Query 026781
Match_columns 233
No_of_seqs 123 out of 1227
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 12:36:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026781.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026781hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0868 Glutathione S-transfer 100.0 1.6E-40 3.5E-45 237.4 18.5 211 20-233 3-214 (217)
2 TIGR01262 maiA maleylacetoacet 100.0 2.1E-38 4.6E-43 245.9 22.6 207 24-232 1-210 (210)
3 PRK09481 sspA stringent starva 100.0 1.4E-38 3E-43 246.8 19.5 197 22-232 10-208 (211)
4 PRK15113 glutathione S-transfe 100.0 2.1E-37 4.7E-42 240.7 19.1 206 18-229 1-211 (214)
5 PRK13972 GSH-dependent disulfi 100.0 2.1E-37 4.6E-42 241.0 17.0 202 23-231 2-210 (215)
6 PLN02473 glutathione S-transfe 100.0 9.1E-37 2E-41 237.3 20.4 203 22-227 2-212 (214)
7 PLN02395 glutathione S-transfe 100.0 5.9E-35 1.3E-39 227.3 21.6 203 22-228 2-212 (215)
8 PRK10542 glutathionine S-trans 100.0 1.4E-35 3.1E-40 228.4 17.8 196 23-228 1-199 (201)
9 PRK11752 putative S-transferas 100.0 4.3E-34 9.4E-39 228.2 22.5 203 19-228 41-260 (264)
10 COG0625 Gst Glutathione S-tran 100.0 3.1E-34 6.8E-39 222.6 20.8 194 23-221 1-199 (211)
11 PRK10357 putative glutathione 100.0 3.1E-34 6.6E-39 221.2 20.2 197 23-227 1-201 (202)
12 KOG0406 Glutathione S-transfer 100.0 1.9E-33 4E-38 213.7 20.3 196 21-227 8-212 (231)
13 PTZ00057 glutathione s-transfe 100.0 3.1E-33 6.7E-38 215.9 20.5 192 21-229 3-202 (205)
14 KOG0867 Glutathione S-transfer 100.0 6.5E-32 1.4E-36 210.6 17.2 201 22-225 2-208 (226)
15 TIGR00862 O-ClC intracellular 100.0 1.7E-30 3.7E-35 202.3 19.8 182 28-228 16-222 (236)
16 PLN02378 glutathione S-transfe 100.0 6.8E-31 1.5E-35 203.9 17.0 180 28-228 17-201 (213)
17 KOG1695 Glutathione S-transfer 100.0 3.6E-29 7.8E-34 189.2 18.6 201 20-229 1-203 (206)
18 PLN02817 glutathione dehydroge 100.0 4.7E-29 1E-33 198.3 18.8 176 29-226 71-251 (265)
19 PRK10387 glutaredoxin 2; Provi 100.0 1.2E-29 2.6E-34 196.7 14.4 186 23-221 1-208 (210)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 3.2E-27 7E-32 182.7 13.1 184 24-221 1-207 (209)
21 KOG4420 Uncharacterized conser 99.9 6.6E-26 1.4E-30 171.7 16.4 204 23-227 27-288 (325)
22 PLN02907 glutamate-tRNA ligase 99.9 8E-23 1.7E-27 181.1 17.8 154 23-219 3-159 (722)
23 KOG1422 Intracellular Cl- chan 99.9 5.2E-21 1.1E-25 141.3 15.9 183 29-228 19-207 (221)
24 cd03052 GST_N_GDAP1 GST_N fami 99.8 9.8E-20 2.1E-24 116.9 8.0 73 23-95 1-73 (73)
25 cd03045 GST_N_Delta_Epsilon GS 99.8 7.6E-19 1.6E-23 113.4 8.4 74 23-96 1-74 (74)
26 PF13417 GST_N_3: Glutathione 99.8 7.9E-19 1.7E-23 113.5 8.3 74 25-101 1-74 (75)
27 cd03050 GST_N_Theta GST_N fami 99.8 1.6E-18 3.4E-23 112.5 8.9 76 23-98 1-76 (76)
28 cd03053 GST_N_Phi GST_N family 99.8 1.8E-18 3.8E-23 112.3 8.7 75 23-97 2-76 (76)
29 cd03048 GST_N_Ure2p_like GST_N 99.8 2.5E-18 5.5E-23 112.9 9.1 77 22-99 1-80 (81)
30 cd03059 GST_N_SspA GST_N famil 99.8 5.6E-18 1.2E-22 109.0 8.5 73 23-98 1-73 (73)
31 cd03056 GST_N_4 GST_N family, 99.8 4.6E-18 1E-22 109.3 8.1 73 23-95 1-73 (73)
32 cd03047 GST_N_2 GST_N family, 99.8 5.6E-18 1.2E-22 109.0 8.1 73 23-95 1-73 (73)
33 cd03058 GST_N_Tau GST_N family 99.8 7.6E-18 1.6E-22 108.7 8.6 73 23-98 1-74 (74)
34 cd03041 GST_N_2GST_N GST_N fam 99.7 4.6E-18 1E-22 110.5 7.0 75 22-98 1-77 (77)
35 cd03191 GST_C_Zeta GST_C famil 99.7 5.6E-17 1.2E-21 114.7 13.0 118 110-228 2-121 (121)
36 cd03046 GST_N_GTT1_like GST_N 99.7 1.3E-17 2.9E-22 108.1 9.0 76 23-99 1-76 (76)
37 cd03051 GST_N_GTT2_like GST_N 99.7 8.7E-18 1.9E-22 108.3 7.9 73 23-95 1-74 (74)
38 cd03042 GST_N_Zeta GST_N famil 99.7 9.9E-18 2.2E-22 107.8 8.0 73 23-95 1-73 (73)
39 cd03057 GST_N_Beta GST_N famil 99.7 1.6E-17 3.5E-22 108.0 8.8 76 23-99 1-77 (77)
40 PF02798 GST_N: Glutathione S- 99.7 1.6E-17 3.6E-22 107.5 8.7 74 23-96 1-76 (76)
41 cd03061 GST_N_CLIC GST_N famil 99.7 1.6E-17 3.4E-22 109.8 8.4 69 29-100 20-88 (91)
42 cd03076 GST_N_Pi GST_N family, 99.7 9.1E-18 2E-22 107.9 7.2 73 22-97 1-73 (73)
43 cd03044 GST_N_EF1Bgamma GST_N 99.7 1.9E-17 4.1E-22 107.1 7.8 72 24-96 2-74 (75)
44 cd03060 GST_N_Omega_like GST_N 99.7 3.7E-17 8.1E-22 104.5 7.9 69 23-94 1-70 (71)
45 cd03075 GST_N_Mu GST_N family, 99.7 4E-17 8.7E-22 107.2 8.3 76 23-98 1-82 (82)
46 cd03039 GST_N_Sigma_like GST_N 99.7 2.1E-17 4.6E-22 106.0 6.7 72 23-96 1-72 (72)
47 KOG4244 Failed axon connection 99.7 6E-16 1.3E-20 118.6 12.6 179 21-216 44-272 (281)
48 cd03196 GST_C_5 GST_C family, 99.7 2.8E-16 6.2E-21 110.0 9.6 110 108-224 3-115 (115)
49 cd03038 GST_N_etherase_LigE GS 99.7 1.7E-16 3.7E-21 104.9 8.0 70 29-99 14-84 (84)
50 cd03055 GST_N_Omega GST_N fami 99.7 2.6E-16 5.6E-21 105.1 8.4 74 19-95 15-89 (89)
51 cd03077 GST_N_Alpha GST_N fami 99.7 3.1E-16 6.7E-21 102.3 8.3 72 22-99 1-77 (79)
52 cd03049 GST_N_3 GST_N family, 99.7 1.8E-16 4E-21 101.9 7.1 70 23-95 1-73 (73)
53 cd03188 GST_C_Beta GST_C famil 99.7 3E-16 6.5E-21 109.7 8.7 111 111-224 2-114 (114)
54 cd03037 GST_N_GRX2 GST_N famil 99.7 2E-16 4.4E-21 101.1 7.1 70 23-96 1-71 (71)
55 cd03178 GST_C_Ure2p_like GST_C 99.7 6.3E-16 1.4E-20 108.0 9.7 110 111-224 1-112 (113)
56 cd03080 GST_N_Metaxin_like GST 99.7 5.3E-16 1.2E-20 100.2 8.2 67 23-99 2-75 (75)
57 PF13409 GST_N_2: Glutathione 99.7 4.1E-16 8.9E-21 99.2 7.1 68 30-97 1-70 (70)
58 cd03186 GST_C_SspA GST_N famil 99.7 1.7E-15 3.6E-20 104.8 10.5 105 110-224 2-107 (107)
59 cd03177 GST_C_Delta_Epsilon GS 99.6 7.7E-16 1.7E-20 108.4 8.5 112 111-228 2-114 (118)
60 cd03180 GST_C_2 GST_C family, 99.6 4.7E-15 1E-19 102.9 11.3 107 111-220 2-110 (110)
61 cd03040 GST_N_mPGES2 GST_N fam 99.6 1.2E-15 2.5E-20 99.2 7.7 72 22-98 1-76 (77)
62 COG2999 GrxB Glutaredoxin 2 [P 99.6 2.8E-15 6.1E-20 108.0 10.0 186 23-221 1-208 (215)
63 cd03189 GST_C_GTT1_like GST_C 99.6 4.1E-15 9E-20 104.8 10.9 110 105-218 2-119 (119)
64 KOG3029 Glutathione S-transfer 99.6 4.2E-15 9E-20 114.6 11.4 189 21-216 89-354 (370)
65 cd03187 GST_C_Phi GST_C family 99.6 2.9E-15 6.3E-20 105.3 9.7 111 111-224 2-118 (118)
66 cd03181 GST_C_EFB1gamma GST_C 99.6 5.3E-15 1.2E-19 104.8 11.1 115 111-228 1-118 (123)
67 cd03043 GST_N_1 GST_N family, 99.6 2E-15 4.3E-20 96.9 7.4 68 27-95 6-73 (73)
68 cd03184 GST_C_Omega GST_C fami 99.6 4E-15 8.7E-20 105.7 9.6 108 111-228 2-115 (124)
69 cd03182 GST_C_GTT2_like GST_C 99.6 6.5E-15 1.4E-19 103.4 10.3 110 108-220 1-117 (117)
70 cd03208 GST_C_Alpha GST_C fami 99.6 6.6E-15 1.4E-19 106.2 10.4 116 110-229 2-118 (137)
71 COG0435 ECM4 Predicted glutath 99.6 8.8E-15 1.9E-19 112.7 11.5 195 18-224 47-284 (324)
72 cd03185 GST_C_Tau GST_C family 99.6 6.4E-15 1.4E-19 104.8 10.1 110 110-228 2-117 (126)
73 cd03190 GST_C_ECM4_like GST_C 99.6 1.4E-14 3E-19 105.3 10.8 109 110-226 3-118 (142)
74 cd03210 GST_C_Pi GST_C family, 99.6 1.3E-14 2.8E-19 103.3 10.2 111 110-228 2-114 (126)
75 cd00570 GST_N_family Glutathio 99.6 9.9E-15 2.2E-19 92.5 7.7 71 23-95 1-71 (71)
76 cd03209 GST_C_Mu GST_C family, 99.6 1.5E-14 3.2E-19 102.3 9.4 110 111-229 2-112 (121)
77 KOG2903 Predicted glutathione 99.6 2.3E-14 5E-19 109.4 10.4 197 19-224 34-286 (319)
78 cd03183 GST_C_Theta GST_C fami 99.6 3.3E-14 7.2E-19 101.2 9.4 111 112-224 2-120 (126)
79 KOG3027 Mitochondrial outer me 99.6 3E-13 6.6E-18 99.9 14.4 174 30-217 33-248 (257)
80 cd03198 GST_C_CLIC GST_C famil 99.5 3.9E-14 8.4E-19 100.7 9.4 83 144-227 23-125 (134)
81 cd03195 GST_C_4 GST_C family, 99.5 2.1E-14 4.5E-19 100.4 7.5 111 110-226 2-113 (114)
82 cd03207 GST_C_8 GST_C family, 99.5 2.2E-14 4.7E-19 98.5 6.5 100 117-226 3-102 (103)
83 cd03054 GST_N_Metaxin GST_N fa 99.5 5.1E-14 1.1E-18 90.1 7.7 64 24-97 2-72 (72)
84 cd03206 GST_C_7 GST_C family, 99.5 1.1E-13 2.4E-18 94.4 7.7 99 116-220 2-100 (100)
85 cd03200 GST_C_JTV1 GST_C famil 99.5 1.9E-13 4.2E-18 92.4 8.1 96 91-217 1-96 (96)
86 PF00043 GST_C: Glutathione S- 99.5 2.5E-13 5.5E-18 91.7 8.6 72 144-218 22-95 (95)
87 cd03203 GST_C_Lambda GST_C fam 99.5 1.1E-12 2.4E-17 92.5 10.8 106 108-227 1-112 (120)
88 cd03179 GST_C_1 GST_C family, 99.4 1.8E-13 3.9E-18 94.1 5.5 102 111-215 2-105 (105)
89 cd03204 GST_C_GDAP1 GST_C fami 99.4 7.5E-13 1.6E-17 91.2 8.3 76 144-220 23-111 (111)
90 cd03194 GST_C_3 GST_C family, 99.4 4.6E-13 1E-17 93.5 7.3 75 147-225 38-113 (114)
91 cd03201 GST_C_DHAR GST_C famil 99.4 2.2E-12 4.7E-17 91.0 9.2 78 149-227 29-111 (121)
92 PF13410 GST_C_2: Glutathione 99.3 4.7E-12 1E-16 80.2 7.3 65 146-213 2-69 (69)
93 KOG3028 Translocase of outer m 99.3 2.8E-10 6.1E-15 89.8 18.7 174 30-216 16-233 (313)
94 PF14497 GST_C_3: Glutathione 99.3 6.5E-13 1.4E-17 90.5 3.4 97 108-216 2-99 (99)
95 cd03192 GST_C_Sigma_like GST_C 99.3 1.5E-11 3.2E-16 84.4 8.8 101 111-214 2-104 (104)
96 cd03079 GST_N_Metaxin2 GST_N f 99.3 9.3E-12 2E-16 79.1 7.1 60 29-97 15-74 (74)
97 cd00299 GST_C_family Glutathio 99.3 6.6E-12 1.4E-16 85.2 6.4 96 116-214 2-100 (100)
98 cd03202 GST_C_etherase_LigE GS 99.2 8.3E-11 1.8E-15 83.4 7.2 68 148-217 56-124 (124)
99 cd03205 GST_C_6 GST_C family, 99.1 3.7E-10 8.1E-15 76.6 8.3 93 117-214 3-98 (98)
100 cd03193 GST_C_Metaxin GST_C fa 99.1 2.7E-10 5.9E-15 75.7 7.4 65 148-215 17-88 (88)
101 TIGR02190 GlrX-dom Glutaredoxi 99.1 8.1E-10 1.8E-14 71.8 6.9 73 20-95 7-79 (79)
102 cd03211 GST_C_Metaxin2 GST_C f 99.0 6.8E-10 1.5E-14 78.8 6.6 68 146-215 53-126 (126)
103 cd03078 GST_N_Metaxin1_like GS 99.0 1.6E-09 3.4E-14 69.2 7.5 59 29-97 14-72 (73)
104 PF14834 GST_C_4: Glutathione 99.0 3.2E-09 7E-14 71.8 8.5 113 108-225 1-113 (117)
105 cd03197 GST_C_mPGES2 GST_C fam 99.0 2.3E-09 5E-14 77.1 7.0 64 151-216 80-145 (149)
106 PRK10638 glutaredoxin 3; Provi 99.0 2.4E-09 5.2E-14 70.3 6.3 73 21-95 2-74 (83)
107 cd03212 GST_C_Metaxin1_3 GST_C 98.9 2.4E-09 5.2E-14 77.1 6.5 67 147-216 61-134 (137)
108 cd03029 GRX_hybridPRX5 Glutare 98.8 1.5E-08 3.3E-13 64.6 7.1 71 22-95 2-72 (72)
109 cd03027 GRX_DEP Glutaredoxin ( 98.7 7.7E-08 1.7E-12 61.5 5.7 69 22-92 2-70 (73)
110 TIGR02196 GlrX_YruB Glutaredox 98.6 1.7E-07 3.7E-12 59.6 5.8 71 22-94 1-73 (74)
111 cd02066 GRX_family Glutaredoxi 98.5 2.9E-07 6.2E-12 58.1 5.8 70 22-93 1-70 (72)
112 PRK10329 glutaredoxin-like pro 98.5 3.9E-07 8.4E-12 59.3 5.6 61 22-85 2-62 (81)
113 cd02976 NrdH NrdH-redoxin (Nrd 98.5 3.3E-07 7.1E-12 58.1 4.9 64 22-87 1-64 (73)
114 cd03418 GRX_GRXb_1_3_like Glut 98.4 8.8E-07 1.9E-11 56.7 5.7 71 22-94 1-72 (75)
115 COG0695 GrxC Glutaredoxin and 98.3 1.6E-06 3.5E-11 56.3 6.0 71 22-92 2-72 (80)
116 TIGR02200 GlrX_actino Glutared 98.3 1.4E-06 3.1E-11 55.9 4.6 71 22-94 1-75 (77)
117 TIGR02189 GlrX-like_plant Glut 98.3 3.6E-06 7.8E-11 57.0 6.4 76 18-93 5-81 (99)
118 TIGR02181 GRX_bact Glutaredoxi 98.3 3.4E-06 7.4E-11 54.6 6.0 72 23-96 1-72 (79)
119 PRK11200 grxA glutaredoxin 1; 98.2 5.7E-06 1.2E-10 54.4 6.8 76 22-99 2-84 (85)
120 cd03419 GRX_GRXh_1_2_like Glut 98.2 9.4E-06 2E-10 52.8 6.8 75 22-96 1-76 (82)
121 PF10568 Tom37: Outer mitochon 98.1 1.3E-05 2.8E-10 50.7 6.7 55 30-94 13-71 (72)
122 PHA03050 glutaredoxin; Provisi 98.1 1.2E-05 2.7E-10 55.2 6.4 74 19-92 11-88 (108)
123 TIGR02194 GlrX_NrdH Glutaredox 98.1 7.2E-06 1.6E-10 52.1 4.9 57 23-82 1-57 (72)
124 TIGR02183 GRXA Glutaredoxin, G 98.1 2.4E-05 5.3E-10 51.5 7.3 75 23-99 2-83 (86)
125 PF00462 Glutaredoxin: Glutare 98.0 5.3E-06 1.1E-10 50.7 3.0 60 23-84 1-60 (60)
126 TIGR00365 monothiol glutaredox 97.9 6.2E-05 1.3E-09 50.7 6.4 75 18-94 9-88 (97)
127 cd03028 GRX_PICOT_like Glutare 97.8 8.5E-05 1.8E-09 49.3 6.2 75 18-94 5-84 (90)
128 TIGR02180 GRX_euk Glutaredoxin 97.7 0.00013 2.8E-09 47.5 6.4 74 23-96 1-77 (84)
129 cd03199 GST_C_GRX2 GST_C famil 97.7 8.4E-05 1.8E-09 52.2 5.1 67 149-220 59-125 (128)
130 PF04399 Glutaredoxin2_C: Glut 97.6 0.00017 3.7E-09 51.1 5.7 68 148-220 57-124 (132)
131 KOG1147 Glutamyl-tRNA syntheta 97.4 8.3E-05 1.8E-09 63.4 2.0 121 75-224 39-162 (712)
132 cd03031 GRX_GRX_like Glutaredo 97.2 0.0011 2.5E-08 48.0 6.0 70 22-93 1-80 (147)
133 KOG1752 Glutaredoxin and relat 97.1 0.0029 6.2E-08 43.0 6.4 79 17-95 10-89 (104)
134 PRK12759 bifunctional gluaredo 97.0 0.002 4.4E-08 54.9 6.9 70 20-92 1-79 (410)
135 PRK10824 glutaredoxin-4; Provi 97.0 0.0036 7.8E-08 43.4 6.3 73 19-93 13-90 (115)
136 cd02973 TRX_GRX_like Thioredox 96.4 0.013 2.9E-07 36.1 5.7 58 22-85 2-64 (67)
137 COG4545 Glutaredoxin-related p 96.3 0.013 2.9E-07 36.6 4.9 66 20-85 1-77 (85)
138 PTZ00062 glutaredoxin; Provisi 96.3 0.015 3.2E-07 44.7 6.2 73 18-92 110-187 (204)
139 cd03036 ArsC_like Arsenate Red 96.0 0.01 2.2E-07 41.0 3.7 32 23-54 1-32 (111)
140 PRK01655 spxA transcriptional 95.9 0.012 2.7E-07 41.9 4.1 32 23-54 2-33 (131)
141 cd03032 ArsC_Spx Arsenate Redu 95.9 0.014 3E-07 40.6 4.1 32 23-54 2-33 (115)
142 cd02977 ArsC_family Arsenate R 95.8 0.015 3.2E-07 39.7 4.0 32 23-54 1-32 (105)
143 PRK10026 arsenate reductase; P 95.6 0.023 5E-07 40.9 4.4 34 21-54 2-35 (141)
144 cd03030 GRX_SH3BGR Glutaredoxi 95.6 0.057 1.2E-06 35.9 5.9 68 23-92 2-79 (92)
145 PRK12559 transcriptional regul 95.4 0.031 6.7E-07 39.8 4.3 32 23-54 2-33 (131)
146 cd03033 ArsC_15kD Arsenate Red 95.4 0.028 6E-07 38.9 4.0 33 22-54 1-33 (113)
147 COG1393 ArsC Arsenate reductas 95.3 0.033 7.1E-07 38.8 4.3 33 22-54 2-34 (117)
148 PRK13344 spxA transcriptional 95.3 0.028 6.1E-07 40.0 4.0 32 23-54 2-33 (132)
149 cd03035 ArsC_Yffb Arsenate Red 95.1 0.035 7.6E-07 37.9 3.9 32 23-54 1-32 (105)
150 COG0278 Glutaredoxin-related p 95.1 0.12 2.7E-06 34.4 6.2 75 19-95 13-93 (105)
151 TIGR01617 arsC_related transcr 95.1 0.034 7.5E-07 38.7 3.8 32 23-54 1-32 (117)
152 PRK10853 putative reductase; P 94.3 0.067 1.5E-06 37.3 3.8 32 23-54 2-33 (118)
153 TIGR01616 nitro_assoc nitrogen 94.1 0.098 2.1E-06 36.9 4.2 33 22-54 2-34 (126)
154 PF05768 DUF836: Glutaredoxin- 93.9 0.39 8.4E-06 30.9 6.6 55 22-81 1-57 (81)
155 PF11287 DUF3088: Protein of u 93.8 0.23 5E-06 33.9 5.4 66 31-99 24-108 (112)
156 TIGR00014 arsC arsenate reduct 93.0 0.16 3.5E-06 35.2 3.9 32 23-54 1-32 (114)
157 cd03034 ArsC_ArsC Arsenate Red 92.9 0.17 3.8E-06 34.9 3.9 32 23-54 1-32 (112)
158 TIGR00411 redox_disulf_1 small 92.7 1.6 3.5E-05 27.5 8.2 57 22-82 2-62 (82)
159 TIGR00412 redox_disulf_2 small 92.6 0.82 1.8E-05 28.9 6.5 55 22-84 2-60 (76)
160 PF11801 Tom37_C: Tom37 C-term 90.9 0.63 1.4E-05 34.6 5.1 38 154-193 112-153 (168)
161 cd03026 AhpF_NTD_C TRX-GRX-lik 90.7 1 2.2E-05 29.6 5.5 58 22-85 15-77 (89)
162 PHA02125 thioredoxin-like prot 90.4 1.1 2.4E-05 28.2 5.4 51 23-79 2-52 (75)
163 cd01659 TRX_superfamily Thiore 87.0 1.8 3.8E-05 24.9 4.5 53 23-78 1-58 (69)
164 PF04908 SH3BGR: SH3-binding, 84.3 2 4.3E-05 28.9 3.9 69 22-92 2-85 (99)
165 PF03960 ArsC: ArsC family; I 80.5 2.1 4.5E-05 29.3 3.0 29 26-54 1-29 (110)
166 PF09635 MetRS-N: MetRS-N bind 80.3 1.4 3E-05 30.6 2.0 26 74-99 36-63 (122)
167 PF13192 Thioredoxin_3: Thiore 74.7 16 0.00034 22.9 5.7 56 22-85 2-61 (76)
168 KOG1668 Elongation factor 1 be 71.8 2.6 5.7E-05 32.7 1.7 60 156-222 10-69 (231)
169 cd02953 DsbDgamma DsbD gamma f 70.7 13 0.00028 24.6 4.9 57 21-78 13-77 (104)
170 KOG0911 Glutaredoxin-related p 68.7 9.8 0.00021 29.6 4.2 74 20-95 138-216 (227)
171 cd02949 TRX_NTR TRX domain, no 64.5 30 0.00064 22.6 5.6 59 22-84 16-80 (97)
172 cd02947 TRX_family TRX family; 60.0 39 0.00084 20.9 6.1 56 21-82 12-74 (93)
173 TIGR03140 AhpF alkyl hydropero 56.5 13 0.00027 33.1 3.3 74 22-96 120-197 (515)
174 PRK15317 alkyl hydroperoxide r 56.5 14 0.00031 32.7 3.7 72 22-97 119-197 (517)
175 TIGR02681 phage_pRha phage reg 54.8 12 0.00027 25.5 2.4 26 74-99 2-28 (108)
176 cd02989 Phd_like_TxnDC9 Phosdu 53.5 62 0.0013 22.0 5.8 60 22-85 25-89 (113)
177 PF10022 DUF2264: Uncharacteri 52.4 42 0.00091 28.4 5.6 134 74-216 98-238 (361)
178 cd02975 PfPDO_like_N Pyrococcu 52.1 36 0.00078 23.2 4.4 52 23-78 25-80 (113)
179 COG3011 Predicted thiol-disulf 47.9 1E+02 0.0022 22.1 7.1 79 18-98 5-87 (137)
180 TIGR03143 AhpF_homolog putativ 45.7 56 0.0012 29.4 5.7 57 22-84 479-540 (555)
181 PHA03075 glutaredoxin-like pro 44.1 51 0.0011 22.9 3.9 67 21-98 3-70 (123)
182 TIGR02187 GlrX_arch Glutaredox 44.1 88 0.0019 24.0 6.0 53 22-78 136-191 (215)
183 KOG2824 Glutaredoxin-related p 43.8 47 0.001 26.8 4.3 74 18-93 128-211 (281)
184 TIGR01295 PedC_BrcD bacterioci 42.1 1.2E+02 0.0025 21.1 6.7 21 23-43 27-47 (122)
185 cd04911 ACT_AKiii-YclM-BS_1 AC 41.2 29 0.00063 22.1 2.3 23 31-53 15-37 (76)
186 cd02978 KaiB_like KaiB-like fa 41.2 70 0.0015 20.1 4.0 53 22-78 3-60 (72)
187 cd02963 TRX_DnaJ TRX domain, D 39.0 1.2E+02 0.0026 20.4 6.2 59 21-83 26-91 (111)
188 COG3019 Predicted metal-bindin 38.6 57 0.0012 23.5 3.7 76 18-99 23-105 (149)
189 PTZ00051 thioredoxin; Provisio 38.0 1.1E+02 0.0024 19.6 5.5 57 23-83 22-83 (98)
190 PF04564 U-box: U-box domain; 37.4 84 0.0018 19.5 4.1 25 73-98 15-39 (73)
191 PF00085 Thioredoxin: Thioredo 36.4 1.2E+02 0.0025 19.5 8.8 73 20-96 18-102 (103)
192 cd02956 ybbN ybbN protein fami 35.4 79 0.0017 20.3 4.0 58 22-83 15-78 (96)
193 cd02984 TRX_PICOT TRX domain, 34.8 1.2E+02 0.0027 19.3 5.2 58 22-83 17-80 (97)
194 COG2761 FrnE Predicted dithiol 33.3 1.1E+02 0.0024 24.0 4.9 29 20-48 5-37 (225)
195 COG3917 NahD 2-hydroxychromene 33.3 2.2E+02 0.0047 21.6 12.7 91 19-119 6-104 (203)
196 cd02948 TRX_NDPK TRX domain, T 30.7 70 0.0015 21.1 3.1 57 22-83 20-83 (102)
197 cd02997 PDI_a_PDIR PDIa family 29.0 1.3E+02 0.0028 19.4 4.3 56 21-78 19-80 (104)
198 PF04659 Arch_fla_DE: Archaeal 28.9 1.8E+02 0.004 19.5 4.8 37 104-141 11-47 (99)
199 cd02957 Phd_like Phosducin (Ph 28.6 1E+02 0.0022 20.7 3.7 60 22-86 27-91 (113)
200 KOG0190 Protein disulfide isom 27.2 3.9E+02 0.0084 23.8 7.6 74 23-100 46-134 (493)
201 PF09413 DUF2007: Domain of un 26.5 81 0.0018 18.9 2.6 31 24-54 2-32 (67)
202 PRK15371 effector protein YopJ 25.2 2.1E+02 0.0046 23.4 5.3 64 150-216 23-88 (287)
203 PF04134 DUF393: Protein of un 24.9 2.2E+02 0.0047 19.0 4.9 70 26-96 2-76 (114)
204 cd02999 PDI_a_ERp44_like PDIa 24.7 1.1E+02 0.0023 20.2 3.1 54 22-78 21-77 (100)
205 cd03021 DsbA_GSTK DsbA family, 24.7 1.5E+02 0.0032 22.6 4.3 35 21-55 1-39 (209)
206 PRK10996 thioredoxin 2; Provis 24.7 1.5E+02 0.0032 21.0 4.1 59 22-84 55-119 (139)
207 PTZ00443 Thioredoxin domain-co 24.1 3.5E+02 0.0077 21.1 6.8 74 21-98 54-139 (224)
208 PHA02278 thioredoxin-like prot 23.7 2.3E+02 0.005 18.9 7.0 62 23-84 18-85 (103)
209 PF01323 DSBA: DSBA-like thior 23.6 1.5E+02 0.0033 21.8 4.2 35 22-56 1-40 (193)
210 TIGR02187 GlrX_arch Glutaredox 21.7 2.4E+02 0.0052 21.6 5.0 60 21-82 21-88 (215)
211 PRK09266 hypothetical protein; 21.5 81 0.0018 25.2 2.4 60 40-99 200-259 (266)
212 TIGR01764 excise DNA binding d 21.3 1.5E+02 0.0033 15.9 3.0 25 71-95 24-48 (49)
213 PRK09301 circadian clock prote 20.4 2.8E+02 0.0061 18.8 4.4 55 20-78 6-65 (103)
No 1
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-40 Score=237.42 Aligned_cols=211 Identities=47% Similarity=0.802 Sum_probs=196.9
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCC-CCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhC
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKG-EQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~-~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~ 98 (233)
+.+++||++..|.+++|||++|.++|++|+.+.+++..+ ...+.+|.++||.++||+|+.||..++||.||++||++.+
T Consensus 3 ~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~ 82 (217)
T KOG0868|consen 3 AAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETY 82 (217)
T ss_pred cccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcC
Confidence 457899999999999999999999999999999999765 5677899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCC
Q 026781 99 PQRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGED 178 (233)
Q Consensus 99 ~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 178 (233)
|+++|+|+ |+..|+.++++...+.+.+.+..+..+...+..+..... ..++...+.+.+..||+.|....++|.+||+
T Consensus 83 P~ppLLP~-d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~-~~W~q~~ItkGF~ALEklL~~~aGkycvGDe 160 (217)
T KOG0868|consen 83 PDPPLLPK-DPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG-DQWAQHFITKGFTALEKLLKSHAGKYCVGDE 160 (217)
T ss_pred CCCCCCCc-CHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh-hHHHHHHHHHhHHHHHHHHHHccCCcccCce
Confidence 99999999 999999999999999999999998888888766654444 6888999999999999999988789999999
Q ss_pred ccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCCCCCC
Q 026781 179 VYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQPDAAR 233 (233)
Q Consensus 179 ~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 233 (233)
+|+||+++.+.+... .++..+++.||.+.+..+.+.+.|+|+.++++.||++|.
