BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026784
(233 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/224 (83%), Positives = 206/224 (91%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS GQLGH SLQSG+KELLPRRVVALDGI I DVACGGVHTCA+T KGALYAW
Sbjct: 248 EVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGALYAW 307
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q GQLGLGPQT SFSFIP++++++ RNIP LV P GVQLVACGHSHTL+ +RDG+IH
Sbjct: 308 GGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIH 367
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEK+TYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 368 GWGYNSYGQAANEKTTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAD 427
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDD 227
SVTLSNASEIEDVASRTG++ALARLC RLREHLL G E D +DD
Sbjct: 428 SVTLSNASEIEDVASRTGADALARLCGRLREHLLDGSELDYEDD 471
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + + G K P++V L+ F+K V+CG T A+
Sbjct: 83 LFTWGANEFGQLGDGT-EEGKK--YPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTI 139
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q P+ S +F N + V+CG H +
Sbjct: 140 STSRLWVWGQNQGSNY---PRLFSGAFALNTI---------------ICQVSCGAVHVVA 181
Query: 116 YMRDGKIHGWGYNSYGQ 132
DG + WGYN YGQ
Sbjct: 182 LSEDGLLQAWGYNEYGQ 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS--FIPNESDTYFRNIPIL 97
I V+CG VH AL+ G L AWG + GQLG G + N + P L
Sbjct: 168 IICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPEL 227
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V + V+CG HT G+++ WG S GQ
Sbjct: 228 VK---ITRVSCGEYHTAAISEKGEVYTWGLGSTGQ 259
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
L +K A+Y WG GQ G + + IP + P + +ACG HT
Sbjct: 17 LPTKSAIYVWGYNHNGQTGRKGKEQELR-IPKQLSPELFGCPAGANARWLD-IACGREHT 74
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
DG + WG N +GQ + YP V E K + G H
Sbjct: 75 AAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAH 124
>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/210 (88%), Positives = 198/210 (94%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGH SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA T KGALYAW
Sbjct: 246 EVYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQKGALYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQT SFSFIP+ES+++ RNIP LVVP VQ VACGHSHTLV MRDG+IH
Sbjct: 306 GGGQAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDVQHVACGHSHTLVSMRDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
+VTLSNASEIEDVASRTG++ALARLC RLR
Sbjct: 426 NVTLSNASEIEDVASRTGADALARLCGRLR 455
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 65/175 (37%), Gaps = 47/175 (26%)
Query: 5 IYTWGLGSVGQLGHCSLQSG---DKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
IY WG GQ G K+L P G + D+ACG HT A+ S G+
Sbjct: 22 IYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGANARWLDIACGREHTAAVASDGS 81
Query: 60 LYAWGGCQAGQLGLGPQ-TRSFSFIPNESDTYF--------------------------- 91
L+ WG + GQLG G + +R + + +T F
Sbjct: 82 LFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSR 141
Query: 92 ---------RNIPILVV----PNGVQL-VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
N P L PN + V+CG H + DG + WGYN YGQ
Sbjct: 142 LWVWGQNQGSNYPRLFCGAFSPNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQ 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I V+CG VH AL+ G L AWG + GQLG G + + N + P L
Sbjct: 166 IICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V + V+CG HT G+++ WG + GQ
Sbjct: 226 V---KITQVSCGEYHTAAISEKGEVYTWGLGNMGQ 257
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+K A+Y WG Q+GQ G + IP + P + +ACG HT
Sbjct: 16 FPTKSAIYVWGYNQSGQTGRKGKDGQLR-IPKQLPPELFGCPAGANARWLD-IACGREHT 73
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
DG + WG N +GQ + YP V E K + G H
Sbjct: 74 AAVASDGSLFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVSCGAH 123
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/224 (75%), Positives = 199/224 (88%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGH SLQ GDKELLPRRVV LDGIFIKDVACGGVHTC++T GALYAW
Sbjct: 246 EVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQGGALYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG ++GQLGLGPQT FS + N+S T+FRNIP+LVVP GVQLVACG+SHTL+ M DG+IH
Sbjct: 306 GGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGYSHTLISMSDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYN+YGQAANEK TYAWYPSP+DWCVGEVRKLAAGGGHSAVLTDA SLKELCEF LA+
Sbjct: 366 GWGYNNYGQAANEKCTYAWYPSPIDWCVGEVRKLAAGGGHSAVLTDAYSLKELCEFVLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDD 227
S+TLSNA+++ED+A RTGS+ALARLC RLRE++L G + ++
Sbjct: 426 SMTLSNAAKVEDIAYRTGSDALARLCGRLREYMLAGGALEQKEE 469
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 88/224 (39%), Gaps = 60/224 (26%)
Query: 5 IYTWGLGSVGQLGHCSLQSG---DKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
IY WG GQ G + K+L P G + DVACG HT A+ S G+
Sbjct: 21 IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80
Query: 60 LYAWGGCQAGQLGLGPQTR----------SFSFI---------------PNESDTYF--- 91
L+ WG GQLG G + R F+ P+E+D
Sbjct: 81 LFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTR 140
Query: 92 ----------RNIPIL----VVPNG-VQLVACGHSHTLVYMRDGKIHGWGYNSYG----- 131
N+P L PN ++ V+CG H + +G + WGYN YG
Sbjct: 141 RLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRG 200
Query: 132 ------QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
Q A S+YA + V ++ K++ G H+AV++D
Sbjct: 201 VTCEGLQGACIISSYAKFLDEAPELV-KIAKVSCGEYHTAVISD 243
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I++V+CG VH AL+ +G L AWG + GQLG G + I + + P L
Sbjct: 166 IIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA---WYPSPVDWCVG-E 153
V + V+CG HT V G+++ WG + GQ + Y P V G
Sbjct: 226 V---KIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIF 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
++ +A GG H+ +T +L
Sbjct: 283 IKDVACGGVHTCSVTQGGAL 302
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
D G + ++ K A+Y WG Q+GQ G + IP + P
Sbjct: 4 DAIFGTIRPVSVPRKSAIYVWGYNQSGQTGRKGKEDQLR-IPKQLPPELFGCPAGTNARW 62
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 162
+ VACG HT DG + WG N +GQ + P V E K + G
Sbjct: 63 LD-VACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGA 121
Query: 163 H 163
H
Sbjct: 122 H 122
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 191/218 (87%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVH+CA+T GALYAW
Sbjct: 272 EVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAW 331
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG GQLGLGPQ+ FS N SD RNIP+LV+P+GVQLV CGHSHTLV M+D +I+
Sbjct: 332 GGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIY 391
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE
Sbjct: 392 GWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAE 451
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDE 221
+V +SNA IEDVASRTG +ALARLCE+LREHL+ E
Sbjct: 452 TVNMSNALLIEDVASRTGGDALARLCEKLREHLVEQGE 489
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
+YTWG GQLG + +S + P++V AL+ F+K V+CG T A+
Sbjct: 81 LYTWGANDFGQLGDGTEESAKE---PQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTI 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-----------VQ 104
S+ L+ WG Q P+ +F PN + I + +
Sbjct: 138 SRSRLWVWGQNQGSDY---PRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIH 194
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V+CG H + DG + WGYN YGQ
Sbjct: 195 QVSCGAVHVMALSEDGLLQAWGYNEYGQ 222
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
G ++ + L R ++L+ I V+CG VH AL+ G L AWG + GQLG
Sbjct: 168 GATEQSTITCASSQFLSLRCLSLE--VIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGR 225
Query: 74 GPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG 131
G + + + N + P LV + V+CG HT +G+++ WG S G
Sbjct: 226 GCTSEGLQGARVLNAYARFLDEAPELV---KIVRVSCGEYHTAAISENGEVYTWGLGSMG 282
Query: 132 Q------AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
Q + +K +D V +R ++ GG HS +T+
Sbjct: 283 QLGHCSLQSGDKELIPRRVVALDRTV--IRDVSCGGVHSCAVTE 324
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKG 58
IY WG GQ C L+ K L P+ DG ++ DVACG HT A+ S G
Sbjct: 21 IYLWGYNHSGQTARKGKECHLRI-PKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDG 79
Query: 59 ALYAWGGCQAGQLGLGPQ 76
+LY WG GQLG G +
Sbjct: 80 SLYTWGANDFGQLGDGTE 97
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
D GG+ + +K A+Y WG +GQ + + F+ +G
Sbjct: 4 DDMLGGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFK------WQDG 57
Query: 103 VQL----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
L VACG HT DG ++ WG N +GQ + A P V E K
Sbjct: 58 KNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSV 117
Query: 159 AGGGH 163
+ G H
Sbjct: 118 SCGAH 122
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 191/218 (87%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVH+CA+T GALYAW
Sbjct: 348 EVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAW 407
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG GQLGLGPQ+ FS N SD RNIP+LV+P+GVQLV CGHSHTLV M+D +I+
Sbjct: 408 GGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIY 467
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE
Sbjct: 468 GWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAE 527
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDE 221
+V +SNA IEDVASRTG +ALARLCE+LREHL+ E
Sbjct: 528 TVNMSNALLIEDVASRTGGDALARLCEKLREHLVEQGE 565
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
+YTWG GQLG + +S + P++V AL+ F+K V+CG T A+
Sbjct: 157 LYTWGANDFGQLGDGTEESAKE---PQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTI 213
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-----------VQ 104
S+ L+ WG Q P+ +F PN + I + +
Sbjct: 214 SRSRLWVWGQNQGSDY---PRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIH 270
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V+CG H + DG + WGYN YGQ
Sbjct: 271 QVSCGAVHVMALSEDGLLQAWGYNEYGQ 298
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
G ++ + L R ++L+ I V+CG VH AL+ G L AWG + GQLG
Sbjct: 244 GATEQSTITCASSQFLSLRCLSLE--VIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGR 301
Query: 74 GPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG 131
G + + + N + P LV + V+CG HT +G+++ WG S G
Sbjct: 302 GCTSEGLQGARVLNAYARFLDEAPELV---KIVRVSCGEYHTAAISENGEVYTWGLGSMG 358
Query: 132 Q------AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
Q + +K +D V +R ++ GG HS +T+ +L
Sbjct: 359 QLGHCSLQSGDKELIPRRVVALDRTV--IRDVSCGGVHSCAVTEDGAL 404
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKG 58
IY WG GQ C L+ K L P+ DG ++ DVACG HT A+ S G
Sbjct: 97 IYLWGYNHSGQTARKGKECHLRI-PKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDG 155
Query: 59 ALYAWGGCQAGQLGLGPQ 76
+LY WG GQLG G +
Sbjct: 156 SLYTWGANDFGQLGDGTE 173
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
D D GG+ + +K A+Y WG +GQ + + F+
Sbjct: 74 DKAMDMDDMLGGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFK---- 129
Query: 97 LVVPNGVQL----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
+G L VACG HT DG ++ WG N +GQ + A P V
Sbjct: 130 --WQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALET 187
Query: 153 EVRKLAAGGGH 163
E K + G H
Sbjct: 188 EFVKSVSCGAH 198
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 191/218 (87%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVH+CA+T GALYAW
Sbjct: 322 EVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAW 381
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG GQLGLGPQ+ FS N SD RNIP+L++P+GVQLV CGHSHTLV M+D +I+
Sbjct: 382 GGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLIIPSGVQLVTCGHSHTLVSMKDSRIY 441
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE
Sbjct: 442 GWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAE 501
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDE 221
+V +SNA IEDVASRTG +ALARLCE+LREHL+ E
Sbjct: 502 TVNMSNALLIEDVASRTGGDALARLCEKLREHLVEQGE 539
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 32/138 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
+YTWG GQLG + +S + P++V AL+ F+K V+CG T A+
Sbjct: 157 LYTWGANDFGQLGDGTEESAKE---PQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTI 213
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTL 114
S+ L+ WG N+ Y R + PN V + V+CG H +
Sbjct: 214 SRSRLWVWG-------------------QNQGSDYPRLFWGALAPNTVIRQVSCGAVHVM 254
Query: 115 VYMRDGKIHGWGYNSYGQ 132
DG + WGYN YGQ
Sbjct: 255 ALSEDGLLQAWGYNEYGQ 272
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VH AL+ G L AWG + GQLG G + + + N + P L
Sbjct: 242 VIRQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPEL 301
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ------AANEKSTYAWYPSPVDWCV 151
V + V+CG HT +G+++ WG S GQ + +K +D V
Sbjct: 302 V---KIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTV 358
Query: 152 GEVRKLAAGGGHSAVLTDACSL 173
+R ++ GG HS +T+ +L
Sbjct: 359 --IRDVSCGGVHSCAVTEDGAL 378
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
D D GG+ + +K A+Y WG +GQ + + F+
Sbjct: 74 DKAMDMDDMLGGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFK---- 129
Query: 97 LVVPNGVQL----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
+G L VACG HT DG ++ WG N +GQ + A P V
Sbjct: 130 --WQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALET 187
Query: 153 EVRKLAAGGGH 163
E K + G H
Sbjct: 188 EFVKSVSCGAH 198
>gi|225451821|ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 181/215 (84%), Positives = 197/215 (91%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGHCSLQ GDKEL+PRRVVALDGI KD+ACGGVHTCALTSKGALYAW
Sbjct: 246 EVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGVHTCALTSKGALYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ FS NESD RNIP+LVVP GVQL+ACGHSHTL+ M+DG+I
Sbjct: 306 GGGQAGQLGLGPQSGLFSCNLNESDMLLRNIPVLVVPTGVQLIACGHSHTLISMKDGRIC 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSP+DWCVGEVR+LAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLH 218
VT SNASEIEDVASRTGS+ALARLCERLREHL H
Sbjct: 426 CVTPSNASEIEDVASRTGSDALARLCERLREHLPH 460
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VHT AL+ +G + AWG + GQLG G + + N +F P L
Sbjct: 166 IIRQVSCGAVHTVALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA---WYPSPVDWCVG-E 153
V + V+CG HT +G+++ WG + GQ + Y P V G
Sbjct: 226 V---KITQVSCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGIS 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
+ +A GG H+ LT +L
Sbjct: 283 TKDIACGGVHTCALTSKGAL 302
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 30/138 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA---------L 54
++TWG GQLG + G K P++V L F+K ++CG T A +
Sbjct: 80 SLFTWGANDFGQLGD-GTEDGRKH--PKKVKQLQTEFVKSISCGAHCTAAIAEPREKNGI 136
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
S L+ WG Q P +F PN T R V+CG HT+
Sbjct: 137 VSTSRLWVWGQNQGSNY---PHLFWGAFTPN---TIIRQ------------VSCGAVHTV 178
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G + WGYN YGQ
Sbjct: 179 ALSEEGLVQAWGYNEYGQ 196
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+ +K A+Y WG Q GQ G + IP + P + +ACG HT
Sbjct: 15 IPTKSAIYVWGYNQRGQTGRNGKELQLR-IPKQLPPELFGCPAGANSRWLS-IACGREHT 72
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
DG + WG N +GQ + +P V E K + G H
Sbjct: 73 AAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSISCGAH 122
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 189/213 (88%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQSGD EL+PRR+VALDGI ++DV+CGGVH+CA+T GALYAW
Sbjct: 247 EVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGGVHSCAVTESGALYAW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV M+DG+I+
Sbjct: 307 GGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIY 366
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE
Sbjct: 367 GWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAE 426
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHL 216
+V LSNA IEDVASRTG++ALARLC ++REHL
Sbjct: 427 TVNLSNAELIEDVASRTGADALARLCGKVREHL 459
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------T 55
++TWG GQLG + +S + P++V +L+ F+K V+CG T A+
Sbjct: 81 LFTWGANEFGQLGDGTEESAKE---PKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTV 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
SK L+ WG Q P+ +F PN ++ V+CG H +
Sbjct: 138 SKSRLWVWGQNQGSDY---PRLFWGAFTPNTV---------------IKQVSCGAVHVMA 179
Query: 116 YMRDGKIHGWG-YNSYGQAANEKST 139
DG + WG YN YGQ +++
Sbjct: 180 LSEDGLLQAWGSYNEYGQLGRGRTS 204
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGC-QAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
IK V+CG VH AL+ G L AWG + GQLG G ++ + + N + + P
Sbjct: 167 IKQVSCGAVHVMALSEDGLLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQ 226
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVG-E 153
V + V+CG HT +G+++ WG S GQ + + P + G
Sbjct: 227 V---KIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIV 283
Query: 154 VRKLAAGGGHSAVLTDACSL 173
VR ++ GG HS +T++ +L
Sbjct: 284 VRDVSCGGVHSCAVTESGAL 303
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 35 ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRN 93
A + + I V+CG HT A++ G +Y WG GQLG Q+ IP
Sbjct: 223 APEQVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRR------- 275
Query: 94 IPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+V +G+ + V+CG H+ G ++ WG GQ
Sbjct: 276 ---IVALDGIVVRDVSCGGVHSCAVTESGALYAWGGGHVGQ 313
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 10/119 (8%)
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--- 105
+ + +K A+Y WG +GQ + + F+ + NG L
Sbjct: 10 LRVVGVPTKSAIYIWGYNHSGQTARKGKECHLRIPKSLPPKLFK------LGNGKSLRWT 63
Query: 106 -VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
+ACG HT DG + WG N +GQ + A P V E K + G H
Sbjct: 64 DIACGREHTAAVASDGSLFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSVSCGAH 122
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 188/213 (88%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQSGD EL+PRRVVALDGI + DV+CGGVH+CA+T GALYAW
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGGVHSCAVTEGGALYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV M+DG+I+
Sbjct: 306 GGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIY 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQA NEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE
Sbjct: 366 GWGYNSYGQATNEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAE 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHL 216
+V LSNA IEDVASRTG++ALARLCE++REHL
Sbjct: 426 TVNLSNAQLIEDVASRTGADALARLCEKVREHL 458
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------T 55
++TWG GQLG + S + P++V +L+ F+K V+CG T A+
Sbjct: 81 LFTWGANEFGQLGDGTEDSAKE---PKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTV 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
SK L+ WG Q P+ +F PN ++ V+CG H +
Sbjct: 138 SKSRLWVWGQNQGSDY---PRLFWGAFTPNTV---------------IKQVSCGAVHVMA 179
Query: 116 YMRDGKIHGWGYNSYGQAANEKST 139
DG + WGYN YGQ +++
Sbjct: 180 LSEDGLLQAWGYNEYGQLGRGRTS 203
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILV 98
IK V+CG VH AL+ G L AWG + GQLG G ++ + + N + + P V
Sbjct: 167 IKQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQV 226
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ V+CG HT +G+++ WG S GQ
Sbjct: 227 ---KIVRVSCGEYHTAAISENGEVYTWGLGSMGQ 257
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 10/119 (8%)
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--- 105
+ + +K A+Y WG +GQ + + F+ + NG L
Sbjct: 10 LRVVGVPTKSAIYIWGYNHSGQTARKGKECHLRIPKSLPPKLFK------LGNGKSLRWT 63
Query: 106 -VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
+ACG HT DG + WG N +GQ + A P V E K + G H
Sbjct: 64 DIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSVSCGAH 122
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 198/216 (91%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGH SLQ GDKEL+PRRVV+LD IFIKD ACGGVHTCALT +GALYAW
Sbjct: 248 EVYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDAACGGVHTCALTQEGALYAW 307
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q+GQLGLGP T FS IPN+S T+FRNIP+LVVP GVQLVACGHSHTL+ MRDG+IH
Sbjct: 308 GGGQSGQLGLGPDTGLFSCIPNDSRTFFRNIPVLVVPKGVQLVACGHSHTLICMRDGRIH 367
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA SLKELCEF LA+
Sbjct: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAFSLKELCEFVLAD 427
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHG 219
S+TLSNA+++ED+A RTGS+ALARLC RLRE++L G
Sbjct: 428 SMTLSNAAKVEDIAYRTGSDALARLCGRLREYMLAG 463
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 44/186 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA----------L 54
++TWG GQLG + ++ P++V L+ F+K VAC G H A
Sbjct: 83 LFTWGANEFGQLGD---GTEERRKHPKKVKQLESEFVKSVAC-GAHCSACIAEPRENDGT 138
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
S G L+ WG Q L P+ +F PN + ++ V+CG H +
Sbjct: 139 VSTGRLWVWGQNQGSNL---PRLFWGAFEPNTT---------------IKQVSCGAVHVV 180
Query: 115 VYMRDGKIHGWGYNSYG-----------QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
DG + WGYN G Q A S+YA + V ++ +++ G H
Sbjct: 181 ALSEDGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELV-KITRVSCGEYH 239
Query: 164 SAVLTD 169
+A ++D
Sbjct: 240 TAAISD 245
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILV 98
IK V+CG VH AL+ G L AWG + GQLG G + I + + P LV
Sbjct: 169 IKQVSCGAVHVVALSEDGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELV 228
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ V+CG HT G+++ WG + GQ + Y
Sbjct: 229 ---KITRVSCGEYHTAAISDKGEVYTWGLGNMGQLGHTSLQY 267
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
++ K A+Y WG Q+GQ G + IP + P + + +ACG H
Sbjct: 16 SIPRKSAIYVWGYNQSGQTGRKEKDDQLR-IPKQLPPQLFGCPAGLNTRWLD-IACGREH 73
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
T DG + WG N +GQ + +P V E K A G H
Sbjct: 74 TAAIASDGLLFTWGANEFGQLGDGTEERRKHPKKVKQLESEFVKSVACGAH 124
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/224 (74%), Positives = 195/224 (87%), Gaps = 2/224 (0%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++YTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+G+ DV+CGGVH+CA+T G LY
Sbjct: 244 HGEVYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVAGDVSCGGVHSCAVTEGGTLY 303
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWGG GQLGLGPQ+ FS N SD RNIP+LV+P+GV+LV CGHSHTL+ M+DG+
Sbjct: 304 AWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGR 363
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRL 181
I+GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVLTDA SLKELCEF+L
Sbjct: 364 IYGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKL 423
Query: 182 AESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCD 225
AE+V +SNA IEDVASRTG+++LARLCERLREHL+ ++ DC+
Sbjct: 424 AETVNVSNAQIIEDVASRTGADSLARLCERLREHLV--EQGDCE 465
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + +S + P++V A++ F+K V+CG T A+
Sbjct: 81 LFTWGANDFGQLGDGTEESAKE---PKKVNAIETEFVKSVSCGAHCTAAIAEPRENDGTI 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTL 114
SK L+ WG N+ Y R PN V L V+CG H +
Sbjct: 138 SKSRLWVWG-------------------QNQGSDYPRLFWGAFAPNTVILQVSCGAVHVM 178
Query: 115 VYMRDGKIHGWGYNSYGQ 132
DG + WGYN YGQ
Sbjct: 179 ALSEDGVLQAWGYNEYGQ 196
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILV 98
I V+CG VH AL+ G L AWG + GQLG G + + + N + + P LV
Sbjct: 167 ILQVSCGAVHVMALSEDGVLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPELV 226
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVGEVR 155
+ V+CG H G+++ WG S GQ + + P V G V
Sbjct: 227 ---KIVRVSCGEYHAAAISEHGEVYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVA 283
Query: 156 -KLAAGGGHSAVLTDACSL 173
++ GG HS +T+ +L
Sbjct: 284 GDVSCGGVHSCAVTEGGTL 302
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I DV C + + +K A+Y WG Q+GQ + R + F+
Sbjct: 3 IDDVLCN-LRVVGVPTKSAIYIWGYNQSGQTARKGKDRHLRIPKSLPPKLFK------CR 55
Query: 101 NGVQL----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK 156
+G L +ACG HT DG + WG N +GQ + A P V+ E K
Sbjct: 56 DGENLRWIDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEESAKEPKKVNAIETEFVK 115
Query: 157 LAAGGGH 163
+ G H
Sbjct: 116 SVSCGAH 122
>gi|223943903|gb|ACN26035.1| unknown [Zea mays]
gi|414871692|tpg|DAA50249.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 235
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 186/211 (88%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
YTWGLGS+GQLGHCSLQSGD EL+PRRVVALDGI + DV+CGGVH+CA+T GALYAWGG
Sbjct: 3 YTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGGVHSCAVTEGGALYAWGG 62
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV M+DG+I+GW
Sbjct: 63 GHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGW 122
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESV 185
GYNSYGQA NEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE+V
Sbjct: 123 GYNSYGQATNEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETV 182
Query: 186 TLSNASEIEDVASRTGSEALARLCERLREHL 216
LSNA IEDVASRTG++ALARLCE++REHL
Sbjct: 183 NLSNAQLIEDVASRTGADALARLCEKVREHL 213
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/227 (76%), Positives = 199/227 (87%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGH SLQ GDKELLPRRVV LDGIFIKDVACGGVHTCALT GALY W
Sbjct: 246 EVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQGGALYTW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q+GQLGLGPQT FS + N+S T+FRNIP+LVVP GVQLVACGHSHTL+ M DG+IH
Sbjct: 306 GGGQSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGHSHTLISMSDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYN+YGQAANEK TYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEF LA+
Sbjct: 366 GWGYNNYGQAANEKCTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFVLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRN 230
S+TLSNA+++ED+A RTGS+AL RLC RLRE++L G + ++ +
Sbjct: 426 SMTLSNAAKVEDIAYRTGSDALVRLCGRLREYMLAGGALEQKEEMNS 472
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I++V+CG VH AL+ +G L AWG + GQLG G + I + + P L
Sbjct: 166 IIREVSCGAVHVVALSDEGLLQAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA---WYPSPVDWCVG-E 153
V + V+CG HT G+++ WG + GQ + Y P V G
Sbjct: 226 V---KIAKVSCGEYHTAAISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIF 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
++ +A GG H+ LT +L
Sbjct: 283 IKDVACGGVHTCALTQGGAL 302
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 66/227 (29%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV--------VALDGIFIKDVACGGVHTCALTS 56
IY WG GQ G + D+ +P+++ + ++ DVACG HT A+ S
Sbjct: 21 IYVWGYNQSGQTGRKGKE--DQLRIPKQLPPELFGCPAGTNACWL-DVACGREHTAAIAS 77
Query: 57 KGALYAWGGCQAGQLGLGPQTR----------SFSFI---------------PNESDTYF 91
G+L+ WG GQLG G + R F+ P E+D
Sbjct: 78 DGSLFTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGSI 137
Query: 92 -------------RNIPIL----VVPNG-VQLVACGHSHTLVYMRDGKIHGWGYNSYG-- 131
N+P L PN ++ V+CG H + +G + WGYN G
Sbjct: 138 STRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVVALSDEGLLQAWGYNECGQL 197
Query: 132 ---------QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
Q A+ S+YA + V ++ K++ G H+A ++D
Sbjct: 198 GRGVTCEGLQGAHIISSYAKFLDEAPELV-KIAKVSCGEYHTAAISD 243
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 50/129 (38%), Gaps = 10/129 (7%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D IF G + ++ K A+Y WG Q+GQ G + IP + P
Sbjct: 3 IDAIF------GTIRPVSVPRKSAIYVWGYNQSGQTGRKGKEDQLR-IPKQLPPELFGCP 55
Query: 96 ILVVPNGVQL-VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
N L VACG HT DG + WG N +GQ + +P V E
Sbjct: 56 --AGTNACWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKHPEKVKQLESEF 113
Query: 155 RKLAAGGGH 163
K + G H
Sbjct: 114 VKSVSCGAH 122
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/228 (77%), Positives = 202/228 (88%), Gaps = 2/228 (0%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVHTCA+T G+LYAW
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV +DG+IH
Sbjct: 306 GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGD-EFDCDDDTRN 230
+V NASEIEDVASRTGS+ALARLC RLRE +L G EF+ +D+T N
Sbjct: 426 TVNSQNASEIEDVASRTGSDALARLCGRLRESVLDGRCEFE-EDETSN 472
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + +K LP++V L G F+K V+CG T A+
Sbjct: 81 LFTWGANDFGQLGD---GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTL 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q P+ +F P T R V+CG H +
Sbjct: 138 STRRLWIWGQNQGSNF---PRLFWGAFTPQ---TIIRQ------------VSCGAVHVVA 179
Query: 116 YMRDGKIHGWGYNSYGQ 132
DG++ WGYN YGQ
Sbjct: 180 LSDDGQLQAWGYNEYGQ 196
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VH AL+ G L AWG + GQLG G + + I N + P L
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVGE- 153
V + V+CG H+ +G+++ WG S GQ + + + P V G
Sbjct: 226 VT---ITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGIC 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
V+ +A GG H+ +T SL
Sbjct: 283 VKDIACGGVHTCAITQNGSL 302
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D IF G +L K A+Y WG Q+GQ G + +P + P
Sbjct: 3 IDDIF------GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLR-VPRQLHPDLFGCP 55
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ + +ACG HT DG + WG N +GQ + + P V+ GE
Sbjct: 56 GEINSRWLD-IACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFV 114
Query: 156 KLAAGGGH 163
K + G H
Sbjct: 115 KSVSCGAH 122
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV---------ALDGIFIKDVACGGVHTCALT 55
+ WG GQLG G L R++ A + + I V+CG H+ A++
Sbjct: 186 LQAWGYNEYGQLGRGVTSEG---LQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAIS 242
Query: 56 SKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSH 112
G +Y WG GQLG Q+ IP +V +G V+ +ACG H
Sbjct: 243 ENGEVYTWGLGSMGQLGHCSLQSADKELIPRR----------VVALDGICVKDIACGGVH 292
Query: 113 TLVYMRDGKIHGW 125
T ++G ++ W
Sbjct: 293 TCAITQNGSLYAW 305
>gi|147791382|emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
Length = 461
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/214 (82%), Positives = 195/214 (91%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLG++GQLGHCSLQ GDKEL+PRRVVALDGI IKD+ACGGVHTCALTSKGALYAW
Sbjct: 246 EVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALTSKGALYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ FS NESD +NIP+LVVP GVQL+ACGHSHTL+ M+DG+I
Sbjct: 306 GGGQAGQLGLGPQSGLFSCNLNESDMLLQNIPVLVVPTGVQLIACGHSHTLISMKDGRIC 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSP+DWCVGEVR+LAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLL 217
VT SNASEIEDVASRTGS+ALARLCERLR +
Sbjct: 426 CVTPSNASEIEDVASRTGSDALARLCERLRYRFM 459
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VHT AL+ +G + AWG + GQLG G + + N + P L
Sbjct: 166 IIRQVSCGAVHTVALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA---WYPSPVDWCVG-E 153
V + V+CG HT +G+++ WG + GQ + Y P V G
Sbjct: 226 V---KITQVSCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGIS 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
++ +A GG H+ LT +L
Sbjct: 283 IKDIACGGVHTCALTSKGAL 302
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 30/138 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA---------L 54
++TWG GQLG + G K P++V L F+K +CG T A +
Sbjct: 80 SLFTWGANDFGQLGD-GTEDGRKH--PKKVKQLQTEFVKSXSCGAHCTAAIAEPREKNGI 136
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
S L+ WG Q P +F PN T R V+CG HT+
Sbjct: 137 VSTSRLWVWGQNQGSNY---PHLFWGAFTPN---TIIRQ------------VSCGAVHTV 178
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G + WGYN YGQ
Sbjct: 179 ALSEEGLVQAWGYNEYGQ 196
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+ +K A+Y WG Q GQ G + IP + P + +ACG HT
Sbjct: 15 IPTKSAIYVWGYNQRGQTGRNGKELQLR-IPKQLPPELFGCPAGANSRWLS-IACGREHT 72
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
DG + WG N +GQ + +P V E K + G H
Sbjct: 73 AAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXSCGAH 122
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/228 (77%), Positives = 202/228 (88%), Gaps = 2/228 (0%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVHTCA+T G+LYAW
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV +DG+IH
Sbjct: 306 GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGD-EFDCDDDTRN 230
+V NASEIEDVASRTGS+ALARLC RLRE +L G EF+ +D+T N
Sbjct: 426 TVNSQNASEIEDVASRTGSDALARLCGRLRESVLDGRCEFE-EDETSN 472
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + +K LP++V L G F+K V+CG T A+
Sbjct: 81 LFTWGANDFGQLGD---GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTL 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q P+ +F P T R V+CG H +
Sbjct: 138 STCRLWIWGQNQGSNF---PRLFWGAFTPQ---TIIRQ------------VSCGAVHVVA 179
Query: 116 YMRDGKIHGWGYNSYGQ 132
DG++ WGYN YGQ
Sbjct: 180 LSDDGQLQAWGYNEYGQ 196
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VH AL+ G L AWG + GQLG G + + I N + P L
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVGE- 153
V + V+CG H+ +G+++ WG S GQ + + + P V G
Sbjct: 226 VT---ITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGIC 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
V+ +A GG H+ +T SL
Sbjct: 283 VKDIACGGVHTCAITQNGSL 302
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D IF G +L K A+Y WG Q+GQ G + +P + P
Sbjct: 3 IDDIF------GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLR-VPRQLHPDLFGCP 55
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ + +ACG HT DG + WG N +GQ + + P V+ GE
Sbjct: 56 GEINSRWLD-IACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFV 114
Query: 156 KLAAGGGH 163
K + G H
Sbjct: 115 KSVSCGAH 122
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV---------ALDGIFIKDVACGGVHTCALT 55
+ WG GQLG G L R++ A + + I V+CG H+ A++
Sbjct: 186 LQAWGYNEYGQLGRGVTSEG---LQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAIS 242
Query: 56 SKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSH 112
G +Y WG GQLG Q+ IP +V +G V+ +ACG H
Sbjct: 243 ENGEVYTWGLGSMGQLGHCSLQSADKELIPRR----------VVALDGICVKDIACGGVH 292
Query: 113 TLVYMRDGKIHGW 125
T ++G ++ W
Sbjct: 293 TCAITQNGSLYAW 305
>gi|125544756|gb|EAY90895.1| hypothetical protein OsI_12508 [Oryza sativa Indica Group]
Length = 225
Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 182/209 (87%)
Query: 13 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLG 72
+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVH+CA+T GALYAWGG GQLG
Sbjct: 1 MGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLG 60
Query: 73 LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
LGPQ+ FS N SD RNIP+LV+P+GVQLV CGHSHTLV M+D +I+GWGYNSYGQ
Sbjct: 61 LGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 120
Query: 133 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASE 192
AANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE+V +SNA
Sbjct: 121 AANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALL 180
Query: 193 IEDVASRTGSEALARLCERLREHLLHGDE 221
IEDVASRTG +ALARLCE+LREHL+ E
Sbjct: 181 IEDVASRTGGDALARLCEKLREHLVEQGE 209
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/210 (80%), Positives = 190/210 (90%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVHTCA+T G+LYAW
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV +DG+IH
Sbjct: 306 GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
+V NASEIEDVASRTGS+ALARLC RLR
Sbjct: 426 TVNSQNASEIEDVASRTGSDALARLCGRLR 455
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + +K LP++V L G F+K V+CG T A+
Sbjct: 81 LFTWGANDFGQLGD---GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTL 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q P+ +F P T R V+CG H +
Sbjct: 138 STCRLWIWGQNQGSNF---PRLFWGAFTPQ---TIIRQ------------VSCGAVHVVA 179
Query: 116 YMRDGKIHGWGYNSYGQ 132
DG++ WGYN YGQ
Sbjct: 180 LSDDGQLQAWGYNEYGQ 196
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VH AL+ G L AWG + GQLG G + + I N + P L
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVGE- 153
V + V+CG H+ +G+++ WG S GQ + + + P V G
Sbjct: 226 VT---ITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGIC 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
V+ +A GG H+ +T SL
Sbjct: 283 VKDIACGGVHTCAITQNGSL 302
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D IF G +L K A+Y WG Q+GQ G + +P + P
Sbjct: 3 IDDIF------GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLR-VPRQLHPDLFGCP 55
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ + +ACG HT DG + WG N +GQ + + P V+ GE
Sbjct: 56 GEINSRWLD-IACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFV 114
Query: 156 KLAAGGGH 163
K + G H
Sbjct: 115 KSVSCGAH 122
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV---------ALDGIFIKDVACGGVHTCAL 54
+ WG GQLG G L R++ A + + I V+CG H+ A+
Sbjct: 185 QLQAWGYNEYGQLGRGVTSEG---LQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 55 TSKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHS 111
+ G +Y WG GQLG Q+ IP +V +G V+ +ACG
Sbjct: 242 SENGEVYTWGLGSMGQLGHCSLQSADKELIPRR----------VVALDGICVKDIACGGV 291
Query: 112 HTLVYMRDGKIHGW 125
HT ++G ++ W
Sbjct: 292 HTCAITQNGSLYAW 305
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/210 (80%), Positives = 190/210 (90%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVHTCA+T G+LYAW
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAW 305
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV +DG+IH
Sbjct: 306 GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIH 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA+
Sbjct: 366 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAD 425
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
+V NASEIEDVASRTGS+ALARLC RLR
Sbjct: 426 TVNSQNASEIEDVASRTGSDALARLCGRLR 455
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + +K LP++V L G F+K V+CG T A+
Sbjct: 81 LFTWGANDFGQLGD---GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTL 137
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q P+ +F P ++ V+CG H +
Sbjct: 138 STRRLWIWGQNQGSNF---PRLFWGAFTPQTI---------------IRQVSCGAVHVVA 179
Query: 116 YMRDGKIHGWGYNSYGQ 132
DG++ WGYN YGQ
Sbjct: 180 LSDDGQLQAWGYNEYGQ 196
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPIL 97
I+ V+CG VH AL+ G L AWG + GQLG G + + I N + P L
Sbjct: 166 IIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPEL 225
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVGE- 153
V + V+CG H+ +G+++ WG S GQ + + + P V G
Sbjct: 226 VT---ITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGIC 282
Query: 154 VRKLAAGGGHSAVLTDACSL 173
V+ +A GG H+ +T SL
Sbjct: 283 VKDIACGGVHTCAITQNGSL 302
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D IF G +L K A+Y WG Q+GQ G + +P + P
Sbjct: 3 IDDIF------GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLR-VPRQLHPDLFGCP 55
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ + +ACG HT DG + WG N +GQ + + P V+ GE
Sbjct: 56 GEINSRWLD-IACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFV 114
Query: 156 KLAAGGGH 163
K + G H
Sbjct: 115 KSVSCGAH 122
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV---------ALDGIFIKDVACGGVHTCAL 54
+ WG GQLG G L R++ A + + I V+CG H+ A+
Sbjct: 185 QLQAWGYNEYGQLGRGVTSEG---LQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 55 TSKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHS 111
+ G +Y WG GQLG Q+ IP +V +G V+ +ACG
Sbjct: 242 SENGEVYTWGLGSMGQLGHCSLQSADKELIPRR----------VVALDGICVKDIACGGV 291
Query: 112 HTLVYMRDGKIHGW 125
HT ++G ++ W
Sbjct: 292 HTCAITQNGSLYAW 305
>gi|30678534|ref|NP_186879.2| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640269|gb|AEE73790.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 471
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 194/217 (89%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVHTCAL+ +GALYAW
Sbjct: 247 EVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ F + N S+ RN+P+LV+P V+LVACGHSHTLVYMR+G+I
Sbjct: 307 GGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRIC 366
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVLTDA SLKELCEF+LA+
Sbjct: 367 GWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLAD 426
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGD 220
SV LSNASEI+DVA R GSEALARLCERLRE LL GD
Sbjct: 427 SVNLSNASEIQDVAFRMGSEALARLCERLREQLLDGD 463
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 86/225 (38%), Gaps = 60/225 (26%)
Query: 5 IYTWGLGSVGQLGHC---SLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
IY WG GQ G L K+L P G + D++CG HT A+ S G+
Sbjct: 22 IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGS 81
Query: 60 LYAWGGCQAGQLGLGP-------------QTRSFSFI------------PNESDTYF--- 91
L+AWG + GQLG G Q+ F+ P E+D
Sbjct: 82 LFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTS 141
Query: 92 ----------RNIPILV-----VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG----- 131
N+P L ++ V+CG +H + +G + WGYN G
Sbjct: 142 RLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRG 201
Query: 132 ------QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
QA + YA + V ++ +L+ G H+A L+DA
Sbjct: 202 VTCEGLQAPRVINAYAKFLDEAPELV-KIMQLSCGEYHTAALSDA 245
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF--IPNESDTYFRNIPILV 98
I+ V+CG H AL+ +G L AWG + GQLG G + N + P LV
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ ++CG HT G+++ WG S GQ
Sbjct: 228 ---KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQ 258
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
+ ++ +K A+Y WG Q+GQ G Q + IP + P + ++CG
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLR-IPKQLPPELFGCPAGANSRWLD-ISCGR 70
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
HT DG + WG N YGQ + +P V E K + G
Sbjct: 71 EHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG 121
>gi|297828676|ref|XP_002882220.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297328060|gb|EFH58479.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 471
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 193/217 (88%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVHTCAL+ +GALYAW
Sbjct: 247 EVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ + N S+ RN+P+LV+P V+LVACGHSHTLVYMR+G+I
Sbjct: 307 GGGQAGQLGLGPQSGFLFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRIC 366
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVLTDA SLKELCEF+LA+
Sbjct: 367 GWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLAD 426
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGD 220
SV LSNAS+I+DVA R GSEALARLCERLRE LL GD
Sbjct: 427 SVNLSNASKIQDVAFRMGSEALARLCERLREQLLDGD 463
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 30/138 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-------- 55
++TWG GQLG + + G K P++V L F+K V+CG T A+
Sbjct: 81 SLFTWGANEYGQLGDGT-EVGRKH--PKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGT 137
Query: 56 -SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
SK L+ WG Q L P+ S +F ++ V+CG +H +
Sbjct: 138 LSKSRLWVWGQNQGSNL---PRLFSGAFPAT---------------TAIRQVSCGTAHVV 179
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G + WGYN GQ
Sbjct: 180 ALSEEGLLQAWGYNEQGQ 197
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF--IPNESDTYFRNIPILV 98
I+ V+CG H AL+ +G L AWG + GQLG G + + P LV
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVITAYAKFLDEAPELV 227
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ V+CG HT G+++ WG S GQ
Sbjct: 228 ---KIMQVSCGEYHTAAVSDTGEVYTWGLGSMGQ 258
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
+ ++ +K A+Y WG Q+GQ G Q + IP + P + ++CG
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNGQEKLLR-IPKQLPPELFGCPAGANSRWLD-ISCGR 70
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
HT DG + WG N YGQ + +P V E K + G
Sbjct: 71 EHTAAVASDGSLFTWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG 121
>gi|326517537|dbj|BAK03687.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 235
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/212 (78%), Positives = 187/212 (88%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
YTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+GI I+DV+CGGVH+CA+T GALY WGG
Sbjct: 3 YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 62
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLGLGPQ FS N SD RNIP+LV+P+GV+LV CGHSHTLV M+DG+I+GW
Sbjct: 63 GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 122
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESV 185
GYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVLTDA SLKELCEF+LAE+V
Sbjct: 123 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 182
Query: 186 TLSNASEIEDVASRTGSEALARLCERLREHLL 217
SNA IEDVASRTG++ALARLCE+LREHL+
Sbjct: 183 NRSNARLIEDVASRTGADALARLCEKLREHLV 214
>gi|326512034|dbj|BAJ95998.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/212 (78%), Positives = 187/212 (88%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
YTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+GI I+DV+CGGVH+CA+T GALY WGG
Sbjct: 15 YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 74
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLGLGPQ FS N SD RNIP+LV+P+GV+LV CGHSHTLV M+DG+I+GW
Sbjct: 75 GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 134
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESV 185
GYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVLTDA SLKELCEF+LAE+V
Sbjct: 135 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 194
Query: 186 TLSNASEIEDVASRTGSEALARLCERLREHLL 217
SNA IEDVASRTG++ALARLCE+LREHL+
Sbjct: 195 NRSNARLIEDVASRTGADALARLCEKLREHLV 226
>gi|6041806|gb|AAF02126.1|AC009755_19 unknown protein [Arabidopsis thaliana]
Length = 456
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 189/210 (90%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVHTCAL+ +GALYAW
Sbjct: 247 EVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ F + N S+ RN+P+LV+P V+LVACGHSHTLVYMR+G+I
Sbjct: 307 GGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRIC 366
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVLTDA SLKELCEF+LA+
Sbjct: 367 GWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLAD 426
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
SV LSNASEI+DVA R GSEALARLCERLR
Sbjct: 427 SVNLSNASEIQDVAFRMGSEALARLCERLR 456
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 86/225 (38%), Gaps = 60/225 (26%)
Query: 5 IYTWGLGSVGQLGHC---SLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
IY WG GQ G L K+L P G + D++CG HT A+ S G+
Sbjct: 22 IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGS 81
Query: 60 LYAWGGCQAGQLGLGP-------------QTRSFSFI------------PNESDTYF--- 91
L+AWG + GQLG G Q+ F+ P E+D
Sbjct: 82 LFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTS 141
Query: 92 ----------RNIPILV-----VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG----- 131
N+P L ++ V+CG +H + +G + WGYN G
Sbjct: 142 RLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRG 201
Query: 132 ------QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
QA + YA + V ++ +L+ G H+A L+DA
Sbjct: 202 VTCEGLQAPRVINAYAKFLDEAPELV-KIMQLSCGEYHTAALSDA 245
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF--IPNESDTYFRNIPILV 98
I+ V+CG H AL+ +G L AWG + GQLG G + N + P LV
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ ++CG HT G+++ WG S GQ
Sbjct: 228 ---KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQ 258
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
+ ++ +K A+Y WG Q+GQ G Q + IP + P + ++CG
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLR-IPKQLPPELFGCPAGANSRWLD-ISCGR 70
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
HT DG + WG N YGQ + +P V E K + G
Sbjct: 71 EHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG 121
>gi|90657596|gb|ABD96895.1| hypothetical protein [Cleome spinosa]
Length = 477
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/228 (73%), Positives = 194/228 (85%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGLGS+GQLGH SLQ GDKEL+PRRV LD + +K+V+CGGVHTCAL+S GALYAW
Sbjct: 247 EVYTWGLGSMGQLGHISLQVGDKELIPRRVAGLDSLCVKEVSCGGVHTCALSSDGALYAW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG QAGQLGLGPQ+ FS I ++ RN+P LV+P VQLVACGHSHTLVYM+DG+I
Sbjct: 307 GGGQAGQLGLGPQSGFFSCILGGTEMLLRNVPALVIPIDVQLVACGHSHTLVYMKDGRIR 366
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
GWGYNSYGQAAN+KS+YAW+PSPVDWCVG+VRKLAAGGGHSAVLTDA SLKELCEF+LAE
Sbjct: 367 GWGYNSYGQAANDKSSYAWFPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLAE 426
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRNG 231
SVT+SNA +I+DVASR GSEALARLCERLRE LL D ++D G
Sbjct: 427 SVTVSNALKIQDVASRMGSEALARLCERLREQLLDAGHLDHEEDETCG 474
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 30/137 (21%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT--------- 55
++TWG GQLG + + G K P++V L F+K V+CG T A+
Sbjct: 82 LFTWGANEYGQLGDGT-EVGRKR--PKKVKHLQSEFVKSVSCGAFCTAAIAEPRENDGTL 138
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S L+ WG Q L P+ S +F P E+ ++ V+CG +H +
Sbjct: 139 SMSRLWVWGQNQGSNL---PRLFSGAF-PAET--------------AIRQVSCGTAHVVA 180
Query: 116 YMRDGKIHGWGYNSYGQ 132
+G + WGYN +GQ
Sbjct: 181 LSEEGLLQAWGYNEHGQ 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI---PIL 97
I+ V+CG H AL+ +G L AWG + GQLG G + P Y + + P L
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEHGQLGRGVTSEGLQ-APRLIAAYAKFLDEAPEL 226
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V + ++CG HT G+++ WG S GQ
Sbjct: 227 V---KIAQISCGEYHTAAVSEKGEVYTWGLGSMGQ 258
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQL----VA 107
L +K A+Y WG Q+GQ G + + IP + +P + P+G +A
Sbjct: 16 LPTKSAIYVWGYNQSGQTGRNGKEKLLR-IP-------KQLPPDLFGCPSGANSRWLDIA 67
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQ 132
CG HT DG + WG N YGQ
Sbjct: 68 CGREHTSAVASDGSLFTWGANEYGQ 92
>gi|149392741|gb|ABR26173.1| regulator of chromosome condensation (rcc1) family protein [Oryza
sativa Indica Group]
Length = 198
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/182 (75%), Positives = 157/182 (86%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
I+DV+CGGVH+CA+T GALYAWGG GQLGLGPQ+ FS N SD RNIP+LV+
Sbjct: 1 VIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVI 60
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
P+GVQLV CGHSHTLV M+D +I+GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAA
Sbjct: 61 PSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAA 120
Query: 160 GGGHSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHG 219
GGGHSAVLTDACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLCE+LREHL+
Sbjct: 121 GGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLCEKLREHLVEQ 180
Query: 220 DE 221
E
Sbjct: 181 GE 182
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 157/212 (74%), Gaps = 1/212 (0%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWGLGS GQLGH SLQSG+KE+ PRRVV L+G+ + ++ GGVH+CA++S G LY W
Sbjct: 229 DVYTWGLGSSGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQISAGGVHSCAISSAGGLYMW 288
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG AGQLGLGP+ ++ D +F+ IP+LV+P+G + CG HTLV M +G++
Sbjct: 289 GGSHAGQLGLGPRQDRICGT-SDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLL 347
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
G GYNSYGQA + K+ YAWYPSP+DWCVGE+ LAAGGGHSAVLT A +LKE+CE +L +
Sbjct: 348 GCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLTQASNLKEICELKLVD 407
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREH 215
VT S AS I D+ASR ++LAR C R+H
Sbjct: 408 YVTASTASTIADIASRMSCDSLARFCLTFRDH 439
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 36 LDGIF-----IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP-NESDT 89
G+F + VACGG H AL+ G L WG + GQLG G S
Sbjct: 140 FSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFV 199
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSP 146
F N P+ V V+ V CG HT +G ++ WG S GQ + + +P
Sbjct: 200 KFLNEPVETVK--VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVFPRR 257
Query: 147 VDWCVG-EVRKLAAGGGHSAVLTDACSL 173
V G +V +++AGG HS ++ A L
Sbjct: 258 VVTLEGVDVVQISAGGVHSCAISSAGGL 285
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ G S R + + + ++CG HT A+ S G+L+ WG
Sbjct: 12 LYAWGYNQCGQAGQESAIHSAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTWG 71
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT--LVYMRDGKI 122
Q GQLG G +T SD R + V+ VACG + T + RDG
Sbjct: 72 SNQFGQLGDGSET--------NSDRPKRVYGLR--DEAVKSVACGANCTAAIADSRDGTC 121
Query: 123 HG----WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
G WG N Q +N + S V V ++A GG H+A L++
Sbjct: 122 RGRMWIWGQN---QGSNSPRLF----SGVFSSSTVVIQVACGGAHAAALSE 165
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHS 111
+ ++ LYAWG Q GQ G ++ S +P+ I + + P+ ++L+A CG
Sbjct: 6 VPARSVLYAWGYNQCGQ--AGQESAIHSAVPHP-------IRVAIHPSSLRLIAISCGLE 56
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
HT DG + WG N +GQ + T + P V E V+ +A G +A + D+
Sbjct: 57 HTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 2 HLDIYTWGLGSVGQLGH---CSLQSGDK---ELLPRRVVALDGIFIKDVACGGVHTCALT 55
H + TWG GQLG C G K + ++ + +K V CG HT A+
Sbjct: 166 HGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIA 225
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
G +Y WG +GQLG S + + R + L + VQ+ A G H+
Sbjct: 226 HNGDVYTWGLGSSGQLG------HRSLQSGNKEVFPRRVVTLEGVDVVQISA-GGVHSCA 278
Query: 116 YMRDGKIHGWGYNSYGQ 132
G ++ WG + GQ
Sbjct: 279 ISSAGGLYMWGGSHAGQ 295
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWGLGS GQLGH SLQSG+KE+LPRRVV L+G+ + ++ GGVH+CA++S G LY W
Sbjct: 229 DVYTWGLGSSGQLGHRSLQSGNKEVLPRRVVTLEGVDVVQISAGGVHSCAISSAGGLYMW 288
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG AGQLGLGP+ ++ D +F+ IP+LV+P+G + CG HTLV M +G++
Sbjct: 289 GGSHAGQLGLGPRQDRICG-SSDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLL 347
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
G GYNSYGQA + K+ YAWYPSP+DWCVGE+ LAAGGGHSAVLT A +LKE+CE +L +
Sbjct: 348 GCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLTQASNLKEICELKLVD 407
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
VT S AS I D+ASR ++LAR C R
Sbjct: 408 YVTASTASTIADIASRMSCDSLARFCLTFR 437
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP-NESDTYFRNIPILVV 99
+ VACGG H AL+ G L WG + GQLG G S F N P+ V
Sbjct: 150 VIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETV 209
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN---EKSTYAWYPSPVDWCVG-EVR 155
V+ V CG HT +G ++ WG S GQ + + P V G +V
Sbjct: 210 K--VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVLPRRVVTLEGVDVV 267
Query: 156 KLAAGGGHSAVLTDACSL 173
+++AGG HS ++ A L
Sbjct: 268 QISAGGVHSCAISSAGGL 285
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ G S R + + + ++CG HT A+ S G+L+ WG
Sbjct: 12 LYAWGYNQCGQAGQESAIHNAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTWG 71
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT--LVYMRDGKI 122
Q GQLG G +T SD R + V+ VACG + T + RDG
Sbjct: 72 SNQFGQLGDGSET--------NSDRPKRVYGLR--DEAVKSVACGANCTAAIADSRDGTC 121
Query: 123 HG----WGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
G WG N Q +N + A+ S V V ++A GG H+A L++
Sbjct: 122 RGRMWIWGQN---QGSNSPRLFSGAFSSSTV------VIQVACGGAHAAALSE 165
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHS 111
+ ++ LYAWG Q GQ G ++ + +P+ I + + P+ ++L+A CG
Sbjct: 6 VPARSVLYAWGYNQCGQ--AGQESAIHNAVPHP-------IRVAIHPSSLRLIAISCGLE 56
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
HT DG + WG N +GQ + T + P V E V+ +A G +A + D+
Sbjct: 57 HTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 13/137 (9%)
Query: 2 HLDIYTWGLGSVGQLGH---CSLQSGDK---ELLPRRVVALDGIFIKDVACGGVHTCALT 55
H + TWG GQLG C G K + ++ + +K V CG HT A+
Sbjct: 166 HGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIA 225
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
G +Y WG +GQLG S + R + L + VQ+ A G H+
Sbjct: 226 HNGDVYTWGLGSSGQLG------HRSLQSGNKEVLPRRVVTLEGVDVVQISA-GGVHSCA 278
Query: 116 YMRDGKIHGWGYNSYGQ 132
G ++ WG + GQ
Sbjct: 279 ISSAGGLYMWGGSHAGQ 295
>gi|224119280|ref|XP_002331272.1| predicted protein [Populus trichocarpa]
gi|224152233|ref|XP_002337209.1| predicted protein [Populus trichocarpa]
gi|222838468|gb|EEE76833.1| predicted protein [Populus trichocarpa]
gi|222873697|gb|EEF10828.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 11/142 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWGLG++GQLGH SLQSG+KELLPRRVVALDGIF DVA A+T KGALYAWG
Sbjct: 9 MYTWGLGNMGQLGHTSLQSGEKELLPRRVVALDGIFSNDVA------YAVTQKGALYAWG 62
Query: 65 GCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGK 121
G QAGQLGLG SF+ N++ F +L + + + T +++R DG+
Sbjct: 63 GGQAGQLGLGLSNLDLFHSFLVNQNP--FCETSLLWLSQLMCNLLLVDILTHLFLRGDGR 120
Query: 122 IHGWGYNSYGQAANEKSTYAWY 143
IHGWG+NSYGQAANEKST WY
Sbjct: 121 IHGWGFNSYGQAANEKSTLGWY 142
>gi|297722325|ref|NP_001173526.1| Os03g0599600 [Oryza sativa Japonica Group]
gi|255674682|dbj|BAH92254.1| Os03g0599600, partial [Oryza sativa Japonica Group]
Length = 91
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 150 CVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 209
CVGEVR+LAAGGGHSAVLTDACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLC
Sbjct: 4 CVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLC 63
Query: 210 ERLREHLLHGDEFD 223
E+LREHL+ E +
Sbjct: 64 EKLREHLVEQGECE 77
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + L+P+ ++AL G+ IK +ACG H A+T +G + +W
Sbjct: 86 ELYSWGWGDFGRLGHGN---SSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 142
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG T S +P + T F+ +PI ++VA G H++ +G+++
Sbjct: 143 GRNQNGQLGLG--TSEDSLVPQKIQT-FQGVPI-------KMVAAGAEHSVAITENGELY 192
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
GWG+ YG W P V
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+ +WG G GQLGH D LLP + ALD I +ACG HT A + S+ LY+W
Sbjct: 34 VCSWGRGEDGQLGHGDT---DDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSW 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G N SD I + ++ +ACG SH L +G++
Sbjct: 91 GWGDFGRLGHG----------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQ 140
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ S + P + G ++ +AAG HS +T+ L
Sbjct: 141 SWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 191
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + + L+P+++ AL I V+ G H+ ALTS G LY WG
Sbjct: 243 LYTYGWSKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWG 299
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGK 121
+ GQ+G+G D R P+ V P+ ++V +CG HT+
Sbjct: 300 WNKFGQVGVG-------------DNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKEN 346
Query: 122 IHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 347 VFSWGRGTNGQ 357
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + +P +V ++D + VACG HT +++S G LY +
Sbjct: 190 ELYGWGWGRYGNLG---LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTY 246
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G S +P + + + V+ G H++ G ++
Sbjct: 247 GWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLY 296
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 297 GWGWNKFGQ 305
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNG 102
++ G HT AL S + +WG + GQLG G DT R +P L +
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-------------DTDDRLLPTHLSALDA 64
Query: 103 VQL--VACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
Q+ +ACG HTL Y +++ WG+ +G+ + S+ P P+ G ++++A
Sbjct: 65 QQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA 124
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 125 CGDSHCLAVT 134
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WG GQ+G GD P +V + ++CG HT A+T K +++
Sbjct: 295 LYGWGWNKFGQVG-----VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFS 349
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
WG GQLG G DT RN P ++
Sbjct: 350 WGRGTNGQLGHG-------------DTVDRNSPKII 372
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + L+P+ ++AL G+ IK +ACG H A+T +G + +W
Sbjct: 86 ELYSWGWGDFGRLGHGN---SSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 142
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG T S +P + T F+ +PI ++VA G H++ +G+++
Sbjct: 143 GRNQNGQLGLG--TSEDSLVPQKIQT-FQGVPI-------KMVAAGAEHSVAITENGELY 192
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
GWG+ YG W P V
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+ +WG G GQLGH D LLP + ALD I +ACG HT A + S+ LY+W
Sbjct: 34 VCSWGRGEDGQLGHGDT---DDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSW 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G N SD I + ++ +ACG SH L +G++
Sbjct: 91 GWGDFGRLGHG----------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQ 140
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ S + P + G ++ +AAG HS +T+ L
Sbjct: 141 SWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 191
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + + L+P+++ AL I V+ G H+ ALTS G LY WG
Sbjct: 243 LYTYGWSKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWG 299
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGK 121
+ GQ+G+G D R P+ V P+ ++V +CG HT+
Sbjct: 300 WNKFGQVGVG-------------DNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKEN 346
Query: 122 IHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 347 VFSWGRGTNGQ 357
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + +P +V ++D + VACG HT +++S G LY +
Sbjct: 190 ELYGWGWGRYGNLG---LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTY 246
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G S +P + + + V+ G H++ G ++
Sbjct: 247 GWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLY 296
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 297 GWGWNKFGQ 305
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNG 102
++ G HT AL S + +WG + GQLG G DT R +P L +
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-------------DTDDRLLPTHLSALDA 64
Query: 103 VQL--VACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
Q+ +ACG HTL Y +++ WG+ +G+ + S+ P P+ G ++++A
Sbjct: 65 QQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA 124
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 125 CGDSHCLAVT 134
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WG GQ+G GD P +V + ++CG HT A+T K +++
Sbjct: 295 LYGWGWNKFGQVG-----VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFS 349
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
WG GQLG G DT RN P ++
Sbjct: 350 WGRGTNGQLGHG-------------DTVDRNSPKII 372
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 24/143 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG S GQLGH ++ ++ P+ V AL +I VACG HT AL+ L++WG
Sbjct: 287 LYTWGRDSNGQLGHGQAKA---DIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWG 343
Query: 65 GCQAGQLGLGPQT------RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+GQLG + + SF ++S ++ +ACG H+LV ++
Sbjct: 344 LNSSGQLGRASENLKSSDPKKISFFEDKS---------------IKQIACGSKHSLVLLQ 388
Query: 119 DGKIHGWGYNSYGQAANEKSTYA 141
DG ++ WG N YGQ ++ + A
Sbjct: 389 DGTVYSWGSNQYGQLGFDQDSNA 411
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G +LG+ + K P ++ +L I + G H+ A+T+ G LY WG
Sbjct: 234 IFSWGKGGFNRLGYKAEIVNQKH--PLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWG 291
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G Q ++ F P E +N I+ VACG HTL ++ ++
Sbjct: 292 RDSNGQLGHG-QAKADIF-PKEVQA-LQNTYIVS-------VACGEGHTLALSKNNELFS 341
Query: 125 WGYNSYGQ----AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG NS GQ + N KS+ P + + + ++++A G HS VL
Sbjct: 342 WGLNSSGQLGRASENLKSS---DPKKISFFEDKSIKQIACGSKHSLVL 386
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WGL S GQLG S L+S D P+++ + IK +ACG H+ L G +Y
Sbjct: 338 ELFSWGLNSSGQLGRASENLKSSD----PKKISFFEDKSIKQIACGSKHSLVLLQDGTVY 393
Query: 62 AWGGCQAGQLGL 73
+WG Q GQLG
Sbjct: 394 SWGSNQYGQLGF 405
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHTCAL-------- 54
+Y WG+G G+LG+ + + + +GI I +++CG HT A+
Sbjct: 113 VYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNN 172
Query: 55 -TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACG 109
S+ LY WG QLG+ + T + N P+ + P+ V+ V
Sbjct: 173 SQSQNKLYVWGSSSDWQLGI-----------DTGKTDYVNQPLEMSPDYWEGNVESVKAC 221
Query: 110 HSHTLVYMRDGKIHGW---GYNSYGQAA---NEKSTYAWYPSPVD-WCVGEVRKLAAGGG 162
T+ + G+I W G+N G A N+K +P ++ ++ + + G
Sbjct: 222 SDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQK-----HPLQIESLSKQQIIQFSLGSF 276
Query: 163 HSAVLTD 169
HSA +T+
Sbjct: 277 HSAAITN 283
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAG-QLGLGPQTRSFSF---IPNESDTYFRNIPI 96
I + CG H+ A+ + +YAW GC G +LGL + + F IP + IP+
Sbjct: 30 IVKIVCGANHSYAIDTNFEVYAW-GCNLGRKLGLSDEYYNQIFQADIPEQI-----KIPV 83
Query: 97 LVVP---NGVQLVACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWY--------- 143
V + ++ G +H+ + + +++ WG YG+ N++S Y
Sbjct: 84 KVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQ 143
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVL 167
P + W E+ +++ G H+ +
Sbjct: 144 PEGIQW---EISEISCGENHTVAV 164
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G G LGH +ELLPR V I+ +A G HT A+T G LY W
Sbjct: 160 QVFTWGYGGFGALGHSVYH---RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTW 216
Query: 64 GGCQA-GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G Q G+LGLGP PNE + +P V V+CG T+V ++G++
Sbjct: 217 GRDQGDGRLGLGPNCG-----PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
WG NS + W P P+ + +VR ++A+GG HS LTD
Sbjct: 272 WNWGANSNYELGRGDKVGGWKPQPIP-SLQDVRIIQIASGGYHSLALTD 319
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +WG G GQLGH S+++ + +P + AL + +ACGG + A+T G LY W
Sbjct: 322 KVLSWGYGQHGQLGHSSIEN---QKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMW 378
Query: 64 GGCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G + QLG+ P+T+ P + F + P+ V VA G SH +
Sbjct: 379 GNAKDSQLGVPGLPETQ-----PLPVEVKFLMEDDRLGPHNVLSVAVGASHAM 426
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S +LG G K P+ + +L + I +A GG H+ ALT G + +W
Sbjct: 270 QLWNWGANSNYELGRGDKVGGWK---PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSW 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G Q GQLG S + IP ++ V +ACG S + +G
Sbjct: 327 GYGQHGQLG-------------HSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNG 373
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV---------GEVRKLAAGGGHSAVLTDAC 171
K++ WG N+ P PV+ V +A G H+ C
Sbjct: 374 KLYMWG-NAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHA-----MC 427
