BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026776
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 164/228 (71%), Gaps = 9/228 (3%)
Query: 1 MTTTNGVASLR---LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVT 57
M GV+ LR +I I + P D+++VHVLAVDDS VDR VIERLL I+SCKVT
Sbjct: 1 MAKDGGVSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVT 60
Query: 58 AVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPV 117
AVDSG RAL+FLGLD++++ FD LKVDLIITDYCMPGMTGYELLKKIK+S++ +E+PV
Sbjct: 61 AVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPV 120
Query: 118 VIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARE 177
VIMSSEN++ RIDRCLE+GAEDF++KPVKL+DVKR++ YLTRDV + EG NKRK
Sbjct: 121 VIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTRDVKVAAEG---NKRKLTT 177
Query: 178 SCDLS--SSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLDSP 223
S+ S+ +S S+ SP S L+ S P S S +DSP
Sbjct: 178 PPPPPPLSATSSMESSDSTVESPLSMVDDEDSLTMS-PESATSLVDSP 224
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 230 bits (586), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 141/181 (77%), Gaps = 8/181 (4%)
Query: 1 MTTTNGVASLR----LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKV 56
M GV+ LR + I G + +P D +EVHVLAVDDS VDR VIERLL I+SCKV
Sbjct: 1 MARDGGVSCLRRSEMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKV 60
Query: 57 TAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIP 116
TAVDSG RAL+FLGLD E++ FD LKVDLIITDYCMPGMTGYELLKKIK+SS RE+P
Sbjct: 61 TAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVP 120
Query: 117 VVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKAR 176
VVIMSSEN+L RIDRCLE+GA+DF++KPVKL+DVKR++ +LT+DV L N NKRK
Sbjct: 121 VVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSNG----NKRKLP 176
Query: 177 E 177
E
Sbjct: 177 E 177
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/145 (71%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E+ GF+ LKV+LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
TDY MPGMTGYELLKKIK+SSA RE+PVVIMSSENIL RIDRCLE+GAEDF++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 150 VKRIKDYLTRDVNLGNEGRGINKRK 174
VKR++D L + +L + I KR+
Sbjct: 145 VKRLRDSLMKVEDLSF-TKSIQKRE 168
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLKVDLI 88
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+ LK++LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 89 ITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 148
+TDY MPGMTGYELLKKIK+SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
Query: 149 DVKRIKDYLTR 159
DVKR++D L +
Sbjct: 145 DVKRLRDSLMK 155
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 197 bits (501), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 115/131 (87%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDSFVDRKVIERLL IS+CKVT V+SG RALQ+LGLD + +G LKV+LI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 89 ITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 148
+TDY MPG+TGYELLKKIK+SSALREIPVVIMSSENI RI++C+ +GAE+F++KPVKL+
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 149 DVKRIKDYLTR 159
DVKR+K+ + R
Sbjct: 137 DVKRLKELIMR 147
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/162 (63%), Positives = 127/162 (78%), Gaps = 6/162 (3%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G DL+ + T E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD + +
Sbjct: 14 GGDLTVT-TPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS 72
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAE 138
LKV+LI+TDY MPG++GY+LLKKIK+SSA RE+PVVIMSSENIL RI CL++GAE
Sbjct: 73 NLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAE 132
Query: 139 DFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGI---NKRKARE 177
+F++KPVKL+DVKRIK + R N E + + NKRK +E
Sbjct: 133 EFLLKPVKLADVKRIKQLIMR--NEAEECKILSHSNKRKLQE 172
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 108/141 (76%), Gaps = 10/141 (7%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN---------- 78
+ HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL + N
Sbjct: 8 QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAE 138