T Consensus 161 vtiADl~L~pqv~nA-~rf~vdl~PYPti~ri~e~l~elpaFq~ahP~nQPD~P~ 214 (217)
T KOG0868|consen 161 VTIADLCLPPQVYNA-NRFHVDLTPYPTITRINEELAELPAFQAAHPDNQPDTPP 214 (217)
T ss_pred eehhhhccchhhhhh-hhccccCCcCchHHHHHHHHHhCHHHHhcCCCCCCCCCC
Confidence 999999999999999 899999999999999999999999999999999999983
No 2
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=2.1e-38 Score=245.85 Aligned_cols=207 Identities=46% Similarity=0.768 Sum_probs=173.1
Q ss_pred EEeeeCCChhhHHHHHHHHHcCCCceEEEeecCC-CCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCCC
Q 026781 24 VLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSK-GEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRA 102 (233)
Q Consensus 24 ~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~-~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~~ 102 (233)
+||++..||++++++++|+++|++|+.+.++... ++...+++.++||+|++|+|+++|..|+||.+|++||+++++...
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~ 80 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPP 80 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCC
Confidence 4898899999999999999999999999998733 345678899999999999999999999999999999999998777
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCcc
Q 026781 103 LLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDK--FGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVY 180 (233)
Q Consensus 103 l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t 180 (233)
|+|. +..+++++++|+.++...+.+............. ...+...+...+.+.+.|+.||++|++++++|++|+++|
T Consensus 81 l~p~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 159 (210)
T TIGR01262 81 LLPA-DPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPT 159 (210)
T ss_pred CCCC-CHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCC
Confidence 9998 9999999999999887666543222222222111 112223455667799999999999987546799999999
Q ss_pred HhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCCCCC
Q 026781 181 MADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQPDAA 232 (233)
Q Consensus 181 ~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 232 (233)
+|||++++++.+. ...+.+++.||+|++|++++.+||++++++...+|++|
T Consensus 160 ~ADi~~~~~l~~~-~~~~~~~~~~p~l~~~~~~~~~rp~~~~~~~~~~~~~~ 210 (210)
T TIGR01262 160 LADLCLVPQVYNA-ERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210 (210)
T ss_pred HHHHHHHHHHHHH-HHcCCCcccchHHHHHHHHHhcCHHHHHhCcccCCCCC
Confidence 9999999999887 56666678999999999999999999999999998887
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=1.4e-38 Score=246.85 Aligned_cols=197 Identities=24% Similarity=0.337 Sum_probs=167.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCC
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
+|+||+++.||++++++++|+++|++|+.+.++.. .+.++|+++||.|+||+|+++|..|+||.+|++||++++++.
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~ 86 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD---NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHP 86 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc---cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999999864 567899999999999999999999999999999999999877
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccH
Q 026781 102 ALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYM 181 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ 181 (233)
.|+|. ++.+++++++|+.++...+..... .. . ...+...+...+.+.+.+..||++|++ ++|++|+++|+
T Consensus 87 ~l~p~-~~~~ra~~~~~~~~~~~~~~~~~~----~~-~--~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~ 156 (211)
T PRK09481 87 PLMPV-YPVARGESRLMMHRIEKDWYSLMN----KI-V--NGSASEADAARKQLREELLAIAPVFGE--KPYFMSEEFSL 156 (211)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHHHHHHHH----HH-h--cCCHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCccH
Confidence 79999 999999999999877654432211 11 1 123344567778899999999999987 79999999999
Q ss_pred hHHhhhhHHHHHHHHhCCCC--CCCchHHHHHHHhhCChhhhhhCCCCCCCCC
Q 026781 182 ADVFLAPQIAVVTMRFNIDM--SKFPTLLRIYESYKGLPEFLASSPERQPDAA 232 (233)
Q Consensus 182 ADi~~~~~l~~~~~~~~~~~--~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 232 (233)
|||++++.+.++ ...+.++ ..||+|++|++++.+||++++++....+.++
T Consensus 157 AD~~l~~~~~~~-~~~~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~~~~ 208 (211)
T PRK09481 157 VDCYLAPLLWRL-PVLGIELSGPGAKELKGYMTRVFERDSFLASLTEAEREMR 208 (211)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHHHHh
Confidence 999999999877 5556554 5799999999999999999999987765543
No 4
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=2.1e-37 Score=240.71 Aligned_cols=206 Identities=26% Similarity=0.235 Sum_probs=167.5
Q ss_pred CCCCceEEeeeC--CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 18 SSSSKLVLYSYW--QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 18 ~~~~~~~Ly~~~--~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
|+.++++||+.+ .|+++++++++|+++|++|+.+.+++..++...++|+++||.|+||+|++||..|+||.+|++||+
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~ 80 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLE 80 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHH
Confidence 455679999865 699999999999999999999999998887888999999999999999999999999999999999
Q ss_pred hhCCCCC---CCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026781 96 EKYPQRA---LLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAK 172 (233)
Q Consensus 96 ~~~~~~~---l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 172 (233)
+++++.. ++|. ++.+++++++|+.+....+...........+......+...+...+.+.+.++.||++|+. +++
T Consensus 81 ~~~~~~~~~~l~p~-~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~ 158 (214)
T PRK15113 81 ERFAPPAWERIYPA-DLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAP-GQP 158 (214)
T ss_pred HHcCCCCccccCCC-CHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 9998655 9999 9999999999999987655442211100001111112333466777899999999999985 247
Q ss_pred eeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCC
Q 026781 173 YATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQP 229 (233)
Q Consensus 173 ~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 229 (233)
|++|+ +|+|||++++.+.++ ...+..+. |+|.+|++|+.+||+|++++++...
T Consensus 159 ~l~G~-~TlADi~l~~~l~~~-~~~~~~~~--p~l~~~~~r~~~rp~~~~~~~~~~~ 211 (214)
T PRK15113 159 NLFGE-WCIADTDLALMLNRL-VLHGDEVP--ERLADYATFQWQRASVQRWLALSAK 211 (214)
T ss_pred EeeCC-ccHHHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHhcCHHHHHHHHHhhh
Confidence 99996 999999999999887 55555443 9999999999999999999876543
No 5
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=2.1e-37 Score=240.98 Aligned_cols=202 Identities=25% Similarity=0.299 Sum_probs=164.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe-----CC--eeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD-----GD--VVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~-----~g--~~l~es~~I~~yL~ 95 (233)
++||+.+ ++++++|+++|+++|++|+.+.+++..++.+.++|+++||.|+||+|++ || .+|+||.+|++||+
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~ 80 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA 80 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHH
Confidence 7899755 8999999999999999999999998877778899999999999999996 45 47999999999999
Q ss_pred hhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceee
Q 026781 96 EKYPQRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYAT 175 (233)
Q Consensus 96 ~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~ 175 (233)
++++ .+.|. ++.+++++++|+.+..+.+.+.+..............+...+...+.+.+.+..||++|.+ ++|++
T Consensus 81 ~~~~--~l~p~-~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~ 155 (215)
T PRK13972 81 EKTG--LFLSH-ETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLEN--SPWLG 155 (215)
T ss_pred HhcC--CCCCC-CHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhcc--Ccccc
Confidence 9985 37788 8999999999999988877664321100000011112344566777899999999999987 79999
Q ss_pred cCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCCCC
Q 026781 176 GEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQPDA 231 (233)
Q Consensus 176 G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~ 231 (233)
|+++|+|||++++.+... ...+.++..||+|.+|++++.+||++++++.+.+.+.
T Consensus 156 Gd~~t~ADi~l~~~~~~~-~~~~~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~~~~ 210 (215)
T PRK13972 156 GENYSIADIACWPWVNAW-TRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGD 210 (215)
T ss_pred CCCCCHHHHHHHHHHHHH-hhcCCcchhCHHHHHHHHHHHhCHHHHHHHHHhcccc
Confidence 999999999999887555 3345567899999999999999999999988776553
No 6
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=9.1e-37 Score=237.35 Aligned_cols=203 Identities=21% Similarity=0.252 Sum_probs=168.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCC
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
.|+||+.+.|++++|++++|+++|++|+.+.++...++...++++++||+|++|+|+++|..|+||.+|++||+++++..
T Consensus 2 ~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~ 81 (214)
T PLN02473 2 VVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQ 81 (214)
T ss_pred ceEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCc
Confidence 47999999999999999999999999999999988888889999999999999999999999999999999999999742
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHh---ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceee
Q 026781 102 --ALLPAADPQQRALNLQAASIISSSMQPLHMLSLLK-YIED---KFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYAT 175 (233)
Q Consensus 102 --~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~ 175 (233)
.|+|. ++.+++++++|+.+..+.+.+.....+.. .+.. ........+...+++.+.++.||+.|+. ++|++
T Consensus 82 ~~~l~p~-~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~ 158 (214)
T PLN02473 82 GTDLLGK-TLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLAT--NRYLG 158 (214)
T ss_pred CCCCCCC-CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhcc--CCccc
Confidence 58999 99999999999999888776543322221 1211 1112344566778899999999999987 78999
Q ss_pred cCCccHhHHhhhhHHHHHHHHhCC--CCCCCchHHHHHHHhhCChhhhhhCCCC
Q 026781 176 GEDVYMADVFLAPQIAVVTMRFNI--DMSKFPTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 176 G~~~t~ADi~~~~~l~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
|+++|+|||++++.+.+....... .+++||+|.+|++++.+||++++++...
T Consensus 159 Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~~ 212 (214)
T PLN02473 159 GDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMELA 212 (214)
T ss_pred CCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHHh
Confidence 999999999999998876322221 1478999999999999999999987653
No 7
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=5.9e-35 Score=227.29 Aligned_cols=203 Identities=24% Similarity=0.287 Sum_probs=166.0
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCC-
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQ- 100 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~- 100 (233)
.++||+. .+++++|++++|+++|++|+.+.++...++.+.++++++||.|+||+|+++|.+|+||.+|++||+++++.
T Consensus 2 ~~~ly~~-~~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~ 80 (215)
T PLN02395 2 VLKVYGP-AFASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQ 80 (215)
T ss_pred eEEEEcC-CcCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCC
Confidence 3799974 55679999999999999999999998777778899999999999999999999999999999999999874
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHh---ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceee
Q 026781 101 -RALLPAADPQQRALNLQAASIISSSMQPLHMLSLLK-YIED---KFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYAT 175 (233)
Q Consensus 101 -~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~ 175 (233)
..|+|. ++.+++++++|+.+....+.+.+...... .+.. ....+...+...+.+.+.++.||+.|++ ++|++
T Consensus 81 ~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~ 157 (215)
T PLN02395 81 GPDLLGK-TIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSK--SKYLA 157 (215)
T ss_pred CcCcCCC-ChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcC--Ccccc
Confidence 359999 99999999999999887776543322221 1111 1223344566788899999999999987 78999
Q ss_pred cCCccHhHHhhhhHHHHHHHHhC--CCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 176 GEDVYMADVFLAPQIAVVTMRFN--IDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 176 G~~~t~ADi~~~~~l~~~~~~~~--~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
|+++|+||+++++++.+.....+ ..+..||+|.+|++++.+||+++++++...
T Consensus 158 G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 158 GDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred CCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 99999999999998877622212 235789999999999999999999987654
No 8
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=1.4e-35 Score=228.45 Aligned_cols=196 Identities=21% Similarity=0.349 Sum_probs=162.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCC-CCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGE-QFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQ 100 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~-~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~ 100 (233)
|+||+...| ++++++++|+++|++|+.+.+++..++ ...++|.++||.|++|+|+ +||..|+||.+|++||+++++.
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~ 79 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD 79 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc
Confidence 589987655 799999999999999999999987653 4568899999999999998 6889999999999999999987
Q ss_pred CCCC-CCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCc
Q 026781 101 RALL-PAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDV 179 (233)
Q Consensus 101 ~~l~-p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~ 179 (233)
..++ |. ++.+++++++|+.+..+.+.+.+... +. ....+...+...+.+.+.+..||+.|+. ++|++|+++
T Consensus 80 ~~l~~p~-~~~~ra~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~ 151 (201)
T PRK10542 80 RQLLAPV-GSLSRYHTIEWLNYIATELHKGFTPL----FR-PDTPEEYKPTVRAQLEKKFQYVDEALAD--EQWICGQRF 151 (201)
T ss_pred cccCCCC-CcHHHHHHHHHHHHHHhhhhhhhhhc----cC-CCChHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCC
Confidence 6665 66 78899999999998877665432221 11 1122333456778899999999999987 789999999
Q ss_pred cHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 180 YMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 180 t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
|+|||++++++.+. ...+.+++.||+|.+|++++.++|++++++....
T Consensus 152 s~ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~~~~~ 199 (201)
T PRK10542 152 TIADAYLFTVLRWA-YAVKLNLEGLEHIAAYMQRVAERPAVAAALKAEG 199 (201)
T ss_pred cHHhHHHHHHHHHh-hccCCCcccchHHHHHHHHHHcCHHHHHHHHHcc
Confidence 99999999999888 5566667889999999999999999999987653
No 9
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=4.3e-34 Score=228.19 Aligned_cols=203 Identities=23% Similarity=0.318 Sum_probs=161.5
Q ss_pred CCCceEEeeeCCChhhHHHHHHHHHc------CCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC----CeeechHH
Q 026781 19 SSSKLVLYSYWQSSCSWRVRFALKLK------GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG----DVVVSDSY 88 (233)
Q Consensus 19 ~~~~~~Ly~~~~s~~~~~~~~~l~~~------gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~----g~~l~es~ 88 (233)
..++|+||+. .||++++|+++|+++ |++|+.+.+++..++...++|+++||.|+||+|+++ +..|+||.
T Consensus 41 ~~~~~~Ly~~-~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~ 119 (264)
T PRK11752 41 GKHPLQLYSL-GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESG 119 (264)
T ss_pred CCCCeEEecC-CCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHH
Confidence 3457999975 599999999999997 999999999988777788999999999999999953 36899999
Q ss_pred HHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHH-hccCchHHHHHHHHHHHHHHHHHHHHHh
Q 026781 89 AILLYLEEKYPQRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIE-DKFGPDERLLWVQTHIEKGFLALEKLLI 167 (233)
Q Consensus 89 ~I~~yL~~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~ 167 (233)
+|++||+++++ .|+|. ++.+++++++|+.+....+. .....+...+. .....+...+...+++.+.|+.||++|+
T Consensus 120 AIl~YL~~~~~--~L~P~-~~~era~v~~wl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~ 195 (264)
T PRK11752 120 AILLYLAEKFG--AFLPK-DLAARTETLNWLFWQQGSAP-FLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLA 195 (264)
T ss_pred HHHHHHHHhcC--CcCCC-CHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999997 49999 99999999999998765432 11111111111 1111233445667788999999999998
Q ss_pred hcCCceeecCCccHhHHhhhhHHHHHHHH--h----CCCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 168 DFAAKYATGEDVYMADVFLAPQIAVVTMR--F----NIDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 168 ~~~~~~l~G~~~t~ADi~~~~~l~~~~~~--~----~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
. ++||+|+++|+|||++++.+.++... . ..+++.||+|.+|++++.+||++++++..+.
T Consensus 196 ~--~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 196 E--HEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVNR 260 (264)
T ss_pred c--CCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhccc
Confidence 7 78999999999999999988776221 0 1235789999999999999999999987654
No 10
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-34 Score=222.59 Aligned_cols=194 Identities=37% Similarity=0.496 Sum_probs=168.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCC-eeechHHHHHHHHHhhCCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGD-VVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g-~~l~es~~I~~yL~~~~~~~ 101 (233)
++||+.+.||++++++++|.++|++|+.+.++... +.+.++|+.+||.|+||+|++++ ..|+||.+|++||++++|+.
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 58999999999999999999999999999999987 77899999999999999999655 59999999999999999876
Q ss_pred CCCCCCCHH---HHHHHHHHHHHHHhccchhHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHhhcCCceeecC
Q 026781 102 ALLPAADPQ---QRALNLQAASIISSSMQPLHMLSLLKYIEDKFG-PDERLLWVQTHIEKGFLALEKLLIDFAAKYATGE 177 (233)
Q Consensus 102 ~l~p~~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~ 177 (233)
.|+|. ++. +++++..|+.+....+.+.+............. .+...+...+.+.+.++.+|..|+. ++|++|+
T Consensus 80 ~l~p~-~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~ 156 (211)
T COG0625 80 PLLPA-DPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLAD--GPYLAGD 156 (211)
T ss_pred CcCCC-CchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCC
Confidence 69998 664 888888999999888888766654443111112 3556778889999999999999998 8999999
Q ss_pred CccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhh
Q 026781 178 DVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFL 221 (233)
Q Consensus 178 ~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 221 (233)
++|+||+++++.+.++ ...+..++.||++.+|++|+.++|+++
T Consensus 157 ~~tiAD~~~~~~~~~~-~~~~~~~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 157 RFTIADIALAPLLWRL-ALLGEELADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CCCHHHHHHHHHHHHh-hhcCcccccChHHHHHHHHHHcCCchh
Confidence 9999999999999997 666666789999999999999999965
No 11
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=3.1e-34 Score=221.21 Aligned_cols=197 Identities=21% Similarity=0.234 Sum_probs=158.1
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
++||++..||++++++++|+++|++|+.+.++... ..+++.+.||.|++|+|+ ++|..++||.+|++||++++++.
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~---~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYN---ADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCC---CchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999887653 334666789999999998 78899999999999999998876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccH
Q 026781 102 ALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYM 181 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ 181 (233)
.|+|. ++.+++++++|+.+..+.+..................+...+...+.+.+.|+.||++|.+ ++ ++|+++|+
T Consensus 78 ~l~p~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~-l~Gd~~t~ 153 (202)
T PRK10357 78 AMLPR-DPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVD--GT-LKTDTVNL 153 (202)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhcc--Cc-ccCCCcCH
Confidence 79999 9999999999988876655443222211111111122334456778899999999999986 66 99999999
Q ss_pred hHHhhhhHHHHHHHHhC--CC-CCCCchHHHHHHHhhCChhhhhhCCCC
Q 026781 182 ADVFLAPQIAVVTMRFN--ID-MSKFPTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 182 ADi~~~~~l~~~~~~~~--~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
||+++++.+.+. .... .. ...||+|.+|++++.+||+|+++.+..
T Consensus 154 ADi~l~~~l~~~-~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 154 ATIAIACAVGYL-NFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred HHHHHHHHHHHH-HhcccCcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 999999999877 3322 22 378999999999999999999988754
No 12
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-33 Score=213.68 Aligned_cols=196 Identities=26% Similarity=0.332 Sum_probs=167.5
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcC-CCCCcceEEeCCeeechHHHHHHHHHhhCC
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELN-PLHFVPVLVDGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~-p~g~~P~L~~~g~~l~es~~I~~yL~~~~~ 99 (233)
..++||++..|||++|++++|+++||+|+.+..++. .+.+++++.| +.++||||+++|.+|+||..|++||++.++
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~---~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~ 84 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT---NKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWP 84 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhcCCceEEEecCCC---CCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhcc
Confidence 469999999999999999999999999999999987 4899999999 689999999999999999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCC
Q 026781 100 -QRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGED 178 (233)
Q Consensus 100 -~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 178 (233)
+.+++|. |+.+|++.+.|.++++..+......... ...++..+...+.+.+.|..||+.|.. +++|+.|++
T Consensus 85 ~~~~iLP~-DPy~Ra~arfwa~~id~~~~~~~~~~~~------~~~~e~~~~~~~e~~e~l~~lE~el~k-~k~~fgG~~ 156 (231)
T KOG0406|consen 85 SGPPILPS-DPYERAQARFWAEYIDKKVFFVGRFVVA------AKGGEEQEAAKEELREALKVLEEELGK-GKDFFGGET 156 (231)
T ss_pred CCCCCCCC-CHHHHHHHHHHHHHHHhHHHHHHHHHHh------hcCchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCC
Confidence 5889999 9999999999999999876543222211 113355677888899999999999993 489999999
Q ss_pred ccHhHHhhhhHHHHHHHHh---C---C-CCCCCchHHHHHHHhhCChhhhhhCCCC
Q 026781 179 VYMADVFLAPQIAVVTMRF---N---I-DMSKFPTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 179 ~t~ADi~~~~~l~~~~~~~---~---~-~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
++++|+++++.+....... + . ..+++|.|.+|.+||.+++++++++++.
T Consensus 157 ~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 157 IGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred cCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 9999999997776552221 1 1 2489999999999999999999998864
No 13
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=3.1e-33 Score=215.91 Aligned_cols=192 Identities=17% Similarity=0.229 Sum_probs=146.5
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhh--------hcCCCCCcceEEeCCeeechHHHHHH
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFE--------ELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~--------~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
.+++|||++.+++++++|++|+++|++|+.+.+.. .. +.+. +.||+|++|+|++||..|+||.||++
T Consensus 3 ~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~----~~-~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~ 77 (205)
T PTZ00057 3 EEIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE----NG-DAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVR 77 (205)
T ss_pred CceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc----cc-hHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 34899999999999999999999999999997632 11 2222 47999999999999999999999999
Q ss_pred HHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026781 93 YLEEKYPQRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAK 172 (233)
Q Consensus 93 yL~~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 172 (233)
||+++++ +.+. +..+++.+..+.....+........ ..+ .+...+...+.+.+.+..||+.|++++++
T Consensus 78 YLa~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 145 (205)
T PTZ00057 78 YLSKKYK---ICGE-SELNEFYADMIFCGVQDIHYKFNNT---NLF-----KQNETTFLNEELPKWSGYFENILKKNHCN 145 (205)
T ss_pred HHHHHcC---CCCC-CHHHHHHHHHHHHHHHHHHHHHhhh---HHH-----HHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999997 4566 5555555544433322221111110 011 11223456788999999999999875458
Q ss_pred eeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCC
Q 026781 173 YATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQP 229 (233)
Q Consensus 173 ~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 229 (233)
|++|+++|+||+++++++.+.....+.++++||+|.+|++|+.++|+++++++++..
T Consensus 146 ~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~~ 202 (205)
T PTZ00057 146 YFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLPNIKNYISNRKE 202 (205)
T ss_pred eeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhChHHHHHHHhCCC
Confidence 999999999999999998887333456679999999999999999999999987763
No 14
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-32 Score=210.60 Aligned_cols=201 Identities=33% Similarity=0.421 Sum_probs=175.3
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCC-C
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYP-Q 100 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~-~ 100 (233)
+++||++..|+.++++.++++++|++|+.+.++...+++..++|+++||.|+||+|+|+|..++||.||+.||.++|. .