Query: 172 SLKELCEFRLAESVTLSNASEIEDVA 197
+ LC F L +++L I A
Sbjct: 428 LVSSLCLFHLLPNLSLYMDESIASAA 453
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 46/198 (23%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-----------------------D 37
+ + +WG G+ GQLG G +E L P V L
Sbjct: 35 VQLLSWGRGASGQLG-----GGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENAS 89
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
G+ ++CG H+ +L G L+ WG G+LG G + +F N + R+
Sbjct: 90 GLTEVGISCGLFHS-SLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRS---- 144
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVR 155
A G H++ G++ WGY +G + P V+ W ++R
Sbjct: 145 --------TALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNA-KIR 195
Query: 156 KLAAGGGHSAVLTDACSL 173
+A G H+A +T++ L
Sbjct: 196 HIATAGTHTAAITESGEL 213
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T+G G G+LGH S ++ + + R V AL G +K VACGG HT A+T G +Y W
Sbjct: 211 EVFTFGEGKFGRLGHNSERN---QPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTW 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG + GQLG G + +P ++ + V + CG SHT+ G+++
Sbjct: 268 GGGEHGQLGHGDKVN--KTVPTRVESLLEKL--------VLQITCGWSHTVTLTDTGEVY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL---KELCEF 179
WG +G+ + + P PVD G+ V +A+ H+ L D ++ L
Sbjct: 318 TWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVDPVAMLRASMLTSS 377
Query: 180 RLAESVTLSNASEIEDVA 197
+ + L +++E DV
Sbjct: 378 YVGDMRQLIDSAEFSDVT 395
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G G+LGH GD + +PR V L G I+ V CG HT A+T G LY
Sbjct: 54 EVYTWGRGDDGRLGH-----GDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLY 108
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LG G +T S Y + V+ VACG HT+V + +
Sbjct: 109 TWGGGMYGKLGHGNET-------GHSTPYLVET---LKSMQVRQVACGSRHTVVLLENKD 158
Query: 122 IHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
++ WG G + + + + + P PV+ G+ + +++A G H+A L++
Sbjct: 159 VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSE 208
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y+WG G GQLG L + P + AL I +ACG HT LT +G +Y
Sbjct: 1 MTVYSWGRGEDGQLG---LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYT 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G + F+P R + L N ++ V CG HT G +
Sbjct: 58 WGRGDDGRLGHGDN--GWKFVP-------RLVEELRGKN-IRQVTCGSYHTAAVTVSGDL 107
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG YG+ + T P V+ +VR++A G H+ VL +
Sbjct: 108 YTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLE 155
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G GH + + LP V L G I ++ G HT AL+ G ++ +
Sbjct: 158 DVYTWGDKENGVSGHGDTEG--HQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTF 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-----VQLVACGHSHTLVYMR 118
G + G+LG + RN P+ + V+ VACG HT
Sbjct: 216 GEGKFGRLGHNSE---------------RNQPVARFVDALAGKRVKQVACGGFHTAAVTE 260
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G+++ WG +GQ + P+ V+ + + V ++ G H+ LTD
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDT 313
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + L+P+ ++AL G+ IK +ACG H A+T +G + +W
Sbjct: 87 ELYSWGWGDFGRLGHGN---SSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSW 143
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG S +P + F+ +PI ++VA G H++ +G+++
Sbjct: 144 GRNQNGQLGLG--NTEDSLVPQKIQA-FKGVPI-------KMVAAGAEHSVAITENGELY 193
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
GWG+ YG W P V
Sbjct: 194 GWGWGRYGNLGLGDRNDRWNPEKV 217
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+ +WG G GQLGH D LP ++ ALD I +ACG HT A + S+ LY+W
Sbjct: 35 VCSWGRGEDGQLGHGDT---DDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSW 91
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G N SD I + ++ +ACG SH L +G++
Sbjct: 92 GWGDFGRLGHG----------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQ 141
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG HS +T+ L
Sbjct: 142 SWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGEL 192
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYT+G GQLGH + + L+P+++ AL I V+ G H+ ALTS G L+ WG
Sbjct: 244 IYTYGWSKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWG 300
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G+G S + + R + I +CG HT+ +
Sbjct: 301 WNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQI----------SCGWRHTIAVTEKENVFS 350
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 351 WGRGTNGQ 358
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + P +V ++D + VACG HT +++S G +Y +
Sbjct: 191 ELYGWGWGRYGNLG---LGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTY 247
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G S +P + + + V+ G H++ G +
Sbjct: 248 GWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLF 297
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 298 GWGWNKFGQ 306
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G HT AL S + +WG + GQLG G DT R +P +
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-------------DTDDRPLPTQLSALDA 65
Query: 104 Q---LVACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
Q +ACG HTL Y +++ WG+ +G+ + S+ P P+ G ++++A
Sbjct: 66 QHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA 125
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 126 CGDSHCLAVT 135
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 28/100 (28%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++ WG GQ+G HCS P +V + ++CG HT A+T K
Sbjct: 296 LFGWGWNKFGQVGVGDNLDHCS---------PVQVKFPQDQRVVQISCGWRHTIAVTEKE 346
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+++WG GQLG G DT RN P ++
Sbjct: 347 NVFSWGRGTNGQLGHG-------------DTIDRNSPKII 373
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 94/211 (44%), Gaps = 47/211 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++G G LGH D E P+R+ AL GI I VA GG H AL+ +G ++AW
Sbjct: 311 QVWSFGWNDRGTLGHGHR---DVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGTMFAW 367
Query: 64 GGCQAGQ------------------LGLGPQTR----------SFSFIP---------NE 86
GG + GQ LGLGP R S + + N
Sbjct: 368 GGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALLEDGMVWQWGENW 427
Query: 87 SDTYFRNI----PILVVPN--GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
D R + P+ V P+ GV V+CG H L G++ WG N YGQ N +TY
Sbjct: 428 GDFSMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMNDYGQLGNGSTTY 487
Query: 141 AWYPSPV-DWCVGEVRKLAAGGGHSAVLTDA 170
A P PV D V +AAGG HS L+ A
Sbjct: 488 ATTPRPVLDMEGVVVADIAAGGWHSCALSSA 518
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG+ GQLG+ S PR V+ ++G+ + D+A GG H+CAL+S G ++ WG
Sbjct: 469 VLSWGMNDYGQLGNGSTTYATT---PRPVLDMEGVVVADIAAGGWHSCALSSAGEVWVWG 525
Query: 65 GCQAGQLGLGPQTRSFSFIPNE 86
+ G+LGLG ++ S P +
Sbjct: 526 RGEYGRLGLGDRSGSSKLRPQK 547
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK-------DVACGGVHTCALTSK 57
++ WG+ GQLG ++ + + P+ V AL G+ I + G +T AL +
Sbjct: 253 VFGWGVSEDGQLG---VEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 115
G ++++G G LG G + + +T + IP L G+++V A G H L
Sbjct: 310 GQVWSFGWNDRGTLGHGHR---------DVETKPKRIPAL---KGIRIVQVAIGGWHCLA 357
Query: 116 YMRDGKIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLTD 169
G + WG N YGQ + P PVD +G VR+++AGG HS L +
Sbjct: 358 LSDRGTMFAWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALLE 416
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 24 GDKELLPRRV-----VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
GD + P R V D + V+CG H ALT++G + +WG GQLG
Sbjct: 428 GDFSMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMNDYGQLG------ 481
Query: 79 SFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
N S TY ++ GV + +A G H+ G++ WG YG+
Sbjct: 482 ------NGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSAGEVWVWGRGEYGR 531
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 94/226 (41%), Gaps = 65/226 (28%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G+ G+LGH ++G +P +V LDG+ VACG VHT ALT G ++AWG
Sbjct: 124 VWTWGRGTFGRLGHEVHETG----IPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWG 179
Query: 65 ----GC-----------------------------------------------QAGQLGL 73
GC GQLGL
Sbjct: 180 NNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL 239
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
G R S P T RN+PI+ +ACG H L G+++ WG GQ
Sbjct: 240 GQGARYISQ-PTRIRT-LRNVPIV-------QIACGQYHMLALSAAGEVYAWGQGLQGQT 290
Query: 134 ANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDACSLKELCE 178
ANEK P +D V+ +AAGG HSAV+ D L + E
Sbjct: 291 ANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQLG L G + + P R+ L + I +ACG H AL++ G +YA
Sbjct: 225 EVYTWGADNYGQLG---LGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYA 281
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GL QT + + DT ++ + + V+++A G SH+ V G++
Sbjct: 282 WG------QGLQGQTAN----EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRL 331
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G GQLG + + + E LP+ +D A G T A+T G L+ +G
Sbjct: 16 LYTWGSGQFGQLG---IGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFG 72
Query: 65 GCQAGQLGLGPQTR-SFSFIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGK 121
+ QLG G S +P E + F +G+ +V C H DG
Sbjct: 73 QGDSNQLGHGDTGDCSNQVLPREVEDAF---------DGLSVVNCSICDGHMAAVTEDGS 123
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG ++G+ +E P V G K+A G H+ LTD
Sbjct: 124 VWTWGRGTFGRLGHEVHETG-IPEKVPGLDGMRFVKVACGHVHTLALTD 171
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T + +P RNI L VQ +ACG+ H+L + ++
Sbjct: 110 LDTDGQLGL-PGTEEYIKVP-------RNIKSLTDIQIVQ-IACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ KS A P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKHGQLGLGFELKSQSA--PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG GQLG L+S P+ + +L GI VA GG H+ LT GA++
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGL +E+D + N+ + + + CG HT ++G +
Sbjct: 214 WGRNKFGQLGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T + +P RNI L VQ +ACG+ H+L + ++
Sbjct: 110 LDTDGQLGL-PGTEEYIKVP-------RNIKSLTDIQIVQ-IACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ KS A P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKHGQLGLGFELKSQSA--PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG GQLG L+S P+ + +L GI VA GG H+ LT GA++
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGL +E+D + N+ + + + CG HT ++G +
Sbjct: 214 WGRNKFGQLGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P +SD + + VQ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EKS
Sbjct: 56 YTCGCNDLGQLGHEKS 71
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T+G G G+LGH S ++ + + R V AL G +K VACGG HT A+T G +Y W
Sbjct: 211 EVFTFGEGKFGRLGHNSERN---QPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTW 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG + GQLG G + +P ++ + V + CG SHT+ G+++
Sbjct: 268 GGGEHGQLGHGDKVN--KTVPTRVESLVEKL--------VVQITCGWSHTVALTDTGEVY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL---KELCEF 179
WG +G+ + +T P VD G+ V +A+ H+ L D ++ L
Sbjct: 318 TWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPVAMLRASMLTSS 377
Query: 180 RLAESVTLSNASEIEDVA 197
+ + L +++E DV
Sbjct: 378 YVGDMRQLIDSAEFSDVT 395
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 25/173 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G G+LGH GD + +PR V L G I+ V CG HT A+T G LY
Sbjct: 54 EVYTWGRGDDGRLGH-----GDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLY 108
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMR 118
WGG G+LG G +T + P LV G+Q+ VACG HT+V +
Sbjct: 109 TWGGGMYGKLGHGNETG-------------HSTPFLVETLKGMQVRQVACGSRHTVVLLE 155
Query: 119 DGKIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ ++ WG G + + + + + P PV+ G+ + +++A G H+A L++
Sbjct: 156 NKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSE 208
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y+WG G GQLG L + P + AL I +ACG HT LT +G +Y
Sbjct: 1 MTVYSWGRGEDGQLG---LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYT 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G + F+P R + L N ++ V CG HT G +
Sbjct: 58 WGRGDDGRLGHGDN--GWKFVP-------RLVEELRGKN-IRQVTCGSYHTAAVTVSGDL 107
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG YG+ + T P V+ G +VR++A G H+ VL +
Sbjct: 108 YTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLE 155
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G GH + + LP V L G I ++ G HT AL+ G ++ +
Sbjct: 158 DVYTWGDKENGVSGHGDTEG--HQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTF 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-----LVVPNGVQLVACGHSHTLVYMR 118
G + G+LG + RN P+ + V+ VACG HT
Sbjct: 216 GEGKFGRLGHNSE---------------RNQPVARFVEALAGKRVKQVACGGFHTAAVTE 260
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G+++ WG +GQ + P+ V+ V + V ++ G H+ LTD
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDT 313
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L++YTWG G+ G+LGH + + +K+ P+ + LD I V+CG HT A+T +G +YA
Sbjct: 415 LNLYTWGTGTYGRLGH-GMDTSEKK--PKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYA 471
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--------NGVQLVACGHSHTL 114
+G + G+LG+ + R F E ++++ + V P N L A G++H+L
Sbjct: 472 FGQGKYGKLGINRKQREGVFSRPEKISFYK---VGVEPQEMLVQDKNEAILAAAGYNHSL 528
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
+ GKI+ WGYN G +K P + GE+
Sbjct: 529 CLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGEL 568
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG---IFIKDVACGGVHTCALTSKGAL 60
++++WG G G LG + D PR ++ FI+ +ACG H+ LT K +
Sbjct: 309 ELFSWGSGQYGALG---FGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKI 365
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG Q G+LG G + +P E + PI ++ G SH+
Sbjct: 366 LTWGQGQGGRLGHGDEDD--VLVPKEIYDLSKKKPI--------FISAGESHSAAISEKL 415
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLT 168
++ WG +YG+ + T P + D E+ ++ G H+ +T
Sbjct: 416 NLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAIT 464
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS----FIPNESDTYFRNIPI 96
I VACG H A+T L++WG Q G LG G + F I + TYF
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYF----- 345
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVR 155
++ +ACG H++ R KI WG G+ + P + D +
Sbjct: 346 ------IEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPI 399
Query: 156 KLAAGGGHSAVLTDACSL 173
++AG HSA +++ +L
Sbjct: 400 FISAGESHSAAISEKLNL 417
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 41/219 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + E R +A I + +ACG ++ A+++ G L+
Sbjct: 688 ELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNI--QMIACGDNYSAAVSAFGELFVT 745
Query: 64 GGCQAGQLGLGPQTR-----SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-- 116
G + G+LGLG + SF+ I N + P ++ VACG +H L
Sbjct: 746 GNLENGKLGLGQALKKGFLLSFTLIQN------------LAP--IKSVACGPNHMLAIAD 791
Query: 117 ------MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++DG + WG N GQ + P + +K+A G S LT
Sbjct: 792 YNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFKKVACGQDFSIGLTYG 851
Query: 171 CSL------KELCEFRLAESVTLSN------ASEIEDVA 197
+ K C+ ++ + V + ++I+D+A
Sbjct: 852 NQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIA 890
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 42/167 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK---------------------- 42
IY+WG G LG Q G +E LP + + G I
Sbjct: 536 IYSWGYNGKGLLGR---QKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSY 592
Query: 43 ---DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF----------SFIPNESDT 89
VACG ++T +LT+ G +Y +G GQL +F + +++
Sbjct: 593 EVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALD 652
Query: 90 YFRNIPILVVPNG----VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ ++ P + +ACG H R ++ GWG N GQ
Sbjct: 653 SSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQ 699
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I +ACGG H A++ L+ WG GQLGLG F+ P T R I
Sbjct: 670 INYIACGGEHIFAISRMNELFGWGRNDEGQLGLG-FVSDFTAEP----TLIRQI----AH 720
Query: 101 NGVQLVACGHSHT 113
+Q++ACG +++
Sbjct: 721 KNIQMIACGDNYS 733
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 33/163 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV------VALDGIFIKD------VACGGVHTC 52
+Y +G G G+LG Q P ++ V + ++D A G H+
Sbjct: 469 VYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSL 528
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFS--------FIPNESDTYFRNIPILVVPNGVQ 104
L G +Y+WG G LG + + F IP E NI L+ ++
Sbjct: 529 CLAKSGKIYSWGYNGKGLLG---RQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLK 585
Query: 105 L----------VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
VACG +T+ G+++ +G N+YGQ A +K
Sbjct: 586 QEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDK 628
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H D+Y+WG G G+LGH + S D P+ + L G+ IK +ACG H A+T +G +
Sbjct: 85 HTDVYSWGWGDFGRLGHGN--SSDL-FTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQ 141
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q GQLGLG T S +P + F+ +PI ++VA G HT DG+
Sbjct: 142 SWGRNQNGQLGLG--TTEDSLVPQKIQA-FQGVPI-------KMVAAGAEHTAAVTEDGE 191
Query: 122 IHGWGYNSYG 131
++GWG+ YG
Sbjct: 192 LYGWGWGRYG 201
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG GQLG L + + L+P+++ A G+ IK VA G HT A+T G L
Sbjct: 136 MEGQVQSWGRNQNGQLG---LGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGEL 192
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--LVACGHSHTLVYMR 118
Y WG + G LGLG R +P + + +P+G + +VACG HT+
Sbjct: 193 YGWGWGRYGNLGLG--DRKDRLVPEK----------VSLPHGEKMVMVACGWRHTISVSS 240
Query: 119 DGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 SGGLYTYGWSKYGQ 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YT+G GQLGH GD L+P ++ AL G FI ++ G HT A+TS G LY
Sbjct: 244 LYTYGWSKYGQLGH-----GDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYG 298
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + GQ+G+G D R+ P+ V + V L++CG HTL
Sbjct: 299 WGWNKFGQVGVG-------------DNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTER 345
Query: 120 GKIHGWGYNSYGQAANEKST 139
+ WG + GQ N + T
Sbjct: 346 QNVFSWGRGTNGQLGNGECT 365
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAWGG 65
TWG G GQLGH Q L P + L+G+ I V CG HT A + S +Y+WG
Sbjct: 37 TWGRGEDGQLGHGDAQ---DRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGW 93
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G + F+ P R + L + +ACG SH L +G++ W
Sbjct: 94 GDFGRLGHGNSSDLFTPQP------IRQLHGLKIKQ----IACGDSHCLAVTMEGQVQSW 143
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 144 GRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGEL 192
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP-ILVVPNG 102
++ G H+ AL S + WG + GQLG G D R P IL G
Sbjct: 19 ISAGASHSVALLSGNVVCTWGRGEDGQLGHG-------------DAQDRLSPTILSTLEG 65
Query: 103 VQLVA--CGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
+++++ CG HT+ Y ++ WG+ +G+ + S+ + P P+ G +++++A
Sbjct: 66 LEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA 125
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 126 CGDSHCLAVT 135
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+YTWGLG GQLGH +++S L P++V A L+GI + V+CG T L LY
Sbjct: 277 DLYTWGLGVFGQLGHSNVKS---YLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILY 333
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP----NGVQLVACGHSHTLVYM 117
A+G + QLG +T+ D +F+ VV ++ V CGH HTL
Sbjct: 334 AFGHGEYAQLGATEETQHLDM--GSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALT 391
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
D +++ WG+ S G + P V G E+ ++AG HS ++
Sbjct: 392 EDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISCISAGEKHSLIV 442
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
I+TWG GQLG H S P+ V L + I V+CG H A+T G LY
Sbjct: 226 IFTWGFNEKGQLGLKHRWFNSS-----PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYT 280
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
WG GQLG + S++ + F NG+Q+ V+CG + T+V R+
Sbjct: 281 WGLGVFGQLG---HSNVKSYLHPKKVAAFS-------LNGIQVSQVSCGSNFTMVLGRNQ 330
Query: 121 KIHGWGYNSYGQAANEKST 139
++ +G+ Y Q + T
Sbjct: 331 ILYAFGHGEYAQLGATEET 349
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ + + G GQLG +++ + L P+ + +L G I + G H ++ G +Y+
Sbjct: 1 MSVISVGNNKNGQLG---IENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYS 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG+ P+ FS PN T ++ V VACG+ H+L G++
Sbjct: 58 WGRGKEGQLGV-PEKMLFSTKPNLIKT--------LLHERVVKVACGNFHSLALTDQGRV 108
Query: 123 HGWG 126
+ WG
Sbjct: 109 YEWG 112
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELL---PRRVVALDGIFIKDVACGGVHTCALT 55
+Y +G G QLG H + S D P+ V AL+ IK V CG +HT ALT
Sbjct: 332 LYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALT 391
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+Y WG +G LGL ++ F +P + + + ++ G H+L+
Sbjct: 392 EDNEVYVWGWGSSGCLGL--NSKRFQLVP--------QLVTSISGEEISCISAGEKHSLI 441
Query: 116 YMRDGKIHGWGYNSYGQAANEK 137
+R + + ++ Y NEK
Sbjct: 442 -VRGSDLTSFAFD-YKGLVNEK 461
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
D++ G + A+T G ++ WG + GQLGL + R F+ P T ++ I+
Sbjct: 209 DISAGWAFSAAVTKSGKIFTWGFNEKGQLGL--KHRWFNSSPQLVKTLL-DVKIVS---- 261
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
V+CG H DG ++ WG +GQ + +P V
Sbjct: 262 ---VSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKV 303
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G GQLGH + + EL P V ++ VACG HT +T G +Y W
Sbjct: 56 DVYTWGRGWEGQLGHDVVT--EIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTW 113
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +AGQLG G S S + +S N+P V +ACG HT+ +G I
Sbjct: 114 GENKAGQLGTGDLKSSNSPVLIDSAL---NLP------SVLSIACGEFHTVAICIEGTIW 164
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLTDA 170
WG N GQ + + ++P+ V VG +K+ A GG H+ VLTDA
Sbjct: 165 SWGRNQCGQLGHGNTKTCYFPTQV---VGMAKKICIRAACGGQHTLVLTDA 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG GQLGH + ++ P +VV + ACGG HT LT +YAWG
Sbjct: 163 IWSWGRNQCGQLGHGNTKTC---YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWG 219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL ++ P+ D R +G V CG+SH++ M++ +I+
Sbjct: 220 SNAYGQLGLNRSDKAV-LQPDIVDHLRR--------SGACHVLCGYSHSMALMKNEQIYT 270
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N GQ T++ P V
Sbjct: 271 WGRNDCGQLGLGHYTHSPVPELV 293
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA---- 59
IYTWG GQLG L +P V AL + ++ +ACG H A +
Sbjct: 267 QIYTWGRNDCGQLG---LGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGM 323
Query: 60 -----LYAWGGCQAGQLG 72
+Y+WG + GQLG
Sbjct: 324 PPLEHVYSWGRGEEGQLG 341
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D +P+ + AL G+ IK +ACG H A+T +G + +
Sbjct: 87 VEVYSWGWGDFGRLGHGN--SSDL-FIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG T S +P + T F+ +PI ++VA G H++ +G++
Sbjct: 144 WGRNQNGQLGLG--TTEDSLVPQKIQT-FQGVPI-------KMVAAGAEHSVAITENGEL 193
Query: 123 HGWGYNSYG 131
+GWG+ YG
Sbjct: 194 YGWGWGRYG 202
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+ +WG G GQLGH D LLP ++ ALD I V CG HT A + SK +Y+W
Sbjct: 36 VCSWGRGEDGQLGHGDT---DDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F P + R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFIPQPIRALQGLR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG HS +T+ L
Sbjct: 143 SWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 193
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P ++ A I V+ G HT ALT+ G LY W
Sbjct: 243 ELYTYGWSKYGQLGHGDCKD---HLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGW 299
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPN--GVQLVACGHSHTLVYMRDG 120
G + GQ+G+G D R P+ V P+ V ++CG HT+
Sbjct: 300 GWNKFGQVGVG-------------DNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKD 346
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
++ WG + GQ + YP ++
Sbjct: 347 NVYSWGRGTNGQLGIGDTIDWNYPKIIE 374
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + +P +V ++D + VACG HT +++S G LY +
Sbjct: 192 ELYGWGWGRYGNLG---LGDRNDRCIPEKV-SVDCDKMVLVACGWRHTISVSSSGELYTY 247
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + + V+ G HT+ G+++
Sbjct: 248 GWSKYGQLGHGDCKD--HLVPHKLQAFSDKL--------ICQVSGGWRHTMALTTGGQLY 297
Query: 124 GWGYNSYGQA 133
GWG+N +GQ
Sbjct: 298 GWGWNKFGQV 307
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PRRV+ ++ GG H+ AL S + +WG + GQLG G DT
Sbjct: 14 PRRVLL--------ISAGGSHSVALISGNVVCSWGRGEDGQLGHG-------------DT 52
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R +P L + Q+V+ CG HTL Y +++ WG+ +G+ + S+ + P
Sbjct: 53 DDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQ 112
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 113 PIRALQGLRIKQIACGDSHCLAVT 136
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T + +P RNI L VQ +ACG+ H+L + ++
Sbjct: 110 LDTDGQLGL-PGTEEYIRVP-------RNIKSLTDIQIVQ-IACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ +S+ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKHGQLGLGFELKRQSS----PQLIKSLLGIPFTQVAAGGAHSFVLT 206
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG QS P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D + N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG +QS + P++V +L+GI + VA GG H+ AL+ G Y W
Sbjct: 146 QVFSWGKNSQGQLG-LGMQSSS-QASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGW 203
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQL L + + S +N+ GV ++CG+ HT V +DG++
Sbjct: 204 GSNSVGQLALSGENSTVQISKPHSIDALKNL-------GVIYISCGYEHTAVLTKDGQVF 256
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ N P V+ G+V K+ G H+
Sbjct: 257 TFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVSKIECGSYHT 297
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + L+P R+ L GI I V+CG H+ AL+ G +++WG
Sbjct: 94 VFAWGAGSEGQLGIGEFK--EINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWG 151
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG Q+ S + + T IP+ VA G SH+ G +G
Sbjct: 152 KNSQGQLGLGMQSSSQA--SPQKVTSLEGIPL-------AQVAAGGSHSFALSLTGTSYG 202
Query: 125 WGYNSYGQAA--NEKSTYAW-YPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ A E ST P +D V ++ G H+AVLT
Sbjct: 203 WGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLT 250
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S+GQLG Q+ ++ P + AL + I V+CG H+ A+ KG ++AWG
Sbjct: 42 VYSCGDNSLGQLGQKREQNTEQ---PEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWG 98
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + + +P T G+++ V+CGH H+L DG++
Sbjct: 99 AGSEGQLGIG-EFKEINLMPMRIKTL----------GGIKIIQVSCGHYHSLALSEDGQV 147
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS GQ +S+ P V G + ++AAGG HS L+
Sbjct: 148 FSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALS 195
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 23/166 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y WG SVGQL S + P + AL + + ++CG HT LT G ++ +G
Sbjct: 201 YGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGD 260
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
+GQL P+ + R P LV + V + CG HT+ Y+ G++
Sbjct: 261 NSSGQLQNNPRGK-------------RRGPQLVEGIKGQVSKIECGSYHTIAYVYTTGQV 307
Query: 123 HGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
G+ ++ +A E S S D +V+ + AG
Sbjct: 308 VSLGHGPRPTSNPTHQKAPAESSDIICLLSAADLVDVKVKDIFAGA 353
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T + +P RNI L VQ +ACG+ H+L + ++
Sbjct: 110 LDTDGQLGL-PGTEEYIRVP-------RNIKSLTDIQIVQ-IACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ +S+ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKHGQLGLGFELKRQSS----PQLIKSLLGIPFTQVAAGGAHSFVLT 206
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG QS P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D + N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG+ S +P +V L + VA GG H+ ALTS G +YAWG
Sbjct: 194 VFAWGKNSSGQLGNNSTVDSS---IPVQVQGLPA-NVTAVAAGGNHSLALTSDGRIYAWG 249
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVA--CGHSHTLVYMRDG 120
+GQLG G + S + P+LV +P G + VA G H+L M+DG
Sbjct: 250 LNSSGQLGDGTTSNS-------------STPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
++ WG NSYGQ N +T + P V + V ++AGG S LT
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVT-GLANVTAVSAGGSDSLALT 343
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + +G + P + + + V+ G H+ ALT G ++AWG
Sbjct: 91 VWAWGDNTNGQLGDGT-TTGRQTPTPAQGLP----SVAQVSAGESHSLALTDDGRVFAWG 145
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G S + + + L + +++VA G +H+L DG++
Sbjct: 146 LNSSGQLGDGTTADSRTPV---------QVQGLATDSTIKVVAAGGNHSLALTSDGRVFA 196
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ N + + P V V +AAGG HS LT
Sbjct: 197 WGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALT 240
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WGL S GQLG + + +L + A G V+ G H+ AL G +YAWG
Sbjct: 245 IYAWGLNSSGQLGDGTTSNSSTPVLVAGLPA--GSKPVAVSAGKDHSLALMQDGTVYAWG 302
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T S +P+ V V V+ G S +L DG ++
Sbjct: 303 GNSYGQLGNGTTTAS-------------EMPVQVTGLANVTAVSAGGSDSLALTSDGYVY 349
Query: 124 GWGYNSYGQ 132
WG NS GQ
Sbjct: 350 AWGLNSSGQ 358
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+ GG H+ LTS ++AWG GQLG G T + P + +P+
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQG-----------LPSVA 123
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGG 161
Q V+ G SH+L DG++ WG NS GQ + + + P V + ++ +AAGG
Sbjct: 124 Q-VSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGG 182
Query: 162 GHSAVLT 168
HS LT
Sbjct: 183 NHSLALT 189
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG S GQLG+ + + + +P +V L + V+ GG + ALTS G +YAWG
Sbjct: 298 VYAWGGNSYGQLGNGTTTASE---MPVQVTGLANV--TAVSAGGSDSLALTSDGYVYAWG 352
Query: 65 GCQAGQLGLG 74
+GQLG G
Sbjct: 353 LNSSGQLGDG 362
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
G V+ G SH+LV D + WG N+ GQ + +T P+P + V +++AG
Sbjct: 71 GEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQ-GLPSVAQVSAGE 129
Query: 162 GHSAVLTD 169
HS LTD
Sbjct: 130 SHSLALTD 137
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y+WG G GQLGH S + L + ++V+ VACG H+ ALT G +Y
Sbjct: 95 ELYSWGHGGYGQLGHTSEEKSKPVLVYMQKKVI--------QVACGSYHSIALTEDGEVY 146
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDG 120
AWG GQLGLG I N T R + ++P+ + V+CG S T++ DG
Sbjct: 147 AWGSNNCGQLGLG--------ISNNQATPKR---VSLIPSKKIVSVSCGQSFTVMLTTDG 195
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDACSL 173
+++ WGYN GQ E +T P V + + K+ G H VLTD L
Sbjct: 196 ELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGEL 250
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG + GQLG L + + P+RV + I V+CG T LT+ G LY+W
Sbjct: 144 EVYAWGSNNCGQLG---LGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSW 200
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG+ T + + + I + + CG +H LV G+++
Sbjct: 201 GYNGNGQLGIENNTNQLQPVRVTGSLFGKFI---------EKIVCGMAHVLVLTDIGELY 251
Query: 124 GWGYNSYGQ 132
WG NSYGQ
Sbjct: 252 SWGANSYGQ 260
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG GQLG +++ +L P RV +L G FI+ + CG H LT G LY+
Sbjct: 196 ELYSWGYNGNGQLG---IENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYS 252
Query: 63 WGGCQAGQLGLGP--QTRSFSFIPNESDTYFRNI 94
WG GQLGLG T + I +D + +I
Sbjct: 253 WGANSYGQLGLGTTHNTSVPTLINTTTDDRWSDI 286
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
D+Y G G LG + G L P+ + L I +A G G H A+T G LY+
Sbjct: 42 DVYALGFNGNGCLG---VGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYS 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG + +S P+LV + V VACG H++ DG+
Sbjct: 99 WGHGGYGQLGHTSEEKS--------------KPVLVYMQKKVIQVACGSYHSIALTEDGE 144
Query: 122 IHGWGYNSYGQ 132
++ WG N+ GQ
Sbjct: 145 VYAWGSNNCGQ 155
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T + +P RNI L VQ +ACG+ H+L + ++
Sbjct: 110 LDTDGQLGL-PGTEEYIRVP-------RNIKSLTDIQIVQ-IACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ +S+ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKHGQLGLGFELKRQSS----PQLIKSLLGIPFTQVAAGGAHSFVLT 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG QS P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D + N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG S GQLG+ Q + L PR V L + +ACG H AL + GALYAWG
Sbjct: 122 VYMWGSNSKGQLGNGEGQ--ESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWG 179
Query: 65 GCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
GQLG+G PQ +P E T +P+ +ACG +H++V + G
Sbjct: 180 DNGNGQLGIGTVGEPQR-----VPVEV-TNLLGLPL-------SQIACGANHSMVLSKSG 226
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
I WG N +GQ + +P+ + + V+ +AAGG HSA LT
Sbjct: 227 VIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALT 275
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P V AL + I V CG H+ ALT G +Y WG GQLG G ES
Sbjct: 92 PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEG--------QESRL 143
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVD 148
R + L P V +ACG +H L + +G ++ WG N GQ P V
Sbjct: 144 SPRFVKTL-APFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVT 202
Query: 149 WCVG-EVRKLAAGGGHSAVLTDA 170
+G + ++A G HS VL+ +
Sbjct: 203 NLLGLPLSQIACGANHSMVLSKS 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+PR + L+GI ++ +A G HT LTS G + + G QLG + S E
Sbjct: 41 VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLG-----QEVSTTKPEPV 95
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
T + + I+ V CG H++ G+++ WG NS GQ N
Sbjct: 96 TALQCLRIVQ-------VCCGQQHSMALTEAGQVYMWGSNSKGQLGN 135
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
+G +G+LGLG +P R+IP L G+++ +A G HTLV G
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVP-------RSIPQL---EGIRVRQIATGAHHTLVLTSHG 70
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ G N + Q E ST P C+ + ++ G HS LT+A
Sbjct: 71 RVLSCGSNDHDQLGQEVSTTKPEPVTALQCL-RIVQVCCGQQHSMALTEA 119
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L P + L +K +A GG H+ ALT+ G ++ +G
Sbjct: 228 IFVWGSNRFGQLG---LSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 86.7 bits (213), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 23/143 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQS--GDK-----ELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+Y+WG G+ GQLGH S D+ + +PR V AL + +CG VHT LT +
Sbjct: 168 LYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQ 227
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACG 109
G +Y +GG GQLG G + S +P + D+ P + VP ++ ++CG
Sbjct: 228 GEIYCFGGGSCGQLGFG----NISQMPLDVDS----CPFMPVPKKIESLQGIFIVSLSCG 279
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQ 132
SH++ R+G ++ WG +YGQ
Sbjct: 280 DSHSMALSREGHVYAWGEATYGQ 302
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVACGGVHTCALTS 56
+IY +G GS GQLG ++ ++ +P+++ +L GIFI ++CG H+ AL+
Sbjct: 229 EIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSR 288
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY-FRNIPILVVP---NGVQLVACGHSH 112
+G +YAWG GQLGL +P +D ++ P VV + ++CG +H
Sbjct: 289 EGHVYAWGEATYGQLGLD----DIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETH 344
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL G ++ +G N+ GQ
Sbjct: 345 TLALTEGGHLYSFGGNTCGQ 364
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVACGGVHTCALTS 56
++Y+WG + GQLG S++ ++ PR + L + + +ACG HT ALT
Sbjct: 43 NVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQ 102
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESD-TYFRNIP--ILVVPN-GVQLVACGHSH 112
G LY+WGG P T S +P + D ++ P I+V+ N V+ VACG +H
Sbjct: 103 DGKLYSWGG-GGCGQLGHPDT---SAMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAH 158
Query: 113 TLVYMRDGKIHGWGYNSYGQAAN-EKSTYA----WYP-SPVDWCVGEVRKL-----AAGG 161
T+ + +G ++ WG + GQ + + S++ YP P+ CV ++ + G
Sbjct: 159 TVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGD 218
Query: 162 GHSAVLTD 169
H+ VLTD
Sbjct: 219 VHTMVLTD 226
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I VA G HT A+ KG +Y+WG GQLGL S +P + + Y P P
Sbjct: 25 IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLA----SMKDLPTDVEGY----PYQPTP 76
Query: 101 NGVQL--------VACGHSHTLVYMRDGKIHGW 125
++L +ACG +HT+ +DGK++ W
Sbjct: 77 RIIELLQSVKVIQIACGDAHTVALTQDGKLYSW 109
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK-------ELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+Y WG + GQLG ++ K + P++VVAL I ++CG HT ALT
Sbjct: 292 VYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEG 351
Query: 58 GALYAWGGCQAGQLG 72
G LY++GG GQLG
Sbjct: 352 GHLYSFGGNTCGQLG 366
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 86.7 bits (213), Expect = 7e-15, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCAL--TSKGAL 60
++TWG G G+LGH GD+E + P++VVAL I +K V CGG T AL T+ L
Sbjct: 150 LFTWGEGQYGRLGH-----GDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGL 204
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMR 118
Y WG + GQLG G F+ +P + VP +LVA G S V
Sbjct: 205 YTWGNNEFGQLGRGDCGDDFTCLPES----------VAVPGAKRLVALDAGASRAAVIDS 254
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
G + WG +G+ + + + P+ V G V +A GGGHS LT A L
Sbjct: 255 SGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGEL 310
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 25/179 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G GQLGH S QS ++L P+++ +D I ++ GG H+ A G++YA
Sbjct: 309 ELFSWGRGENGQLGHGSYQS--QQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYA 366
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG G LG G +SD NIP +++P G++ ++CG HT+ D
Sbjct: 367 WGMSDYGILGTG-----------DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSD 415
Query: 120 GKIHGWGYNSYGQAA--NEKSTYAWYP------SPVDWCVGEVRKLAAGGGHSAVLTDA 170
I+ WG G+ NEK+ A PV + GE+ + G ++ V T +
Sbjct: 416 NTIYSWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFSAGEISTIVIGKKNTVVATSS 474
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG G G+LGH GD E P V +L G + VA GG H+ ALT G L++
Sbjct: 258 LFTWGRGDHGRLGH-----GDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFS 312
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG G +S P + +F ++P ++ ++ G H++ + DG +
Sbjct: 313 WGRGENGQLGHG-SYQSQQLAPKQLQ-FFVDMPKIIG------ISAGGYHSVAQLDDGSV 364
Query: 123 HGWGYNSYG 131
+ WG + YG
Sbjct: 365 YAWGMSDYG 373
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG+ G LG G + P+R++ GI K ++CG HT ALTS +Y+WG
Sbjct: 364 VYAWGMSDYGILGTGDSDDGAINI-PQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWG 422
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G+LG + + I Y P++ + + G +T+V G
Sbjct: 423 CGLGGRLGTFNEKNQCAPIACNIPNY---QPVVFSAGEISTIVIGKKNTVVATSSG 475
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++++G S GQLG +Q ++ P+R+ AL+ + + V+CG H+ A+ KG ++AW
Sbjct: 43 ELHSYGDNSHGQLGRRDVQRQEQ---PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAW 99
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG+G + + IP R I L +Q V+CGH H+L DG++
Sbjct: 100 GAGSEGQLGIG-EFNEINLIP-------RKIKTLTDIKIIQ-VSCGHHHSLALSEDGRLF 150
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V + G + ++AAGG HS L+
Sbjct: 151 TWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALS 197
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 5 IYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++TWG S GQLG C Q+ P+RV LDGI + VA GG H+ AL+ GA +
Sbjct: 149 LFTWGSNSHGQLGLGKECPSQAS-----PQRVQFLDGIPLTQVAAGGAHSFALSLSGASF 203
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----------GVQLVACGHS 111
WG GQL L +N+P++ GV ++CG+
Sbjct: 204 GWGSNSEGQLALRK----------------KNVPVVQSSKPCSVDALENLGVVYISCGYE 247
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
HT V + GK+ +G NSYGQ + P V+ G V ++ G H+
Sbjct: 248 HTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVSQIDCGSYHT 300
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y+WG G G+LGH GD L+P + AL G+ I+ +ACG H A+T +
Sbjct: 87 DVYSWGWGDFGRLGH-----GDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVL 141
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q G+LGLG T S +P + F IPI ++VA G H++ +DG
Sbjct: 142 SWGRNQNGELGLG--TAEDSLLPQKIQI-FEEIPI-------KMVAAGAEHSVAITKDGN 191
Query: 122 IHGWGYNSYGQ 132
++GWG+ YG
Sbjct: 192 LYGWGWGRYGN 202
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G G GQLGH + L+PR+V AL FI V+ G H+ ALTS G L WG
Sbjct: 243 LYTNGWGKYGQLGHGDFED---HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWG 299
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G+G S + N P VQ+++CG HT+ ++
Sbjct: 300 WNKFGQIGVGNNFDCCSPMQ-------VNFP---HDQKVQMISCGWRHTIAVTERENVYS 349
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD 148
WG + GQ N ++ P+ ++
Sbjct: 350 WGRGANGQLGNGETIDRNVPTIIE 373
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG G+LG L + + LLP+++ + I IK VA G H+ A+T G L
Sbjct: 136 MDSQVLSWGRNQNGELG---LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNL 192
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + + V + + +VACG HT+ G
Sbjct: 193 YGWGWGRYGNLGLG--DRNDRLLPEK---------VTVDGDKMAMVACGWRHTICVSSSG 241
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
++ G+ YGQ + P V + + +++ G HS LT + L
Sbjct: 242 GLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQL 295
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+ +WG G GQLGH D L P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 35 VCSWGRGEDGQLGHGDT---DDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSW 91
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G G+LG G S IP+ PI + +Q +ACG SH L D ++
Sbjct: 92 GWGDFGRLGHG--DHSDLLIPH---------PIKALQGLMIQQIACGDSHCLAVTMDSQV 140
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTDACSL 173
WG N G+ + + P + + ++ +AAG HS +T +L
Sbjct: 141 LSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNL 192
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PRRV+ V+ G H+ AL S + +WG + GQLG G + D
Sbjct: 13 PRRVLL--------VSAGASHSVALLSGNVVCSWGRGEDGQLGHG----------DTDDR 54
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGK-IHGWGYNSYGQAANEKSTYAWYPSPVD 148
F + + V CG HT+ G+ ++ WG+ +G+ + + P P+
Sbjct: 55 LFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIK 114
Query: 149 WCVG-EVRKLAAGGGHSAVLT 168
G ++++A G H +T
Sbjct: 115 ALQGLMIQQIACGDSHCLAVT 135
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 14/162 (8%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G S GQLG G++ P R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 20 GDNSRGQLGRKGTPRGEQ---PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASE 76
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYN 128
GQLG+G + + +FIP + T +I I+ VACGH H+L DG++ WG N
Sbjct: 77 GQLGIG-ELKETTFIPKKIKT-LADIKIIQ-------VACGHYHSLALSEDGQVFSWGKN 127
Query: 129 SYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
S+GQ K + P V G + ++AAGG HS L+
Sbjct: 128 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 169
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 121 VFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWG 178
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
AGQL L R P+LV V ++CG+ HT V +DGK
Sbjct: 179 SNNAGQLALSGNNAPVQ----------RYKPVLVGALKTLSVVFISCGYEHTAVLTQDGK 228
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+ +G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 229 VFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHT 271
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS GQLGH + ++ + P+ + AL+G+ + +A GG H+ ++++ G LY WG
Sbjct: 185 VFSWGNGSRGQLGHGTTEASNT---PQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWG 241
Query: 65 GCQAGQLGL-------GPQTRSFSFIP------NESDTYFRNIPILV-VPNG--VQLVAC 108
+AGQLGL GP S N ++ + P +V +P G V V+C
Sbjct: 242 WNEAGQLGLPTSKHKTGPSDHKPSISEMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSC 301
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
G HT RDG++ WG+ +YGQ N ++ P V++
Sbjct: 302 GSRHTAALTRDGQLLTWGWGAYGQLGNGQTERCEVPRAVEF 342
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQ 70
G + LG +QS + LP + G +K V CG H+ ALT G +++WG GQ
Sbjct: 142 GDITMLG--DVQSTNPTPLPVYL----GEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQ 195
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIP-ILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGY 127
LG G T N P ++ GV +V A G H++ G ++ WG+
Sbjct: 196 LGHG-------------TTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGW 242
Query: 128 NSYGQAANEKSTYAWYPS 145
N GQ S + PS
Sbjct: 243 NEAGQLGLPTSKHKTGPS 260
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 22/133 (16%)
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
DG+ DV CG ALT G + G Q+ T +P+
Sbjct: 121 DGVKFTDVVCGESTILALTDTGDITMLGDVQS--------------------TNPTPLPV 160
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 155
+ V+ V CG H+L G++ WG S GQ + + + P ++ G +
Sbjct: 161 YL-GEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGVTMV 219
Query: 156 KLAAGGGHSAVLT 168
+AAGG HS ++
Sbjct: 220 TIAAGGWHSVSVS 232
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P +V ALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKR--PEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL T ++ +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 FAVDGQLGLS-GTEEYTRVP-------RNIKSLSDIQIVQ-VACGYFHSLALSKGSEVFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P+ + +L GI +A GG H+ LT GA++ W
Sbjct: 157 EVFSWGQNKYGQLGLGY--EYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D Y N+ + + ++CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + + + P V +G V ++A G H++ +
Sbjct: 265 TFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPS 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIP 84
G GQLG+G + S P
Sbjct: 320 GLGGNGQLGMGTTSNRKSPFP 340
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P ++F N VQ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRC-SFFVN-------KKVQDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EKS
Sbjct: 56 YTCGCNDLGQLGHEKS 71
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 87 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F IPI ++VA G HT DG +
Sbjct: 144 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIPI-------KMVAAGAEHTAAVTEDGDL 193
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 194 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 232
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 137 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDL 193
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 194 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 240
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 YSGALYTYGWSKYGQ 255
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 38 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDL 193
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 245 LYTYGWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 302 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 14 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 52
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 53 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 112
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 113 PIKALHGIRIKQIACGDSHCLAVT 136
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 47/213 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+WG GS GQLG +L S + P+++ L I ++CG H+ AL+ G +++WG
Sbjct: 105 IYSWGDGSEGQLGTGNLSS--RNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWG 162
Query: 65 GCQAGQLGLGPQ---------TRSFSFIP--------------------------NESDT 89
+ GQLGLG Q +S IP N
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQL 222
Query: 90 YFRNIPI--LVVPN--------GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
F++ P+ P+ GV ++CG HT V +DG ++ +G +++GQ
Sbjct: 223 GFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGN 282
Query: 140 YAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACS 172
P ++ G+V ++A G H+ + +C+
Sbjct: 283 QTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCN 315
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G GQLG S S ++ + +L+ I D++CG H+ A++ +G++Y+WG
Sbjct: 59 GQNPYGQLGRKSNNSSIEQ-----ISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSE 113
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYN 128
GQLG G S +F P + F N I+ ++CG+ H+L DG++ WG N
Sbjct: 114 GQLGTG-NLSSRNFTPKKITGLF-NTKII-------QISCGNFHSLALSEDGRVFSWGQN 164
Query: 129 SYGQ 132
GQ
Sbjct: 165 KCGQ 168
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHTCALTSKGA 59
+Y WG GQL +L G+KE++ + + F ++ V+CG HT L G
Sbjct: 1 MYCWGDNCFGQL---ALLQGEKEVVHFKE---NDYFQSQECVQKVSCGEKHTLYLLEDGT 54
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPN-ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L + G GQLG S I + E+ T + ++CG +H++
Sbjct: 55 LLSCGQNPYGQLGRKSNNSSIEQISSLEAQT-------------IVDISCGTNHSVAVSD 101
Query: 119 DGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+G I+ WG S GQ S+ + P + ++ +++ G HS L++
Sbjct: 102 EGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE 154
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG GQL L + + + + YF++ VQ V+CG HTL + D
Sbjct: 1 MYCWGDNCFGQLALLQGEKEV--VHFKENDYFQS------QECVQKVSCGEKHTLYLLED 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
G + G N YGQ KS + + ++ G HS ++D S+
Sbjct: 53 GTLLSCGQNPYGQLG-RKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSI 105
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRR--VVALDGIFIKDVACGGVHTCALTSKGALY 61
D+YTWG GQLGH + G L P R + ++ I ++CG HT A+T++G +Y
Sbjct: 1492 DVYTWGSSHNGQLGHGDMIDGVGSLPPARCETLHMNSNRIASISCGAEHTVAITNEGMVY 1551
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG GQLGLG + + R P+++ + + VACG+ HTL G+
Sbjct: 1552 AWGANGYGQLGLGDTDKR-----TKPTMLSRLEPVVMHESRIIQVACGYFHTLFLTDKGE 1606
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ G+ + GQ ++ A P V + + LAAG HS VLT++ +L
Sbjct: 1607 VWACGWGAQGQLGVGSTSNALLPVHVKILDNKGIVGLAAGFCHSVVLTESGTL 1659
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
LQS LLP + ++ +ACG H + G +Y WG GQLG G
Sbjct: 1461 LQSRAPALLP----PITSPYV--IACGSTH-ASFVYDGDVYTWGSSHNGQLGHGDMIDGV 1513
Query: 81 -SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA------ 133
S P +T N N + ++CG HT+ +G ++ WG N YGQ
Sbjct: 1514 GSLPPARCETLHMN------SNRIASISCGAEHTVAITNEGMVYAWGANGYGQLGLGDTD 1567
Query: 134 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
K T PV + ++A G H+ LTD
Sbjct: 1568 KRTKPTMLSRLEPVVMHESRIIQVACGYFHTLFLTD 1603
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ G G+ GQLG + S LLP V LD I +A G H+ LT G LYA+
Sbjct: 1606 EVWACGWGAQGQLG---VGSTSNALLPVHVKILDNKGIVGLAAGFCHSVVLTESGTLYAF 1662
Query: 64 GGCQAGQLG 72
GG GQLG
Sbjct: 1663 GGNSYGQLG 1671
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P + A D ++ V CG H LTS+G++Y G + GQLG+ R IP
Sbjct: 1834 IPAALAAADEHVVQ-VVCGDWHMLMLTSRGSVYCLGANEHGQLGIN-SLRPRQEIPKRIG 1891
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
+ PI+ + G AC + G+ WG GQ E + A
Sbjct: 1892 AFDHVPPIIALAAGEDFSACVDA-------AGQTWIWGRADNGQLGQESTPNA 1937
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG +G + LP+ + +L I ++CG H+ ALT+ G LY+WG
Sbjct: 105 LFGWGSDSHGQLGF----NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWG 160
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG ++ + T ++ +L +P + +ACG +H+ + G I+G
Sbjct: 161 GNYDGQLGLGMRSEY-----EKQPTLIKS--LLGIP--IAFIACGSNHSFALSKSGAIYG 211
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N+YGQ +P+ + V+ +A G SA L+
Sbjct: 212 WGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLS 256
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++ G + QLGH ++ P +V LD I ++CGG HT A G L+ W
Sbjct: 54 EVFSCGNNDLDQLGHKKQRTK-----PEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG T+ I T+ + ++CG +H+L +G+++
Sbjct: 109 GSDSHGQLGFNGTTQPLPKIIKSLATF-----------HIVQISCGKNHSLALTNNGELY 157
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG N GQ +S Y P+ + +G + +A G HS L+ +
Sbjct: 158 SWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKS 206
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG + GQLG L + +L P ++ L I +K +ACG + L++ G ++ G
Sbjct: 209 IYGWGKNTYGQLG---LNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCG 265
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
GQLG G + S +P R I + ++ + V V+CG HTL
Sbjct: 266 AGMYGQLGHG--STSNEILP-------RKI-MELMGSTVTQVSCGKRHTL 305
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G+LG ++ D+ P + V G HT LT G +++ G
Sbjct: 1 MYCWGSTVHGELGLGGIEH-DQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
QLG Q + E ++R + ++CG +HTL + G++ G
Sbjct: 60 NNDLDQLGHKKQRTKPEKV--EGLDFYR----------ITKISCGGNHTLAFNEWGQLFG 107
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG +S+GQ +T + +++ G HS LT+ L
Sbjct: 108 WGSDSHGQLGFNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGEL 156
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G G+LGH + +SG PRRV AL G+ I D+ACG HT +TSKG LY W
Sbjct: 53 DLYTWGGGMYGKLGHGN-ESGHST--PRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDG 120
G + G G G T + P +L NG VQL ACG HT D
Sbjct: 110 GDKENGVAGHG-DTEGHQYTPK----------LLERLNGKKVVQLSACGF-HTACLTDDH 157
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLT 168
+ WG +G+ N P ++ +G+ ++A GG HSAV+T
Sbjct: 158 ETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVIT 206
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLG D+ P V AL G+ I V CG HT A+ S G LY W
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDE---PTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTW 57
Query: 64 GGCQAGQLGLGPQTRSFSFIPNES-DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GG G+LG G NES + R + LV + V +ACG HT V G +
Sbjct: 58 GGGMYGKLGHG----------NESGHSTPRRVEALVGLSIVD-IACGSRHTAVVTSKGCL 106
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG G A + + + + P ++ G +V +L+A G H+A LTD
Sbjct: 107 YTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 19/123 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ + WG G G+LG+ + ++ PR + +L G + VACGG H+ +T G +Y +
Sbjct: 158 ETFAWGEGKFGRLGNGTERNCHS---PRLIESLIGKYPCQVACGGFHSAVITRDGKMYTF 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDG 120
GG + GQLG +D + P LV +G V+ + CG SH++ +G
Sbjct: 215 GGGEHGQLG-------------HADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEG 261
Query: 121 KIH 123
+ H
Sbjct: 262 EYH 264
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGAL 60
++Y+WGLG GQLGH +++S L P+++ V L+ I VACG T + +G L
Sbjct: 284 EVYSWGLGVFGQLGHGNVKS---YLHPKKIQQFVELNE-RIAQVACGSNFTMVRSVQGLL 339
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFR-NIPILVVP---NGVQLVACGHSHTLVY 116
YA+G + GQLG +T+ F D +F+ +IPI+V ++ VACGH HT+V
Sbjct: 340 YAFGHGEYGQLGSTEETQHLDF--GGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ +++ WG+ S G + P + G E+ + AG H+ V+
Sbjct: 398 TDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHTIVV 449
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GQLG L + P+ V L + I V CG H CA+T +G +Y+WG
Sbjct: 233 LYTWGFNEKGQLG---LGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWG 289
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G +S+ P + + + + VACG + T+V G ++
Sbjct: 290 LGVFGQLGHG-NVKSY-LHPKKIQQFVE------LNERIAQVACGSNFTMVRSVQGLLYA 341
Query: 125 WGYNSYGQAANEKST----------YAWYPSPV---DWCVGEVRKLAAGGGHSAVLTD 169
+G+ YGQ + + T + Y P+ +++ +A G H+ V+TD
Sbjct: 342 FGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTD 399
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 25/144 (17%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKEL---LPRRVVALDGIFIKDVACGGVHTCALT 55
+Y +G G GQLG H D +P V +L+ IK+VACG +HT +T
Sbjct: 339 LYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVT 398
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHT 113
+ +Y WG +G LGLG + F +P ++ +G ++ + G HT
Sbjct: 399 DENEVYQWGWGSSGALGLG--NKRFQLVPQ----------LITSLSGEEIASITAGEKHT 446
Query: 114 LVYMRDGKIHGWGYNSYGQAANEK 137
+V +R + + Y+ Y NEK
Sbjct: 447 IV-VRCSDVTSFAYD-YKSLINEK 468
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ DV+ G + A+T G LY WG + GQLGLG + +F + P LV
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLG-------------NRWFHSTPQLVKT 260
Query: 99 -VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ + V CG H G+++ WG +GQ
Sbjct: 261 LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQ 295
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ + + G GQLGH S+ KE L P + L G I G H+ A++ G +Y
Sbjct: 1 MSVLSVGQSKNGQLGHDSI----KECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVY 56
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+WG + GQLG+G F P L+ + VACG+ H+L
Sbjct: 57 SWGRSKEGQLGIGQG------YGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTD 110
Query: 119 DGKIHGWG 126
GK++ WG
Sbjct: 111 MGKVYEWG 118
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P V ALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LATDGQLGL-PGTEECVRVP-------RNIRSLSEIQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGYEYKKQT---SPQMIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P+ + +L GI +A GG H+ LT GA++ W
Sbjct: 157 EVFSWGQNKYGQLGLG--YEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +++D Y + + V + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++ G H+ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPS 312
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + + CG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG-------PQTRSFSFIP 84
G GQLG G P T S+IP
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTVKGSWIP 347
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P +SD +F N V+ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSD-FFLN-------KRVRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EK+
Sbjct: 56 YTCGCNDLGQLGHEKA 71
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G+LGH +SG +L P++V+ +K+V CGG HT A T G++Y WG
Sbjct: 896 VYTWGRNGSGELGHGD-KSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWG 954
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKIH 123
+ GQLGLG R+ ++P +PI + V +A G++HT+V ++ G++
Sbjct: 955 NGRIGQLGLG--DRTLHWLP---------VPIKTLRKMHVTQLAAGYAHTIVVLKSGEVM 1003
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G GQ P+ + + + + A G H+A+LT+A
Sbjct: 1004 VFGGGEVGQLGTGMRKDLLVPTKLQ-AMPSIVQAACGYCHTALLTEA 1049
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G GQLGH D+ L P+ V L+G I+ +ACG HT A+T +Y W
Sbjct: 1051 EVYTCGSAMSGQLGHADNLQNDR-LAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTW 1109
Query: 64 GGCQAGQL-GLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GG Q G Q R + + + + + + + + LV+CGH+H++ DG++
Sbjct: 1110 GGVQGTDSDGAMRQERKAAILKRVTPSIVKGL----MGKRISLVSCGHAHSVATTMDGEV 1165
Query: 123 HGW 125
+ W
Sbjct: 1166 YVW 1168
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ +V+CG H ALT G +Y WG +G+LG G ++ P + +F++
Sbjct: 877 VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQV-IFFKS------- 928
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 159
V+ V CG HTL G ++GWG GQ T W P P+ V +LAA
Sbjct: 929 KCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAA 988
Query: 160 GGGHSAVL 167
G H+ V+
Sbjct: 989 GYAHTIVV 996
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 4 DIYTWG----LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG S G + + K + P V L G I V+CG H+ A T G
Sbjct: 1105 NVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGE 1164
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNG--------VQLVACG 109
+Y W + Q L + S ++ P+LV +P+G V+ A G
Sbjct: 1165 VYVWSSTGSLQPPLLLRGSGLSTASGTTEA-----PLLVSAIPDGQDAKSKPVVKHAAAG 1219
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQ 132
TLV +G ++ WG ++GQ
Sbjct: 1220 EEFTLVVTENGLLYSWGSGAFGQ 1242
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ +G G VGQLG +G ++ L+P ++ A+ I ACG HT LT G +Y
Sbjct: 1001 EVMVFGGGEVGQLG-----TGMRKDLLVPTKLQAMPSIV--QAACGYCHTALLTEAGEVY 1053
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRD 119
G +GQLG ++ P + NG ++ +ACG HT+
Sbjct: 1054 TCGSAMSGQLGHADNLQNDRLAPKMVEGL----------NGKRIRFIACGSFHTIAITDL 1103
Query: 120 GKIHGWG 126
++ WG
Sbjct: 1104 DNVYTWG 1110
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
L +Y+WG G G+LGH + P+ V AL G+ IK +ACG H A+T G +
Sbjct: 84 ELQVYSWGWGDFGRLGHGN---SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQ 140
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q GQLGLG T S +P + F ++ V+++A G HT DG
Sbjct: 141 SWGRNQNGQLGLG--TTEDSLLPQKIQA-FESVC-------VKMIAAGAEHTAAVTEDGD 190
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
++GWG+ YG P V GE L A G H+ ++D+ +L
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+++ A + + +K +A G HT A+T G L
Sbjct: 135 MAGEVQSWGRNQNGQLG---LGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDL 191
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + + V + LVACG HT+ G
Sbjct: 192 YGWGWGRYGNLGLG--DRNDRLLPEKVSS--------VEGEKMVLVACGWRHTITVSDSG 241
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 242 NLYTYGWSKYGQ 253
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P +V AL I ++ G HT ALTS+G LY W
Sbjct: 242 NLYTYGWSKYGQLGHGDFED---HLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGW 298
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ+G+G N D + VACG HTL +
Sbjct: 299 GWNKFGQVGVG----------NNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVF 348
Query: 124 GWGYNSYGQAAN 135
WG + GQ N
Sbjct: 349 SWGRGTSGQLGN 360
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKG-ALYAW 63
+WG G GQLGH GD E L+P + D I V CG HT A + +Y+W
Sbjct: 36 SWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSW 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P ++ + ++ +ACG SH L G++
Sbjct: 91 GWGDFGRLGHGNSSDVFTPQPVKALQGLK----------IKQIACGDSHCLAVTMAGEVQ 140
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N GQ + + P + V+ +AAG H+A +T+
Sbjct: 141 SWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---P 100
V+ G H+ AL + L +WG + GQLG G D R +P ++
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHG-------------DAEDRLVPTVLSGFDA 64
Query: 101 NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
+ V CG HT Y D +++ WG+ +G+ + S+ + P PV G +++++A
Sbjct: 65 PAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 159 AGGGHSAVLTDACSLK 174
G H +T A ++
Sbjct: 125 CGDSHCLAVTMAGEVQ 140
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G + + D P +V + I VACG HT AL+ K +++WG
Sbjct: 295 LYGWGWNKFGQVG---VGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWG 351
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+GQLG G + RN P+L+
Sbjct: 352 RGTSGQLGNG-------------EIVDRNTPVLI 372
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGALY 61
D+YTWG G+LGH L + + +P RV L IK VACG HT AL G +Y
Sbjct: 50 DVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-VY 108
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMR 118
+WG + GQLG G DT P+ V + V CGH H+L
Sbjct: 109 SWGSSEYGQLGQG-------------DTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSA 155
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
D +++ WG+ +GQ + A PS V G V +LAAG H+AVLT
Sbjct: 156 DQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLT 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQLG L S + LLP V +L G F+ +A G HT LT++G +Y +G
Sbjct: 159 VYSWGWGVHGQLG---LDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFG 215
Query: 65 GCQAGQLGLGPQTR---------------------SFSFIPNESDTYFRNIPILVVPNGV 103
G GQLGLG ++ SF + S+ N
Sbjct: 216 GGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHYFRF 275
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVGEVRKLAAGGG 162
++ CG+ H L ++ WG+N +GQ + S + +P+ V A+ G
Sbjct: 276 HMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGA 335
Query: 163 HSAVLTDA 170
+V DA
Sbjct: 336 EFSVAMDA 343
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-G 102
++CG HT +++ G +Y WG G+LG G I E + + IL +
Sbjct: 35 LSCGQHHTAVVSASGDVYTWGKSHKGRLGHG------DLIEEEGKSMPFRVEILHMHRIK 88
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V VACG HTL RDG ++ WG + YGQ
Sbjct: 89 VLSVACGIEHTLALCRDG-VYSWGSSEYGQ 117
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLGH + S D L P V L+ F+ + G + A+ + G ++ WG
Sbjct: 294 VFTWGFNDHGQLGHST--SMDHLLFPTVVQKLNESFVATASVGAEFSVAMDATGQVWVWG 351
Query: 65 GCQAGQ 70
+GQ
Sbjct: 352 RSDSGQ 357
>gi|307172226|gb|EFN63743.1| RCC1 domain-containing protein 1 [Camponotus floridanus]
Length = 344
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G+G GQLGH L++ D P+ + AL G+ I ++ GG H+ A+T +G LY W
Sbjct: 179 DVYSMGMGIRGQLGHNELENCDD---PKLIEALAGLKIVQISAGGWHSAAVTDQGDLYTW 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG+ + + +P D F+N + V+ V CG+S T+ DG
Sbjct: 236 GWNSNGELGIESKDKKVYAVPTLVD--FKNDRGETIEINVKKVECGNSFTICLTDDGSFW 293
Query: 124 GWGYNSYGQ----AANEKSTYAWYP---SPVDWCVGEVRKLAAGGGHSAVLTD 169
G G N YGQ N +STY + P+D+ V+K +A++T+
Sbjct: 294 GCGTNKYGQLGKLQQNFESTYKFIELNIQPLDF--KTVKKFKCHEWGTAIITE 344
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 30/173 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG G +GQLGH +L++ EL+PR V AL G+ + VA GG H+ ++ G LY W
Sbjct: 161 QVYTWGTGRLGQLGHGALEA---ELVPRPVEALLGLAMAQVAAGGWHSLCVSEAGDLYIW 217
Query: 64 GGCQAGQLGLGPQT-----------RSFSFIPNESD-------------TYFRNIPILV- 98
G ++GQL L +T S E+ + P L+
Sbjct: 218 GWNESGQLALPSRTIAEREKTVAGASGLSSCSPEAKKPATDGDGDLAQFIAIQPFPALLD 277
Query: 99 VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+P+G +++ +CG HT V RDG+++ WG+ YGQ ++ + P VD+
Sbjct: 278 LPSGSEVIKASCGSRHTAVVTRDGELYTWGWGKYGQLGHKNTASLDQPQRVDY 330
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
+ + G H L G +Y WG + GQLG G E++ R + L+
Sbjct: 144 RQLVLGAEHALLLGGMGQVYTWGTGRLGQLGHGAL---------EAELVPRPVEALLGLA 194
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
Q VA G H+L G ++ WG+N GQ A T A
Sbjct: 195 MAQ-VAAGGWHSLCVSEAGDLYIWGWNESGQLALPSRTIA 233
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALS 197
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + I + N GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPAQSN---KPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G +GQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + P+++ L+GI I V+CG H+ AL+ +++WG
Sbjct: 96 VFAWGAGSEGQLGIGEFK--EISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 154 KNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLCGTS 202
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A + ++ P+ VG ++ L + G H+AVLT
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLS--VGALKNLGVVYISCGDAHTAVLTQ 253