++V+LIITDYCMPGMTGY+LLKK+K+SSA R+IPVVIMSSEN+ ARI RCLE+GAE
Sbjct: 68 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 127
Query: 139 DFIVKPVKLSDVKRIKDYLTR 159
+F +KPV+L+D+ ++K ++ +
Sbjct: 128 EFFLKPVRLADLNKLKPHMMK 148
>sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16 OS=Arabidopsis thaliana
GN=ARR16 PE=1 SV=1
Length = 164
Score = 173 bits (438), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 110/141 (78%), Gaps = 3/141 (2%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSIN 78
L EE+HVLAVDD+ +DRK++ERLL IS CKVT ++ RAL++LGL D+ Q I+
Sbjct: 19 HHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHID 78
Query: 79 GF--DGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDG 136
+ +KV LIITDYCMPGMTG+ELLKK+K+SS LRE+PVVIMSSENI RI++CL G
Sbjct: 79 ALTCNVMKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASG 138
Query: 137 AEDFIVKPVKLSDVKRIKDYL 157
A+ F+ KP+KL+DV+++K +L
Sbjct: 139 AQMFMQKPLKLADVEKLKCHL 159
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG-LKVD 86
EE+HVLAVDD+ +DRK++ER+L ISSCKVT ++G RAL++LGL + Q + +KV+
Sbjct: 18 EELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVN 77
Query: 87 LIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 146
LIITDYCMPGMTG+ELLKK+K+SS L+E+PVVI+SSENI RI++CL GA+ F+ KP+K
Sbjct: 78 LIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLK 137
Query: 147 LSDVKRIKDYL 157
LSDV+++K +L
Sbjct: 138 LSDVEKLKCHL 148
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 107/137 (78%), Gaps = 8/137 (5%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGF-------DG 82
HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL ++ N
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIV 142
++++LIITDYCMPGMTGY+LLKK+K+S+A R IPVVIMSSEN+ ARI RCLE+GAE+F +
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129
Query: 143 KPVKLSDVKRIKDYLTR 159
KPVKL+D+ ++K ++ +
Sbjct: 130 KPVKLADLTKLKPHMMK 146
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+++V+ VDD V ++ R+L S +V AVD ++AL L + + +DLI
Sbjct: 15 KINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRD---------NIDLI 65
Query: 89 ITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 148
ITDY MPGM G +L K+I + +PV++MSS+ + + L GA FI KP+ +
Sbjct: 66 ITDYYMPGMNGLQLKKQI--TQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPT 121
Query: 149 DVKRIKDY 156
D+ +I +
Sbjct: 122 DLTKIYQF 129
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 79/134 (58%), Gaps = 9/134 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ + R++I LL KV AV G A + L +E+S N +DLI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL---KEKSHN------IDLIL 87
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ +P ++G+ LL + + A + IPV++MSS++ + + +C+ GA D+++KP++ ++
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNE 147
Query: 150 VKRIKDYLTRDVNL 163
+K + ++ R + L
Sbjct: 148 LKNLWQHVWRRLTL 161
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ MPG++G LL +I + + + IPV++MSS + + + +CL GA DF+VKP++ ++
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 150 VKRIKDYLTR 159
+K + ++ R
Sbjct: 173 LKNLWQHVWR 182
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 72.0 bits (175), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ MPG++G LL +I + + + IPV++MSS + + + +CL GA DF+VKP++ ++
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 150 VKRIKDYLTR 159
+K + ++ R
Sbjct: 173 LKNLWQHVWR 182
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +VTAV A + L ++E+S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP +G LL KI L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 152 RIKDYLTR 159
+ ++ R
Sbjct: 177 NLWQHVWR 184
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L ++ Q+ +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL--EDLQN-------HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP ++G LL KI ++IPV++MSS + + + +CL GA DF+VKP++ +++K
Sbjct: 134 VVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELK 193
Query: 152 RIKDYLTR 159
+ ++ R
Sbjct: 194 NLWQHVWR 201
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L ++ Q+ +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL--EDLQN-------HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP ++G LL KI ++IPV++MSS + + + +CL GA DF+VKP++ +++K