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~ 81 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPL 81 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999999986 3
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHHhccchhH--HHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecC
Q 026781 101 RA-LLPAADPQQRALNLQAASIISSSMQPLH--MLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGE 177 (233)
Q Consensus 101 ~~-l~p~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~ 177 (233)
.. ++|. +..+++.+++|+.+..+.+.+.. ...+.+......-.....+.....+.+.++.+|..|.+ +.|+.|+
T Consensus 82 ~~~l~p~-~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~--~~yl~g~ 158 (226)
T KOG0867|consen 82 GGILLPK-DLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKT--QVYLAGD 158 (226)
T ss_pred CcccCCc-CHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHcc--CCcccCC
Confidence 34 8999 99999999999999999888763 33333323333335566788899999999999999998 8999999
Q ss_pred CccHhHHhhhhHHHHHH-HHh-CCCCCCCchHHHHHHHhhCChhhhhhCC
Q 026781 178 DVYMADVFLAPQIAVVT-MRF-NIDMSKFPTLLRIYESYKGLPEFLASSP 225 (233)
Q Consensus 178 ~~t~ADi~~~~~l~~~~-~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 225 (233)
++|+||+.+.+.+..+. ... .....+||++.+|++++.++|+++++..
T Consensus 159 ~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~ 208 (226)
T KOG0867|consen 159 QLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANE 208 (226)
T ss_pred cccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHH
Confidence 99999999999999883 222 3456899999999999999999988654
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.97 E-value=1.7e-30 Score=202.33 Aligned_cols=182 Identities=24% Similarity=0.337 Sum_probs=143.0
Q ss_pred eCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCC---CCCC
Q 026781 28 YWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQ---RALL 104 (233)
Q Consensus 28 ~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~---~~l~ 104 (233)
...||+|++++++|+++|++|+.+.+++. .+.++|+++||.|++|+|+++|..|+||.+|++||+++++. +.+.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~---~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~ 92 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLK---RKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLS 92 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCC---CCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCC
Confidence 36799999999999999999999999987 35789999999999999999999999999999999999964 3355
Q ss_pred CCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhc---------------
Q 026781 105 PAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDF--------------- 169 (233)
Q Consensus 105 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--------------- 169 (233)
|. ++..++....+. .. +..++.. ..+...+...+.+.+.++.||+.|.+.
T Consensus 93 p~-~~~~~~~~~~l~--------~~----~~~~~~~--~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~ 157 (236)
T TIGR00862 93 PK-HPESNTAGLDIF--------AK----FSAYIKN--SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKV 157 (236)
T ss_pred CC-CHHHHHHHHHHH--------HH----HHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccc
Confidence 65 554444221111 11 1111111 123334556677999999999999731
Q ss_pred -CCceeecCCccHhHHhhhhHHHHHHHHh-----CCC-CCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 170 -AAKYATGEDVYMADVFLAPQIAVVTMRF-----NID-MSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 170 -~~~~l~G~~~t~ADi~~~~~l~~~~~~~-----~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
+++|+.|+++|+|||++++.+.++ ... +++ .++||+|.+|++++.++|+|+++++..+
T Consensus 158 ~~~~f~~Gd~~tlaD~~l~p~l~~l-~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~ 222 (236)
T TIGR00862 158 SRRKFLDGDELTLADCNLLPKLHIV-KVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDK 222 (236)
T ss_pred cCCCcccCCccchhhHHHHHHHHHH-HHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChH
Confidence 379999999999999999999888 432 666 5999999999999999999999987654
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.97 E-value=6.8e-31 Score=203.90 Aligned_cols=180 Identities=25% Similarity=0.289 Sum_probs=139.0
Q ss_pred eCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCCCCCCCC
Q 026781 28 YWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAA 107 (233)
Q Consensus 28 ~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~ 107 (233)
+..||+++|++++|+++|++|+.+.+++. .+.++|+++||.|+||+|+++|..|+||.+|++||++++++..+ .
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~- 90 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLS---DKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--K- 90 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcc---cCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--C-
Confidence 35699999999999999999999999886 35678999999999999999999999999999999999986544 4
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhh
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 187 (233)
++.+++.+...+.. . +..+.... ...+...+.+.+.|+.||+.|+.++++|++||++|+||++++
T Consensus 91 ~~~~~a~i~~~~~~-------~----~~~~~~~~----~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~ 155 (213)
T PLN02378 91 TPAEFASVGSNIFG-------T----FGTFLKSK----DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLA 155 (213)
T ss_pred CHHHHHHHHHHHHH-------H----HHHHHhcC----ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHH
Confidence 55666665543211 1 11111111 111233467788899999999854479999999999999999
Q ss_pred hHHHHHHHHh----CCC-CCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 188 PQIAVVTMRF----NID-MSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 188 ~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
+.+.++.... ... .+.||+|.+|++++.+||++++++....
T Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~ 201 (213)
T PLN02378 156 PKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEK 201 (213)
T ss_pred HHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChH
Confidence 9987752111 122 3789999999999999999999987653
No 17
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.6e-29 Score=189.20 Aligned_cols=201 Identities=18% Similarity=0.200 Sum_probs=161.5
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCC
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~ 99 (233)
|+.++|+|+...+++..+|++++.+|++|+++++...++ .+......|+|++|+|..||..|.+|.||+|||+++++
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC
Confidence 456899999999999999999999999999999987652 12223336999999999999999999999999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHH-HHHHHHHHHHHHHHHHHhhcCCceeecCC
Q 026781 100 QRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLL-WVQTHIEKGFLALEKLLIDFAAKYATGED 178 (233)
Q Consensus 100 ~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 178 (233)
|.|+ ++.+.+.++.+.+...+....+....+.... ....+...+ .......+.+..+++.|..+++.||+||+
T Consensus 78 ---l~Gk-t~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~--~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~ 151 (206)
T KOG1695|consen 78 ---LAGK-TEEEEAWVDMIVDQFKDFRWEIFRQPYTAPE--AGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDK 151 (206)
T ss_pred ---cCCC-CHHHHHHHHHHHHhhhhHHHHHHHHhhhhhh--hccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCc
Confidence 9999 9999999999988777655442222222111 111122222 56677888999999999977788999999
Q ss_pred ccHhHHhhhhHHHHHHHHhCCC-CCCCchHHHHHHHhhCChhhhhhCCCCCC
Q 026781 179 VYMADVFLAPQIAVVTMRFNID-MSKFPTLLRIYESYKGLPEFLASSPERQP 229 (233)
Q Consensus 179 ~t~ADi~~~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 229 (233)
+|+||+.++..+..+...+..+ ++.||.|+++.+++.++|.++++++.++.
T Consensus 152 lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 152 LTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred ccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 9999999999999993323433 57889999999999999999999988765
No 18
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.97 E-value=4.7e-29 Score=198.27 Aligned_cols=176 Identities=22% Similarity=0.293 Sum_probs=138.3
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCCCCCCCCC
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAAD 108 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~ 108 (233)
..||++++++++|+++|++|+.+.+++. .+.++|+++||.|++|+|+++|..|+||.+|++||++++++..+ . +
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L--~-~ 144 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPL--A-T 144 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCC--C-C
Confidence 4599999999999999999999999875 46789999999999999998888999999999999999987555 3 5
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 109 PQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 109 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
+.+++.++.++... +...+... .. .+...+.+.+.+..||++|+++ ++|++|+++|+|||++++
T Consensus 145 ~~era~i~~~l~~~-----------~~~~~~~~--~~--~~~~~~~l~~~l~~LE~~L~~~-g~yl~Gd~~SlADi~l~p 208 (265)
T PLN02817 145 PPEKASVGSKIFST-----------FIGFLKSK--DP--GDGTEQALLDELTSFDDYIKEN-GPFINGEKISAADLSLGP 208 (265)
T ss_pred HHHHHHHHHHHHHH-----------HHHHhccC--Cc--chHHHHHHHHHHHHHHHHHhcC-CCeeCCCCCCHHHHHHHH
Confidence 57788776643211 11111111 11 1223356778899999999852 699999999999999999
Q ss_pred HHHHHHHHh----CCC-CCCCchHHHHHHHhhCChhhhhhCCC
Q 026781 189 QIAVVTMRF----NID-MSKFPTLLRIYESYKGLPEFLASSPE 226 (233)
Q Consensus 189 ~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~ 226 (233)
.+.++.... +.+ .+.||+|.+|++++.++|+|+++++.
T Consensus 209 ~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 209 KLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCC
Confidence 987763221 223 37899999999999999999999874
No 19
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=1.2e-29 Score=196.73 Aligned_cols=186 Identities=16% Similarity=0.183 Sum_probs=137.8
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
|+||++..||+|+|++++|+++|++|+.+.++... ... -.+.||.|+||+|+ ++|..++||.+|++||++++++.
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~--~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDD--EAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCc--hhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 68999999999999999999999999998875432 221 25688999999995 88999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHH-------------H----HhccCc-h---HHHHHHHHHHHHHHH
Q 026781 102 ALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKY-------------I----EDKFGP-D---ERLLWVQTHIEKGFL 160 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~~~~-~---~~~~~~~~~~~~~l~ 160 (233)
.+ +. .+++.+++|+++....+...+...+... + ....+. + ...+...+.+.+.|+
T Consensus 77 ~l-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (210)
T PRK10387 77 LL-TG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLR 152 (210)
T ss_pred cC-CC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHH
Confidence 44 33 2467788888777655543321111100 0 000000 0 011356678999999
Q ss_pred HHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhh
Q 026781 161 ALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFL 221 (233)
Q Consensus 161 ~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 221 (233)
.||++|+ ++|++|+++|+||+++++.+.++ ...+. ...+|+|.+|++|+.+||++.
T Consensus 153 ~le~~L~---~~~l~G~~~s~ADi~l~~~l~~~-~~~~~-~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 153 ALDPLIV---KPNAVNGELSTDDIHLFPILRNL-TLVKG-IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHhc---CccccCCCCCHHHHHHHHHHhcc-eeecC-CCCCHHHHHHHHHHHHHhCCC
Confidence 9999995 38999999999999999999988 43321 235799999999999999863
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.95 E-value=3.2e-27 Score=182.74 Aligned_cols=184 Identities=16% Similarity=0.183 Sum_probs=132.3
Q ss_pred EEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCCC
Q 026781 24 VLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQRA 102 (233)
Q Consensus 24 ~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~~ 102 (233)
+||++..||+|+|+|++|.++|++|+.+.+... +. ....+.||.|++|+|+ +||..++||.+|++||+++++...
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~--~~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLND--DE--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCC--cc--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 589999999999999999999999998765432 12 2347899999999998 899999999999999999997643
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccchhHHHHHH-------------HHHHhc----cCch----HHHHHHHHHHHHHHHH
Q 026781 103 LLPAADPQQRALNLQAASIISSSMQPLHMLSLL-------------KYIEDK----FGPD----ERLLWVQTHIEKGFLA 161 (233)
Q Consensus 103 l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~----~~~~----~~~~~~~~~~~~~l~~ 161 (233)
+.|. .++++++|+.++...+...+...+. ..+.+. .+.. ...+...+.+.+.|+.
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 152 (209)
T TIGR02182 77 LTGK----VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEE 152 (209)
T ss_pred CCCC----ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHH
Confidence 3332 3566777776655544322211110 000000 0000 0013456788999999
Q ss_pred HHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCc-hHHHHHHHhhCChhhh
Q 026781 162 LEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFP-TLLRIYESYKGLPEFL 221 (233)
Q Consensus 162 le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 221 (233)
+|++|++ ++|+.| ++|+||+++++.+.++ ...+. -.+| +|.+|++|+.+++++.
T Consensus 153 le~~L~~--~~~l~g-~~TiADi~l~~~l~~~-~~~~~--~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 153 LDKLIDG--PNAVNG-ELSEDDILVFPLLRNL-TLVAG--INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHhC--ccccCC-CCCHHHHHHHHHhcCe-eeecC--CCCChHHHHHHHHHHHHhCCC
Confidence 9999987 899855 6999999999999887 43321 1356 9999999999998763
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=6.6e-26 Score=171.71 Aligned_cols=204 Identities=25% Similarity=0.294 Sum_probs=154.5
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCC-C
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQ-R 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~-~ 101 (233)
+.||+++.|-.++|||++++++|++|+...|++..+++..+||.++||.|.||||+++..+|+++..|+.|+++.+-+ .
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger 106 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGER 106 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999854 4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh---------cc----------chhHH---HHHHH-------HHHhcc----------
Q 026781 102 ALLPAADPQQRALNLQAASIISS---------SM----------QPLHM---LSLLK-------YIEDKF---------- 142 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~---------~~----------~~~~~---~~~~~-------~~~~~~---------- 142 (233)
.|.|..+..+..++.+.-...+. .+ -|... ..+.+ ......
T Consensus 107 ~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ak 186 (325)
T KOG4420|consen 107 VLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAK 186 (325)
T ss_pred cccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHH
Confidence 57776343344433333221111 00 01011 00000 000000
Q ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHHhhcC--CceeecCCccHhHHhhhhHHHHHHHHhCCC---C--CCC
Q 026781 143 -----------GPDERLLWVQTHIEKGFLALEKLLIDFA--AKYATGEDVYMADVFLAPQIAVVTMRFNID---M--SKF 204 (233)
Q Consensus 143 -----------~~~~~~~~~~~~~~~~l~~le~~L~~~~--~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~---~--~~~ 204 (233)
......++....+..+|+..|.-|..+. .+||+|+++|+||+.+.+.|+++ ..+|+. + ...
T Consensus 187 qkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL-~~Lg~e~~yw~~gsr 265 (325)
T KOG4420|consen 187 QKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRL-KFLGLEKKYWEDGSR 265 (325)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHH-HHcccHHHhcccCCC
Confidence 0112245666777888888888887532 48999999999999999999999 777764 3 588
Q ss_pred chHHHHHHHhhCChhhhhhCCCC
Q 026781 205 PTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 205 p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
|+|..|++|++.|++|++++...
T Consensus 266 pnle~Yf~rvrrR~sf~kvlg~~ 288 (325)
T KOG4420|consen 266 PNLESYFERVRRRFSFRKVLGDI 288 (325)
T ss_pred ccHHHHHHHHHhhhHHHHhhhhH
Confidence 99999999999999999998753
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.90 E-value=8e-23 Score=181.10 Aligned_cols=154 Identities=14% Similarity=0.096 Sum_probs=127.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
++||+.+.| .+.+++++|++.|++|+.+. .+|.|++|+|+ ++|..++||.+|++||++.++..
T Consensus 3 ~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~ 66 (722)
T PLN02907 3 AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLP 66 (722)
T ss_pred EEEEECCCC-ChHHHHHHHHHcCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCc
Confidence 789966555 58889999999999999864 14899999999 68999999999999999999877
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccH
Q 026781 102 ALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYM 181 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ 181 (233)
.|+|. ++.+++++++|+.+...... ...+.+.++.||++|+. ++||+|+++|+
T Consensus 67 ~L~p~-d~~erAqV~qWL~~~~~~~~------------------------~~~l~~~L~~LE~~L~~--rtYLvGd~lTL 119 (722)
T PLN02907 67 GFYGQ-DAFESSQVDEWLDYAPTFSS------------------------GSEFENACEYVDGYLAS--RTFLVGYSLTI 119 (722)
T ss_pred CCCCC-CHHHHHHHHHHHHHHhhccc------------------------HHHHHHHHHHHHHHhcc--CCeecCCCCCH
Confidence 79999 99999999999988754210 01345678999999987 89999999999
Q ss_pred hHHhhhhHHHHHH-HHhCC-CCCCCchHHHHHHHhhCChh
Q 026781 182 ADVFLAPQIAVVT-MRFNI-DMSKFPTLLRIYESYKGLPE 219 (233)
Q Consensus 182 ADi~~~~~l~~~~-~~~~~-~~~~~p~l~~~~~~~~~~p~ 219 (233)
|||++++.+.... ..... ....||+|.+|++++.++|+
T Consensus 120 ADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 120 ADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 9999999886541 11112 24789999999999999999
No 23
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.88 E-value=5.2e-21 Score=141.30 Aligned_cols=183 Identities=23% Similarity=0.315 Sum_probs=142.1
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCCCCCCCCC
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAAD 108 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~ 108 (233)
..||+++++.+.|+++|++|.++.|++. .+.+||++++|.|++|+|..|+..++||..|.++|++.++.+.+.-- .
T Consensus 19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~---~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~-~ 94 (221)
T KOG1422|consen 19 GDCPFCQRLFMTLELKGVPFKVTTVDLS---RKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTL-A 94 (221)
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecC---CCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCccc-C
Confidence 5799999999999999999999999988 57889999999999999999999999999999999999986543221 1
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhh-cCCceeecCCccHhHHhhh
Q 026781 109 PQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLID-FAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 109 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~t~ADi~~~ 187 (233)
+.|.+-+- .+.+. -+..+... ..+...+...+.+.+.|+.|+.+|+. +.++|+.||++|.|||.+.
T Consensus 95 ~~E~asag--~diF~---------kF~~fi~k--sk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLl 161 (221)
T KOG1422|consen 95 PPESASAG--SDIFA---------KFSAFIKK--SKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLL 161 (221)
T ss_pred CHHHHhhH--HHHHH---------HHHHHHhC--chhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhc
Confidence 22222111 11111 01112111 23445567778889999999999997 5589999999999999999
Q ss_pred hHHHHHHHHhC----CCC-CCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 188 PQIAVVTMRFN----IDM-SKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 188 ~~l~~~~~~~~----~~~-~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
+-|+.+.-..+ ++. +.++.+++|.+.+.++.+|.++.+..+
T Consensus 162 PKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ 207 (221)
T KOG1422|consen 162 PKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQ 207 (221)
T ss_pred hhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHH
Confidence 99998832222 233 788999999999999999999987654
No 24
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.81 E-value=9.8e-20 Score=116.92 Aligned_cols=73 Identities=44% Similarity=0.584 Sum_probs=68.9
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++||++..|+++++++++|+++|++|+.+.++...++.+.+++.++||.|++|+|++||..++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999999999988777788899999999999999999999999999999985
No 25
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.79 E-value=7.6e-19 Score=113.38 Aligned_cols=74 Identities=45% Similarity=0.585 Sum_probs=69.4
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
++||+++.||+|++++++|+++|++|+.+.+++..++...+++.+.||.|++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 58999999999999999999999999999999877767789999999999999999989999999999999974
No 26
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.78 E-value=7.9e-19 Score=113.52 Aligned_cols=74 Identities=50% Similarity=0.710 Sum_probs=69.0
Q ss_pred EeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCC
Q 026781 25 LYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 25 Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
||++..||+|+|+|++|+++|++|+.+.++.. ...+++.+.||.+++|+|++||..++||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~---~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPE---EKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTT---STSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcc---cchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 79999999999999999999999999999865 347899999999999999999999999999999999999853
No 27
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.78 E-value=1.6e-18 Score=112.48 Aligned_cols=76 Identities=45% Similarity=0.676 Sum_probs=70.6
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~ 98 (233)
++||+++.|+++++++++|+++|++|+.+.++...++...+++.+.||.|++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5799999999999999999999999999999987766677899999999999999999999999999999999864
No 28
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.77 E-value=1.8e-18 Score=112.27 Aligned_cols=75 Identities=47% Similarity=0.641 Sum_probs=69.8
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEK 97 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~ 97 (233)
++||+++.||++++++++|+++|++|+.+.++...++...+++.+.||.|++|+|+++|..++||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 689999999999999999999999999999988766667789999999999999999999999999999999863
No 29
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.77 E-value=2.5e-18 Score=112.90 Aligned_cols=77 Identities=44% Similarity=0.647 Sum_probs=70.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC---CeeechHHHHHHHHHhhC
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG---DVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~---g~~l~es~~I~~yL~~~~ 98 (233)
+++||+++. |++++++++|+++|++|+.+.++...++...+++.+.||.|++|+|+++ |..++||.+|++||++++
T Consensus 1 ~~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 1 MITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred CeEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 379998775 9999999999999999999999987666778899999999999999976 899999999999999987
Q ss_pred C
Q 026781 99 P 99 (233)
Q Consensus 99 ~ 99 (233)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 5
No 30
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.75 E-value=5.6e-18 Score=108.99 Aligned_cols=73 Identities=40% Similarity=0.550 Sum_probs=67.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~ 98 (233)
|+||+.+.||+|++++++|+++|++|+.+.++.. ...+++.+.||.|++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999988764 456889999999999999999999999999999999864
No 31
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.75 E-value=4.6e-18 Score=109.35 Aligned_cols=73 Identities=44% Similarity=0.649 Sum_probs=68.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++||+++.||+|++++++|+++|++|+.+.++...++...+++.+.||.|++|+|+++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999887666778899999999999999998999999999999984
No 32
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.75 E-value=5.6e-18 Score=108.98 Aligned_cols=73 Identities=38% Similarity=0.448 Sum_probs=67.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++||++..|+++++++++|+++|++|+.+.++...++...+++.++||.|++|+|+++|..++||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999998876555677899999999999999999999999999999984
No 33
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.75 E-value=7.6e-18 Score=108.68 Aligned_cols=73 Identities=36% Similarity=0.576 Sum_probs=66.6
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCC-CCcceEEeCCeeechHHHHHHHHHhhC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPL-HFVPVLVDGDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~-g~~P~L~~~g~~l~es~~I~~yL~~~~ 98 (233)
|+||++..||+|++++++|+++|++|+.+.++.. .+.+++.+.||. |++|+|+++|..++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 5899999999999999999999999999987765 567889999995 999999999999999999999999864
No 34
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=4.6e-18 Score=110.46 Aligned_cols=75 Identities=31% Similarity=0.257 Sum_probs=65.7
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe--CCeeechHHHHHHHHHhhC
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD--GDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~--~g~~l~es~~I~~yL~~~~ 98 (233)
+++||+++.||+|++++++|.++|++|+.+.++ .++...+++.+.||.|++|+|++ +|..++||.+|++||++++
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~--~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCP--KGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECC--CChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 379999999999999999999999999998774 23344678999999999999995 4789999999999999874
No 35
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.74 E-value=5.6e-17 Score=114.74 Aligned_cols=118 Identities=38% Similarity=0.676 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccC--chHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhh
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFG--PDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 187 (233)
.+++++++|+.+..+.+.+.+............. .+...+...+.+.+.|+.||+.|++++++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 4789999999999988887543333333222111 22334556677899999999999852258999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 188 PQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 188 ~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
+.+.+. ...+.++..||+|.+|++++.++|+|+++++..+
T Consensus 82 ~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 121 (121)
T cd03191 82 PQVYNA-RRFGVDLSPYPTIARINEACLELPAFQAAHPDNQ 121 (121)
T ss_pred HHHHHH-HHhCCCcccCcHHHHHHHHHHhChhHHHhCcCcC
Confidence 999877 5566667899999999999999999999988654
No 36
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.74 E-value=1.3e-17 Score=108.10 Aligned_cols=76 Identities=49% Similarity=0.735 Sum_probs=68.8
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~ 99 (233)
++||+++. +++++++++|+++|++|+.+.++...++.+.+++.+.||.+++|+|+++|..++||.+|++||+++++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 57997764 68999999999999999999998766667789999999999999999999999999999999999874
No 37
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.74 E-value=8.7e-18 Score=108.32 Aligned_cols=73 Identities=44% Similarity=0.545 Sum_probs=67.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~ 95 (233)
|+||+++.||+|++++++|+++|++|+.+.++...++...+++.+.||.+++|+|+ ++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999999999999999999999999998876656678899999999999999 68899999999999985
No 38
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.74 E-value=9.9e-18 Score=107.81 Aligned_cols=73 Identities=55% Similarity=0.910 Sum_probs=68.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
|+||++..|+++++++++|+++|++|+.+.++...+....+++.+.||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999987766777899999999999999999999999999999985
No 39
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.74 E-value=1.6e-17 Score=108.01 Aligned_cols=76 Identities=36% Similarity=0.467 Sum_probs=68.7
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC-CeeechHHHHHHHHHhhCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG-DVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~-g~~l~es~~I~~yL~~~~~ 99 (233)
++||+++.+ ++++++++|+++|++|+.+.++...++.+.+++.++||.+++|+|+++ |..++||.+|++||++++|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 579988755 689999999999999999999988777788999999999999999965 8999999999999999875
No 40
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.74 E-value=1.6e-17 Score=107.48 Aligned_cols=74 Identities=45% Similarity=0.622 Sum_probs=65.0
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCC-CCcceEEeC-CeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPL-HFVPVLVDG-DVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~-g~~P~L~~~-g~~l~es~~I~~yL~~ 96 (233)
|+|+++..+++++++|++|+++|++|+.+.+++..++.+.+++.+.||. |++|+|+++ |..++||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 3455566667999999999999999999999998887777999999999 999999988 9999999999999975
No 41
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.74 E-value=1.6e-17 Score=109.83 Aligned_cols=69 Identities=25% Similarity=0.346 Sum_probs=64.2
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCC
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQ 100 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~ 100 (233)
..||||+++|++|+++|++|+.+.+++. ...++|+++||+|++|+|+++|..++||.+|++||+++++.