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + P V AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR-DGKI 122
++GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQV 309
Query: 123 HGWGYNSYGQAANEKSTYA 141
+G +G + K T++
Sbjct: 310 VSFG---HGPSDTSKPTHS 325
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G +GQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + P+++ L+GI I V+CG H+ AL+ +++WG
Sbjct: 96 VFAWGAGSEGQLGIGEFK--EISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 154 KNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLCGTS 202
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A + ++ P+ VG ++ L + G H+AVLT
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLS--VGALKNLGVVYISCGDAHTAVLTQ 253
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + P V AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR-DGKI 122
++GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQV 309
Query: 123 HGWGYNSYGQAANEKSTYA 141
+G +G + K T++
Sbjct: 310 VSFG---HGPSDTSKPTHS 325
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G +GQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + P+++ L+GI I V+CG H+ AL+ +++WG
Sbjct: 96 VFAWGAGSEGQLGIGEFK--EISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 154 KNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLCGTS 202
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A + ++ P+ VG ++ L + G H+AVLT
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLS--VGALKNLGVVYISCGDAHTAVLTQ 253
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + P V AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR-DGKI 122
++GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQV 309
Query: 123 HGWGYNSYGQAANEKSTYA 141
+G +G + K T++
Sbjct: 310 VSFG---HGPSDTSKPTHS 325
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+ +G YGQ + +++ P V +G + AA G
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACG 302
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLGH G+ PR V L + I VACGG H+ AL++ G +++WG
Sbjct: 105 VFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G P E T IP Q+VA G SH+ V + G + G
Sbjct: 165 NNSHGQLGIGSTKNQPK--PQEL-TSLTGIPF------CQIVAGG-SHSFVLSKSGAVFG 214
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G N++GQ + YP+ V +V ++ G H+AVLT
Sbjct: 215 FGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLT 259
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLG G K P + ALD I+ V+CG H + K +++WG
Sbjct: 55 VYTCGSNDYGQLGQ---DKGHKR--PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + N S R + L VQ VACG H+L DG+I
Sbjct: 110 YDDCGQLG-----HTLEAGGNNSRRP-RMVKELSSLQIVQ-VACGGKHSLALSNDGRIFS 162
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG NS+GQ + P + G ++ AGG HS VL+ +
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKS 209
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA-LTSKGALYAW 63
+ T+G GS GQLGH S + E LPR+V L G+ + +ACG +HT A + S G +Y++
Sbjct: 264 VLTFGAGSYGQLGH---NSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSF 320
Query: 64 GGCQAGQLG 72
G GQLG
Sbjct: 321 GLGGNGQLG 329
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G + GQLG +GD++ P V +L + + ++CG HT LT G + +G
Sbjct: 212 VFGFGRNTFGQLGLGD--TGDRKY-PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFG 268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGKIH 123
GQLG N + R + L+ QL ACG HT+ Y+ G+I+
Sbjct: 269 AGSYGQLGHN---------SNNHEALPRKVFELMGLEVTQL-ACGRMHTMAYVESSGRIY 318
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G GQ ++ +T P VD
Sbjct: 319 SFGLGGNGQLGSKGTTNCNTPITVD 343
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG ++ D L P+ +++V+CG HT + ++G +Y G
Sbjct: 1 MFCWGAARNGELGLGGIEE-DVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + + I DT +Q V+CG H LV ++
Sbjct: 60 SNDYGQLGQDKGHKRPTVI-TALDT-----------QSIQQVSCGDYHNLVVNDKYQVFS 107
Query: 125 WGYNSYGQAANEKS---TYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
WGY+ GQ + + P V + ++ ++A GG HS L++
Sbjct: 108 WGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSN 156
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 64 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 118
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 119 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 169
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 170 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 215
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 166 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 220
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 221 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 270
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 271 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 321
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 272 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 328
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 329 GLGGNGQLGTG 339
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++ WG GQLGLG P SD + V V+ V CG HT+ +
Sbjct: 9 SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLD 60
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
DG ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 61 DGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 110
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + P +V ALD I V+CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGHDKSRKK-----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+G+ I + RNI L VQ VACGH H+L ++ I+
Sbjct: 110 HAAHGQIGVS--------IAEDYIRVPRNIKSLSDIQIVQ-VACGHHHSLALSKESNIYS 160
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +EK + P + G +AAGGGHS LT
Sbjct: 161 WGQNQYGQLGLGSEKRKES-APRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG S + KE PR + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 NIYSWGQNQYGQLGLGSEKR--KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGL +T R+ P L+ + + CG HT ++G
Sbjct: 215 GRNKFGQLGLNDETD-------------RSDPALLKSLRSQKIIYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + +++ P V +G V ++A G H+
Sbjct: 262 GVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQ+G + D +PR + +L I I VACG H+ AL+ + +Y+WG
Sbjct: 105 VFSWGHAAHGQIGVSIAE--DYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q GQLGLG + R ++ R+I L +G+ +A G H+ G I
Sbjct: 163 QNQYGQLGLGSEKR--------KESAPRHIKSL---SGIPFAHIAAGGGHSFALTISGAI 211
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
GWG N +GQ T P+ + + + + G H+A LT
Sbjct: 212 FGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG+G
Sbjct: 320 GLGGNGQLGIG 330
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L P + +L I + CG HT ALT +G ++ +G
Sbjct: 211 IFGWGRNKFGQLG---LNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + + P + NI V +ACG HTL ++ G+I+
Sbjct: 268 AGGYGQLGHNSASHEVN--PRKVFELMGNI--------VTQIACGRQHTLAFVPSSGRIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV--DWCVGE--VRKLAAGGG 162
+G GQ ++ PS V +W E VR+L G
Sbjct: 318 SFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEANG 360
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P D + + V+ V CG+ HT + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFF--------INKNVRDVGCGNRHTGFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ ++KS
Sbjct: 53 GTVYTCGCNDLGQLGHDKS 71
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + P+ V AL G+ IK +ACG H A+T G + +
Sbjct: 85 LQVYSWGWGDFGRLGHGN---SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQS 141
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG T S +P + F ++ V+++A G HT DG +
Sbjct: 142 WGRNQNGQLGLG--TTEDSLLPQKIQA-FESVC-------VKMIAAGAEHTAAVTEDGDL 191
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
+GWG+ YG P V GE L A G H+ ++D+ +L
Sbjct: 192 YGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+++ A + + +K +A G HT A+T G L
Sbjct: 135 MAGEVQSWGRNQNGQLG---LGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDL 191
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + + V + LVACG HT+ G
Sbjct: 192 YGWGWGRYGNLGLG--DRNDRLLPEKVSS--------VEGEKMVLVACGWRHTITVSDSG 241
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 242 NLYTYGWSKYGQ 253
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + LLP +V +++G + VACG HT ++ G LY +
Sbjct: 190 DLYGWGWGRYGNLG---LGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + + ++ G HT+ +GK++
Sbjct: 247 GWSKYGQLGHG--DFEDHLVPHKVEALKDST--------ISQISGGWRHTMALTSEGKLY 296
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 297 GWGWNKFGQ 305
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
+WG G GQLGH GD E L+P + D I V CG HT A + + +Y+W
Sbjct: 36 SWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSW 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P ++ + ++ +ACG SH L G++
Sbjct: 91 GWGDFGRLGHGNSSDVFTPQPVKALQGLK----------IKQIACGDSHCLAVTMAGEVQ 140
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N GQ + + P + V+ +AAG H+A +T+
Sbjct: 141 SWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P +V AL I ++ G HT ALTS+G LY W
Sbjct: 242 NLYTYGWSKYGQLGHGDFED---HLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGW 298
Query: 64 GGCQAGQLGLG 74
G + GQ+G+G
Sbjct: 299 GWNKFGQVGVG 309
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---P 100
V+ G H+ AL + L +WG + GQLG G D R +P ++
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHG-------------DAEDRLVPTVLSGFDA 64
Query: 101 NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
+ V CG HT Y D +++ WG+ +G+ + S+ + P PV G +++++A
Sbjct: 65 PAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 159 AGGGHSAVLTDACSLK 174
G H +T A ++
Sbjct: 125 CGDSHCLAVTMAGEVQ 140
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YGQ + +++ P V +G V ++A G H++
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + P+ V AL G+ IK +ACG H A+T G + +
Sbjct: 86 LQVYSWGWGDFGRLGHGN---SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQS 142
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG T S +P + F + V+++A G HT DG +
Sbjct: 143 WGRNQNGQLGLG--TTEDSLLPQKIQA-FEGVC-------VKMIAAGAEHTAAVTEDGDL 192
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
+GWG+ YG P V GE L A G H+ ++D+ +L
Sbjct: 193 YGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNL 244
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG GQLG L + + LLP+++ A +G+ +K +A G HT A+T G L
Sbjct: 136 MAGQVQSWGRNQNGQLG---LGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDL 192
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + + V + LVACG HT+ G
Sbjct: 193 YGWGWGRYGNLGLG--DRNDRLLPEKVSS--------VEGEKMVLVACGWRHTITVSDSG 242
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 243 NLYTYGWSKYGQ 254
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + LLP +V +++G + VACG HT ++ G LY +
Sbjct: 191 DLYGWGWGRYGNLG---LGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 247
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + + ++ G HT+ +GK++
Sbjct: 248 GWSKYGQLGHG--DFEDHLVPHKLEALKDST--------ISQISGGWRHTMALTSEGKLY 297
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 298 GWGWNKFGQ 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKG-ALYAW 63
+WG G GQLGH GD E L+P + D I V CG HT A + +Y+W
Sbjct: 37 SWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSW 91
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P ++ + ++ +ACG SH L G++
Sbjct: 92 GWGDFGRLGHGNSSDVFTPQPVKALQGLK----------IKQIACGDSHCLAVTMAGQVQ 141
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N GQ + + P + G V+ +AAG H+A +T+
Sbjct: 142 SWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTE 188
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P ++ AL I ++ G HT ALTS+G LY W
Sbjct: 243 NLYTYGWSKYGQLGHGDFED---HLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGW 299
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ+G+G S + +F + VACG HTL +
Sbjct: 300 GWNKFGQVGVGNNDDHCSPV----QVHFPE------DQKISQVACGWRHTLALSEKKNVF 349
Query: 124 GWGYNSYGQAAN 135
WG + GQ N
Sbjct: 350 SWGRGTSGQLGN 361
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---P 100
V+ G H+ AL + L +WG + GQLG G D R +P ++
Sbjct: 19 VSAGASHSVALLTGNVLCSWGRGEDGQLGHG-------------DAEDRLVPTVLSGFDA 65
Query: 101 NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
G+ V CG HT Y D +++ WG+ +G+ + S+ + P PV G +++++A
Sbjct: 66 PGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 125
Query: 159 AGGGHSAVLTDACSLK 174
G H +T A ++
Sbjct: 126 CGDSHCLAVTMAGQVQ 141
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G + + D P +V + I VACG HT AL+ K +++WG
Sbjct: 296 LYGWGWNKFGQVG---VGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWG 352
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+GQLG G + RN P+L+
Sbjct: 353 RGTSGQLGNG-------------EIVDRNTPVLI 373
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV + L + ++ACG + + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRDG 120
WG GQLGLG ++ P + GV Q VACG++HTLV +G
Sbjct: 205 WGYNGNGQLGLGSSGN-------------QSTPCRLALQGVRVQRVACGYAHTLVLTDEG 251
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 252 QVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 294
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 31/185 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+++ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 42 EVFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ VACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKHVIE-------VACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEF 179
G++ WGYN+ GQ + + A P P R++ + + V+ AC ++C
Sbjct: 147 GEVFAWGYNNSGQVGSGST--ANQPIP--------RRVTSSLQNKVVVNIACG--QMCSM 194
Query: 180 RLAES 184
+ ++
Sbjct: 195 AVVDN 199
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 253 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 307
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P S
Sbjct: 308 MWGQCR-GQSVVLPHLTHLS 326
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ N++++ P + G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCNKQAS----PQLIKSLTGIPFMQVAAGGAHSFVLT 206
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG C+ Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQAS-----PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++WG S GQLG C Q+ P+RV +LDGI + VA GG H+ AL+ GA
Sbjct: 148 QVFSWGSNSHGQLGLGKECPSQAS-----PQRVRSLDGIPLTQVAAGGAHSFALSLSGAS 202
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG AGQL L S +N+ GV ++CG+ HT V + G
Sbjct: 203 FGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNL-------GVIYISCGYEHTAVLTQTG 255
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
K+ +G NSYGQ + + P V+ G V ++ G H+
Sbjct: 256 KVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVSQIDCGSYHT 299
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++ G S GQLG +Q + P+R+ LD + + V+CG H+ A+ KG ++AW
Sbjct: 43 ELHSCGDNSQGQLGRKGVQRDEH---PKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAW 99
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLG+G + + + IP + T G+++ V+CGH H+L G+
Sbjct: 100 GAGSEGQLGVG-EFKEINLIPTKIKTL----------TGIKIIQVSCGHYHSLALSEGGQ 148
Query: 122 IHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 149 VFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALS 197
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P V ALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LATDGQLGL-PGTEECIRVP-------RNIKSLSEIQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P + +L GI +A GG H+ LT GA++ W
Sbjct: 157 EVFSWGQNKYGQLGLGY--EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +++D Y + + V + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++ G H+ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS 312
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + + CG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P +SD +F N ++ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSD-FFLN-------KRIRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EK+
Sbjct: 56 YTCGCNDLGQLGHEKA 71
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG S + P+ V +L GI + V GG T AL+ G ++AWG
Sbjct: 158 VFSWGQNKCGQLGLGS--QIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQLG + +F P D+ R++ GV ++CG HT V +DG ++
Sbjct: 216 RNNAGQLGFKNDAKKGTFKPYAVDS-LRDL-------GVAYISCGEEHTAVLNKDGIVYT 267
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACS 172
+G ++YGQ + P ++ +V ++A G H+ + C+
Sbjct: 268 FGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCN 315
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G GQLG + G+ + ++ +L+ I DV+CG H+ A+ +G +Y+WG
Sbjct: 59 GQNPYGQLG----RKGNNSRI-EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSE 113
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYN 128
GQLG G + S +F P + I L+ +Q ++CG+ H++ DG++ WG N
Sbjct: 114 GQLGTG-KFSSKNFTP-------KRITGLLNRKIIQ-ISCGNFHSVALAEDGRVFSWGQN 164
Query: 129 SYGQ 132
GQ
Sbjct: 165 KCGQ 168
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P V ALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LATDGQLGL-PGTEECIRVP-------RNIKSLSEIQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P + +L GI +A GG H+ LT GA++ W
Sbjct: 157 EVFSWGQNKYGQLGLGY--EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +++D Y + + V + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++ G H+ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS 312
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + + CG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P +SD +F N ++ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSD-FFLN-------KRIRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EK+
Sbjct: 56 YTCGCNDLGQLGHEKA 71
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P V ALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LATDGQLGL-PGTEECIRVP-------RNIKSLSEIQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P + +L GI +A GG H+ LT GA++ W
Sbjct: 157 EVFSWGQNKYGQLGLGY--EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +++D Y + + V + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++ G H+ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS 312
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + + CG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P +SD +F N ++ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSD-FFLN-------KRIRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EK+
Sbjct: 56 YTCGCNDLGQLGHEKA 71
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + P +V ALD I V+CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGHDKSRRK-----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+GL + +P RNI L VQ VACGH H+L +D I
Sbjct: 110 HAVYGQIGLS-TAEEYIRVP-------RNIKSLSDVQIVQ-VACGHHHSLALSKDSDIFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + G +AAGGGHS LT
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DI++WG GQLG L+ KE PR + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 DIFSWGQNQYGQLG-LGLEI-KKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA---CGHSHTLVYMRDG 120
G + GQLGL +T RN+P L+ Q + CG HT ++G
Sbjct: 215 GRNKFGQLGLTDETD-------------RNVPALLKSLRSQKIIHICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + + + P V +G V ++A G H+
Sbjct: 262 GVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S + E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L +P + +L I + CG HT ALT +G ++ +G
Sbjct: 211 IFGWGRNKFGQLG---LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + P + +I V +ACG HTL ++ G+I+
Sbjct: 268 AGGYGQLGHNSTNHEVN--PRKVFELMGSI--------VTQIACGRQHTLAFVPSSGRIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV--DWCVGE--VRKLAAGGG 162
+G GQ + P V +W E VR L G
Sbjct: 318 SFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANG 360
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P D + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFF--------INKNVRDVGCGSRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ ++KS
Sbjct: 53 GTVYTCGCNDLGQLGHDKS 71
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG QS ++ P + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 43 VYSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF+P + I L +Q V+CGH H+L DG +
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFS 150
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 151 WGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++WG
Sbjct: 95 VFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG +RS + IP + + IP+ VA G +H+ G G
Sbjct: 153 RNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSFG 203
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
WG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 148 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ + +CG+ HT V +G++
Sbjct: 206 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVIYI-------SCGYEHTAVLTEEGQVF 257
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+WG G GQLGH + LP+R+ G I +A G HT L S G L+A+G
Sbjct: 1269 IYSWGNGKYGQLGHGVSTPHN---LPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFG 1325
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGL IP +T +I P V + CGHSH+++ G ++
Sbjct: 1326 SNEHGQLGLNDLKHHLP-IPTRVNT--ADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYS 1382
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+G N+ GQ + + YP + G+ ++++ G H+ V TD
Sbjct: 1383 FGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTD 1428
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-------SK 57
+Y WG G LG S EL+P+ V ++ V CG HT LT +
Sbjct: 1432 VYCWGQGEHMCLG---TGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTG 1488
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G +Y G + G+LG+G RS P+ Y IP + N V L A G +
Sbjct: 1489 GNVYICGSSEHGKLGIGGDPRS----PSLDKAYPAIIPSINSANVVDL-ASGAEFNALIT 1543
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+G ++ WG ++GQ N K+ W P+ V
Sbjct: 1544 SNGALYMWGAGTHGQIGNGKNQDTWIPTRV 1573
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
K V+CG H +T G L+ WG +GQLG G P ++ + PI+
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES-LKQTPIM---- 1251
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
+++ G HT+V R I+ WG YGQ + ST P ++ G+ + +A G
Sbjct: 1252 ---MMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATG 1308
Query: 161 GGHSAVL 167
H+ VL
Sbjct: 1309 YWHTLVL 1315
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H D+Y++G + GQLGH S +S P+ + L G IK + CG HT T ++Y
Sbjct: 1377 HGDVYSFGANAKGQLGHGSTESCR---YPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVY 1433
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
WG Q + LG + +P + L V V+ V CG HT
Sbjct: 1434 CWG--QGEHMCLGTGSNKNELVPKLVE--------LFVNKRVERVVCGLYHT 1475
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L ++G+
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKEGEFFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ + WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EFFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + P+ V AL GI IK +ACG H A+T G + +WG
Sbjct: 88 VYSWGWGDFGRLGHGN---STDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWG 144
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P ++ F I V+++A G HT DG I+G
Sbjct: 145 RNQNGQLGLG--TTEDSLLP-QTIQAFEGI-------SVKMIAAGAEHTAAVTEDGDIYG 194
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
WG+ YG + P V G+ L A G H+ ++ + SL
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSL 244
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+ + A +GI +K +A G HT A+T G +
Sbjct: 136 MAGEVLSWGRNQNGQLG---LGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDI 192
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ F+P + + V + + LVACG HT+ G
Sbjct: 193 YGWGWGRYGNLGLG--DRNDRFVPEKVSS--------VEGDKMVLVACGWRHTITVSSSG 242
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 243 SLYTYGWSKYGQ 254
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
TWG G GQLGH GD E L+P + D I V CG HT A + + +Y+W
Sbjct: 37 TWGRGEDGQLGH-----GDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSW 91
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G T F+ P ++ + I I + +ACG SH L G++
Sbjct: 92 GWGDFGRLGHGNSTDVFTPQPVKA---LQGIKI-------KQLACGDSHCLAVTMAGEVL 141
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG N GQ + + P + G V+ +AAG H+A +T+
Sbjct: 142 SWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTE 188
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L+P +V AL ++ G HT ALTS G LY WG
Sbjct: 244 LYTYGWSKYGQLGHGDFED---HLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 300
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G S P + N P V VACG HTL + +
Sbjct: 301 WNKFGQVGAGDNADHCS--PAQV-----NFP---EEQKVAQVACGWRHTLAFTEKKNVFA 350
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 351 WGRGTSGQ 358
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---P 100
V+ G H+ AL + L WG + GQLG G D R +P ++
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHG-------------DAEDRLVPTVISGFDA 65
Query: 101 NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
G+ V CG HT Y D +++ WG+ +G+ + ST + P PV G ++++LA
Sbjct: 66 PGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125
Query: 159 AGGGHSAVLTDA 170
G H +T A
Sbjct: 126 CGDSHCLAVTMA 137
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 28/100 (28%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V + + VACG HT A T K
Sbjct: 296 LYGWGWNKFGQVGAGDNADHCS---------PAQVNFPEEQKVAQVACGWRHTLAFTEKK 346
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
++AWG +GQLG G + RN P+++
Sbjct: 347 NVFAWGRGTSGQLGHG-------------EIVDRNTPVII 373
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P +V ALD I V+CG HT L KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T ++ +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 FAADGQLGL-PGTEEYTRVP-------RNIKSLSDVQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N +GQ ++++ S + G++ AAGG HS LT
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI---AAGGAHSFALT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P+ + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 EVFSWGQNKHGQLGLGY--DLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D Y N+ + + ++CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + + + P V +G V ++A G H++ +
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPS 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIP 84
G GQLG+G + S P
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFP 340
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P + +F N V+ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCN-FFLN-------KTVRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EKS
Sbjct: 56 YTCGCNDLGQLGHEKS 71
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH P +V ALD I V+CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGH-----DKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+GL + +P RNI L VQ VACGH H+L +D I
Sbjct: 110 HAVYGQIGLS-TAEEYIRVP-------RNIKSLSDVQIVQ-VACGHHHSLALSKDSDIFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + P + G +AAGGGHS LT
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DI++WG GQLG L+ KE PR + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 DIFSWGQNQYGQLG-LGLEI-KKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGL +T RN+P L+ + + CG HT ++G
Sbjct: 215 GRNKFGQLGLTDETD-------------RNVPALLKSLRSQKIIHICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + + + P V +G V ++A G H+
Sbjct: 262 GVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S + E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L +P + +L I + CG HT ALT +G ++ +G
Sbjct: 211 IFGWGRNKFGQLG---LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + P + +I V +ACG HTL ++ G+I+
Sbjct: 268 AGGYGQLGHNSTNHEVN--PRKVFELMGSI--------VTQIACGRQHTLAFVPSSGRIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV--DWCVGE--VRKLAAGGG 162
+G GQ + P V +W E VR L G
Sbjct: 318 SFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANG 360
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P D + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFF--------INKNVRDVGCGSRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ ++KS
Sbjct: 53 GTVYTCGCNDLGQLGHDKS 71
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K P +V ALD I V+CG HT L KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P T ++ +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 FAADGQLGL-PGTEEYTRVP-------RNIKSLSDVQIVQ-VACGYYHSLALSKGSEVFS 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N +GQ ++++ S + G++ AAGG HS LT
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI---AAGGAHSFALT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P+ + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 EVFSWGQNKHGQLGLGY--DLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D Y N+ + + ++CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + + + P V +G V ++A G H++ +
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPS 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIP 84
G GQLG+G + S P
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFP 340
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG P + +F N V+ V CG HT+ + DG +
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCN-FFLN-------KTVRDVGCGLRHTVFVLDDGTV 55
Query: 123 HGWGYNSYGQAANEKS 138
+ G N GQ +EKS
Sbjct: 56 YTCGCNDLGQLGHEKS 71
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG GQLG S P++V ALDGI + VA GG H+ AL+ G +Y WG
Sbjct: 166 IFSWGQNIHGQLGLGKDISSQAS--PQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWG 223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
A QLGL S R++ V V+CG HT V ++G ++
Sbjct: 224 RNNAHQLGLSQAKPKEQIFKPYSIAALRSL-------DVAFVSCGAEHTAVLTQNGSVYT 276
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
+G +S GQ N S+ + P V+W G V LA G H+ V
Sbjct: 277 FGDDSAGQLGRNSSSSPKFGPQKVEWIDGPVSLLACGSYHTLV 319
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 9 GLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
G S GQLG L SG ++ P + AL+ + V+CG H+ A+ +KG +Y+WG
Sbjct: 62 GDNSRGQLGR-RLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAG 120
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G IP + I L +Q VACGH H++ DG+I WG
Sbjct: 121 TFGQLGTG--ELGDRLIP-------KTINALSKYKVIQ-VACGHDHSIALTNDGRIFSWG 170
Query: 127 YNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
N +GQ K + P V G + ++AAGG HS L+
Sbjct: 171 QNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQ--SGDKELLP-RRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+Y WG GS GQLG + SG P R A + + VACG HT L G +
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVL--VACGERHTLLLRDDGGVA 59
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPN--ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ G GQLG +P+ E +Y + + V V+CG H+L
Sbjct: 60 SCGDNSRGQLG--------RRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNK 111
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG ++GQ + P ++ +V ++A G HS LT+
Sbjct: 112 GRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTN 162
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + P +V ALD I V+CG HT AL KG +++WG
Sbjct: 39 VYTCGCNDLGQLGHDKSRKK-----PDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWG 93
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+GL + +P RNI L VQ VACGH H+L ++ I+
Sbjct: 94 HAAHGQIGLS-VAEDYIRVP-------RNIKSLYDIQIVQ-VACGHHHSLALSKESDIYS 144
Query: 125 WGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + K A P + G +AAGGGHS LT
Sbjct: 145 WGQNQYGQLGLGSEIKKESA--PRHIKSLAGIPFAHIAAGGGHSFALT 190
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+WG GQLG S KE PR + +L GI +A GG H+ ALT GA++ W
Sbjct: 141 DIYSWGQNQYGQLGLGS--EIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGW 198
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA---CGHSHTLVYMRDG 120
G + GQLGL +T R+ P L+ Q + CG HT ++G
Sbjct: 199 GRNKFGQLGLNDETD-------------RSAPALLKSLRSQKIIHICCGEDHTAALTKEG 245
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + + + P V +G V ++A G H+
Sbjct: 246 GVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 290
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQ+G + D +PR + +L I I VACG H+ AL+ + +Y+WG
Sbjct: 89 VFSWGHAAHGQIGLSVAE--DYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWG 146
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q GQLGLG + + ++ R+I L G+ +A G H+ G I
Sbjct: 147 QNQYGQLGLGSEIK--------KESAPRHIKSLA---GIPFAHIAAGGGHSFALTMSGAI 195
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
GWG N +GQ T P+ + + + + G H+A LT
Sbjct: 196 FGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALT 242
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S + E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 247 VFTFGAGGYGQLGH---NSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSF 303
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 304 GLGGNGQLGTG 314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L P + +L I + CG HT ALT +G ++ +G
Sbjct: 195 IFGWGRNKFGQLG---LNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG 251
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + P + +I V +ACG HTL ++ G+I+
Sbjct: 252 AGGYGQLGHNSTNHEVN--PRKVFELMGSI--------VTQIACGRQHTLAFVPSSGRIY 301
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV--DWCVGE--VRKLAAGGG 162
+G GQ ++ P V +W E V++L G
Sbjct: 302 SFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANG 344
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ-------VSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ-------VSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG QS ++ P + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 43 VYSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF+P + I L +Q V+CGH H+L DG +
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFS 150
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 151 WGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++WG
Sbjct: 95 VFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG +RS + IP + + IP+ VA G +H+ G G
Sbjct: 153 RNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSFG 203
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
WG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 148 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ + +CG+ HT V +G++
Sbjct: 206 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVIYI-------SCGYEHTAVLTEEGQVF 257
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + P +V ALD I V+CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGHDKSRKK-----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+G+ I + RNI L VQ VACGH H+L ++ I+
Sbjct: 110 HAAHGQIGVS--------IAEDYIRVPRNIKSLSDIQIVQ-VACGHHHSLALSKESNIYS 160
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +EK + P + G +AAGGGHS LT
Sbjct: 161 WGQNQYGQLGLGSEKRKES-APRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG S + KE PR + +L GI +A GG H+ ALT GA++ W
Sbjct: 157 NIYSWGQNQYGQLGLGSEKR--KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGL +T R+ P L+ + + CG HT ++G
Sbjct: 215 GRNKFGQLGLNDETD-------------RSDPALLKSLRSQKIIYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + +++ P V +G V ++A G H+
Sbjct: 262 GVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQ+G + D +PR + +L I I VACG H+ AL+ + +Y+WG
Sbjct: 105 VFSWGHAAHGQIGVSIAE--DYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q GQLGLG + R ++ R+I L +G+ +A G H+ G I
Sbjct: 163 QNQYGQLGLGSEKR--------KESAPRHIKSL---SGIPFAHIAAGGGHSFALTISGAI 211
Query: 123 HGWGYNSYGQ 132
GWG N +GQ
Sbjct: 212 FGWGRNKFGQ 221
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLGPQT--RSFSFIPNE---SDTYFRNIP 95
G GQLG+G + +S S + + Y R +P
Sbjct: 320 GLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLP 356
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P D + + V+ V CG+ HT + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFF--------INKNVRDVGCGNRHTGFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ ++KS
Sbjct: 53 GTVYTCGCNDLGQLGHDKS 71
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 21/174 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G LGH + D+ LP++V L I D CG +T AL G +Y+W
Sbjct: 274 EVYTWGFGKNGALGHGNW---DQVDLPKKVEGLSNIVKID--CGMDYTFALDKDGNIYSW 328
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNG---VQLVACGHSHTLVYMRD 119
G + GQLG +S+ N+PI L +P+G V ++CG H+
Sbjct: 329 GSNRYGQLG-----------TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDK 377
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
G+ WGY + GQ +++ T P +++ +R++ GGGH+ V+T A L
Sbjct: 378 GEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTE-PLRRVVCGGGHTGVITTAGKL 430
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 76/184 (41%), Gaps = 33/184 (17%)
Query: 5 IYTWGLGSVGQLGH---CSLQSGDKELLPRRVV----------ALDGIFIKDVACGGVHT 51
+ TWG G+LGH +S +K PR AL+ I +CG HT
Sbjct: 207 LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHT 266
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACG 109
LT G +Y WG + G LG G + ++P V + N V+ + CG
Sbjct: 267 ACLTQDGEVYTWGFGKNGALGHGNWDQV-------------DLPKKVEGLSNIVK-IDCG 312
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV----GEVRKLAAGGGHSA 165
+T +DG I+ WG N YGQ +S + P+ + V ++ G HSA
Sbjct: 313 MDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSA 372
Query: 166 VLTD 169
L D
Sbjct: 373 FLND 376
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 4 DIYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
IYTWG G L SL LLP +VA + F++ VACG H +T G L
Sbjct: 151 QIYTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQ-VACGKTHLAGVTKDGKLIT 209
Query: 63 WGGCQAGQLG----LGPQTRSFSFIPNESDTY--FRNIPILVVPNGVQLVACGHSHTLVY 116
WG G+LG L ++++ S+ P Y + + + +CG HT
Sbjct: 210 WGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACL 269
Query: 117 MRDGKIHGWGYNSYG 131
+DG+++ WG+ G
Sbjct: 270 TQDGEVYTWGFGKNG 284
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL---LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ +WG G GQLG+ G++ L +P V L I V G + A+TS+G +Y
Sbjct: 99 LLSWGNGQNGQLGN-----GNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIY 153
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
WG + G L Q +S S N +P L+V VQ VACG +H +D
Sbjct: 154 TWGKTRGGSL---SQQKSLSRATNLL------LPTLIVAPEVQFVQVACGKTHLAGVTKD 204
Query: 120 GKIHGWGYNSYGQ 132
GK+ WG G+
Sbjct: 205 GKLITWGNPDQGK 217
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGALY 61
+IY+WG GQLG + QS +K +P ++ G + D++CG H+ L KG +
Sbjct: 324 NIYSWGSNRYGQLG--TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAF 381
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG ++ T L ++ V CG HT V GK
Sbjct: 382 IWGYGNDGQLG------------HKEKTNLNQPKKLEFTEPLRRVVCGGGHTGVITTAGK 429
Query: 122 IHGWGYNSYGQ 132
+ +G GQ
Sbjct: 430 LFLFGRGRDGQ 440
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ + WG G+ GQLGH + ++ P+++ + + + V CGG HT +T+ G L+ +
Sbjct: 379 EAFIWGYGNDGQLGHKEKTNLNQ---PKKLEFTEPL--RRVVCGGGHTGVITTAGKLFLF 433
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
G + GQLG G NES FR P VV
Sbjct: 434 GRGRDGQLGRGD--------VNESMAAFRIEPKEVV 461
>gi|296087557|emb|CBI34146.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G G G LGH +ELLPR V I+ +A G HT A+T G LY WG Q
Sbjct: 60 GYGGFGALGHSVYH---RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQG 116
Query: 69 -GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
G+LGLGP PNE + +P V V+CG T+V ++G++ WG
Sbjct: 117 DGRLGLGPNCG-----PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGA 171
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
NS + W P P+ + +VR ++A+GG HS LTD
Sbjct: 172 NSNYELGRGDKVGGWKPQPIP-SLQDVRIIQIASGGYHSLALTD 214
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 4 DIYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG G +G +C G +P +V AL + + V+CGG T LT +G
Sbjct: 107 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTQEGQ 165
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
L+ WG +LG G + + P S R I I A G H+L D
Sbjct: 166 LWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQI----------ASGGYHSLALTDD 215
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
GK+ WGY +GQ + P+ ++ E V +A GG SA +TD
Sbjct: 216 GKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITD 266
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +WG G GQLGH S+++ + +P + AL + +ACGG + A+T G LY W
Sbjct: 217 KVLSWGYGQHGQLGHSSIEN---QKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMW 273
Query: 64 GGCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G + QLG+ P+T+ P + F + P+ V VA G SH +
Sbjct: 274 GNAKDSQLGVPGLPETQ-----PLPVEVKFLMEDDRLGPHNVLSVAVGASHAM 321
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S +LG G K P+ + +L + I +A GG H+ ALT G + +W
Sbjct: 165 QLWNWGANSNYELGRGDKVGGWK---PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSW 221
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G Q GQLG S I N+ IP ++ V +ACG S + +G
Sbjct: 222 GYGQHGQLG-------HSSIENQ------KIPTVIEALADEHVIYIACGGSSSAAITDNG 268
Query: 121 KIHGWG 126
K++ WG
Sbjct: 269 KLYMWG 274
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + VG ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGLDCKKQT---SPQLIKSLVGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQTS-----PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ-------VSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + P+ V AL GI IK +ACG H A+T G + +WG
Sbjct: 88 VYSWGWGDFGRLGHGN---STDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWG 144
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P ++ F I V+++A G HT DG I+G
Sbjct: 145 RNQNGQLGLG--TTEDSLLP-QTIQAFEGIS-------VKMIAAGAEHTAAVTEDGDIYG 194
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
WG+ YG + P V G+ L A G H+ ++ + SL
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSL 244
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+ + A +GI +K +A G HT A+T G +
Sbjct: 136 MAGEVLSWGRNQNGQLG---LGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDI 192
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ F+P + + V + + LVACG HT+ G
Sbjct: 193 YGWGWGRYGNLGLG--DRNDRFVPEKVSS--------VEGDKMVLVACGWRHTITVSSSG 242
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 243 SLYTYGWSKYGQ 254
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
TWG G GQLGH GD E L+P + D I V CG HT A + + +Y+W
Sbjct: 37 TWGRGEDGQLGH-----GDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSW 91
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G T F+ P ++ + I I + +ACG SH L G++
Sbjct: 92 GWGDFGRLGHGNSTDVFTPQPVKA---LQGIKI-------KQLACGDSHCLAVTMAGEVL 141
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG N GQ + + P + G V+ +AAG H+A +T+
Sbjct: 142 SWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTE 188
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L+P +V AL ++ G HT ALTS G LY WG
Sbjct: 244 LYTYGWSKYGQLGHGDFE---DHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 300
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ GQ+G G S P + N P V VACG HTL +
Sbjct: 301 WNKFGQVGAGDNADHCS--PAQV-----NFP---EEQKVAQVACGWRHTLAF 342
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---P 100
V+ G H+ AL + L WG + GQLG G D R +P ++
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHG-------------DAEDRLVPTVISGFDA 65
Query: 101 NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
G+ V CG HT Y D +++ WG+ +G+ + ST + P PV G ++++LA
Sbjct: 66 PGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125
Query: 159 AGGGHSAVLTDA 170
G H +T A
Sbjct: 126 CGDSHCLAVTMA 137
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + S D L P+ + AL G+ I+ +ACG H A+T +G + +W
Sbjct: 81 EVYSWGWGDFGRLGHGN--SSDL-LTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSW 137
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG T S +P + F I I ++VA G HT DG++
Sbjct: 138 GRNQNGQLGLG--TTEDSLVPQKIQA-FEGISI-------KMVAAGAEHTAAVTEDGELF 187
Query: 124 GWGYNSYG 131
GWG+ YG
Sbjct: 188 GWGWGRYG 195
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 130 MEGEVQSWGRNQNGQLG---LGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGEL 186
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + G LGLG R+ +P + + V + + +VACG HT+ G
Sbjct: 187 FGWGWGRYGNLGLG--DRNDRLVPQKVSS--------VDGDKMVMVACGWRHTISVSSLG 236
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ +G++ YGQ + P ++ G+ + +++ G H+ LT
Sbjct: 237 GLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALT 285
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E L P ++ ALDG I V CG HT A + ++ +Y
Sbjct: 29 VCSWGRGEDGQLGH-----GDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVY 83
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G + + P ++ + ++ +ACG SH L +G+
Sbjct: 84 SWGWGDFGRLGHGNSSDLLTPKPIKALHGLK----------IRQIACGDSHCLAVTMEGE 133
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 134 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGEL 186
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L+P R+ AL G I ++ G HT ALT+ G LY WG
Sbjct: 238 LYTYGWSKYGQLGHGDFED---RLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWG 294
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G S I + + I I +CG HTL +
Sbjct: 295 WNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQI----------SCGWRHTLAVTDKQNVFS 344
Query: 125 WGYNSYGQAANEKSTYAWYPS-----PVDWCVGE 153
WG + GQ + +S P VD C G+
Sbjct: 345 WGRGTNGQLGHGESVDRNTPMILEALSVDGCSGQ 378
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H+ AL S + +WG + GQLG G S P + L +G
Sbjct: 13 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS--PTQ----------LSALDGH 60
Query: 104 QLVA--CGHSHTLVY-MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 159
++V+ CG HT Y + +++ WG+ +G+ + S+ P P+ G ++R++A
Sbjct: 61 EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIAC 120
Query: 160 GGGHSAVLT 168
G H +T
Sbjct: 121 GDSHCLAVT 129
>gi|361066845|gb|AEW07734.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
Length = 65
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 13 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+GQLGH SLQ +KELLPRRVV L+GI +KD+ACGG+HTCA+T KG+LYAW
Sbjct: 1 MGQLGHRSLQYDNKELLPRRVVGLEGIKVKDIACGGIHTCAVTIKGSLYAW 51
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YGQ + +++ P V +G V ++A G H++
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D +P+ + AL G+ +K +ACG H A+T+ G + WG
Sbjct: 88 VYSWGWGDFGRLGHGN--SSDL-FIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWG 144
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG + + T F + V+++A G HT +GK++G
Sbjct: 145 RNQNGQLGLG---HTEDVLTPHKLTAFEGV-------AVKMLAAGAEHTTAVTENGKLYG 194
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
WG+ YG P V GE+ K+ A G
Sbjct: 195 WGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACG 231
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E P V ALD I V CG HT AL+ S +Y
Sbjct: 35 VCSWGRGEDGQLGH-----GDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVY 89
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDG 120
+WG G+LG G S FIP PI + V+ +ACG SH L DG
Sbjct: 90 SWGWGDFGRLGHG--NSSDLFIPQ---------PIKALKGLEVKQIACGDSHCLAITTDG 138
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ GWG N GQ + P + G V+ LAAG H+ +T+ L
Sbjct: 139 EVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKL 192
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG L + L P ++ A +G+ +K +A G HT A+T G LY W
Sbjct: 139 EVLGWGRNQNGQLG---LGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G LGLG R +P++ V +++VACG HT+ G ++
Sbjct: 196 GWGRYGNLGLGD--REDRLVPDQV--------AAVAGELMKMVACGWRHTICVAESGNMY 245
Query: 124 GWGYNSYGQ 132
+G++ YGQ
Sbjct: 246 TFGWSKYGQ 254
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WG G G LG GD+E L+P +V A+ G +K VACG HT + G +Y
Sbjct: 192 LYGWGWGRYGNLG-----LGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYT 246
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+G + GQLG G + IP++ + +Q + G HT DG++
Sbjct: 247 FGWSKYGQLGHGD--FADHLIPHQVQA--------LKSKKIQAITGGWRHTFALDSDGRL 296
Query: 123 HGWGYNSYGQ 132
+GWG+N +GQ
Sbjct: 297 YGWGWNKFGQ 306
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH L+P +V AL I+ + G HT AL S G LY W
Sbjct: 243 NMYTFGWSKYGQLGHGDFAD---HLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGW 299
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ+G G N D + + V +V CG HTL G ++
Sbjct: 300 GWNKFGQVGCG----------NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVY 349
Query: 124 GWGYNSYGQ 132
WG + GQ
Sbjct: 350 SWGRGTSGQ 358
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
R+V+AL + G H+ AL S + +WG + GQLG G D
Sbjct: 14 RQVLAL--------SAGASHSVALLSGDLVCSWGRGEDGQLGHG-------------DAE 52
Query: 91 FRNIPILVVPNG---VQLVACGHSHTLVYMRDGK-IHGWGYNSYGQAANEKSTYAWYPSP 146
R+ P +V + V CG HT K ++ WG+ +G+ + S+ + P P
Sbjct: 53 ERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQP 112
Query: 147 VDWCVG-EVRKLAAGGGHSAVLT 168
+ G EV+++A G H +T
Sbjct: 113 IKALKGLEVKQIACGDSHCLAIT 135
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G C + + + P+ V L + V CG HT A+T +G +Y+WG
Sbjct: 296 LYGWGWNKFGQVG-CG--NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWG 352
Query: 65 GCQAGQLGLG 74
+GQLG G
Sbjct: 353 RGTSGQLGHG 362
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G S GQLG G++ P R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 48 GDNSRGQLGRKGTPRGEQ---PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASE 104
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYN 128
GQLG+G + + +FIP + T I I+ VACGH H++ DG++ WG N
Sbjct: 105 GQLGIG-EFKETTFIPKKIKT-LAGIKIIQ-------VACGHYHSVALSEDGQVFSWGTN 155
Query: 129 SYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
S+GQ K + P V G + ++AAGG HS L+
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L N ++ + I + GV ++CG+ HT V +DGK+
Sbjct: 207 SNNAGQLALSGN--------NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHT 299
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQL + + P + AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NSYGQLGHDP-------------TAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 123 HGWG 126
+G
Sbjct: 310 VSFG 313
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG GD LP V AL + V+CG H+ A+ KG ++AWG
Sbjct: 44 VHSCGENSRGQLGRRGAPRGD---LPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + +F P + T G+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEINFTPKKITTL----------TGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ E S+ A P V G V ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKELSSQA-SPQRVRSLEGIPVAQVAAGGAHSFALS 197
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG S P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLGKELSSQAS--PQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQL L + S +N+ GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYISCGDEHTAVLSQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ GG H+
Sbjct: 259 TFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHT 299
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRRAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L + +P +S+ + + I + N GV ++CG HT V ++DGK+
Sbjct: 207 SNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + + +PRRV + L + ++ACG + + A+ G +Y
Sbjct: 153 EVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYV 209
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 210 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQI 259
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 260 YAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSA 300
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 206 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAW 262
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G++
Sbjct: 263 GANSYGQLGTG----------NKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQV 312
Query: 123 HGWG 126
+ WG
Sbjct: 313 YMWG 316
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+++ G+ G LG +QS + PRR LD + K +AC G H T +G
Sbjct: 47 EVFVLGMNCSGCLGTGDMQS---TIEPRR---LDSLCGKKIACLSYGSGPHVVLATEEGE 100
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG QLG G T + F+P + T N ++ V ACG H++V D
Sbjct: 101 VYTWGHNAYSQLGNG--TTNHGFVPCQVSTNLVNKKVIEV-------ACGSHHSMVLTSD 151
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 152 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCL 183
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL 60
IY WG S GQLG +G+K + P VV I+ AC HT A T G +
Sbjct: 258 QIYAWGANSYGQLG-----TGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQV 312
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P F+
Sbjct: 313 YMWGQCR-GQSVILPHLTHFA 332
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRRAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L + +P +S+ + + I + N GV ++CG HT V ++DGK+
Sbjct: 207 SNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRRAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L + +P +S+ + + I + N GV ++CG HT V ++DGK+
Sbjct: 207 SNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + + +PRRV + L + ++ACG + + A+ G +Y
Sbjct: 148 EVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQI 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSA 295
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G++
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+++ G+ G LG +QS + PRR LD + K +AC G H T +G
Sbjct: 42 EVFVLGMNCSGCLGTGDMQS---TIEPRR---LDSLCGKKIACLSYGSGPHVVLATEEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG QLG G T + F+P + T N ++ V ACG H++V D
Sbjct: 96 VYTWGHNAYSQLGNG--TTNHGFVPCQVSTNLVNKKVIEV-------ACGSHHSMVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCL 178
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL 60
IY WG S GQLG +G+K + P VV I+ AC HT A T G +
Sbjct: 253 QIYAWGANSYGQLG-----TGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQV 307
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ P F+
Sbjct: 308 YMWGQCR-GQSVTFPHLTHFA 327
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRRAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L + +P +S+ + + I + N GV ++CG HT V ++DGK+
Sbjct: 207 SNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y++G GS G LGH GD+ L P + +L+ + +ACGG H+ A+T G LY
Sbjct: 108 LYSFGQGSEGALGH-----GDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYI 162
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGL T S+ +L + V VACG+ HT V DGK+
Sbjct: 163 WGSNSEGQLGLKNDTISYP-------------TMLDLGKSVISVACGYYHTAVVTADGKL 209
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+ +G G+ + ++ P V G+V K+A GG H+ LT
Sbjct: 210 YTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALT 257
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 27/176 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG +++ K P+ V + G +K VACGG HT ALT+ G +Y +G
Sbjct: 209 LYTFGETEGGKLGLGDIEA-HKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFG 266
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
Q GQLGLG + NIP LV ++ +ACG SHT V G+
Sbjct: 267 SGQNGQLGLGSKIMD------------SNIPKLVEALSKRKIKHIACGESHTAVVSDKGE 314
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLTDACS 172
+ +G +G+ +++ PV V +++ +A GG H+ V AC+
Sbjct: 315 LFTFGDGRHGKLGQGDESFSNLFKPVK--VQRLKEFIVLHIACGGCHTIV---ACN 365
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 23/168 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G GQLG S ++ +K P V AL I VA G HT A+T LY++G
Sbjct: 56 LFTFGNNEWGQLGIGSNKTRNK---PTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
G LG G +E+D N+P + V ++ACG H+ ++G+
Sbjct: 113 QGSEGALGHG----------DETDL---NMPTSIESLEDKDVNIIACGGYHSAAITKNGE 159
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG NS GQ + T + YP+ +D +G+ V +A G H+AV+T
Sbjct: 160 LYIWGSNSEGQLGLKNDTIS-YPTMLD--LGKSVISVACGYYHTAVVT 204
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ D+ACG HT +T G L+ +G + GQLG+G RN P V
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKT-------------RNKPTTVKA 83
Query: 99 -VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 156
P + VA G HTL K++ +G S G + T P+ ++ +V
Sbjct: 84 LKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI 143
Query: 157 LAAGGGHSAVLT 168
+A GG HSA +T
Sbjct: 144 IACGGYHSAAIT 155
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG S+ ++ PR V AL I +ACG H+ ALT+ G LY+WG
Sbjct: 105 LFSWGCNMKGQLGLNSVDCTERT--PRMVKALGTSVIVQIACGIEHSIALTNDGELYSWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG+G T + P R I + VP + +ACG HT+V + G +
Sbjct: 163 SNREGQLGIGSHTVT-EIKPK------RIITLAAVP--IAFIACGGYHTVVISKSGVVFA 213
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 214 WGRNTFGQ 221
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S E+ P+R++ L + I +ACGG HT ++ G ++AW
Sbjct: 157 ELYSWGSNREGQLGIGS--HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDG 120
G GQLGL +DT R +P + + N V ACG ++ DG
Sbjct: 215 GRNTFGQLGL-------------NDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ G YGQ + P V +G V +++ G H+ L +
Sbjct: 262 GVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPS 312
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLGH + K L + + LD K +ACG HT A+ G L++WG
Sbjct: 55 VYSCGNNDYGQLGH---EKARKRL--QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGK 121
GQLGL N D R P +V G + +ACG H++ DG+
Sbjct: 110 CNMKGQLGL-----------NSVDCTERT-PRMVKALGTSVIVQIACGIEHSIALTNDGE 157
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ WG N GQ + T + + +A GG H+ V++ +
Sbjct: 158 LYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG ++ + +PR+V ++ +ACG +T +T+ G +Y+ G
Sbjct: 1 MFCWGSTIHGELGLGGIED-ENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + IP F+ I ACG HTL G++
Sbjct: 60 NNDYGQLGHEKARKRLQLIPGLDAFVFKKI------------ACGSCHTLAVNEWGQLFS 107
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAES 184
WG N GQ + VD C ++ G S ++ AC ++ S
Sbjct: 108 WGCNMKGQLG---------LNSVD-CTERTPRMVKALGTSVIVQIACGIE--------HS 149
Query: 185 VTLSNASEI 193
+ L+N E+
Sbjct: 150 IALTNDGEL 158
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +Y+WG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + + +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGL-LGSEEYIRVP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +Y+WG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + + +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGL-LGSEEYIRVP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + VG ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLVGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
multifiliis]
Length = 879
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY++G+G G LGH L D +P+ ++ + I + CG HT ALT LY+WG
Sbjct: 117 IYSYGIGEYGSLGHGGLIYSD---IPKNIIKFNQKKIIQITCGEFHTLALTDTYDLYSWG 173
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGK 121
GQLG G SF P +++ + V+ +ACG H+L DG
Sbjct: 174 RGFEGQLGTGKDCASF---PCYVSIFYQKYDYENKKDQKKIVKYIACGAYHSLAISDDGI 230
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDW---------CVGEVRKLAAGGGHSAVLTDACS 172
++ WG GQ N KS YP V++ ++ ++ G GHSA + ++
Sbjct: 231 LYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENILEDKIICVSGGYGHSAAVLESGE 290
Query: 173 L 173
L
Sbjct: 291 L 291
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-----------IKDVACGGVHTC 52
D+Y+WG G GQLG D P V + +K +ACG H+
Sbjct: 168 DLYSWGRGFEGQLG----TGKDCASFPCYVSIFYQKYDYENKKDQKKIVKYIACGAYHSL 223
Query: 53 ALTSKGALYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS 111
A++ G LYAWG + GQ G G ++ + I N + ++ + + V+ G+
Sbjct: 224 AISDDGILYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEEN---ILEDKIICVSGGYG 280
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
H+ + G+++ WG N GQ + +++P V
Sbjct: 281 HSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQKV 316
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALDGIFIKDVAC--GGV-HTCALTS 56
+Y WG +GQ G+ +S E P+ V + + I + C GG H+ A+
Sbjct: 231 LYAWGEARLGQTGNGKSKS---EKYPKIVNFGNNLKEENILEDKIICVSGGYGHSAAVLE 287
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNE--SDTYFRNIPILVVPNGVQLVACGHSHTL 114
G LY WG GQLG G + S+ P + D NIP+ + V CG+++T
Sbjct: 288 SGELYTWGLNFNGQLGHG--SIKSSYFPQKVVKDILGNNIPLF------KTVQCGYNNTF 339
Query: 115 VYMRDGKIHGWGYNSYGQAAN 135
+G++ WG + G N
Sbjct: 340 AIDINGQLWSWGGGNLGHKNN 360
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 21/116 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV----ALDGIFIKDVACGGVHTCALTSKGA 59
++YTWGL GQLGH S++S P++VV + K V CG +T A+ G
Sbjct: 290 ELYTWGLNFNGQLGHGSIKS---SYFPQKVVKDILGNNIPLFKTVQCGYNNTFAIDINGQ 346
Query: 60 LYAWGGCQAG-----------QLGLGPQTRSFSFIPNESDT--YFRNIPILVV-PN 101
L++WGG G ++ Q R FS I S++ +F + I+ V PN
Sbjct: 347 LWSWGGGNLGHKNNHFQDLPRKITQNTQNRKFSEIHATSNSAVFFAPMRIMSVRPN 402
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 23/164 (14%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
IK + CG HT +T +G +Y++G + G LG G +S IP +NI
Sbjct: 98 IKKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLI--YSDIP-------KNIIKFNQK 148
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE------- 153
+Q + CG HTL ++ WG GQ K A +P V +
Sbjct: 149 KIIQ-ITCGEFHTLALTDTYDLYSWGRGFEGQLGTGKDC-ASFPCYVSIFYQKYDYENKK 206
Query: 154 -----VRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASE 192
V+ +A G HS ++D L E RL ++ + SE
Sbjct: 207 DQKKIVKYIACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSE 250
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + P+ V AL GI IK +ACG H A+T G + +WG
Sbjct: 98 VYSWGWGDFGRLGHGN---SSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWG 154
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P + + F + V+++A G HT DG ++G
Sbjct: 155 RNQNGQLGLG--TTEDSLLPQKIQS-FEGV-------CVKMIAAGAEHTAAVTEDGDLYG 204
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
WG+ YG P V GE L A G H+ ++ + SL
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSL 254
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+++ + +G+ +K +A G HT A+T G L
Sbjct: 146 MAGEVQSWGRNQNGQLG---LGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + + V + L+ACG HT+ G
Sbjct: 203 YGWGWGRYGNLGLG--DRNDRLVPEKVSS--------VEGEKMVLIACGWRHTITVSSSG 252
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 253 SLYTYGWSKYGQ 264
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L+P ++ AL I ++ G HT ALTS G LY WG
Sbjct: 254 LYTYGWSKYGQLGHGDFED---HLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWG 310
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VP--NGVQLVACGHSHTLVYMRDGK 121
+ GQ+G+G DT P+ V P V VACG HTL +
Sbjct: 311 WNKFGQVGVG-------------DTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKN 357
Query: 122 IHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 358 VFSWGRGTSGQ 368
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF--IKDVACGGVHTCALTS-KGALY 61
+WG G GQLGH GD E L+P + D I V CG HT A + + +Y
Sbjct: 45 SWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVY 99
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G + F+ P ++ + I I + +ACG SH L G+
Sbjct: 100 SWGWGDFGRLGHGNSSDVFTPQPVKA---LQGIKI-------KQIACGDSHCLAVTMAGE 149
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG N GQ + + P + G V+ +AAG H+A +T+ L
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----- 98
V+ G H+ AL + L +WG + GQLG G D R +P ++
Sbjct: 27 VSAGASHSVALLAGNVLCSWGRGEDGQLGHG-------------DAEDRLVPTVLSGFDA 73
Query: 99 VPNGVQLVACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 156
G+ V CG HT Y D +++ WG+ +G+ + S+ + P PV G ++++
Sbjct: 74 AAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQ 133
Query: 157 LAAGGGHSAVLTDACSLK 174
+A G H +T A ++
Sbjct: 134 IACGDSHCLAVTMAGEVQ 151
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G + D P +V + + VACG HT A T K +++WG
Sbjct: 306 LYGWGWNKFGQVG---VGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+GQLG G + RN P+++
Sbjct: 363 RGTSGQLGHG-------------EIVDRNKPVMI 383
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + +L+PRRV L + ++ACG + + A+ + G +Y
Sbjct: 101 EVFAWGYNNSGQVGSGSTAN---QLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYV 157
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 158 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQV 207
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 208 YAWGANSYGQLGTGNKSNQSYPAPV--VVEKDRIIEIAACHSA 248
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 154 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 210
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 211 GANSYGQLGTG----------NKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 260
Query: 123 HGWG 126
+ WG
Sbjct: 261 YMWG 264
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 30 PRRVVALDGIFIKDVAC----GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
PRR+ +L+G K +AC G H T++G ++ WG QLG G T + +P
Sbjct: 18 PRRLESLNG---KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNG--TTNHGLVPC 72
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
T N V VACG H+LV DG++ WGYN+ GQ + + P
Sbjct: 73 HISTNLSN-------KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPR 125
Query: 146 PVDWCV 151
V C+
Sbjct: 126 RVTGCL 131
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 206 QVYAWGANSYGQLG-----TGNKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 260
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 261 YMWGQCRGQSVTL-PHLTHFS 280
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G S GQLG G++ P R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 48 GDNSRGQLGRKGTPRGEQ---PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASE 104
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWG 126
GQLG+G + + +FIP + T G+++ VACGH H++ DG++ WG
Sbjct: 105 GQLGIG-EFKETTFIPKKIKTL----------AGIKIIQVACGHYHSVALSEDGQVFSWG 153
Query: 127 YNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 154 TNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L N ++ + I + GV ++CG+ HT V +DGK+
Sbjct: 207 SNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHT 299
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + + P + AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NSYGQLGHDP-------------TAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 123 HGWG 126
+G
Sbjct: 310 VSFG 313
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + VG ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLVGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +LDGI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGSNSDGQLGLG--KKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQL L S S + +N+ GV ++CG+ HT+V ++GK+
Sbjct: 206 GRNNAGQLALHKNNVSGQSYKPYSISALKNL-------GVIYISCGYEHTVVLTQNGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N+YGQ + + P V+ G V ++ G H+