Sbjct: 134 VVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELK 193
Query: 152 RIKDYLTR 159
+ ++ R
Sbjct: 194 NLWQHVWR 201
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R +I LL +V A G +A L +E+S N +DL++
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDIL---KEKSFN------IDLVL 93
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ +P M+G+ LL I + A + IPV++MSS + ++ + +C+ GA DF+VKP++ ++
Sbjct: 94 TEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNE 153
Query: 150 VKRIKDYLTR 159
++ + ++ R
Sbjct: 154 LRNLWQHVWR 163
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R++I LL S +V AV G +A + L E VDLI+
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE---------SVDLIL 100
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ +P ++GY LL I + + IPV++MS+++ + + +C+ GA D++VKP++ ++
Sbjct: 101 TEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNE 160
Query: 150 VKRIKDYLTR 159
++ + ++ R
Sbjct: 161 LRNLWQHVWR 170
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V +G +A + L + +N +D+++
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL-----EDLNNH----IDIVL 128
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
T+ MP ++G LL KI + + R IPV++MSS + + + +CL GA DF+VKP++ ++
Sbjct: 129 TEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 188
Query: 150 VKRIKDYLTR 159
+K + ++ R
Sbjct: 189 LKILWQHVWR 198
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 15/150 (10%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+SD D + SPS +V +L DD V RK++ LL VT V +G A +++
Sbjct: 148 VSDFSDEY--SPS---KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKG 202
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILAR-IDR 131
++ K DL++TD MP +TG++LL++I D R IPV++MS + + +
Sbjct: 203 QQ---------KYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYAND 253
Query: 132 CLEDGAEDFIVKPVKLSDVKRIKDYLTRDV 161
++ G +DF+ KP+ +K+ D + + +
Sbjct: 254 TIKIGGQDFLTKPIAKELLKKKIDTVLQSI 283
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD K++E LL VT + ++AL+ L ++ K DL+I+D
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKN---------KFDLVISD 69
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP M G++LL+ + ++PV+++S+ + + + + GA D+++KPV++ ++K
Sbjct: 70 VDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELK 126
Query: 152 RIKDYLTR---DVNLGNEGRG 169
I ++ R D N G+ G
Sbjct: 127 NIWQHVVRSRFDKNRGSNNNG 147
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ ++ +++ ++L C+V +V SG AL IN G D I D
Sbjct: 1571 VLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALA--------KINQSSGDSYDAIFLD 1622
Query: 92 YCMPGMTGYELLKKIKDSSALREIP--VVIMSSENILARID-RCLEDGAEDFIVKPVKLS 148
MP M G+++ +KI++ +P +I ++ N+ +C + G +DFI KP+K +
Sbjct: 1623 IQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFDAGMDDFISKPIKRA 1682
Query: 149 DVKR-IKDY 156
++K IK Y
Sbjct: 1683 EIKEIIKKY 1691
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD K++E++L S +VT R AL+ L + +G+D ++I
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL----RERKDGYD-----IVI 61
Query: 90 TDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 149
+D MP M G++LL+ + ++PV++MS + +R+ + ++ GA D+++KP+++ +
Sbjct: 62 SDVNMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 118
Query: 150 VKRIKDYLTR 159
+K I ++ R
Sbjct: 119 LKIIWQHVLR 128
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD ++ER+L +VT + AL L ++ NGFD ++I+D
Sbjct: 30 VLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL----RKNKNGFD-----IVISD 80
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP M G++LL+ + ++PV++MS+++ + + + + GA D+++KPV++ +K
Sbjct: 81 VHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALK 137
Query: 152 RIKDYLTR 159
I ++ R
Sbjct: 138 NIWQHVVR 145
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI 77
DGF D V +L D+ + LL+ S +VTAV S R+ + L +
Sbjct: 11 DGF----IDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAE----- 61
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGA 137
G +D+I+ + +P G ++L+ I LR IPV++MS ++ + + +CL+ GA
Sbjct: 62 ----GPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGA 117