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~---~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK---RKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC---CCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 5689999999999999999999999876 46789999999999999999999999999999999999864
No 42
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.73 E-value=9.1e-18 Score=107.92 Aligned_cols=73 Identities=22% Similarity=0.280 Sum_probs=65.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhh
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEK 97 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~ 97 (233)
+++||++..|++++++|++|+++|++|+.+.++.. ...+++.+.||+|++|+|+++|..++||.+|++||+++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 37899999999999999999999999999998763 23457889999999999999999999999999999763
No 43
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.73 E-value=1.9e-17 Score=107.05 Aligned_cols=72 Identities=29% Similarity=0.359 Sum_probs=66.5
Q ss_pred EEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe-CCeeechHHHHHHHHHh
Q 026781 24 VLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD-GDVVVSDSYAILLYLEE 96 (233)
Q Consensus 24 ~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~-~g~~l~es~~I~~yL~~ 96 (233)
+||++..||++++++++|+++|++|+.+.++...+ .+.+++.++||.|++|+|++ +|..++||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 69999999999999999999999999999998654 67889999999999999995 68999999999999976
No 44
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.72 E-value=3.7e-17 Score=104.52 Aligned_cols=69 Identities=32% Similarity=0.495 Sum_probs=63.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe-CCeeechHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD-GDVVVSDSYAILLYL 94 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~-~g~~l~es~~I~~yL 94 (233)
++||++..||+|+|++++|+++|++|+.+.++.. ...+++.+.||.|++|+|++ ||..++||.+|++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~---~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELK---NKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC---CCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 4799999999999999999999999999999875 34578999999999999996 599999999999997
No 45
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.72 E-value=4e-17 Score=107.17 Aligned_cols=76 Identities=25% Similarity=0.335 Sum_probs=64.6
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCC-Chhhhh-----cCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQF-SPEFEE-----LNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~-~~~~~~-----~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
++|||+..++.+++++++|+++|++|+.+.+++..++.. .+++.. ..|+|+||+|++||..++||.||++||++
T Consensus 1 ~~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 1 PTLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred CEEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhh
Confidence 479999999999999999999999999999998765432 244432 22999999999999999999999999988
Q ss_pred hC
Q 026781 97 KY 98 (233)
Q Consensus 97 ~~ 98 (233)
++
T Consensus 81 ~~ 82 (82)
T cd03075 81 KH 82 (82)
T ss_pred cC
Confidence 64
No 46
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.71 E-value=2.1e-17 Score=105.97 Aligned_cols=72 Identities=22% Similarity=0.213 Sum_probs=64.1
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
++||++..|++++++|++|+++|++|+.+.++.... ..+++.+.||.+++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 589999999999999999999999999999876532 334588899999999999999999999999999974
No 47
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.69 E-value=6e-16 Score=118.57 Aligned_cols=179 Identities=21% Similarity=0.224 Sum_probs=126.6
Q ss_pred CceEEeeeC-------CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHH
Q 026781 21 SKLVLYSYW-------QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 21 ~~~~Ly~~~-------~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~y 93 (233)
..+-||.++ .||||.++.+.|+..+|||+.+...+ ...++.|++|.++-+|+.++||..|..+
T Consensus 44 D~VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~----------~~rSr~G~lPFIELNGe~iaDS~~I~~~ 113 (281)
T KOG4244|consen 44 DTVYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL----------KRRSRNGTLPFIELNGEHIADSDLIEDR 113 (281)
T ss_pred CeEEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccc----------eeeccCCCcceEEeCCeeccccHHHHHH
Confidence 345677653 68999999999999999999886542 2356889999999999999999999999
Q ss_pred HHhhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchh------------------------HHHHHHHHH-----Hhc---
Q 026781 94 LEEKYPQRALLPAADPQQRALNLQAASIISSSMQPL------------------------HMLSLLKYI-----EDK--- 141 (233)
Q Consensus 94 L~~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~------------------------~~~~~~~~~-----~~~--- 141 (233)
|.+.+.-...+ ++.++++.+++...++..+.-+ ....+.+++ .++
T Consensus 114 L~~hf~~~~~L---~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~ 190 (281)
T KOG4244|consen 114 LRKHFKIPDDL---SAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYK 190 (281)
T ss_pred HHHHcCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHH
Confidence 99988643213 3356666555543333221110 011111111 111
Q ss_pred --cCc--hHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC-------CCCCchHHHH
Q 026781 142 --FGP--DERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID-------MSKFPTLLRI 210 (233)
Q Consensus 142 --~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~-------~~~~p~l~~~ 210 (233)
.+. +=..++..+-+.+.|+.++..|++ ++||.||++|-+|+++|+.|..... ++. .+++|+|.+|
T Consensus 191 r~~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~--KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le~d~p~l~eY 266 (281)
T KOG4244|consen 191 RSTGAIGDFESAEIDELLHRDLRAISDYLGD--KKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLEGDFPNLLEY 266 (281)
T ss_pred HhhccccCcCHHHHHHHHHHHHHHHHHHhCC--CccccCCCCCcceeeehhhhhheec--cCCCcHHHHHhhhchHHHHH
Confidence 000 011344777788999999999998 9999999999999999999999833 431 2789999999
Q ss_pred HHHhhC
Q 026781 211 YESYKG 216 (233)
Q Consensus 211 ~~~~~~ 216 (233)
++|+++
T Consensus 267 ceRIr~ 272 (281)
T KOG4244|consen 267 CERIRK 272 (281)
T ss_pred HHHHHH
Confidence 999986
No 48
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.68 E-value=2.8e-16 Score=110.01 Aligned_cols=110 Identities=18% Similarity=0.104 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhh
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 187 (233)
++..++++++|+.+....+.+.+....+..... . +..+...+.+.+.++.||++|++ ++|++|+++|+|||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~i~~~l~~le~~L~~--~~yl~Gd~~tlADi~l~ 76 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRYP---E-ESEEEYRQQAEAFLKDLEARLQQ--HSYLLGDKPSLADWAIF 76 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhcC---c-ccHHHHHHHHHHHHHHHHHHHcc--CCccCCCCccHHHHHHH
Confidence 788999999999999998887655543332211 1 23667889999999999999997 79999999999999999
Q ss_pred hHHHHHHHHh---CCCCCCCchHHHHHHHhhCChhhhhhC
Q 026781 188 PQIAVVTMRF---NIDMSKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 188 ~~l~~~~~~~---~~~~~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
+.+.++ ... +....+||+|.+|++++.++|++++++
T Consensus 77 ~~l~~~-~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 77 PFVRQF-AHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHHHH-HHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 988776 322 233589999999999999999999864
No 49
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.68 E-value=1.7e-16 Score=104.86 Aligned_cols=70 Identities=40% Similarity=0.599 Sum_probs=61.3
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC-CeeechHHHHHHHHHhhCC
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG-DVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~-g~~l~es~~I~~yL~~~~~ 99 (233)
..||+|+|+|++|+++|++|+.+.++........+++ +.||.|++|+|+++ |..++||.+|++||+++++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 6799999999999999999999999876544444455 78999999999987 8999999999999999874
No 50
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.68 E-value=2.6e-16 Score=105.09 Aligned_cols=74 Identities=30% Similarity=0.301 Sum_probs=66.1
Q ss_pred CCCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC-CeeechHHHHHHHHH
Q 026781 19 SSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG-DVVVSDSYAILLYLE 95 (233)
Q Consensus 19 ~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~-g~~l~es~~I~~yL~ 95 (233)
...+++||++..||+|++++++|+++|++|+.+.++.. ...+++.+.||.+++|+|+++ |..++||.+|++||+
T Consensus 15 ~~~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~---~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 15 VPGIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLK---DKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCC---CCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 34569999999999999999999999999999998865 245678999999999999965 899999999999985
No 51
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.67 E-value=3.1e-16 Score=102.27 Aligned_cols=72 Identities=25% Similarity=0.343 Sum_probs=61.9
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhc-----CCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEEL-----NPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~-----~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
+++||+++.|+.+++++++|+++|++|+.+.++..+ ++.+. .|+|++|+|++||..++||.||++||.+
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~~------~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~ 74 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESAE------DLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAG 74 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccHH------HHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHH
Confidence 368999999999999999999999999999887532 22222 3699999999999999999999999999
Q ss_pred hCC
Q 026781 97 KYP 99 (233)
Q Consensus 97 ~~~ 99 (233)
+++
T Consensus 75 ~~~ 77 (79)
T cd03077 75 KYN 77 (79)
T ss_pred HcC
Confidence 876
No 52
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=1.8e-16 Score=101.88 Aligned_cols=70 Identities=29% Similarity=0.236 Sum_probs=63.6
Q ss_pred eEEeeeCCChhhHHHHHHHHH--cCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKL--KGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~--~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~ 95 (233)
++||++..||++++++++|++ +|++|+.+.++.. .+.+++.+.||.+++|+|+ ++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW---SDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc---cCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 8999999988753 4568899999999999998 68899999999999985
No 53
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.67 E-value=3e-16 Score=109.68 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHh--ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIED--KFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
+++++++|+.+..+.+.+.+.......... ....+...+...+.+.+.++.||+.|+. ++|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAG--GPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCcchHHHHHHH
Confidence 578999999999988887654332211100 0112344667888999999999999986 799999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhC
Q 026781 189 QIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 189 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
.+.++ ...+.++++||++.+|++++.++|++++++
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWA-PGVGLDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHH-hhcCCChhhChHHHHHHHHHHhCHHhHhhC
Confidence 99887 555556678999999999999999999864
No 54
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.67 E-value=2e-16 Score=101.10 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=60.1
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC-CeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG-DVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~-g~~l~es~~I~~yL~~ 96 (233)
|+||++..||+|+|+|++|.++|++|+.+.++... .....+.+|.+++|+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 57999999999999999999999999998876431 2234578899999999964 8999999999999974
No 55
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.67 E-value=6.3e-16 Score=107.96 Aligned_cols=110 Identities=16% Similarity=0.190 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHhccchhHHHHH-HHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSL-LKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQ 189 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~ 189 (233)
+++++++|+.+.+..+.+.+.... ...+ .....+...+...+++.+.++.+|+.|++ ++|++|+++|+|||++++.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l~~~ 77 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRY-APEKIPYAIERYTNEAKRLYGVLDKRLAG--RDYLAGDEYSIADIAIFPW 77 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHh-CCCCChHHHHHHHHHHHHHHHHHHHHHcc--CCcccCCCCCeeeeeHHHH
Confidence 478899999999998887544322 2112 12233455677889999999999999986 8999999999999999999
Q ss_pred HHHHHHHhCCC-CCCCchHHHHHHHhhCChhhhhhC
Q 026781 190 IAVVTMRFNID-MSKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 190 l~~~~~~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
+.+. ...+.. ...||++.+|++++.++|++++++
T Consensus 78 ~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 78 VRRL-EWIGIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHH-HhccccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 9888 555554 578999999999999999999875
No 56
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.66 E-value=5.3e-16 Score=100.20 Aligned_cols=67 Identities=30% Similarity=0.382 Sum_probs=60.1
Q ss_pred eEEeeeC-------CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYW-------QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~-------~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++||++. .||+|++++++|+++|++|+.+.++. .+.||.|++|+|+++|..++||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 6899887 68999999999999999999987753 257899999999999999999999999999
Q ss_pred hhCC
Q 026781 96 EKYP 99 (233)
Q Consensus 96 ~~~~ 99 (233)
++++
T Consensus 72 ~~~~ 75 (75)
T cd03080 72 EKYG 75 (75)
T ss_pred HHcC
Confidence 9874
No 57
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.65 E-value=4.1e-16 Score=99.24 Aligned_cols=68 Identities=57% Similarity=0.758 Sum_probs=58.4
Q ss_pred CChhhHHHHHHHHHcCCCceEEEeec-CCCCCCChhhhhcCCCCCcceEEe-CCeeechHHHHHHHHHhh
Q 026781 30 QSSCSWRVRFALKLKGLIYEYKAVDL-SKGEQFSPEFEELNPLHFVPVLVD-GDVVVSDSYAILLYLEEK 97 (233)
Q Consensus 30 ~s~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~~~~~~~~~~p~g~~P~L~~-~g~~l~es~~I~~yL~~~ 97 (233)
.|||++|++++|+++|++|+...+.. ..+....+++.+.||.|++|+|++ +|.++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 48999999999999999999988854 334456789999999999999995 899999999999999874
No 58
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.65 E-value=1.7e-15 Score=104.81 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhH
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQ 189 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~ 189 (233)
.++++++.|++++.+.+.+.+.... .. .++..+...+.+.+.+..||+.|++ ++|++|+++|+|||++++.
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~ 72 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIE----KG---RKKEAEKARKELRESLLALAPVFAH--KPYFMSEEFSLVDCALAPL 72 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH----hC---cHHHHHHHHHHHHHHHHHHHHHHcC--CCcccCCCCcHHHHHHHHH
Confidence 4789999999999987776543221 11 1444667888999999999999987 8999999999999999999
Q ss_pred HHHHHHHhCCCC-CCCchHHHHHHHhhCChhhhhhC
Q 026781 190 IAVVTMRFNIDM-SKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 190 l~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
+.+. ...+.++ ..+|+|.+|++++.+||++++++
T Consensus 73 ~~~~-~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~ 107 (107)
T cd03186 73 LWRL-PALGIELPKQAKPLKDYMERVFARDSFQKSL 107 (107)
T ss_pred HHHH-HHcCCCCcccchHHHHHHHHHHCCHHHHHhC
Confidence 8655 4456544 58999999999999999999863
No 59
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.65 E-value=7.7e-16 Score=108.42 Aligned_cols=112 Identities=20% Similarity=0.250 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQI 190 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l 190 (233)
+++++++|+.+....+.+.....+...... .+...+...+.+.+.++.||+.|++ ++|++|+++|+||+++++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~aDi~l~~~~ 76 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFG---GAEPPEEKLDKLEEALDFLETFLEG--SDYVAGDQLTIADLSLVATV 76 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHcc--CCeeCCCCcCHHHHHHHHHH
Confidence 578899999999887776554433322211 1234566778899999999999986 78999999999999999999
Q ss_pred HHHHHH-hCCCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 191 AVVTMR-FNIDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 191 ~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
.++ .. .+.+...||+|.+|++++.++|++++......
T Consensus 77 ~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 114 (118)
T cd03177 77 STL-EALLPLDLSKYPNVRAWLERLKALPPYEEANGKGA 114 (118)
T ss_pred HHH-HHhcCCChhhCchHHHHHHHHHcccchHHHHHHHH
Confidence 988 44 55556789999999999999999998765443
No 60
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.63 E-value=4.7e-15 Score=102.92 Aligned_cols=107 Identities=18% Similarity=0.211 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDK--FGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
+++++++|+.+..+.+.+.+...+....... ...+...+...+.+.+.++.||++|++ ++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~--~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAG--RPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCC--CCcccCCCCCHHHHHHHH
Confidence 4788999999998888887654433222111 123344567888999999999999987 799999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHhhCChhh
Q 026781 189 QIAVVTMRFNIDMSKFPTLLRIYESYKGLPEF 220 (233)
Q Consensus 189 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 220 (233)
++... ...+....+||+|.+|++++.++|+|
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRW-FELPIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHH-HHcccccccCchHHHHHHHHHhCCCC
Confidence 88654 34444568999999999999999985
No 61
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.63 E-value=1.2e-15 Score=99.18 Aligned_cols=72 Identities=26% Similarity=0.328 Sum_probs=61.7
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeC----CeeechHHHHHHHHHhh
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDG----DVVVSDSYAILLYLEEK 97 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~----g~~l~es~~I~~yL~~~ 97 (233)
+++||++..||+|++++++|.++|++|+.+.++... .++ .+.+|.+++|+|+++ |.+++||.+|++||++.
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~ 75 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTY 75 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHH
Confidence 589999999999999999999999999999876431 222 356899999999944 78999999999999987
Q ss_pred C
Q 026781 98 Y 98 (233)
Q Consensus 98 ~ 98 (233)
.
T Consensus 76 ~ 76 (77)
T cd03040 76 L 76 (77)
T ss_pred c
Confidence 5
No 62
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=2.8e-15 Score=108.01 Aligned_cols=186 Identities=18% Similarity=0.245 Sum_probs=128.5
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCC
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQR 101 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~ 101 (233)
|+||-|..||||-|+|+++.++|+|++.+...-.+.+. +. ++-...+||+|+ +||..+.||..|++|+++..+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~T--p~--rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEET--PI--RMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccC--hh--hhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 57999999999999999999999999998876443211 11 112345899999 99999999999999999988753
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHH-------------HHHHh-ccCch-------HHHHHHHHHHHHHHH
Q 026781 102 ALLPAADPQQRALNLQAASIISSSMQPLHMLSLL-------------KYIED-KFGPD-------ERLLWVQTHIEKGFL 160 (233)
Q Consensus 102 ~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~~~-------~~~~~~~~~~~~~l~ 160 (233)
-+..+ -+..++.|+....+....+..+++. +++.. +.... .....+.+++...++
T Consensus 77 ~lt~~----~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~ 152 (215)
T COG2999 77 LLTGK----VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLR 152 (215)
T ss_pred hhccC----cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHH
Confidence 23333 3444556665555444333333222 11111 11111 113566788888899
Q ss_pred HHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhh
Q 026781 161 ALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFL 221 (233)
Q Consensus 161 ~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 221 (233)
.|+.++.. ..-+-| .+++-||.+|+.|+.+....+..|. .++..|..++.+...+.
T Consensus 153 ~l~~Li~~--~s~~n~-~l~~ddi~vFplLRnlt~v~gi~wp--s~v~dy~~~msektqV~ 208 (215)
T COG2999 153 ALDKLIVG--PSAVNG-ELSEDDILVFPLLRNLTLVAGIQWP--SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHhcC--cchhcc-ccchhhhhhhHHhccceecccCCCc--HHHHHHHHHHHHhhCcc
Confidence 99999876 343445 6999999999999999666566554 57999999998866554
No 63
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.63 E-value=4.1e-15 Score=104.78 Aligned_cols=110 Identities=19% Similarity=0.274 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhccchhHHHH-HHHHHHhc-------cCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeec
Q 026781 105 PAADPQQRALNLQAASIISSSMQPLHMLS-LLKYIEDK-------FGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATG 176 (233)
Q Consensus 105 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G 176 (233)
|. ++.+++++++|+.+....+.+.+... +....... ...+...+.....+.+.++.||++|++ ++|++|
T Consensus 2 ~~-~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G 78 (119)
T cd03189 2 PP-DTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAK--KGYFVG 78 (119)
T ss_pred CC-CHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHcc--CCCCCC
Confidence 45 88999999999999988887754322 12111110 012334556778899999999999987 799999
Q ss_pred CCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCCh
Q 026781 177 EDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLP 218 (233)
Q Consensus 177 ~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p 218 (233)
+++|+|||++++.+.++ ...+.....||+|.+|++++.++|
T Consensus 79 d~~t~ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 79 DKLTAADIMMSFPLEAA-LARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCCCHHHHHHHHHHHHH-HHcCcccccCchHHHHHHHHhcCC
Confidence 99999999999999888 555545689999999999999987
No 64
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.63 E-value=4.2e-15 Score=114.59 Aligned_cols=189 Identities=15% Similarity=0.142 Sum_probs=121.3
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCC
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQ 100 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~ 100 (233)
-+++||.|..||||-++|.+|.+.|++|+++.|++-. ..-.+-+-+.+||+|..+|+.+.||.+|+.-|..-...
T Consensus 89 L~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~-----r~eIk~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~ 163 (370)
T KOG3029|consen 89 LDLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVL-----RQEIKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQD 163 (370)
T ss_pred ceEEEEeeccCchHHHHHHHHhhcCCceEEEEecchh-----hhhccccccccccEEEeccceechhHHHHHHHHHHhcc
Confidence 4799999999999999999999999999999998652 11122346789999997677799999998877331100
Q ss_pred --------CCCCC------------------------CC----CHHHHHHHHHHHHHHHhccchhHHHHHHHH-------
Q 026781 101 --------RALLP------------------------AA----DPQQRALNLQAASIISSSMQPLHMLSLLKY------- 137 (233)
Q Consensus 101 --------~~l~p------------------------~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------- 137 (233)
..++| +. +...+...+.|-.|.++.+--++.+.+++.
T Consensus 164 ~~q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~Eslet 243 (370)
T KOG3029|consen 164 KRQDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLET 243 (370)
T ss_pred CCCCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHH
Confidence 01222 10 111222344555555444322222211110
Q ss_pred ---H-----------------------------HhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHh
Q 026781 138 ---I-----------------------------EDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVF 185 (233)
Q Consensus 138 ---~-----------------------------~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~ 185 (233)
+ .+...........++.+..+++.+-..|+. .++|+.|++|++||+.
T Consensus 244 Fewf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgk-nr~flGG~kPnLaDLs 322 (370)
T KOG3029|consen 244 FEWFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGK-NRPFLGGKKPNLADLS 322 (370)
T ss_pred HHHHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCC-CCCccCCCCCchhhhh
Confidence 0 000001111222566777777777777753 3899999999999999
Q ss_pred hhhHHHHHHHHhCC--CCCCCchHHHHHHHhhC
Q 026781 186 LAPQIAVVTMRFNI--DMSKFPTLLRIYESYKG 216 (233)
Q Consensus 186 ~~~~l~~~~~~~~~--~~~~~p~l~~~~~~~~~ 216 (233)
+|+++..+ ..... +.-...++..||-+|++
T Consensus 323 vfGvl~sm-~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 323 VFGVLRSM-EGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhhhhHh-hhhhHHHHHHhcchHHHHHHHHHH
Confidence 99999988 54432 23456789999999876
No 65
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.63 E-value=2.9e-15 Score=105.34 Aligned_cols=111 Identities=16% Similarity=0.150 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHH-HHHHh---ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhh
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLL-KYIED---KFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFL 186 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~ 186 (233)
+++++.+|+.+....+.+....... ..+.. ....+...+...+.+.+.++.||++|++ ++|++|+++|+|||++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l 79 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSK--SKYLAGDSFTLADLSH 79 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHccc--CcccCCCCccHHHHHH
Confidence 5788999999988888765433211 12211 1233445566788999999999999987 7999999999999999
Q ss_pred hhHHHHHHHHhCC--CCCCCchHHHHHHHhhCChhhhhhC
Q 026781 187 APQIAVVTMRFNI--DMSKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 187 ~~~l~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
++++.+. ...+. ..+.||+|.+|++++.++|++++++
T Consensus 80 ~~~~~~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 80 LPYLQYL-MATPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHH-HHccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 9998887 32222 3478999999999999999999875
No 66
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.63 E-value=5.3e-15 Score=104.80 Aligned_cols=115 Identities=21% Similarity=0.283 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQI 190 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l 190 (233)
+++++++|+.+..+.+.+.+...+..............+...+++.+.++.||+.|+. ++|++|+++|+|||++++.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~siaDi~l~~~~ 78 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLK--RTYLVGERLTLADIFVAGAL 78 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHcc--CceeccCCccHHHHHHHHHH
Confidence 3678999999998888876554433322112223445678889999999999999987 78999999999999999999
Q ss_pred HHHHHHhCCC---CCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 191 AVVTMRFNID---MSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 191 ~~~~~~~~~~---~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
.+. .....+ +..+|++.+|++++.++|++++++++.+
T Consensus 79 ~~~-~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 79 LLG-FTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHH-HHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 887 333222 3689999999999999999999988764
No 67
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.62 E-value=2e-15 Score=96.94 Aligned_cols=68 Identities=40% Similarity=0.418 Sum_probs=61.0
Q ss_pred eeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 27 SYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 27 ~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
+...|+++++++++|+++|++|+.+.++...+ ...+++.+.||+|++|+|+++|..++||.+|++||.
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 35679999999999999999999999987654 356889999999999999999999999999999984
No 68
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.62 E-value=4e-15 Score=105.69 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQI 190 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l 190 (233)
++++.+.|++++...+.+.. ..+.. ++..+...+.+.+.++.||+.|++++++|++|+++|+|||++++++
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~ 72 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFY-----KLLGA----PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWF 72 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHH-----HHHhc----cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHH
Confidence 58889999999875544432 22222 3345677889999999999999864579999999999999999999
Q ss_pred HHHHHHhC------CCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 191 AVVTMRFN------IDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 191 ~~~~~~~~------~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
.++ ...+ ...+.||+|.+|++++.++|++++++....
T Consensus 73 ~~~-~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 73 ERL-EALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHH-HHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 877 3332 346889999999999999999999988653
No 69
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.61 E-value=6.5e-15 Score=103.43 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHH--h----ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccH
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIE--D----KFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYM 181 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ 181 (233)
|+.+++++++|+.+....+.+.+...+..... . ....+...+...+++.+.+..||+.|++ ++|++||++|+
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~gd~~t~ 78 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAG--SPYVAGDRFTI 78 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCH
Confidence 46789999999999887776644433221110 0 1223555778889999999999999987 78999999999
Q ss_pred hHHhhhhHHHHHHHHhCCCC-CCCchHHHHHHHhhCChhh
Q 026781 182 ADVFLAPQIAVVTMRFNIDM-SKFPTLLRIYESYKGLPEF 220 (233)
Q Consensus 182 ADi~~~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~ 220 (233)
|||++++.+.++ ...+.++ ..||+|.+|++++.++|++
T Consensus 79 aDi~l~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 79 ADITAFVGLDFA-KVVKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHhHHH-HhcCCCCccccHHHHHHHHHHHhccCC
Confidence 999999999888 5566655 6899999999999999974
No 70
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.61 E-value=6.6e-15 Score=106.22 Aligned_cols=116 Identities=21% Similarity=0.193 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchH-HHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDE-RLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
.+++.++++++.+.+.....+...+ ......++ ..+...+.+.+.|+.||+.|++++++|++|+++|+||+++++
T Consensus 2 ~e~a~iD~i~~~v~D~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~ 77 (137)
T cd03208 2 KERALIDMYVEGTADLMEMILMLPF----LPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLE 77 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcc----CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHH
Confidence 3577788887777665544321111 11111111 124444567899999999998444789999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCCCCC
Q 026781 189 QIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPERQP 229 (233)
Q Consensus 189 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 229 (233)
.+.++....+..+..||+|.+|++++.++|+++++++....
T Consensus 78 ~l~~~~~~~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~ 118 (137)
T cd03208 78 AILMVEELDPSLLSDFPLLQAFKTRISNLPTIKKFLQPGSP 118 (137)
T ss_pred HHHHHHHhchhhhccChHHHHHHHHHHcCHHHHHHHhcCCC
Confidence 99988322233468999999999999999999999986553
No 71
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=8.8e-15 Score=112.67 Aligned_cols=195 Identities=21% Similarity=0.290 Sum_probs=139.3
Q ss_pred CCCCceEEeeeCCChhhHHHHHHHHHcCCC--ceEEEeecC--C-CCCCChh------------------hhhcCC----
Q 026781 18 SSSSKLVLYSYWQSSCSWRVRFALKLKGLI--YEYKAVDLS--K-GEQFSPE------------------FEELNP---- 70 (233)
Q Consensus 18 ~~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~--~~~~~~~~~--~-~~~~~~~------------------~~~~~p---- 70 (233)
....+..||....||++.|..+.=+++|++ ..+..+.+. + |....++ |....|
T Consensus 47 ~e~GRYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~Ysg 126 (324)
T COG0435 47 AEKGRYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSG 126 (324)
T ss_pred CCCCeEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCC
Confidence 356789999999999999999999999985 222222221 1 1111111 111222
Q ss_pred CCCcceEEeCC---eeechHHHHHHHHHhhCCC-----CCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcc
Q 026781 71 LHFVPVLVDGD---VVVSDSYAILLYLEEKYPQ-----RALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKF 142 (233)
Q Consensus 71 ~g~~P~L~~~g---~~l~es~~I~~yL~~~~~~-----~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (233)
.-+||||.|.. -+-.||..|++-+...+.+ ..|+|. ..+.+++.+.+++...+-. -+++. ...
T Consensus 127 RvTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~---~Lr~eId~~n~~Iy~~vNN----GVYk~--GFA 197 (324)
T COG0435 127 RVTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPE---ALRTEIDELNKWIYDTVNN----GVYKA--GFA 197 (324)
T ss_pred ceeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCH---HHHHHHHHHHhhhcccccC----ceeee--ccc
Confidence 23799999653 3458999999999876642 348888 6677777777766554422 22222 122
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHh--C-----C-CCCCCchHHHHHHHh
Q 026781 143 GPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRF--N-----I-DMSKFPTLLRIYESY 214 (233)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~--~-----~-~~~~~p~l~~~~~~~ 214 (233)
..++..++.-+.+-+.|+.||+.|++ +.|++||++|.||+-+|+.|-++ ..+ + . ....||+|..|...+
T Consensus 198 ~tq~aYeea~~~lF~~Ld~lE~~L~~--~ryl~Gd~lTEAD~RLftTlvRF-D~VYvgHFKCN~~rI~dypnL~~yLr~L 274 (324)
T COG0435 198 TTQEAYEEAVKKLFEALDKLEQILSE--RRYLTGDQLTEADIRLFTTLVRF-DPVYVGHFKCNLRRIRDYPNLWGYLRDL 274 (324)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhc--CeeeccccchHhhhhhhheeEee-cceEEeeeecccchhhcCchHHHHHHHH
Confidence 35667788888899999999999999 89999999999999999998877 322 1 1 246799999999999
Q ss_pred hCChhhhhhC
Q 026781 215 KGLPEFLASS 224 (233)
Q Consensus 215 ~~~p~~~~~~ 224 (233)
.+.|+|.++.
T Consensus 275 Yq~pg~~~T~ 284 (324)
T COG0435 275 YQLPGFAETV 284 (324)
T ss_pred hcCccccccc
Confidence 9999999875
No 72
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.61 E-value=6.4e-15 Score=104.84 Aligned_cols=110 Identities=19% Similarity=0.172 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhH
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQ 189 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~ 189 (233)
.+++++++|+.+....+.+.+...+ .. .++..+...+.+.+.++.||+.|++ ++|++|+++|+|||++++.