Sbjct: 259 TFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHT 299
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 9 GLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
G G +GQ G CS Q +R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 51 GRGQLGQRGAPCSAQL-------KRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGS 103
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG G + + + IP + T +I I + V+CGH H+L G++ WG
Sbjct: 104 EGQLGTG-EFKETNLIPMKIKT-LNDIKI-------KQVSCGHYHSLALSEGGQVFSWGS 154
Query: 128 NSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
NS GQ +K P V G + ++AAGG HS L+
Sbjct: 155 NSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALS 197
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G S GQLG G++ P R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 48 GDNSRGQLGRKGTPRGEQ---PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASE 104
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWG 126
GQLG+G + + +FIP + T G+++ VACGH H++ DG++ WG
Sbjct: 105 GQLGIG-EFKETTFIPKKIKTL----------AGIKIIQVACGHYHSVALSEDGQVFSWG 153
Query: 127 YNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 154 TNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 149 VFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L N ++ + I + GV ++CG+ HT V +DGK+
Sbjct: 207 SNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 259 TFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHT 299
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + + P + AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NSYGQLGHDP-------------TAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 123 HGWG 126
+G
Sbjct: 310 VSFG 313
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 87 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 144 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 193
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 194 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 232
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 137 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 194 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 240
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 YSGALYTYGWSKYGQ 255
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 38 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 245 LYTYGWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 302 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 14 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 52
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 53 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 112
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 113 PIKALHGIRIKQIACGDSHCLAVT 136
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ V+CG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VSCGYYHSLALSKASEVFS 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G++ P R+ AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VQSCGDNSRGQLGRKGTPRGEQ---PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + +FIP + T I I+ VACGH H++ DG++
Sbjct: 101 AASEGQLGIG-EFKETTFIPKKIKT-LAGIKII-------QVACGHYHSVALSEDGQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L N ++ + I + GV ++CG+ HT V +DGK+
Sbjct: 206 GSNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NSYGQ ++ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHT 299
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + + P + AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
GQLG P T + P LV + V + CG HTL Y+ G++
Sbjct: 263 NSYGQLGHDP-------------TAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 123 HGWG 126
+G
Sbjct: 310 VSFG 313
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG GQLG L S D E +PR + L I +ACG H+ ALT+ G LYA
Sbjct: 104 QLFSWGCNMNGQLG---LNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYA 160
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGLG T + P T + VP + +ACG HT+V + G +
Sbjct: 161 WGSNREGQLGLGSYTTT-EIKPKRIST------LAAVP--IAFIACGGYHTIVISKSGAV 211
Query: 123 HGWGYNSYGQ 132
WG N++GQ
Sbjct: 212 FSWGRNTFGQ 221
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG S + E+ P+R+ L + I +ACGG HT ++ GA+++W
Sbjct: 157 ELYAWGSNREGQLGLGSYTT--TEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDG 120
G GQLGL +D RN+P + + N V CG ++ DG
Sbjct: 215 GRNTFGQLGL-------------NDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ G YGQ + +T P V +G V +++ G H+ L +
Sbjct: 262 GVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPS 312
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG ++ + +PR V ++ ++ +ACG +T A+T +G +Y+ G
Sbjct: 1 MFCWGSTIHGELGLGGIED-ENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + IP FR I ACG+ HTL G++
Sbjct: 60 NNDYGQLGHEKARKRLQLIPGLDAFVFRKI------------ACGNCHTLAVNEWGQLFS 107
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG N GQ N P + + ++A G HS LT+
Sbjct: 108 WGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN 154
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH + E+LPR+V+ L G + ++CG HT AL S+G +YAW
Sbjct: 263 VFTCGAGMYGQLGH---GNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 319
Query: 64 GGCQAGQLG 72
G AGQLG
Sbjct: 320 GLGGAGQLG 328
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + VG ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLVGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG +VGQLGH + ++ PR + A+ + +A G H ALT+ G LYAWG
Sbjct: 110 VFSWGSNAVGQLGHDA--ENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLG+G + +P +P L+ VP + +ACG +H+ +
Sbjct: 168 SNSYGQLGIGTTSEK---VP---------MPTLIQSLAGVP--IAFIACGGNHSFAVSKS 213
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G I GWG N++GQ YP+ + VR ++ G S LT+
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTN 264
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG + + +K +P + +L G+ I +ACGG H+ A++ GA++ W
Sbjct: 162 ELYAWGSNSYGQLGIGT--TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R + T R + L GV+ ++CG ++ +G +
Sbjct: 220 GKNTFGQLGLNDLNSRCYP-------TQLRTLRSL----GVRYISCGDDFSVFLTNEGGV 268
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + + P V +G ++ ++A G H+
Sbjct: 269 FTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 311
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G GQLGH +K P+R+ +L+ I ++CG H+ ALT+ G +++WG
Sbjct: 57 MYACGNNDHGQLGHDLDTLPNKR--PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + N R I + + VQ +A G H L +G+++
Sbjct: 115 SNAVGQLGHDAE--------NGRQPTPRMIKAIGAKHVVQ-IASGQYHCLALTNNGELYA 165
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG NSYGQ S P+ + G + +A GG HS ++ +
Sbjct: 166 WGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ IY WG + G+LG ++ ++ ++PR++ + V CG HT LT +G +YA
Sbjct: 1 MAIYCWGNTAHGELGLGGIEE-EQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG T +PN+ ++ + + ++CG +H+L G++
Sbjct: 60 CGNNDHGQLGHDLDT-----LPNKRPQRLTSLENYI----ITCISCGTAHSLALTNWGQV 110
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP-VDWCVG--EVRKLAAGGGHSAVLTD 169
WG N+ GQ ++ P+P + +G V ++A+G H LT+
Sbjct: 111 FSWGSNAVGQLGHDAEN-GRQPTPRMIKAIGAKHVVQIASGQYHCLALTN 159
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH S + E++PR+V L G I +ACG HT A S+G +Y +
Sbjct: 268 VFTCGAGTFGQLGHGSCSN---EIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGF 324
Query: 64 GGCQAGQLGLG 74
G GQLG+G
Sbjct: 325 GLGGVGQLGIG 335
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PRR ++DV CG HT + G +Y G
Sbjct: 4 WGNASYGQLG---LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + VACG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA 182
+ WG +S GQ + S + C+ R + + L+D ++ C +
Sbjct: 106 YAWGLDSDGQLGLQGS---------EECIRVPRNIKS-------LSDIQIVQVACGYY-- 147
Query: 183 ESVTLSNASEI 193
S+ LS ASE+
Sbjct: 148 HSLALSKASEV 158
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 88 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 144
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 145 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 194
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 195 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 233
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 138 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 194
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 195 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 241
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 242 YSGALYTYGWSKYGQ 256
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 39 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 93
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 94 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 143
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 144 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 194
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 246 LYTYGWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 302
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 303 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 349
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 350 VFAWGRGTNGQLGIGESVDRNFPKIIE 376
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 15 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 53
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 54 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 113
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 114 PIKALHGIRIKQIACGDSHCLAVT 137
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG +VGQLGH + ++ PR + A+ + +A G H ALT+ G LYAWG
Sbjct: 115 VFSWGSNAVGQLGHDA--ENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLG+G + +P +P L+ VP + +ACG +H+ +
Sbjct: 173 SNSYGQLGIGTTSEK---VP---------MPTLIQSLAGVP--IAFIACGGNHSFAVSKS 218
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G I GWG N++GQ YP+ + VR ++ G S LT+
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTN 269
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG + + +K +P + +L G+ I +ACGG H+ A++ GA++ W
Sbjct: 167 ELYAWGSNSYGQLGIGT--TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGW 224
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R + T R + L GV+ ++CG ++ +G +
Sbjct: 225 GKNTFGQLGLNDLNSRCYP-------TQLRTLRSL----GVRYISCGDDFSVFLTNEGGV 273
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + + P V +G ++ ++A G H+
Sbjct: 274 FTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP---------RRVVALDGIFIKDVACGGVHTCALT 55
+Y G GQLGH D + LP +R+ +L+ I ++CG H+ ALT
Sbjct: 57 MYACGNNDHGQLGH------DLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALT 110
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ G +++WG GQLG + N R I + + VQ +A G H L
Sbjct: 111 NWGQVFSWGSNAVGQLGHDAE--------NGRQPTPRMIKAIGAKHVVQ-IASGQYHCLA 161
Query: 116 YMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+G+++ WG NSYGQ S P+ + G + +A GG HS ++ +
Sbjct: 162 LTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ IY WG + G+LG ++ ++ ++PR++ + V CG HT LT +G +YA
Sbjct: 1 MAIYCWGNTAHGELGLGGIEE-EQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGK 121
G GQLG T +PN+ R + + N + ++CG +H+L G+
Sbjct: 60 CGNNDHGQLGHDLDT-----LPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSP-VDWCVG--EVRKLAAGGGHSAVLTD 169
+ WG N+ GQ ++ P+P + +G V ++A+G H LT+
Sbjct: 115 VFSWGSNAVGQLGHDAEN-GRQPTPRMIKAIGAKHVVQIASGQYHCLALTN 164
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH S + E++PR+V L G I +ACG HT A S+G +Y +
Sbjct: 273 VFTCGAGTFGQLGHGSCSN---EIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGF 329
Query: 64 GGCQAGQLGLG 74
G GQLG+G
Sbjct: 330 GLGGVGQLGIG 340
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WGL S GQLG LQ ++ + +PR + +L I I VACG H+ AL+ ++ W
Sbjct: 105 VYAWGLDSDGQLG---LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGLG I + T + I L+ +Q VA G +H+ V G I
Sbjct: 162 GQNKYGQLGLG--------IDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIF 212
Query: 124 GWGYNSYGQ 132
GWG N +GQ
Sbjct: 213 GWGRNKFGQ 221
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQT 77
+ WG + GQLGL +
Sbjct: 212 FGWGRNKFGQLGLNDEN 228
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + K + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDYKKQAS--PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG K+ P+ + +L GI VA GG H+ LT GA++ W
Sbjct: 157 EVFCWGQNKYGQLGLGI--DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D YF N+ + + + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLHD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + + +E PR V L I +ACG H+ ALT+ G LYAWG
Sbjct: 105 LFSWGSNVEGQLGLDRVSATIRE--PRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLGLG SDT P LV VP + VACG HT+V +
Sbjct: 163 SNSDGQLGLG------------SDTKMELKPKLVHSLAAVP--IAFVACGGYHTIVISKS 208
Query: 120 GKIHGWGYNSYGQ 132
G + WG N++GQ
Sbjct: 209 GAVFAWGRNTFGQ 221
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG S EL P+ V +L + I VACGG HT ++ GA++AW
Sbjct: 157 ELYAWGSNSDGQLGLGS--DTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDG 120
G GQLGL SD RN+P + + N V ACG ++ DG
Sbjct: 215 GRNTFGQLGL-------------SDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ G YGQ + T P + +G V +++ G H+ L +
Sbjct: 262 GVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPS 312
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH + S E+LPR+++ L G + ++CG HT AL S+G +YAW
Sbjct: 263 VFTCGAGMYGQLGHGNKTS---EILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAW 319
Query: 64 GGCQAGQLG 72
G AGQLG
Sbjct: 320 GLGGAGQLG 328
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG ++ + PR V I+ +ACG +T A+T +G +Y+ G
Sbjct: 1 MFCWGSTIHGELGLGGIED-ENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + I FR ACG SHTLV G++
Sbjct: 60 NNDHGQLGQEKGRKRLQLISGIDPLAFRK------------AACGSSHTLVVNEWGQLFS 107
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
WG N GQ ++ + + +G + ++A G HS LT+
Sbjct: 108 WGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN 154
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLG + G K L + + +D + + ACG HT + G L++WG
Sbjct: 55 VYSCGNNDHGQLGQ---EKGRKRL--QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGK 121
GQLGL + R P +V G ++ +ACG H++ +G+
Sbjct: 110 SNVEGQLGL-----------DRVSATIRE-PRMVKTLGTKIIVQIACGLKHSIALTNNGE 157
Query: 122 IHGWGYNSYGQ 132
++ WG NS GQ
Sbjct: 158 LYAWGSNSDGQ 168
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + K + P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDYKKQAS--PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG K+ P+ + +L GI VA GG H+ LT GA++ W
Sbjct: 157 EVFCWGQNKYGQLGLGI--DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D YF N+ + + + CG HT ++G +
Sbjct: 215 GRNKFGQLGLN----------DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLHD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + +PR + L G+ IK +ACG H A+T G +++WG
Sbjct: 88 VYSWGWGDFGRLGH---GNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWG 144
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T +PN+ F I V+++A G HT GK++G
Sbjct: 145 RNQNGQLGLG-HTEDV-LVPNKV-AAFEGIA-------VKMLAAGAEHTAAVTESGKLYG 194
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
WG+ YG P V GE L A G
Sbjct: 195 WGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACG 231
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG L + L+P +V A +GI +K +A G HT A+T G LY W
Sbjct: 139 EVHSWGRNQNGQLG---LGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKI 122
G + G LGLG R+ +P E + VP + LVACG HT+ G +
Sbjct: 196 GWGRYGNLGLG--DRNDRLVPGE---------VAAVPGEKMNLVACGWRHTIAVANSGNL 244
Query: 123 HGWGYNSYGQ 132
+ +G++ YGQ
Sbjct: 245 YTFGWSKYGQ 254
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E LP + ALD I + CG HT A + S +Y
Sbjct: 35 VCSWGRGEDGQLGH-----GDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVY 89
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G N SD + + ++ +ACG SH L DG+
Sbjct: 90 SWGWGDFGRLGHG----------NSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGE 139
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+H WG N GQ + P+ V G V+ LAAG H+A +T++ L
Sbjct: 140 VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKL 192
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P +V AL I+ V+ G HT AL G LY W
Sbjct: 243 NLYTFGWSKYGQLGHGDFED---HLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGW 299
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ+G G N D + +V V V CG HT+ G ++
Sbjct: 300 GWNKFGQVGCG----------NTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVY 349
Query: 124 GWGYNSYGQ 132
WG + GQ
Sbjct: 350 SWGRGTSGQ 358
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQ+G C + D P+ + + + V CG HT A+T +G +Y+W
Sbjct: 295 ELYGWGWNKFGQVG-CG--NTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSW 351
Query: 64 GGCQAGQLGLG 74
G +GQLG G
Sbjct: 352 GRGTSGQLGHG 362
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-ELKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG L+ + P+++ L+GI I V+CG H+ AL+ +++WG
Sbjct: 96 VFAWGAGSEGQLGIGELK--EISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 154 KNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLCGTS 202
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A + ++ P+ VG ++ L + G H+AVLT
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLS--VGALKNLGVVYISCGAEHTAVLTQ 253
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVSQVDCGSYHT 299
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + P V AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMR-DGKIH 123
++GQLG P R ++ + +G V V CG HTL Y+ G++
Sbjct: 263 NRSGQLGYSPTPEK------------RGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVV 310
Query: 124 GWGY 127
+G+
Sbjct: 311 SFGH 314
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 32/184 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG GS+GQLGH L+S + +P++VV + G+ + ++CGG H+ A+T G LY
Sbjct: 67 VYSWGWGSMGQLGHGDLKSVN---IPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLYM 123
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNG-----VQLVACGHSHTLVY 116
WG GQLGL P E + ++P+ +P G + V+CG +HT
Sbjct: 124 WGESHWGQLGL----------PKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAAL 173
Query: 117 MRDGKIHGWGYNSYGQ----------AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
G+++ WG GQ +E P +D GE V ++A G HSA
Sbjct: 174 TNHGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSA 233
Query: 166 VLTD 169
+T+
Sbjct: 234 AVTE 237
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 25/153 (16%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
P+ + L + V+CG HT AL + GA+Y+WG GQLG G D
Sbjct: 36 FPQNIDGLQDEEVVAVSCGSRHTMALAASGAVYSWGWGSMGQLGHG-------------D 82
Query: 89 TYFRNIPILVV---PNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
NIP VV NG+++ ++CG H+ +DG ++ WG + +GQ K A +
Sbjct: 83 LKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLYMWGESHWGQLGLPKEHEAAH 142
Query: 144 PS-PVDWCVGE------VRKLAAGGGHSAVLTD 169
S PV+ + E + K++ GG H+A LT+
Sbjct: 143 ESLPVECPMPEGLTKECIVKVSCGGTHTAALTN 175
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKDVACGGVHTCALTSKGALY 61
+Y WG GQLG E LP +G+ I V+CGG HT ALT+ G +Y
Sbjct: 121 LYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRVY 180
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRD 119
WG +GQLG+G + F+ +ES +L NG V VACG H+
Sbjct: 181 IWGRGDSGQLGIG--STWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVTEK 238
Query: 120 GKIHGWGYNSYG 131
G ++ W YG
Sbjct: 239 GYVYIWXKEDYG 250
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 2 HLDIYTWGLGSVGQLGHCSL---QSGDKELL----PRRVVALDGIFIKDVACGGVHTCAL 54
H +Y WG G GQLG S + D+ LL P+ + +G + VACG H+ A+
Sbjct: 176 HGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAV 235
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
T KG +Y W G LG+G + + P + ++F +I + V
Sbjct: 236 TEKGYVYIWXKEDYGMLGIGQSSDXQN--PKSASSFFDDISXIXV 278
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + SF P + T NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-ELKEISFTPKKITTL----------NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG L+ + P+++ L+GI I V+CG H+ AL+ +++WG
Sbjct: 96 VFAWGAGSEGQLGIGELK--EISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 154 KNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLCGTS 202
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A + ++ P+ VG ++ L + G H+AVLT
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLS--VGALKNLGVVYISCGAEHTAVLTQ 253
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVSQVDCGSYHT 299
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL + P V AL + + ++CG HT LT G ++ +G
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGD 262
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMR-DGKIH 123
++GQLG P R ++ + +G V V CG HTL Y+ G++
Sbjct: 263 NRSGQLGYSPTPEK------------RGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVV 310
Query: 124 GWGY 127
+G+
Sbjct: 311 SFGH 314
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG D LP V AL + V+CG H+ A+ KG ++AWG
Sbjct: 44 VHSCGENSRGQLGRRGAPRWD---LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + +F P R I L NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGVG-ELKEINFTP-------RKITTL---NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLT 168
WG NS+GQ K + PSP E + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKE-FPSQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQL L + S +N+ GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYISCGDEHTAVLSQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ GG H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHT 299
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WGL S GQLG LQ ++ + +PR + +L I I VACG H+ AL+ ++ W
Sbjct: 105 VYAWGLDSDGQLG---LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGLG + + S +++ L +P VA G +H+ V G I
Sbjct: 162 GQNKYGQLGLGIECQK-----QTSPQLIKSL--LGIP--FMQVAAGGAHSFVLTLSGAIF 212
Query: 124 GWGYNSYGQ 132
GWG N +GQ
Sbjct: 213 GWGRNKFGQ 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSF 82
+ WG + GQLGL + FS
Sbjct: 212 FGWGRNKFGQLGLNDENGRFSL 233
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG QS ++ P + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 43 VYSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF+P + I L +Q V+CGH H+L DG +
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFS 150
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 151 WGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++W
Sbjct: 94 KVFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSW 151
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG +RS + IP + + IP+ VA G +H+ G
Sbjct: 152 GRNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSF 202
Query: 124 GWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
GWG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 148 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ ++CG+ HT V +G++
Sbjct: 206 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVI-------YISCGYEHTAVLTEEGQVF 257
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG D LP V AL + V+CG H+ A+ KG ++AWG
Sbjct: 44 VHSCGENSRGQLGRRGAPRWD---LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + +F P R I L NG+++ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGVG-ELKEINFTP-------RKITTL---NGIKIIQVSCGHYHSLALSKDSQV 149
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLT 168
WG NS+GQ K + PSP E + ++AAGG HS L+
Sbjct: 150 FSWGKNSHGQLGLGKE-FPSQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQL L + S +N+ GV ++CG HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYISCGDEHTAVLSQDGKVF 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ GG H+
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHT 299
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 181 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYV 237
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 238 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 287
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 288 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 328
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 234 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 290
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 291 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 340
Query: 123 HGWG 126
+ WG
Sbjct: 341 YMWG 344
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 75 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 131
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 132 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 182
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 183 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 232
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 287 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 341
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 342 MWGQCR-GQSVILPHHTHF 359
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG+G G+ GH + D+E P+R+ DG I + G HT A+T+ +YAWG
Sbjct: 248 LYSWGVGEKGECGHGKFE--DQET-PQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWG 304
Query: 65 GCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVV-----PNGVQLVACGHSH 112
+ GQ G G PQ +F N + ++ ++ P ++ +A G H
Sbjct: 305 DGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMH 364
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
TLV G+I +GYN GQ + P V+ + + ++AAG HS LT+
Sbjct: 365 TLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTN 422
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 15 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLG 74
+LG + +G K+ + V L IFIK VACG HT AL+ +G +Y WGG + G
Sbjct: 148 KLGLEGITTGSKKTF-KPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDR 206
Query: 75 PQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG 131
Q R + + ++ P+L+ ++ + CG H+L +G ++ WG G
Sbjct: 207 SQER-------KDNAKYK--PVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKG 257
Query: 132 QAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ + K P + + G+ + ++ AG H+ +T
Sbjct: 258 ECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAIT 295
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++++G + G+LG ++ L+P RV L + + ++ GG H+ +T G L+
Sbjct: 83 HAYVWSFGQNTKGELGTGHY---NEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLW 139
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G +LGL I S F+ + +L ++ VACG HTL ++G+
Sbjct: 140 MCGSNLHDKLGL-------EGITTGSKKTFKPVELL-TQIFIKQVACGDYHTLALSKEGQ 191
Query: 122 IHGWG---YNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLTDACSL 173
++ WG +N G + E+ A Y PV + +++++ G HS L D +L
Sbjct: 192 VYVWGGSLHNKRGDRSQERKDNAKY-KPVLLQSFAGKKIKQIDCGDFHSLALDDNGTL 248
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+++G GQLGH ++ D P+ V + VA G H+ LT+K +YA G
Sbjct: 374 IFSFGYNQQGQLGHNTV---DNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACG 430
Query: 65 GCQAGQLGL 73
Q GQ GL
Sbjct: 431 NNQYGQCGL 439
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I +WG G GQLGH S P + L +K+VACG + AL G LY WG
Sbjct: 130 IRSWGRGESGQLGHASFSHSS---TPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWG 186
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G R+ S IP R +P + + V L+ACG +H +V ++
Sbjct: 187 CNRYGQLGQG--DRTSSAIP-------RMLPSMNHRH-VHLMACGAAHIVVLTTSRDVYT 236
Query: 125 WGYNSYGQAANE-KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NSYGQ + + + P V G +++++ AG HS V+T
Sbjct: 237 WGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT 282
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE---LLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
D+YTWG S GQLGH G ++ L P+ V + G+ IK + G H+C +TS G +
Sbjct: 233 DVYTWGNNSYGQLGH-----GFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDI 287
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP----NGVQLVACGHSHTLVY 116
Y WG GQLG G D ++IP L+ P L+ G +
Sbjct: 288 YTWGRGDFGQLGHG-------------DMESKDIPTLLSPLDPKTQASLIVSGADFIMAM 334
Query: 117 MRDGKIHGWGYNSYGQ 132
G ++ WG N +GQ
Sbjct: 335 TYSGAVYSWGRNCFGQ 350
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVAL------------DGIFIKDVACGGVHT 51
+Y+WG GQLGH + P V++ D I + ++CG H
Sbjct: 340 VYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHV 399
Query: 52 CALTSKG-ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
A+T K L+AWG + GQLGL P+ SF IP E I V AC
Sbjct: 400 LAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMI--------VLAAACSE 451
Query: 111 SHTLVYMR--------DGKIHGWGYNSYGQ 132
+H++V D K+ WG S+GQ
Sbjct: 452 NHSVVVATMPGSGPKGDMKVFSWGRGSFGQ 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P+ VV+L G+ IK + CG H AL + G + +WG ++GQLG + S S P+ D
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHA--SFSHSSTPSIIDE 157
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ V+ VACG + + M G+++ WG N YGQ T + P +
Sbjct: 158 --------LASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPS 209
Query: 150 CVGE-VRKLAAGGGHSAVLTDA 170
V +A G H VLT +
Sbjct: 210 MNHRHVHLMACGAAHIVVLTTS 231
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 42/188 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD-VACGGVHTCALTSKGALYA 62
DIYTWG G GQLGH ++S D +P + LD + G A+T GA+Y+
Sbjct: 286 DIYTWGRGDFGQLGHGDMESKD---IPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYS 342
Query: 63 WGGCQAGQLGLG-----------------PQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
WG GQLG G P+ SF E D +
Sbjct: 343 WGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAI-----------SLSS 391
Query: 106 VACGHSHTL-VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
++CG H L + + + WG +GQ + ++ P P EV+K+
Sbjct: 392 ISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIP-----QEVKKMKG----M 442
Query: 165 AVLTDACS 172
VL ACS
Sbjct: 443 IVLAAACS 450
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 42 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 99 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 149
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 199
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 254 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 309 MWGQCR-GQSVILPHHTHF 326
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + P + AL GI IK +ACG H A+T +G + +
Sbjct: 76 MEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 132
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 133 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 182
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 183 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 221
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 126 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 183 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 229
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 230 YSGALYTYGWSKYGQ 244
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 27 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 81
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 82 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 131
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 132 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L L+P RV + G + VACG HT +++ GALY +
Sbjct: 181 DLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G IP++ + + + ++ G HT+ DGK++
Sbjct: 238 GWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGGFRHTMALTSDGKLY 287
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 288 GWGWNKFGQ 296
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 234 LYTYGWSKYGQLGHGDLED---HLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWG 290
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 291 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 337
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 338 VFAWGRGTNGQLGIGESVDRNFPKIIE 364
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 3 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 41
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 42 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 101
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 102 PIKALHGIRIKQIACGDSHCLAVT 125
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + ++ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRIRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + + +PRRV + L ++ACG + + A+ G +Y
Sbjct: 148 EVYTWGYNNSGQVGSGSTAN---QAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQM 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP P+ V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNRSNQSYPVPIT--VDKDRVIEIAACHSA 295
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDG-K 121
G GQLG G RS P +PI V + V ++ AC +HT G +
Sbjct: 258 GANSYGQLGTG--NRSNQSYP---------VPITVDKDRVIEIAACHSAHTSAAKTQGSQ 306
Query: 122 IHGWG 126
++ WG
Sbjct: 307 VYMWG 311
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG Q+ + PRR+ L G I ++ G G H T++G +Y
Sbjct: 42 EVFALGTNCSGCLGVGDTQNS---VEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYT 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + S +P + T N V VACG H+++ DG++
Sbjct: 99 WGHNAYSQLGNG--TTNNSLLPCQISTNLVN-------KKVTEVACGSHHSMILTSDGEV 149
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
+ WGYN+ GQ + + P V C+
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCL 178
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVILPHHTHF 350
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G GQLGH S Q+ E +P++V I + ++ACG HT A+ S +Y WG
Sbjct: 134 LYTWGQGVNGQLGHGSNQN---EEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWG 190
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
QAGQLG + S + F N +V + CG H++ +G+++
Sbjct: 191 FNQAGQLGF----QDLSRVNLPKKIMFFNQKEVV------QIQCGKKHSIALTVEGQVYS 240
Query: 125 WGYNSYGQ 132
WG N YGQ
Sbjct: 241 WGSNEYGQ 248
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG+ K ++ I + +A G H+ A T++G LY W
Sbjct: 78 NVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTW 137
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + IP + F++I +L +ACG SHT+ + ++
Sbjct: 138 GQGVNGQLGHG--SNQNEEIPKKVKE-FQDIRVLE-------IACGDSHTMAIISGNLVY 187
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
GWG+N GQ + + P + + EV ++ G HS LT
Sbjct: 188 GWGFNQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALT 233
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQLG L + LP++++ + + + CG H+ ALT +G +Y+WG
Sbjct: 186 VYGWGFNQAGQLGFQDLSRVN---LPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWG 242
Query: 65 GCQAGQLGL 73
+ GQLG+
Sbjct: 243 SNEYGQLGI 251
>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
Length = 1340
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 23/172 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y++G G GQLGH GD+E PRRV AL G F+ V+CG H+ ALT +GA Y
Sbjct: 149 EVYSFGHGGCGQLGH-----GDQESSATPRRVDALAGAFVVAVSCGQQHSLALTDRGAPY 203
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
A+G G+ GLG Q RS R++P V +P V ++ G H+L
Sbjct: 204 AFGSGFGGKTGLGDQ-RS------------RSLPRRVAGIPEPVAVLTAGAHHSLAATTS 250
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAC 171
G ++ +G N + Q + A+ P VD G V +L +GG H ++ DA
Sbjct: 251 GAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGRVVQL-SGGEHHSLAVDAA 301
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + VQ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVQDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + P + AL GI IK +ACG H A+T +G + +
Sbjct: 76 MEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 132
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 133 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 182
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 183 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 221
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 126 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 183 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 229
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 230 YSGALYTYGWSKYGQ 244
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 27 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 81
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 82 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 131
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 132 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 234 LYTYGWSKYGQLGHGDLED---HLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 290
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 291 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 337
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 338 VFAWGRGTNGQLGIGESVDRNFPKIIE 364
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 3 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 41
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 42 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 101
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 102 PIKALHGIRIKQIACGDSHCLAVT 125
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D P+ + AL G+ IK +ACG H A+T G + +WG
Sbjct: 90 VYSWGWGDFGRLGHGN--SSDL-FTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWG 146
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P + F+ + V++VA G HT DG+++G
Sbjct: 147 RNQNGQLGLG--TTEDSLVPQKIQA-FQGVS-------VKMVAAGAEHTAAVTEDGELYG 196
Query: 125 WGYNSYG 131
WG+ YG
Sbjct: 197 WGWGRYG 203
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + L+P +V ++G+ + VACG HT +++S G LY +
Sbjct: 193 ELYGWGWGRYGNLG---LGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTY 249
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + P++ + N+ + ++ G HT+ DGK++
Sbjct: 250 GWSKYGQLGHGDFEDHLT--PHKLEALQENL--------ISEISGGWRHTMALTSDGKLY 299
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 300 GWGWNKFGQ 308
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + L+P+++ A G+ +K VA G HT A+T G L
Sbjct: 138 MDGEVQSWGRNQNGQLG---LGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 194
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMR 118
Y WG + G LGLG R+ +P + T GV++ VACG HT+
Sbjct: 195 YGWGWGRYGNLGLG--DRNDRLVPEKVSTV----------EGVKMVKVACGWRHTISVSS 242
Query: 119 DGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 243 SGGLYTYGWSKYGQ 256
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+WG G GQLGH GD E L P + ALDG + V CG HT A + S +Y+W
Sbjct: 39 SWGRGEDGQLGH-----GDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSW 93
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P ++ R ++ +ACG SH L DG++
Sbjct: 94 GWGDFGRLGHGNSSDLFTPQPIKALHGLR----------IKQIACGDSHCLAVTMDGEVQ 143
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G V+ +AAG H+A +T+ L
Sbjct: 144 SWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 194
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L P ++ AL I +++ G HT ALTS G LY WG
Sbjct: 246 LYTYGWSKYGQLGHGDFED---HLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWG 302
Query: 65 GCQAGQLGLGPQTRSFSFI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ GQ+G+G S + P+E V ++CG HTL
Sbjct: 303 WNKFGQVGVGDNVDHCSPVQVKFPHEQK--------------VVHISCGWRHTLAVTERQ 348
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ + +S P ++
Sbjct: 349 NVFSWGRGTNGQLGHGESIDRNIPKMIE 376
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H+ AL S + +WG + GQLG G S TY + + V
Sbjct: 21 ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL------SPTYLSALD----GHEV 70
Query: 104 QLVACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG 161
V CG HT Y +++ WG+ +G+ + S+ + P P+ G ++++A G
Sbjct: 71 VSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGD 130
Query: 162 GHSAVLT 168
H +T
Sbjct: 131 SHCLAVT 137
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG + GQLG + S + + + LDGI + CG H+ AL G ++AWG
Sbjct: 396 VWTWGFNAFGQLGDGTKVSKNTAV---PISGLDGIIA--ITCGTSHSMALKDDGTVWAWG 450
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G +FI N + + N+ +G++ + CG+S + DG +
Sbjct: 451 DNQYGQLGNG------TFISNTTPSQVSNL------SGIKSIFCGYSTSFALKPDGTVWA 498
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N YG+ +T YP+ +G+++ ++ G H L +
Sbjct: 499 WGNNEYGELGKGFTTRVIYPTET-LNIGDIKAISIGSSHCLALKN 542
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + S P +V L GI K + CG + AL G ++AWG
Sbjct: 446 VWAWGDNQYGQLGNGTFISNTT---PSQVSNLSGI--KSIFCGYSTSFALKPDGTVWAWG 500
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G TR P E+ NI ++ ++ G SH L DG +
Sbjct: 501 NNEYGELGKGFTTRVI--YPTET----LNI------GDIKAISIGSSHCLALKNDGTVWA 548
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N YGQ + +T P V G + ++AGG HS L
Sbjct: 549 WGDNRYGQLGDGTTTIKSLPVQVSGISG-ITAISAGGSHSLAL 590
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + S + +P +V L GI ++CG ++ AL + G ++ WG
Sbjct: 296 VWAWGDNESGQLGDGTTNS---KYIPSQVQGLSGIV--SISCGFYYSMALKNDGTVWVWG 350
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T + +P +GV +ACG +H++ DG +
Sbjct: 351 DNTSGQLGDGTTTDRNTAVPVSG------------LDGVIAIACGVNHSMALRNDGTVWT 398
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG+N++GQ + P+ G + + G HS L D
Sbjct: 399 WGFNAFGQLGDGTKVSKNTAVPISGLDG-IIAITCGTSHSMALKD 442
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 46/200 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + LP +V + GI ++ GG H+ AL S G ++AWG
Sbjct: 546 VWAWGDNRYGQLGDGTTTI---KSLPVQVSGISGI--TAISAGGSHSLALKSDGTVWAWG 600
Query: 65 GCQAGQLGLGPQT----------------------RSFSFIPNE-------SDTYFRNIP 95
GQLG G + RSF+ + N+ SD+Y N+P
Sbjct: 601 QNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFA-LKNDGTVWVWGSDSY--NLP 657
Query: 96 I--LVVP------NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ + +P +G+ + CG H L DG + WG N++GQ + +T P V
Sbjct: 658 LEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQV 717
Query: 148 DWCVGEVRKLAAGGGHSAVL 167
G V+ +A GG S L
Sbjct: 718 SGLSG-VKAIAVGGNRSIAL 736
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + + L P +V L GI ++ G H+ AL G ++AWG
Sbjct: 246 VWTWGENDYGQLGDGTTAT---RLSPVQVQNLSGIIA--ISSGNSHSLALKDDGTVWAWG 300
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
++GQLG G T + +IP++ +G+ ++CG +++ DG +
Sbjct: 301 DNESGQLGDG--TTNSKYIPSQVQGL----------SGIVSISCGFYYSMALKNDGTVWV 348
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N+ GQ + +T PV G V +A G HS L +
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDG-VIAIACGVNHSMALRN 392
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + + V LDG+ +ACG H+ AL + G ++ WG
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAV---PVSGLDGVIA--IACGVNHSMALRNDGTVWTWG 400
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + + +P + +G+ + CG SH++ DG +
Sbjct: 401 FNAFGQLGDGTKVSKNTAVP------------ISGLDGIIAITCGTSHSMALKDDGTVWA 448
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N YGQ N PS V
Sbjct: 449 WGDNQYGQLGNGTFISNTTPSQV 471
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ ++ G ++ AL S G ++ WG GQLG G S P+ V
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLS-------------PVQVQN 273
Query: 101 -NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
+G+ ++ G+SH+L DG + WG N GQ + + + PS V G V
Sbjct: 274 LSGIIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIV 328
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
++G IK V+ G HT AL S G ++A G GQLG ++T N P
Sbjct: 173 IEGPIIK-VSGGESHTLALESDGTVWACGENDYGQLG-------------NNNTIDINSP 218
Query: 96 ILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
I V N V ++ G +++ DG + WG N YGQ + + P V G +
Sbjct: 219 IPVEGLNKVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG-I 277
Query: 155 RKLAAGGGHSAVLTD 169
+++G HS L D
Sbjct: 278 IAISSGNSHSLALKD 292
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
AL + G ++ WG GQLG G T + P GV VA +
Sbjct: 780 ALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSG------------LEGVAGVASSDTT 827
Query: 113 TLVYMRDGKIHGWGYNSYGQAAN-EKSTYAW 142
++V M DG I WG N++GQ N E+ Y +
Sbjct: 828 SMVLMNDGTIRAWGKNNFGQLGNGERGFYDY 858
Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ G + + + +P +V L G+ K +A GG + AL S G ++ WG
Sbjct: 692 VWAWGKNNFGQFGDGTTTTTN---IPVQVSGLSGV--KAIAVGGNRSIALKSDGTVWQWG 746
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ + P T + D I+ + N V L DGK+
Sbjct: 747 RIL---VSVSPSTVETWTTARQVDGLSE---IVSISNNVAL-----------KNDGKVFT 789
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
WG N YGQ + +T +PV G V +A+ S VL + +++
Sbjct: 790 WGANDYGQLGDGTTTARVTVAPVSGLEG-VAGVASSDTTSMVLMNDGTIR 838
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G +GQLGH ++ + PR VVA G ++ V+CG HT L G ++ +
Sbjct: 7 EVYSWGQGVLGQLGHGDEKT---QRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTF 63
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLG G S T + P LV V+ VACG HT + +G
Sbjct: 64 GRGNFGQLGQGA-----------SVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNG 112
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+++ WG YG+ + P V+ G EV +AAGG HS+V+ + +L
Sbjct: 113 QLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNL 166
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T+G G+ GQLG + + + P V AL G +K VACG HTCAL G LY W
Sbjct: 59 EVFTFGRGNFGQLGQGASVTANVST-PALVSALQGKHVKQVACGWHHTCALIDNGQLYTW 117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LG G + R S ES + V VA G H+ V + G +
Sbjct: 118 GSGEYGRLGHGDEVRQASPKLVES----------LQGKEVTFVAAGGFHSSVIIEGGNLL 167
Query: 124 GWGYNSYGQAANEKSTYAWYP---SPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG +GQ + T P V C+ ++A G H+ +LT +
Sbjct: 168 TWGGGYFGQLGHGDETDRKTPKMVKGVQQCI--AHEVACGTHHTLMLTQS 215
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G+LG + +K P + AL G+ + ++ GG H+ ALTS+G LY W
Sbjct: 217 EVWTWGSGEFGKLG---IGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTW 273
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
GG GQLG G D +NIP++V
Sbjct: 274 GGGDKGQLGHG-------------DENSQNIPVVV 295
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ TWG G GQLGH GD+ P+ V + +VACG HT LT ++
Sbjct: 165 NLLTWGGGYFGQLGH-----GDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVW 219
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
WG + G+LG+G + + PI++ GV ++ G H+
Sbjct: 220 TWGSGEFGKLGIGDEEKHAE-------------PIMITALQGVGVIHISTGGFHSAALTS 266
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+G ++ WG GQ + P V+
Sbjct: 267 EGVLYTWGGGDKGQLGHGDENSQNIPVVVE 296
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + ++ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRIRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ +Y+WG G G+LGH + S D P+ + AL GI IK +ACG H A+T G ++
Sbjct: 92 QMQLYSWGWGDFGRLGHGN--SSDV-FHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVH 148
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q GQLGLG S +P + F + V+++A G HT + DG
Sbjct: 149 SWGRNQNGQLGLG--NTEDSLLPQKIHA-FEGVC-------VKMIAAGAEHTAAILEDGD 198
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
++GWG+ YG P V GE L A G
Sbjct: 199 LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACG 238
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + + LLP+++ A +G+ +K +A G HT A+ G LY WG
Sbjct: 147 VHSWGRNQNGQLG---LGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWG 203
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LGLG R+ +P + + V + LVACG HT+ G ++
Sbjct: 204 WGQYGNLGLG--DRNDRLVPEKVSS--------VEGEKMVLVACGWRHTVTVSSSGDLYT 253
Query: 125 WGYNSYGQ 132
+G++ YGQ
Sbjct: 254 YGWSKYGQ 261
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + L+P +V +++G + VACG HT ++S G LY +
Sbjct: 198 DLYGWGWGQYGNLG---LGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTY 254
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + +A G HT+ DGK++
Sbjct: 255 GWSKYGQLGHG--DFEDHLVPHKLEALKDRF--------ISQIAGGWRHTMAVAGDGKLY 304
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 305 GWGWNKFGQ 313
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YT+G GQLGH + L+P ++ AL FI +A G HT A+ G LY W
Sbjct: 250 DLYTYGWSKYGQLGHGDFED---HLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGW 306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQ+G+ +D P+ V+ V VACG HTL +
Sbjct: 307 GWNKFGQVGV-------------ADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENK 353
Query: 121 KIHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 354 NVFSWGRGTSGQ 365
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA----CGGVHTCALTSKG-A 59
+ +WG G GQLGH GD E P + L G + +A CG HT A + +
Sbjct: 41 VCSWGRGEDGQLGH-----GDAEDRPVPTL-LSGFDVPGIASVVICGADHTTAYSDEQMQ 94
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
LY+WG G+LG G + F P E+ + I I + +ACG SH L
Sbjct: 95 LYSWGWGDFGRLGHGNSSDVFHPQPIEA---LQGIKI-------KQIACGDSHCLAVTDA 144
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
G++H WG N GQ + + P + G V+ +AAG H+A + + L
Sbjct: 145 GQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDL 199
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 28/156 (17%)
Query: 23 SGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+GD+E+ P + VAL V+ G H+ AL S A+ +WG + GQLG G
Sbjct: 9 AGDEEVPEAPEQTVAL-------VSAGANHSVALLSSKAVCSWGRGEDGQLGHG------ 55
Query: 81 SFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAAN 135
D R +P L+ VP +V CG HT Y + +++ WG+ +G+ +
Sbjct: 56 -------DAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGH 108
Query: 136 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
S+ ++P P++ G +++++A G H +TDA
Sbjct: 109 GNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDA 144
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V+ D + VACG HT ALT
Sbjct: 303 LYGWGWNKFGQVGVADNVDHCS---------PVQVIFPDEQKVAQVACGWRHTLALTENK 353
Query: 59 ALYAWGGCQAGQLGLG 74
+++WG +GQLG G
Sbjct: 354 NVFSWGRGTSGQLGHG 369
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G G LGHC +ELLPR V + I+ +A G HT A+T G +Y W
Sbjct: 176 QVFTWGYGGFGALGHCVYH---RELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTW 232
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESD--TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G + G G PNE + + L VP V V CG T V +G+
Sbjct: 233 GRDE----GDGRLGLGPGRGPNEGGGLSIPSKVKALTVP--VAAVFCGGFFTAVLTEEGQ 286
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
I WG NS + T W P P+ G V ++A+GG HS LTD
Sbjct: 287 IWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTD 335
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P +V AL + + V CGG T LT +G ++ WG +LG G +T + P
Sbjct: 257 IPSKVKALT-VPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKP---- 311
Query: 89 TYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
IP L GV+++ A G H+L +GK+ WG+ +GQ + P
Sbjct: 312 -----IPNL---EGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMV 363
Query: 147 VDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+D + V +A GG SA +TD L
Sbjct: 364 IDALADQRVVYIACGGSTSAAITDEGKL 391
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +WG G GQLGH S+Q+ + +P + AL + +ACGG + A+T +G LY W
Sbjct: 338 KVLSWGFGGHGQLGHPSIQN---QKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMW 394
Query: 64 GGCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G + QLG+ P+ + P + F + P+ V VA G SH +
Sbjct: 395 GNAKDSQLGVPGLPEVQ-----PCPVEVVFLMEDDGLGPHKVLSVAVGASHAM 442
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
I+ WG S +LG + G + P+ + L+G+ + +A GG H+ ALT +G + +W
Sbjct: 286 QIWNWGANSNYELGRGNKTGGWQ---PKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSW 342
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G GQLG + IP+++ V +ACG S + +G
Sbjct: 343 GFGGHGQLG-------------HPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEG 389
Query: 121 KIHGWG 126
K++ WG
Sbjct: 390 KLYMWG 395
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 48/197 (24%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-------------FIKD------ 43
L + +WG GS GQLG ++ L P V L + IK+
Sbjct: 47 LQLLSWGRGSSGQLGGGIEET---RLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTIT 103
Query: 44 --------VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
++CG H+ AL G ++ WG G+LG G + F +P
Sbjct: 104 KQEAIEVGISCGLFHS-ALLVDGNIWIWGKGDGGRLGFGHENPVF-------------VP 149
Query: 96 ILVVPN--GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
L PN + VA G H++ G++ WGY +G + P V E
Sbjct: 150 TL-NPNLDPAKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNE 208
Query: 154 -VRKLAAGGGHSAVLTD 169
+R +A G H+A +T+
Sbjct: 209 KIRHIATSGTHTAAITE 225
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALY 61
D+YTWG G+LG + S D P RV L GI ++ VACG HT A+T +G LY
Sbjct: 791 DVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQEGKLY 850
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDG 120
+WG GQLG+G + + + R + + + L VACG HTLV +D
Sbjct: 851 SWGSSSYGQLGVG-----------DRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQ 899
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
++ +G+ +GQ + P V+ + ++AG HS LT+
Sbjct: 900 RLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTN 949
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+ACG H A+ + G +Y WG G+LG G P R + + V
Sbjct: 777 LACGQDH-AAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPP-----LRVETLHMHGIHV 830
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 162
+ VACG HT+ ++GK++ WG +SYGQ P V+ G+ +A G
Sbjct: 831 RAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQL 890
Query: 163 HSAVLT 168
H+ VLT
Sbjct: 891 HTLVLT 896
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 35/147 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++++G G GQLGH ++ ++LP+ V L I ++ G H+ ALT+ G ++ +G
Sbjct: 901 LWSFGWGVHGQLGHGDVED---QILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFG 957
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGK 121
GQLG G +S +P+ + + V ++ CG+
Sbjct: 958 SSSFGQLGTGSIGKS-------------TVPVRLKALSSHHVSILTCGY----------- 993
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
Y++ +N + Y W SP++
Sbjct: 994 -----YSNIAITSNPQKVYTWGKSPLE 1015
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 20 SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQ-TR 78
SL ++ LLP V IK + G H LT+ G LY+WG +AGQLG+G + ++
Sbjct: 1047 SLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQ 1106
Query: 79 SFSFIPNES 87
S + N S
Sbjct: 1107 SVPVLINRS 1115
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + P+ V AL GI IK +ACG H A+T G + +WG
Sbjct: 95 VYSWGWGDFGRLGHGN---SSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWG 151
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P + F I V+++A G HT DG ++G
Sbjct: 152 RNQNGQLGLG--TTEDSLLPQKIQA-FEGIC-------VKMIAAGAEHTAAVTEDGDLYG 201
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
WG+ YG + P V GE L A G
Sbjct: 202 WGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACG 238
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+++ A +GI +K +A G HT A+T G L
Sbjct: 143 MGGEVQSWGRNQNGQLG---LGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDL 199
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ F+P + LV + L+ACG HT+ G
Sbjct: 200 YGWGWGRYGNLGLG--DRNDRFVPEKVS--------LVEGEKMVLIACGWRHTITVSSSG 249
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 250 ILYTYGWSKYGQ 261
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L P +V AL ++ G HT ALTS G LY WG
Sbjct: 251 LYTYGWSKYGQLGHGDFED---HLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 307
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGK 121
+ GQ+G G D+ P+ V+ V VACG HTL Y
Sbjct: 308 WNKFGQVGAG-------------DSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKN 354
Query: 122 IHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 355 VFAWGRGTSGQ 365
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+WG G GQLGH GD E L+P + D I V CG HT A + + +Y+W
Sbjct: 44 SWGRGEDGQLGH-----GDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSW 98
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P + + I I + +ACG SH L G++
Sbjct: 99 GWGDFGRLGHGNSSDVFTPQPVRA---LQGIKI-------KQMACGDSHCLAVTMGGEVQ 148
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N GQ + + P + G V+ +AAG H+A +T+
Sbjct: 149 SWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTE 195
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----V 99
V+ G H+ AL L +WG + GQLG G D R +P ++
Sbjct: 26 VSAGASHSVALLEGNVLCSWGRGEDGQLGHG-------------DAEDRLVPTVISGFDA 72
Query: 100 PNGVQLVACGHSHTLVYM-RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
P + V CG HT Y + +++ WG+ +G+ + S+ + P PV G +++++
Sbjct: 73 PR-ITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQM 131
Query: 158 AAGGGHSAVLT 168
A G H +T
Sbjct: 132 ACGDSHCLAVT 142
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V+ + VACG HT A T K
Sbjct: 303 LYGWGWNKFGQVGAGDSVDHCS---------PVQVMFPAEQKVAQVACGWRHTLAYTEKK 353
Query: 59 ALYAWGGCQAGQLGLG 74
++AWG +GQLG G
Sbjct: 354 NVFAWGRGTSGQLGHG 369
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG S QS + P + AL + I V+CG H+ A+ +G ++ WG
Sbjct: 49 VYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG 105
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G +++ SF+P + ++ I I+ V+CGH H+L DG++
Sbjct: 106 AGSEGQLGIG-ESKEISFMPTKINS-LAGIKIIQ-------VSCGHYHSLALSEDGQVFS 156
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N GQ N + A P V G + ++AAGG HS L+
Sbjct: 157 WGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAAGGTHSFALS 202
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GS GQLG +S + +P ++ +L GI I V+CG H+ AL+ G +++WG
Sbjct: 101 VFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 158
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG S + P + + IP+ VA G +H+ G G
Sbjct: 159 SNRQGQLGLGNNLCSQA-SPQKVKS-LEGIPL-------AQVAAGGTHSFALSLMGTSFG 209
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
WG N GQ A N + P + V ++ G H++VLT+
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 4 DIYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG GQLG CS S P++V +L+GI + VA GG H+ AL+ G
Sbjct: 153 QVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGTHSFALSLMGT 206
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG ++GQL L + S + + V ++CG+ HT V D
Sbjct: 207 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-------NVVYISCGYEHTSVLTED 259
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
G++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 260 GQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL-GPQTRSFSFIPNESD 88
PRR+ A G+ + A G H+ L S +Y+ G GQLG PQ+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 69
Query: 89 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSP 146
R PI + + LV+CG H++ G++ WG S GQ E ++ P+
Sbjct: 70 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 126
Query: 147 VDWCVG-EVRKLAAGGGHSAVLTD 169
++ G ++ +++ G HS L++
Sbjct: 127 INSLAGIKIIQVSCGHYHSLALSE 150
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQL + ++ P + AL + + ++CG HT LT G ++ +GG
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 267
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYM 117
+ QL P++ R P L+ G V + CG HT+ Y+
Sbjct: 268 SSSEQLQHSPRSG-------------RGGPQLIEGIGGHVSQIECGSYHTIAYV 308
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +Y+WG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + + +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGL-LGSEEYIRVP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYCHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYCHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG S QS + P + AL + I V+CG H+ A+ +G ++ WG
Sbjct: 200 VYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG 256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G +++ SF+P + ++ G+++ V+CGH H+L DG++
Sbjct: 257 AGSEGQLGIG-ESKEISFMPTKINSL----------AGIKIIQVSCGHYHSLALSEDGQV 305
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N GQ N + A P V G + ++AAGG HS L+
Sbjct: 306 FSWGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAAGGTHSFALS 353
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GS GQLG +S + +P ++ +L GI I V+CG H+ AL+ G +++WG
Sbjct: 252 VFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 309
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG S + P + + IP+ VA G +H+ G G
Sbjct: 310 SNRQGQLGLGNNLCSQA-SPQKVKS-LEGIPL-------AQVAAGGTHSFALSLMGTSFG 360
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
WG N GQ A N + P + V ++ G H++VLT+
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 4 DIYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG GQLG CS S P++V +L+GI + VA GG H+ AL+ G
Sbjct: 304 QVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGTHSFALSLMGT 357
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG ++GQL L + S + + V ++CG+ HT V D
Sbjct: 358 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-------NVVYISCGYEHTSVLTED 410
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
G++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 411 GQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 455
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL-GPQTRSFSFIPNESD 88
PRR+ A G+ + A G H+ L S +Y+ G GQLG PQ+
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 220
Query: 89 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSP 146
R PI + + LV+CG H++ G++ WG S GQ E ++ P+
Sbjct: 221 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 277
Query: 147 VDWCVG-EVRKLAAGGGHSAVLTD 169
++ G ++ +++ G HS L++
Sbjct: 278 INSLAGIKIIQVSCGHYHSLALSE 301
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQL + ++ P + AL + + ++CG HT LT G ++ +GG
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 418
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYM 117
+ QL P++ R P L+ G V + CG HT+ Y+
Sbjct: 419 SSSEQLQHSPRSG-------------RGGPQLIEGIGGHVSQIECGSYHTIAYV 459
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPS 312
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG S QS + P + AL + I V+CG H+ A+ +G ++ WG
Sbjct: 200 VYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG 256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G +++ SF+P + ++ I I+ V+CGH H+L DG++
Sbjct: 257 AGSEGQLGIG-ESKEISFMPTKINS-LAGIKIIQ-------VSCGHYHSLALSEDGQVFS 307
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N GQ N + A P V G + ++AAGG HS L+
Sbjct: 308 WGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAAGGTHSFALS 353
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GS GQLG +S + +P ++ +L GI I V+CG H+ AL+ G +++WG
Sbjct: 252 VFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 309
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG S + P + + IP+ VA G +H+ G G
Sbjct: 310 SNRQGQLGLGNNLCSQA-SPQKVKS-LEGIPL-------AQVAAGGTHSFALSLMGTSFG 360
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
WG N GQ A N + P + V ++ G H++VLT+
Sbjct: 361 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 4 DIYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG GQLG CS S P++V +L+GI + VA GG H+ AL+ G
Sbjct: 304 QVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGTHSFALSLMGT 357
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG ++GQL L + S + + V ++CG+ HT V D
Sbjct: 358 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-------NVVYISCGYEHTSVLTED 410
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
G++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 411 GQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 455
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL-GPQTRSFSFIPNESD 88
PRR+ A G+ + A G H+ L S +Y+ G GQLG PQ+
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 220
Query: 89 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSP 146
R PI + + LV+CG H++ G++ WG S GQ E ++ P+
Sbjct: 221 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 277
Query: 147 VDWCVG-EVRKLAAGGGHSAVLTD 169
++ G ++ +++ G HS L++
Sbjct: 278 INSLAGIKIIQVSCGHYHSLALSE 301
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQL + ++ P + AL + + ++CG HT LT G ++ +GG
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 418
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYM 117
+ QL P++ R P L+ G V + CG HT+ Y+
Sbjct: 419 SSSEQLQHSPRSG-------------RGGPQLIEGIGGHVSQIECGSYHTIAYV 459
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ-------VSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
+G N GQ + P V+ G V ++ G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCG 295
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L +Q VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIIQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKII-------QVSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGIGDIQS---TIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVVLPHLTHF 350
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 87 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 144 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 193
Query: 123 HGWGYNSYGQ 132
+GWG+ YG
Sbjct: 194 YGWGWGRYGN 203
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 137 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG D R +P V G + +VACG HT+
Sbjct: 194 YGWGWGRYGNLGLG-------------DRNDRLVPERVTSAGGEKMSMVACGWRHTISVS 240
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 YSGALYTYGWSKYGQ 255
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+WG G GQLGH GD E L P ++ ALD I V CG HT A + S+ +Y+W
Sbjct: 38 SWGRGEDGQLGH-----GDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL I ++ G HT ALTS G LY WG
Sbjct: 245 LYTYGWSKYGQLGHGDLED---HLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWG 301
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V +P+ ++ V+CG HTL
Sbjct: 302 WNKFGQVGVGNNLDQCS-------------PVQVRIPDDQKVVQVSCGWRHTLAVTERNN 348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 349 VFAWGRGTNGQLGIGESLDRNFPKIIE 375
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PRRV+ ++ G H+ AL S + +WG + GQLG G S P +
Sbjct: 14 PRRVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLS--PTQ--- 60
Query: 90 YFRNIPILVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSP 146
L + Q+V+ CG HT+ Y +++ WG+ +G+ + S+ + P P
Sbjct: 61 -------LSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLP 113
Query: 147 VDWCVG-EVRKLAAGGGHSAVLT 168
+ G ++++A G H +T
Sbjct: 114 IKALHGIRIKQIACGDSHCLAVT 136