Query: 138 EDFIVKPVKLSDVKRIKDYLTR 159
D++VKP++ +++ + ++ R
Sbjct: 118 ADYLVKPLRTNELLNLWTHMWR 139
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD ++++ LL VT + + AL+ L ++ K DL+I+D
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKN---------KFDLVISD 69
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP M G++LL+ + ++PV+++S+ + + + ++ GA D+++KPV++ ++K
Sbjct: 70 VDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELK 126
Query: 152 RIKDYLTR 159
I ++ R
Sbjct: 127 NIWQHVVR 134
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK---VTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+++V+ VDD+ V + R+L S + V AVD ++AL L + +
Sbjct: 15 KINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRD---------NI 65
Query: 86 DLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 145
DLIITDY MPGM G +L K+I + + V++MSS+ + + L GA FI KP+
Sbjct: 66 DLIITDYYMPGMNGLQLKKQI--TQEFGNLSVLVMSSD--PNKEEESLSCGAMGFIPKPI 121
Query: 146 KLSDVKRIKDY 156
+D+ +I +
Sbjct: 122 APTDLPKIYQF 132
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD ++ER+L +VT + AL L ++ +GFD ++I+D
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL----RKNKHGFD-----IVISD 89
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
MP M G++LL+ + ++PV++MS+++ + + + + GA D+++KPV++ +K
Sbjct: 90 VHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALK 146
Query: 152 RIKDYLTR 159
I ++ R
Sbjct: 147 NIWQHVVR 154
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D +V +L D + + RLL S +VT S R+ + L + + +
Sbjct: 24 DRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGE---------I 74
Query: 86 DLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 145
D+I+ + +P +++LK I + LR IP+++MS+ + ++ + +CL GA +++VKP+
Sbjct: 75 DIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPL 134
Query: 146 KLSDVKRIKDYLTR 159
+++++ + ++ R
Sbjct: 135 RMNELLNLWTHVWR 148
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ + L + ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED-----------YDAVI 510
Query: 90 TDYCMPGMTGYELLKKIK--DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 145
D MPGM G ++LK+++ +S +R PVV++S++ I C + GA F+ KPV
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 60.1 bits (144), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ + L + ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED-----------YDAVI 510
Query: 90 TDYCMPGMTGYELLKKIK--DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 145
D MPGM G ++LK+++ +S +R PVV++S++ I C + GA F+ KPV
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|A1W0A5|CHEY_CAMJJ Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176) GN=cheY PE=3
SV=1
Length = 130
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDDS R++I+ LT + V + G A L +E+ V ++IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVLIT 52
Query: 91 DYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 144
D+ MP M G EL+KK++ ++P++++++E A + L+ G ++IVKP
Sbjct: 53 DWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|P0C635|CHEY_CAMJE Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=cheY PE=3
SV=1
Length = 130
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDDS R++I+ LT + V + G A L +E+ V ++IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVLIT 52
Query: 91 DYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 144
D+ MP M G EL+KK++ ++P++++++E A + L+ G ++IVKP
Sbjct: 53 DWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|A8FMH1|CHEY_CAMJ8 Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=cheY
PE=3 SV=1
Length = 130
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDDS R++I+ LT + V + G A L +E+ V ++IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVLIT 52
Query: 91 DYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 144
D+ MP M G EL+KK++ ++P++++++E A + L+ G ++IVKP
Sbjct: 53 DWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 30 VHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ +L VDDS R++I+ L+ + V + G A + L + + + +
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKV----------L 50
Query: 89 ITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 144