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~ADi~l~~~ 72 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVL----AA---KGEEREKAKEEALEALKVLEEELGG--KPFFGGDTIGYVDIALGSF 72 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH----cc---chHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCcchHHHHHHHH
Confidence 4689999999999887766543321 11 1344566788999999999999987 7999999999999999999
Q ss_pred HHHHHHH---hCC---CCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 190 IAVVTMR---FNI---DMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 190 l~~~~~~---~~~---~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
+.++... .+. ..+.||++.+|++++.++|+++++++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 117 (126)
T cd03185 73 LGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRD 117 (126)
T ss_pred HHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHH
Confidence 8887211 132 24789999999999999999999987653
No 73
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.59 E-value=1.4e-14 Score=105.30 Aligned_cols=109 Identities=15% Similarity=0.098 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhH
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQ 189 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~ 189 (233)
..++++++|++|....+.+.+.. ... ...++..+...+.+.+.|+.||+.|++ ++|++|+++|+|||++++.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~l~~~l~~LE~~L~~--~~yl~Gd~~TlADi~l~~~ 74 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYK----AGF--ATTQEAYDEAVDELFEALDRLEELLSD--RRYLLGDRLTEADIRLFTT 74 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHH----Hhh--ccCHHHHHHHHHHHHHHHHHHHHHHcc--CCeeeCCCccHHHHHHHHH
Confidence 56888999999999887664321 211 234556677888999999999999987 8999999999999999999
Q ss_pred HHHHHHHh----C---CCCCCCchHHHHHHHhhCChhhhhhCCC
Q 026781 190 IAVVTMRF----N---IDMSKFPTLLRIYESYKGLPEFLASSPE 226 (233)
Q Consensus 190 l~~~~~~~----~---~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 226 (233)
+.++.... . ..+.+||+|.+|++++.++|++++++..
T Consensus 75 l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 75 LIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 87662111 1 1246899999999999999999998764
No 74
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.59 E-value=1.3e-14 Score=103.31 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhc-CCceeecCCccHhHHhhhh
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDF-AAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~t~ADi~~~~ 188 (233)
.+++.++++++.+.+.......... . ..+...+...+.+.+.+..||+.|+++ +++|++|+++|+||+++++
T Consensus 2 ~e~~~vd~~~~~~~d~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~ 74 (126)
T cd03210 2 KEAALIDMVNDGVEDLRLKYVRMIY-----Q--NYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFD 74 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-----C--cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHH
Confidence 3567777777766654433221111 1 112334566777999999999999864 4689999999999999999
Q ss_pred HHHHHHHHh-CCCCCCCchHHHHHHHhhCChhhhhhCCCCC
Q 026781 189 QIAVVTMRF-NIDMSKFPTLLRIYESYKGLPEFLASSPERQ 228 (233)
Q Consensus 189 ~l~~~~~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 228 (233)
.+.++ ... +..+..||+|.+|++++.++|+++++++.+.
T Consensus 75 ~~~~~-~~~~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 75 LLDIH-LVLAPGCLDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred HHHHH-HHhChHhhhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 99888 432 3346899999999999999999999987764
No 75
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.58 E-value=9.9e-15 Score=92.55 Aligned_cols=71 Identities=55% Similarity=0.755 Sum_probs=62.7
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++||+++.||+|++++++|+++|++|+.+.++..... ..++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999999998865422 2257889999999999988999999999999984
No 76
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.58 E-value=1.5e-14 Score=102.34 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQI 190 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l 190 (233)
++++++++++.+.+.........+ .. ..+...+...+.+.+.+..||+.|++ ++|++|+++|+||+++++.+
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~T~aDi~l~~~~ 73 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICY-----SP-DFEKLKPDYLAKLPDKLKLFSDFLGD--RPWFAGDKITYVDFLLYEAL 73 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhc-----Cc-chHHHHHHHHHHHHHHHHHHHHHhCC--CCCcCCCCccHHHHHHHHHH
Confidence 467788887777665433221111 11 12344566788899999999999986 78999999999999999999
Q ss_pred HHHHHHhC-CCCCCCchHHHHHHHhhCChhhhhhCCCCCC
Q 026781 191 AVVTMRFN-IDMSKFPTLLRIYESYKGLPEFLASSPERQP 229 (233)
Q Consensus 191 ~~~~~~~~-~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 229 (233)
.++ .... ..+..||+|.+|++++.++|+++++++.+..
T Consensus 74 ~~~-~~~~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~ 112 (121)
T cd03209 74 DQH-RIFEPDCLDAFPNLKDFLERFEALPKISAYMKSDRF 112 (121)
T ss_pred HHH-HHhCccccccChHHHHHHHHHHHCHHHHHHHhcccC
Confidence 888 4432 3368999999999999999999999988743
No 77
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.3e-14 Score=109.37 Aligned_cols=197 Identities=20% Similarity=0.220 Sum_probs=134.4
Q ss_pred CCCceEEeeeCCChhhHHHHHHHHHcCCCc--eEEEeec-C--CCCCCCh---------------h-----------hhh
Q 026781 19 SSSKLVLYSYWQSSCSWRVRFALKLKGLIY--EYKAVDL-S--KGEQFSP---------------E-----------FEE 67 (233)
Q Consensus 19 ~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~--~~~~~~~-~--~~~~~~~---------------~-----------~~~ 67 (233)
+..+..||....|||+.|+.+.++++|++- ....+.+ . .|....+ + |..
T Consensus 34 akgryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~ 113 (319)
T KOG2903|consen 34 AKGRYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYI 113 (319)
T ss_pred CCceEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhh
Confidence 347899999999999999999999999852 2222222 1 0111111 0 111
Q ss_pred cCCC----CCcceEEeCC---eeechHHHHHHHHHhhC---------CCCCCCCCCCHHHHHHHHHHHHHHHhccchhHH
Q 026781 68 LNPL----HFVPVLVDGD---VVVSDSYAILLYLEEKY---------PQRALLPAADPQQRALNLQAASIISSSMQPLHM 131 (233)
Q Consensus 68 ~~p~----g~~P~L~~~g---~~l~es~~I~~yL~~~~---------~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 131 (233)
.+|. -+||||-|-. .+-.||..|++.+...+ +.-.|+|. ..+++++.+-+|....+-.
T Consensus 114 ~~p~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~---~L~~~Ide~N~wvy~~INN--- 187 (319)
T KOG2903|consen 114 ASPNYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPS---SLRAQIDETNSWVYDKINN--- 187 (319)
T ss_pred cCCCCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCH---HHHHHHhhhhceecccccC---
Confidence 1222 2799999653 45689999999999333 22346777 6677777777666554422
Q ss_pred HHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCC-------CC-CC
Q 026781 132 LSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNI-------DM-SK 203 (233)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~-------~~-~~ 203 (233)
-+++... ...++..+.....+-+.|+.+|+.|+++-+.|++|+++|.|||-+++.+.++-.+... .+ ..
T Consensus 188 -GVYk~GF--A~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~ 264 (319)
T KOG2903|consen 188 -GVYKCGF--AEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDE 264 (319)
T ss_pred -ceeeecc--ccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhcc
Confidence 2232211 1245666777788889999999999984345999999999999999998777222211 12 59
Q ss_pred CchHHHHHHHhhC-ChhhhhhC
Q 026781 204 FPTLLRIYESYKG-LPEFLASS 224 (233)
Q Consensus 204 ~p~l~~~~~~~~~-~p~~~~~~ 224 (233)
||+|..|.+++.. .|+|+.+.
T Consensus 265 Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 265 YPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred CcHHHHHHHHHHhhccchhhcc
Confidence 9999999999999 99998765
No 78
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.55 E-value=3.3e-14 Score=101.21 Aligned_cols=111 Identities=15% Similarity=0.142 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHH-----HHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhh
Q 026781 112 RALNLQAASIISSSMQPLHMLSLLK-----YIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFL 186 (233)
Q Consensus 112 ~a~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~ 186 (233)
++++++|+.+....+.+.+...... .+......+...+...+.+.+.++.+|++|.+ +++|++|+++|+|||++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~~l~Gd~~t~ADi~l 80 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLK-DKPFLAGDEISIADLSA 80 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHH
Confidence 5677888888877776543221111 11112224555677888999999999998533 26899999999999999
Q ss_pred hhHHHHHHHHhCCC-CCCCchHHHHHHHhhC--ChhhhhhC
Q 026781 187 APQIAVVTMRFNID-MSKFPTLLRIYESYKG--LPEFLASS 224 (233)
Q Consensus 187 ~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~--~p~~~~~~ 224 (233)
++.+.+. ...+.+ +..||+|.+|++++.+ ||++++++
T Consensus 81 ~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 81 VCEIMQP-EAAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHH-HhcCCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 9988777 555654 4899999999999999 99999865
No 79
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.55 E-value=3e-13 Score=99.87 Aligned_cols=174 Identities=18% Similarity=0.219 Sum_probs=131.9
Q ss_pred CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCCCCCCCCCCCH
Q 026781 30 QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAADP 109 (233)
Q Consensus 30 ~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~ 109 (233)
...-|..|..+|+.+++||.++..+ +.+| ++|.|++|.|..+...++|-.+|+.+..++.- .|-...+.
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~-------Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE 101 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRA-------NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSE 101 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecC-------Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhh
Confidence 3456899999999999999988643 3444 67999999999999999999999999999863 24333356
Q ss_pred HHHHHHHHHHHHHHhccchhHHHH--------------------------H---------HHHHHhccCchHHHHHHHHH
Q 026781 110 QQRALNLQAASIISSSMQPLHMLS--------------------------L---------LKYIEDKFGPDERLLWVQTH 154 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~--------------------------~---------~~~~~~~~~~~~~~~~~~~~ 154 (233)
.+++.++..++..+..+..+-... + .+.+....+++...+.+.+.
T Consensus 102 ~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~ 181 (257)
T KOG3027|consen 102 DQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQ 181 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHH
Confidence 788888888776665542210000 0 01112233445557889999
Q ss_pred HHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC-------CCCCchHHHHHHHhhCC
Q 026781 155 IEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID-------MSKFPTLLRIYESYKGL 217 (233)
Q Consensus 155 ~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~-------~~~~p~l~~~~~~~~~~ 217 (233)
+.++++.|+..|++ ++||.|++||-+|..+|+.+..++ ....+ +.+|++|.++++|+++.
T Consensus 182 vdkc~~aLsa~L~~--q~yf~g~~P~elDAlvFGHlytil-Tt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 182 VDKCCRALSAQLGS--QPYFTGDQPTELDALVFGHLYTIL-TTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHhcC--CCccCCCCccHHHHHHHhhhHHhh-hhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999998 999999999999999999998883 33222 48899999999999863
No 80
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.55 E-value=3.9e-14 Score=100.68 Aligned_cols=83 Identities=19% Similarity=0.279 Sum_probs=70.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhh--------------cCCceeecCCccHhHHhhhhHHHHHHHH-----hCCCC-CC
Q 026781 144 PDERLLWVQTHIEKGFLALEKLLID--------------FAAKYATGEDVYMADVFLAPQIAVVTMR-----FNIDM-SK 203 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~le~~L~~--------------~~~~~l~G~~~t~ADi~~~~~l~~~~~~-----~~~~~-~~ 203 (233)
+++..+...+++.+.|+.||.+|++ .+++|++|+++|+|||.+++.+.++ .. .+..+ +.
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~-~~~~~~~~g~~i~~~ 101 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIV-KVVAKKYRNFEIPAD 101 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHhhcCCCcccc
Confidence 3455678889999999999999986 2368999999999999999998876 32 25554 88
Q ss_pred CchHHHHHHHhhCChhhhhhCCCC
Q 026781 204 FPTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 204 ~p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
||+|.+|++++.+||+|+++++..
T Consensus 102 ~P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 102 LTGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred CHHHHHHHHHHHCCHHHHHHcCCH
Confidence 999999999999999999998765
No 81
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=2.1e-14 Score=100.44 Aligned_cols=111 Identities=19% Similarity=0.051 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHH-HHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 110 QQRALNLQAASIISSSMQPLHMLSL-LKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 110 ~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
.++++.+.|+.++.+.+.+...... ...+.. ...+...+...+.+.+.+..+|..|+. +++||+| ++|+||+++++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSiAD~~l~~ 78 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPP-GAANLFG-EWCIADTDLAL 78 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCcccC-CccHHHHHHHH
Confidence 5789999999999999887521111 110111 111234567788889999999999974 3589999 59999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCCC
Q 026781 189 QIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSPE 226 (233)
Q Consensus 189 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 226 (233)
++.+. ...+.+++ |++.+|++|+.+||+|+++++.
T Consensus 79 ~~~~~-~~~g~~l~--p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 79 MLNRL-VLNGDPVP--ERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHhc
Confidence 99999 77788775 9999999999999999998754
No 82
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=2.2e-14 Score=98.51 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=76.6
Q ss_pred HHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHH
Q 026781 117 QAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMR 196 (233)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~ 196 (233)
+|+.+..+.+.+.+...+. .. .++..+...+++.+.++.||..|++ ++|++|+++|+|||++++.+.+. ..
T Consensus 3 ~w~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~g~~~t~aDi~~~~~~~~~-~~ 73 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAM----GI--EEPARMAGFGSYDDVLAALEQALAK--GPYLLGERFTAADVLVGSPLGWG-LQ 73 (103)
T ss_pred eeeeeccccccHHHHHHHc----CC--CcchhhhhhhhHHHHHHHHHHHHcc--CCcccCCccCHHHHHHHHHHHHH-HH
Confidence 3445555555554332211 11 2334566778899999999999987 78999999999999999999998 44
Q ss_pred hCCCCCCCchHHHHHHHhhCChhhhhhCCC
Q 026781 197 FNIDMSKFPTLLRIYESYKGLPEFLASSPE 226 (233)
Q Consensus 197 ~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 226 (233)
.+. ...+|+|.+|++++.++|++++++.+
T Consensus 74 ~~~-~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 74 FGL-LPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred cCC-CCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 443 57899999999999999999998765
No 83
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.53 E-value=5.1e-14 Score=90.14 Aligned_cols=64 Identities=27% Similarity=0.307 Sum_probs=56.4
Q ss_pred EEeeeC-------CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 24 VLYSYW-------QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 24 ~Ly~~~-------~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
.||.++ .||+|++++++|+++|++|+.+.++.. ..+|.|++|+|+++|..+.||.+|++||++
T Consensus 2 ~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~ 71 (72)
T cd03054 2 ELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLKK 71 (72)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHhh
Confidence 566665 899999999999999999999988642 167999999999999999999999999987
Q ss_pred h
Q 026781 97 K 97 (233)
Q Consensus 97 ~ 97 (233)
+
T Consensus 72 ~ 72 (72)
T cd03054 72 K 72 (72)
T ss_pred C
Confidence 4
No 84
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.49 E-value=1.1e-13 Score=94.42 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=73.2
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHH
Q 026781 116 LQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTM 195 (233)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~ 195 (233)
++|+.+..+.+.+............ .....+...+.+.+.++.+|+.|++ ++|++|+++|+||+++++++.+. .
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~~~~~-~ 75 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFG---APLDKETAIARAHRLLRLLEEHLAG--RDWLAGDRPTIADVAVYPYVALA-P 75 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhC---CHhHHHHHHHHHHHHHHHHHHHHcc--CCccCCCCCCHHHHHHHHHHHHH-h
Confidence 4567777776654322222111111 1223456788999999999999987 78999999999999999988765 4
Q ss_pred HhCCCCCCCchHHHHHHHhhCChhh
Q 026781 196 RFNIDMSKFPTLLRIYESYKGLPEF 220 (233)
Q Consensus 196 ~~~~~~~~~p~l~~~~~~~~~~p~~ 220 (233)
..+..+++||+|.+|++++.++|++
T Consensus 76 ~~~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 76 EGGVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred ccCCChhhCcHHHHHHHHHHhCcCC
Confidence 4455568999999999999999975
No 85
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.48 E-value=1.9e-13 Score=92.35 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=75.0
Q ss_pred HHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 026781 91 LLYLEEKYPQRALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFA 170 (233)
Q Consensus 91 ~~yL~~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 170 (233)
+|||.+.. .++|+ +..+.+++++|++.....+. ....+.+.+.++.+|++|++
T Consensus 1 ~r~~~~~~---~~~~~-~~~~~~~vd~~~d~~~~~l~---------------------~~~~~~~~~~l~~le~~L~~-- 53 (96)
T cd03200 1 ARFLYRLL---GPAPN-APNAATNIDSWVDTAIFQLA---------------------EGSSKEKAAVLRALNSALGR-- 53 (96)
T ss_pred CchHHHHh---cccCC-CchHHHHHHHHHHHHHHHHh---------------------cCCHHHHHHHHHHHHHHHcC--
Confidence 47888883 39999 99999999999996543221 01234455778889999987
Q ss_pred CceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCC
Q 026781 171 AKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGL 217 (233)
Q Consensus 171 ~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~ 217 (233)
++|++|+++|+|||++++.+.+. +.....||+|.+|++|+.++
T Consensus 54 ~~fl~Gd~~tiADi~l~~~l~~~----~~~~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 54 SPWLVGSEFTVADIVSWCALLQT----GLASAAPANVQRWLKSCENL 96 (96)
T ss_pred CCccCCCCCCHHHHHHHHHHHHc----ccccccChHHHHHHHHHHhC
Confidence 89999999999999999987653 33347899999999999763
No 86
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.48 E-value=2.5e-13 Score=91.67 Aligned_cols=72 Identities=28% Similarity=0.429 Sum_probs=63.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCC--CCCchHHHHHHHhhCCh
Q 026781 144 PDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDM--SKFPTLLRIYESYKGLP 218 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~--~~~p~l~~~~~~~~~~p 218 (233)
.++..+.....+.+.|..+|+.|++ ++|++|+++|+||+++++.+.+. ...+... ++||+|.+|++++.+||
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~ADi~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKG--GPYLVGDKLTIADIALFPMLDWL-ERLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--SSSSSBSS-CHHHHHHHHHHHHH-HHHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcC--CCeeeccCCchhHHHHHHHHHHH-HHhCCCcccccCHHHHHHHHHHHcCC
Confidence 3445778899999999999999996 99999999999999999999999 6665554 89999999999999998
No 87
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.46 E-value=1.1e-12 Score=92.50 Aligned_cols=106 Identities=16% Similarity=0.246 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhh-cCCceeecCCccHhHHhh
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLID-FAAKYATGEDVYMADVFL 186 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~t~ADi~~ 186 (233)
|+..++.+++++.+... +. ...+...+.. .. .+.+.+.++.||+.|+. .+++|++| ++|+|||++
T Consensus 1 d~~~ra~~~~~~~~~~~-~~---~~~~~~~~~~----~~-----~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l 66 (120)
T cd03203 1 DPAKREFADELLAYTDA-FT---KALYSSLIKG----DP-----SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAY 66 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HH---HHHHHHHhcC----Cc-----hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHH
Confidence 46789999999988211 11 1111112111 11 22346677888888873 13799999 999999999
Q ss_pred hhHHHHHHH----HhCCCC-CCCchHHHHHHHhhCChhhhhhCCCC
Q 026781 187 APQIAVVTM----RFNIDM-SKFPTLLRIYESYKGLPEFLASSPER 227 (233)
Q Consensus 187 ~~~l~~~~~----~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~~~~ 227 (233)
++++.++.. ..+.++ ++||+|.+|++++.++|+++++.+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 67 VPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 999876621 134554 68999999999999999999998864
No 88
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.44 E-value=1.8e-13 Score=94.08 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHH--HHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhh
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLL--KYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAP 188 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 188 (233)
+++++++|+.+..+.+.+.+..... .+.......++..+...+++.+.++.||..|++ ++|++|+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAG--RDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CccccCCCCCHHHHHHHH
Confidence 5789999999988887765332111 111123334556778899999999999999976 789999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHhh
Q 026781 189 QIAVVTMRFNIDMSKFPTLLRIYESYK 215 (233)
Q Consensus 189 ~l~~~~~~~~~~~~~~p~l~~~~~~~~ 215 (233)
.+.++ ...+.+..+||+|.+|++++.
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVA-DEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHhc-cccCCChHhCccHHHHHHhhC
Confidence 99988 555666688999999999874
No 89
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.43 E-value=7.5e-13 Score=91.24 Aligned_cols=76 Identities=18% Similarity=0.173 Sum_probs=63.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcC--------CceeecCCccHhHHhhhhHHHHHHHHhCCCC-----CCCchHHHH
Q 026781 144 PDERLLWVQTHIEKGFLALEKLLIDFA--------AKYATGEDVYMADVFLAPQIAVVTMRFNIDM-----SKFPTLLRI 210 (233)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~le~~L~~~~--------~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~-----~~~p~l~~~ 210 (233)
+.+..+.....+.+.++.||.+|.++. ++|++|+++|+|||++++.+.++ ...+.+. ..||+|.+|
T Consensus 23 ~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~-~~~~~~~~~~~~~~~P~l~~w 101 (111)
T cd03204 23 NVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRL-KFLGLSRRYWGNGKRPNLEAY 101 (111)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHH-HHcCccccccccccChHHHHH
Confidence 344567888999999999999998621 25999999999999999999998 5555443 589999999
Q ss_pred HHHhhCChhh
Q 026781 211 YESYKGLPEF 220 (233)
Q Consensus 211 ~~~~~~~p~~ 220 (233)
++|+.+||+|
T Consensus 102 ~~rv~aRpsf 111 (111)
T cd03204 102 FERVLQRESF 111 (111)
T ss_pred HHHHHcCCCC
Confidence 9999999986
No 90
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.43 E-value=4.6e-13 Score=93.55 Aligned_cols=75 Identities=17% Similarity=0.233 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCC
Q 026781 147 RLLWVQTHIEKGFLALEKLLIDF-AAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSP 225 (233)
Q Consensus 147 ~~~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 225 (233)
..+...+.+.+.++.+|..|+.. +++|++|+ +|+||+++++.+.+. ...+.+. .|+|.+|++++.++|+++++++
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~-~~~~~~~--~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRF-RTYGLPL--SPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHH-HHcCCCC--CHHHHHHHHHHHCCHHHHHHHh
Confidence 34566677778888888877532 37899999 999999999999988 5555543 3999999999999999999875
No 91
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.40 E-value=2.2e-12 Score=91.03 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHh----CCC-CCCCchHHHHHHHhhCChhhhhh
Q 026781 149 LWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRF----NID-MSKFPTLLRIYESYKGLPEFLAS 223 (233)
Q Consensus 149 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~~~~ 223 (233)
+...+.+.+.+..||..|++. ++|++||++|+|||++++.+.++.... +.. .+.||+|.+|++++.+||+|+++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~-~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t 107 (121)
T cd03201 29 DGTEQALLDELEALEDHLKEN-GPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhc
Confidence 445677999999999999842 689999999999999999877662221 232 37999999999999999999999
Q ss_pred CCCC
Q 026781 224 SPER 227 (233)
Q Consensus 224 ~~~~ 227 (233)
++..
T Consensus 108 ~~~~ 111 (121)
T cd03201 108 KAEK 111 (121)
T ss_pred CCCH
Confidence 8764
No 92
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.35 E-value=4.7e-12 Score=80.25 Aligned_cols=65 Identities=26% Similarity=0.377 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC---CCCCchHHHHHHH
Q 026781 146 ERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID---MSKFPTLLRIYES 213 (233)
Q Consensus 146 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~---~~~~p~l~~~~~~ 213 (233)
...+...+.+.+.++.||+.|+. ++|++|++||+|||++++++.++ ...+.. .+.||+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~l~~~l~~~-~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLAD--GPFLFGDRPSLADIALAPFLWRL-RFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--SSBTTBSS--HHHHHHHHHHHHH-HHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--CCCCCCCCCCHHHHHHHHHHHHH-HHhCcCcCccccCHHHHHHHhC
Confidence 34677889999999999999998 78999999999999999999999 555432 3899999999987
No 93
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.35 E-value=2.8e-10 Score=89.80 Aligned_cols=174 Identities=20% Similarity=0.227 Sum_probs=127.0
Q ss_pred CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE-eCCeeechHHHHHHHHHhhCCCCCCCCCCC
Q 026781 30 QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV-DGDVVVSDSYAILLYLEEKYPQRALLPAAD 108 (233)
Q Consensus 30 ~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~ 108 (233)
.++-|.++.+++++++-+.++...+ ++| .+|.|++|+|+ ++|..+++-..|+.||.....+-.+-+...
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ss-------N~~---~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~ 85 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSS-------NPW---RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLS 85 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeec-------CCC---CCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHH
Confidence 4688999999999999666665543 233 35889999999 668999999999999988432222333323
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHH-----------HHH-------------------------HhccCchHHHHHHH
Q 026781 109 PQQRALNLQAASIISSSMQPLHMLSLL-----------KYI-------------------------EDKFGPDERLLWVQ 152 (233)
Q Consensus 109 ~~~~a~~~~~~~~~~~~~~~~~~~~~~-----------~~~-------------------------~~~~~~~~~~~~~~ 152 (233)
..+.+....|+.++...+.+++..-++ +.+ ..........+...