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + ++ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRIRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|361066843|gb|AEW07733.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132524|gb|AFG47137.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132525|gb|AFG47138.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132526|gb|AFG47139.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132527|gb|AFG47140.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132528|gb|AFG47141.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132529|gb|AFG47142.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132530|gb|AFG47143.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132531|gb|AFG47144.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132532|gb|AFG47145.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132533|gb|AFG47146.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132534|gb|AFG47147.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132535|gb|AFG47148.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132536|gb|AFG47149.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132537|gb|AFG47150.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132538|gb|AFG47151.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132539|gb|AFG47152.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132540|gb|AFG47153.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
gi|383132541|gb|AFG47154.1| Pinus taeda anonymous locus 0_10151_01 genomic sequence
Length = 65
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 45/51 (88%)
Query: 13 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+GQLGH SLQ +KELLPRRVV L+GI +KD++CGG+HTCA+T +G+LYAW
Sbjct: 1 MGQLGHRSLQYDNKELLPRRVVGLEGIKVKDISCGGIHTCAVTMQGSLYAW 51
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYCHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 87 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 144 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 193
Query: 123 HGWGYNSYGQ 132
+GWG+ YG
Sbjct: 194 YGWGWGRYGN 203
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 137 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG D R +P V G + +VACG HT+
Sbjct: 194 YGWGWGRYGNLGLG-------------DRNDRLVPERVTSAGGEKMSMVACGWRHTISVS 240
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 YSGALYTYGWSKYGQ 255
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 38 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 245 LYTYGWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 302 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 25/149 (16%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
D+ P R V + ++ G H+ AL S + +WG + GQLG G
Sbjct: 8 DEVTAPPRTVLI-------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG---------- 50
Query: 85 NESDTYFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTY 140
D R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+
Sbjct: 51 ---DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD 107
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ P P+ G ++++A G H +T
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVT 136
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + P+ V AL GI IK +ACG H A+T G + +WG
Sbjct: 98 VYSWGWGDFGRLGH---GNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWG 154
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P + + F + V+++A G HT DG ++G
Sbjct: 155 RNQNGQLGLG--TTEDSLLPQKIQS-FEGVC-------VKMIAAGAEHTAAVTEDGDLYG 204
Query: 125 WGYNSYG 131
WG+ YG
Sbjct: 205 WGWGRYG 211
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF--IKDVACGGVHTCALTS-KGALY 61
+WG G GQLGH GD E L+P + D I V CG HT A + + +Y
Sbjct: 45 SWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVY 99
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G + F+ P ++ + I I + +ACG SH L G+
Sbjct: 100 SWGWGDFGRLGHGNSSDVFTPQPVKA---LQGIKI-------KQIACGDSHCLAVTMAGE 149
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ WG N GQ + + P + G V+ +AAG H+A +T+
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + LLP+++ + +G+ +K +A G HT A+T G L
Sbjct: 146 MAGEVQSWGRNQNGQLG---LGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNE---SDTYFRNIPIL 97
Y WG + G LGLG R+ +P + + F IP L
Sbjct: 203 YGWGWGRYGNLGLG--DRNDRLVPEKVSSVENMFLKIPSL 240
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+ G H+ AL + L +WG + GQLG G +P + P G+
Sbjct: 27 VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAED--RLVPTVLSGFDAAAP------GI 78
Query: 104 QLVACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG 161
V CG HT Y D +++ WG+ +G+ + S+ + P PV G +++++A G
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGD 138
Query: 162 GHSAVLTDACSLK 174
H +T A ++
Sbjct: 139 SHCLAVTMAGEVQ 151
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDT 223
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A S+G +Y
Sbjct: 278 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVILPHLTHF 350
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKII-------QVSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|350415154|ref|XP_003490550.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus
impatiens]
Length = 347
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+ G+G+ GQLGH L+ D PR V AL GI + ++ G HT +T +G LY W
Sbjct: 183 DIYSMGMGTRGQLGHNDLEDCDN---PRIVDALAGIKVTQISAAGWHTAVVTDQGDLYMW 239
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGL Q P D F N + V+ V CG++ T+ DG +
Sbjct: 240 GWNTHGELGLTKQESKVVATPTLVD--FTNDQDENIEVSVKKVQCGNTFTICMTDDGTLW 297
Query: 124 GWGYNSYGQ 132
G G N YGQ
Sbjct: 298 GCGCNKYGQ 306
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-------IFIKDVACGGVHTCALTS 56
D+Y WG + G+LG +S K + +V + +K V CG T +T
Sbjct: 235 DLYMWGWNTHGELGLTKQES--KVVATPTLVDFTNDQDENIEVSVKKVQCGNTFTICMTD 292
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
G L+ G + GQLG P+ S S + F + + + P ++ C
Sbjct: 293 DGTLWGCGCNKYGQLGQSPEKLS-------SSSKFIKLDVPLRPESIKDFKC 337
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P+RV +D +A G HT L G +Y+ G GQLG E
Sbjct: 159 IPKRVRFID------IAGGFDHTILLAENGDIYSMGMGTRGQLGHNDL---------EDC 203
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ--AANEKSTYAWYPSP 146
R + L Q+ A G HT V G ++ WG+N++G+ ++S P+
Sbjct: 204 DNPRIVDALAGIKVTQISAAGW-HTAVVTDQGDLYMWGWNTHGELGLTKQESKVVATPTL 262
Query: 147 VDWCVGE-------VRKLAAGGGHSAVLTDACSL 173
VD+ + V+K+ G + +TD +L
Sbjct: 263 VDFTNDQDENIEVSVKKVQCGNTFTICMTDDGTL 296
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQAS----PQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WGLGS GQLG + + + +PR + L + I VACG H+ AL+ G +++WG
Sbjct: 105 IFSWGLGSDGQLGLNNFEECVR--VPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG S S P + + IP QL A G +H+ G + G
Sbjct: 163 QNQFGQLGLGMHGSSIS-TPQIIQS-LQGIPF------AQLSAGG-AHSFAITLSGAVFG 213
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N +GQ + W+P+ + + V ++ G H+A LT
Sbjct: 214 WGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALT 258
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P VVALD I V+ G HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGH---EKPRKK--PEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGL +P RNI L + VQ+ VACG+ H+ + G++
Sbjct: 110 LGSDGQLGLNNFEECVR-VP-------RNIKCL---SDVQIAQVACGYRHSHALSKGGQV 158
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ + P + G +L+AGG HS +T
Sbjct: 159 FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT 206
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG G P+ + +L GI ++ GG H+ A+T GA++ WG
Sbjct: 158 VFSWGQNQFGQLGLG--MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGL + +D +F + + V V+CG HT ++G +
Sbjct: 216 RNKFGQLGLN----------DTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFT 265
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + + + P V +G V +++ G H+ T +
Sbjct: 266 FGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPS 312
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG L + P + +L + V+CG HT ALT +G ++ +G
Sbjct: 211 VFGWGRNKFGQLG---LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + P + NI V ++CG HTL + GK++
Sbjct: 268 AGGYGQLGHNSTNHEIN--PRKVFELMGNI--------VTQISCGRQHTLAFTPSSGKMY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G GQ + P+PV
Sbjct: 318 SFGLGGNGQLGTRSTCNRKSPAPV 341
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ G + DV CG HT L G +Y G
Sbjct: 4 WGNASYGQLG---LGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC---GHSHTLVYMRDGKI 122
GQLG +E R P VV Q++ G SHTL G+I
Sbjct: 61 NDLGQLG------------HEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQI 105
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLT 168
WG S GQ N P + C+ +V+ ++A G HS L+
Sbjct: 106 FSWGLGSDGQLGLNNFEECVRVPRNIK-CLSDVQIAQVACGYRHSHALS 153
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C K+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIEC-----QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVSALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ L G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDCLSG---KKIACLSYGSGPHVVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 199
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 254 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI +A GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLADIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGLDCKKQAS----PKLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQAS-----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 95/227 (41%), Gaps = 60/227 (26%)
Query: 5 IYTWGLGSVGQLGHCS-----LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+YTWG G++GQLGH S ++S +EL P+ AL+G I V G H+ A+ +G
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---------------------- 97
LY WG + +LGLG ++ +P E + + I I+
Sbjct: 131 LYVWGSNEYSKLGLG-ESSEMETLPREVEA-LKGIKIVDVSCGDYFTAAVDEDGKMYSWG 188
Query: 98 ----------------------------VVPNGVQL--VACGHSHTLVYMRDGKIHGWGY 127
+V GV + V CG HT+ +DG+I WG
Sbjct: 189 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGN 248
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
YG+ N +S P P+++ + V +AAG S LTD L
Sbjct: 249 GEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGEL 295
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I+ WG G G+LG+ D +P + + +A G + ALT KG LY+W
Sbjct: 242 EIWAWGNGEYGRLGNGE---SDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSW 298
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTY-FRNIPILVVP-NG--VQLVACGHSHTLVYMRD 119
GG QLG+G D Y +IP+LV NG V+ +A G+ H D
Sbjct: 299 GGNSQNQLGIGGGLA--------MDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTED 350
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 351 GRLYMWG 357
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 158 EVFAWGCNNSGQVGS---GSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYV 214
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV DG++
Sbjct: 215 WGYNGNGQLGLGSSGNHSTPCRIAALQGIR----------VQRVACGYAHTLVLTDDGQV 264
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 265 YAWGANSYGQLGTGNKSNQSYPTPV 289
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S P R+ AL GI ++ VACG HT LT G +YAW
Sbjct: 211 EVYVWGYNGNGQLG---LGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAW 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 268 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHV 317
Query: 123 HGWG 126
+ WG
Sbjct: 318 YMWG 321
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 52 EIFVLGTNCCGCLGLGDIQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 105
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ VACG H+LV D
Sbjct: 106 VFTWGHNAYNQLGNG--TTNHGSVPCHISTNLSNKQVIE-------VACGSYHSLVLTSD 156
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WG N+ GQ + + P V C+ V +A G S + D+
Sbjct: 157 GEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDS 209
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 263 QVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHV 317
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P S
Sbjct: 318 YMWGQCR-GQSVILPHLTHLS 337
>gi|383858545|ref|XP_003704761.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Megachile rotundata]
Length = 343
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+ G+G+ GQLGH L+ D P+ + AL GI + ++ G H+ +T +G LY W
Sbjct: 179 DIYSLGMGTRGQLGHGDLEDCDS---PKLIEALAGIKVTHISAAGSHSAVVTEQGDLYTW 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGL Q +P D F + V V+ V CG++ T+ M DG +
Sbjct: 236 GWNTNGELGLPNQESKVVAVPTLVD--FTDDQNKNVETFVKKVECGNNFTICMMDDGTLW 293
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
G G N YGQ + + P V
Sbjct: 294 GSGCNKYGQLGQLRESLLNTPKFV 317
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P+RV ++ VACG HT L G +Y+ G GQLG G S
Sbjct: 155 MPKRVQFVN------VACGFDHTILLAQNGDIYSLGMGTRGQLGHGDLEDCDS------- 201
Query: 89 TYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA--NEKSTYAWY 143
P L+ G+++ ++ SH+ V G ++ WG+N+ G+ N++S
Sbjct: 202 ------PKLIEALAGIKVTHISAAGSHSAVVTEQGDLYTWGWNTNGELGLPNQESKVVAV 255
Query: 144 PSPVDWCVGE-------VRKLAAGGGHSAVLTDACSL 173
P+ VD+ + V+K+ G + + D +L
Sbjct: 256 PTLVDFTDDQNKNVETFVKKVECGNNFTICMMDDGTL 292
>gi|340725486|ref|XP_003401100.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 1 [Bombus
terrestris]
gi|340725488|ref|XP_003401101.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 2 [Bombus
terrestris]
Length = 347
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G+G+ GQLGH L+ D PR V AL GI + ++ G HT +T +G LY W
Sbjct: 183 DVYSMGMGTRGQLGHNDLEDCDN---PRIVDALAGIRVTQISAAGWHTAVVTDQGDLYMW 239
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGL Q P D F N + V+ V CG++ T+ DG +
Sbjct: 240 GWNTNGELGLTKQESKVVATPTLID--FTNDQDENIEVSVKKVQCGNTFTICMTDDGTLW 297
Query: 124 GWGYNSYGQ 132
G G N YGQ
Sbjct: 298 GCGCNKYGQ 306
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 NIPILV-VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
N+PIL+ +P V+ + A G HT++ +G ++ G + GQ + P VD
Sbjct: 152 NVPILIDIPKRVRFIDIAGGFDHTILLAENGDVYSMGMGTRGQLGHNDLEDCDNPRIVDA 211
Query: 150 CVG-EVRKLAAGGGHSAVLTDACSL 173
G V +++A G H+AV+TD L
Sbjct: 212 LAGIRVTQISAAGWHTAVVTDQGDL 236
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-------IFIKDVACGGVHTCALTS 56
D+Y WG + G+LG +S K + ++ + +K V CG T +T
Sbjct: 235 DLYMWGWNTNGELGLTKQES--KVVATPTLIDFTNDQDENIEVSVKKVQCGNTFTICMTD 292
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFS 81
G L+ G + GQLG P+ S S
Sbjct: 293 DGTLWGCGCNKYGQLGQSPEKLSSS 317
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLGH S Q K LP+ V L + +ACG H+ ALT G LY+WG
Sbjct: 107 VFSWGDNECGQLGHASDQDIVK--LPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPN---ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
GQLG+ PN +S+T R +L +P V +ACG +H+ + +
Sbjct: 165 SNLYGQLGVSS--------PNDLQQSNTPMRLTTLLGIP--VSAIACGGNHSFLISKSSA 214
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDW--CVGEVRKLAAGGGHSAVLT 168
+ GWG N+ GQ T YP+ + +G VR +A G S LT
Sbjct: 215 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLT 262
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ L GI + +ACGG H+ ++ A++ W
Sbjct: 159 ELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGW 218
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ VACG ++ +G +
Sbjct: 219 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTIEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS 316
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH + K P ++ L I +ACG H+ AL+ G +++WG
Sbjct: 57 VYACGSNDYSQLGH---ELPTKR--PLQIPELQDYVITQIACGSRHSMALSEWGQVFSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
+ GQLG + SD +P +V V V +ACG +H+L G+
Sbjct: 112 DNECGQLG------------HASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGE 159
Query: 122 IHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG N YGQ ++ + P + +G V +A GG HS +++ + ++
Sbjct: 160 LYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAV 215
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y WG S GQLG ++ ++ L P R+ + +ACG HT LT+ G +YA
Sbjct: 1 MELYCWGNASHGQLGLGGIEE-EQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG T+ IP D I ACG H++ G++
Sbjct: 60 CGSNDYSQLGHELPTKRPLQIPELQDYVITQI------------ACGSRHSMALSEWGQV 107
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ + P V V + V ++A G HS LT
Sbjct: 108 FSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +Y +
Sbjct: 267 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGF 323
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLG TR +T N+P LV+ G + G TL+ D KI
Sbjct: 324 GLGSSGQLG----TR---------NTKSLNLPQLVI--GPWVSPSG--STLLQSNDAKIA 366
Query: 124 GWGYNSYG---QAANEKSTYAWYPSPVD 148
+ + Q+ S +A PVD
Sbjct: 367 SVIHQIFSGGDQSIVTTSMFADKIPPVD 394
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 60 LYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
LY WG GQLGLG Q + S IP + D+ V +ACGH HTL
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDS------------AVNQIACGHRHTLF 50
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
GK++ G N Y Q +E T P D+ + ++ A G HS L++
Sbjct: 51 LTASGKVYACGSNDYSQLGHELPTKRPLQIPELQDYVITQI---ACGSRHSMALSE 103
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLLGSEECIR-VP-------RNIKSLADIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAA-----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++++ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGLDCKKQAS----PKLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQAS-----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + + +PRRV + L + ++ACG + + A+ G +Y
Sbjct: 189 EVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 245
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG +HTLV +G+I
Sbjct: 246 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGCAHTLVLTDEGQI 295
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 296 YAWGANSYGQLGTGNKSNQSYPTTVT--VDKDRVIEIAACHSA 336
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 242 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAW 298
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G++
Sbjct: 299 GANSYGQLGTG----------NKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQV 348
Query: 123 HGWG 126
+ WG
Sbjct: 349 YMWG 352
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+++ G+ G LG +QS + P+R LD + K +AC G H T +G
Sbjct: 83 EVFVLGMNCSGCLGTGDVQS---TIEPKR---LDSLCGKKIACLSYGSGPHVVLATEEGE 136
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG QLG G T + +P + T N ++ V ACG H++V D
Sbjct: 137 VYTWGHNAYSQLGNG--TTNHGLVPCQVSTNLVNKKVIEV-------ACGSHHSMVLTSD 187
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 188 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCL 219
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL 60
IY WG S GQLG +G+K + P V I+ AC HT A T G +
Sbjct: 294 QIYAWGANSYGQLG-----TGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQV 348
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P F+
Sbjct: 349 YMWGQCR-GQSVVLPHLTHFA 368
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 148 EVYAWGYNNSGQVGSGSTAN---QAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG +HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGFAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPV 279
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS L PRR LD + K +AC G H T++G
Sbjct: 42 EIFVLGTNCSGCLGLGDVQS---TLEPRR---LDSLSDKKIACLSYGSGPHIILATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P + T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNGYTQLGNG--TTNHGLVPCQVSTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G+++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 147 GEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDT 199
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 254 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y+ G S GQLG QS ++ P + AL+ + + V+CG H+ A+ KG ++ WG
Sbjct: 1 YSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGA 57
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG+G + + SF+P + I L +Q V+CGH H+L DG + W
Sbjct: 58 GSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFSW 108
Query: 126 GYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 109 GRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 153
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++WG
Sbjct: 52 VFPWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG +RS + IP + + IP+ VA G +H+ G G
Sbjct: 110 RNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSFG 160
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
WG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 161 WGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 209
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 105 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 162
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ ++CG+ HT V +G++
Sbjct: 163 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVI-------YISCGYEHTAVLTEEGQVF 214
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 215 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 255
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +++CG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVILPHHTHF 350
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG S E PR V L I VACG H ALT+ G LY+WG
Sbjct: 137 LFSWGSNSEGQLGLNS--KNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWG 194
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG RS P +T +PI +ACG H++ + G I G
Sbjct: 195 SNSEGQLGLGVDIRS-EVKPKLINT-LAGVPI-------AFIACGGYHSIAISKSGAIFG 245
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 246 WGKNTFGQ 253
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+ G GQLGH + G K L + ++ LD K VACG HT A+ G L++WG
Sbjct: 87 IYSCGNNDYGQLGH---ERGRKRL--QLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWG 141
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGK 121
GQLGL S + P +V G + VACG H L +G+
Sbjct: 142 SNSEGQLGLN------------SKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGE 189
Query: 122 IHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
++ WG NS GQ + +S P ++ G + +A GG HS ++ +
Sbjct: 190 LYSWGSNSEGQLGLGVDIRSEVK--PKLINTLAGVPIAFIACGGYHSIAISKS 240
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG S GQLG ++S E+ P+ + L G+ I +ACGG H+ A++ GA++
Sbjct: 189 ELYSWGSNSEGQLGLGVDIRS---EVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFG 245
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRD 119
WG GQLGL +DT RN+P + + N + ACG ++ D
Sbjct: 246 WGKNTFGQLGL-------------NDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVD 292
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + G YGQ + + P V +G V +++ G H+ L +
Sbjct: 293 GGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS 344
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH S + E+LPR+V+ L G + ++CG HT AL S+G +YAW
Sbjct: 295 VFTCGAGMYGQLGH---GSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAW 351
Query: 64 GGCQAGQLGLGPQTRS 79
G AGQLG TRS
Sbjct: 352 GLGGAGQLG-NNSTRS 366
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
+L KG ++ WG + G+LGLG +P + D F+ + +Q +ACG ++
Sbjct: 26 SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVD--FKK------ASEIQQIACGENY 77
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEK 137
T+V DGKI+ G N YGQ +E+
Sbjct: 78 TVVITHDGKIYSCGNNDYGQLGHER 102
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G+LG ++ + L+P +V I+ +ACG +T +T G +Y+
Sbjct: 32 DMFCWGNTRHGELGLGGIED-EIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + I F+ VACG HT+ G++
Sbjct: 91 GNNDYGQLGHERGRKRLQLILGLDAFVFKK------------VACGAYHTIAVNEWGQLF 138
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG NS GQ N K+ P V + ++A G H+ LT+
Sbjct: 139 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTN 186
>gi|145483825|ref|XP_001427935.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395018|emb|CAK60537.1| unnamed protein product [Paramecium tetraurelia]
Length = 887
Score = 79.7 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
DIY++G G G LGH G EL +P++++ + + +ACG HT AL S G L+A
Sbjct: 103 DIYSYGYGEYGALGH----GGIIELPIPKKIIRISKV--DTIACGEYHTLAL-SNGDLFA 155
Query: 63 WGGCQAGQLGLGPQTRSFS---FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
WG GQLG+ + + F+ +YF N +QL+ACG H+L +
Sbjct: 156 WGRGFEGQLGIRKDVETAASPMFL-----SYFYK-------NKIQLIACGAYHSLAVDQQ 203
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-----------VG---------EVRKLAA 159
G ++GWG +GQ + PS +D+ VG +V ++
Sbjct: 204 GALYGWGEARFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRVGKFLPQETSFQVVSISG 263
Query: 160 GGGHSAVLTDACSL 173
G GHSA +T L
Sbjct: 264 GYGHSAAVTSTGEL 277
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQLG + + P + I+ +ACG H+ A+ +GALY W
Sbjct: 152 DLFAWGRGFEGQLG--IRKDVETAASPMFLSYFYKNKIQLIACGAYHSLAVDQQGALYGW 209
Query: 64 GGCQAGQLGLGPQTRS-----FSFIPNE--SDTYFRNIPILVVPNGVQLVAC--GHSHTL 114
G + GQLG G + F P + + + R L Q+V+ G+ H+
Sbjct: 210 GEARFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRVGKFLPQETSFQVVSISGGYGHSA 269
Query: 115 VYMRDGKIHGWGYNSYGQAAN----EKSTYAWYP 144
G+++ WG+N GQ N +KS+Y YP
Sbjct: 270 AVTSTGELYTWGFNQRGQLGNGDKDKKSSY--YP 301
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 30/149 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRV------------------VALDGIF-IKD 43
+Y WG GQLG +G K E LP R+ + + F +
Sbjct: 206 LYGWGEARFGQLG-----TGRKVSEQLPSRIDFPPEQPMNQSELRVGKFLPQETSFQVVS 260
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H+ A+TS G LY WG Q GQLG G + + S+ P ++I + +P G
Sbjct: 261 ISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKR---LMQDISGIQLP-GF 316
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V CG+ T + G + WG + G
Sbjct: 317 NKVMCGYYTTYAIDQKGGLWSWGGGNLGH 345
>gi|355694495|gb|AER99688.1| hect domain and RLD 4 [Mustela putorius furo]
Length = 181
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 16 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 70
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL E RNI L VQ VACG+ H+L + ++
Sbjct: 71 LDSDGQLGL--------LGSEECIRVPRNIKSLSDIQVVQ-VACGYYHSLALSKASEVFS 121
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ P + +G ++AAGG HS VLT
Sbjct: 122 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 167
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++++WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 118 EVFSWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 172
Query: 61 YAWG 64
+ WG
Sbjct: 173 FGWG 176
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + + +PRRV + L + ++ACG + + A+ G +Y
Sbjct: 188 EVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 244
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG +HTLV +G+I
Sbjct: 245 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGCAHTLVLTDEGQI 294
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 295 YAWGANSYGQLGTGNKSNQSYPTTVT--VDKDRVVEIAACHSA 335
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 241 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAW 297
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + V++ AC +HT + G++
Sbjct: 298 GANSYGQLGTG----------NKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQV 347
Query: 123 HGWG 126
+ WG
Sbjct: 348 YMWG 351
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+++ G+ G LG +QS + P+R LD + K +AC G H T +G
Sbjct: 82 EVFVLGMNCSGCLGTGDIQS---TIEPKR---LDSLCGKKIACLSYGSGPHVVLATEEGE 135
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG QLG G T + +P + T N ++ V ACG H++V D
Sbjct: 136 VYTWGHNAYSQLGNG--TTNHGLVPCQVSTNLVNKKVIEV-------ACGSHHSMVLTSD 186
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 187 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCL 218
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL 60
IY WG S GQLG +G+K + P V ++ AC HT A T G +
Sbjct: 293 QIYAWGANSYGQLG-----TGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQV 347
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P F+
Sbjct: 348 YMWGQCR-GQSVVLPHLTHFA 367
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRISALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPAPV 303
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N V VACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLMPCHISTNLSN-------KQVTEVACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRISALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPAPV 279
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N V VACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLMPCHISTNLSN-------KQVTEVACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 178
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 253 QVYAWGANSYGQLG-----TGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHV 307
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 308 YMWGQCR-GQSVILPHLTHFS 327
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS L PRR LD + K +AC G H T++G
Sbjct: 66 EIFVLGTNCSGCLGLGDVQS---TLEPRR---LDSLSDKKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG GQLG G T + +P+ T N V VACG H+LV D
Sbjct: 120 VFSWGHNAYGQLGNG--TINHGLVPSHISTNLSN-------KQVTEVACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ + L P FS
Sbjct: 333 MWGQCRGQSVTL-PHLTHFS 351
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G+ GQLG S LLPR V L I+ +ACG HT AL+ G +Y+WG
Sbjct: 143 VMCWGKGNSGQLGQGDWTS---SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWG 199
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + + +ACG H + D ++
Sbjct: 200 AGADGQLGVGKHQEETADVATPQKVRVDE------EEKFEFIACGSRHCMAITDDCRLFS 253
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
WG + G+ S + P+ V + +R +AAGG H+AVL+D
Sbjct: 254 WGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSD 300
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ +WG G+ GQLG SG+ + +P V AL + VACG HT +T G +
Sbjct: 90 EVVSWGWGNEGQLG-----SGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVM 144
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG +GQLG G T S +P T + ++ +ACG +HTL +G+
Sbjct: 145 CWGKGNSGQLGQGDWTS--SLLPRTVSTLYN--------EKIRQIACGMAHTLALSVNGE 194
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAVLTDACSL 173
I+ WG + GQ + A +P V E K +A G H +TD C L
Sbjct: 195 IYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRL 251
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 39/181 (21%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVV-----------------ALDGIFIKDVACGGVHT 51
G G G+LGH S +L P+R+ +L+G VACGG HT
Sbjct: 28 GWGEFGRLGHGDTLS---QLEPKRLRFDKRFPVSLSFTALAHESLNGAIY--VACGGHHT 82
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVAC 108
A+T G + +WG GQLG G + + + +P +V + V VAC
Sbjct: 83 VAVTEDGEVVSWGWGNEGQLGSG-------------NAFDQTVPAVVKALSNHRVCGVAC 129
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
G+ HT V G + WG + GQ T + P V E +R++A G H+ L
Sbjct: 130 GYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL 189
Query: 168 T 168
+
Sbjct: 190 S 190
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WGLG+ G+LG +S + RR +++ + I VA GG HT L+ G ++ G
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRR--SIENLRICYVAAGGHHTAVLSDNGEIFTCG 308
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
GQLG G + + + + +V +++ ACG +HTLV G++
Sbjct: 309 RGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEV 368
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG GQ + A P + G V ++ G HSA +
Sbjct: 369 FAWGAAEDGQLGTGGTEGANSPVELTSLRGLVGDVSCGLVHSAAV 413
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-------------DGIFIKDVACGGVH 50
+I+T G GS GQLGH D +L ++ AL D IK ACG H
Sbjct: 303 EIFTCGRGSYGQLGHGD---ADPQLTLKKARALRHGCLLLHIVQLRDKKIIK-AACGDTH 358
Query: 51 TCALTSKGALYAWGGCQAGQLGLG 74
T +++ G ++AWG + GQLG G
Sbjct: 359 TLVISTAGEVFAWGAAEDGQLGTG 382
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L IY+WG G G+LGH + +P + AL G+ I+ +ACG H A+T+ G +Y+
Sbjct: 77 LTIYSWGWGDFGRLGHGN---SSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYS 133
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P++ F + V+++A G HT GK+
Sbjct: 134 WGRNQNGQLGLGDTDD--SLVPHKL-LAFEGVS-------VKMLAAGAEHTAAVTDSGKL 183
Query: 123 HGWGYNSYGQ 132
+GWG+ YG
Sbjct: 184 YGWGWGRYGN 193
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG L D L+P +++A +G+ +K +A G HT A+T G LY W
Sbjct: 130 EVYSWGRNQNGQLG---LGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGW 186
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G LGLG R +P E +P V + +VACG HT+ + GK++
Sbjct: 187 GWGRYGNLGLG--DRGDRMLPAE-------VPA-VGDEKMCMVACGWRHTIAVSQSGKLY 236
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDACSL 173
+G++ YGQ + P V + E + +++ G H+ LT+A L
Sbjct: 237 TYGWSKYGQLGHGDYADHLLPHQVA-ALAEFNITQVSGGWRHTVALTEAGKL 287
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 88/174 (50%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ ++G G GQLGH GD E LLPR + AL+ I VACG HT A + ++ +Y
Sbjct: 26 VCSFGRGEDGQLGH-----GDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIY 80
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDG 120
+WG G+LG G N SD + + PI + ++ +ACG SH L DG
Sbjct: 81 SWGWGDFGRLGHG----------NSSDLFVPH-PIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+++ WG N GQ + + P + G V+ LAAG H+A +TD+ L
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKL 183
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH LLP +V AL I V+ G HT ALT G LY WG
Sbjct: 235 LYTYGWSKYGQLGHGDYAD---HLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWG 291
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G + + + +IP V V+CG HT+ ++
Sbjct: 292 WNKFGQVGSGD-------VDDHTSPQLISIP--GQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 343 WGRGTSGQ 350
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+ G HT AL S + ++G + GQLG G + D I + +
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHG----------DAEDRLLPRIIGALNDCEI 59
Query: 104 QLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG 161
LVACG HT Y I+ WG+ +G+ + S+ + P P+ G E+R++A G
Sbjct: 60 SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGD 119
Query: 162 GHSAVLT 168
H +T
Sbjct: 120 SHCLAVT 126
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHTCALTSKGALYA 62
+Y WG GQ+G + D P+ ++++ G + V+CG HT A+T K +Y+
Sbjct: 287 LYGWGWNKFGQVGSGDV---DDHTSPQ-LISIPGQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 63 WGGCQAGQLGLG 74
WG +GQLG G
Sbjct: 343 WGRGTSGQLGHG 354
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P+ + AL + I+ +ACG H A+T G + +
Sbjct: 90 MEVYSWGWGDFGRLGHGN--SSDL-FTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQS 146
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG T S +P + F+ + I ++VA G HT DG++
Sbjct: 147 WGRNQNGQLGLG--TTEDSLVPQKIQA-FQGVSI-------KMVAAGAEHTAAVTEDGEL 196
Query: 123 HGWGYNSYGQ 132
+GWG+ YG
Sbjct: 197 YGWGWGRYGN 206
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + L+P+++ A G+ IK VA G HT A+T G L
Sbjct: 140 MDGEVQSWGRNQNGQLG---LGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGEL 196
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G LGLG R+ +P + LV + + +VACG HT+ G
Sbjct: 197 YGWGWGRYGNLGLG--DRNDRLVPEKVS--------LVNGDKMIMVACGWRHTISVSSSG 246
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 247 GLYTYGWSKYGQ 258
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+WG G GQLGH GD E P ++ LDG+ I + CG HT + + S+ +Y+W
Sbjct: 41 SWGRGEDGQLGH-----GDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSW 95
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ P ++ + ++ +ACG SH L DG++
Sbjct: 96 GWGDFGRLGHGNSSDLFTPQPIKALHSLK----------IRQIACGDSHCLAVTMDGEVQ 145
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 146 SWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGEL 196
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L P +V AL +I ++ G HT ALTS G LY WG
Sbjct: 248 LYTYGWSKYGQLGHGDFE---DHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWG 304
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G+G S + + P + VQ ++CG HTL +
Sbjct: 305 WNKFGQVGVGDNIDHCSPVQVK-------FPHEQAHSLVQ-ISCGWRHTLAITERQNVFS 356
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
WG + GQ + +S P + EV GGH
Sbjct: 357 WGRGTNGQLGHGESMDRNLPKII-----EVLSADGSGGH 390
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 23 SGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
SG + P R V L ++ G H+ AL S + +WG + GQLG G
Sbjct: 9 SGSEVSGPIRQVIL-------ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-------- 53
Query: 83 IPNESDTYFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKS 138
D R P L +G+ +++ CG HT Y +++ WG+ +G+ + S
Sbjct: 54 -----DAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNS 108
Query: 139 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ + P P+ ++R++A G H +T
Sbjct: 109 SDLFTPQPIKALHSLKIRQIACGDSHCLAVT 139
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 6 YTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++WG S+GQLG + + DK P+ + L + VACG HT LT+ G LYAWG
Sbjct: 110 FSWGSDSMGQLGSNLGSHAQDK---PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWG 166
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ GLG ++ N+ T IL +P + L+ACG +HT + G + G
Sbjct: 167 ANSYGQCGLGNRS-------NKETTPQALSSILGIP--IALIACGSNHTFALSQSGAVFG 217
Query: 125 WGYNSYGQAANEKSTYAWYPS 145
WG NS+GQ + YP+
Sbjct: 218 WGKNSHGQLGLQDRESRCYPT 238
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 4 DIYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG S GQ C L +KE P+ + ++ GI I +ACG HT AL+ GA++
Sbjct: 161 DLYAWGANSYGQ---CGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFG 217
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGL Q R P T RN+ V ++CG T DG +
Sbjct: 218 WGKNSHGQLGL--QDRESRCYPTHLKT-LRNV-------KVCHISCGEDFTAFLTLDGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 163
G YGQ + + P V +G V ++A G H
Sbjct: 268 FTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRH 309
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G VGQLG + S D P V G + +ACG H+ AL G ++WG
Sbjct: 56 LYTCGSNEVGQLGRQT-NSADGTS-PVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWG 113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG S + + + + I L N +Q VACG HT+V +G ++
Sbjct: 114 SDSMGQLG--------SNLGSHAQDKPKIIKTLATKNVIQ-VACGSYHTVVLTNNGDLYA 164
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG NSYGQ +S P + +G + +A G H+ L+ +
Sbjct: 165 WGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS 212
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-V 99
I+ ++ G HT L++ G LY G + GQLG ++++ P+LV
Sbjct: 37 IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLG------------RQTNSADGTSPVLVDT 84
Query: 100 PNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVR 155
G L +ACG H++ G+ WG +S GQ + ++A + V
Sbjct: 85 FKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVI 144
Query: 156 KLAAGGGHSAVLTD 169
++A G H+ VLT+
Sbjct: 145 QVACGSYHTVVLTN 158
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG S QS + P + AL + I V+CG H+ A+ +G ++ WG
Sbjct: 42 VYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG 98
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G +++ SF+P + ++ I I+ V+CGH H+L DG++
Sbjct: 99 AGSEGQLGIG-ESKEISFMPTKINS-LAGIKII-------QVSCGHYHSLALSEDGQVFS 149
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N GQ N + A P V G + ++AAGG HS L+
Sbjct: 150 WGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAAGGTHSFALS 195
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GS GQLG +S + +P ++ +L GI I V+CG H+ AL+ G +++WG
Sbjct: 94 VFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 151
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG S + P + + IP+ VA G +H+ G G
Sbjct: 152 SNRQGQLGLGNNLCSQAS-PQKVKS-LEGIPL-------AQVAAGGTHSFALSLMGTSFG 202
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG N GQ A N + P + V ++ G H++VLT+
Sbjct: 203 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 251
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 4 DIYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG GQLG CS S P++V +L+GI + VA GG H+ AL+ G
Sbjct: 146 QVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGTHSFALSLMGT 199
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG ++GQL L + S + + ++ ++CG+ HT V D
Sbjct: 200 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV-------YISCGYEHTSVLTED 252
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
G++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 253 GQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 297
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL-GPQTRSFSFIPNESD 88
PRR+ A G+ + A G H+ L S +Y+ G GQLG PQ+
Sbjct: 12 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 62
Query: 89 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSP 146
R PI + + LV+CG H++ G++ WG S GQ E ++ P+
Sbjct: 63 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 119
Query: 147 VDWCVG-EVRKLAAGGGHSAVLTD 169
++ G ++ +++ G HS L++
Sbjct: 120 INSLAGIKIIQVSCGHYHSLALSE 143
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQL + ++ P + AL + + ++CG HT LT G ++ +GG
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 260
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 117
+ QL P++ R P L+ + V + CG HT+ Y+
Sbjct: 261 SSSEQLQHSPRSG-------------RGGPQLIEGIGGHVSQIECGSYHTIAYV 301
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSG--DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y WG GSV +L +G D +LLP++V +L I + ++ G H+ A+ S G L
Sbjct: 597 DVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVV--ISIGFYHSAAVKSNGELL 654
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMR 118
WG + GQLG G D + + IP +V + V V CG HT+ +
Sbjct: 655 TWGCGEDGQLGHG-------------DVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTK 701
Query: 119 DGKIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+GK+ WG + YGQ +K+ + +D + ++A G H+AVLT+
Sbjct: 702 NGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLD--KYHIIQIACGATHNAVLTN 753
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 48/208 (23%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ TWG G GQLGH GD + +P+ V ++ ++ V CG HT LT G ++
Sbjct: 652 ELLTWGCGEDGQLGH-----GDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVF 706
Query: 62 AWGGCQAGQLGLG-PQTRSFSFIPNESDTYF---------------RNIPILVVPNG--- 102
WG + GQLGLG Q + D Y N +LV NG
Sbjct: 707 TWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAM 766
Query: 103 -------------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
++ ++CGH T G ++ WG S + + T +
Sbjct: 767 GSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWG--SGQELGHGHGTSEAH 824
Query: 144 PSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
P V+ + +R+++ GG H A LTD+
Sbjct: 825 PKLVETLRNQSIRQISCGGRHMAFLTDS 852
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G +LGH G E P+ V L I+ ++CGG H LT G +Y
Sbjct: 804 DVYTWGSGQ--ELGH---GHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTS 858
Query: 64 GGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
G GQLG G Q R P + D+ + ++CG +H
Sbjct: 859 GKDPFGQLGHAAGDQNR-----PKKIDSLLKTT--------FMSISCGENH 896
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 99/268 (36%), Gaps = 75/268 (27%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH-------------- 50
++TWG GQLG L K P V +LD I +ACG H
Sbjct: 705 VFTWGTSEYGQLG---LGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFG 761
Query: 51 ----------------------------------TCALTSKGALYAWGGCQAGQLGLGPQ 76
T ALT G +Y WG Q +LG G
Sbjct: 762 NGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHG 819
Query: 77 TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ---A 133
T P +T RN ++ ++CG H GKI+ G + +GQ A
Sbjct: 820 TSEAH--PKLVET-LRN-------QSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA 869
Query: 134 ANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDAC-SLKELCEFRLAESV-TLSNA 190
A +++ P +D + ++ G H+A L D S ++ ++L E+ TL +
Sbjct: 870 AGDQNR----PKKIDSLLKTTFMSISCGENHNAALFDTTRSFRDKFCWKLLETQRTLVRS 925
Query: 191 SEIEDVASRTGSEALARLCERLREHLLH 218
I + S S L R E+L E++ H
Sbjct: 926 LNI--IRSIFLSPLLIRDREQLPENMKH 951
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++W
Sbjct: 21 KVFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSW 78
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG +RS + IP + + IP+ VA G +H+ G
Sbjct: 79 GRNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSF 129
Query: 124 GWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
GWG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 130 GWGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 179
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 75 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 132
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ ++CG+ HT V +G++
Sbjct: 133 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVI-------YISCGYEHTAVLTEEGQVF 184
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 185 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 225
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+CG H+ A+ KG ++AWG GQLG+G + + SF+P + I L +
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTK-------IKALAGIKII 57
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGG 161
Q V+CGH H+L DG + WG NS GQ K++ + P V G + ++AAGG
Sbjct: 58 Q-VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 116
Query: 162 GHSAVLT 168
HS L+
Sbjct: 117 THSFALS 123
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG LQ +E P+ + AL+ + ++ V+CG H+ A+ KG ++AWG
Sbjct: 55 VHSCGDNSRGQLGRRGLQ---REEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+G + + + IP + T G+++ V+CG+ H+L DG++
Sbjct: 112 AGSEGQLGIG-EFKEINLIPQKIKTL----------TGIKIIQVSCGNYHSLALSEDGQV 160
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 161 FSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALS 208
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 48/206 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + L+P+++ L GI I V+CG H+ AL+ G +++WG
Sbjct: 107 VFAWGAGSEGQLGIGEFK--EINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWG 164
Query: 65 GCQAGQLGLG--------PQ-TRSFSFIP--------------NESDTYF---------- 91
GQLGLG PQ RS IP + S T F
Sbjct: 165 SNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL 224
Query: 92 ----RNIPI---------LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
N+P+ + GV ++CGH HT V ++GK+ +G NS GQ + +
Sbjct: 225 AFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPT 284
Query: 139 TYAWYPSPVDWCVGEVRKLAAGGGHS 164
P ++ G V ++ G H+
Sbjct: 285 AEKTGPQLMEGIEGLVSQIDCGSYHT 310
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQL + PR V AL + + ++CG HT LT G ++ +G
Sbjct: 214 FGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGD 273
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM-RDGKI 122
GQLG P T + P L+ + V + CG HTL Y+ G++
Sbjct: 274 NSCGQLGHSP-------------TAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQV 320
Query: 123 HGWG 126
+G
Sbjct: 321 VSFG 324
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
++ A G H+ L S GA+++ G GQLG R P ++ R
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLR-------- 87
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLA 158
V+LV+CG H+L G++ WG S GQ E P + G ++ +++
Sbjct: 88 --VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVS 145
Query: 159 AGGGHSAVLTD 169
G HS L++
Sbjct: 146 CGNYHSLALSE 156
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G ++
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVFVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLTG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNAGLVPYHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 178
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 253 QVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 308 YMWGQCRGQSVTL-PHLTHFS 327
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G ++
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVFVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNAGLVPYHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 178
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 253 QVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 308 YMWGQCRGQSVTL-PHLTHFS 327
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G S GQLGH + P V ALD I V+CG H+ A+ +G ++AWG
Sbjct: 54 VYTCGSNSCGQLGH-----NKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWG 108
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
+ GQLGLG ++T R IP L+ + + V CG+ H + +DG+
Sbjct: 109 AGEEGQLGLG-----------TTETAVR-IPRLIKRLCDHRIAQVMCGNQHCIALSKDGQ 156
Query: 122 IHGWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N+ GQ K +P P+ G + K+ AGG HS L+
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALS 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG + GQLG L G+ +L P+ + +L GI + + GG H+ AL+ GA++ W
Sbjct: 157 LFTWGQNTSGQLG---LGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGW 213
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G +AGQLGL +D R +P + V ++CG HT +DG
Sbjct: 214 GKNKAGQLGL-------------NDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDG 260
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G S+GQ + + P V +G EV ++ G H+
Sbjct: 261 GLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHT 305
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG +Q +P + L + ++CG HT ALT G L+ +G
Sbjct: 210 VFGWGKNKAGQLGLNDIQD---RAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFG 266
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG G + + +P + ++ V + CG HTL + G ++
Sbjct: 267 DGSWGQLGHG--STANELLPRRV--------LELMGTEVSQITCGRHHTLAFAPSSGGVY 316
Query: 124 GWGYNSYGQAAN-----EKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDACSLKELC 177
+G NS+GQ +KS Y S + + G V K+ GG HS +L E
Sbjct: 317 AFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSNDQNSEYP 376
Query: 178 E-FRLAESVTLSNA-SEIEDVASRTGSEALARLCER 211
E FR+ + +SNA S I R S L +C +
Sbjct: 377 EDFRV---INISNAISPIN--YERLNSWRLKMMCNK 407
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG + GQLG+G + R+ F P + + G++ + CG H++ + D
Sbjct: 1 MLCWGKAKDGQLGIGVE-RNPMFEPRNCNVF--------TGRGLKEIVCGGQHSVFLLHD 51
Query: 120 GKIHGWGYNSYGQAANEK 137
G ++ G NS GQ + K
Sbjct: 52 GSVYTCGSNSCGQLGHNK 69
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G ++
Sbjct: 165 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFV 221
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 222 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 272 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 312
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 218 EVFVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 274
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 275 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 324
Query: 123 HGWG 126
+ WG
Sbjct: 325 YMWG 328
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 59 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 112
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 113 VFTWGHNAYSQLGNG--TTNAGLVPYHISTNLSNKQVIEV-------ACGSYHSLVLTSD 163
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 164 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 195
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 270 QVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 324
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 325 YMWGQCRGQSVTL-PHLTHFS 344
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL E RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGL--------LGSEECIRVPRNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSD-FFIN-------KKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG G GQLGH Q+ +LPR +V L I +VACG HT ++ G ++AW
Sbjct: 55 QVYTWGSGKSGQLGHGDSQN---LVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAW 111
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G GQLG+G T+ N P+ V +GV++ VACG +HT V G
Sbjct: 112 GWGHFGQLGVG-------------STHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESG 158
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
++ WG+ GQ + P V G V LA G H+ V+++
Sbjct: 159 HVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSE 208
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG----VHTCALTSKGALY 61
++WG + G LG L + D P ++AL G+ + VACGG H+ A+T +G +Y
Sbjct: 1 FSWGFNNDGALG---LGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVY 57
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMR 118
WG ++GQLG G D+ +P L+V N + VACG +HT+V +
Sbjct: 58 TWGSGKSGQLGHG-------------DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSK 104
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG+ +GQ + + P V G +V K+A G H+AV+T++
Sbjct: 105 AGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES 157
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G GQLG S + + P +V +LDG+ + VACG HT +T G +Y WG
Sbjct: 108 VFAWGWGHFGQLGVGSTHNSND---PVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGKIH 123
GQLG G Y + + + V +ACG +HT+V D +
Sbjct: 165 WGVNGQLGHGDDAS------QSRPMYVKKLHGIYVST----LACGLAHTVVVSEVDRAVF 214
Query: 124 GWGYNSYGQ 132
WG++ YGQ
Sbjct: 215 SWGWDEYGQ 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
+YTWG G GQLGH S + P V L GI++ +ACG HT ++ A+++W
Sbjct: 160 VYTWGWGVNGQLGHGDDASQSR---PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSW 216
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G F N S +++ Q +ACG S+TL G ++
Sbjct: 217 GWDEYGQLGHGGWDI-FGGNKNRSPRPIKDL---------QQIACGSSYTLALSSRGDVY 266
Query: 124 GWGYNSYGQ 132
+G+ GQ
Sbjct: 267 AFGWGKDGQ 275
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG GQLGH + G+K PR + L + +ACG +T AL+S+G +YA
Sbjct: 213 VFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDL-----QQIACGSSYTLALSSRGDVYA 267
Query: 63 WGGCQAGQLG 72
+G + GQLG
Sbjct: 268 FGWGKDGQLG 277
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRR------VVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GS GQLG SL G + PRR V L FI VA G +H+ AL+ G
Sbjct: 250 VYVWGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIALSKDG 309
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++ WGG + GQLGLG + F+ + + + P++ +A GH H+L
Sbjct: 310 EIWIWGGNRHGQLGLGDKLNRFAPVKLQGKEFQMLGPVIS-------IAAGHGHSLFLNS 362
Query: 119 DGKIHGWGYNSYGQA----ANEKSTYAWYPSPVD-WC 150
G + G N GQ + ++S+ ++ P P WC
Sbjct: 363 SGHVFSSGRNDAGQLGVGNSIDRSSISFVPIPNRIWC 399
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG+ +GQLG +GD P + V+ GG H+ A+TS G +Y
Sbjct: 198 LFAWGINHMGQLG-----TGDTADRFQPTPTKNSKDLLFFQVSAGGEHSMAVTSLGKVYV 252
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP----NGVQLVACGHSHTLVYMR 118
WG +GQLG S PN + R++ ++VP + VA G H++ +
Sbjct: 253 WGSGSSGQLG----QDSLDIGPNSVEPR-RSLEAILVPGLKDQFIVQVAAGWLHSIALSK 307
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD----WCVGEVRKLAAGGGHSAVLTDA 170
DG+I WG N +GQ + P + +G V +AAG GHS L +
Sbjct: 308 DGEIWIWGGNRHGQLGLGDKLNRFAPVKLQGKEFQMLGPVISIAAGHGHSLFLNSS 363
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y +G + GQLG SL + ++P V L + VA G + + + KG L++W
Sbjct: 97 DVYGFGSNNFGQLGTGSL---NNTVIPMIVPVLRNQNMSAVAAGEEFSVSSSLKGRLWSW 153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL ++ P V V+L + HTL R G +
Sbjct: 154 GRNYRGQLGL-----------TDAGINLCTYPPCSVEKSVKLT---NHHTLALSRSGILF 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
WG N GQ + + P+P + +++AGG HS +T
Sbjct: 200 AWGINHMGQLGTGDTADRFQPTPTKNSKDLLFFQVSAGGEHSMAVT 245
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L L +++ K V HT AL+ G L+AWG
Sbjct: 150 LWSWGRNYRGQLG---LTDAGINLCTYPPCSVE----KSVKLTNHHTLALSRSGILFAWG 202
Query: 65 GCQAGQLGLGPQTRSFSFIP--NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G F P N D F V+ G H++ GK+
Sbjct: 203 INHMGQLGTGDTADRFQPTPTKNSKDLLFFQ------------VSAGGEHSMAVTSLGKV 250
Query: 123 HGWGYNSYGQ 132
+ WG S GQ
Sbjct: 251 YVWGSGSSGQ 260
>gi|145508381|ref|XP_001440140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407346|emb|CAK72743.1| unnamed protein product [Paramecium tetraurelia]
Length = 887
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
DIY++G G G LGH G EL +P++++ + + +ACG HT AL S G ++A
Sbjct: 103 DIYSYGYGEYGALGH----GGIIELSIPKKIIRISKV--DTIACGEYHTLAL-SNGDIFA 155
Query: 63 WGGCQAGQLGLGPQTRSFS---FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
WG GQLG+ + + F+ +YF N +QL+ACG H+L +
Sbjct: 156 WGRGFEGQLGIRKDVETAASPMFL-----SYFYK-------NRIQLIACGAYHSLAVDQQ 203
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-----------VG---------EVRKLAA 159
G ++GWG +GQ + PS +D+ VG +V ++
Sbjct: 204 GALYGWGEARFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRVGKFLPQETSFQVVSISG 263
Query: 160 GGGHSAVLTDACSL 173
G GHSA +T L
Sbjct: 264 GYGHSAAVTSTGEL 277
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DI+ WG G GQLG + + P + I+ +ACG H+ A+ +GALY W
Sbjct: 152 DIFAWGRGFEGQLG--IRKDVETAASPMFLSYFYKNRIQLIACGAYHSLAVDQQGALYGW 209
Query: 64 GGCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTL 114
G + GQLG G P F + + R L Q+V+ G+ H+
Sbjct: 210 GEARFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRVGKFLPQETSFQVVSISGGYGHSA 269
Query: 115 VYMRDGKIHGWGYNSYGQAAN----EKSTYAWYP 144
G+++ WG+N GQ N +KS+Y YP
Sbjct: 270 AVTSTGELYTWGFNQRGQLGNGDKDKKSSY--YP 301
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 30/149 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVAL-----------DGIFIK--------D 43
+Y WG GQLG +G K E LP R+ L G F+
Sbjct: 206 LYGWGEARFGQLG-----TGRKVSEQLPSRIDFLLEKPMNQSELRVGKFLPQETSFQVVS 260
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H+ A+TS G LY WG Q GQLG G + + S+ P ++I + +P G
Sbjct: 261 ISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKR---LMQDISGIQLP-GF 316
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V CG+ T + G + WG + G
Sbjct: 317 SKVMCGYYTTYAIDQKGGLWSWGGGNLGH 345
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLGH +S P RV AL+ I +ACG H+ ALTS G ++AWG
Sbjct: 144 VYSCGSNDQGQLGHKKHRSK-----PERVDALEPYTITQIACGETHSLALTSNGQVFAWG 198
Query: 65 GCQAGQLGLGP-----QTRSFSFIP----------NESDTY------FRNIPILV---VP 100
+A QLGL P Q + S P +E D F P LV
Sbjct: 199 DNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTG 258
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 159
+ + + CG + +LV G + WG N+ GQ + P+ V G +R+LAA
Sbjct: 259 HKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAA 318
Query: 160 GGGHSAVLT 168
GG H+ LT
Sbjct: 319 GGRHTLALT 327
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG + GQL L++ +P V L GI I+ +A GG HT ALT G +Y+W
Sbjct: 279 DVFAWGDNTSGQLCLRELKTVP---VPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSW 335
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G Q GQLG+G DT IP + Q +ACG H++V G
Sbjct: 336 GNNQFGQLGVG-------------DTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETG 382
Query: 121 KIHGWGYNSYGQ 132
++ +G GQ
Sbjct: 383 GVYSFGAGGQGQ 394
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 13 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLG 72
V +L +L D PR V AL G I + CG + L+ +G ++AWG +GQL
Sbjct: 233 VDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLC 292
Query: 73 LGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
L R +P +P LV +P ++ +A G HTL +G+++ WG
Sbjct: 293 L----RELKTVP---------VPTLVKELYGIP--IRQLAAGGRHTLALTFNGQVYSWGN 337
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTD 169
N +GQ + PS + + +A G HS VLT+
Sbjct: 338 NQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTE 380
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG GQLG GD +P R+ L+ F +ACG H+ LT G +Y+
Sbjct: 332 VYSWGNNQFGQLG-----VGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYS 386
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGK 121
+G GQLG G + NE + R I L+ + Q V CG HT+V+ + K
Sbjct: 387 FGAGGQGQLGHGT-------LQNEINP--RMIFELMGKSASQ-VLCGRRHTIVFFPKTNK 436
Query: 122 IHGWGYNSYGQ 132
I+ +G GQ
Sbjct: 437 IYAFGLGGNGQ 447
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 20/147 (13%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++ WG + GQLG H EL V++ + +ACG HT L G
Sbjct: 85 VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTL-ASAIACGRAHTLFLVD-G 142
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+Y+ G GQLG + P D + P + +ACG +H+L
Sbjct: 143 QVYSCGSNDQGQLG----HKKHRSKPERVDA--------LEPYTITQIACGETHSLALTS 190
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPS 145
+G++ WG N Q S + PS
Sbjct: 191 NGQVFAWGDNKASQLGLTPSESSRQPS 217
Score = 43.1 bits (100), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESD-TYFRNIPILVVPNGVQLVACGHSHTLVY 116
G+++AWG GQLGL +P ++ F ++ + + + +ACG +HTL +
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASA---IACGRAHTL-F 138
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ DG+++ G N GQ ++K + P VD + ++A G HS LT
Sbjct: 139 LVDGQVYSCGSNDQGQLGHKK--HRSKPERVDALEPYTITQIACGETHSLALT 189
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG S GQLG S D P+RV +L+GI + VA GG H+ AL+ G +
Sbjct: 119 QVFSWGKNSQGQLGLGKEFPSQDS---PQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFG 175
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG AGQL L S RN+ GV ++CG+ HT V ++GK+
Sbjct: 176 WGNNSAGQLALSGNNVPVQSYKPRSIGALRNL-------GVIYISCGYEHTAVLTQNGKV 228
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + S P V+ G V ++ G H+
Sbjct: 229 FTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSYHT 270
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 27/175 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG ++ + P+++ L GI I V+CG H+ AL+ G +++WG
Sbjct: 67 VFAWGAGSEGQLGTGEVKGIN--FTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWG 124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F +S R++ G+ L VA G +H+ G
Sbjct: 125 KNSQGQLGLGKE-----FPSQDSPQRVRSL------EGIPLAQVAAGGAHSFALSVSGTS 173
Query: 123 HGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A N ++ P +G +R L + G H+AVLT
Sbjct: 174 FGWGNNSAGQLALSGNNVPVQSYKPR----SIGALRNLGVIYISCGYEHTAVLTQ 224
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P + L+ + + V+CG H+ A+ +G ++AWG GQLG G + + +F P + T
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG-EVKGINFTPKKIKT 95
Query: 90 YFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW-YPSP 146
G+++ V+CG H+L G++ WG NS GQ K + P
Sbjct: 96 L----------TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQR 145
Query: 147 VDWCVG-EVRKLAAGGGHSAVLT 168
V G + ++AAGG HS L+
Sbjct: 146 VRSLEGIPLAQVAAGGAHSFALS 168
>gi|383847392|ref|XP_003699338.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 516
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG SVGQLG S + D+ P ++ ALDG+ I+ V CG HT AL++ G LY W
Sbjct: 190 EVYSWGTNSVGQLGINSRKDVDR---PDKITALDGVVIEKVVCGYSHTLALSTTGVLYVW 246
Query: 64 GGCQAGQLGLGPQTRSFSFIPNE 86
GG GQLGL T + SF+P E
Sbjct: 247 GGNSCGQLGLN--TTANSFVPVE 267
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y L + G++ ++ S + V L+ I ++CG + +T G +Y+WG
Sbjct: 137 YFVALTNHGKVYMWNINSNVPNDFKQVNVTLNNKIITSISCGKNFSIVITDTGEVYSWGT 196
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIH 123
GQLG+ +R P++ + +GV + V CG+SHTL G ++
Sbjct: 197 NSVGQLGIN--SRKDVDRPDK----------ITALDGVVIEKVVCGYSHTLALSTTGVLY 244
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
WG NS GQ + ++ P + + +VR +AA
Sbjct: 245 VWGGNSCGQLGLNTTANSFVPVELKE-MKKVRDIAA 279
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I D+ACG + ALT+ G +Y W S +PN+ F+ + + +
Sbjct: 128 ILDIACGYDYFVALTNHGKVYMWN--------------INSNVPND----FKQVNVTLNN 169
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAA 159
+ ++CG + ++V G+++ WG NS GQ P + G V K+
Sbjct: 170 KIITSISCGKNFSIVITDTGEVYSWGTNSVGQLGINSRKDVDRPDKITALDGVVIEKVVC 229
Query: 160 GGGHSAVLT 168
G H+ L+
Sbjct: 230 GYSHTLALS 238
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG +VGQLG + ++++PR + ++ + +A G H ALT+ G LYAWG
Sbjct: 421 VYSWGSNAVGQLGQET--DTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWG 478
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLGLG S P LV VP + +ACG +H+ +
Sbjct: 479 SNAYGQLGLGMTNEKVS------------TPTLVQSLAGVP--IAFIACGGNHSFAVSKS 524
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G I GWG N++GQ +P+ + VR ++ G S LT
Sbjct: 525 GAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLT 574
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLGH +K P+ + AL+ I CG H+ ALT+ G +Y+WG
Sbjct: 368 MYSCGNNDHGQLGHDVESLPNKR--PQLLTALENYIITQACCGTAHSLALTNWGQVYSWG 425
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGK 121
GQLG E+DT + IP L + V +A GH H L G+
Sbjct: 426 SNAVGQLG------------QETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473
Query: 122 IHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG N+YGQ NEK + P+ V G + +A GG HS ++ + ++
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVS---TPTLVQSLAGVPIAFIACGGNHSFAVSKSGAI 527
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG + GQLG + +K P V +L G+ I +ACGG H+ A++ GA++ W
Sbjct: 473 ELYAWGSNAYGQLGLG--MTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGW 530
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R F T R + L GV+ V+CG ++ G +
Sbjct: 531 GKNTFGQLGLNDLNSRQFP-------TQLRTLRSL----GVRYVSCGDDFSVFLTAGGGV 579
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + P V +G ++ ++A G H+
Sbjct: 580 FTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHT 622
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH S + E+LPR V L G I +ACG HT A S+G +Y +
Sbjct: 579 VFTCGAGTFGQLGHGSC---NNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGF 635
Query: 64 GGCQAGQLGLG 74
G GQLG+G
Sbjct: 636 GLSGVGQLGIG 646
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
++PR++ + I ACG HT LT+ G +Y+ G GQLG ++ +PN+
Sbjct: 336 MVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVES-----LPNKR 390
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEK-STYAWYPSP 146
+ ++ CG +H+L G+++ WG N+ GQ E +T P
Sbjct: 391 PQLLTALENYIITQA----CCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRL 446
Query: 147 V-DWCVGEVRKLAAGGGHSAVLTDACSL 173
+ +V ++AAG H LT++ L
Sbjct: 447 IRSIAAKQVVQIAAGHYHCLALTNSGEL 474
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG + GQLG L S P ++ L + ++ V+CG + LT+ G ++ G
Sbjct: 527 IFGWGKNTFGQLGLNDLNSRQ---FPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCG 583
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GKIH 123
GQLG G + ++ + ++ + + +ACG HTL ++ GKI+
Sbjct: 584 AGTFGQLGHG----------SCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL-KELCEFRLA 182
G+G + GQ Y +P ++ G S +LT + + +EL +
Sbjct: 634 GFGLSGVGQLG--IGIVGNYNTP---------QIVRGPWQSQILTFSVQMSEELAAIKPD 682
Query: 183 ESVTLSNASEIEDV 196
++V L S +E +
Sbjct: 683 DTVELDLMSAVETI 696
>gi|26326847|dbj|BAC27167.1| unnamed protein product [Mus musculus]
Length = 377
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLGH +L++ EL PR + AL G+ + VA GG H+ L+ G +Y W
