271)
T ss_pred eeEEEeccceEE
Confidence 568999999997
No 298
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=20.63 E-value=4.2e+02 Score=20.74 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=12.1
Q ss_pred eeEeecCccccCCc
Q 026770 4 LYALDFDGVLCDSC 17 (233)
Q Consensus 4 ~viFD~DGTL~Ds~ 17 (233)
.|++|+||||.-|-
T Consensus 1 VVvsDIDGTiT~SD 14 (157)
T PF08235_consen 1 VVVSDIDGTITKSD 14 (157)
T ss_pred CEEEeccCCcCccc
Confidence 48999999999775
No 299
>PHA03321 tegument protein VP11/12; Provisional
Probab=20.41 E-value=7.9e+02 Score=23.92 Aligned_cols=101 Identities=14% Similarity=0.033 Sum_probs=59.6
Q ss_pred cCccccCCcchhHHHHHHHHhhhCCCCCCCCCccchHHHHHHhhcccCeeeechhHHHHHHHHHhhhCcccccccCcCCC
Q 026770 9 FDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGL 88 (233)
Q Consensus 9 ~DGTL~Ds~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 88 (233)
++|+|+=|-.+...+|+.+..+....+.... -++-.....+-..-.....+.+++..+. |=
T Consensus 36 ~~GCLLPtP~~~l~aAV~AL~~~~e~l~p~~-----L~~~~R~~~L~~~~~N~VPESlIv~~~~--------------gD 96 (694)
T PHA03321 36 FGGCLLPTPEGLLGAAVGALRQRSDDLQPAF-----LTGADRAAQLAARRHNSVPESLVVDGIT--------------GD 96 (694)
T ss_pred hcccccCChHHHHHHHHHHHHHHHhhcCccc-----hhhHHHHHHHHhcccCCCCchhhhhhhc--------------cC
Confidence 5799999988888888877766543332210 1222222222222223333333223332 22
Q ss_pred CHHHHHHHhhhhHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 026770 89 TVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMD 128 (233)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (233)
+..++...|.......+.+.+++.+.+...+...|-.|.+
T Consensus 97 ~~~EY~r~Y~~aakr~L~~~~LS~~~v~R~ila~YWkYLq 136 (694)
T PHA03321 97 PHCEYIKHYAAAALESLAEAGASSGQLSRAILAQYWKYLQ 136 (694)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 3456778888889999999999999887776655444443
Done!