T Consensus 86 ~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~ 165 (313)
T KOG3028|consen 86 AKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIY 165 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHH
Confidence 678888888888888877765433221 000 00011222356677
Q ss_pred HHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC-------CCCCchHHHHHHHhhC
Q 026781 153 THIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID-------MSKFPTLLRIYESYKG 216 (233)
Q Consensus 153 ~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~-------~~~~p~l~~~~~~~~~ 216 (233)
....+++..|++.|++ ++|++||+||.-|+.++..+..+ .....+ +..+++|.+|++++.+
T Consensus 166 ~~Aska~~~LS~~Lgs--~kffFgd~psslDa~lfs~la~~-~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 166 KDASKALNLLSTLLGS--KKFFFGDKPSSLDALLFSYLAIL-LQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHhcC--ceEeeCCCCchHHHHHHHHHHHH-HhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 7888999999999998 99999999999999999999986 444332 3459999999999886
No 94
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.34 E-value=6.5e-13 Score=90.46 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhh
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 187 (233)
++..++.+++|+++.. .+.. ........+...+...+.+.+.+..||+.|++++++||+|++||+||+++|
T Consensus 2 ~~~~~a~i~~W~~f~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~ 72 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV-AFRR--------RKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVF 72 (99)
T ss_dssp --TTHHHHHHHHH-GH-CCHC--------CHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHH
T ss_pred chHHHHHHHHHHhccc-hhhh--------HHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHH
Confidence 4456777788888441 0000 000011123346788899999999999999995445999999999999999
Q ss_pred hHHHHHHHHhCCCC-CCCchHHHHHHHhhC
Q 026781 188 PQIAVVTMRFNIDM-SKFPTLLRIYESYKG 216 (233)
Q Consensus 188 ~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~ 216 (233)
+.+..+ . .. ++ ..||+|.+|++||++
T Consensus 73 ~~l~~~-~-~~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 73 GFLASL-R-WA-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHH-H-CC-HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHH-h-hc-ccccccHHHHHHHHhhcC
Confidence 999777 3 22 33 599999999999975
No 95
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.31 E-value=1.5e-11 Score=84.44 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHH
Q 026781 111 QRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQI 190 (233)
Q Consensus 111 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l 190 (233)
++++++.+++..++.........+. .. .....+...+...+.+.+.++.||++|.+++++|++|+++|+||+++++++
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~ 79 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYE-KD-GEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVL 79 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc-Cc-hHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHH
Confidence 4677888888766554433222211 00 000124556778899999999999999754468999999999999999999
Q ss_pred HHHHHHhCC-C-CCCCchHHHHHHHh
Q 026781 191 AVVTMRFNI-D-MSKFPTLLRIYESY 214 (233)
Q Consensus 191 ~~~~~~~~~-~-~~~~p~l~~~~~~~ 214 (233)
.++ ...+. . ...||+|.+|++++
T Consensus 80 ~~~-~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 80 DYL-LYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHH-HhhCchhhHHhChhHHHHHHhC
Confidence 988 44433 3 68899999999985
No 96
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.31 E-value=9.3e-12 Score=79.07 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=50.1
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhh
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEK 97 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~ 97 (233)
+.+++|.+++++|++.|++|+.+.. .. .+ ..+|.|++|+|++||.+|+||.+|+.||.++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~--~~-----~~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCR--AN-----AE--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEec--CC-----cc--ccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 6788999999999999999998832 21 11 1457899999999999999999999999864
No 97
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.30 E-value=6.6e-12 Score=85.15 Aligned_cols=96 Identities=22% Similarity=0.274 Sum_probs=70.5
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHH
Q 026781 116 LQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTM 195 (233)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~ 195 (233)
++|+.+....+.+.+..............++..+...+.+.+.++.||++|++ ++|++|+++|+||+++++++.++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~~~~~g~~~t~aDi~~~~~l~~~-~ 78 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAG--RPYLAGDRFSLADIALAPVLARL-D 78 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCCcCHHHHHHHHHHHHH-H
Confidence 45666666666554333322111111123556778889999999999999987 78999999999999999999999 5
Q ss_pred HhCCC---CCCCchHHHHHHHh
Q 026781 196 RFNID---MSKFPTLLRIYESY 214 (233)
Q Consensus 196 ~~~~~---~~~~p~l~~~~~~~ 214 (233)
..+.. .+.+|++.+|++++
T Consensus 79 ~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 79 LLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HhhhhhhhhccCccHHHHHHhC
Confidence 44444 58899999999875
No 98
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.18 E-value=8.3e-11 Score=83.37 Aligned_cols=68 Identities=10% Similarity=0.052 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC-CCCCchHHHHHHHhhCC
Q 026781 148 LLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID-MSKFPTLLRIYESYKGL 217 (233)
Q Consensus 148 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~ 217 (233)
.+...+.+.+.++.||++|++ ++|+.|+++|+||+++++.+.+.....+.+ ++.||+|.+|++|+.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~--~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKG--QPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcC--CCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhcC
Confidence 457778899999999999987 899999999999999999999883323555 48999999999999763
No 99
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=3.7e-10 Score=76.63 Aligned_cols=93 Identities=16% Similarity=0.250 Sum_probs=66.7
Q ss_pred HHHHHHHhccchhHHHHHHHHH-HhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHH
Q 026781 117 QAASIISSSMQPLHMLSLLKYI-EDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTM 195 (233)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~ 195 (233)
+|.....+.+...+...+...+ ......+...+....++.+.+..||++|++ ++| +++|+|||++++.+.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~---d~~TlADi~l~~~l~~~~~ 77 (98)
T cd03205 3 RLEALADGILDAAVAIVYERRLRPEEKRSQPWLERQRGKIERALDALEAELAK--LPL---DPLDLADIAVACALGYLDF 77 (98)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcHhhhChHHHHHHHHHHHHHHHHHHHhhhh--CCC---CCCCHHHHHHHHHHHHHHh
Confidence 4455555555554444433222 223334566888999999999999999987 788 8999999999999998832
Q ss_pred H-hCCC-CCCCchHHHHHHHh
Q 026781 196 R-FNID-MSKFPTLLRIYESY 214 (233)
Q Consensus 196 ~-~~~~-~~~~p~l~~~~~~~ 214 (233)
. .+.. .++||+|.+|++++
T Consensus 78 ~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 78 RHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HccCcchhhhChHHHHHHHhC
Confidence 2 2333 47899999999985
No 100
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.13 E-value=2.7e-10 Score=75.69 Aligned_cols=65 Identities=20% Similarity=0.271 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCC-------CCCCCchHHHHHHHhh
Q 026781 148 LLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNI-------DMSKFPTLLRIYESYK 215 (233)
Q Consensus 148 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~-------~~~~~p~l~~~~~~~~ 215 (233)
.....+.+.+.++.+|+.|++ ++|++|+++|+|||++++.+.++ ...+. .++.||+|++|++|+.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~--~~yl~Gd~~t~aDi~l~~~l~~~-~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGD--KKFFFGDKPTSLDATVFGHLASI-LYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CCccCCCCCCHHHHHHHHHHHHH-HhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 346678899999999999997 79999999999999999999888 43221 2468999999999974
No 101
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.05 E-value=8.1e-10 Score=71.84 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=62.3
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
.++++||+.+.||+|.+++.+|...|++|+.+.++-. ....++...++..++|+++.+|..+.++..|.+||.
T Consensus 7 ~~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 7 PESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 4679999999999999999999999999999877532 223455566778899999999999999999999984
No 102
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.03 E-value=6.8e-10 Score=78.81 Aligned_cols=68 Identities=16% Similarity=0.234 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHH-h---CC--CCCCCchHHHHHHHhh
Q 026781 146 ERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMR-F---NI--DMSKFPTLLRIYESYK 215 (233)
Q Consensus 146 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~-~---~~--~~~~~p~l~~~~~~~~ 215 (233)
...+...+.+.+.++.|++.|++ ++||+||+||.||+++++++..+... . +. ....||+|.+|++||.
T Consensus 53 ~~~ee~~~~~~~~l~aLs~~Lg~--~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 53 KTLDQVIEEVDQCCQALSQRLGT--QPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 34577888899999999999998 89999999999999999999888321 1 11 1478999999999984
No 103
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.03 E-value=1.6e-09 Score=69.17 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=50.1
Q ss_pred CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhh
Q 026781 29 WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEK 97 (233)
Q Consensus 29 ~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~ 97 (233)
+.||+|.++.++|+.+|++|+++... ++ ..+|.|++|+|+++|+.+.||..|++||.++
T Consensus 14 s~sp~clk~~~~Lr~~~~~~~v~~~~-------n~---~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 14 SVDPECLAVLAYLKFAGAPLKVVPSN-------NP---WRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEecC-------CC---CCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 35799999999999999999887432 11 2458999999999999999999999999875
No 104
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.00 E-value=3.2e-09 Score=71.84 Aligned_cols=113 Identities=19% Similarity=0.080 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhh
Q 026781 108 DPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLA 187 (233)
Q Consensus 108 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 187 (233)
|..++++.+++..|+.+.+.++...+-............-.+...+.+.+.+...+.+|.. |++||+| +.|+||..+.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~-g~~~LFG-ewsIAD~dlA 78 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD-GGPNLFG-EWSIADADLA 78 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT---SSTTS-S--HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCCccc-cchHHHHHHH
Confidence 4678999999999999988776555433332222222334567777888888899999986 6899999 5999999999
Q ss_pred hHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhhhCC
Q 026781 188 PQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLASSP 225 (233)
Q Consensus 188 ~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 225 (233)
+++.++ ...|.++. +.+..|.++.-++|++|+.+.
T Consensus 79 ~ml~Rl-~~~gd~vP--~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 79 LMLNRL-VTYGDPVP--ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHH-HTTT------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHH
Confidence 999999 55555444 689999999999999998764
No 105
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.96 E-value=2.3e-09 Score=77.09 Aligned_cols=64 Identities=16% Similarity=0.163 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHh-CC-CCCCCchHHHHHHHhhC
Q 026781 151 VQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRF-NI-DMSKFPTLLRIYESYKG 216 (233)
Q Consensus 151 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~-~~-~~~~~p~l~~~~~~~~~ 216 (233)
.++.+...+..+=+.+.. +++|+.|++||+|||.+++.+..+ ..+ +. ++.+||++.+|++||.+
T Consensus 80 ~r~~L~~a~~~w~~~~~~-~~~FlaGd~ptIADisvyg~l~s~-e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGK-DRQFHGGSKPNLADLAVYGVLRSV-EGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcC-CCCccCCCCCCHHHHHHHHHHHHH-HHhccccchhhCcCHHHHHHHHHH
Confidence 345555555544344443 268999999999999999999888 555 66 78899999999999986
No 106
>PRK10638 glutaredoxin 3; Provisional
Probab=98.95 E-value=2.4e-09 Score=70.29 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=61.8
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
++++||+.+.||+|.+++.+|...|++|+.+.++... ...+++.+.++..++|+++.+|..+.+...+..+-.
T Consensus 2 ~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~--~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 2 ANVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDA--AKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CcEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCH--HHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 4799999999999999999999999999998886432 234667788999999999999999999988777543
No 107
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.94 E-value=2.4e-09 Score=77.07 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCC-------CCCCchHHHHHHHhhC
Q 026781 147 RLLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNID-------MSKFPTLLRIYESYKG 216 (233)
Q Consensus 147 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~-------~~~~p~l~~~~~~~~~ 216 (233)
..+...+...+.++.||+.|++ ++||+|+++|.+|+++++++..+ ...+.. +.+||+|.+|++|+.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~--~~~~~Gd~~t~~D~~~~~~l~~~-~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGE--SQFFFGDTPTSLDALVFGYLAPL-LKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCC--CCcCCCCCCcHHHHHHHHHHHHH-HhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 4567778888999999999998 89999999999999999999888 332222 5789999999999975
No 108
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.85 E-value=1.5e-08 Score=64.58 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=59.7
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
+++||+.+.||+|.+++-+|...|++|+.+.++... ....+...+....+|+++.||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 589999999999999999999999999988876432 22344455677799999999999999999999974
No 109
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.65 E-value=7.7e-08 Score=61.46 Aligned_cols=69 Identities=23% Similarity=0.260 Sum_probs=57.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
+++||+.+.||+|.+++.+|...|++|+.+.+.-. ....+++.+.++..++|+++.+|..|.+.....+
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~--~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIF--PERKAELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 68999999999999999999999999998877532 2345567788899999999999988877666544
No 110
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.57 E-value=1.7e-07 Score=59.58 Aligned_cols=71 Identities=21% Similarity=0.185 Sum_probs=55.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeee--chHHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVV--SDSYAILLYL 94 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l--~es~~I~~yL 94 (233)
+++||+..+||+|.+++.+|...|++|..+.++.. ....+++.+.++...+|+++.+|..+ ++...|-++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~--~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKD--SAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCC--HHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 47899999999999999999999999988766522 12234566778889999999888777 5666666654
No 111
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.52 E-value=2.9e-07 Score=58.12 Aligned_cols=70 Identities=17% Similarity=0.179 Sum_probs=58.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~y 93 (233)
++++|+.+.||+|++++.+|..+|++|+.+.+... .....++.+.++..++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~--~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILED--GELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 47899999999999999999999999987766532 12345667778889999999999999999888764
No 112
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.48 E-value=3.9e-07 Score=59.34 Aligned_cols=61 Identities=20% Similarity=0.297 Sum_probs=47.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeec
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVS 85 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~ 85 (233)
+++||+.+.||+|.+++-+|...||+|+.+.++-. ....+....++...+|+++.++..+.
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~---~~~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV---PEAAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC---HHHHHHHHHcCCCCcCEEEECCEEEe
Confidence 68999999999999999999999999999988632 11112234468889999997776543
No 113
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.47 E-value=3.3e-07 Score=58.10 Aligned_cols=64 Identities=25% Similarity=0.288 Sum_probs=51.8
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDS 87 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es 87 (233)
.+++|+..+||+|.+++.+|.+.|++|..+.++.. ....+++.+.+|.+.+|+|+.+|..+.+.
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~--~~~~~~~~~~~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDED--PEALEELKKLNGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCC--HHHHHHHHHHcCCcccCEEEECCEEEecC
Confidence 37899999999999999999999999998877542 12345677788999999999888766543
No 114
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.40 E-value=8.8e-07 Score=56.72 Aligned_cols=71 Identities=23% Similarity=0.221 Sum_probs=55.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCC-CcceEEeCCeeechHHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLH-FVPVLVDGDVVVSDSYAILLYL 94 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g-~~P~L~~~g~~l~es~~I~~yL 94 (233)
+++||+.+.||+|.+++-+|...|++|+.+.++... ....++....... .+|+++.+|..+.+...+.++-
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~--~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDP--ALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 478999999999999999999999999988876321 1223333334444 8999999999999998887764
No 115
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.35 E-value=1.6e-06 Score=56.26 Aligned_cols=71 Identities=20% Similarity=0.146 Sum_probs=54.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
.+++|+.+.||||.+++-+|...|++|+.+.++....+.........++..++|+++.|+..+.....+-+
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~ 72 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDA 72 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHH
Confidence 57899999999999999999999999999998765432222333344588999999988877765444433
No 116
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.28 E-value=1.4e-06 Score=55.89 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=52.9
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcC-CCCCcceEE-eCCeeechHH--HHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELN-PLHFVPVLV-DGDVVVSDSY--AILLYL 94 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~-p~g~~P~L~-~~g~~l~es~--~I~~yL 94 (233)
+++||+..+||+|++++-.|...|++|+.+.++- .......+.+.+ +...+|+++ ++|..+.++. .|..+|
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~--~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEE--DEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcC--CHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHh
Confidence 4789999999999999999999999998766542 223334555666 888999998 6777766543 344444
No 117
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.26 E-value=3.6e-06 Score=57.00 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=59.5
Q ss_pred CCCCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCC-CCCChhhhhcCCCCCcceEEeCCeeechHHHHHHH
Q 026781 18 SSSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKG-EQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 18 ~~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~-~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~y 93 (233)
...+++++|+.+.||+|.+++-+|...|++|+.+.++-.+. ......+...+...++|.+..+|..|.+...+...
T Consensus 5 i~~~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 5 VSEKAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred hccCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHH
Confidence 34578999999999999999999999999999988874321 11122344556778999999999999888877664
No 118
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.25 E-value=3.4e-06 Score=54.61 Aligned_cols=72 Identities=21% Similarity=0.209 Sum_probs=58.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
+++|+.+.||+|.+++-+|+..|++|+.+.++... ....++.+.+....+|+++.+|..+.+...+..+-.+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~--~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDP--ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCH--HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 57999999999999999999999999999886432 1234455566678999999999999888888776554
No 119
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.23 E-value=5.7e-06 Score=54.38 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=60.1
Q ss_pred ceEEeeeCCChhhHHHHHHHHH-----cCCCceEEEeecCCCCCCChhhhhcCC--CCCcceEEeCCeeechHHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKL-----KGLIYEYKAVDLSKGEQFSPEFEELNP--LHFVPVLVDGDVVVSDSYAILLYL 94 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~-----~gv~~~~~~~~~~~~~~~~~~~~~~~p--~g~~P~L~~~g~~l~es~~I~~yL 94 (233)
++++|+.+.||+|.+++-+|.. .|++|+.+.++-.. ....++..... ...+|++..||..+.+...|.+++
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~--~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~ 79 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG--ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYV 79 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh--HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHH
Confidence 6899999999999999999999 89999988876321 11223433332 358999999999999999999999
Q ss_pred HhhCC
Q 026781 95 EEKYP 99 (233)
Q Consensus 95 ~~~~~ 99 (233)
...++
T Consensus 80 ~~~~~ 84 (85)
T PRK11200 80 KENLG 84 (85)
T ss_pred HHhcc
Confidence 88664
No 120
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.17 E-value=9.4e-06 Score=52.77 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=60.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCC-CCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKG-EQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~-~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
++++|+...||+|.+++-+|...+++|+...++..+. ......+.+.+...++|++..+|..+.++..|.++..+
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999999998886532 11122344566677999999999999999999887765
No 121
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=98.14 E-value=1.3e-05 Score=50.72 Aligned_cols=55 Identities=29% Similarity=0.359 Sum_probs=47.3
Q ss_pred CChhhHHHHHHHHHcCCC---ceEEEeecCCCCCCChhhhhcCCCCCcceEEe-CCeeechHHHHHHHH
Q 026781 30 QSSCSWRVRFALKLKGLI---YEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD-GDVVVSDSYAILLYL 94 (233)
Q Consensus 30 ~s~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~-~g~~l~es~~I~~yL 94 (233)
.+|.|..+.++|..++.+ |+++..+ +++ ++|.|++|+|.+ +++.+++-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~-------n~~---~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSN-------NPW---LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcC-------CCC---cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 578999999999999999 7766543 223 569999999998 999999999999998
No 122
>PHA03050 glutaredoxin; Provisional
Probab=98.10 E-value=1.2e-05 Score=55.20 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=58.5
Q ss_pred CCCceEEeeeCCChhhHHHHHHHHHcCC---CceEEEeecCC-CCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 19 SSSKLVLYSYWQSSCSWRVRFALKLKGL---IYEYKAVDLSK-GEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 19 ~~~~~~Ly~~~~s~~~~~~~~~l~~~gv---~~~~~~~~~~~-~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
..+++++|+.+.||||.+++-+|...|+ +|+.+.++-.. +.....++.+.+...+||.++.+|..|-+...+..
T Consensus 11 ~~~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 11 ANNKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred ccCCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 4568999999999999999999999999 78888776321 11223456667777899999999999988877766
No 123
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.09 E-value=7.2e-06 Score=52.08 Aligned_cols=57 Identities=19% Similarity=0.236 Sum_probs=43.4
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCe
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDV 82 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~ 82 (233)
++||+.+.||+|.+++-+|...|++|+.+.++-.. ...+.....+...+|+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~---~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQP---EAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCH---HHHHHHHHcCCcccCEEEECCC
Confidence 57999999999999999999999999998876321 1122233346678999996553
No 124
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.07 E-value=2.4e-05 Score=51.49 Aligned_cols=75 Identities=12% Similarity=0.169 Sum_probs=56.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcC-----CCceEEEeecCCCCCCChhhhhcCCC--CCcceEEeCCeeechHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKG-----LIYEYKAVDLSKGEQFSPEFEELNPL--HFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~g-----v~~~~~~~~~~~~~~~~~~~~~~~p~--g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
+++|+.+.||+|.+++-+|...+ ++|+.+.++.. + ....++...... ..+|++..||..+.++..|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~-~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAE-G-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCC-H-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 57999999999999999999985 45666555421 1 112234433332 689999999999999999999998
Q ss_pred hhCC
Q 026781 96 EKYP 99 (233)
Q Consensus 96 ~~~~ 99 (233)
+.++
T Consensus 80 ~~~~ 83 (86)
T TIGR02183 80 ENFD 83 (86)
T ss_pred hccc
Confidence 8764
No 125
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.01 E-value=5.3e-06 Score=50.68 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=48.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVV 84 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l 84 (233)
+++|+.+.||+|.+++-+|...|++|+.+.++... ...+++.+.+...++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~--~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDE--EAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSH--HHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccch--hHHHHHHHHcCCCccCEEEECCEEC
Confidence 57999999999999999999999999999887542 2334444555778999999888754
No 126
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.86 E-value=6.2e-05 Score=50.75 Aligned_cols=75 Identities=21% Similarity=0.187 Sum_probs=56.8
Q ss_pred CCCCceEEeee-----CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 18 SSSSKLVLYSY-----WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 18 ~~~~~~~Ly~~-----~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
...+++.+|.. +.||||.+++-+|...|++|+.+.+. .......++.+.+...++|.+..+|..|-+...+..
T Consensus 9 i~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~--~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~ 86 (97)
T TIGR00365 9 IKENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVL--EDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIME 86 (97)
T ss_pred hccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHH
Confidence 34568999965 78999999999999999999987664 211223344455667799999999999888877766
Q ss_pred HH
Q 026781 93 YL 94 (233)
Q Consensus 93 yL 94 (233)
..
T Consensus 87 l~ 88 (97)
T TIGR00365 87 MY 88 (97)
T ss_pred HH
Confidence 43
No 127
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.80 E-value=8.5e-05 Score=49.35 Aligned_cols=75 Identities=15% Similarity=0.085 Sum_probs=58.2
Q ss_pred CCCCceEEeee-----CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 18 SSSSKLVLYSY-----WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 18 ~~~~~~~Ly~~-----~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
...+++++|.. +.||+|.+++-+|...|++|+.+.+.-. .....++.+.+...++|.++.+|..|.+...+..
T Consensus 5 i~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~ 82 (90)
T cd03028 5 IKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKE 82 (90)
T ss_pred hccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHH
Confidence 34567889965 5899999999999999999999987532 1223344455667799999999999999888877
Q ss_pred HH
Q 026781 93 YL 94 (233)
Q Consensus 93 yL 94 (233)
..
T Consensus 83 l~ 84 (90)
T cd03028 83 MH 84 (90)
T ss_pred HH
Confidence 44
No 128
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.75 E-value=0.00013 Score=47.50 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=56.7
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCC--ceEEEeecCCCC-CCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHh
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLI--YEYKAVDLSKGE-QFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEE 96 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~--~~~~~~~~~~~~-~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~ 96 (233)
+++|+.++||+|.+++-+|...+++ |+...++..... .....+.+......+|++..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 888877754211 1112244555667899999999999999888876654
No 129
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.70 E-value=8.4e-05 Score=52.22 Aligned_cols=67 Identities=15% Similarity=0.230 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhh
Q 026781 149 LWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEF 220 (233)
Q Consensus 149 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 220 (233)
....+++...|..|+.++.. .. .++.++|+-||.+|+.|+.+..+-+..+. |++.+|+++|.+...|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~--~~-~~n~~ls~DDi~lFp~LR~Lt~vkgi~~P--~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILS--SE-AVNGQLSTDDIILFPILRNLTLVKGLVFP--PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcC--cc-ccCCcCCHHHHHHHHHHhhhhhhcCCCCC--HHHHHHHHHHHHHhCC
Confidence 46677788889999999954 23 34558999999999999999555555544 7899999999886554
No 130
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.62 E-value=0.00017 Score=51.14 Aligned_cols=68 Identities=16% Similarity=0.247 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhh
Q 026781 148 LLWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEF 220 (233)
Q Consensus 148 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 220 (233)
.....+++...|..||.++.. ....-| ++|+-||.+|+.|+.+..+-+..+. |++++|++++.+.-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~--~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~P--~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLAS--PNAVNG-ELSIDDIILFPILRSLTIVKGIQWP--PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SC--TTBTTS-S--HHHHHHHHHHHHHCTCTTS-----HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhcc--ccccCC-CCCHHHHHHHHHHhhhhhccCCcCC--HHHHHHHHHHHHHcCC
Confidence 456778888999999999985 333334 8999999999999999444445444 7899999999886554
No 131
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.39 E-value=8.3e-05 Score=63.41 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=84.6
Q ss_pred ceEEeCCeeechHHHHHHHHHhhCCC-CCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccCchHHHHHHHH
Q 026781 75 PVLVDGDVVVSDSYAILLYLEEKYPQ-RALLPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDKFGPDERLLWVQT 153 (233)
Q Consensus 75 P~L~~~g~~l~es~~I~~yL~~~~~~-~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (233)
+.+..+|..+.++..+..|....... ..|++. + .++.+++.|+++.... ...
T Consensus 39 ~~~~~d~~~l~~a~~~~~~~~~~~~~~~~lf~~-~-~d~~~vd~w~~~s~~~-------------------------~~~ 91 (712)
T KOG1147|consen 39 DKQFLDGRKLNGATEPVVYSAALAKADPKLFGN-N-IDRSQVDHWVSFSSTF-------------------------SFD 91 (712)
T ss_pred hhhccccccccCCccchhhhhhhcccCHhHcCC-c-ccHHHHHHHHHHhhhc-------------------------chH
Confidence 33335577777777777776654432 348888 6 8999999999877641 123
Q ss_pred HHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCC-C-CCCCchHHHHHHHhhCChhhhhhC
Q 026781 154 HIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNI-D-MSKFPTLLRIYESYKGLPEFLASS 224 (233)
Q Consensus 154 ~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~-~-~~~~p~l~~~~~~~~~~p~~~~~~ 224 (233)
.+...+..|+..|.- .+||+|.++|+||+++|..++.--..... . -..+.++.+|++-....++.+.++
T Consensus 92 ~~s~~~~~ld~~l~~--~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 92 EISSSLSELDKFLVL--RTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHHHHHHHhhhhH--HHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 355667778888887 89999999999999999999874111111 1 246788999998655556555555
No 132
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.22 E-value=0.0011 Score=48.01 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=53.8
Q ss_pred ceEEeeeC------CChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCC----CCCcceEEeCCeeechHHHHH
Q 026781 22 KLVLYSYW------QSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNP----LHFVPVLVDGDVVVSDSYAIL 91 (233)
Q Consensus 22 ~~~Ly~~~------~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p----~g~~P~L~~~g~~l~es~~I~ 91 (233)
+++||..+ ..|++.+++-+|...||+|+++.++... ...+++.+... ...+|.+..+|..|-+...+.
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~--~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~ 78 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDS--GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVL 78 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHH
Confidence 36899888 7899999999999999999988876431 12334444433 368999999999998888777
Q ss_pred HH
Q 026781 92 LY 93 (233)
Q Consensus 92 ~y 93 (233)
+.
T Consensus 79 ~L 80 (147)
T cd03031 79 RL 80 (147)
T ss_pred HH
Confidence 63
No 133
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.06 E-value=0.0029 Score=43.00 Aligned_cols=79 Identities=15% Similarity=0.200 Sum_probs=61.7
Q ss_pred cCCCCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCC-CCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHH
Q 026781 17 SSSSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSK-GEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 17 ~~~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~-~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
+.+.+++.+|+-..||+|.+++-+|...|+.+.++.+|-.. +..-...+.+..-..++|.+..+|..|-++..++.+-.
T Consensus 10 ~i~~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 10 MISENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred HhhcCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 45567899999999999999999999999999999988653 22233333344555699999999999988888877543
No 134
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.04 E-value=0.002 Score=54.92 Aligned_cols=70 Identities=13% Similarity=0.123 Sum_probs=53.3
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhh---------hcCCCCCcceEEeCCeeechHHHH
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFE---------ELNPLHFVPVLVDGDVVVSDSYAI 90 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~---------~~~p~g~~P~L~~~g~~l~es~~I 90 (233)
|+++++|+.+.||+|.+++-+|...||+|+.+.++-. ....++. ..+...++|+++.||..|.+-...
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~---~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDD---VKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCC---hhHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHH
Confidence 3479999999999999999999999999999888622 1111211 123566899999889888887776
Q ss_pred HH
Q 026781 91 LL 92 (233)
Q Consensus 91 ~~ 92 (233)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 55
No 135
>PRK10824 glutaredoxin-4; Provisional
Probab=96.96 E-value=0.0036 Score=43.37 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=56.8
Q ss_pred CCCceEEeee-----CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHH
Q 026781 19 SSSKLVLYSY-----WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 19 ~~~~~~Ly~~-----~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~y 93 (233)
..+++.+|.. +.||||.++.-+|...|++|....++-. ......+...+...++|-+..+|..|-++..+...