Sbjct: 181 QVFSWGAGRHGQLGHGTLEA---ELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYF-----------------------RNIPILV-V 99
G ++GQL L ++ + + E T + P LV +
Sbjct: 238 GWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALVDL 297
Query: 100 PNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EV 154
P G V +CG HT V R G+++ WG+ YGQ ++ ST P V++ V EV
Sbjct: 298 PLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEV 357
Query: 155 RKLAAG 160
R + G
Sbjct: 358 RAVTCG 363
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ ++ + G H L + G +++WG + GQLG G T P +L
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG--TLEAELEPR----------LLE 208
Query: 99 VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
G+++ VA G H++ G I+ WG+N GQ A
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA 246
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L IY+WG G G+LGH + +P + AL G+ I+ +ACG H A+T+ G +Y+
Sbjct: 77 LTIYSWGWGDFGRLGHGN---SSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYS 133
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P++ F + V+++A G HT GK+
Sbjct: 134 WGRNQNGQLGLGDTDD--SLVPHKL-LAFEGVS-------VKMLAAGAEHTAAVTDGGKL 183
Query: 123 HGWGYNSYGQ 132
+GWG+ YG
Sbjct: 184 YGWGWGRYGN 193
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG L D L+P +++A +G+ +K +A G HT A+T G LY W
Sbjct: 130 EVYSWGRNQNGQLG---LGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGW 186
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G LGLG R +P E +P V + +VACG HT+ + GK++
Sbjct: 187 GWGRYGNLGLG--DRGDRMLPAE-------VPA-VGDEKMCMVACGWRHTIAVSQSGKLY 236
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G++ YGQ + P V + +++ G H+ LT+A L
Sbjct: 237 TYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKL 287
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ ++G G GQLGH GD E LPR + AL+ I VACG HT A + ++ +Y
Sbjct: 26 VCSFGRGEDGQLGH-----GDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIY 80
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDG 120
+WG G+LG G N SD + + PI + ++ +ACG SH L DG
Sbjct: 81 SWGWGDFGRLGHG----------NSSDLFVPH-PIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+++ WG N GQ + + P + G V+ LAAG H+A +TD L
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKL 183
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH LLP +V AL I V+ G HT ALT G LY WG
Sbjct: 235 LYTYGWSKYGQLGHGDYAD---HLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWG 291
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G + + + +IP V V+CG HT+ ++
Sbjct: 292 WNKFGQVGSGD-------VDDHTSPQLISIP--GQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 343 WGRGTSGQ 350
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG- 102
V+ G HT AL S + ++G + GQLG G D R++P ++
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHG-------------DAEDRHLPRIIGALND 56
Query: 103 --VQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
+ LVACG HT Y I+ WG+ +G+ + S+ + P P+ G E+R++A
Sbjct: 57 CEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA 116
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 117 CGDSHCLAVT 126
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHTCALTSKGALYA 62
+Y WG GQ+G + D P+ ++++ G + V+CG HT A+T K +Y+
Sbjct: 287 LYGWGWNKFGQVGSGDV---DDHTSPQ-LISIPGQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 63 WGGCQAGQLGLG 74
WG +GQLG G
Sbjct: 343 WGRGTSGQLGHG 354
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ + G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R +Q VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------IQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPAPV 303
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI I+ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ V++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ AL G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDALSG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N V VACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSN-------KQVTEVACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV ++ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVVLPHLTHFS 351
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK---------------ELLPRRVVALDGIFIKDVACGG 48
++YTWG G+LGH Q +K +LP +V +L+GI K V+CGG
Sbjct: 150 ELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGG 209
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
T LT G +Y++G GQLG + + +F P + IP L + + C
Sbjct: 210 QFTVVLTENGEVYSFGNSMKGQLGYQSE-ETGNFQP-------KKIPDL---QNIINIDC 258
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G + GK++ WG N +GQ N +S Y P+ V G ++ ++ G A L
Sbjct: 259 GQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAAL 318
Query: 168 TDACSL 173
++ L
Sbjct: 319 SNEGKL 324
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y++G GQLG+ S ++G+ P+++ L I ++ CG + A++S G +Y W
Sbjct: 220 EVYSFGNSMKGQLGYQSEETGN--FQPKKIPDLQNII--NIDCGQQFSAAVSSSGKVYTW 275
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + PN+ + N I + +CG + +GK+
Sbjct: 276 GNNDHGQLG--NNQSIYQARPNQVTGFGGNKIINI--------SCGDNFIAALSNEGKLF 325
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
WGY + GQ + + P +++ ++ K+ GG H+A LT +L F
Sbjct: 326 TWGYGNDGQLGHSNRNDLYAPKQIEFKE-KIIKVDCGGTHTAFLTQN---NQLYLFGRGN 381
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLR 213
L IE A+ + + ++++
Sbjct: 382 EGQLGIGENIESEAAIRTTPKIVEFFKKMK 411
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G LGH + S + + P V L+ I IK ++CG H A++ G LY WG
Sbjct: 97 VYTWGKNKGGILGHYDITSFNM-IQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
G+LG Q +S + + ++P VQ V+CG T+V
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215
Query: 117 MRDGKIHGWGYNSYGQ 132
+G+++ +G + GQ
Sbjct: 216 TENGEVYSFGNSMKGQ 231
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G+ GQLG L + + + P+ V L I V + AL+ G +Y WG
Sbjct: 45 VYAWGYGNFGQLG---LANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G LG T SF+ I E NI I + ++CG H +DG+++
Sbjct: 102 KNKGGILGHYDIT-SFNMIQPELVEKLENIQI-------KQISCGPFHMAAISQDGELYT 153
Query: 125 WGYNSYGQAANE 136
WG +G+ +E
Sbjct: 154 WGNKDHGKLGHE 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G+ GQLGH S +L + + IK V CGG HT LT LY +G
Sbjct: 324 LFTWGYGNDGQLGH----SNRNDLYAPKQIEFKEKIIK-VDCGGTHTAFLTQNNQLYLFG 378
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTL 114
GQLG+G ES+ R P +V V V CG +TL
Sbjct: 379 RGNEGQLGIGENI--------ESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTL 423
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 46/207 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ TWG+G GQLGH Q+ ++ P+ + +L +I V CG HT LT G +Y W
Sbjct: 709 ELLTWGVGEEGQLGHGDTQN---QVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTW 765
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI----------------LVVPNGVQLVA 107
G + GQLGLG TR +P + + + I LV NG + A
Sbjct: 766 GSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGA 825
Query: 108 ----------------------CGHSHTLVYMRDGKIHGWGY-NSYGQAANEKSTYAWYP 144
CGH T G ++ WG G N+ + P
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQELGHGNNQTES---TP 882
Query: 145 SPVDWCVGE-VRKLAAGGGHSAVLTDA 170
V+ + +R+++ GG H+A LTD+
Sbjct: 883 KLVEALRNQSIRQISCGGRHTAFLTDS 909
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y WG GSV + + + +LLP ++ +L I + V+ G H+ A+ + G L
Sbjct: 654 DVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVV--VSIGFYHSAAVRANGELL 711
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + GQLG G +S T F + V CG HT+ ++GK
Sbjct: 712 TWGVGEEGQLGHGDTQNQVEPKVIQSLTSF----------WITQVQCGEKHTICLTKNGK 761
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
++ WG + YGQ +T P PV V ++A+G H AVLT++
Sbjct: 762 VYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNS 811
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G +LGH + Q+ E P+ V AL I+ ++CGG HT LT G ++
Sbjct: 861 DVYTWGTGQ--ELGHGNNQT---ESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTS 915
Query: 64 GGCQAGQLG 72
G GQLG
Sbjct: 916 GKDSFGQLG 924
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 67/178 (37%), Gaps = 59/178 (33%)
Query: 5 IYTWGLGSVGQLG-----------------------------HCSLQSGDKELL------ 29
+YTWG GQLG HC++ + KE+L
Sbjct: 762 VYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGA 821
Query: 30 ----------PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLG-PQTR 78
P V +L + I + CG T A++ G +Y WG Q +LG G QT
Sbjct: 822 AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTE 879
Query: 79 SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
S P + RN ++ ++CG HT G+I G +S+GQ ++
Sbjct: 880 S---TPKLVEA-LRN-------QSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQ 926
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 13/137 (9%)
Query: 1 MHLD----IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
+HLD + TWG S +LG + P R+ + I ++ G ++ ALT
Sbjct: 592 IHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE 651
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLV 115
G +Y WG P IP D +PI L + +V+ G H+
Sbjct: 652 NGDVYMWGRGSVKN----PPVPVLG-IPQIEDQL---LPIKLESLTDIVVVSIGFYHSAA 703
Query: 116 YMRDGKIHGWGYNSYGQ 132
+G++ WG GQ
Sbjct: 704 VRANGELLTWGVGEEGQ 720
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y+WG G G+LGH GD +P + AL G+ IK ++CG H A+T + +
Sbjct: 177 DVYSWGWGDFGRLGH-----GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 231
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q G+LGLG T S +P + F I I ++VA G H++ DG
Sbjct: 232 SWGRNQNGELGLG--TTKDSHVP-QKILAFEGIRI-------KMVAAGAEHSVAITEDGD 281
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
++GWG+ YG + P V+ ++ ++ G H+ ++ + L
Sbjct: 282 LYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 333
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG G+LG L + +P++++A +GI IK VA G H+ A+T G L
Sbjct: 226 MENKVLSWGRNQNGELG---LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 282
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 118
Y WG + G LGLG DT R IP V +G + +V+CG HT+
Sbjct: 283 YGWGWGRYGNLGLG-------------DTNDRLIPEKVNIDGDKIVMVSCGWRHTISISS 329
Query: 119 DGKIHGWGYNSYGQ 132
G ++ G++ YGQ
Sbjct: 330 SGGLYTHGWSKYGQ 343
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAWGG 65
+WG G GQLGH D LLP ++ A DG I V CG +T A + G +Y+WG
Sbjct: 127 SWGRGEDGQLGHGDT---DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G + F P + R ++ ++CG H L + K+ W
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRALQGLR----------IKQISCGDCHCLAVTMENKVLSW 233
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G N G+ + + P + G ++ +AAG HS +T+
Sbjct: 234 GRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 278
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + L+P +V +DG I V+CG HT +++S G LY
Sbjct: 281 DLYGWGWGRYGNLG---LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 336
Query: 64 GGCQAGQLGLG 74
G + GQLG G
Sbjct: 337 GWSKYGQLGHG 347
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 189 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYV 245
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 246 WGYNGNGQLGLGSGGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQV 295
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 296 YAWGANSYGQLGTGNKSNQSYPTPV--IVEKDRIIEIAACHSA 336
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L SG + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 242 EVYVWGYNGNGQLG---LGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 298
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ +++ AC +HT + G +
Sbjct: 299 GANSYGQLGTG----------NKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 348
Query: 123 HGWG 126
+ WG
Sbjct: 349 YMWG 352
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 83 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHVVLATTEGE 136
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 137 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 187
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 188 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 219
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V+ I+ AC HT A ++G +
Sbjct: 294 QVYAWGANSYGQLG-----TGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 348
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 349 YMWGQCRGQSVTL-PHLTHFS 368
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L ++ACG + + A+ + G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSA 319
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N V VACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSN-------KQVTEVACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V+ I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVVLPHLTHFS 351
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L I +ACG + + A+ G ++
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRVIEIAACHSA 319
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVFVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PR++ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDIQS---TIEPRKLDSLSG---KKIACLSYGSGPHVVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVVLPYLTHFS 351
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 27/174 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + P +V AL GI I V+CG H+ AL+ G +++WG
Sbjct: 94 VFAWGAGSEGQLGIGEFK--ELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWG 151
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F+ ES +++ G+ L VA G +H+ G
Sbjct: 152 NNSHGQLGLGKE-----FLSQESPQRVKSL------EGIPLAQVAAGGAHSFALSLSGTS 200
Query: 123 HGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLT 168
GWG N+ GQ A N ++ P +G +++L + G H+AVLT
Sbjct: 201 FGWGSNNAGQLALSGNNVPVQSYKPR----SIGALKELGVVYISCGSEHTAVLT 250
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++WG S GQLG KE L P+RV +L+GI + VA GG H+ AL+ G
Sbjct: 147 VFSWGNNSHGQLGL------GKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTS 200
Query: 61 YAWGGCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG AGQL L G S+ P R+I L GV ++CG HT V +D
Sbjct: 201 FGWGSNNAGQLALSGNNVPVQSYKP-------RSIGALK-ELGVVYISCGSEHTAVLTQD 252
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
GK+ +G NS GQ + + P V+ G V ++ G H+ V
Sbjct: 253 GKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVSQIDCGSYHTLV 299
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ G S GQLG + + P + AL+ + + ++CG H+ A+ KG ++AWG
Sbjct: 42 VHACGDNSCGQLGRRGVPHRKR---PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWG 98
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + +F P + L +Q V+CGH H+L +DG++
Sbjct: 99 AGSEGQLGIG-EFKELNFTP-------MKVKALAGIKIIQ-VSCGHYHSLALSQDGQVFS 149
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALS 195
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQL + PR + AL + + ++CG HT LT G ++ +G
Sbjct: 201 FGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGD 260
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 117
+GQLG GP T + P LV + V + CG HTLVY+
Sbjct: 261 NSSGQLGHGP-------------TAEKRGPQLVEGIDGLVSQIDCGSYHTLVYV 301
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L ++ACG + + A+ + G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSA 295
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N V VACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSN-------KQVTEVACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 178
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V+ I+ AC HT A ++G +
Sbjct: 253 QVYAWGANSYGQLG-----TGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHV 307
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 308 YMWGQCR-GQSVVLPHLTHFS 327
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 242 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYV 298
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG T R + + VQ VACG++HTLV +G++
Sbjct: 299 WGYNGNGQLGLGSS--------GNQSTPCRIAALQGI--CVQRVACGYAHTLVLTDEGQV 348
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 349 YVWGANSYGQLGTGNKSNQSYPTPV 373
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ VACG HT LT +G +Y W
Sbjct: 295 EVYVWGYNGNGQLG---LGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVW 351
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 352 GANSYGQLGTG----------NKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHV 401
Query: 123 HGWG 126
+ WG
Sbjct: 402 YMWG 405
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 136 EIFVLGTNCCGCLGLGDIQS---TIEPRRLDSLSG---KKIACFSYGSGPHVILATTEGE 189
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 190 IFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 240
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
G++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 241 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD 292
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 347 QVYVWGANSYGQLG-----TGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHV 401
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P SFS
Sbjct: 402 YMWGQCR-GQSVILPHLTSFS 421
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG +L D+ P V G + VA GGVH+ ALTS G + AWG
Sbjct: 109 VLAWGTNHFGQLGDGTLI--DRSA-PVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWG 165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLG G TR R P+ ++P+GV + VA SH+L G
Sbjct: 166 GNGVGQLGDGSTTR-------------RTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD---ACSLKELC 177
WG N GQ + + P V +G EV +AAG HS +T A +
Sbjct: 213 ALAWGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNG 272
Query: 178 EFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLL 217
+L + T++ ++ + VA G+E A + RL L
Sbjct: 273 TGQLGDGTTINRSTPVS-VALPLGAEVTAVVAGRLHSAAL 311
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG+ S + +P V G + VA G H+ ALTS G + AWG
Sbjct: 57 LLAWGKNDNGQLGNGSTTGSN---VPIAVSLPLGTTVTAVAAGRFHSLALTSAGTVLAWG 113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
GQLG + R+ P+ V +P G V VA G H++ G
Sbjct: 114 TNHFGQLG-------------DGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSVGT 160
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ WG N GQ + +T P G V +AA HS +T A
Sbjct: 161 VLAWGGNGVGQLGDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSA 210
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 19/164 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG + P V G + V G +H+ ALT+ G AWG
Sbjct: 268 WGYNGTGQLGDGTTI---NRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNG 324
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG---HSHTLVYMRDGKIHG 124
N S+ ++ P G L A HT+ DG
Sbjct: 325 F-------GQLGNGGGSNSSEAVEVSL-----PTGTTLAAIASRDSDHTIAIAGDGTALA 372
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG N +GQ + +T P PV G + AAG H+ L
Sbjct: 373 WGSNIFGQLGDGTTTNPSTPVPVALPTGITLLTTAAGSDHTLAL 416
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG T R + + VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSS--------GNQPTPCRVAALQGI--HVQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+P+ + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAA 315
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHT-LVYMRDGK 121
G GQLG G N+S+ + PI V + +++ AC +HT + G
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPT-PISVEKDRIIEIAACHSTHTSAAKTQGGN 330
Query: 122 IHGWG 126
++ WG
Sbjct: 331 VYMWG 335
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCYISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WGYN+ GQ + + P V C+ V +A G S + DA
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDA 223
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P + I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNV 331
Query: 61 YAWGGCQAGQLGLGPQTR 78
Y WG C+ + L TR
Sbjct: 332 YMWGQCRGQSVTLPHLTR 349
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG D R VA+ G+ + +A GG HTCALTS G +
Sbjct: 80 EVWCWGYNWSGQLG-------DGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGV 132
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
WGG GQLG G T R+ P+ V +P+GV +A G +HT M
Sbjct: 133 MCWGGNYFGQLGDGSYTD-------------RSTPVAVSGLPSGVTAIAAGGAHTCALMS 179
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WGYN GQ + + Y P V EV +AAG H+ LT
Sbjct: 180 SGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALT 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S P V L + +A GG HTCALTS G ++ WG
Sbjct: 285 VWCWGRNDSGQLGDGSFT---NRSTPGAVGGLP-SGVTAIAAGGAHTCALTSSGGVWCWG 340
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
G +GQLG G T R+ P V +P+GV +A G +HT G +
Sbjct: 341 GNDSGQLGDGSYTD-------------RSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGV 387
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N YGQ + +T P V V +AAG H+ LT
Sbjct: 388 WCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAIAAGNYHTCALT 433
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++ WGL + GQLG S + LP V+A +A G HTCALT +
Sbjct: 540 VWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMA--------IAAGNYHTCALTGSDGV 591
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
+ WG GQLG G T R+ P+ V +P+GV +A G+ HT
Sbjct: 592 WCWGTNSDGQLGDGTTTN-------------RSTPVAVSGLPSGVTAIAAGNYHTCALTS 638
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WGYN GQ + +T P V V +AAG H+ LT
Sbjct: 639 SGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGDEHTCALT 688
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG S GQLG D R VA+ G+ + +A G HTCALTS G ++
Sbjct: 591 VWCWGTNSDGQLG-------DGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVW 643
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T R+ P V +P+GV +A G HT
Sbjct: 644 CWGYNLSGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGDEHTCALTGS 690
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WG N YGQ + +T P V V +AAG H+ LT
Sbjct: 691 GGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCALT 739
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S D+ P V L + +A GG HTCA TS G ++ WG
Sbjct: 336 VWCWGGNDSGQLGDGSYT--DRST-PGAVSGLP-SGVTAIAAGGAHTCARTSSGGVWCWG 391
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG G T R+ P V +P+GV +A G+ HT +
Sbjct: 392 GNFYGQLGDGTTTD-------------RSTPGAVSGLPSGVTAIAAGNYHTCALTGSDGV 438
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG N YGQ + +T P V V +AAG H+ LT +
Sbjct: 439 WCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSS 486
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S P V L + +A GG +TCALTS G ++ WG
Sbjct: 234 VWCWGDNGFGQLGDGSFT---DSSTPAAVGGLP-SGVTAIAAGGRYTCALTSSGGVWCWG 289
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
+GQLG G T R+ P V +P+GV +A G +HT G +
Sbjct: 290 RNDSGQLGDGSFTN-------------RSTPGAVGGLPSGVTAIAAGGAHTCALTSSGGV 336
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG N GQ + T P V V +AAGG H+ T +
Sbjct: 337 WCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTSS 384
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++ WG GQLG + + G LP V A +A G HTCALTS G +
Sbjct: 438 VWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTA--------IAAGNYHTCALTSSGGV 489
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
+ WG +GQLG G T R+ P V +P+GV +A G HT M
Sbjct: 490 WCWGRNDSGQLGDGTTTN-------------RSTPGAVGGLPSGVTAIAAGDYHTCALMS 536
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WG N+ GQ + T + P V V +AAG H+ LT
Sbjct: 537 SGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALT 586
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
+ WG GQLG D R VA+ G+ + +A GG HTCAL S G ++
Sbjct: 132 VMCWGGNYFGQLG-------DGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALMSSGGVW 184
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG + T + P+ V +P+ V +A G++HT
Sbjct: 185 CWGYNLSGQLG-------------DGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGS 231
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG N +GQ + T + P+ V V +AAGG ++ LT +
Sbjct: 232 GGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCALTSS 282
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ +A G HTCALT G ++ WG +GQLG G T R+ P+ V
Sbjct: 62 VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTD-------------RSTPVAVSG 108
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
+P+GV +A G +HT G + WG N +GQ + T P V V +A
Sbjct: 109 LPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIA 168
Query: 159 AGGGHSAVL 167
AGG H+ L
Sbjct: 169 AGGAHTCAL 177
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 71/168 (42%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P V L + +A G HTCAL S G ++ WG
Sbjct: 489 VWCWGRNDSGQLGDGTTT---NRSTPGAVGGLP-SGVTAIAAGDYHTCALMSSGGVWCWG 544
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G T S + P+ V +P+GV +A G+ HT +
Sbjct: 545 LNNRGQLGDGSYTDS-------------STPVAVGGLPSGVMAIAAGNYHTCALTGSDGV 591
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG NS GQ + +T P V V +AAG H+ LT +
Sbjct: 592 WCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSS 639
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++ WG GQLG + + G LP V A +A G HTCALT G +
Sbjct: 642 VWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVTA--------IAAGDEHTCALTGSGGV 693
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
+ WG GQLG G T R+ P V +P+GV +A G HT
Sbjct: 694 WCWGDNYYGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGVYHTCALTG 740
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G + WG N GQ + + Y +PVD
Sbjct: 741 SGGVMCWGNNGDGQLGDGRPLY--RTTPVD 768
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y+WG G G+LGH GD +P + AL G+ IK ++CG H A+T + +
Sbjct: 122 DVYSWGWGDFGRLGH-----GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 176
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q G+LGLG T S +P + F I I ++VA G H++ DG
Sbjct: 177 SWGRNQNGELGLG--TTKDSHVPQKI-LAFEGIRI-------KMVAAGAEHSVAITEDGD 226
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
++GWG+ YG + P V+ ++ ++ G H+ ++ + L
Sbjct: 227 LYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 278
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG G+LG L + +P++++A +GI IK VA G H+ A+T G L
Sbjct: 171 MENKVLSWGRNQNGELG---LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 227
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 118
Y WG + G LGLG DT R IP V +G + +V+CG HT+
Sbjct: 228 YGWGWGRYGNLGLG-------------DTNDRLIPEKVNIDGDKIVMVSCGWRHTISISS 274
Query: 119 DGKIHGWGYNSYGQ 132
G ++ G++ YGQ
Sbjct: 275 SGGLYTHGWSKYGQ 288
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+ +WG G GQLGH D LLP ++ A DG I V CG +T A + G +Y+W
Sbjct: 70 VCSWGRGEDGQLGHGDT---DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 126
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F P + R ++ ++CG H L + K+
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGLR----------IKQISCGDCHCLAVTMENKVL 176
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG N G+ + + P + G ++ +AAG HS +T+
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + L+P +V +DG I V+CG HT +++S G LY
Sbjct: 226 DLYGWGWGRYGNLG---LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 281
Query: 64 GGCQAGQLGLG 74
G + GQLG G
Sbjct: 282 GWSKYGQLGHG 292
>gi|332018112|gb|EGI58726.1| RCC1 domain-containing protein 1 [Acromyrmex echinatior]
Length = 345
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G+G GQLGH L++ D P+ + AL G+ + ++ GG HT +T +G LY W
Sbjct: 179 DVYSMGMGIRGQLGHNELENCDN---PKLIEALAGLKVVQISAGGWHTAVVTDQGDLYTW 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG+ + + +P D F+N + V+ V CG+S T+ DG
Sbjct: 236 GWNSNGELGIENKDKKVYAVPTLID--FKNDRGENIEINVKKVECGNSFTICLTDDGFFW 293
Query: 124 GWGYNSYGQ 132
G G N YGQ
Sbjct: 294 GCGTNKYGQ 302
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 31/153 (20%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P+RV +D + CG HT L G +Y+ G GQLG NE +
Sbjct: 155 IPKRVKFVD------LTCGFDHTILLAENGDVYSMGMGIRGQLG-----------HNELE 197
Query: 89 TYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANE---KSTYAWY 143
N ++ G+++V + G HT V G ++ WG+NS G+ E K YA
Sbjct: 198 N-CDNPKLIEALAGLKVVQISAGGWHTAVVTDQGDLYTWGWNSNGELGIENKDKKVYA-V 255
Query: 144 PSPVDWC--VGE-----VRKLAAGGGHSAVLTD 169
P+ +D+ GE V+K+ G + LTD
Sbjct: 256 PTLIDFKNDRGENIEINVKKVECGNSFTICLTD 288
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDG------IFIKDVACGGVHTCALT 55
D+YTWG S G+LG +++ DK++ +P + + I +K V CG T LT
Sbjct: 231 DLYTWGWNSNGELG---IENKDKKVYAVPTLIDFKNDRGENIEINVKKVECGNSFTICLT 287
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYF 91
G + G + GQLG + + + D YF
Sbjct: 288 DDGFFWGCGTNKYGQLGKLQRNLENPYNFVKLDIYF 323
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + +PRRV + L ++ACG + + A+ G +Y
Sbjct: 342 EVYAWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYV 398
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ V CG++HTLV +G++
Sbjct: 399 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVTCGYAHTLVLTDEGQL 448
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP PV V + R + HSA
Sbjct: 449 YAWGANSYGQLGTGNKSNQSYPIPVP--VEKDRIIEIAACHSA 489
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ V CG HT LT +G LYAW
Sbjct: 395 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAW 451
Query: 64 GGCQAGQLGLGPQT-RSFSF-IPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 120
G GQLG G ++ +S+ +P E D +++ AC +HT + G
Sbjct: 452 GANSYGQLGTGNKSNQSYPIPVPVEKDRI------------IEIAACHSAHTSAAKTQSG 499
Query: 121 KIHGWG 126
++ WG
Sbjct: 500 HVYMWG 505
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG +Q+ + PRR+ +L G I ++ G G H T++G +Y
Sbjct: 236 EVFVLGTNCSGCLGTGDVQN---TIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYT 292
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + IP T N V VACG H+LV DG++
Sbjct: 293 WGHNAYSQLGNG--TTNHGLIPCHVSTNLVN-------KKVVEVACGSHHSLVLTSDGEV 343
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
+ WGYN+ GQ + + P V C+
Sbjct: 344 YAWGYNNSGQVGSGSTANQPIPRRVTSCL 372
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL 60
+Y WG S GQLG +G+K + P V I+ AC HT A T G +
Sbjct: 447 QLYAWGANSYGQLG-----TGNKSNQSYPIPVPVEKDRIIEIAACHSAHTSAAKTQSGHV 501
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ + L P FS
Sbjct: 502 YMWGQCRGQSVTL-PHLTHFS 521
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 4 DIYTWGLG----SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
DIYTWG G + GQLG ++ + P ++ +G I V+CG HT ALTS+
Sbjct: 700 DIYTWGGGGQDYNKGQLGLGHVKDIEN---PEKLKFFEGKKIVKVSCGQFHTMALTSENE 756
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL----VVPNGVQLVACGHSHTLV 115
L+ WG + G+LG T + P F IL + N +Q + CG HTL+
Sbjct: 757 LFGWGAGEFGELG----TSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLL 812
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
+G I+ GY GQ S V W + + + K+AAG HS L+D
Sbjct: 813 LTNNGYIYSSGYGRQGQLGLRNSENQCEFQLV-WTLTKKKIIKIAAGWNHSLALSD 867
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 34/181 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G + G + P + L+ + V CG H+ A+T G +Y WG
Sbjct: 653 VYSWG-------GTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWG 705
Query: 65 G----CQAGQLGLGPQTRSFSFIPN-ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLGLG I N E +F I+ V+CG HT+ +
Sbjct: 706 GGGQDYNKGQLGLG----HVKDIENPEKLKFFEGKKIVK-------VSCGQFHTMALTSE 754
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDW-----------CVGEVRKLAAGGGHSAVLT 168
++ GWG +G+ K Y V++ ++ + GG H+ +LT
Sbjct: 755 NELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLT 814
Query: 169 D 169
+
Sbjct: 815 N 815
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 28/172 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG G+L + Q P LD I+IK ++ H+ +++ G LY G
Sbjct: 545 IFAWGKNESGELSFGN-QKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCG 603
Query: 65 GCQAGQLGLGPQTRS----FSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G+LGL T + F IP F+ I +L VACG HTL
Sbjct: 604 SALHGKLGLEELTMANINKFQMIP-----IFKGIKVL-------QVACGDYHTLALTDTD 651
Query: 121 KIHGWG---YNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+++ WG + GQ + + P+P+ + V ++ G HSA +T
Sbjct: 652 QVYSWGGTLHKKVGQRSGK-------PAPIQQLNKKGVIQVDCGDYHSAAIT 696
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
GI + VACG HT ALT +Y+WGG ++G RS P +
Sbjct: 631 GIKVLQVACGDYHTLALTDTDQVYSWGGTLHKKVG----QRSGKPAPIQQ---------- 676
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
+ GV V CG H+ ++G I+ WG
Sbjct: 677 LNKKGVIQVDCGDYHSAAITQNGDIYTWG 705
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+ G G GQLG L++ + + + V L I +A G H+ AL+ + ++A G
Sbjct: 819 IYSSGYGRQGQLG---LRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLALSDQNDIFACG 875
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG-HS 111
GQLGLG + ES T F ++ L N + A G HS
Sbjct: 876 HGARGQLGLGDE---------ESRTIFTHVVSLGGKNTATISAGGDHS 914
>gi|242019440|ref|XP_002430169.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515260|gb|EEB17431.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 364
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGALYAW 63
++T G G GQLG C S ++ + ++GI +DV+CG H A T+ G Y+W
Sbjct: 161 VFTSGYGRKGQLGLCFNNSIPVKI--DKFTKVEGIDNCQDVSCGECHCIAQTTNGEFYSW 218
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG P +F P + +N P+ QL + G +H + +G +
Sbjct: 219 GNNKYGQLGFDPSIVTFLSTPKKLFLKVKN------PSCSQLFS-GWAHNSILTDEGHLI 271
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG N GQ E+ AW PSP+ + +++++ G HS LT++
Sbjct: 272 TWGRNDLGQLGEEREN-AWVPSPLK-SLNRIKQISLGSHHSVALTES 316
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ ++ WG S GQLG L+ P + + + + IK G H+ + +KG ++
Sbjct: 107 NFNVLGWGSNSFGQLG-LPLEKIKYISTPTVIFSNEALQIK---AGLRHSVIIDTKGIVF 162
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G + GQLGL IP + D + + I + Q V+CG H + +G+
Sbjct: 163 TSGYGRKGQLGLCFNNS----IPVKIDKFTKVEGI----DNCQDVSCGECHCIAQTTNGE 214
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG----EVRKLAAGGGHSAVLTD 169
+ WG N YGQ + S + +P + +L +G H+++LTD
Sbjct: 215 FYSWGNNKYGQLGFDPSIVTFLSTPKKLFLKVKNPSCSQLFSGWAHNSILTD 266
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G S GQLG SL D+ L+P + + K + GG HT +TS ++ G
Sbjct: 12 GSNSHGQLGQGSLI--DQLLVPTEIDF--SVEAKCITGGGKHTVLITSTNDVFICGDNDK 67
Query: 69 GQLGLGPQTRSFS-FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG T + F P S V VACG L + + GWG
Sbjct: 68 GQLGRKLSTIALHVFQPINSSIK------------VLKVACGWDFNLALTENFNVLGWGS 115
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
NS+GQ + +P E ++ AG HS ++
Sbjct: 116 NSFGQLGLPLEKIKYISTPTVIFSNEALQIKAGLRHSVII 155
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG +GQLG + + +P + +L+ I K ++ G H+ ALT G ++ WG
Sbjct: 270 LITWGRNDLGQLG----EERENAWVPSPLKSLNRI--KQISLGSHHSVALTESGTVFTWG 323
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ G G N+S +L + V+LV G +H+ +
Sbjct: 324 WNEHGNCG------------NDSSEDLLTPHMLKKISNVKLVGSGAAHSFL 362
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L D +P +V +++G + VACG H+ +++S GALY +
Sbjct: 198 DLYGWGWGRYGNLG---LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P + + +++PI ++ G HT+ DGK++
Sbjct: 255 GWSKYGQLGHG--DFQDHLVPRKLEA-LKDVPI-------SQISGGWRHTMAVAEDGKLY 304
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
GWG+N +GQ E + P V++ ++ ++A G H+ LT+
Sbjct: 305 GWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y+WG G G+LGH + P+ +VAL G+ IK +ACG H +T G +++
Sbjct: 93 MQLYSWGWGDFGRLGHGN---SSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHS 149
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F + V+++A G HT G +
Sbjct: 150 WGRNQNGQLGLG--NNQDSLLPQKIKA-FEGVC-------VKMIAAGAEHTTAITEGGDL 199
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
+GWG+ YG P V GE L A G HS ++ + +L
Sbjct: 200 YGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGAL 251
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + LLP+++ A +G+ +K +A G HT A+T G LY WG
Sbjct: 147 VHSWGRNQNGQLG---LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWG 203
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ G LGL SD R++P V + LVACG H++ G
Sbjct: 204 WGRYGNLGL-------------SDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 122 IHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 251 LYTYGWSKYGQ 261
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E +P + + D + V CG HT A + + LY
Sbjct: 42 VCSWGRGEDGQLGH-----GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLY 96
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G N SD + + + ++ +ACG SH L +G+
Sbjct: 97 SWGWGDFGRLGHG----------NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQ 146
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+H WG N GQ + + P + G V+ +AAG H+ +T+ L
Sbjct: 147 VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDL 199
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH Q L+PR++ AL + I ++ G HT A+ G LY WG
Sbjct: 251 LYTYGWSKYGQLGHGDFQD---HLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWG 307
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G+ S + + F + +V VACG HTL + I
Sbjct: 308 WNKFGQVGVEDNVDHCSPV----EVNFPDEQKIV------QVACGWRHTLALTENKNIFS 357
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 358 WGRGASGQ 365
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----V 99
++ G H+ AL S + +WG + GQLG G D+ R +P ++ V
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHG-------------DSEDRPVPTVLTSFDV 72
Query: 100 PNGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
P V V CG HT+ Y D +++ WG+ +G+ + S+ + P P+ G +++++
Sbjct: 73 PR-VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQI 131
Query: 158 AAGGGHSAVLT 168
A G H +T
Sbjct: 132 ACGDSHCLTVT 142
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P V D I VACG HT ALT
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCS---------PVEVNFPDEQKIVQVACGWRHTLALTENK 353
Query: 59 ALYAWGGCQAGQLGLG 74
+++WG +GQLG G
Sbjct: 354 NIFSWGRGASGQLGHG 369
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG + + + P V G I +A G H+ A+TS G + AWG
Sbjct: 115 MLAWGFNTWGQLGDGTTTNRNT---PVAVDLPTGTTITAIAAGKSHSLAVTSAGTMLAWG 171
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
AGQLG G T RN P+ V +P G + +A G+ H+L G
Sbjct: 172 LNSAGQLGDGTTTN-------------RNTPVAVDLPTGTTITAIAAGNGHSLALTSAGT 218
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ WG N++GQ + +T P VD G + LA GGGHS +T ++
Sbjct: 219 MLAWGENTWGQLGDGTTTNRNTPVTVDLPTGTTITALAGGGGHSLAVTSTGTM 271
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYAWGGC 66
WG ++GQLG + + + P V I +A G H+ A+TS + AWG
Sbjct: 65 WGFNALGQLGDGTTTNRNT---PVTVDLPADTTITAIAAGVNGHSLAVTSASTMLAWGFN 121
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIH 123
GQLG G T RN P+ V +P G + +A G SH+L G +
Sbjct: 122 TWGQLGDGTTTN-------------RNTPVAVDLPTGTTITAIAAGKSHSLAVTSAGTML 168
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG NS GQ + +T P VD G + +AAG GHS LT A ++
Sbjct: 169 AWGLNSAGQLGDGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLALTSAGTM 219
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL S GQLG + + + P V G I +A G H+ ALTS G + AWG
Sbjct: 167 MLAWGLNSAGQLGDGTTTNRNT---PVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWG 223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLVYMRDGK 121
GQLG G T RN P+ V +P G + A G H+L G
Sbjct: 224 ENTWGQLGDGTTTN-------------RNTPVTVDLPTGTTITALAGGGGHSLAVTSTGT 270
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG+N +GQ + +T P VD
Sbjct: 271 MLAWGFNFWGQLGDGTTTNRNTPVAVD 297
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG + + + P V G I +A GG H+ A+TS G + AWG
Sbjct: 219 MLAWGENTWGQLGDGTTTNRNT---PVTVDLPTGTTITALAGGGGHSLAVTSTGTMLAWG 275
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHS---HTLVYMRDG 120
GQLG G T RN P+ V +P G + A H+L G
Sbjct: 276 FNFWGQLGDGTTTN-------------RNTPVAVDLPTGTTITAIAGGGGGHSLAATSTG 322
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTDACSL 173
+ WG NS+GQ + ++ P VD G + +AAGG GHS T ++
Sbjct: 323 TMLAWGLNSFGQLGDGTTSNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTM 378
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVAC 108
H+ A TS G + AWG GQLG + T R+ P+ V +P G + A
Sbjct: 314 HSLAATSTGTMLAWGLNSFGQLG-------------DGTTSNRSTPVTVDLPAGTTITAI 360
Query: 109 ----GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 163
G H+L G + WG N+ GQ + ++ P VD G + + AGG H
Sbjct: 361 AAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTVDLPAGTTITAVTAGGFH 420
Query: 164 SAVLTDACSLKEL 176
S + + S L
Sbjct: 421 SLAIVPSTSTTTL 433
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV--HTCALTSKGALYA 62
+ WGL S GQLG + P V G I +A GG H+ A TS G + A
Sbjct: 324 MLAWGLNSFGQLGDGTTS---NRSTPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTMLA 380
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYM 117
WG GQLG + T R+ P+ V +P G + V G H+L +
Sbjct: 381 WGANTLGQLG-------------DGTTSNRSTPVTVDLPAGTTITAVTAGGFHSLAIV 425
>gi|47682199|gb|AAH69844.1| Rccd1 protein [Mus musculus]
Length = 377
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 32/186 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLGH +L++ EL PR + AL G+ + VA GG H+ L+ G +Y W
Sbjct: 181 QVFSWGAGRHGQLGHGTLEA---ELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYF-----------------------RNIPILV-V 99
G ++GQL L ++ + E T + P L+ +
Sbjct: 238 GWNESGQLALPTRSGTEKKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDL 297
Query: 100 PNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EV 154
P G V +CG HT V R G+++ WG+ YGQ ++ ST P V++ V EV
Sbjct: 298 PLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEV 357
Query: 155 RKLAAG 160
R + G
Sbjct: 358 RAVTCG 363
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ ++ + G H L + G +++WG + GQLG G T P +L
Sbjct: 161 LRVRQLELGAEHVLLLCTAGQVFSWGAGRHGQLGHG--TLEAELEPR----------LLE 208
Query: 99 VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
G+++ VA G H++ G I+ WG+N GQ A
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA 246
>gi|397609435|gb|EJK60365.1| hypothetical protein THAOC_19295 [Thalassiosira oceanica]
Length = 1106
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG+GS+G+LGH ++L P V L G+ I DV G H A++S G LY W
Sbjct: 525 LYTWGVGSLGRLGH----EKSRDLNYPTLVDQLKGVQIADVGGGLSHCAAVSSAGHLYTW 580
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG G + E + +F IP LV P V+CG+SHT ++G++
Sbjct: 581 GTGTRGQLGFGQ-------LGAEEEEFFCPIPTKLVFPTRALRVSCGNSHTACIGQEGQL 633
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKE 175
+ WG G+ + + P VD E V ++ G + VLT S+ E
Sbjct: 634 YVWGDPDGGRLGLGEDVDNVQYSPVLVDSLAKERVVDVSCGCHQTLVLTATTSVGE 689
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L D +P +V +++G + VACG H+ +++S GALY +
Sbjct: 198 DLYGWGWGRYGNLG---LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P + + +++PI ++ G HT+ DGK++
Sbjct: 255 GWSKYGQLGHG--DFQDHLVPRKLEA-LKDVPI-------SQISGGWRHTMAVAEDGKLY 304
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
GWG+N +GQ E + P V++ ++ ++A G H+ LT+
Sbjct: 305 GWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y+WG G G+LGH + S D P+ +VAL G+ IK +ACG H +T G +++
Sbjct: 93 MQLYSWGWGDFGRLGHGN--SSDV-FNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHS 149
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F + V+++A G HT G +
Sbjct: 150 WGRNQNGQLGLG--NNQDSLLPQKIKA-FEGVC-------VKMIAAGAEHTTAITEGGDL 199
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACSL 173
+GWG+ YG P V GE L A G HS ++ + +L
Sbjct: 200 YGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGAL 251
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + LLP+++ A +G+ +K +A G HT A+T G LY WG
Sbjct: 147 VHSWGRNQNGQLG---LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWG 203
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ G LGL SD R++P V + LVACG H++ G
Sbjct: 204 WGRYGNLGL-------------SDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 122 IHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 251 LYTYGWSKYGQ 261
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E +P + + D + V CG HT A + + LY
Sbjct: 42 VCSWGRGEDGQLGH-----GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLY 96
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDG 120
+WG G+LG G N SD F PI+ + ++ +ACG SH L +G
Sbjct: 97 SWGWGDFGRLGHG----------NSSDV-FNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
++H WG N GQ + + P + G V+ +AAG H+ +T+ L
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDL 199
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH Q L+PR++ AL + I ++ G HT A+ G LY WG
Sbjct: 251 LYTYGWSKYGQLGHGDFQD---HLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWG 307
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G+ S + + F + +V VACG HTL + I
Sbjct: 308 WNKFGQVGVEDNVDHCSPV----EVNFPDEQKIV------QVACGWRHTLALTENKNIFS 357
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 358 WGRGASGQ 365
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----V 99
++ G H+ AL S + +WG + GQLG G D+ R +P ++ V
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHG-------------DSEDRPVPTVLTSFDV 72
Query: 100 PNGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
P V V CG HT+ Y D +++ WG+ +G+ + S+ + P P+ G +++++
Sbjct: 73 PR-VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQI 131
Query: 158 AAGGGHSAVLT 168
A G H +T
Sbjct: 132 ACGDSHCLTVT 142
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P V D I VACG HT ALT
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCS---------PVEVNFPDEQKIVQVACGWRHTLALTENK 353
Query: 59 ALYAWGGCQAGQLGLG 74
+++WG +GQLG G
Sbjct: 354 NIFSWGRGASGQLGHG 369
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 29/174 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G G+LGH GD + +PR V L ++ V CG HT A+T G LY
Sbjct: 55 VYTWGRGDDGRLGH-----GDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYT 109
Query: 63 WGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WGG G+LG G + + S + + Y R VACG HT+V + +
Sbjct: 110 WGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQ------------VACGSRHTVVLLENQ 157
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVLTD 169
++ WG G + + ++ Y SP +CV E +++++A G H+A L++
Sbjct: 158 DVYTWGDKENGVSGHGDTSGHQY-SP--YCVSELVEINIKQISACGFHTAALSE 208
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G G G+LGH S ++ + + + + AL G IK VACGG HT A+T G ++ WG
Sbjct: 212 VFTFGEGKFGRLGHNSERN---QPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWG 268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G + GQLG G + IP ++ L+ N +QL CG SHT+ G++
Sbjct: 269 GGEHGQLGHGDKVN--QIIPTRVES-------LIDKNIIQL-TCGWSHTVALTDKGEVFT 318
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTD 169
WG +G+ + + P ++ + V +A+ H+ L +
Sbjct: 319 WGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +YTWG G GQLG L + P V AL ++CG HT LT G +Y
Sbjct: 1 MTVYTWGRGEDGQLG---LGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYT 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G + F+P + + V+ V CG HT G++
Sbjct: 58 WGRGDDGRLGHGDN--GWKFVPRLVED--------LRDKKVRQVTCGSYHTAAVTVSGEL 107
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG YG+ + PS V+ G VR++A G H+ VL +
Sbjct: 108 YTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLE 155
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LGH + ++G P V ++ G++++ VACG HT L +Y W
Sbjct: 106 ELYTWGGGMYGKLGHGN-ENGHST--PSLVESIKGLYVRQVACGSRHTVVLLENQDVYTW 162
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G G G T + P + LV N Q+ ACG HT +G++
Sbjct: 163 GDKENGVSGHG-DTSGHQYSP-------YCVSELVEINIKQISACGF-HTAALSENGQVF 213
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G +G+ + +D +G+ ++++A GG H+A +T++
Sbjct: 214 TFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTES 261
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G GH + + P V L I IK ++ G HT AL+ G ++ +
Sbjct: 158 DVYTWGDKENGVSGHGD--TSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTF 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-----LVVPNGVQLVACGHSHTLVYMR 118
G + G+LG + RN P+ ++ ++ VACG HT
Sbjct: 216 GEGKFGRLGHNSE---------------RNQPVAKCIDALIGKRIKQVACGGFHTAAVTE 260
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G + WG +GQ + P+ V+ + + + +L G H+ LTD
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTD 312
>gi|383319155|ref|YP_005379996.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320525|gb|AFC99477.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 429
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + P +V L+G+ +V+ GGVH+ AL G ++AWG
Sbjct: 102 VWAWGFNEEGQLGDGTY---NNSATPVKVKGLEGVV--EVSAGGVHSLALDKNGTVWAWG 156
Query: 65 GCQAGQLGLGPQTRSFS----FIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRD 119
GQLG G + S S P S+ F N+PI V GV+ VA G+ + V D
Sbjct: 157 ADWDGQLGNGIKVPSTSHGRVMPPGMSERDFHSNVPIRVNVTGVKQVAAGNDFSAVLKED 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA--------- 170
G + WG E YP +D C+ ++ +AAG A+ D
Sbjct: 217 GTVWAWG---------EGLKMPPYPERID-CLSNIKMIAAGYSLLALADDGTLWEYWVEW 266
Query: 171 CSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 209
S L E RL L+N I S GS ++A L
Sbjct: 267 TSWDSLPEVRLTRVEGLANVVSI----SSGGSHSMALLA 301
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 29 LPR-RVVALDGIF-IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
LP R+ ++G+ + ++ GG H+ AL + G ++AWG + G+LG G
Sbjct: 272 LPEVRLTRVEGLANVVSISSGGSHSMALLANGTVWAWGYNEDGELGDG-----------S 320
Query: 87 SDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ Y R+ P V + N + ++ G +++ DG + WG N GQ
Sbjct: 321 TSAYTRSTPARVQGLAN-ITSISAGWRNSIAVQDDGTVWAWGRNLEGQ 367
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 43/188 (22%)
Query: 5 IYTWGLGSVG--QLGHCSLQSGDKELLPRRVVALDGIFI--KDVACGGVHTCALTSKGAL 60
++ WG G + + D E + RV LD + + + AC AL G +
Sbjct: 48 VWAWGAPYPGAANFSYYGVGEKDDESILIRVDGLDNVTMVSTETAC-----FALDKNGTV 102
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 119
+AWG + GQLG G S + P+ V GV V+ G H+L ++
Sbjct: 103 WAWGFNEEGQLGDGTYNNSAT-------------PVKVKGLEGVVEVSAGGVHSLALDKN 149
Query: 120 GKIHGWGYNSYGQAAN------------------EKSTYAWYPSPVDWCVGEVRKLAAGG 161
G + WG + GQ N E+ ++ P V+ V V+++AAG
Sbjct: 150 GTVWAWGADWDGQLGNGIKVPSTSHGRVMPPGMSERDFHSNVPIRVN--VTGVKQVAAGN 207
Query: 162 GHSAVLTD 169
SAVL +
Sbjct: 208 DFSAVLKE 215
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG +LG+ S G L+P AL+ F+ D+ACGG H+ ALT+KG +YAW
Sbjct: 101 VYSWGYNDYCELGNRSTNEGLTPTLIPS---ALNNEFVVDIACGGHHSLALTNKGEVYAW 157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G +GQ+G G + IP + +V NG ++V +CG S ++ +G+
Sbjct: 158 GHNVSGQVGCGTILSTVQPIPK---------LLHIVLNGKKVVHISCGDSSSVAVTDNGE 208
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
++ WG+N GQ T P V + + K+ G H+ L+D
Sbjct: 209 VYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSD 257
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG GQ+G C + +P+ + + L+G + ++CG + A+T G +Y+
Sbjct: 153 EVYAWGHNVSGQVG-CGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYS 211
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG+G T P + T+ + + ++ V CG+ HTL +G +
Sbjct: 212 WGHNGVGQLGIGNCTSQAE--PQKVATFAKIV--------IEKVVCGYMHTLALSDEGDL 261
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG NSYGQ + W P+ +
Sbjct: 262 YVWGANSYGQLGLNTDSNVWIPTKLQ 287
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 31/139 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGALY 61
+Y G + G LG +GD + P+++ AL G +K A G G H ALT +G +Y
Sbjct: 48 VYGIGNNTYGCLG-----TGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVY 102
Query: 62 AWG-------GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
+WG G ++ GL P + IP+ + F V +ACG H+L
Sbjct: 103 SWGYNDYCELGNRSTNEGLTP-----TLIPSALNNEF-----------VVDIACGGHHSL 146
Query: 115 VYMRDGKIHGWGYNSYGQA 133
G+++ WG+N GQ
Sbjct: 147 ALTNKGEVYAWGHNVSGQV 165
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 36 LDGIFIKDVACGGVH------TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
L+ FI +V V+ T +T +Y G G LG G S
Sbjct: 18 LEPKFISNVRMAIVYGKAANETLIVTKDDMVYGIGNNTYGCLGTGD---------THSTI 68
Query: 90 YFRNIPILVVPNGVQLVACGH-SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
Y + I L V+ A G H L +GK++ WGYN Y + N + P+ +
Sbjct: 69 YPKKIEALC-GKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIP 127
Query: 149 WCVGE--VRKLAAGGGHSAVLTD 169
+ V +A GG HS LT+
Sbjct: 128 SALNNEFVVDIACGGHHSLALTN 150
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G G+LGH GD + +PR V AL+G I CG HT A+T KG LY
Sbjct: 61 VYTWGRGDDGRLGH-----GDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYT 115
Query: 63 WGGCQAGQLGLGPQTRSFS--FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WGG G+LG G ++ + + + D R V +ACG HT+V G
Sbjct: 116 WGGGMYGKLGHGNESGHPTPCMVKHLRDEGAR----------VTQIACGSRHTVVLTDLG 165
Query: 121 KIHGWGYNSYGQAANEKST-YAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
K++ WG G + + + + P ++ + V ++AA G H+A LT A
Sbjct: 166 KVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAA 217
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LGH + +SG + + +G + +ACG HT LT G +Y W
Sbjct: 112 ELYTWGGGMYGKLGHGN-ESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTW 170
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G +G ++P R + L Q+ ACG HT G+I
Sbjct: 171 GDKENGVVG-HTNADGHQYLP-------RMLESLQAKTVTQVAACGF-HTAALTAAGEIF 221
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
WG +G+ + P V+ +G+ V +A GG HSA + D+ L
Sbjct: 222 TWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGEL 272
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQLG D+ +L V AL + VACG HT L+ GA+Y WG
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDRPVL---VDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G + ++P R + L VQ CG HT G+++
Sbjct: 66 RGDDGRLGHGDN--GWKYVP-------RIVEALEGQRIVQ-ATCGSYHTAAVTDKGELYT 115
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTD 169
WG YG+ + + P V E V ++A G H+ VLTD
Sbjct: 116 WGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTD 163
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I+TWG G G+LGH ++ +++PR V AL G + VACGG H+ A+ G LY W
Sbjct: 219 EIFTWGEGKFGRLGHGMERN---QMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTW 275
Query: 64 GGCQAGQL 71
GG + GQ+
Sbjct: 276 GGGEHGQV 283
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +GH + + + LPR + +L + VA G HT ALT+ G ++ WG
Sbjct: 167 VYTWGDKENGVVGHTN--ADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG 224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G + +P R + L+ V VACG H+ + G+++
Sbjct: 225 EGKFGRLGHGMERN--QMVP-------RMVEALMGKR-VGHVACGGFHSAAILDSGELYT 274
Query: 125 WGYNSYGQ 132
WG +GQ
Sbjct: 275 WGGGEHGQ 282
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTL 114
G +Y+WG + GQLGLG DT ++ P+LV GV VACG HT+
Sbjct: 7 GLVYSWGRGEDGQLGLG-------------DTNDQDRPVLVDALKSKGVVQVACGSGHTV 53
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
V DG ++ WG G+ + + + + P V+ G+ + + G H+A +TD L
Sbjct: 54 VLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T++G ++
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P + T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG GS G+LGH D ++ P+ V +LDG+ +K VACG TCALT G LYA
Sbjct: 325 EVFCWGEGSRGKLGH----KVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYA 380
Query: 63 WGGCQAGQLGLGPQTRSFS-FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G LG + RS S ++P + IL VACG HT + G+
Sbjct: 381 WGENKYGA-NLGCEERSRSQWLPRRISGPLTGVCILN-------VACGDWHTAIVSSSGQ 432
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ +G S+G + P V+ G V+ +A G H+A + D
Sbjct: 433 LFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVD 481
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G G+LGH L +K+LLP V L + V+CG + T ALT+ G +Y G
Sbjct: 496 LFTWGDGDKGRLGHADL---EKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMG 552
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG P + S + E + V+ ++ G H G ++
Sbjct: 553 SSVHGQLG-NPHAKDKSIVIVEGK---------LKEEFVKEISSGSYHVAALTSSGSLYT 602
Query: 125 WGYNSYGQ 132
WG + GQ
Sbjct: 603 WGKGTNGQ 610
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS------- 56
++T+G GS G LGH +L S + P+ V +L G+ +K VACG HT A+
Sbjct: 432 QLFTYGDGSFGVLGHGNLLSVSQ---PKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488
Query: 57 ----KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACG 109
G L+ WG G+LG +D + +P V V V+CG
Sbjct: 489 FNGVGGKLFTWGDGDKGRLG-------------HADLEKKLLPTCVAQLVELDFDQVSCG 535
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAAN----EKSTYAWYPSPVDWCVGE--VRKLAAGGGH 163
T+ GK++ G + +GQ N +KS V+ + E V+++++G H
Sbjct: 536 RMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVI-----VEGKLKEEFVKEISSGSYH 590
Query: 164 SAVLTDACSL 173
A LT + SL
Sbjct: 591 VAALTSSGSL 600
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHTCALTSKGALYA 62
+YT G GQLG+ + DK ++ +V L F+K+++ G H ALTS G+LY
Sbjct: 548 VYTMGSSVHGQLGNP--HAKDKSIV---IVEGKLKEEFVKEISSGSYHVAALTSSGSLYT 602
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 113
WG GQLGLG N D RN P LV VQ +ACG + T
Sbjct: 603 WGKGTNGQLGLG----------NVED---RNFPTLVEALRDMQVQSIACGSNLT 643
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 4 DIYTWG----LGSVG----QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT 55
D+ WG +G++G Q G+ + + D LLP+ + + + + +++ G H +T
Sbjct: 263 DVLIWGEGVEVGNIGCVDNQFGYHNTKQVDA-LLPKLLESTVMLDVTNISLGRKHAALIT 321
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHT 113
+G ++ WG G+LG ++ D + ++ +GV + VACG T
Sbjct: 322 KRGEVFCWGEGSRGKLG------------HKVDMDVSSPKMVESLDGVHVKSVACGEYQT 369
Query: 114 LVYMRDGKIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEV--RKLAAGGGHSAVLTD 169
G+++ WG N YG E+S W P + + V +A G H+A+++
Sbjct: 370 CALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSS 429
Query: 170 ACSL 173
+ L
Sbjct: 430 SGQL 433
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y+WG G G+LGH GD +P + AL G+ IK ++CG H A+T + +
Sbjct: 85 DVYSWGWGDFGRLGH-----GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 139
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q G+LGLG T S +P + F I I ++VA G H++ DG
Sbjct: 140 SWGRNQNGELGLG--TTKDSHVPQKI-LAFEGIRI-------KMVAAGAEHSVAITEDGD 189
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
++GWG+ YG + P V+ ++ ++ G H+ ++ + L
Sbjct: 190 LYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 241
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M + +WG G+LG L + +P++++A +GI IK VA G H+ A+T G L
Sbjct: 134 MENKVLSWGRNQNGELG---LGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 190
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 118
Y WG + G LGLG DT R IP V +G + +V+CG HT+
Sbjct: 191 YGWGWGRYGNLGLG-------------DTNDRLIPEKVNIDGDKIVMVSCGWRHTISISS 237
Query: 119 DGKIHGWGYNSYGQ 132
G ++ G++ YGQ
Sbjct: 238 SGGLYTHGWSKYGQ 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+ +WG G GQLGH D LLP ++ A DG I V CG +T A + G +Y+W
Sbjct: 33 VCSWGRGEDGQLGHGDT---DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 89
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F P + R ++ ++CG H L + K+
Sbjct: 90 GWGDFGRLGHGDPSDLFIPHPIRALQGLR----------IKQISCGDCHCLAVTMENKVL 139
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG N G+ + + P + G ++ +AAG HS +T+
Sbjct: 140 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 186
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + L+P +V +DG I V+CG HT +++S G LY
Sbjct: 189 DLYGWGWGRYGNLG---LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 244
Query: 64 GGCQAGQLGLG 74
G + GQLG G
Sbjct: 245 GWSKYGQLGHG 255
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNG 102
++ G HT AL + + +WG + GQLG G DT R +P L +G
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHG-------------DTDDRLLPTKLSAFDG 63
Query: 103 VQLVA--CGHSHTLVYMRDGK-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
+V+ CG +T+ + GK ++ WG+ +G+ + + + P P+ G +++++
Sbjct: 64 QDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS 123
Query: 159 AGGGHSAVLT 168
G H +T
Sbjct: 124 CGDCHCLAVT 133
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG VGQLG ++ + + P + L + +A G HT AL + G+++AWG
Sbjct: 350 VYAWGRNDVGQLGLGTITAPQES--PALIPGLSDVIA--LAAGDDHTLALKADGSVWAWG 405
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G P T N+P GV+ +A G +H++ + DG +
Sbjct: 406 DNPNGELGTG------DITPYSVPTAVSNLP------GVKAIAAGGNHSVALLADGTVRT 453
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WGYN++GQ N +T + P PV +V +AAG
Sbjct: 454 WGYNNHGQLGNGSNTNSNVPVPVTGLT-DVVGIAAG 488
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ T G GQLG S P R + GI V G H+ ALTS+G +YA
Sbjct: 293 VVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYA 352
Query: 63 WGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
WG GQLGLG PQ S + IP SD V +A G HTL
Sbjct: 353 WGRNDVGQLGLGTITAPQ-ESPALIPGLSD--------------VIALAAGDDHTLALKA 397
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WG N G+ T P+ V G V+ +AAGG HS L
Sbjct: 398 DGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPG-VKAIAAGGNHSVAL 445
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG + D P + ++ ++ G H ALT+ G + G
Sbjct: 242 VWSWGDNTYGQLGRATTSPSDST--PTQASLINDAV--SISLGEYHAIALTNDGRVVTLG 297
Query: 65 GCQAGQLGLGPQTRSFSFI-PNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGK 121
GQLG GP S + PN D ++P G++ VA G H+L +G
Sbjct: 298 RDDYGQLGDGPGDSSGTHTAPNLRDN--------ILPAGIKAVAVQAGRYHSLALTSEGT 349
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
++ WG N GQ T + + +V LAAG H+ L
Sbjct: 350 VYAWGRNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLAL 395
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG + GQLG+ S + + +P V L + +A G T A+ S G++ AWG
Sbjct: 451 VRTWGYNNHGQLGNGSNTNSN---VPVPVTGLTDVV--GIAAGYEFTLAVLSNGSVKAWG 505
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNG--VQLVACGHSHTLVYMRDG 120
+ QLG N + T + P+ V +P G V+ + G H L + DG
Sbjct: 506 HDDSFQLG------------NGATTGDQTTPVDVQGIPTGRSVRGLTAGIFHALALLDDG 553
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG N GQ + + PV +V AA
Sbjct: 554 SMVAWGSNVQGQLGDGTPNSSDTAKPVSITGVQVPPTAA 592
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG S E PR V L I +ACG H ALT+ G LY+WG
Sbjct: 153 LFSWGSNSEGQLGLNS--KNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWG 210
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG R P +T +PI +ACG H++ + G I G
Sbjct: 211 SNSEGQLGLGVDIRC-EMKPKLINT-LAGVPI-------AFIACGGYHSIAISKSGAIFG 261
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 262 WGKNTFGQ 269
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+ G GQLGH + G K L + ++ LD K ACG HT A+ G L++WG
Sbjct: 103 IYSCGNNDYGQLGH---EQGRKRL--QLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWG 157
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGK 121
GQLGL S + P +V G + +ACG H L +G+
Sbjct: 158 SNSEGQLGLN------------SKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGE 205
Query: 122 IHGWGYNSYGQ 132
++ WG NS GQ
Sbjct: 206 LYSWGSNSEGQ 216
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 4 DIYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++Y+WG S GQLG C E+ P+ + L G+ I +ACGG H+ A++ G
Sbjct: 205 ELYSWGSNSEGQLGLGVDIRC-------EMKPKLINTLAGVPIAFIACGGYHSIAISKSG 257
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLV 115
A++ WG GQLGL +DT RN+P + + N V ACG ++
Sbjct: 258 AIFGWGKNTFGQLGL-------------NDTQNRNLPYQLQTLRNAKVCYAACGEEFSVF 304
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
DG + G YGQ + + P V +G V +++ G H+ L +
Sbjct: 305 LTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS 360
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH S + E+LPR+V+ L G + ++CG HT AL S+G +YAW
Sbjct: 311 VFTCGAGMYGQLGH---GSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAW 367
Query: 64 GGCQAGQLGLGPQTRS 79
G AGQLG TRS
Sbjct: 368 GLGGAGQLG-NNSTRS 382
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
+L K ++ WG + G+LGLG +P E D F+ + +Q +ACG ++
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVD--FKK------ASEIQQIACGENY 93
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEK 137
T+V DGKI+ G N YGQ +E+
Sbjct: 94 TVVITHDGKIYSCGNNDYGQLGHEQ 118
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G+LG ++ + L+P V I+ +ACG +T +T G +Y+
Sbjct: 48 DMFCWGNTRHGELGLGGIED-EIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSC 106
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + I F+ ACG HT+ G++
Sbjct: 107 GNNDYGQLGHEQGRKRLQLILGLDAFVFKK------------AACGAYHTIAVNEWGQLF 154
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG NS GQ N K+ P V + ++A G H+ LT+
Sbjct: 155 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTN 202
>gi|196003320|ref|XP_002111527.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
gi|190585426|gb|EDV25494.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
Length = 346
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++++G GS GQLGH +L D E PR + AL G+ K V CGG H+ A++S G Y+W
Sbjct: 186 EVFSFGRGSRGQLGHDTL---DNEGNPRVIEALQGLQFKLVTCGGWHSFAISSSGDAYSW 242
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G Q+ QLG+ + NE + ++ + N VQ ++ G H+ GK+
Sbjct: 243 GWNQSYQLGIDSNLEA-----NEVGSCIATPTLIEIENENVQAISGGSKHSACITESGKV 297
Query: 123 HGWGYNSYGQ 132
+ WG+ YGQ
Sbjct: 298 YTWGWGKYGQ 307
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
+ ++CG +H A+T+ Q GQ+ + FS +P T
Sbjct: 127 RGISCGDLHQLAITTDE--------QVGQVDKSNSSWCFSLLPTLQTTR----------- 167
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-G 160
V LV+CG H L+ G++ +G S GQ ++ P ++ G KL G
Sbjct: 168 -VNLVSCGKEHALILSITGEVFSFGRGSRGQLGHDTLDNEGNPRVIEALQGLQFKLVTCG 226
Query: 161 GGHSAVLTDA 170
G HS ++ +
Sbjct: 227 GWHSFAISSS 236
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+YTWG G GQLGH D +P+ V AL V CG HT S+
Sbjct: 297 VYTWGWGKYGQLGH---NCYDSVKVPQLVTALSEKLASTVTCGFWHTIVSVSE 346
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + DKE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----DKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG+ P+ + P R +L +P + +ACG +H+ + + G
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYP------LRLTTLLGIP--LAAIACGGNHSFLISKSGA 218
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
+ GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G +YGQ + S+ P V +G + ++A G H+ L
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P ++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G QLG T+ IP D I +CG H+L G++
Sbjct: 65 GSNDHSQLGHDLPTKRPLLIPELQDYVIIQI------------SCGSRHSLALSDWGQVL 112
Query: 124 GWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ A +K P V V + V ++A G HS LT
Sbjct: 113 SWGDNDCGQLGHATDKEIMQ-LPKVVRQLVSKTVVQIACGNNHSLALT 159
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ S LY WG GQLGLG Q + S IP DT V+ VACG
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT------------AVEQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H HTL +GK++ G N + Q ++ T P D+ + ++ + G HS L