ITD+ MP M G +L+KK++ S +EIP++++++E A + L+ G ++IVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+VL VD +F +++++ + +V+ +AL FL + + ++++I
Sbjct: 35 NVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE---------INIVIW 85
Query: 91 DYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 150
D+ MPG+ G + LK I +S L ++PVVIMS +N + + GA D++VKPVK +
Sbjct: 86 DFHMPGIDGLQALKSI--TSKL-DLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVM 142
Query: 151 KRIKDYLTR 159
I ++ R
Sbjct: 143 ANIWQHIVR 151
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 30 VHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ +L VDDS R++I+ L+ + V + G A + L + + + +
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKV----------L 50
Query: 89 ITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 144
ITD+ MP M G +L+KK++ + +EIP++++++E A + L+ G ++IVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q5HLN2|HSSR_STAEQ Heme response regulator HssR OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=hssR PE=3 SV=1
Length = 224
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 29/187 (15%)
Query: 30 VHVLAVDDSFVDRKVIERL---LTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ L VDD D+K+++ + L S + SG +L FL + VD
Sbjct: 2 INCLIVDD---DKKLLQYVSSHLERESIQTHTFTSGEASLDFL-----------ENKNVD 47
Query: 87 LIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 146
+ I D M GM G+EL + +KD IPV+++++ + L+ +R G +D++ KP +
Sbjct: 48 IAIVDIMMSGMDGFELCQTLKDDY---HIPVIMLTARDALSDKERAFLSGTDDYVTKPFE 104
Query: 147 LSD-VKRIKDYLTR-DVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRS 204
+ + + RIK L R +N NE + N L+ S + S + + P+ F+
Sbjct: 105 VKELLFRIKAVLRRYQINADNELQLGN-------LILNQSYMEITVGSKTMNLPNKEFQL 157
Query: 205 PSILSSS 211
+L+S+
Sbjct: 158 LFLLASN 164
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 45 IERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLK 104
++ L+T S +VT +SG A+ FL ++ + +DL+I D+ MP + G + L
Sbjct: 54 LKNLMTQYSYQVTKYESGEEAMAFLMKNKHE---------IDLVIWDFHMPDINGLDALN 104
Query: 105 KIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 145
I ++PVVIMS E + ++ GA DF+VKPV
Sbjct: 105 II---GKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPV 142
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+ + + H+L VDD RK+++ LT+ V+ +G AL+ F
Sbjct: 5 NKQNKRQHHLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKI-----------FTT 53
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSS-ENILARIDRCLEDGAEDFI 141
+DLII D MP + GY + ++I+ S +IP++++++ E++L ++ LE GA+D++
Sbjct: 54 HSIDLIILDVMMPKLDGYGVCQEIRKES---DIPIIMLTALEDVLDKVT-GLELGADDYV 109
Query: 142 VKPVKLSDVK-RIKDYLTR 159
+KP +++ RI+ L R
Sbjct: 110 IKPFSPRELEARIQSILRR 128
>sp|Q86AT9|DHKI_DICDI Hybrid signal transduction histidine kinase I OS=Dictyostelium
discoideum GN=dhkI-1 PE=3 SV=1
Length = 1736
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G ++S S VL +D+ +++K+I+ LLT +T G++AL F + +SI
Sbjct: 1539 GIEISGSQMIPQKVLVAEDNTMNQKLIKTLLTKRGFDITIAKDGKQALDFYHESKNKSI- 1597
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALR--EIPVVIMSSENILARIDRCLEDG 136
D I+ D MP ++G E I++ A IP++ +++ + ++ LE G
Sbjct: 1598 -----LYDCILMDIQMPILSGLEATCAIREIEANEGGHIPIIAVTAHAMKGDKEKFLESG 1652
Query: 137 AEDFIVKPV 145
+D++ KP+
Sbjct: 1653 VDDYVTKPI 1661
>sp|Q8CN92|HSSR_STAES Heme response regulator HssR OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=hssR PE=3 SV=1
Length = 224
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 29/187 (15%)
Query: 30 VHVLAVDDSFVDRKVIERL---LTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ L VDD D+K+++ + L S + SG +L FL + VD
Sbjct: 2 INCLIVDD---DKKLLQYVSSHLERESIQTHTFTSGEASLDFL-----------ENKNVD 47
Query: 87 LIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 146
+ I D M GM G+EL + +KD IPV+++++ + L+ +R G +D++ KP +
Sbjct: 48 IAIVDIMMSGMDGFELCQTLKDDY---HIPVIMLTARDALSDKERAFLSGTDDYVTKPFE 104
Query: 147 LSD-VKRIKDYLTR-DVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRS 204
+ + + RIK L R +N NE + N L+ S + S + + P+ F+
Sbjct: 105 VKELLFRIKAVLRRYQINADNELQLGN-------LILNQSYMEITVGSKTMNLPNKEFQL 157
Query: 205 PSILSSS 211
+L+S+
Sbjct: 158 LFLLASN 164