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 4567888876 4899999999999999999998776532 12233455667778999999999999888777664
No 136
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.43 E-value=0.013 Score=36.11 Aligned_cols=58 Identities=12% Similarity=0.002 Sum_probs=39.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHc-----CCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeec
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLK-----GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVS 85 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~-----gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~ 85 (233)
++++|+.++||+|.+++-+|... +++|....++ ..++.........+|++..+|..++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~------~~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA------EFPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc------cCHhHHHHcCCcccCEEEECCEEEE
Confidence 47899999999999998888765 4555444332 2233443444557999997776554
No 137
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.30 E-value=0.013 Score=36.57 Aligned_cols=66 Identities=24% Similarity=0.214 Sum_probs=47.9
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCC--------CCCChhhhh--cCCCCCcceEE-eCCeeec
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKG--------EQFSPEFEE--LNPLHFVPVLV-DGDVVVS 85 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~--------~~~~~~~~~--~~p~g~~P~L~-~~g~~l~ 85 (233)
|++++||+...||-|....-.|+-.+++|+.+.+.-.-. -...++|-. .+.+-.+|+|. +||.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 346699999999999999999999999999998754311 112333332 34455789998 7777665
No 138
>PTZ00062 glutaredoxin; Provisional
Probab=96.28 E-value=0.015 Score=44.72 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=55.5
Q ss_pred CCCCceEEeee-----CCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 18 SSSSKLVLYSY-----WQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 18 ~~~~~~~Ly~~-----~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
...+++.||.. +.||+|.++.-+|...|++|....+. ..+.....+.+.+...++|.+..+|+.|-+...+.+
T Consensus 110 i~~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 110 IRNHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred HhcCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHH
Confidence 44567889965 57999999999999999999877665 222223344455666789999999999988877766
No 139
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=95.96 E-value=0.01 Score=40.97 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=30.0
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
++||+.+.||+|++++-.|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 58999999999999999999999999999875
No 140
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=95.94 E-value=0.012 Score=41.87 Aligned_cols=32 Identities=6% Similarity=0.128 Sum_probs=30.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|++|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 79999999999999999999999999998874
No 141
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=95.87 E-value=0.014 Score=40.57 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=30.0
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 78999999999999999999999999988764
No 142
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=95.82 E-value=0.015 Score=39.66 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=29.9
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.||+|++++-.|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 57999999999999999999999999998875
No 143
>PRK10026 arsenate reductase; Provisional
Probab=95.61 E-value=0.023 Score=40.87 Aligned_cols=34 Identities=12% Similarity=-0.027 Sum_probs=31.7
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++++|+.+.|.-|++++-.|...|++|+.+.+-
T Consensus 2 ~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 2 SNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 5789999999999999999999999999998874
No 144
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.59 E-value=0.057 Score=35.88 Aligned_cols=68 Identities=19% Similarity=0.177 Sum_probs=49.8
Q ss_pred eEEeeeCCCh------hhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCC----CCCcceEEeCCeeechHHHHHH
Q 026781 23 LVLYSYWQSS------CSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNP----LHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 23 ~~Ly~~~~s~------~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p----~g~~P~L~~~g~~l~es~~I~~ 92 (233)
+++|..+.++ .+++++.+|.-+||+|+.+.++... ....++.+..+ ...+|-+..++..+-+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~--~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNE--ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCH--HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 6788777664 3678899999999999999987542 23344444433 4689999999999888766555
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.36 E-value=0.031 Score=39.81 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=30.4
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 78999999999999999999999999999875
No 146
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.36 E-value=0.028 Score=38.95 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=30.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
.++||+.+.|+.|++++-.|+..|++|+.+.+.
T Consensus 1 ~i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 1 DIIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 378999999999999999999999999998764
No 147
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=95.34 E-value=0.033 Score=38.79 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=31.0
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
++++|+.+.|.-|++++-.|+..|++|+.+.+.
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 589999999999999999999999999988775
No 148
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.31 E-value=0.028 Score=40.05 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=30.4
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 78999999999999999999999999999875
No 149
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.12 E-value=0.035 Score=37.88 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.9
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 57999999999999999999999999998875
No 150
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.11 E-value=0.12 Score=34.40 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=52.8
Q ss_pred CCCceEEe-----eeCCChhhHHHHHHHHHcC-CCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHH
Q 026781 19 SSSKLVLY-----SYWQSSCSWRVRFALKLKG-LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILL 92 (233)
Q Consensus 19 ~~~~~~Ly-----~~~~s~~~~~~~~~l~~~g-v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~ 92 (233)
..+++.|| ..+.|+|+.++--+|..+| ++|..+.+- ..+.........+-..++|=|-.+|+.+-+|.-|.+
T Consensus 13 ~~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL--~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~E 90 (105)
T COG0278 13 KENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVL--QDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVRE 90 (105)
T ss_pred hcCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeec--cCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHH
Confidence 45567777 3578999999999999999 566655553 211222233345567789999999999999987776
Q ss_pred HHH
Q 026781 93 YLE 95 (233)
Q Consensus 93 yL~ 95 (233)
-..
T Consensus 91 m~q 93 (105)
T COG0278 91 MYQ 93 (105)
T ss_pred HHH
Confidence 543
No 151
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.07 E-value=0.034 Score=38.70 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.4
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
++||+.+.||+|++++-.|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 57999999999999999999999999988764
No 152
>PRK10853 putative reductase; Provisional
Probab=94.34 E-value=0.067 Score=37.32 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=29.9
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|.-|++++-.|+..|++|+.+.+.
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 79999999999999999999999999988764
No 153
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=94.06 E-value=0.098 Score=36.94 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=30.5
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
.++||+.+.|.-|++++-.|...|++|+.+.+.
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 478999999999999999999999999998764
No 154
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=93.94 E-value=0.39 Score=30.93 Aligned_cols=55 Identities=24% Similarity=0.211 Sum_probs=39.8
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcC--CCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCC
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKG--LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGD 81 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~g--v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g 81 (233)
+++||+.+.|+.|..++-+|.... .+++...+++. .++++....- ..+|||..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~----~d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDID----EDPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETT----TTHHHHHHSC-TSTSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECC----CCHHHHHHhc-CCCCEEEEcC
Confidence 479999999999999999999764 45778888876 2344443333 4899999655
No 155
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=93.79 E-value=0.23 Score=33.86 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=43.7
Q ss_pred ChhhHHHHHHHHHc---CCCceEEEeecCCCCCCChhhhh-cC-CCCCcceEE-eCCe-------------eechHHHHH
Q 026781 31 SSCSWRVRFALKLK---GLIYEYKAVDLSKGEQFSPEFEE-LN-PLHFVPVLV-DGDV-------------VVSDSYAIL 91 (233)
Q Consensus 31 s~~~~~~~~~l~~~---gv~~~~~~~~~~~~~~~~~~~~~-~~-p~g~~P~L~-~~g~-------------~l~es~~I~ 91 (233)
||.|..+.=+|... .-..+++.|++.. ...+... +. ....+|+|+ .+|. .|.++..|+
T Consensus 24 Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~R---PR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~ 100 (112)
T PF11287_consen 24 CPHCAAIEGLLASFPDLRERLDVRRVDFPR---PRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRIL 100 (112)
T ss_pred CCchHHHHhHHhhChhhhhcccEEEeCCCC---chHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHH
Confidence 66666666665543 4467777777653 1222221 22 246799999 5543 699999999
Q ss_pred HHHHhhCC
Q 026781 92 LYLEEKYP 99 (233)
Q Consensus 92 ~yL~~~~~ 99 (233)
+||.++|+
T Consensus 101 ~~La~r~g 108 (112)
T PF11287_consen 101 RYLAERHG 108 (112)
T ss_pred HHHHHHcC
Confidence 99999997
No 156
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=93.04 E-value=0.16 Score=35.15 Aligned_cols=32 Identities=22% Similarity=0.058 Sum_probs=29.3
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|.-|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 57999999999999999999999999988764
No 157
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=92.90 E-value=0.17 Score=34.86 Aligned_cols=32 Identities=19% Similarity=0.052 Sum_probs=29.2
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+++|+.+.|.-|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 57999999999999999999999999988653
No 158
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=92.69 E-value=1.6 Score=27.55 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=38.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHH----cCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCe
Q 026781 22 KLVLYSYWQSSCSWRVRFALKL----KGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDV 82 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~----~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~ 82 (233)
++++|+.++||+|..+.-.|.. .+..+....++.. ..++..+......+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~----~~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVM----ENPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCc----cCHHHHHHcCCccCCEEEECCE
Confidence 4689999999999988877753 3544566666653 2333334445567999996664
No 159
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=92.58 E-value=0.82 Score=28.95 Aligned_cols=55 Identities=16% Similarity=0.096 Sum_probs=38.0
Q ss_pred ceEEeeeCCChhhHHH----HHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeee
Q 026781 22 KLVLYSYWQSSCSWRV----RFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVV 84 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~----~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l 84 (233)
.+.+|. ++||.|..+ .-++.+.|++++...++- .++ ....-...+|++.-+|..+
T Consensus 2 ~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~-a~~~~v~~vPti~i~G~~~ 60 (76)
T TIGR00412 2 KIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNE-ILEAGVTATPGVAVDGELV 60 (76)
T ss_pred EEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHH-HHHcCCCcCCEEEECCEEE
Confidence 367775 999999988 667788898888877761 112 2222456899999776544
No 160
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=90.89 E-value=0.63 Score=34.64 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhhcCC---ceeecCC-ccHhHHhhhhHHHHH
Q 026781 154 HIEKGFLALEKLLIDFAA---KYATGED-VYMADVFLAPQIAVV 193 (233)
Q Consensus 154 ~~~~~l~~le~~L~~~~~---~~l~G~~-~t~ADi~~~~~l~~~ 193 (233)
.-.+++..|++.|+. . +|++|+. +|-+||.+++.|.-+
T Consensus 112 ~a~~~l~~L~~~L~~--~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 112 LAMECLSLLEELLGE--WEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHHhh--ccccccccCCCCCCHHHHHHHHHHHHH
Confidence 355678889999987 6 8999987 999999999999887
No 161
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=90.65 E-value=1 Score=29.59 Aligned_cols=58 Identities=16% Similarity=0.038 Sum_probs=38.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHc-----CCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeec
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLK-----GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVS 85 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~-----gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~ 85 (233)
.+.+|..++|++|..+.-++... ++.+..+.++ ..++......-..+|+++.||..+.
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~------~~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA------LFQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH------hCHHHHHHcCCccCCEEEECCEEEE
Confidence 58899999999999887777555 4555544443 2233444445567999996665443
No 162
>PHA02125 thioredoxin-like protein
Probab=90.43 E-value=1.1 Score=28.18 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=35.6
Q ss_pred eEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD 79 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~ 79 (233)
+.+|+.++|+.|..+.-.|+. +.+....++.. ...+..+...-..+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~~----~~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLAN--VEYTYVDVDTD----EGVELTAKHHIRSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHH--HhheEEeeeCC----CCHHHHHHcCCceeCeEEC
Confidence 788999999999988777753 45665555532 2345555555668999983
No 163
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=87.01 E-value=1.8 Score=24.93 Aligned_cols=53 Identities=26% Similarity=0.186 Sum_probs=33.0
Q ss_pred eEEeeeCCChhhHHHHHHHH-----HcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 23 LVLYSYWQSSCSWRVRFALK-----LKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~-----~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
+.+|+...|++|.+.+..+. ..++.+....++-. ... .......+...+|+++
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~P~~~ 58 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDED--PAL-EKELKRYGVGGVPTLV 58 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCC--hHH-hhHHHhCCCccccEEE
Confidence 35677888999999999998 34455544444322 111 1112345778999998
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=84.32 E-value=2 Score=28.90 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=38.8
Q ss_pred ceEEeeeCCCh------hhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcC---------CCCCcceEEeCCeeech
Q 026781 22 KLVLYSYWQSS------CSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELN---------PLHFVPVLVDGDVVVSD 86 (233)
Q Consensus 22 ~~~Ly~~~~s~------~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~---------p~g~~P~L~~~g~~l~e 86 (233)
.+++|....++ ..+++..+|..++|+|+.+.+... +....++.+.. +..-.|-++.|+..+-+
T Consensus 2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~--e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gd 79 (99)
T PF04908_consen 2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMD--EEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGD 79 (99)
T ss_dssp SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT---HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEE
T ss_pred EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCC--HHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEee
Confidence 47888776664 367899999999999997776542 22333333322 23345677777776655
Q ss_pred HHHHHH
Q 026781 87 SYAILL 92 (233)
Q Consensus 87 s~~I~~ 92 (233)
--.+.+
T Consensus 80 ye~f~e 85 (99)
T PF04908_consen 80 YEDFEE 85 (99)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 165
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=80.54 E-value=2.1 Score=29.27 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=22.4
Q ss_pred eeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 26 YSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 26 y~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
|+.+.|.-|++++-.|+..|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999987653
No 166
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=80.31 E-value=1.4 Score=30.64 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=13.5
Q ss_pred cceEE--eCCeeechHHHHHHHHHhhCC
Q 026781 74 VPVLV--DGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 74 ~P~L~--~~g~~l~es~~I~~yL~~~~~ 99 (233)
-|-|. -+|..++|++||++|+..-|.
T Consensus 36 ~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 36 GPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp S--EEE-S--S----HHHHHHHHTT--T
T ss_pred cceeeecCCceEEecccHHHHHHHhhcC
Confidence 47784 568999999999999999764
No 167
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=74.70 E-value=16 Score=22.90 Aligned_cols=56 Identities=21% Similarity=0.082 Sum_probs=33.0
Q ss_pred ceEEeeeCCChhhHHHHH----HHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeec
Q 026781 22 KLVLYSYWQSSCSWRVRF----ALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVS 85 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~----~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~ 85 (233)
.++++ .+.||+|..+.- ++...|+.++...+ . ..++. .......+|+++-||..++
T Consensus 2 ~I~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~--~----~~~~~-~~ygv~~vPalvIng~~~~ 61 (76)
T PF13192_consen 2 KIKVF-SPGCPYCPELVQLLKEAAEELGIEVEIIDI--E----DFEEI-EKYGVMSVPALVINGKVVF 61 (76)
T ss_dssp EEEEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEEET--T----THHHH-HHTT-SSSSEEEETTEEEE
T ss_pred EEEEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEEEc--c----CHHHH-HHcCCCCCCEEEECCEEEE
Confidence 35664 566999886655 44555766654443 1 12222 4445678999997776543
No 168
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=71.82 E-value=2.6 Score=32.72 Aligned_cols=60 Identities=23% Similarity=0.336 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHhCCCCCCCchHHHHHHHhhCChhhhh
Q 026781 156 EKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRFNIDMSKFPTLLRIYESYKGLPEFLA 222 (233)
Q Consensus 156 ~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 222 (233)
...+..++..|.+ ++|.-|..++-+|+.+|..+.-- ..-..+++..+|+.++.+.-.+.+
T Consensus 10 ~~glk~l~~sLA~--ks~~~g~~~s~edv~vf~al~~e-----p~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAE--KSYIEGYQLSKEDVVVFAALGVE-----PQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhc--ccCCCCCCcccccceeehhcccC-----cchhhhhHHHHHHHHHHHHHHHHh
Confidence 4668889999998 89999999999999998754222 112567778888888877666654
No 169
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=70.75 E-value=13 Score=24.65 Aligned_cols=57 Identities=11% Similarity=-0.076 Sum_probs=32.4
Q ss_pred CceEEeeeCCChhhHHHHHHH--------HHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 21 SKLVLYSYWQSSCSWRVRFAL--------KLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l--------~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
.-+..|+.++|+.|+...-.+ .+.+ .+....++....+....++.+......+|++.
T Consensus 13 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 13 PVFVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred eEEEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 345667788999998875433 2222 45555566442211123444444566799887
No 170
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=68.67 E-value=9.8 Score=29.57 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=52.7
Q ss_pred CCceEEe-----eeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHH
Q 026781 20 SSKLVLY-----SYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYL 94 (233)
Q Consensus 20 ~~~~~Ly-----~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL 94 (233)
..++.|| ..+.|++++.+.-+|...|++|....|--. +.-+......+-..+.|=|-.+|+.+-++..|.+-+
T Consensus 138 a~~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~D--eelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m~ 215 (227)
T KOG0911|consen 138 AKPVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTD--EELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEMH 215 (227)
T ss_pred cCeEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccCC--HHHHHHhhhhcCCCCccceeECCEeccCcHHHHHHh
Confidence 3456677 246799999999999999999888776422 112222334566778898889999988887776644
Q ss_pred H
Q 026781 95 E 95 (233)
Q Consensus 95 ~ 95 (233)
.
T Consensus 216 ~ 216 (227)
T KOG0911|consen 216 E 216 (227)
T ss_pred h
Confidence 3
No 171
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=64.45 E-value=30 Score=22.61 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=34.0
Q ss_pred ceEEeeeCCChhhHHHHHHHHH----cCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKL----KGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVV 84 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~----~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l 84 (233)
.+.+|+.++|+.|....-.+.. .+-.+....++.. ..+++....-...+|++. .+|..+
T Consensus 16 vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d----~~~~l~~~~~v~~vPt~~i~~~g~~v 80 (97)
T cd02949 16 ILVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDID----EDQEIAEAAGIMGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC----CCHHHHHHCCCeeccEEEEEECCeEE
Confidence 4566777899999887766644 1212444445543 234444333446789887 566543
No 172
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=60.04 E-value=39 Score=20.93 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=33.4
Q ss_pred CceEEeeeCCChhhHHHHHHHHH-----cCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCe
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKL-----KGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDV 82 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~-----~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~ 82 (233)
.-+..|+.++|+.|....-.+.. .++.+-. ++.. ....+...-....+|+++ .+|.
T Consensus 12 ~~ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--i~~~----~~~~~~~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 12 PVVVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVK--VDVD----ENPELAEEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred cEEEEEECCCChhHHHhhHHHHHHHHHCCCceEEE--EECC----CChhHHHhcCcccccEEEEEECCE
Confidence 34666777889999888777755 4444433 3332 223344344556789987 4554
No 173
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=56.52 E-value=13 Score=33.06 Aligned_cols=74 Identities=18% Similarity=0.094 Sum_probs=44.4
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechH----HHHHHHHHh
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDS----YAILLYLEE 96 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es----~~I~~yL~~ 96 (233)
.+++|..+.||+|-.+.-++...-+....+...+.++ ...+++........+|.++.++..+.+. ..+++.+..
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~-~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~~ 197 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDG-ALFQDEVEALGIQGVPAVFLNGEEFHNGRMDLAELLEKLEE 197 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEc-hhCHHHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhh
Confidence 5889999999999887777655544322222222222 2345555555677999999666554442 334455543
No 174
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=56.48 E-value=14 Score=32.71 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=45.1
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCC---ceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeech----HHHHHHHH
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLI---YEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSD----SYAILLYL 94 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~e----s~~I~~yL 94 (233)
.+++|..+.||+|-.+.-++...-+. .+...++- ...+++........+|.++.++..+.+ -..+++.+
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~ 194 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDG----ALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKL 194 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEc----hhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHH
Confidence 48899999999998876666544332 22223332 345566666667799999976655443 23566666
Q ss_pred Hhh
Q 026781 95 EEK 97 (233)
Q Consensus 95 ~~~ 97 (233)
...
T Consensus 195 ~~~ 197 (517)
T PRK15317 195 DTG 197 (517)
T ss_pred hcc
Confidence 553
No 175
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=54.79 E-value=12 Score=25.54 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=21.7
Q ss_pred cceEE-eCCeeechHHHHHHHHHhhCC
Q 026781 74 VPVLV-DGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 74 ~P~L~-~~g~~l~es~~I~~yL~~~~~ 99 (233)
+|.+. .+|.++++|..|++++..++.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46666 889999999999999988764
No 176
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=53.49 E-value=62 Score=22.02 Aligned_cols=60 Identities=10% Similarity=0.046 Sum_probs=36.6
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCC---CceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeeec
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGL---IYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVVS 85 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv---~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l~ 85 (233)
-+..|+.++|+.|+.+.-.++..-- ......++.. ..++..+...-..+|++. .+|..+.
T Consensus 25 vvV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~----~~~~l~~~~~v~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 25 VVCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAE----KAPFLVEKLNIKVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcc----cCHHHHHHCCCccCCEEEEEECCEEEE
Confidence 3556667889989877766644211 1344555543 334444445666899998 6776654
No 177
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=52.35 E-value=42 Score=28.38 Aligned_cols=134 Identities=12% Similarity=0.094 Sum_probs=77.1
Q ss_pred cceEEeCCeeechHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHhccchhHHHHH-----HHHHHhccCchHHH
Q 026781 74 VPVLVDGDVVVSDSYAILLYLEEKYPQRALLPAADPQQRALNLQAASIISSSMQPLHMLSL-----LKYIEDKFGPDERL 148 (233)
Q Consensus 74 ~P~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 148 (233)
.+.+.+.++.+.|+..|+..|...- + .|....+..++.++..|+.-+...-.+..+..+ ..++... + .
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~-~-~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~-G----~ 170 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAP-E-WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKV-G----E 170 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCH-H-HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHc-C----C
Confidence 4444556799999999999887732 1 243333778888888888766655444333322 2222222 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHHHHh-CCCCCCCc-hHHHHHHHhhC
Q 026781 149 LWVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVTMRF-NIDMSKFP-TLLRIYESYKG 216 (233)
Q Consensus 149 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~~~~-~~~~~~~p-~l~~~~~~~~~ 216 (233)
+.-.+.+...++.+|+.-.. ..|..-..-.-.|.+..-+++...... ...-+..| ...++.+|...
T Consensus 171 ~~d~~~i~~~l~~~e~~Y~G--dGWY~DG~~~~~DYYns~aih~y~l~~~~~~~~~~~~~~~~~~~Ra~~ 238 (361)
T PF10022_consen 171 EYDEERIDYDLERIEEWYLG--DGWYSDGPEFQFDYYNSWAIHPYLLLYARLMGDEDPERAARYRQRAQR 238 (361)
T ss_pred CCcHHHHHHHHHHHHHHhcc--CCccccCCccCCcchHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 22236777888888887775 566663335567888866666552111 11112222 46666666554
No 178
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=52.07 E-value=36 Score=23.17 Aligned_cols=52 Identities=17% Similarity=0.109 Sum_probs=32.2
Q ss_pred eEEe-eeCCChhhHHHHHHHHHcCCC---ceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 23 LVLY-SYWQSSCSWRVRFALKLKGLI---YEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 23 ~~Ly-~~~~s~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
++++ +.++||.|+.++-+|....-. .+...++.. ..++....-....+|++.
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d----~~~~l~~~~~v~~vPt~~ 80 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD----EDKEKAEKYGVERVPTTI 80 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC----cCHHHHHHcCCCcCCEEE
Confidence 5555 457899999887777644332 233444432 345555555667899998
No 179
>COG3011 Predicted thiol-disulfide oxidoreductase [General function prediction only]
Probab=47.94 E-value=1e+02 Score=22.12 Aligned_cols=79 Identities=14% Similarity=-0.075 Sum_probs=45.4
Q ss_pred CCCCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCC----CcceEEeCCeeechHHHHHHH
Q 026781 18 SSSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLH----FVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 18 ~~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g----~~P~L~~~g~~l~es~~I~~y 93 (233)
|..+++++++-..|+.|-..--.|..+...-..+..++... ..-..+...+.. ..=+++.+|..+.+|.|+++-
T Consensus 5 ~~~p~~vvlyDG~C~lC~~~vrfLi~~D~~~~i~f~~~q~e--~g~~~l~~~~l~~~~~~s~~~~~~g~~~~~sdA~~~i 82 (137)
T COG3011 5 MKKPDLVVLYDGVCPLCDGWVRFLIRRDQGGRIRFAALQSE--PGQALLEAAGLDPEDVDSVLLVEAGQLLVGSDAAIRI 82 (137)
T ss_pred CCCCCEEEEECCcchhHHHHHHHHHHhccCCcEEEEeccCc--hhhhHHhhcCCChhhhheeeEecCCceEeccHHHHHH
Confidence 34455566666778887766666666655555555554331 112222222221 122334789999999999997
Q ss_pred HHhhC
Q 026781 94 LEEKY 98 (233)
Q Consensus 94 L~~~~ 98 (233)
+-..-
T Consensus 83 ~~~L~ 87 (137)
T COG3011 83 LRLLP 87 (137)
T ss_pred HHHCC
Confidence 76654
No 180
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=45.75 E-value=56 Score=29.35 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=37.2
Q ss_pred ceEEeeeCCChhhHHHHHH----HHHc-CCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeee
Q 026781 22 KLVLYSYWQSSCSWRVRFA----LKLK-GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVV 84 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~----l~~~-gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l 84 (233)
.+++|..+.||+|-.+.-+ ..+. +|..+.+.+. ..++.........+|.++.||..+
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~------~~~~~~~~~~v~~vP~~~i~~~~~ 540 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVS------HFPDLKDEYGIMSVPAIVVDDQQV 540 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECc------ccHHHHHhCCceecCEEEECCEEE
Confidence 4888888999998765543 3444 5766666553 234555445677899999766543
No 181
>PHA03075 glutaredoxin-like protein; Provisional
Probab=44.13 E-value=51 Score=22.87 Aligned_cols=67 Identities=19% Similarity=0.053 Sum_probs=45.8
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEe-CCeeechHHHHHHHHHhhC
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVD-GDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~-~g~~l~es~~I~~yL~~~~ 98 (233)
..+.|+|-+.|+-|+.+.-+|...-=+|+..+++...-.. -.|.+=+|.. .+..+ =+++.+|+...+
T Consensus 3 ~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSfFs---------K~g~v~~lg~d~~y~l--Inn~~~~lgne~ 70 (123)
T PHA03075 3 KTLILFGKPLCSVCESISEALKELEDEYDILRVNILSFFS---------KDGQVKVLGMDKGYTL--INNFFKHLGNEY 70 (123)
T ss_pred ceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeeeec---------cCCceEEEecccceeh--HHHHHHhhcccE
Confidence 4589999999999999999999888899999998653111 1234445553 22222 245677776543
No 182
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=44.09 E-value=88 Score=24.04 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=33.3
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCC---CceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGL---IYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv---~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
.+++|+.++||+|..+.-++...-. ......++.. ..++......-..+|+++
T Consensus 136 ~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~----~~~~~~~~~~V~~vPtl~ 191 (215)
T TIGR02187 136 RIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEAN----ENPDLAEKYGVMSVPKIV 191 (215)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCC----CCHHHHHHhCCccCCEEE
Confidence 4677888999999988877765422 2223334433 344554444556799999
No 183
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=43.82 E-value=47 Score=26.78 Aligned_cols=74 Identities=15% Similarity=0.184 Sum_probs=52.5
Q ss_pred CCCCceEEeeeCCCh------hhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhhc----CCCCCcceEEeCCeeechH
Q 026781 18 SSSSKLVLYSYWQSS------CSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEEL----NPLHFVPVLVDGDVVVSDS 87 (233)
Q Consensus 18 ~~~~~~~Ly~~~~s~------~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~----~p~g~~P~L~~~g~~l~es 87 (233)
.....+.+|.....+ .|..||.+|+-.+|.|+++.+++... ..+++..+ .-...+|.+..+|..|-+.
T Consensus 128 gge~~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVSMd~~--fr~EL~~~lg~~~~~~~LPrVFV~GryIGga 205 (281)
T KOG2824|consen 128 GGEDRVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVSMDSE--FREELQELLGEDEKAVSLPRVFVKGRYIGGA 205 (281)
T ss_pred CCCceEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEecccccHH--HHHHHHHHHhcccccCccCeEEEccEEeccH
Confidence 444578888655442 27789999999999999999987642 22333322 2356799888999999888
Q ss_pred HHHHHH
Q 026781 88 YAILLY 93 (233)
Q Consensus 88 ~~I~~y 93 (233)
..|++-
T Consensus 206 eeV~~L 211 (281)
T KOG2824|consen 206 EEVVRL 211 (281)
T ss_pred HHhhhh
Confidence 877763
No 184
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=42.11 E-value=1.2e+02 Score=21.08 Aligned_cols=21 Identities=5% Similarity=-0.133 Sum_probs=15.5
Q ss_pred eEEeeeCCChhhHHHHHHHHH
Q 026781 23 LVLYSYWQSSCSWRVRFALKL 43 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~ 43 (233)
+..|+.++||+|+.+.=.|..