Sbjct: 49 HRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQDYVIIQI---SCGSRHSLAL 105
Query: 168 TD 169
+D
Sbjct: 106 SD 107
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG S E PR V L + +ACG H ALT+ G LY+WG
Sbjct: 132 LFSWGSNTEGQLGLNS--KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWG 189
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG T+ + P + + F IPI +ACG H++ + G + G
Sbjct: 190 SNSEGQLGLGTDTK-YEIKP-KFISAFIGIPI-------AFIACGGYHSIAISKSGAVFG 240
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 241 WGKNTFGQ 248
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+ G GQLGH + G K L + + LD K ACG HT A+ G L++W
Sbjct: 81 EIYSCGNNDYGQLGH---EKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDG 120
G GQLGL S + + P +V G +V ACG H +G
Sbjct: 136 GSNTEGQLGLN------------SKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNG 183
Query: 121 KIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+++ WG NS GQ + Y P + +G + +A GG HS ++ +
Sbjct: 184 ELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS 235
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 21/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG S GQLG L + K E+ P+ + A GI I +ACGG H+ A++ GA++
Sbjct: 184 ELYSWGSNSEGQLG---LGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFG 240
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRD 119
WG GQLGL +DT RN+P + + N + ACG ++ D
Sbjct: 241 WGKNTFGQLGL-------------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + G YGQ + ++ P V +G V +++ G H+ L +
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS 339
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G+LG ++ + L+PR + I+ +ACG +T +T G +Y+
Sbjct: 27 DMFCWGSTIHGELGLGGIED-ENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + IP F+ ACG HTL G++
Sbjct: 86 GNNDYGQLGHEKGRKRLQLIPGLDAFVFKK------------AACGAYHTLAINEWGQLF 133
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG N+ GQ N K+ P V V ++A G H+ LT+
Sbjct: 134 SWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH S E+LPR+V+ L G + ++CG HT AL S+G +YAW
Sbjct: 290 VFTCGAGMYGQLGHGS---NSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 346
Query: 64 GGCQAGQLGLGPQTRSFS 81
G AGQLG TRS +
Sbjct: 347 GLGGAGQLG-NHSTRSVT 363
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
L K ++ WG G+LGLG IP E D F+ +Q +ACG ++T
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELD--FKKAA------EIQQIACGENYT 73
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTD 169
+V + G+I+ G N YGQ +EK P +D V +K A G H+ + +
Sbjct: 74 VVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFV--FKKAACGAYHTLAINE 128
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
IYTWG G LG S + LP + L+ + + VACG HT ALT+ G +YA
Sbjct: 843 IYTWGQTVKGCLGQGPTMS--RHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYA 899
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGLG S Y R I L N + L +CG HTL G++
Sbjct: 900 WGCSKYGQLGLGDVYES---------PYPRLITSLANENVITL-SCGQFHTLALTEKGQV 949
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-LAAGGGHSAVLTD 169
WG+ +GQ P V+ +V K +AAG GHS VL+D
Sbjct: 950 FAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSD 997
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 27/175 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQLG L + PR + +L + ++CG HT ALT KG ++AWG
Sbjct: 897 VYAWGCSKYGQLG---LGDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWG 953
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
GQLGLG N D + +P+ V ++ +A GH H+LV G+
Sbjct: 954 WGVHGQLGLG----------NIDD---QRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQ 1000
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDW--------CVGEVRKLAAGGGHSAVLT 168
I +G +GQ +T + P + G ++ G HSA+LT
Sbjct: 1001 IFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLT 1055
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G GQLG L + D + LP V L IKD+A G H+ L+ KG ++++G
Sbjct: 949 VFAWGWGVHGQLG---LGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFG 1005
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T+S +P I IL+ ++CG H+ + G ++
Sbjct: 1006 SGVFGQLGTGNTTKSS--VPVLIQGISEKI-ILIATGYFHSISCGCHHSALLTVSGGVYT 1062
Query: 125 WGYNSYGQAAN 135
WG + GQ N
Sbjct: 1063 WGRSLDGQLGN 1073
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 16/133 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
I+++G G GQLG + +L +++ + + ++CG H+ LT G +
Sbjct: 1001 IFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGV 1060
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD- 119
Y WG GQLG G + +T+ ++CG T +
Sbjct: 1061 YTWGRSLDGQLGNGGHKEVTAPTQINENTF-----------KADCISCGCEFTAAQEKQT 1109
Query: 120 GKIHGWGYNSYGQ 132
GKI WG NS GQ
Sbjct: 1110 GKIFCWGSNSVGQ 1122
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 46 CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
CG HT AL G +Y WG G LG GP T S +P+ PI ++ N +L
Sbjct: 830 CGYGHT-ALIRNGTIYTWGQTVKGCLGQGP-TMSRHSLPS---------PISLL-NCFKL 877
Query: 106 ----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
VACG +HT +G ++ WG + YGQ + YP + E V L+ G
Sbjct: 878 EVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCG 936
Query: 161 GGHSAVLTD 169
H+ LT+
Sbjct: 937 QFHTLALTE 945
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + P + AL GI IK +ACG H A+T +G + +W
Sbjct: 79 EVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSW 135
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG S +P + F I I + VA G HT DG ++
Sbjct: 136 GRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KXVAAGAEHTAAVTEDGDLY 185
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
GWG+ YG T P V GE A G
Sbjct: 186 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACG 223
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 29 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSW 83
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 84 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTXEGEVQ 133
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 134 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDL 184
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G LY W
Sbjct: 131 EVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGW 187
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRDG 120
G + G LGLG +T R +P V G + VACG HT+ G
Sbjct: 188 GWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKXSXVACGWRHTISVSYSG 234
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 235 ALYTYGWSKYGQ 246
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 236 LYTYGWSKYGQLGHGDLED---HLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWG 292
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 293 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 339
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 340 VFAWGRGTNGQLGIGESVDRNFPKIIE 366
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 5 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 43
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 44 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPL 103
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 104 PIKALHGIRIKQIACGDSHCLAVT 127
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 83/170 (48%), Gaps = 24/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YT G S GQLGH DK + P V ALD I V+CG H+ A+ +G L+AW
Sbjct: 54 VYTCGSNSCGQLGH------DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAW 107
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G GQLGLG ++T R IP LV + + V CG+ H + RDG
Sbjct: 108 GAGDGGQLGLG-----------TTETTVR-IPRLVKRLCDHRISQVMCGNQHCVALSRDG 155
Query: 121 KIHGWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
++ WG N+ GQ K +P P+ G + ++ AGG HS L+
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALS 205
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG + GQLG L G+ +L P + +L GI + + GG H+ AL+ GA++ W
Sbjct: 157 LFTWGQNTSGQLG---LGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGW 213
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G +AGQLGL +D R +P + V ++CG HT +DG
Sbjct: 214 GKNRAGQLGL-------------NDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDG 260
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G S+GQ + + P V +G EV ++A G H+
Sbjct: 261 GLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHT 305
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S S ELLPRRV+ L G + +ACG HT A S G +YA+
Sbjct: 262 LFTFGDGSWGQLGHGSTNS---ELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAF 318
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 319 GCNSHGQLGTG 329
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG+G + ++ F P + G++ V CG H++ M DG +
Sbjct: 4 WGNAKDGQLGIGVE-KNPVFEPRNCHVF--------SGRGLKEVGCGGQHSVFLMHDGSV 54
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
+ G NS GQ ++K+ + P V ++ ++ G GHS + + L
Sbjct: 55 YTCGSNSCGQLGHDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQL 104
>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 14/175 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y++G+GS GQLGH + KE +P+ + A+ + + ++ GG H+ +++ G +Y WG
Sbjct: 191 VYSYGMGSRGQLGHGDI---GKEDVPKLLDAIACVPMVTISAGGWHSACISAIGDMYIWG 247
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTY-----FRNIP-ILVVPNGVQL--VACGHSHTLVY 116
++GQLGL P S S F+ +P +L +P GV + V+CG HT
Sbjct: 248 WNESGQLGLPPDLESSRTEEGSSHVMADRISFQMVPAVLDLPGGVNVSKVSCGSRHTAAV 307
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLT 168
D +++ WG+ YGQ + P VD+ + +V + G SAV T
Sbjct: 308 SYDKRLYTWGWGKYGQLGHGDVQSRDSPKLVDFFLQNRLDVLDVTCGDWSSAVYT 362
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 4 DIYTWGLGSVGQLG------HCSLQSGDKELLPRRV------VALD---GIFIKDVACGG 48
D+Y WG GQLG + G ++ R+ LD G+ + V+CG
Sbjct: 242 DMYIWGWNESGQLGLPPDLESSRTEEGSSHVMADRISFQMVPAVLDLPGGVNVSKVSCGS 301
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGP-QTRSFSFIPNESDTYFRN 93
HT A++ LY WG + GQLG G Q+R P D + +N
Sbjct: 302 RHTAAVSYDKRLYTWGWGKYGQLGHGDVQSRDS---PKLVDFFLQN 344
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKL 157
P GVQ +ACG H L+ G ++ +G S GQ + P +D CV V +
Sbjct: 169 PIGVQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDAIACVPMV-TI 227
Query: 158 AAGGGHSAVLT 168
+AGG HSA ++
Sbjct: 228 SAGGWHSACIS 238
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG C + + L P+ + L + I +ACG VH AL + G L++WG
Sbjct: 162 VFSWGCNRNGQLG-CGTEE-ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWG 219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLGLG + +P R + LV VP + LVACG H++ G +
Sbjct: 220 GNASGQLGLGRDSTGNERLP-------RRVSHLVGVP--LALVACGAMHSVGLTPSGTVF 270
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ +P+ + + ++ + G H+A LT
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALT 316
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG + GQLG +G+ E LPRRV L G+ + VACG +H+ LT G ++ W
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGN-ERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVW 272
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGL SD R P ++ P ++ V CG +HT DG
Sbjct: 273 GRNSCGQLGL-------------SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 319
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
+ +G +YGQ + P V +G + +L+ G H+
Sbjct: 320 GVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTV 365
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSG-DKEL---LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y+WGLG G+LG + G D E P RV +++VACG HT L + G++
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G GQLG R + S + ++ VACG +H+L G
Sbjct: 113 YSCGANDFGQLGQDRSMRKLEQVAALS------------AHEIRAVACGEAHSLALSDAG 160
Query: 121 KIHGWGYNSYGQ 132
++ WG N GQ
Sbjct: 161 QVFSWGCNRNGQ 172
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP-RRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+ G GQLG D+ + +V AL I+ VACG H+ AL+ G +++W
Sbjct: 112 VYSCGANDFGQLGQ------DRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + ES + I L + VQ +ACG H L +G++
Sbjct: 166 GCNRNGQLGCGTE--------EESRLRPKVIKKLATLHIVQ-IACGAVHCLALANNGELF 216
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDA 170
WG N+ GQ + + P V VG L A G HS LT +
Sbjct: 217 SWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPS 266
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG L L P + L IK V CG HT ALT+ G ++ +G
Sbjct: 269 VFVWGRNSCGQLG---LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 325
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM-RDG 120
GQLG G + NE+ +P VV + ++CG HT+ Y + G
Sbjct: 326 AGTYGQLGHGVKV-------NEA------VPRRVVELMGTAISQLSCGRCHTVAYAPQSG 372
Query: 121 KIHGWGYNSYGQAAN 135
+++ +G GQ N
Sbjct: 373 RLYIFGLGMSGQLGN 387
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
LY+WG G+LGL T+ + E+ V+ VACGH HTLV + +
Sbjct: 53 LYSWGLGPNGELGL---TQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLAN 109
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G ++ G N +GQ ++S E+R +A G HS L+DA
Sbjct: 110 GSVYSCGANDFGQLGQDRSMRKL-EQVAALSAHEIRAVACGEAHSLALSDA 159
>gi|57997475|emb|CAI46056.1| hypothetical protein [Homo sapiens]
Length = 900
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + WG
Sbjct: 27 VFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 84
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 85 SNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 136
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 137 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 177
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 34 VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN 93
+ L+ I I V+CG H+ AL+ +++WG GQLGLG + F S R+
Sbjct: 1 MTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKE-----FPSQASPQRVRS 55
Query: 94 IPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWC 150
+ G+ L VA G +H+ G GWG NS GQ A + ++ P+
Sbjct: 56 L------EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLS-- 107
Query: 151 VGEVRKL-----AAGGGHSAVLT 168
VG ++ L + G H+AVLT
Sbjct: 108 VGALKNLGVVYISCGDAHTAVLT 130
>gi|328783317|ref|XP_394080.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 345
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G+G+ GQLGH L+ D P+ V AL GI + ++ G H+ +T++G LY W
Sbjct: 181 DLYSMGMGTRGQLGHNDLEDCDN---PKLVEALAGIKVTQISAAGWHSAVVTNQGDLYTW 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGL Q +P D F N V V+ CG++ T+ DG
Sbjct: 238 GWNTNGELGLTDQESKVIAVPTLID--FTNDKNESVEIFVEKAQCGNTFTICMTNDGTFW 295
Query: 124 GWGYNSYGQ 132
G G N YGQ
Sbjct: 296 GCGCNKYGQ 304
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 93 NIPILV-VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
NIP L+ +P V+ + ACG HT++ +G ++ G + GQ + P V+
Sbjct: 150 NIPTLIDIPKRVRFIDIACGFDHTILLAENGDLYSMGMGTRGQLGHNDLEDCDNPKLVEA 209
Query: 150 CVG-EVRKLAAGGGHSAVLTDACSL 173
G +V +++A G HSAV+T+ L
Sbjct: 210 LAGIKVTQISAAGWHSAVVTNQGDL 234
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-------IFIKDVACGGVHTCALTS 56
D+YTWG + G+LG +S K + ++ IF++ CG T +T+
Sbjct: 233 DLYTWGWNTNGELGLTDQES--KVIAVPTLIDFTNDKNESVEIFVEKAQCGNTFTICMTN 290
Query: 57 KGALYAWGGCQAGQLGLGPQ--TRSFSFI 83
G + G + GQLG P+ S FI
Sbjct: 291 DGTFWGCGCNKYGQLGQSPEKLANSMKFI 319
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P+RV +D +ACG HT L G LY+ G GQLG +D
Sbjct: 157 IPKRVRFID------IACGFDHTILLAENGDLYSMGMGTRGQLG-------------HND 197
Query: 89 TYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ--AANEKSTYAWY 143
+ P LV G+++ ++ H+ V G ++ WG+N+ G+ +++S
Sbjct: 198 LEDCDNPKLVEALAGIKVTQISAAGWHSAVVTNQGDLYTWGWNTNGELGLTDQESKVIAV 257
Query: 144 PSPVDW 149
P+ +D+
Sbjct: 258 PTLIDF 263
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T++G ++
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 127
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P + T N ++ V ACG H+LV DG++
Sbjct: 128 WGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 282 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 337 YMWGQCR-GQSVILPHLTHFS 356
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG +LG+ ++ L P + L FI D+ACG H+ ALT+ G +YAWG
Sbjct: 98 VYSWGQNCHYELGN---TFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWG 154
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQ+G T IP R + + V ++CG S ++V +G+++
Sbjct: 155 QNTSGQVGCHDDTTLVQDIP-------RKLNFTLTGKKVICISCGDSFSVVVTNNGEVYS 207
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTD 169
WG N GQ E + ++P + V K+ G H+ L+D
Sbjct: 208 WGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSD 253
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG VGQLG +++ + + P ++ +L I I+ V CG +HT AL+ +G LY W
Sbjct: 204 EVYSWGCNDVGQLG---IENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSDEGVLYVW 260
Query: 64 GGCQAGQLGL 73
G GQLGL
Sbjct: 261 GDNNYGQLGL 270
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G C + + +PR++ L G + ++CG + +T+ G +Y+
Sbjct: 149 EVYAWGQNTSGQVG-CHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYS 207
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG I N +D + + ++ V CG HTL +G +
Sbjct: 208 WGCNDVGQLG----------IENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSDEGVL 257
Query: 123 HGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEVRKL 157
+ WG N+YGQ W P+ ++ V E+R++
Sbjct: 258 YVWGDNNYGQLGLTTVLLNIWKPTKLE--VPEMRRV 291
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T++G ++
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P + T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG C + + L P+ + L + I +ACG VH AL + G L++WG
Sbjct: 156 VFSWGCNRNGQLG-CGTEE-ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWG 213
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLGLG + +P R + LV VP + LVACG H++ G +
Sbjct: 214 GNASGQLGLGRDSTGNERLP-------RRVSHLVGVP--LALVACGAMHSVGLTPSGTVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ +P+ + + ++ + G H+A LT
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALT 310
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG + GQLG +G+ E LPRRV L G+ + VACG +H+ LT G ++ W
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGN-ERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVW 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGL SD R P ++ P ++ V CG +HT DG
Sbjct: 267 GRNSCGQLGL-------------SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 313
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
+ +G +YGQ + P V +G + +L+ G H+
Sbjct: 314 GVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTV 359
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSG-DKEL---LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y+WGLG G+LG + G D E P RV +++VACG HT L + G++
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G GQLG R + S + ++ VACG +H+L G
Sbjct: 107 YSCGANDFGQLGQDRSMRKLEQVAALS------------AHEIRAVACGEAHSLALSDAG 154
Query: 121 KIHGWGYNSYGQ 132
++ WG N GQ
Sbjct: 155 QVFSWGCNRNGQ 166
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP-RRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+ G GQLG D+ + +V AL I+ VACG H+ AL+ G +++W
Sbjct: 106 VYSCGANDFGQLGQ------DRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + ES + I L + VQ +ACG H L +G++
Sbjct: 160 GCNRNGQLGCGTE--------EESRLRPKVIKKLATLHIVQ-IACGAVHCLALANNGELF 210
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDA 170
WG N+ GQ + + P V VG L A G HS LT +
Sbjct: 211 SWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPS 260
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG L L P + L IK V CG HT ALT+ G ++ +G
Sbjct: 263 VFVWGRNSCGQLG---LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 319
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM-RDG 120
GQLG G + NE+ +P VV + ++CG HT+ Y + G
Sbjct: 320 AGTYGQLGHGVKV-------NEA------VPRRVVELMGTAISQLSCGRCHTVAYAPQSG 366
Query: 121 KIHGWGYNSYGQAAN 135
+++ +G GQ N
Sbjct: 367 RLYIFGLGMSGQLGN 381
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
LY+WG G+LGL T+ + E+ V+ VACGH HTLV + +
Sbjct: 47 LYSWGLGPNGELGL---TQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLAN 103
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G ++ G N +GQ ++S E+R +A G HS L+DA
Sbjct: 104 GSVYSCGANDFGQLGQDRSMRKL-EQVAALSAHEIRAVACGEAHSLALSDA 153
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ GQLG+ Q + P +V L G+ +A GG H AL + G ++ WG
Sbjct: 2464 VWAWGINDQGQLGNGG-QDLNPHKNPEQVPGLTGV--TALAPGGYHVVALKNDGTVWTWG 2520
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T FS P + +P L GV+ VA G +HT+V DG +
Sbjct: 2521 KNDSGQLGDGTYTSRFS--PGQ-------VPGLT---GVKAVAAGANHTVVLKTDGTVWA 2568
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGGHS 164
WG N YGQ S A SPV + V ++ AG H+
Sbjct: 2569 WGNNMYGQLGTSPSVLAKTYSPVQIPGIDSVVEIGAGIWHT 2609
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + S P +V L G+ K VA G HT L + G ++AWG
Sbjct: 2516 VWTWGKNDSGQLGDGTYTS---RFSPGQVPGLTGV--KAVAAGANHTVVLKTDGTVWAWG 2570
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG P + ++ P + IP + + V + G HTL DG +
Sbjct: 2571 NNMYGQLGTSPSVLAKTYSPVQ-------IPGI---DSVVEIGAGIWHTLARRADGTVWA 2620
Query: 125 WGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ N S P+ V G V K+AAGG H+ L
Sbjct: 2621 WGRNIEGQVGNGSASAVVDSPAQVSGLTG-VTKVAAGGYHNLAL 2663
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V G ++ AL G ++AWG GQLG G Q + P + +P L GV
Sbjct: 2448 VYSGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQ-------VPGL---TGV 2497
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
+A G H + DG + WG N GQ + T + P V G V+ +AAG H
Sbjct: 2498 TALAPGGYHVVALKNDGTVWTWGKNDSGQLGDGTYTSRFSPGQVPGLTG-VKAVAAGANH 2556
Query: 164 SAVL 167
+ VL
Sbjct: 2557 TVVL 2560
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQ+G+ S + P +V L G+ VA GG H AL S G ++AWG
Sbjct: 2618 VWAWGRNIEGQVGNGSASAVVDS--PAQVSGLTGV--TKVAAGGYHNLALRSDGTVWAWG 2673
Query: 65 GCQAGQLGLGPQTRS 79
GQLG G S
Sbjct: 2674 RNDKGQLGTGNTVSS 2688
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVP 100
D+A G H+ A+ AL WG GQLG G + + + +D N P+L
Sbjct: 1952 DIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWN-PVL--- 2007
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
++ G +HT V DG + WG N++GQ N A P
Sbjct: 2008 ---SGMSPGSTHTAVLGSDGSVWSWGNNAFGQLGNGSYATAGPP 2048
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + DKE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG+ PN D N P+ L G+ L +ACG +H+ + +
Sbjct: 167 WGSNIYGQLGVNS--------PN--DLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G + GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T RS+ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETNRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS 320
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P ++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIP--------------------------------------N 85
G QLG T+ IP +
Sbjct: 65 GSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 86 ESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA---ANEKST 139
+D +P +V V V +ACG++H+L G+++ WG N YGQ + T
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ YP + +G + +A GG HS +++ +
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ S LY WG GQLGLG Q + S IP DT VQ VACG
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT------------AVQQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H HTL GK++ G N Y Q ++ T P D+ + ++ G HS L
Sbjct: 49 HRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQI---CCGSRHSLAL 105
Query: 168 TD 169
+D
Sbjct: 106 SD 107
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + DKE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG+ PN D N P+ L G+ L +ACG +H+ + +
Sbjct: 167 WGSNIYGQLGVNS--------PN--DLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G + GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T RS+ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETNRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS 320
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P ++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIP--------------------------------------N 85
G QLG T+ IP +
Sbjct: 65 GSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 86 ESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA---ANEKST 139
+D +P +V V V +ACG++H+L G+++ WG N YGQ + T
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ YP + +G + +A GG HS +++ +
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ S LY WG GQLGLG Q + S IP DT VQ VACG
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT------------AVQQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H HTL GK++ G N Y Q ++ T P D+ + ++ G HS L
Sbjct: 49 HRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQI---CCGSRHSLAL 105
Query: 168 TD 169
+D
Sbjct: 106 SD 107
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + PR V AL + +ACG HT ALT+ G LYAWG
Sbjct: 132 LFCWGSNADGQLGLGTPLTIAHT--PRMVKALGTSIVVQIACGKKHTLALTNNGELYAWG 189
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLGLG D P L+ +P + +ACG H++V +
Sbjct: 190 SNSDGQLGLG------------QDVKIETRPKLITGLATIP--IAFIACGGYHSIVVSKS 235
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLT 168
G + GWG N++GQ + + P + +V+ +A G S LT
Sbjct: 236 GAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLT 285
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 22/133 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++ G GQLGH + K L + + LD K ACG H+ A+ + G L+ W
Sbjct: 81 EVFSCGNNDSGQLGH---EKPTKRL--QMIPGLDAFIFKQAACGASHSVAVNNWGQLFCW 135
Query: 64 GGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRD 119
G GQLGLG P T + + P +V G +V ACG HTL +
Sbjct: 136 GSNADGQLGLGTPLTIAHT-------------PRMVKALGTSIVVQIACGKKHTLALTNN 182
Query: 120 GKIHGWGYNSYGQ 132
G+++ WG NS GQ
Sbjct: 183 GELYAWGSNSDGQ 195
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG Q E P+ + L I I +ACGG H+ ++ GA++ W
Sbjct: 184 ELYAWGSNSDGQLGLG--QDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGW 241
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG+ + SD Y + + V+ VACG ++ DG +
Sbjct: 242 GRNTFGQLGMN----------DISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVF 291
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G YGQ + ++ P + +G V +++ G H+ L +
Sbjct: 292 TCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPS 339
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G+LG ++ + L+PR + ++ +ACG HT +T G +++
Sbjct: 27 NMYCWGSTVYGELGLGGIED-ENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSC 85
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLG T+ IP F+ ACG SH++ G++
Sbjct: 86 GNNDSGQLGHEKPTKRLQMIPGLDAFIFKQ------------AACGASHSVAVNNWGQLF 133
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG N+ GQ T A P V V ++A G H+ LT+
Sbjct: 134 CWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN 181
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH + E+LPR+++ L G + ++CG HT AL S+G +YAW
Sbjct: 290 VFTCGAGMYGQLGH---GANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Query: 64 GGC 66
G
Sbjct: 347 GLG 349
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 283 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 338 MWGQCR-GQSVILPHLTHFS 356
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + P+ + AL G+ I +ACG H A+T G +++
Sbjct: 101 LQLYSWGWGDFGRLGHGN---SSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 157
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F + V+++A G HT DG +
Sbjct: 158 WGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR-------VKMIAAGAEHTAAVTEDGDL 207
Query: 123 HGWGYNSYG 131
+GWG+ YG
Sbjct: 208 YGWGWGRYG 216
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + + LLP+++ A +G+ +K +A G HT A+T G LY WG
Sbjct: 155 VHSWGRNQNGQLG---LGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 211
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G LGLG R IP + + V + LVACG HT+ G I+
Sbjct: 212 WGRYGNLGLG--DRDDRLIPEKVSS--------VNGQKMVLVACGWRHTITVSSSGSIYT 261
Query: 125 WGYNSYGQ 132
+G++ YGQ
Sbjct: 262 YGWSKYGQ 269
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L D L+P +V +++G + VACG HT ++S G++Y +
Sbjct: 206 DLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 262
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + ++ G HT+ DGK++
Sbjct: 263 GWSKYGQLGHG--DFEDHLVPHKLEALKDTT--------ISQISGGWRHTMALAADGKLY 312
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GWG+N +GQ + P V++ + V ++A G H+ LT+A ++
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 363
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 21/132 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYT+G GQLGH + L+P ++ AL I ++ G HT AL + G LY WG
Sbjct: 259 IYTYGWSKYGQLGHGDFED---HLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWG 315
Query: 65 GCQAGQLGLGPQTRSFSFI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ GQ+G+G S + PNE V VACG HTL
Sbjct: 316 WNKFGQVGVGDNEDHCSPVQVNFPNEQK--------------VVQVACGWRHTLALTEAK 361
Query: 121 KIHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 362 NVFSWGRGTSGQ 373
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALD---GIFIKDVACGGVHTCALTSKG 58
+ +WG G GQLGH GD E P V A D G V CG HT A + +
Sbjct: 46 VCSWGRGEDGQLGH-----GDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEE 100
Query: 59 -ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
LY+WG G+LG G + F+ P ++ R + +ACG SH L
Sbjct: 101 LQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR----------ITQIACGDSHCLAVT 150
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G +H WG N GQ + + P + G V+ +AAG H+A +T+ L
Sbjct: 151 VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 207
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 32/160 (20%)
Query: 23 SGDKELLPR---RVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRS 79
+GD E +P R V L ++ G H+ AL S G + +WG + GQLG G
Sbjct: 13 AGDDEAVPEAPERSVVL-------ISAGASHSVALLSGGVVCSWGRGEDGQLGHG----- 60
Query: 80 FSFIPNESDTYFRNIPILVV------PNGV-QLVACGHSHTLVYMRDG-KIHGWGYNSYG 131
D R +P ++ P GV +V CG HT Y + +++ WG+ +G
Sbjct: 61 --------DAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFG 112
Query: 132 QAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ + S+ + P P+ G + ++A G H +T A
Sbjct: 113 RLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVA 152
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 28/100 (28%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V + + VACG HT ALT
Sbjct: 311 LYGWGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALTEAK 361
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+++WG +GQLG G + RNIP ++
Sbjct: 362 NVFSWGRGTSGQLGHG-------------EIVDRNIPKMI 388
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + DKE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 116 VLSWGDNDCGQLGHAT----DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 171
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG+ PN D N P+ L G+ L +ACG +H+ + +
Sbjct: 172 WGSNIYGQLGVNS--------PN--DLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 221
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G + GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 222 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTN 272
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 168 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 227
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T RS+ P + T R + GV+ VACG ++ +G +
Sbjct: 228 GRNNCGQLGLNDETNRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 276
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 277 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS 325
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 51/217 (23%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P ++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 64 GGCQAGQLG-----LGPQTRSFSFIP---------------------------------- 84
G QLG P+ F IP
Sbjct: 65 GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 124
Query: 85 ----NESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA---A 134
+ +D +P +V V V +ACG++H+L G+++ WG N YGQ +
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 184
Query: 135 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
T+ YP + +G + +A GG HS +++ +
Sbjct: 185 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 221
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 276 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 332
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 333 GLGSSGQLG 341
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ S LY WG GQLGLG Q + S IP DT VQ VACG
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT------------AVQQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANE-------KSTYAWYPSPVDWCVGEVRKLAAGGG 162
H HTL GK++ G N Y Q ++ S + P D+ + ++ G
Sbjct: 49 HRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQI---CCGSR 105
Query: 163 HSAVLTD 169
HS L+D
Sbjct: 106 HSLALSD 112
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T++G ++
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P + T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y++G GS G LGH +L D P V +L G+ + +ACG H+ ALT G ++ W
Sbjct: 161 DVYSFGDGSSGALGHGNL---DGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTW 217
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G + GQLG G T +P+ V V + V +ACG HTL DG
Sbjct: 218 GRGKYGQLGHGS-------------TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDG 264
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLTD 169
++ WG+ +GQ + P V G V +++AG H+ VL D
Sbjct: 265 RLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLD 314
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 54/213 (25%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G GQLG ++ +++++P RV ALD + +ACG HT A+T GAL +W
Sbjct: 55 EVYTTGSNDAGQLG---VRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASW 111
Query: 64 GGCQAGQLGL-------GPQTRSFSFIPNESDTYFRNI---------------------- 94
GG + GQLG G Q R + D +F +
Sbjct: 112 GGDEYGQLGFDSGNIVDGVQPR---IVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168
Query: 95 ---------------PILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
P LV GV +ACG +H+ DGK+ WG YGQ +
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 137 KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ P V V +V ++A GG H+ +T
Sbjct: 229 STQNIKLPVAVKALVDHDVIQIACGGDHTLAIT 261
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH S Q+ LP V AL + +ACGG HT A+TS G L++WG
Sbjct: 214 VFTWGRGKYGQLGHGSTQN---IKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG 270
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ G G + S P + + + V+ G HT+V + G+++G
Sbjct: 271 HGLWGQTGHGTKEDVLS--PKQVHQLEGRVLV--------QVSAGARHTVVLLDRGEVYG 320
Query: 125 WG 126
WG
Sbjct: 321 WG 322
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G G +GQLG + P + L G I +A HT LT +G +Y G
Sbjct: 4 VYALGRGDLGQLG---IGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
AGQLG+ G + + DT+ V +ACG HT+ G +
Sbjct: 61 SNDAGQLGVRGMEEQVVPIRVAALDTHM-----------VTHIACGFKHTVAVTETGALA 109
Query: 124 GWGYNSYGQAANEKSTY--AWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG + YGQ + P V ++AAGG H+ LT
Sbjct: 110 SWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALT 157
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G GQ GH G KE L P++V L+G + V+ G HT L +G +Y
Sbjct: 266 LFSWGHGLWGQTGH-----GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYG 320
Query: 63 WGGCQAGQLG 72
WG C+ QLG
Sbjct: 321 WGDCEQRQLG 330
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 291
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 178
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 254 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VV+LD I V+CG HT AL KG ++AWG
Sbjct: 55 VYTCGCNDLGQLGH---EKARKK--PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL I + R + L + Q VACG+ H+L R G+I
Sbjct: 110 LGSDGQLGLS--------IVEDCLRVPRTVKSLSEVHITQ-VACGYWHSLALARGGEIFS 160
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ ++ P + G +++AGG HS LT
Sbjct: 161 WGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLT 206
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I++WG GQLG Q G P+ + +L GI ++ GG H+ LT GA++ W
Sbjct: 157 EIFSWGQNKYGQLGLG--QQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG D R P+L+ V + CG HT ++G
Sbjct: 215 GRNKFGQLGLG-------------DNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G YGQ + + + P V +G V ++A G H+
Sbjct: 262 GVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHT 306
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E+L PRR +G ++DV CG HT L G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---------------HEKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
WG S GQ
Sbjct: 106 FAWGLGSDGQ 115
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG L D P + L + + CG HT ALT +G ++ +G
Sbjct: 211 IFGWGRNKFGQLG---LGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + P + ++ V +ACG HTL ++ GKI
Sbjct: 268 AGGYGQLGHNSTNHEVN--PRKVFELMGSV--------VSQIACGRQHTLAFIPSSGKID 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC 150
+G GQ + P+PV C
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPVKGC 344
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P + +F V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCE-FFEG-------KRVRDVGCGRRHTVFLLED 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EK+
Sbjct: 53 GTVYTCGCNDLGQLGHEKA 71
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 175 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 231
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 232 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 281
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 282 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 318
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 228 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 284
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 285 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 334
Query: 123 HGWG 126
+ WG
Sbjct: 335 YMWG 338
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 69 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 122
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 123 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 173
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 174 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 205
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 280 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 334
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 335 YMWGQCR-GQSVILPHLTHFS 354
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 283 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 338 MWGQCR-GQSVILPHLTHFS 356
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + S D P+ + AL G+ I +ACG H A+T G +++
Sbjct: 96 LQLYSWGWGDFGRLGHGN--SSDV-FNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 152
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F + V+++A G HT DG +
Sbjct: 153 WGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR-------VKMIAAGAEHTAAVTEDGDL 202
Query: 123 HGWGYNSYG 131
+GWG+ YG
Sbjct: 203 YGWGWGRYG 211
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + + LLP+++ A +G+ +K +A G HT A+T G LY WG
Sbjct: 150 VHSWGRNQNGQLG---LGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G LGLG R IP + + V + LVACG HT+ G I+
Sbjct: 207 WGRYGNLGLG--DRDDRLIPEKVSS--------VNGQKMVLVACGWRHTITVSSSGSIYT 256
Query: 125 WGYNSYGQ 132
+G++ YGQ
Sbjct: 257 YGWSKYGQ 264
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L D L+P +V +++G + VACG HT ++S G++Y +
Sbjct: 201 DLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G +P++ + + ++ G HT+ DGK++
Sbjct: 258 GWSKYGQLGHG--DFEDHLVPHKLEALKDTT--------ISQISGGWRHTMALAADGKLY 307
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GWG+N +GQ + P V++ + V ++A G H+ LT+A ++
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 358
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 21/132 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYT+G GQLGH + L+P ++ AL I ++ G HT AL + G LY WG
Sbjct: 254 IYTYGWSKYGQLGHGDFED---HLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWG 310
Query: 65 GCQAGQLGLGPQTRSFSFI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ GQ+G+G S + PNE V VACG HTL
Sbjct: 311 WNKFGQVGVGDNEDHCSPVQVNFPNEQK--------------VVQVACGWRHTLALTEAK 356
Query: 121 KIHGWGYNSYGQ 132
+ WG + GQ
Sbjct: 357 NVFSWGRGTSGQ 368
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALD---GIFIKDVACGGVHTCALTSKG 58
+ +WG G GQLGH GD E P V A D G V CG HT A + +
Sbjct: 41 VCSWGRGEDGQLGH-----GDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEE 95
Query: 59 -ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
LY+WG G+LG G + F+ P ++ R + +ACG SH L
Sbjct: 96 LQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR----------ITQIACGDSHCLAVT 145
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G +H WG N GQ + + P + G V+ +AAG H+A +T+ L
Sbjct: 146 VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 32/160 (20%)
Query: 23 SGDKELLPR---RVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRS 79
+GD E +P R V L ++ G H+ AL S G + +WG + GQLG G
Sbjct: 8 AGDDEAVPEAPERSVVL-------ISAGASHSVALLSGGVVCSWGRGEDGQLGHG----- 55
Query: 80 FSFIPNESDTYFRNIPILVV------PNGV-QLVACGHSHTLVYMRDG-KIHGWGYNSYG 131
D R +P ++ P GV +V CG HT Y + +++ WG+ +G
Sbjct: 56 --------DAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFG 107
Query: 132 QAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ + S+ + P P+ G + ++A G H +T A
Sbjct: 108 RLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVA 147
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 28/100 (28%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V + + VACG HT ALT
Sbjct: 306 LYGWGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALTEAK 356
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+++WG +GQLG G + RNIP ++
Sbjct: 357 NVFSWGRGTSGQLGHG-------------EIVDRNIPKMI 383
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGS---GSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTINQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T++G ++
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P + T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
WGYN+ GQ + + P V C+
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 283 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 338 MWGQCR-GQSVILPHLTHFS 356
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGS---GSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTINQPIPRRVTGCL 207
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 283 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 338 MWGQCR-GQSVILPHLTHFS 356
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + S D P+ + AL G+ I +ACG H A+T G +++
Sbjct: 96 LQLYSWGWGDFGRLGHGN--SSDV-FNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 152
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F + V+++A G HT DG +
Sbjct: 153 WGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR-------VKMIAAGAEHTAAVTEDGDL 202
Query: 123 HGWGYNSYG 131
+GWG+ YG
Sbjct: 203 YGWGWGRYG 211
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + + LLP+++ A +G+ +K +A G HT A+T G LY WG
Sbjct: 150 VHSWGRNQNGQLG---LGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G LGLG R IP + + V + LVACG HT+ G I+
Sbjct: 207 WGRYGNLGLG--DRDDRLIPEKVSS--------VNGQKMVLVACGWRHTITVSSSGSIYT 256
Query: 125 WGYNSYGQ 132
+G++ YGQ
Sbjct: 257 YGWSKYGQ 264
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L D L+P +V +++G + VACG HT ++S G++Y +
Sbjct: 201 DLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 64 GGCQAGQLGLGP-----QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G + GQLG G + + + + + ++ G + G
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
DGK++GWG+N +GQ + P V++ + V ++A G H+ LT+A ++
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 373
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVV---ALD---GIFIKDVACGGVHTCALTSKG-A 59
+WG G GQLGH GD E P V A D G V CG HT A + +
Sbjct: 43 SWGRGEDGQLGH-----GDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQ 97
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
LY+WG G+LG G + F+ P ++ R + +ACG SH L
Sbjct: 98 LYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR----------ITQIACGDSHCLAVTVA 147
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G +H WG N GQ + + P + G V+ +AAG H+A +T+ L
Sbjct: 148 GHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 32/160 (20%)
Query: 23 SGDKELLPR---RVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRS 79
+GD E +P R V L ++ G H+ AL S G + +WG + GQLG G
Sbjct: 8 AGDDEAVPEAPERSVVL-------ISAGASHSVALLSGGVVCSWGRGEDGQLGHG----- 55
Query: 80 FSFIPNESDTYFRNIPILVV------PNGV-QLVACGHSHTLVYMRDG-KIHGWGYNSYG 131
D R +P ++ P GV +V CG HT Y + +++ WG+ +G
Sbjct: 56 --------DAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFG 107
Query: 132 QAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ + S+ + P P+ G + ++A G H +T A
Sbjct: 108 RLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVA 147
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 57/147 (38%), Gaps = 36/147 (24%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-------------IFIKD--VACGGV 49
IYT+G GQLGH + L+P ++ AL F+ D GG
Sbjct: 254 IYTYGWSKYGQLGHGDFED---HLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGG 310
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI----PNESDTYFRNIPILVVPNGVQL 105
AL + G LY WG + GQ+G+G S + PNE V
Sbjct: 311 IQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK--------------VVQ 356
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
VACG HTL + WG + GQ
Sbjct: 357 VACGWRHTLALTEAKNVFSWGRGTSGQ 383
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 28/100 (28%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG GQ+G HCS P +V + + VACG HT ALT
Sbjct: 321 LYGWGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALTEAK 371
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+++WG +GQLG G + RNIP ++
Sbjct: 372 NVFSWGRGTSGQLGHG-------------EIVDRNIPKMI 398
>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii GT1]
Length = 1020
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++T GLG G+LGH GD+E LP V AL+ + I +ACG HT +TS G LY
Sbjct: 286 SLFTCGLGLNGRLGH-----GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLY 340
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LGLG TR +P RN V VA G H+ DG+
Sbjct: 341 TWGGAAFGKLGLG-STRGSQLLPKHVSGPLRN-------KAVVSVALGSQHSACVTTDGE 392
Query: 122 IHGWGYNSYGQ 132
++ WG G
Sbjct: 393 LYTWGQGRRGN 403
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG S GQLG +GD+ +PR V AL G +K VAC HT G+ Y
Sbjct: 153 ELYMWGANSEGQLG-----TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAY 207
Query: 62 AWGGCQAGQLGL 73
AWG G+LGL
Sbjct: 208 AWGCALNGRLGL 219
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR V AL I + V+ GG+ + G LY WG GQLG G D
Sbjct: 124 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTG-------------DR 170
Query: 90 YFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWG 126
++P LV V+ VAC HT+ + DG + WG
Sbjct: 171 RDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWG 210
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG + G+LG S + +LLP+ V L + VA G H+ +T+ G LY W
Sbjct: 339 LYTWGGAAFGKLGLGSTR--GSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTW 396
Query: 64 GGCQAGQL 71
G + G L
Sbjct: 397 GQGRRGNL 404
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 291
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG ++S + PRR+ +L+G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVRS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 178
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 254 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii VEG]
Length = 1015
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++T GLG G+LGH GD+E LP V AL+ + I +ACG HT +TS G LY
Sbjct: 286 SLFTCGLGLNGRLGH-----GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLY 340
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LGLG TR +P RN V VA G H+ DG+
Sbjct: 341 TWGGAAFGKLGLG-STRGSQLLPKHVSGPLRN-------KAVVSVALGSQHSACVTTDGE 392
Query: 122 IHGWGYNSYGQ 132
++ WG G
Sbjct: 393 LYTWGQGRRGN 403
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG S GQLG +GD+ +PR V AL G +K VAC HT G+ Y
Sbjct: 153 ELYMWGANSEGQLG-----TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAY 207
Query: 62 AWGGCQAGQLGL 73
AWG G+LGL
Sbjct: 208 AWGCALNGRLGL 219
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR V AL I + V+ GG+ + G LY WG GQLG G D
Sbjct: 124 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTG-------------DR 170
Query: 90 YFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWG 126
++P LV V+ VAC HT+ + DG + WG
Sbjct: 171 RDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWG 210
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG + G+LG S + +LLP+ V L + VA G H+ +T+ G LY W
Sbjct: 339 LYTWGGAAFGKLGLGSTR--GSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTW 396
Query: 64 GGCQAGQL 71
G + G L
Sbjct: 397 GQGRRGNL 404
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 291
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 201 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 258 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 95
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 96 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 146
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 147 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 178
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 254 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
Length = 410
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS GQLGH +L S + P+ V AL G+ IK VA G H+ A++S G LY WG
Sbjct: 208 LYSWGSGSHGQLGHGALTSLED---PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWG 264
Query: 65 GCQAGQLGL---------------GPQTRSFSFIPNESDTYFRNI---PILV-VPNGVQL 105
++GQLGL G + + F +I P LV + N ++
Sbjct: 265 WNESGQLGLPSRGLEEEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEI 324
Query: 106 --VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
++CG HT G ++ WG+ YGQ + P+PVD+
Sbjct: 325 SRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDY 370
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 36/142 (25%)
Query: 4 DIYTWGLGSVGQLGHCS-------------------LQSGDK---------ELLPRRVVA 35
D+Y WG GQLG S + + +K + P V
Sbjct: 259 DLYMWGWNESGQLGLPSRGLEEEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDI 318
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+ I ++CG HT A+TS G LY WG Q GQLG G + + P + YF +
Sbjct: 319 ANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVD---YFSSHS 375
Query: 96 ILVVPNGVQLVACGHSHTLVYM 117
+ V+ V CG +T V +
Sbjct: 376 L-----SVKDVVCGSWNTFVSV 392
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
G H LT+ G LY+WG GQLG G T S ++ +PI + V
Sbjct: 195 GSEHALLLTADGTLYSWGSGSHGQLGHGALT---SLEDPQAVEALWGVPI-------KAV 244
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
A G+ H+ G ++ WG+N GQ
Sbjct: 245 AAGNWHSAAVSSGGDLYMWGWNESGQ 270
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G SYGQ ++ P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL S G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSYGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSYGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPV 223
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGPTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGSGGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L SG + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG L + PRR+ +L G K +AC G H T++G
Sbjct: 66 EIFVLGTNCSGCLG---LGDAQSTIEPRRLDSLSG---KKIACLSYGSGPHVVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P + T N ++ VACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIE-------VACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 171 GEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG GQLGH S Q D LP+ V AL + +ACG H+ ALT G LYAWG
Sbjct: 107 VLSWGDNECGQLGHASDQ--DVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRD 119
GQLG + S+ N P+L+ +P V+ +ACG +H+ + +
Sbjct: 165 SNIYGQLG----------VKTPSELGQCNAPMLLTTLLGIP--VRAIACGGNHSFLISKS 212
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDW--CVGEVRKLAAGGGHSAVLTD 169
+ GWG N+ GQ T YP+ + +G VR +A G S LT+
Sbjct: 213 SAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTN 263
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 36/182 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH L S P ++ L I +ACG H+ ALT G + +WG
Sbjct: 57 VYACGSNDYAQLGH-ELSSKR----PLQIPELVDCVITQIACGSRHSMALTEWGQVLSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
+ GQLG + SD +P V V V +ACG++H+L G+
Sbjct: 112 DNECGQLG------------HASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGE 159
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG----------EVRKLAAGGGHSAVLTDAC 171
++ WG N YGQ + PS + C VR +A GG HS +++ +
Sbjct: 160 LYAWGSNIYGQLGVKT------PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSS 213
Query: 172 SL 173
++
Sbjct: 214 AV 215
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG + + P + L GI ++ +ACGG H+ ++ A++ W
Sbjct: 159 ELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGW 218
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ VACG ++ +G +
Sbjct: 219 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + P V +G + ++A G H+ + A
Sbjct: 268 FTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPA 316
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y WG S GQLG ++ ++ L P ++ + +ACG HT LT+ G +YA
Sbjct: 1 MELYCWGNASHGQLGLGGIED-EQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG ++ IP D I ACG H++ G++
Sbjct: 60 CGSNDYAQLGHELSSKRPLQIPELVDCVITQI------------ACGSRHSMALTEWGQV 107
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ + P V V + V ++A G HS LT
Sbjct: 108 LSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT 155
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 60 LYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
LY WG GQLGLG Q + S +P + D+ V +ACGH HTL
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDS------------AVNQIACGHRHTLF 50
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
GK++ G N Y Q +E S+ P VD CV + ++A G HS LT+
Sbjct: 51 LTASGKVYACGSNDYAQLGHELSSKRPLQIPELVD-CV--ITQIACGSRHSMALTE 103
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG L P ++ L + ++ VACG + LT++G ++ G
Sbjct: 215 VFGWGRNNCGQLG---LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCG 271
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM-RDG 120
GQLG G F NE +P +V+ + + VACG+ HTL + G
Sbjct: 272 AGAYGQLGHG-------FCGNEM------LPRMVMELMGSTISQVACGNRHTLAMVPARG 318
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGE---------------VRKLAAGGGH 163
+I+G+G S GQ + P V W +R++ +GG
Sbjct: 319 RIYGFGLGSSGQLGTRNTKSLNLPQMVIGPWVSPSGSALLQSSDAQIAVVIRQIFSGGDQ 378
Query: 164 SAVLT 168
S V T
Sbjct: 379 SIVTT 383
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 27/178 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+++WG G G+LGH + +P V AL G IK V CG HT A++ GAL+ W
Sbjct: 59 DVWSWGRGDDGRLGHAD---NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTW 115
Query: 64 GGCQAGQLGLGPQT------RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
GG G+LG G + R +FI E V+ +ACG HT +
Sbjct: 116 GGGMYGKLGHGNEVGHPAPCRVEAFIGRE----------------VEQIACGSRHTAALL 159
Query: 118 RDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G+++ WG G E + + + P ++ G ++ ++AA G H+A +T +L
Sbjct: 160 AGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGAL 217
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G G+LG Q +K ++ P V L G+ +K VACGG H+ +T G + +
Sbjct: 217 LWSWGEGKFGRLG----QGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTF 272
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
GG + GQLG G +T R +P LV G+ V CG SHT+ DG
Sbjct: 273 GGGEHGQLGHGDKTN-------------RTVPCLVKALEGAGIVQVTCGWSHTVTLSEDG 319
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEF 179
K+ +G +G+ + + + P V+ +V K+A+ H+ L A + + F
Sbjct: 320 KVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALCHAEQEQAVMSF 379
Query: 180 RLAESV-TLSNASEIEDV 196
+ + L N ++ DV
Sbjct: 380 DFLKDLRRLINNADFADV 397
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQ G+ S + D+E+ P V L + + +ACG HT LT +++WG
Sbjct: 8 LYSWGRGEDGQCGNGS--TNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWG 64
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
G+LG +D +++ +P LV ++ V CG HT G
Sbjct: 65 RGDDGRLG-------------HADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGA 111
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ WG YG+ + P V+ +G EV ++A G H+A L
Sbjct: 112 LWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAAL 158
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+ T+G G GQLGH GDK +P V AL+G I V CG HT L+ G ++
Sbjct: 268 DVLTFGGGEHGQLGH-----GDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVF 322
Query: 62 AWGGCQAGQLGLGPQTRS 79
+G G+LG G +S
Sbjct: 323 TFGNGDHGKLGHGANAKS 340
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK PR + AL I+D+ACG H+ A+ S G LY WG
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDK---PRLIEALKSKRIRDIACGSGHSAAIASNGELYTWG 3086
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T P D +V V VACG + T+ DG +
Sbjct: 3087 LGEYGRLGHGDTTTHLK--PKLVDA--------LVGQRVIQVACGSRDAQTMALTEDGSV 3136
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG +G+ S + P PVD G V ++ G S LT
Sbjct: 3137 YSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALT 3183
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWGLG G+LGH + L P+ V AL G + VACG T ALT G++Y
Sbjct: 3081 ELYTWGLGEYGRLGHGDTTT---HLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVY 3137
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G +S +P + GV V CG +L + G+
Sbjct: 3138 SWGDGDFGKLGRGGSDGCYSPLPVDRLNGL----------GVVQVECGAQFSLALTKYGE 3187
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ WG Y + + + P+ V+ G +V +A G H +TDA
Sbjct: 3188 VWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDA 3237
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + + D+ P+ + AL G I D+ACGG H+ A++S G LY WG
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDR---PKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWG 4058
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGH--SHTLVYMRDG 120
+ G+LG G +SD + ++ G ++ VACG + TL D
Sbjct: 4059 KGRYGRLGHG-----------DSDDQLKPT-VVTALQGYKVIDVACGSGDAQTLCVTDDD 4106
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P ++ G V K+ G S LT
Sbjct: 4107 NVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALT 4155
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 55/122 (45%), Gaps = 19/122 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PR+V AL G I +A G +H A + KG +Y WG
Sbjct: 4160 VYTWGKGDYHRLGHGT---DDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWG 4216
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQLG G T+ + P LV + VACG +HTL +
Sbjct: 4217 DNDEGQLGDG-------------TTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKA 4263
Query: 122 IH 123
H
Sbjct: 4264 TH 4265
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S D+ P+ + L + +ACG ++ A++S G L WG
Sbjct: 522 VYSWGNGDGGRLGHGDSFSCDE---PQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWG 578
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACGH--SHTLVYMRD 119
G+LG G I ++ +IP +V NG V VACG S TL
Sbjct: 579 RGSYGRLGHG--------ICDDI-----SIPTVVTALNGHTVTHVACGSGDSQTLCVTNS 625
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G + WG YG+ S + P VD + + V K+ GG SA LT
Sbjct: 626 GIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALT 675
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P V L+G+ + V CG + ALT G ++ WG
Sbjct: 3136 VYSWGDGDFGKLGRGG---SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWG 3192
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3193 KGDYFRLGHG------------NDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQV 3240
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACSL 173
+ WG N +GQ N + PS V + +V ++A G HS VLTD +L
Sbjct: 3241 YAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTL 3294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G++G+LG + D ++P + ++ +FIK VA GG H AL+S+G +Y+
Sbjct: 3948 VYATGYGALGRLGTGGV---DSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYS 4004
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + TY R P L+ + + +ACG H+
Sbjct: 4005 WGEGDDGKLGHGNRI-----------TYDR--PKLIEALLGTEIVDIACGGHHSAAISSA 4051
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P+ V G +V +A G G + L
Sbjct: 4052 GWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTL 4100
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P+ + L IK VA GG H ALT G +++
Sbjct: 2976 LYACGEGTNGRLG---LGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFS 3032
Query: 63 WGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG G + I R+I ACG H+ +G
Sbjct: 3033 WGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDI------------ACGSGHSAAIASNG 3080
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
+++ WG YG+ + +T P VD VG+
Sbjct: 3081 ELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQ 3113
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++ TWG GS G+LGH C D +P V AL+G + VACG T +T+ G
Sbjct: 573 ELLTWGRGSYGRLGHGIC-----DDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI 627
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S +P D ++ V V CG +
Sbjct: 628 VFSWGDGDYGKLGRG--GSDGSKLPKIVDK--------LLDQNVVKVFCGGQFSAALTAH 677
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + + +P V+ +VR L+ G H +T+
Sbjct: 678 GEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITE 728
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4107 NVWSWGDGDYGKLGRGG---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTW 4163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++V A G H + G+
Sbjct: 4164 GKGDYHRLGHG------------TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGE 4211
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
++ WG N GQ + + P V G+ + ++A G H+
Sbjct: 4212 VYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHT 4255
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D LP+ V L + V CGG + ALT+ G +Y WG
Sbjct: 628 VFSWGDGDYGKLGRGG---SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWG 684
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+LG G NE F + + V+ ++ G+ H L D ++G
Sbjct: 685 KGDHYRLGHG----------NEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734
Query: 125 WGYN 128
WG N
Sbjct: 735 WGRN 738
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL QLG G K LP L + +A G ++ +G LYA G
Sbjct: 2924 VYVWGLNDKDQLGGLK---GSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG 2980
Query: 65 GCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG IP S + + V G H L +DGK+
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVA----------VHSGGKHALALTQDGKV 3030
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + P ++ + +R +A G GHSA +
Sbjct: 3031 FSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI 3076
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + + P V L G + VA G +H A+T G +YAW
Sbjct: 3187 EVWTWGKGDYFRLGHGNDHHVRR---PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAW 3243
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G R S + N D V VACG SH++ ++
Sbjct: 3244 GDNDHGQQGNGSTMVNRKPSLVHNLEDA------------KVNRVACGSSHSIAWV 3287
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
H ++YTWG G +LGH G++E P+ V L ++D++ G +H A+T
Sbjct: 677 HGEVYTWGKGDHYRLGH-----GNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQL 731
Query: 60 LYAWGGCQAGQL 71
+Y WG A Q+
Sbjct: 732 VYGWGRNDACQI 743
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + +A G A+T+ G +YA G
Sbjct: 3896 IYGWGHNHRGQLGGLE---GAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATG 3952
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G +P T +I + + V G H L +G ++
Sbjct: 3953 YGALGRLGTG--GVDSVMVP----TLLESIQHVFIKKVA--VNSGGKHCLALSSEGHVYS 4004
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA ++ A
Sbjct: 4005 WGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSA 4051
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA 107
G H ALT+KG +Y+WG G+LG G SF +E I +L V +A
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGD-----SFSCDEPQV----IEVL-SDRTVTYIA 559
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAV 166
CG +++ G++ WG SYG+ + P+ V G V +A G G S
Sbjct: 560 CGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQT 619
Query: 167 L 167
L
Sbjct: 620 L 620
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG GQLG + + PR V AL G I VACG HT A ++ A ++
Sbjct: 4211 EVYTWGDNDEGQLGDGTTHAQQS---PRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 282 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 337 YMWGQCR-GQSVILPHLTHFS 356
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG S E P V++L+G+ ++ GG H+ AL+S GAL+ WG
Sbjct: 161 LFCWGDNSSGQLGIGKTHSSMSE--PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ GQLG+ DT R +P L+ GV V+CG HT V DG
Sbjct: 219 KNEYGQLGV-------------HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGG 265
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G + GQ + + + + P V +G V ++A G H+ L +
Sbjct: 266 VFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPS 315
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQ+G S + +P+ + L + + +ACG H+ ALT G L+ WG
Sbjct: 106 VFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWG 165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRDGKI 122
+GQLG+G S S P+L + NGV L++ G +H+ G +
Sbjct: 166 DNSSGQLGIGKTHSSMS----------EPAPVLSL-NGVPFMLISAGGAHSFALSSSGAL 214
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
GWG N YGQ +T P+ + + V ++ G H+AVLT
Sbjct: 215 FGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLT 261
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLG + P V A++ I V CG HT A++ +G ++AWG
Sbjct: 56 VYTCGSNEFGQLGQEKSHTN-----PESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWG 110
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+GLG + + + T + + L + VQ +ACG +H++ G +
Sbjct: 111 DNSYGQIGLGSKVK------EKVQTIPKMLKGLAKMSVVQ-IACGCNHSMALTISGHLFC 163
Query: 125 WGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG NS GQ K+ + P+PV G ++AGG HS L+ + +L