>sp|Q9A5I5|PLED_CAUCR Response regulator PleD OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=pleD PE=1 SV=1
Length = 454
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + +++E LT +V+ G AL D D+I+ D
Sbjct: 5 ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLP-----------DIILLD 53
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRC--LEDGAEDFIVKPV 145
MPGM G+ + +K+KD R IPVV++++ + R DR LE GA DF+ KP+
Sbjct: 54 VMMPGMDGFTVCRKLKDDPTTRHIPVVLITALD--GRGDRIQGLESGASDFLTKPI 107
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFI 141
G VDL+I + G ++ R++PV+ M + R+ + LE G D +
Sbjct: 193 GGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDIL 252
Query: 142 VKPVKLSDV----------KRIKDYLTRDVN 162
+P+ ++ KR DYL +++
Sbjct: 253 SRPIDPQELSARVKTQIQRKRYTDYLRNNLD 283
>sp|B8GZM2|PLED_CAUCN Response regulator PleD OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=pleD PE=1 SV=1
Length = 454
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + +++E LT +V+ G AL D D+I+ D
Sbjct: 5 ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLP-----------DIILLD 53
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRC--LEDGAEDFIVKPV 145
MPGM G+ + +K+KD R IPVV++++ + R DR LE GA DF+ KP+
Sbjct: 54 VMMPGMDGFTVCRKLKDDPTTRHIPVVLITALD--GRGDRIQGLESGASDFLTKPI 107
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFI 141
G VDL+I + G ++ R++PV+ M + R+ + LE G D +
Sbjct: 193 GGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDIL 252
Query: 142 VKPVKLSDV----------KRIKDYLTRDVN 162
+P+ ++ KR DYL +++
Sbjct: 253 SRPIDPQELSARVKTQIQRKRYTDYLRNNLD 283
>sp|P45606|PHOB_SHIDY Phosphate regulon transcriptional regulatory protein PhoB
OS=Shigella dysenteriae GN=phoB PE=3 SV=1
Length = 229
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDR 131
D + ++N + DLI+ D+ +PG +G + +K +K S R+IPVV++++ R
Sbjct: 34 DYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVR 93
Query: 132 CLEDGAEDFIVKPVKLSD-VKRIKDYLTR 159
LE GA+D+I KP + V RIK + R
Sbjct: 94 GLETGADDYITKPFSPKELVARIKAVMRR 122
>sp|P45607|PHOB_SHIFL Phosphate regulon transcriptional regulatory protein PhoB
OS=Shigella flexneri GN=phoB PE=3 SV=2
Length = 229
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDR 131
D + ++N + DLI+ D+ +PG +G + +K +K S R+IPVV++++ R
Sbjct: 34 DYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVR 93
Query: 132 CLEDGAEDFIVKPVKLSD-VKRIKDYLTR 159
LE GA+D+I KP + V RIK + R
Sbjct: 94 GLETGADDYITKPFSPKELVARIKAVMRR 122
>sp|P0AFJ5|PHOB_ECOLI Phosphate regulon transcriptional regulatory protein PhoB
OS=Escherichia coli (strain K12) GN=phoB PE=1 SV=1
Length = 229
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDR 131
D + ++N + DLI+ D+ +PG +G + +K +K S R+IPVV++++ R
Sbjct: 34 DYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVR 93
Query: 132 CLEDGAEDFIVKPVKLSD-VKRIKDYLTR 159
LE GA+D+I KP + V RIK + R
Sbjct: 94 GLETGADDYITKPFSPKELVARIKAVMRR 122
>sp|P0AFJ6|PHOB_ECO57 Phosphate regulon transcriptional regulatory protein PhoB
OS=Escherichia coli O157:H7 GN=phoB PE=3 SV=1
Length = 229
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDR 131
D + ++N + DLI+ D+ +PG +G + +K +K S R+IPVV++++ R
Sbjct: 34 DYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVR 93
Query: 132 CLEDGAEDFIVKPVKLSD-VKRIKDYLTR 159
LE GA+D+I KP + V RIK + R
Sbjct: 94 GLETGADDYITKPFSPKELVARIKAVMRR 122
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL +DD V+E LL S KVT + R A+ F+ LD Q VDL+I+D
Sbjct: 13 VLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI-LDNPQI--------VDLVISD 63
Query: 92 YCMPGMTGYELLKKIKDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 151
P G +L+++ IP VIM+S + + + +GA DF++KPV++ ++
Sbjct: 64 AFFPTEDGLLILQEVTSKFG---IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELS 120
Query: 152 RIKDYLTR 159
I ++ R
Sbjct: 121 NIWQHIFR 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,294,088
Number of Sequences: 539616
Number of extensions: 3475726
Number of successful extensions: 22105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 616
Number of HSP's that attempted gapping in prelim test: 18396
Number of HSP's gapped (non-prelim): 3394
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)