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~ 47 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSG 47 (122)
T ss_pred EEEEECCCChhHHHHhHHHHH
Confidence 666788999999986555533
No 185
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=41.21 E-value=29 Score=22.06 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=20.5
Q ss_pred ChhhHHHHHHHHHcCCCceEEEe
Q 026781 31 SSCSWRVRFALKLKGLIYEYKAV 53 (233)
Q Consensus 31 s~~~~~~~~~l~~~gv~~~~~~~ 53 (233)
-+|++|+.-+|+..|++|+..+-
T Consensus 15 vGF~rk~L~I~E~~~is~Eh~PS 37 (76)
T cd04911 15 VGFGRKLLSILEDNGISYEHMPS 37 (76)
T ss_pred hcHHHHHHHHHHHcCCCEeeecC
Confidence 48999999999999999998754
No 186
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=41.18 E-value=70 Score=20.12 Aligned_cols=53 Identities=32% Similarity=0.400 Sum_probs=33.9
Q ss_pred ceEEeeeCCChhhHHH-----HHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 22 KLVLYSYWQSSCSWRV-----RFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~-----~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
.++||....+|.++++ +++=++.+-+|+...+|+.. .++.......--.|+|+
T Consensus 3 ~L~Lyv~g~tp~S~~ai~nl~~i~e~~l~~~~~LeVIDv~~----~P~lAe~~~ivAtPtLv 60 (72)
T cd02978 3 VLRLYVAGRTPKSERALQNLKRILEELLGGPYELEVIDVLK----QPQLAEEDKIVATPTLV 60 (72)
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHHhcCCcEEEEEEEccc----CHhHHhhCCEEEechhh
Confidence 4788987777877755 33334558899999999874 34433333334467766
No 187
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=39.03 E-value=1.2e+02 Score=20.37 Aligned_cols=59 Identities=15% Similarity=0.057 Sum_probs=32.5
Q ss_pred CceEEeeeCCChhhHHHHHHH-----HHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee
Q 026781 21 SKLVLYSYWQSSCSWRVRFAL-----KLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV 83 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l-----~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~ 83 (233)
.-+..|+.++|+.|+...-.+ .+.|.......++.. ..+...+...-..+|++. .+|..
T Consensus 26 ~vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d----~~~~l~~~~~V~~~Pt~~i~~~g~~ 91 (111)
T cd02963 26 PYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAG----HERRLARKLGAHSVPAIVGIINGQV 91 (111)
T ss_pred eEEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEecc----ccHHHHHHcCCccCCEEEEEECCEE
Confidence 345666778898887664433 222323444445433 223344444567889887 56643
No 188
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=38.64 E-value=57 Score=23.46 Aligned_cols=76 Identities=18% Similarity=0.159 Sum_probs=50.8
Q ss_pred CCCCceEEeeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCChhhhh-cC---CCCCcceEEeCCeeec---hHHHH
Q 026781 18 SSSSKLVLYSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFSPEFEE-LN---PLHFVPVLVDGDVVVS---DSYAI 90 (233)
Q Consensus 18 ~~~~~~~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~-~~---p~g~~P~L~~~g~~l~---es~~I 90 (233)
.....+..|..+.|++|..-.=.|+.+|+..+.+..+-.. .+.+ .+ -....=+.+.+|..|- -..+|
T Consensus 23 a~~~~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~------alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI 96 (149)
T COG3019 23 AQATEMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDFL------ALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAI 96 (149)
T ss_pred cceeeEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcHH------HHHHhcCCChhhccccEEEEcCEEEeccCCHHHH
Confidence 3456789999999999999988999888888777654221 1111 11 1223345666776553 45789
Q ss_pred HHHHHhhCC
Q 026781 91 LLYLEEKYP 99 (233)
Q Consensus 91 ~~yL~~~~~ 99 (233)
.++|+++.+
T Consensus 97 ~~ll~~~pd 105 (149)
T COG3019 97 ARLLAEKPD 105 (149)
T ss_pred HHHHhCCCC
Confidence 999988763
No 189
>PTZ00051 thioredoxin; Provisional
Probab=38.03 E-value=1.1e+02 Score=19.63 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=31.6
Q ss_pred eEEeeeCCChhhHHHHHHHHHcC---CCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLKG---LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV 83 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~g---v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~ 83 (233)
+..|+.++|+.|+...-.+.... -.+....++.. ....+.+.-....+|+++ .+|..
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~----~~~~~~~~~~v~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVD----ELSEVAEKENITSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECc----chHHHHHHCCCceeeEEEEEeCCeE
Confidence 55667788988887755554421 12333444432 233344444556789887 55543
No 190
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=37.36 E-value=84 Score=19.50 Aligned_cols=25 Identities=24% Similarity=0.236 Sum_probs=21.4
Q ss_pred CcceEEeCCeeechHHHHHHHHHhhC
Q 026781 73 FVPVLVDGDVVVSDSYAILLYLEEKY 98 (233)
Q Consensus 73 ~~P~L~~~g~~l~es~~I~~yL~~~~ 98 (233)
+-||+..+| ..+|-.+|.+||....
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCC
Confidence 569998778 9999999999999843
No 191
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=36.42 E-value=1.2e+02 Score=19.46 Aligned_cols=73 Identities=12% Similarity=0.107 Sum_probs=45.0
Q ss_pred CCceEEeeeCCChhhHHHHHHHHHc----CCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeee------chH
Q 026781 20 SSKLVLYSYWQSSCSWRVRFALKLK----GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVV------SDS 87 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~~l~~~----gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l------~es 87 (233)
..-+..|+.++|+.|+...=.+... +-++....++.. ..+.+.+.-....+|++. .+|..+ .+.
T Consensus 18 ~~vvv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~----~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~ 93 (103)
T PF00085_consen 18 KPVVVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCD----ENKELCKKYGVKSVPTIIFFKNGKEVKRYNGPRNA 93 (103)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETT----TSHHHHHHTTCSSSSEEEEEETTEEEEEEESSSSH
T ss_pred CCEEEEEeCCCCCccccccceecccccccccccccchhhhh----ccchhhhccCCCCCCEEEEEECCcEEEEEECCCCH
Confidence 3446677778999999887555322 225556666654 334555555677899998 666433 345
Q ss_pred HHHHHHHHh
Q 026781 88 YAILLYLEE 96 (233)
Q Consensus 88 ~~I~~yL~~ 96 (233)
..|..+|.+
T Consensus 94 ~~l~~~i~~ 102 (103)
T PF00085_consen 94 ESLIEFIEK 102 (103)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 566666654
No 192
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=35.43 E-value=79 Score=20.25 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=33.3
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcC----CCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKG----LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV 83 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~g----v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~ 83 (233)
-+..|+.++|+.|+...-.+...- -.+....++.. ..+.+.+.-....+|+++ .+|..
T Consensus 15 vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~----~~~~l~~~~~i~~~Pt~~~~~~g~~ 78 (96)
T cd02956 15 VVVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCD----AQPQIAQQFGVQALPTVYLFAAGQP 78 (96)
T ss_pred EEEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEecc----CCHHHHHHcCCCCCCEEEEEeCCEE
Confidence 345556778888887755554322 12444455543 234444444556799998 66643
No 193
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=34.82 E-value=1.2e+02 Score=19.28 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=33.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHc----CCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLK----GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV 83 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~----gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~ 83 (233)
-+..|+.++|+.|++..-.|... +-.+....++.. ..+++.+.-....+|++. .+|..
T Consensus 17 v~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~----~~~~~~~~~~i~~~Pt~~~~~~g~~ 80 (97)
T cd02984 17 LVLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAE----ELPEISEKFEITAVPTFVFFRNGTI 80 (97)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccc----cCHHHHHhcCCccccEEEEEECCEE
Confidence 35666778899898886666542 223444445432 233343333355789887 56654
No 194
>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.32 E-value=1.1e+02 Score=23.98 Aligned_cols=29 Identities=10% Similarity=-0.045 Sum_probs=18.3
Q ss_pred CCceEEeeeCCChhhHH----HHHHHHHcCCCc
Q 026781 20 SSKLVLYSYWQSSCSWR----VRFALKLKGLIY 48 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~----~~~~l~~~gv~~ 48 (233)
.-.|.+|+-..||||.. .+-++...+-.+
T Consensus 5 ~i~I~v~sD~vCPwC~ig~~rL~ka~~~~~~~~ 37 (225)
T COG2761 5 KIEIDVFSDVVCPWCYIGKRRLEKALAEYPQEV 37 (225)
T ss_pred eEEEEEEeCCcCchhhcCHHHHHHHHHhcCcce
Confidence 34577888889999984 444444445444
No 195
>COG3917 NahD 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.27 E-value=2.2e+02 Score=21.65 Aligned_cols=91 Identities=12% Similarity=0.062 Sum_probs=52.9
Q ss_pred CCCceEEeeeCCChhhH----HHHHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCC-CcceEEeCCeeechHHHHHHH
Q 026781 19 SSSKLVLYSYWQSSCSW----RVRFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLH-FVPVLVDGDVVVSDSYAILLY 93 (233)
Q Consensus 19 ~~~~~~Ly~~~~s~~~~----~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g-~~P~L~~~g~~l~es~~I~~y 93 (233)
+++.|..|..-.||++. +++-+..-.|.....+++-+..- .+ ..| .+|.....+.-=+.....-||
T Consensus 6 ~~ktIef~fdf~SP~ayL~~~~~~~laq~~ga~v~~rP~llg~v-------fk--~tG~~~Pl~~~~~~~dY~~~d~~R~ 76 (203)
T COG3917 6 MNKTIEFYFDFSSPYAYLAWPRLPALAQAYGAAVALRPILLGGV-------FK--ATGNGVPLIKTPQPGDYITLDLKRE 76 (203)
T ss_pred CCceeEEEEecCCchHHhhhhhhHHHHHHcCCceEEEeeeecee-------Ee--ecCCCCcccccCCCCceehHHHHHH
Confidence 34568888777889876 67778888899988888765210 00 223 566666443222344445555
Q ss_pred HHhhC-C--CCCCCCCCCHHHHHHHHHHH
Q 026781 94 LEEKY-P--QRALLPAADPQQRALNLQAA 119 (233)
Q Consensus 94 L~~~~-~--~~~l~p~~~~~~~a~~~~~~ 119 (233)
..+.. | .+..+|. +..-.++...++
T Consensus 77 akr~Glp~~f~~~fp~-nt~~~~R~~~~~ 104 (203)
T COG3917 77 AKRHGLPLRFPRHFPP-NTLGAARAMIAL 104 (203)
T ss_pred HHHcCCccccCCCCCC-chHHHHHHHHHH
Confidence 54432 1 2345666 665566555554
No 196
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=30.74 E-value=70 Score=21.10 Aligned_cols=57 Identities=9% Similarity=-0.034 Sum_probs=29.6
Q ss_pred ceEEeeeCCChhhHHHHHHHHHc----C-CCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLK----G-LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV 83 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~----g-v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~ 83 (233)
-+..|+.++|+.|+...-.+... + -......++.. .++..+..--..+|++. .+|..
T Consensus 20 vvv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-----~~~~~~~~~v~~~Pt~~~~~~g~~ 83 (102)
T cd02948 20 TVVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-----TIDTLKRYRGKCEPTFLFYKNGEL 83 (102)
T ss_pred EEEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-----CHHHHHHcCCCcCcEEEEEECCEE
Confidence 35566678889888765444322 2 11233333322 22333333355788877 56654
No 197
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=29.04 E-value=1.3e+02 Score=19.37 Aligned_cols=56 Identities=14% Similarity=-0.000 Sum_probs=28.2
Q ss_pred CceEEeeeCCChhhHHHHHHH----HHcC--CCceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 21 SKLVLYSYWQSSCSWRVRFAL----KLKG--LIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l----~~~g--v~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
.-+.+|+.++|+.|+...=.+ .... -.+....++... ...+.+.+...-..+|+++
T Consensus 19 ~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~--~~~~~~~~~~~i~~~Pt~~ 80 (104)
T cd02997 19 HVLVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTK--PEHDALKEEYNVKGFPTFK 80 (104)
T ss_pred CEEEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCC--CccHHHHHhCCCccccEEE
Confidence 345667778899988774222 1211 123333344332 1133443333445789887
No 198
>PF04659 Arch_fla_DE: Archaeal flagella protein ; InterPro: IPR006752 Archaeal flagella are unique motility structures, and the absence of bacterial structural motility genes in the complete genome sequences of flagellated archaeal species has always suggested that archaeal flagellar biogenesis is likely mediated by novel components. FlaD and FlaE, are present in the cell as membrane-associated proteins but are not major components of isolated flagellar filaments. Interestingly, flaD was found to encode two proteins, each translated from a separate ribosome binding site. This group of sequences contain the archaeal flaD and flaE proteins. The conserved region that defines these sequences is found in the N-teminal region of flaE but towards the C-terminal region of flaD [].; GO: 0001539 ciliary or flagellar motility
Probab=28.87 E-value=1.8e+02 Score=19.50 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=24.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Q 026781 104 LPAADPQQRALNLQAASIISSSMQPLHMLSLLKYIEDK 141 (233)
Q Consensus 104 ~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (233)
+|. +......+..|+.++.+.+..--......++..-
T Consensus 11 iP~-~~~s~~~~~eWLefLve~~G~~~~~~~L~YY~~i 47 (99)
T PF04659_consen 11 IPE-DYVSEIVVFEWLEFLVERVGHNNAADALDYYESI 47 (99)
T ss_pred CCc-chHHHHHHHHHHHHHHHHcccccHHHHHHHHHHc
Confidence 577 7777778888998888877654444444454443
No 199
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=28.55 E-value=1e+02 Score=20.74 Aligned_cols=60 Identities=8% Similarity=0.062 Sum_probs=32.2
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCC---ceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeeech
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLI---YEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVVSD 86 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l~e 86 (233)
-+..|+.++|+.|+.+.-.++...-. .....++... . .+.+..--..+|++. .+|..+..
T Consensus 27 vvv~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~~----~-~l~~~~~i~~~Pt~~~f~~G~~v~~ 91 (113)
T cd02957 27 VVVHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAEK----A-FLVNYLDIKVLPTLLVYKNGELIDN 91 (113)
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEchh----h-HHHHhcCCCcCCEEEEEECCEEEEE
Confidence 34556678888888765555432211 2234444321 1 333333445789998 67765543
No 200
>KOG0190 consensus Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [Posttranslational modification, protein turnover, chaperones]
Probab=27.25 E-value=3.9e+02 Score=23.83 Aligned_cols=74 Identities=15% Similarity=0.109 Sum_probs=47.8
Q ss_pred eEEeeeCCChhhHHH-------HHHHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCee------echH
Q 026781 23 LVLYSYWQSSCSWRV-------RFALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVV------VSDS 87 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~-------~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~------l~es 87 (233)
|.-||.+||++|.+. --.|...|-+.....||-... .++-...-....|+|. .+|.. ..+.
T Consensus 46 lVeFYAPWCghck~LaPey~kAA~~Lke~~s~i~LakVDat~~----~~~~~~y~v~gyPTlkiFrnG~~~~~Y~G~r~a 121 (493)
T KOG0190|consen 46 LVEFYAPWCGHCKALAPEYEKAATELKEEGSPVKLAKVDATEE----SDLASKYEVRGYPTLKIFRNGRSAQDYNGPREA 121 (493)
T ss_pred EEEEEchhhhhhhhhCcHHHHHHHHhhccCCCceeEEeecchh----hhhHhhhcCCCCCeEEEEecCCcceeccCcccH
Confidence 456678999887643 445555556777888876532 2222222345678887 55543 4677
Q ss_pred HHHHHHHHhhCCC
Q 026781 88 YAILLYLEEKYPQ 100 (233)
Q Consensus 88 ~~I~~yL~~~~~~ 100 (233)
-.|+.|+-++.+.
T Consensus 122 dgIv~wl~kq~gP 134 (493)
T KOG0190|consen 122 DGIVKWLKKQSGP 134 (493)
T ss_pred HHHHHHHHhccCC
Confidence 8899999998763
No 201
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=26.52 E-value=81 Score=18.94 Aligned_cols=31 Identities=16% Similarity=0.004 Sum_probs=19.9
Q ss_pred EEeeeCCChhhHHHHHHHHHcCCCceEEEee
Q 026781 24 VLYSYWQSSCSWRVRFALKLKGLIYEYKAVD 54 (233)
Q Consensus 24 ~Ly~~~~s~~~~~~~~~l~~~gv~~~~~~~~ 54 (233)
+||......-+..++-+|+..||++....-.
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 6777777777999999999999999876543
No 202
>PRK15371 effector protein YopJ; Provisional
Probab=25.18 E-value=2.1e+02 Score=23.36 Aligned_cols=64 Identities=11% Similarity=0.138 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCceeecCCccHhHHhhhhHHHHHH--HHhCCCCCCCchHHHHHHHhhC
Q 026781 150 WVQTHIEKGFLALEKLLIDFAAKYATGEDVYMADVFLAPQIAVVT--MRFNIDMSKFPTLLRIYESYKG 216 (233)
Q Consensus 150 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~l~~~~--~~~~~~~~~~p~l~~~~~~~~~ 216 (233)
...+.+...++.||..+++ +.|+ -+.++..|+-..+.|.... ..-+.++.-|..-.++++.+.+
T Consensus 23 ~~~~~L~~~i~~le~~~~~--G~~~-~~~~~~~Di~~lp~lv~~~N~r~P~LNL~~f~s~~~f~~aik~ 88 (287)
T PRK15371 23 ISNEELKNIITQLEDDIAD--GSWI-HKNYARTDLEVMPALVAQANNKYPEMNLKLVTSPLDLSIEIKE 88 (287)
T ss_pred hhHHHHHHHHHHHHHHHHc--CCCC-CchhHHhhHHhhHHHHHHHhccCCCCCeeecCCHHHHHHHHHH
Confidence 4567789999999999998 7777 4469999999999988773 1223445555555666666553
No 203
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=24.92 E-value=2.2e+02 Score=19.04 Aligned_cols=70 Identities=14% Similarity=0.036 Sum_probs=38.8
Q ss_pred eeeCCChhhHHHHHHHHHcCCCceEEEeecCCCCCCC-hhhhhcC---CCCCcceEEeCCe-eechHHHHHHHHHh
Q 026781 26 YSYWQSSCSWRVRFALKLKGLIYEYKAVDLSKGEQFS-PEFEELN---PLHFVPVLVDGDV-VVSDSYAILLYLEE 96 (233)
Q Consensus 26 y~~~~s~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~-~~~~~~~---p~g~~P~L~~~g~-~l~es~~I~~yL~~ 96 (233)
++-..||+|....-.+...+-.-....++........ .....++ ....+-+ ..+|. ...++.|+.+-+..
T Consensus 2 ~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~ 76 (114)
T PF04134_consen 2 FYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRR 76 (114)
T ss_pred EECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHH
Confidence 4457789988877777766654455555542211110 0111111 2233333 55665 99999999886555
No 204
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=24.70 E-value=1.1e+02 Score=20.23 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=28.1
Q ss_pred ceEEeeeCCChhhHHHHHHHHHcCCC---ceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 22 KLVLYSYWQSSCSWRVRFALKLKGLI---YEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
-+..|+.++|+.|+...=.+....-. .....++.. ...+...+......+|++.
T Consensus 21 vlV~F~a~WC~~C~~~~p~l~~la~~~~~~~~~~vd~~---~~~~~l~~~~~V~~~PT~~ 77 (100)
T cd02999 21 TAVLFYASWCPFSASFRPHFNALSSMFPQIRHLAIEES---SIKPSLLSRYGVVGFPTIL 77 (100)
T ss_pred EEEEEECCCCHHHHhHhHHHHHHHHHhccCceEEEECC---CCCHHHHHhcCCeecCEEE
Confidence 45666678899888776555333211 222333322 1233333333455789887
No 205
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=24.67 E-value=1.5e+02 Score=22.64 Aligned_cols=35 Identities=23% Similarity=0.068 Sum_probs=25.1
Q ss_pred CceEEeeeCCChhhHHH----HHHHHHcCCCceEEEeec
Q 026781 21 SKLVLYSYWQSSCSWRV----RFALKLKGLIYEYKAVDL 55 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~----~~~l~~~gv~~~~~~~~~ 55 (233)
++|.+|+-..||||... +-++...+++.+.+++.+
T Consensus 1 ~~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 1 PKIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred CceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 36789999999998754 445556677777777654
No 206
>PRK10996 thioredoxin 2; Provisional
Probab=24.65 E-value=1.5e+02 Score=20.98 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=33.9
Q ss_pred ceEEeeeCCChhhHHHHHHHHH----cCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeee
Q 026781 22 KLVLYSYWQSSCSWRVRFALKL----KGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVV 84 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~~~~l~~----~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l 84 (233)
-+..|+.++|+.|+...-.+.. .+-.+....++.. ..+++.+..-...+|++. .+|..+
T Consensus 55 vvv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~----~~~~l~~~~~V~~~Ptlii~~~G~~v 119 (139)
T PRK10996 55 VVIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTE----AERELSARFRIRSIPTIMIFKNGQVV 119 (139)
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCC----CCHHHHHhcCCCccCEEEEEECCEEE
Confidence 3566677889988876444433 2223444445543 334554444556789988 566543
No 207
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=24.06 E-value=3.5e+02 Score=21.13 Aligned_cols=74 Identities=9% Similarity=0.027 Sum_probs=39.5
Q ss_pred CceEEeeeCCChhhHHHHHHHHHcCC----CceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeee------chHH
Q 026781 21 SKLVLYSYWQSSCSWRVRFALKLKGL----IYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVV------SDSY 88 (233)
Q Consensus 21 ~~~~Ly~~~~s~~~~~~~~~l~~~gv----~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l------~es~ 88 (233)
.-+..|+.++|+.|+...-.+....- ......++.. ..++..+...-..+|++. .+|..+ ....
T Consensus 54 ~vlV~FyApWC~~Ck~~~P~~e~la~~~~~~v~~~~VD~~----~~~~l~~~~~I~~~PTl~~f~~G~~v~~~~G~~s~e 129 (224)
T PTZ00443 54 PWFVKFYAPWCSHCRKMAPAWERLAKALKGQVNVADLDAT----RALNLAKRFAIKGYPTLLLFDKGKMYQYEGGDRSTE 129 (224)
T ss_pred CEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEecCc----ccHHHHHHcCCCcCCEEEEEECCEEEEeeCCCCCHH
Confidence 34566778899998866554433211 2233333332 233444444456789887 666543 2234
Q ss_pred HHHHHHHhhC
Q 026781 89 AILLYLEEKY 98 (233)
Q Consensus 89 ~I~~yL~~~~ 98 (233)
.|.+|+.+.+
T Consensus 130 ~L~~fi~~~~ 139 (224)
T PTZ00443 130 KLAAFALGDF 139 (224)
T ss_pred HHHHHHHHHH
Confidence 4555655554
No 208
>PHA02278 thioredoxin-like protein
Probab=23.68 E-value=2.3e+02 Score=18.88 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=32.1
Q ss_pred eEEeeeCCChhhHHHHHHHHHc----CCCceEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCeee
Q 026781 23 LVLYSYWQSSCSWRVRFALKLK----GLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDVVV 84 (233)
Q Consensus 23 ~~Ly~~~~s~~~~~~~~~l~~~----gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~~l 84 (233)
+.-|+.++|+-|+...=.++.. +.......++........++..+..--..+|++. .+|..+
T Consensus 18 vV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~~iPT~i~fk~G~~v 85 (103)
T PHA02278 18 IVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIMSTPVLIGYKDGQLV 85 (103)
T ss_pred EEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCccccEEEEEECCEEE
Confidence 4445567888888665444332 2223344455432111123444444556789998 567544
No 209
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=23.62 E-value=1.5e+02 Score=21.78 Aligned_cols=35 Identities=9% Similarity=0.106 Sum_probs=25.4
Q ss_pred ceEEeeeCCChhhHHH----HHHHHHc-CCCceEEEeecC
Q 026781 22 KLVLYSYWQSSCSWRV----RFALKLK-GLIYEYKAVDLS 56 (233)
Q Consensus 22 ~~~Ly~~~~s~~~~~~----~~~l~~~-gv~~~~~~~~~~ 56 (233)
++++|+-..||||... +-+++.. ++.++.+.+.+.
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~ 40 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLR 40 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEeccccc
Confidence 4788988999998754 4444555 888888877654
No 210
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=21.72 E-value=2.4e+02 Score=21.61 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=34.4
Q ss_pred CceEEeee---CCChhhHHHHHHHHHcCCCc---eEEEeecCCCCCCChhhhhcCCCCCcceEE--eCCe
Q 026781 21 SKLVLYSY---WQSSCSWRVRFALKLKGLIY---EYKAVDLSKGEQFSPEFEELNPLHFVPVLV--DGDV 82 (233)
Q Consensus 21 ~~~~Ly~~---~~s~~~~~~~~~l~~~gv~~---~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~--~~g~ 82 (233)
-.+.+|+. ++||.|..+.=.++...-.| +...++... ...++.....-...+|++. .+|.
T Consensus 21 ~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~--~~~~~l~~~~~V~~~Pt~~~f~~g~ 88 (215)
T TIGR02187 21 VEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDT--PEDKEEAEKYGVERVPTTIILEEGK 88 (215)
T ss_pred eEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCC--cccHHHHHHcCCCccCEEEEEeCCe
Confidence 34777777 78888887776665543222 223343321 1344444444566899998 4543
No 211
>PRK09266 hypothetical protein; Provisional
Probab=21.49 E-value=81 Score=25.15 Aligned_cols=60 Identities=25% Similarity=0.216 Sum_probs=40.2
Q ss_pred HHHHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEEeCCeeechHHHHHHHHHhhCC
Q 026781 40 ALKLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLVDGDVVVSDSYAILLYLEEKYP 99 (233)
Q Consensus 40 ~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~~~g~~l~es~~I~~yL~~~~~ 99 (233)
.+...|+++++..+++.+-...++.|..-+-.|-+||-.-|+..+.+...|.+.|.+.|-
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 445668999998887755333444455444568899999777777545677777766553
No 212
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=21.29 E-value=1.5e+02 Score=15.87 Aligned_cols=25 Identities=20% Similarity=0.052 Sum_probs=19.2
Q ss_pred CCCcceEEeCCeeechHHHHHHHHH
Q 026781 71 LHFVPVLVDGDVVVSDSYAILLYLE 95 (233)
Q Consensus 71 ~g~~P~L~~~g~~l~es~~I~~yL~ 95 (233)
.|.+|....++..+.....|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 4678887767778888888888875
No 213
>PRK09301 circadian clock protein KaiB; Provisional
Probab=20.40 E-value=2.8e+02 Score=18.82 Aligned_cols=55 Identities=25% Similarity=0.278 Sum_probs=35.1
Q ss_pred CCceEEeeeCCChhhHHHHH----HH-HHcCCCceEEEeecCCCCCCChhhhhcCCCCCcceEE
Q 026781 20 SSKLVLYSYWQSSCSWRVRF----AL-KLKGLIYEYKAVDLSKGEQFSPEFEELNPLHFVPVLV 78 (233)
Q Consensus 20 ~~~~~Ly~~~~s~~~~~~~~----~l-~~~gv~~~~~~~~~~~~~~~~~~~~~~~p~g~~P~L~ 78 (233)
.-.++||....+|.++++.- ++ ++.+=.|+...+|+.. .|+.......--.|+|+
T Consensus 6 ~~~LrLyVag~tp~S~~ai~nL~~icE~~l~g~y~LeVIDv~~----qPelAE~~~IvATPTLI 65 (103)
T PRK09301 6 TYILKLYVAGNTPNSVRALKTLKNILETEFKGVYALKVIDVLK----NPQLAEEDKILATPTLA 65 (103)
T ss_pred eEEEEEEEeCCCchHHHHHHHHHHHHHHhcCCceEEEEEEccc----CHhHHhHCCeEEecHHh
Confidence 34689998888888876533 22 3444459999999863 44444333444567776
Done!