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGAL 214
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G+ GQLGH S E PR+V L G + +ACG HT AL S G +Y +
Sbjct: 266 VFTFGCGTSGQLGH---NSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTF 322
Query: 64 GGCQAGQLGLG 74
G GQLGLG
Sbjct: 323 GRGGDGQLGLG 333
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALD-GIFIKDVACGGVHTCALTSKGALY 61
++ WG S GQLG + ++E + PR + L+ +++V+CG HT L G +Y
Sbjct: 1 MFCWGKCSEGQLG---VGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVY 57
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G + GQLG Q +S + N + + + V CG +HT+ G
Sbjct: 58 TCGSNEFGQLG---QEKSHT---NPESVH------AIETFTITKVTCGKAHTVAVSDQGL 105
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAC 171
+ WG NSYGQ S V V + K+ G +V+ AC
Sbjct: 106 VFAWGDNSYGQIG--------LGSKVKEKVQTIPKMLKGLAKMSVVQIAC 147
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I ++CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L Q VACG+ H+L + G I
Sbjct: 110 LGSDGQLGLNNFEECIR-VP-------RNIKSLSDVQVAQ-VACGYWHSLALSKGGHIFS 160
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ + + P + G ++AAGG HS LT
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALT 206
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG GQLG +G +P+ + +L GI +A GG H+ ALT GA++ WG
Sbjct: 158 IFSWGQNRYGQLGLG--MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ GQLGL +DT R P L+ V ++CG HT ++G
Sbjct: 216 RNKFGQLGL-------------NDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGG 262
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + + + P V +G V ++A G H+ T +
Sbjct: 263 VFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPS 312
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ G ++DV CG HT L G +Y G
Sbjct: 4 WGNASYGQLG---LGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDGKI 122
GQLG +S R P VV Q++ +CG SHTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQIIVALSCGESHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
WG S GQ
Sbjct: 106 FSWGLGSDGQ 115
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P + + +F V+ V CG HT + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCE-FFHG-------KRVRDVGCGRRHTAFLLED 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + L+ G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQIIVALSCGESHTLALND 101
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G SYGQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGHE--REGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALASDGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GS GQLG + + D +PR + L+ I V+CG H AL S G + W
Sbjct: 104 QLFSWGAGSDGQLG--LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 162 GKNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGA 210
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GWG N+ GQ P V +V ++ G H+AVLT +
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSYGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Query: 4 DIYTWGLGSV-----GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
D+Y WG GSV LG+ SL+ +LLP +V +L + + V+ G H+ AL S G
Sbjct: 644 DVYMWGRGSVKNPPLSTLGNGSLED---QLLPTKVESLSEVVL--VSIGYYHSAALKSNG 698
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLV 115
L WG + GQLG G D + IP +V + V V CG HT+
Sbjct: 699 ELLTWGCGEDGQLGHG-------------DVLNQTIPKVVQTMTSHWVTQVQCGEKHTIC 745
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
++GK+ WG + YGQ + P V + ++A G H AVLT+A
Sbjct: 746 LTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNA 801
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 50/209 (23%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ TWG G GQLGH GD + +P+ V + ++ V CG HT LT G ++
Sbjct: 699 ELLTWGCGEDGQLGH-----GDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVF 753
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI----------------LVVPNG--- 102
WG + GQLGLG ++ + + S + I I LV NG
Sbjct: 754 TWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAAM 813
Query: 103 -------------------VQLVACGHSHTLVYMRDGKIHGWGY-NSYGQAANEKSTYAW 142
++ ++CGH T G ++ WG G N+
Sbjct: 814 GSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQELGHGTNQSEL--- 870
Query: 143 YPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+P VD + +R+++ GG H A LTD+
Sbjct: 871 HPKLVDGLRSQSIRQISCGGRHMAFLTDS 899
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G +LGH + QS EL P+ V L I+ ++CGG H LT G +Y
Sbjct: 851 DVYTWGSGQ--ELGHGTNQS---ELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTC 905
Query: 64 GGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
G GQLG G Q + P + D+ + I V+CG +H
Sbjct: 906 GKDPFGQLGHAQGDQNK-----PKKIDSLLKTTFI--------SVSCGENH 943
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 63/176 (35%)
Query: 5 IYTWGLGSVGQLG-----------------------------HCSLQSGDKELL------ 29
++TWG GQLG HC++ + +E+L
Sbjct: 752 VFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGA 811
Query: 30 ----------PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRS 79
P V AL + I+ ++CG T ALT G +Y WG Q +LG G
Sbjct: 812 AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHG----- 864
Query: 80 FSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
N+S+ + P LV ++ ++CG H GKI+ G + +GQ
Sbjct: 865 ----TNQSELH----PKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQ 912
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G SYGQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH ++ G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--VREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALASDGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GS GQLG + + D +PR + L+ I V+CG H AL S G + W
Sbjct: 104 QLFSWGAGSDGQLG--LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 162 GKNSHGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGA 210
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GWG N+ GQ P V +V ++ G H+AVLT +
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSYGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHVREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G G+LGH GD + +PR +L G I V CG HT A++SKG L+
Sbjct: 28 VYTWGRGDDGRLGH-----GDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WGG G+LG G + S P D+ +V V +ACG HT + G +
Sbjct: 83 WGGGMYGKLGHGNE--SGHSTPKRVDS--------LVGLAVVDIACGSRHTAIVTSRGCL 132
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG G A + + + + P ++ G+ V +L+A G H+ LTDA
Sbjct: 133 YTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDA 182
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G+LGH + +SG P+RV +L G+ + D+ACG HT +TS+G LY W
Sbjct: 79 NLFTWGGGMYGKLGHGN-ESGHST--PKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTW 135
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G G G T + P + + L VQL ACG HT G+++
Sbjct: 136 GDKENGVAGHG-DTEGHQYTP-------KLLERLSGKRVVQLSACGF-HTGCLTDAGEVY 186
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLT 168
WG +G+ + P V+ +G+ +++ GG HSAV+T
Sbjct: 187 TWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT 232
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LGH + ++ PR V L G ++CGG H+ +T+ G +Y +
Sbjct: 184 EVYTWGEGKFGRLGHGAERNCHS---PRLVETLLGKRPVQISCGGFHSAVVTADGKMYTF 240
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
GG + GQLG G D + P LV +GV L + CG SH++
Sbjct: 241 GGGEHGQLGHG-------------DKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSH 287
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+++ WG +G+ + P V+ VG+ V +A+ H+A L + S+
Sbjct: 288 EVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
T G +Y WG G+LG G + ++P + + + + V CG HT
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDN--GWKYVPRLTHSLAGQV--------ITHVTCGSYHTA 72
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG YG+ + + P VD VG V +A G H+A++T
Sbjct: 73 AVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVT 127
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGAL 60
+ + WG GQ C L +GD E PR + L V CG +H+ ALT G L
Sbjct: 446 VQVLGWGRNDRGQ---CGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRL 502
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
++WG GQLG+G +++ P E T R +P++ VACG H+ G
Sbjct: 503 FSWGDNTYGQLGIGTLVTNYTDRPTEL-TSLRGVPLV-------RVACGGFHSFALTISG 554
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ GWG N GQ YP+ + + V+ +A G H+A+LT
Sbjct: 555 SVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLT 603
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG +L + + P + +L G+ + VACGG H+ ALT G+++ WG
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDR-PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG 560
Query: 65 GCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLGLG + +S+ T RN+ +V + +ACG HT + DG +
Sbjct: 561 KNDVGQLGLGNKENKSYP-------TLLRNMRSQMVKH----IACGQDHTAMLTADGGVF 609
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 167
+G S GQ + + P V D ++ ++ G H+ VL
Sbjct: 610 LFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG +L + + P + +L G+ + VACGG H+ ALT G+++ WG
Sbjct: 162 LFSWGDNTYGQLGIGTLVTNYTDR-PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG 220
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG + T RN+ +V + +ACG HT + DG +
Sbjct: 221 KNDVGQLGLGNKEN------KAYPTLLRNMRSQMVKH----IACGQDHTAMLTADGGVFL 270
Query: 125 WGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 167
+G S GQ + + P V D ++ ++ G H+ VL
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G S GQLG + P +V AL+ + IK VACG HT A++ +G + WG
Sbjct: 58 LYMCGANSKGQLGQ-----DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ GL E+ R + L V+ V CG H++ RDG++
Sbjct: 113 RNDRGQCGLATGDI-------ENKPRPRILKHLASYQFVK-VCCGSLHSMALTRDGRLFS 164
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N+YGQ + Y P+ + G + ++A GG HS LT + S+
Sbjct: 165 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSV 216
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
L+ + IK VACG HT A++ + + WG GQ GL E+ R +
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDI-------ENKPRPRILR 476
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG- 152
L V+ V CG H++ RDG++ WG N+YGQ + Y P+ + G
Sbjct: 477 HLASYQFVK-VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGV 535
Query: 153 EVRKLAAGGGHSAVLTDACSL 173
+ ++A GG HS LT + S+
Sbjct: 536 PLVRVACGGFHSFALTISGSV 556
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 15/166 (9%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQLG + + + V L G ++ ++CG HT + G LY G
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG Q R+ + P + + +V+ + VACG HTL G++ GW
Sbjct: 64 NSKGQLG---QDRN-QYKPVQVSA----LETVVIKH----VACGDDHTLAVSDRGQVLGW 111
Query: 126 GYNSYGQAANEKSTYAWYPSP---VDWCVGEVRKLAAGGGHSAVLT 168
G N GQ P P + K+ G HS LT
Sbjct: 112 GRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++ +G GS GQLGH S E+ PR+V+ L G I V CG HT L SKG LYA+
Sbjct: 268 VFLFGQGSEGQLGH---GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAF 324
Query: 64 GGCQAGQLG 72
G GQLG
Sbjct: 325 GQGIHGQLG 333
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++ +G GS GQLGH S E+ PR+V+ L G I V CG HT L SKG LYA+
Sbjct: 608 VFLFGQGSEGQLGH---GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAF 664
Query: 64 GGCQAGQLG 72
G GQLG
Sbjct: 665 GQGIHGQLG 673
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 59 ALYAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
A + WG GQLG+G ++ + E T + VQ ++CG HT + +
Sbjct: 2 ATFCWGSSMEGQLGIGITGGQTTQEVAKEVTT--------LSGQRVQSISCGKHHTGIVL 53
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTD 169
DG ++ G NS GQ +++ Y PV E ++ +A G H+ ++D
Sbjct: 54 DDGTLYMCGANSKGQLGQDRNQY----KPVQVSALETVVIKHVACGDDHTLAVSD 104
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS GQLGH +L S + P+ V AL G+ IK VA G H+ A++S G LY WG
Sbjct: 187 LYSWGSGSHGQLGHGALTSLED---PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWG 243
Query: 65 GCQAGQLGL---------------GPQTRSFSFIPNESDTYFRNI---PILV-VPNGVQL 105
++GQLGL G + + F +I P LV + N ++
Sbjct: 244 WNESGQLGLPSRGLEEEKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEI 303
Query: 106 --VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
++CG HT G ++ WG+ YGQ + P+PVD+
Sbjct: 304 SRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDY 349
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 36/142 (25%)
Query: 4 DIYTWGLGSVGQLGHCS-------------------LQSGDK---------ELLPRRVVA 35
D+Y WG GQLG S + + +K + P V
Sbjct: 238 DLYMWGWNESGQLGLPSRGLEEEKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDI 297
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+ I ++CG HT A+TS G LY WG Q GQLG G + + P + YF +
Sbjct: 298 ANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVD---YFSSHS 354
Query: 96 ILVVPNGVQLVACGHSHTLVYM 117
+ V+ V CG +T V +
Sbjct: 355 L-----SVKDVVCGSWNTFVSV 371
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
G H LT+ G LY+WG GQLG G T S ++ +PI + V
Sbjct: 174 GSEHALLLTADGTLYSWGSGSHGQLGHGALT---SLEDPQAVEALWGVPI-------KAV 223
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
A G+ H+ G ++ WG+N GQ
Sbjct: 224 AAGNWHSAAVSSGGDLYMWGWNESGQ 249
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+PV
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL---PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++Y+WG S +LG+ + G +L P L+ I DVACG H+ ALT +G +
Sbjct: 97 EVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEEGEV 156
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG GQ+G T S P R + + + ++CG + ++V +G
Sbjct: 157 YAWGQNNCGQVGSNISTNQGS--P-------RQVTSNLAGKKIVHISCGQTSSMVVTDNG 207
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDACSL 173
+++GWGYN GQ PS V +G V K+A G H+ L+D L
Sbjct: 208 EVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKL 261
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 16/158 (10%)
Query: 4 DIYTWGLGSVGQLG-HCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG + GQ+G + S G PR+V + L G I ++CG + +T G +Y
Sbjct: 155 EVYAWGQNNCGQVGSNISTNQGS----PRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVY 210
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG+G + P+ + I ++++ VACG++HTL +GK
Sbjct: 211 GWGYNGVGQLGIGNYVNQMT--PSRVGSL---IGVVIIK-----VACGYAHTLALSDEGK 260
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
++ WG NSYGQ T A P V +G + +AA
Sbjct: 261 LYVWGGNSYGQLGIGNKTNACNPVLVTHEMGRISDIAA 298
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 4 DIYTWGLGS--VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
D +GLG+ G LG + L P+++ L IK ACG G H ALT KG +
Sbjct: 42 DKSVYGLGNNIAGCLG---ISDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLALTEKGEV 98
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYM 117
Y+WG +LG G + + I NIP L ++ VACG H+L
Sbjct: 99 YSWGHNSYCELGNGTCNQGLTPI-------LVNIPTLGAGLNMKCIVDVACGSHHSLALT 151
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLTD 169
+G+++ WG N+ GQ + ST P V + ++ ++ G S V+TD
Sbjct: 152 EEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTD 205
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG GS GQLG C +K P+++ L GI I V+CG H+ AL+ G +Y+
Sbjct: 94 VFAWGAGSEGQLGIEECK----EKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYS 149
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
WG GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 150 WGKNSQGQLGLGKE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSG 198
Query: 121 KIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
GWG N+ GQ A N + P + +V ++ G H+AVLT
Sbjct: 199 TSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQ 251
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 146 QVYSWGKNSQGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 203
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQL L S +++ ++ + +CG+ HT V ++GK+
Sbjct: 204 GSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYI-------SCGYEHTAVLTQNGKVF 256
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P V+ G V ++ G H+
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVSQIDCGSYHT 297
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G + GQLG + +E P + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 42 VHSCGDNTQGQLGR---RGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWG 98
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLG+ + + F P + T G+++ V+CGH H+L DG++
Sbjct: 99 AGSEGQLGI-EECKEKIFTPKKIKTL----------TGIKIIQVSCGHYHSLALSEDGQV 147
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG NS GQ K + P V G + ++AAGG HS L+
Sbjct: 148 YSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 195
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
G ++ ACG H+ L S G +++ G GQLG + R E + + L
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE------ERPGLIKALETL 73
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVR 155
+ V LV+CG H+L G++ WG S GQ E+ + P + G ++
Sbjct: 74 L----VGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKII 129
Query: 156 KLAAGGGHSAVLTD 169
+++ G HS L++
Sbjct: 130 QVSCGHYHSLALSE 143
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQL + + P + AL + + ++CG HT LT G ++ +G
Sbjct: 201 FGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGD 260
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
GQLG P + P + + + V + CG HTL Y+
Sbjct: 261 NSCGQLGYNPTAKKRG--PQQVEG---------IDGLVSQIDCGSYHTLAYV 301
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G G LGH G++++ P + + AL G+ + + CGG+H+ LT +Y+
Sbjct: 1615 VFSWGNGEGGLLGH-----GNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYS 1669
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG + GQLG+ + NE + P V N GV +A G +H+L
Sbjct: 1670 WGRNEGGQLGIDKK-----LFTNEK--CYLTTPKRVKGNLEGVGVIQIAAGEAHSLALAL 1722
Query: 119 DGKIHGWGYNSYGQ 132
+G+++GWGYN GQ
Sbjct: 1723 NGQVYGWGYNMNGQ 1736
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 5 IYTWGLGSVGQLGHCS------LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+++WG + GQ+G+ L K P+ +V L + VACG H+ A+T G
Sbjct: 1502 MFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITYAG 1561
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+ AWG QLGLG ++ S P PI + N +Q V+CG HTL
Sbjct: 1562 TVLAWGDNSHSQLGLGEKSPSSVPFPT---------PIPALTN-IQSVSCGSEHTLALDY 1611
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG G + P ++ G V + GG HS VLT
Sbjct: 1612 IGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLT 1662
Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 58 GALYAWGGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSH 112
G +++WG GQ+G P+ S N P L+VP V VACG+ H
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLL------SKKIKVNFPKLIVPLKDTIVTSVACGYQH 1553
Query: 113 TLVYMRDGKIHGWGYNSYGQ-AANEKS-TYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
++ G + WG NS+ Q EKS + +P+P+ + ++ ++ G H+ L
Sbjct: 1554 SVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIP-ALTNIQSVSCGSEHTLAL 1609
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCAL----TSKGALYAWGGCQAGQLGLGPQTRSFSFI 83
+P+++ I + V+CG H+ AL T L+AWG + GQLG+G +T S +
Sbjct: 1807 FIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIG-ETGQNSSV 1865
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
P TY +++ +ACG H+LV D
Sbjct: 1866 PRPI-TYLQDVTTYS-------MACGSYHSLVVAND 1893
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWGL S GQLG L LLP +V L + + +A GG H A G L+ WG
Sbjct: 946 LWTWGLNSYGQLGGGPL---SYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWG 1000
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG GP ++S + + + GV +A G SHTL +DG +
Sbjct: 1001 LNSYGQLGGGPLSQSLTPVQVQVQGL----------TGVAAIAAGFSHTLAVRQDGTVWS 1050
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+YGQ + + + P V G V ++AG H+ L
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLTG-VTAISAGDAHTVAL 1092
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWGL S GQLG L + L P +V + +A G HT A+ G +++WG
Sbjct: 996 LWTWGLNSYGQLGGGPL---SQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWG 1052
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG G +S + + + T GV ++ G +HT+ RDG +
Sbjct: 1053 GNAYGQLGDGTTAQSLTPVQVQGLT------------GVTAISAGDAHTVALRRDGTVWA 1100
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS+GQ + +T+ P V G V +AAG H+ L
Sbjct: 1101 WGRNSWGQLGDGTTTHRATPVQVQGLTG-VIAIAAGSLHTVAL 1142
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG+ + + P +V L G+ +A G+HT AL G L+AWG
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYR---PEQVQGLTGV--TAIAASGIHTVALRQDGTLWAWG 346
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T F+ + + T GV +A G+ +T+ +DG +
Sbjct: 347 NNSSGQLGDGTTTVRFTPVQVQGLT------------GVTAIAAGYLYTVASKQDGTVWA 394
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG N +GQ + +T P V G V +AAG
Sbjct: 395 WGDNEWGQLGDGTTTRRLTPVQVQGLTG-VTAIAAG 429
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + P +V L G+ +A G +HT AL G ++AWG
Sbjct: 1098 VWAWGRNSWGQLGDGTT---THRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWG 1152
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R P+ V GV +A G HT+ +DG +
Sbjct: 1153 RNSWGQLG-------------DGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVW 1199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG+N GQ + +T P+ V G V +AAG H+A +
Sbjct: 1200 AWGFNDLGQLGDGTTTRRLTPAQVQGLTG-VTTIAAGYFHTAAV 1242
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG + + L P +V L G+ ++ G HT AL G ++AWG
Sbjct: 1048 VWSWGGNAYGQLGDGTTA---QSLTPVQVQGLTGV--TAISAGDAHTVALRRDGTVWAWG 1102
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R P+ V GV +A G HT+ +DG +
Sbjct: 1103 RNSWGQLG-------------DGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVW 1149
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS+GQ + +T+ P V G V +AAG H+ L
Sbjct: 1150 AWGRNSWGQLGDGTTTHRATPVQVQGLTG-VIAIAAGSLHTVAL 1192
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWGL S GQLG L LLP +V L +A G HT A+ G ++AWG
Sbjct: 792 LWTWGLNSYGQLGGGPL---SYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWG 848
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGK 121
+GQLG G +S + P+ V G V +A G H +DG
Sbjct: 849 SNFSGQLGDGTTAQSLT-------------PVQVQVQGLMDVTAMAAGGYHMAAAGQDGT 895
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ +Y P V + +V +AAGG H A
Sbjct: 896 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLM-DVTAMAAGGYHMA 938
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+G GQLG + G P +V L G+ +A G HT AL G ++AWG
Sbjct: 542 VWAWGVGFWGQLGDGT---GMDRSTPVQVQGLTGV--TAIAAGSNHTVALRQDGTVWAWG 596
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + P + +P + G +A G SHT+ ++DG +
Sbjct: 597 FNNYGQLGDG--TTAGHLTPVQ-------VPGV---TGAVAIAAGGSHTVALLQDGTVWT 644
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN +GQ + +T+ P V + +V +A GH+ +
Sbjct: 645 WGYNIWGQLGDGTTTHRHSPVQVQ-GLADVIAIATNNGHTVAV 686
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + L P +V L G+ VA H A+ G ++AWG
Sbjct: 492 VWAWGDNARGQLGDGTT---TRRLTPVQVQGLAGV--TAVAASDYHLVAVRQDGTVWAWG 546
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + R+ P+ V GV +A G +HT+ +DG +
Sbjct: 547 VGFWGQLG-------------DGTGMDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVW 593
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG+N+YGQ + + P V G V +AAGG H+ L
Sbjct: 594 AWGFNNYGQLGDGTTAGHLTPVQVPGVTGAV-AIAAGGSHTVAL 636
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG VGQLG + + L P +V L G+ ++ T AL G ++AWG
Sbjct: 192 VWTWGDNLVGQLGDGT---STQRLTPVQVQGLTGVIA--ISANDSETVALRQDGTVWAWG 246
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G T F+ P+ V+ GV +A G + +DG +
Sbjct: 247 NNSSGQLGDGTTTVRFT-------------PVQVLGLTGVTAIAAGGGFAVALRQDGTLW 293
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG NS GQ N + ++ P V G V +AA G H+ L +L
Sbjct: 294 AWGSNSRGQLGNGTTFGSYRPEQVQGLTG-VTAIAASGIHTVALRQDGTL 342
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG S GQLG S+Q P +V L G+ VA G H+ AL G ++ W
Sbjct: 142 VWTWGRNSSGQLGDGTSIQ----RFSPVQVQGLTGV--TAVAAGRNHSAALGQGGTVWTW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T+ + + + T GV ++ S T+ +DG +
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT------------GVIAISANDSETVALRQDGTVW 243
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG NS GQ + +T + P V G V +AAGGG + L +L
Sbjct: 244 AWGNNSSGQLGDGTTTVRFTPVQVLGLTG-VTAIAAGGGFAVALRQDGTL 292
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG +GQLG + + L P +V L G+ +A G HT A+ G + WG
Sbjct: 1198 VWAWGFNDLGQLGDGTT---TRRLTPAQVQGLTGV--TTIAAGYFHTAAVRQDGTAWTWG 1252
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R P+ V GV +A G++HT+V DG +
Sbjct: 1253 FNLWGQLGDGTFTD-------------RATPVQVQGLTGVSALAAGYAHTVVVGEDGTVW 1299
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS Q N ST P V+ G LAAG H+ ++
Sbjct: 1300 AWGNNSGTQLGNGSSTDRSTPVQVEALTGAF-SLAAGRFHTVAMS 1343
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 45 ACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ 104
A G HT A+ G ++AWG GQLG G TR FS P+ V+ G
Sbjct: 79 AGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFS-------------PVQVM-TGAT 124
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+A G HT+ +DG + WG NS GQ + S + P V G V +AAG HS
Sbjct: 125 AIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG-VTAVAAGRNHS 183
Query: 165 AVL 167
A L
Sbjct: 184 AAL 186
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + L P +V + + +A GG H A G L+ WG
Sbjct: 844 VWAWGSNFSGQLGDGTTA---QSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWG 900
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG GP S+ +P + V +A G H +DG +
Sbjct: 901 LNSYGQLGGGP--LSYRLLPVQVQGLMD----------VTAMAAGGYHMAAAGQDGTLWT 948
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
WG NSYGQ +Y P V + V +AAGG H A
Sbjct: 949 WGLNSYGQLGGGPLSYRLLPVQVQGLM-SVTAMAAGGYHMA 988
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 19/144 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + L P +V + G +A GG HT AL G ++ WG
Sbjct: 592 VWAWGFNNYGQLGDGTTAG---HLTPVQVPGVTGAVA--IAAGGSHTVALLQDGTVWTWG 646
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R+ P+ V V +A + HT+ +DG +
Sbjct: 647 YNIWGQLG-------------DGTTTHRHSPVQVQGLADVIAIATNNGHTVAVRQDGTVW 693
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
WG NS GQ + +T P V
Sbjct: 694 TWGLNSSGQLGDGTTTQRLTPVQV 717
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+TWG GQLG + P +V L G+ +A G HT + G ++AWG
Sbjct: 1249 WTWGFNLWGQLGDGTF---TDRATPVQVQGLTGV--SALAAGYAHTVVVGEDGTVWAWGN 1303
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIHG 124
QLG G T R+ P+ V G +A G HT+ DG G
Sbjct: 1304 NSGTQLGNGSSTD-------------RSTPVQVEALTGAFSLAAGRFHTVAMSPDGAGWG 1350
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
WG N+ GQ + T A P+PV+ V E
Sbjct: 1351 WGRNNLGQVGD--GTTADRPTPVNVMVQE 1377
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + P +V L G+ +A G ++T A G ++AWG
Sbjct: 342 LWAWGNNSSGQLGDGTT---TVRFTPVQVQGLTGV--TAIAAGYLYTVASKQDGTVWAWG 396
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G TR + + + T GV +A G+ +T+ +DG +
Sbjct: 397 DNEWGQLGDGTTTRRLTPVQVQGLT------------GVTAIAAGYLYTVASKQDGTVWA 444
Query: 125 WGYNSYGQ 132
WG N Q
Sbjct: 445 WGDNKRSQ 452
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++TWGL S GQLG + + L P +V L D I + T A+ L+AW
Sbjct: 692 VWTWGLNSSGQLGDGTT---TQRLTPVQVHGLTDATAILTSSS---QTVAMRQDRTLWAW 745
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKI 122
G GQLG G TR R P+ V V +A G H +DG +
Sbjct: 746 GDNHWGQLGDGTTTR-------------RLTPVQVQGLMDVTAMAAGGYHMAAAGQDGTL 792
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
WG NSYGQ +Y P V
Sbjct: 793 WTWGLNSYGQLGGGPLSYRLLPVQVQ 818
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + P +V+ +A G HT A + G ++ WG
Sbjct: 94 VWAWGNNDDGQLGDGTT---TRRFSPVQVM----TGATAIAAGIYHTVAASQDGTVWTWG 146
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G + FS + + T GV VA G +H+ + G +
Sbjct: 147 RNSSGQLGDGTSIQRFSPVQVQGLT------------GVTAVAAGRNHSAALGQGGTVWT 194
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
WG N GQ + ST P V G +
Sbjct: 195 WGDNLVGQLGDGTSTQRLTPVQVQGLTGVI 224
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + L P +V L G+ +A G ++T A G ++AWG
Sbjct: 392 VWAWGDNEWGQLGDGTT---TRRLTPVQVQGLTGV--TAIAAGYLYTVASKQDGTVWAWG 446
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ QLG G ++ + P E G+ +A + T+ +DG +
Sbjct: 447 DNKRSQLGEGAVSQRHT--PGEVQGL----------EGITAIAASNLLTVAVRQDGTVWA 494
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD 148
WG N+ GQ + +T P V
Sbjct: 495 WGDNARGQLGDGTTTRRLTPVQVQ 518
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV-HTCALTSKGALYAW 63
IY+ G GQ G Q +K R+ A + + I +V+ G H A+ K +YAW
Sbjct: 55 IYSCGSNDYGQTGR---QRNNKRF--ARIDAFESMRITNVSSNGANHNLAINDKNCIYAW 109
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG+ Q + F P R I L VQ VACG SH+L + DG +
Sbjct: 110 GDNSDGQLGVTDQNLKQFYRTP-------RQIKSLSKFAVVQ-VACGQSHSLAVINDGTV 161
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N YGQ + + + P + G + ++AAGG HS +T++ +L
Sbjct: 162 FSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGAL 213
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + S + P++++ L G +I +A GG H+ A+T+ GAL WG
Sbjct: 161 VFSWGSNRYGQLG---IDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG S S + + ACG HT V ++G +
Sbjct: 218 KNSFGQLGLGTNDGVLSPTCVSS----------LRSQHIAYAACGEDHTAVLTKEGGVFT 267
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+G S GQ + ++ P V +G V G A+ D SL
Sbjct: 268 FGAGSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRFYALQQDEVSL 316
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG S GQLG PR++ +L + VACG H+ A+ + G +++WG
Sbjct: 106 IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWG 165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG+ S E + +V +A G +H+L G +
Sbjct: 166 SNRYGQLGIDSNVSSV-----EPKQILKLSGFYIVQ-----IAAGGAHSLAITNSGALLT 215
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLT 168
WG NS+GQ + P+ CV +R A G H+AVLT
Sbjct: 216 WGKNSFGQLGLGTNDGVLSPT----CVSSLRSQHIAYAACGEDHTAVLT 260
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++AWG GQLGLG + D L + ++L++CG +HT++ ++D
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVD--------LTTNHTIKLISCGLNHTILLLQD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G+I+ G N YGQ +++
Sbjct: 53 GQIYSCGSNDYGQTGRQRN 71
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 89/221 (40%), Gaps = 30/221 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---------DGIFIKDVACGGVHTCALT 55
+YT+GLG GQLGH E PRRV AL G I +ACG HT AL
Sbjct: 260 VYTFGLGVFGQLGHGV---SSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALG 316
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---------VQLV 106
G ++ WG + GQ G T ++ I P + V
Sbjct: 317 VSGTVWTWGSAEYGQQG---GTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHV 373
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
+CGH H L RDG ++ WG+ SYG + + P + GE + + AAG HS
Sbjct: 374 SCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSL 433
Query: 166 VLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALA 206
+ S +F++A N DV+ R + A
Sbjct: 434 AVNAGSSTLFAFDFKVA-----LNNPRYSDVSFRVDGKTFA 469
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG QLG L + +P+ V L G+ I CG H+ L++ G +Y +
Sbjct: 207 EVYSWGFNEKCQLG---LGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTF 263
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQ-------LVACGHSHTLV 115
G GQLG G + + + R + LV GV+ +ACG HTL
Sbjct: 264 GLGVFGQLGHGVSS---------DERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLA 314
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
G + WG YGQ + T A+ DW G+
Sbjct: 315 LGVSGTVWTWGSAEYGQ---QGGTNAYE----DWATGQ 345
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P V L + + +VA G + A+TS+G +Y+WG + QLGLG
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLG-------------HR 224
Query: 90 YFRNIPILVVP-NGVQLVA--CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
Y +++P LV GV +V+ CG H+++ G ++ +G +GQ + S+ +P
Sbjct: 225 YNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRR 284
Query: 147 VDWCV 151
V+ V
Sbjct: 285 VEALV 289
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G G VG+LG + + + L P + G I+ VACG H+ A+ G +Y WG +
Sbjct: 1 GTGKVGELG--AGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKE 58
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G + + + P + R+ ++ GV CG++H L GK++ WG
Sbjct: 59 GQLGNGERKAANALKPVRVEG-LRHERVVA---GV----CGYNHCLAVTVGGKLYQWG 108
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 59/167 (35%), Gaps = 43/167 (25%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG GQLG+ ++ + L P RV L + CG H A+T G LY W
Sbjct: 49 DVYVWGRAKEGQLGNGERKAANA-LKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQW 107
Query: 64 G---------------GCQAGQLGL----------------------GPQTRSFSFIPNE 86
G G G GL G + S + N
Sbjct: 108 GMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNF 167
Query: 87 SDTYFRNIPILVVPNGVQ-----LVACGHSHTLVYMRDGKIHGWGYN 128
P V G+Q VA G+S +L G+++ WG+N
Sbjct: 168 GSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFN 214
>gi|146183959|ref|XP_001027449.2| RCC1-like protein, HECT domain [Tetrahymena thermophila]
gi|146143420|gb|EAS07207.2| RCC1-like protein, HECT domain [Tetrahymena thermophila SB210]
Length = 979
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYT+G+G G LGH + D +P+ ++ L I VACG HT ALT LY+WG
Sbjct: 117 IYTYGIGEYGSLGHGGILQLD---IPKNILKLQEKKIIQVACGEFHTLALTETFDLYSWG 173
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG------VQLVACGHSHTLVYMR 118
GQLG G + S +P ++ + NG ++ + CG H+L
Sbjct: 174 RGFEGQLGTGKDSSS---VPCYVKFFYEKYDM---KNGADIKKRIKFITCGAYHSLAITD 227
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G+++ WG GQ K YP V+
Sbjct: 228 SGQLYSWGEARLGQTGTGKKKSEPYPVIVN 257
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 48/189 (25%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-----------IKDVACGGVHT 51
D+Y+WG G GQLG D +P V + IK + CG H+
Sbjct: 167 FDLYSWGRGFEGQLG----TGKDSSSVPCYVKFFYEKYDMKNGADIKKRIKFITCGAYHS 222
Query: 52 CALTSKGALYAWGGCQAGQLGLG-------PQTRSFSFIPN------------------- 85
A+T G LY+WG + GQ G G P + + PN
Sbjct: 223 LAITDSGQLYSWGEARLGQTGTGKKKSEPYPVIVNLNAQPNSMFDKRVNTEQNQMSGVNK 282
Query: 86 -ESDTYFRNIPILVVPNGVQ------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
E + I +P+G Q V+ G+ HT+ +G+++ WG+N+ GQ E +
Sbjct: 283 IELQHNHDELKINPIPSGNQNNQKIICVSGGYGHTVAITEEGELYSWGFNTKGQLGMEGT 342
Query: 139 TYAWYPSPV 147
+YP V
Sbjct: 343 KSLYYPQRV 351
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 29/181 (16%)
Query: 31 RRVVALDGIF--------IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
R V L+ IF IK + CG HT +T G +Y +G + G LG G +
Sbjct: 80 RSVKNLEDIFQGFNDKGQIKKMVCGKKHTVFITEDGKIYTYGIGEYGSLGHGGILQ--LD 137
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA- 141
IP +NI L +Q VACG HTL ++ WG GQ K + +
Sbjct: 138 IP-------KNILKLQEKKIIQ-VACGEFHTLALTETFDLYSWGRGFEGQLGTGKDSSSV 189
Query: 142 -----WYPSPVDWCVG-----EVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNAS 191
++ D G ++ + G HS +TD+ L E RL ++ T S
Sbjct: 190 PCYVKFFYEKYDMKNGADIKKRIKFITCGAYHSLAITDSGQLYSWGEARLGQTGTGKKKS 249
Query: 192 E 192
E
Sbjct: 250 E 250
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN--ESDTYFRNIPILVVPN 101
V+ G HT A+T +G LY+WG GQLG+ T+S + P + D +P+
Sbjct: 310 VSGGYGHTVAITEEGELYSWGFNTKGQLGM-EGTKSL-YYPQRVKKDILGNELPLFAS-- 365
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
CG+++T + DG + WG + GQ
Sbjct: 366 ----AYCGYNNT--FAIDGNLWSWGGGNLGQ 390
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG +LG+ S G L P V + LD F+ D+ACGG H+ ALT+KG +YAW
Sbjct: 101 VYSWGYNDYCELGNKSTNEG---LTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAW 157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G +GQ+G G + IP N+ + NG ++V +CG S ++ G+
Sbjct: 158 GHNVSGQVGCGTILSTVQPIPK-----LLNVGL----NGKKVVHISCGDSSSVAVTDSGE 208
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
++ WG+N GQ T P V + + K+ G H+ L+D
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSD 257
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG GQ+G ++ S + + V L+G + ++CG + A+T G +Y+W
Sbjct: 153 EIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSW 212
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG T P + T+ + + ++ V CG+ HTL +G ++
Sbjct: 213 GHNGVGQLGLGNCTSQVE--PQKVATFAKIV--------IEKVVCGYMHTLALSDEGVLY 262
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
WG NSYGQ + W P+ ++
Sbjct: 263 VWGANSYGQLGLNTDSNVWIPTKLE 287
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYAW 63
+Y G + G LG QS + P+++ AL G +K A G G H ALT +G +Y+W
Sbjct: 48 VYGIGNNTYGCLGTGDTQS---TIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSW 104
Query: 64 G-------GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G G ++ GL P + +P+ D F V +ACG H+L
Sbjct: 105 GYNDYCELGNKSTNEGLTP-----TLVPSVLDDKF-----------VVDIACGGHHSLAL 148
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG----EVRKLAAGGGHSAVLTDA 170
G+I+ WG+N GQ P P VG +V ++ G S +TD+
Sbjct: 149 TNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDS 206
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 36 LDGIFIKDVACGGVH------TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
L+ FI +V V+ T +T +Y G G LG G +S
Sbjct: 18 LEPKFISNVRMAIVYGKAANETLLVTKDDMVYGIGNNTYGCLGTGD---------TQSTI 68
Query: 90 YFRNIPILVVPNGVQLVACGH-SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
Y + I L V+ A G H L +GK++ WGYN Y + N+ + P+ V
Sbjct: 69 YPKKIEALC-GKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVP 127
Query: 149 WCVGE--VRKLAAGGGHSAVLTD 169
+ + V +A GG HS LT+
Sbjct: 128 SVLDDKFVVDIACGGHHSLALTN 150
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 277 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVILPHLTHFS 351
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG +LG +S + E LPR V AL G+ I DV+CG T A+ + G +Y+WG
Sbjct: 104 LYVWGSNEYSKLGLG--ESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
G + D + +V GV + V CG HT+ +DG+I
Sbjct: 162 WG-----GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEI 216
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
WG YG+ N +S P P+++ + V +AAG S LTD L
Sbjct: 217 WAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGEL 268
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 5 IYTWGLG--SVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSKGAL 60
+Y+WG G ++ G G E PR + L G+ I V CG HT AL+ G +
Sbjct: 157 MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEI 216
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRD 119
+AWG + G+LG G ESDT PI + V +A G + +
Sbjct: 217 WAWGNGEYGRLGNG-----------ESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDN 265
Query: 120 GKIHGWGYNSYGQA------ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG NS Q A + P V+ G V+++AAG H+A +TD
Sbjct: 266 GELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTD 322
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I+ WG G G+LG+ D +P + + +A G + ALT G LY+W
Sbjct: 215 EIWAWGNGEYGRLGNGE---SDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSW 271
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTY-FRNIPILVVP-NG--VQLVACGHSHTLVYMRD 119
GG QLG+G D Y +IP+LV NG V+ +A G+ H D
Sbjct: 272 GGNSQNQLGIGGGLA--------MDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDD 323
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 324 GRLYMWG 330
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
A +++ ++Y WG GQLG GP + S I N + + + V G SH
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVK--SGIRNAYEELTPKLLEAFEGKAITHVEFGASH 94
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
+ DGK++ WG N Y +
Sbjct: 95 SAAIDEDGKLYVWGSNEYSK 114
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 53/245 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG S GQLGH L G + PRRV I ++CGG H+ A+ +Y+W
Sbjct: 1052 ELFTWGNNSQGQLGH-GLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSW 1110
Query: 64 GGCQAGQLGLG---PQTRS-------------------------------FSFIPNESDT 89
G + GQLG G PQ F+F N+S
Sbjct: 1111 GSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170
Query: 90 Y----FRN--IPI------LVVPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
F+N +P+ +V +G + +A GHSH+++ + +G I+ WG NS GQ +
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230
Query: 136 EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASEIE 194
+ P +D G+ + K++ G H+ +++ L + + E + L N S
Sbjct: 1231 GNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISE---LNSVYCWGQGEHMCLGNGSNKN 1287
Query: 195 DVASR 199
+++ +
Sbjct: 1288 ELSPK 1292
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VACG H ++S G L+ WG GQLG G + P +T F++ PI+
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVET-FKSSPII------ 1089
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGG 161
+++CG H++ + +I+ WG + YGQ + T P ++ G +V +A G
Sbjct: 1090 -MISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGY 1148
Query: 162 GHSAVLTDACSL 173
H+ VL + L
Sbjct: 1149 AHTMVLKKSGDL 1160
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 56/197 (28%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+WG S GQLGH +++ K L P+++ L G I ++CG HT A++ ++Y W
Sbjct: 1216 DIYSWGANSKGQLGHGNIE---KSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCW 1272
Query: 64 GGCQAGQLGLGPQTRSFS------FI--------------------PNESD--------- 88
G + LG G S FI N SD
Sbjct: 1273 GQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGG 1332
Query: 89 --------------TYFRNIPILVVP--NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSY 130
+F V+P N + +V + G + + +G ++ WGY ++
Sbjct: 1333 GEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNF 1392
Query: 131 GQAANEKSTYAWYPSPV 147
GQ N K+ W P+ +
Sbjct: 1393 GQIGNGKTEDMWLPTKI 1409
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALDGIFIKDVACGGVHTCALTSKG 58
D++T+G GQLG L + +P R+ V + G I +A G H+ G
Sbjct: 1159 DLFTFGWNDSGQLG---LGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNG 1215
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+Y+WG GQLG G +S P + D + PI+ + +CGH HT+
Sbjct: 1216 DIYSWGANSKGQLGHGNIEKSLR--PKQIDE-LKGKPIIKI-------SCGHFHTVAISE 1265
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
++ WG + N + P +++ + ++ K+ G H+A +T A
Sbjct: 1266 LNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAA 1318
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ WG GQ C L +GD E PR + +L + VACG +H+ ALT G ++A
Sbjct: 109 VLGWGRNDRGQ---CGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFA 165
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG+G R+ + + +PI + +ACG H+ G +
Sbjct: 166 WGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPI-------RRLACGGWHSFALSVSGAV 218
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRL 181
GWG N+ GQ + P+P+ + +V+ +A G ++A+LT + L F
Sbjct: 219 FGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGG---LFLFGQ 275
Query: 182 AESVTLSNASEIEDVASRT-----GSEALARLCERLREHLLHG 219
L + S +V R+ GSE C R +L G
Sbjct: 276 GSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEG 318
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 82/213 (38%), Gaps = 47/213 (22%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ +++WG GQLG L L PR V AL G I++++CG HTC L G +
Sbjct: 1 MSVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVM 60
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP------ILVVPNG------------- 102
G GQLG + +P + + V G
Sbjct: 61 MCGANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQC 120
Query: 103 -----------------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ---AANE 136
V VACG H++ RDG+I WG NS+GQ A
Sbjct: 121 GLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPG 180
Query: 137 KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
++ Y +P + G +R+LA GG HS L+
Sbjct: 181 RTLYRDHPQQLSSLPGVPIRRLACGGWHSFALS 213
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAW 63
++ +G GS GQLGH S E+ PR V G I VACG HT L + G Y+
Sbjct: 456 LFLFGQGSEGQLGH---GSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSL 512
Query: 64 GGCQAGQLGL 73
G GQLGL
Sbjct: 513 GQGSKGQLGL 522
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAW 63
++ +G GS GQLGH S E+ PR V G I VACG HT L + G ++
Sbjct: 270 LFLFGQGSEGQLGH---GSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSL 326
Query: 64 GGCQAGQLGL 73
G GQLGL
Sbjct: 327 GQGSKGQLGL 336
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG S GQLG+ ++GD +P RV + +K ++ G + AL G +YAWG
Sbjct: 153 VYSWGDNSYGQLGNN--RTGDSRTVPDRVQGMP--KVKQISAGCDFSLALLENGKVYAWG 208
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G R+ S +P + + + N V++ A G H L D +
Sbjct: 209 RGIHGQLGTG--NRATSSVPRQ---------VQGLENIVEIDA-GCYHALALTADDTVKS 256
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WGYN YGQ N + + P VDW G V + AG H+ V T
Sbjct: 257 WGYNLYGQLGNSSTKSSTLPVDVDWIEG-VSDIEAGAFHNYVKT 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 80/201 (39%), Gaps = 30/201 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G GQLG + + +PR+V L+ I D C H ALT+ + +WG
Sbjct: 204 VYAWGRGIHGQLGTGNRATSS---VPRQVQGLENIVEIDAGC--YHALALTADDTVKSWG 258
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
GQLG S T +P+ V GV + G H V D +
Sbjct: 259 YNLYGQLG-------------NSSTKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVW 305
Query: 124 GWGYNSYGQA--------ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT--DACSL 173
GWG N YGQ AN T P + G V+ LAAG H +T D +
Sbjct: 306 GWGNNQYGQLLESDEAFDANVSRTNRTAPVEIPRLEG-VQHLAAGARHGVAVTADDVFTW 364
Query: 174 KELCEFRLAESVTLSNASEIE 194
E +L T++ ++
Sbjct: 365 GHNGEGQLGNGTTVARYESVK 385
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTC-----ALTSKGA 59
+ +WG G GQLG+ +L L P V +L + ++ GG + A T K
Sbjct: 47 VLSWGAGRTGQLGNGTLS---DSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDK-T 102
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ +WG +GQLG G N + T +P L ++ VA G H L
Sbjct: 103 VKSWGHNSSGQLGNG---------GNTNQTVPTTVPRLT---DIKDVAAGGKHALALDTS 150
Query: 120 GKIHGWGYNSYGQAANEKS 138
G+++ WG NSYGQ N ++
Sbjct: 151 GQVYSWGDNSYGQLGNNRT 169
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-- 117
+ +WG + GQLG G T S S P+ + FR + Q+ A G S +
Sbjct: 47 VLSWGAGRTGQLGNG--TLSDSLSPSSVTSLFRG-------DVDQMSAGGTSSADSFALA 97
Query: 118 -RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
D + WG+NS GQ N +T P+ V +++ +AAGG H+ L
Sbjct: 98 RTDKTVKSWGHNSSGQLGNGGNTNQTVPTTVPRLT-DIKDVAAGGKHALAL 147
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + +KE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----EKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG+ PN D N P+ L G+ L +ACG +H+ + +
Sbjct: 167 WGSNIYGQLGVNS--------PN--DLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G + GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS 320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L PR++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G QLG T+ IP D I +CG H+L G++
Sbjct: 65 GSNDYSQLGHDLPTKRPQLIPELQDYVIIQI------------SCGSRHSLALSDWGQVL 112
Query: 124 GWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ A EK P V V + V ++A G HS LT
Sbjct: 113 SWGDNDCGQLGHATEKEI-VQLPKVVRQLVSKTVVQIACGNNHSLALT 159
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+ S LY WG GQLGLG I +E R IP VQ VACGH HT
Sbjct: 1 MASGKELYCWGSTSHGQLGLGG-------IEDEQILTPRQIP-WTPDTAVQQVACGHRHT 52
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
L GK++ G N Y Q ++ T P D+ + ++ + G HS L+D
Sbjct: 53 LFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQI---SCGSRHSLALSD 107
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG G G+LG +L D + P + D +K +ACGG HT LT G +YA G
Sbjct: 84 VWGNGDFGRLGLGNL---DSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLN 140
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG+ + R FS P E + +P ++ G++H+ V DG+++ WG
Sbjct: 141 NFGQLGISDEKR-FSTEPVE----------VRIPKEAMHISAGYNHSCVVTADGELYMWG 189
Query: 127 YNSYGQ-AANEKSTYAWY-PSPVDWCVGEVRKLAA-GGGHSAVLTD 169
NS GQ +KS A + P+ VD G V K AA G HS + D
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD 235
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG+ S GQLG +S LP +V +LDGI IK A G H+ A+ G +++W
Sbjct: 184 ELYMWGVNSNGQLG-LGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSW 242
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G ++G+LG G ++ F+ + S+ R I L G+++ VA G H+ +G
Sbjct: 243 GDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKEL---EGIKVKHVAAGMLHSACVDENGA 299
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
++ +G + + + ++ A PS + + + ++A GG H+ VLT L
Sbjct: 300 VYIFGERATNRVSFGEANKATTPSLISTLL-DCEEVACGGYHTCVLTKGGDL 350
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 19 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
S +K P + L + ++VACGG HTC LT G LY+WG + G LG G +
Sbjct: 311 VSFGEANKATTPSLISTL--LDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG--ST 366
Query: 79 SFSFIPNESDTYFRNIPI 96
S S +P + F P+
Sbjct: 367 SVSHLPERVEGPFSKSPV 384
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG S GQ G+ + S + +P R+ G + +A H+ ALTS G + AWG
Sbjct: 57 ILAWGDNSFGQFGNGTTAS-SRTPVPVRLPV--GTTVTAIAGSDTHSLALTSVGTVLAWG 113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG G S + +P L V V +A G SH+L G +
Sbjct: 114 GNSFGQLGDGTTASSRTPVPVR----------LPVGTTVTAIAAGTSHSLAITATGAVFA 163
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
WG N+ GQ + +T + P PV VG V +A G GHS
Sbjct: 164 WGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHS 204
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG +VGQLG + LP V G + +A G H+ A+ S GA AWG
Sbjct: 161 VFAWGDNAVGQLGDGTTT---DSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S + I +P L V VA G H+L G ++
Sbjct: 218 SNAFGQLGDGTTTGSSTPI---------TVPQLPT---VTAVAAGDVHSLALTSTGTVYA 265
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHS 164
WG NS+GQ + ++ + P V G + +G HS
Sbjct: 266 WGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADHS 306
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 92/245 (37%), Gaps = 57/245 (23%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG + GQLG + P V L + VA G VH+ ALTS G +YAWG
Sbjct: 216 WGSNAFGQLGDGTTTGSST---PITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANS 270
Query: 68 AGQLGLG-------------PQTRSFSFIPNESD-------------------------- 88
GQLG G P + + + + +D
Sbjct: 271 FGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGA 330
Query: 89 TYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
T + P+ V VP G L VA H + W N+ GQ N +T + P
Sbjct: 331 TVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPV 390
Query: 146 PVDWCVGE-VRKLAAGGGHSAVLTDACSLKELCEFRLA-------ESVTLSNASEIEDVA 197
V G + +A G HS L DA + R++ + VTL+ A+ D+A
Sbjct: 391 AVSLPAGTAITAVAVGDDHSLALVDAQA-TSTTTLRISPPDPTVDQEVTLT-ATVSCDIA 448
Query: 198 SRTGS 202
+ TGS
Sbjct: 449 APTGS 453
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ AWG GQ G G S + +P L V V +A +H+L
Sbjct: 57 ILAWGDNSFGQFGNGTTASSRTPVPVR----------LPVGTTVTAIAGSDTHSLALTSV 106
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG NS+GQ + + + P PV VG V +AAG HS +T
Sbjct: 107 GTVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G S GQLGH ++G+ P V ALD I V+CG H+ A+ +G ++ WG
Sbjct: 54 VYTCGSNSCGQLGHD--KAGNS---PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWG 108
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQLGL ++T R IP L+ + + V CG+ H + RDG+
Sbjct: 109 AGDGGQLGL-----------ETAETAVR-IPRLLKKLCDHSISQVVCGNQHCIALSRDGQ 156
Query: 122 IHGWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG NS GQ K T PSPV G + ++ AGG H L+
Sbjct: 157 LFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALS 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG S GQLG L G+ +L P V +L GI + + GG H AL+ GA++ W
Sbjct: 157 LFTWGQNSSGQLG---LGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGW 213
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G +AGQLGL +D R +P + V ++CG HT + G
Sbjct: 214 GKNKAGQLGL-------------NDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSG 260
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G S GQ + S P V +G EV ++ G H+
Sbjct: 261 GLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHT 305
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G GQLG + ++ + +PR + L I V CG H AL+ G L+ WG
Sbjct: 104 VFVWGAGDGGQLGLETAETAVR--IPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWG 161
Query: 65 GCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
+GQLGLG +T S P +S IP+ Q+ A G H G +
Sbjct: 162 QNSSGQLGLGKGETSKLSPSPVKS---LAGIPL------AQITAGG-DHCFALSLSGAVF 211
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
GWG N GQ N+K A P + + + V ++ G H+A LT +
Sbjct: 212 GWGKNKAGQLGLNDKQDRA-VPCHIKFLRSQRVVYISCGDEHTAALTKS 259
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S + ELLPRRV+ L G + + CG HT A S G +YA+
Sbjct: 262 LFTFGDGSRGQLGH---GSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAF 318
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 319 GCNSHGQLGTG 329
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG + GQLG+G + F P + G++ VACG HTL ++D
Sbjct: 1 MLCWGNARDGQLGIGVEGNPV-FEPRICHVF--------SGRGLKEVACGGQHTLFLLQD 51
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G NS GQ ++K+
Sbjct: 52 GSVYTCGSNSCGQLGHDKA 70
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PRRV L + +ACG + A+ G +Y
Sbjct: 177 EVFAWGYNNSGQVGSGSTVN---QPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYV 233
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 284 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 230 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 287 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 336
Query: 123 HGWG 126
+ WG
Sbjct: 337 YMWG 340
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 124
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 125 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCL 207
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 283 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 338 MWGQCR-GQSVILPHLTHFS 356
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + DKE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----DKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG+ P+ + P R +L +P + +ACG +H+ + + G
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYP------LRLTTLLGIP--LAAIACGGNHSFLISKSGA 218
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
+ GWG N+ GQ YP+ + VR +A G S LT+
Sbjct: 219 VFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQ-TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL + R++ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDEANRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS 320
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P ++ ++ VACG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G QLG T+ IP D V ++CG H+L G++
Sbjct: 65 GSNDHSQLGHELPTKRPLLIPELQDYV------------VIQISCGSRHSLALSEWGQVL 112
Query: 124 GWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ A +K P V V + V ++A G HS LT
Sbjct: 113 SWGDNDCGQLGHATDKEI-VQLPKVVRQLVSKTVVQIACGNNHSLALT 159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ S LY WG GQLGLG Q + S IP DT VQ VACG
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT------------AVQQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H HTL +GK++ G N + Q +E T P D+ V ++ + G HS L
Sbjct: 49 HRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQDYVVIQI---SCGSRHSLAL 105
Query: 168 TD 169
++
Sbjct: 106 SE 107
>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
anophagefferens]
Length = 369
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 84/184 (45%), Gaps = 31/184 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LGH S L R AL G+ VACG +T A++++GALY W
Sbjct: 20 EVYTWGRGGFGRLGHGDAHSLKAPRLVRG--ALVGVVCAQVACGFAYTAAVSAQGALYTW 77
Query: 64 GGCQAGQLGLGPQT----RSFSFIPNESDTY----FRNIPILVVPNGVQLVACGHSHTLV 115
G + G+LGLG T + P D + R I V G HT+
Sbjct: 78 GAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREIS----------VGPGGYHTVA 127
Query: 116 YMRDGKIHGWGYNSYGQAA----------NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ ++ WG+N GQ E + + P VD G VR++ AG GH+
Sbjct: 128 LVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHT 187
Query: 165 AVLT 168
A+LT
Sbjct: 188 ALLT 191
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 4 DIYTWGLGSVGQLGHCS----LQSGDKELL---PRRVVALDGIFIKDVACGGVHTCALTS 56
D+YTWG VGQLG+ + ++G+ PRRV ++ G+ ++ V G HT LT+
Sbjct: 133 DVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTA 192
Query: 57 KGALYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+GA Y G GQLGLG P++ + + FR + L V +ACG H++
Sbjct: 193 EGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKR-VAQIACGGEHSVA 251
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
DG++H G + GQ + +P V
Sbjct: 252 LTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVV 283
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 5 IYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACG--GVHTCALTSKGA 59
+YTWG G G+LG + + L PR + A G +++++ G G HT AL S
Sbjct: 74 LYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVGPGGYHTVALVSPAD 133
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVY 116
+Y WG + GQLG T + N +F P V V+ V G HT +
Sbjct: 134 VYTWGHNRVGQLGY---TNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALL 190
Query: 117 MRDGKIHGWGYNSYGQAA---------NEKSTYAWYPSPVDWCV------GEVRKLAAGG 161
+G + G N GQ NE+ +P D+ + V ++A GG
Sbjct: 191 TAEGAAYVCGRNFQGQLGLGDPESFPHNERG----HPYQPDFRLLDRLGAKRVAQIACGG 246
Query: 162 GHSAVLTD 169
HS LT+
Sbjct: 247 EHSVALTE 254
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 70/182 (38%), Gaps = 41/182 (22%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ V CGG H LT+ G +Y WG G+LG G D + P LV
Sbjct: 2 VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHG-------------DAHSLKAPRLVRG 48
Query: 101 NGVQL----VACGHSHTLVYMRDGKIHGWG-----------YNSYGQAANEKSTYAWYPS 145
V + VACG ++T G ++ WG Y +G AA+ P
Sbjct: 49 ALVGVVCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAAD-----VLTPR 103
Query: 146 PVDWCVGE-VRKLAAGGG--HSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGS 202
P+D G VR+++ G G H+ L + R+ + +N DV R G
Sbjct: 104 PLDAFGGRAVREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTNN-----DVVPRNGE 158
Query: 203 EA 204
A
Sbjct: 159 GA 160
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++WG + GQLGH D +++ PR + ++ + ++CG H ALT+ G L
Sbjct: 110 LFSWGSNATGQLGH------DLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGEL 163
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+AWG + GQLGLG + +P + IPI +ACG +H+ +
Sbjct: 164 FAWGANEYGQLGLGTTGKK---VPTATLVKSLAGIPI-------AFIACGGNHSFAVSKS 213
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G I GWG N++GQ YP+ + VR ++ G S LT
Sbjct: 214 GAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLT 263
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLGH + +K P+ + AL+ + V+CG H+ ALT+ G L++WG
Sbjct: 57 LYTCGNNDHGQLGHDTNNLPNKR--PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG S+ P R I + VQ ++CGHSH L G++
Sbjct: 115 SNATGQLGHDLDMVSYP-AP-------RMIKSIATKTVVQ-ISCGHSHCLALTNSGELFA 165
Query: 125 WGYNSYGQ 132
WG N YGQ
Sbjct: 166 WGANEYGQ 173
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y WG G+LG ++ ++ + PR + ++ ACGG HT LT G LY
Sbjct: 1 MALYCWGSTVHGELGLGGIEE-EQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYT 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG +PN+ + + +V V+CG SH+L G++
Sbjct: 60 CGNNDHGQLGHDTNN-----LPNKRPQFISALENYIVTQ----VSCGLSHSLALTNWGQL 110
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP---VDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG N+ GQ ++ + YP+P V +++ G H LT++ L
Sbjct: 111 FSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALTNSGEL 163
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + +G K V +L GI I +ACGG H+ A++ GA++ W
Sbjct: 162 ELFAWGANEYGQLGLGT--TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R + P + T R++ GV+ ++CG ++ ++G +
Sbjct: 220 GKNTFGQLGLNDLDSRCY---PTQLKT-LRSL-------GVRYISCGDDFSVFLTQEGGV 268
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + P V +G ++ ++A G H+
Sbjct: 269 FTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHT 311
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
++T GLG+ GQLGH + E+LPR V L G I +ACG HT A S+G +Y
Sbjct: 268 VFTCGLGTFGQLGHG---THGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG + GQLG L D P ++ L + ++ ++CG + LT +G ++ G
Sbjct: 216 IFGWGKNTFGQLG---LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCG 272
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GKIH 123
GQLG G T +P + ++ + + +ACG HTL ++ GK++
Sbjct: 273 LGTFGQLGHG--THGNEILP--------RMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PRRV L + +ACG + A+ G +Y
Sbjct: 198 EVFAWGYNNSGQVGSGSTVN---QPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYV 254
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 255 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 304
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 305 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 341
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 251 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 307
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 308 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 357
Query: 123 HGWG 126
+ WG
Sbjct: 358 YMWG 361
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K +AC G H T++G
Sbjct: 92 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTEGE 145
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 146 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 196
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 197 GEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCL 228
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +
Sbjct: 303 QVYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 357
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 358 YMWGQCR-GQSVILPHLTHFS 377
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG S E PR V L + +ACG H ALT+ G LY+WG
Sbjct: 132 LFSWGSNTEGQLGLNS--KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWG 189
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG + + P + + F IPI +ACG H++ + G + G
Sbjct: 190 SNSEGQLGLGTDIK-YEIKP-KFISAFIGIPI-------AFIACGGYHSIAISKSGAVFG 240
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 241 WGKNTFGQ 248
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+ G GQLGH + G K L + + LD K ACG HT A+ G L++W
Sbjct: 81 EIYSCGNNDYGQLGH---EKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDG 120
G GQLGL S + + P +V G +V ACG H +G
Sbjct: 136 GSNTEGQLGLN------------SKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNG 183
Query: 121 KIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+++ WG NS GQ Y P + +G + +A GG HS ++ +
Sbjct: 184 ELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS 235
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 21/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG S GQLG L + K E+ P+ + A GI I +ACGG H+ A++ GA++
Sbjct: 184 ELYSWGSNSEGQLG---LGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFG 240
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRD 119
WG GQLGL +DT RN+P + + N + ACG ++ D
Sbjct: 241 WGKNTFGQLGL-------------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + G YGQ + ++ P V +G V +++ G H+ L +
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS 339
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G+LG ++ + L+PR + I+ +ACG +T +T G +Y+
Sbjct: 27 DMFCWGSTIHGELGLGGIED-ENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSC 85
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + IP F+ ACG HTL G++
Sbjct: 86 GNNDYGQLGHEKGRKRLQLIPGLDAFVFKK------------AACGAYHTLAINEWGQLF 133
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG N+ GQ N K+ P V V ++A G H+ LT+
Sbjct: 134 SWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN 181
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH S E+LPR+V+ L G + ++CG HT AL S+G +YAW
Sbjct: 290 VFTCGAGMYGQLGHGS---NSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 346
Query: 64 GGCQAGQLGLGPQTRSFS 81
G AGQLG TRS +
Sbjct: 347 GLGGAGQLG-NHSTRSVT 363
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
L K ++ WG G+LGLG IP E D F+ +Q +ACG ++T
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELD--FKK------AAEIQQIACGENYT 73
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTD 169
+V + G+I+ G N YGQ +EK P +D V +K A G H+ + +
Sbjct: 74 VVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFV--FKKAACGAYHTLAINE 128
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + ++ P+++ AL GI I V+CG H+ AL+ G +++WG
Sbjct: 118 VFAWGAGSEGQLGIGEFK--ERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWG 175
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + S S R++ G+ L VA G +H+ G
Sbjct: 176 KNSHGQLGLGKEVPS-----QTSPQRVRSL------EGIPLAQVAAGGAHSFALSLSGTS 224
Query: 123 HGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A K+ Y P+ VG ++ L + G H+AVLT
Sbjct: 225 FGWGSNSAGQLALSGTKAPVQRY-KPLS--VGALKTLGVVYISCGSEHTAVLTQ 275
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P ++ A + + + V+CG H+ A+ KG ++AWG GQLG+G + + SF P
Sbjct: 88 PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKERSFTP----- 141
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY-PSPVD 148
+ I L +Q V+CG+ H+L DG++ WG NS+GQ K + P V
Sbjct: 142 --QKIKALAGIKIIQ-VSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVR 198
Query: 149 WCVG-EVRKLAAGGGHSAVLT 168
G + ++AAGG HS L+
Sbjct: 199 SLEGIPLAQVAAGGAHSFALS 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG +S D P + ALD + +ACGG HT LT G ++ +
Sbjct: 967 NVYSWGKNDFGQLGLGHTESKDS---PSLLRALDSQKVDFLACGGSHTALLTQDGLVFTF 1023
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD- 119
G + GQLG S T P LV N V +ACG HTL Y+ +
Sbjct: 1024 GAGKYGQLG-------------HSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSEL 1070
Query: 120 GKIHGWGYNSYGQAAN 135
GK+ +G GQ N
Sbjct: 1071 GKVFAFGSGKNGQLGN 1086
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 914 ELFAWGQNSHGQLGLGRIFPSSPT--PQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG T S +S + R + V +ACG SHT + +DG +
Sbjct: 972 GKNDFGQLGLG-HTES-----KDSPSLLRALD----SQKVDFLACGGSHTALLTQDGLVF 1021
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+G YGQ + + P V +G V ++A G H+
Sbjct: 1022 TFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHT 1063
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQL ++ + P V AL + + ++CG HT LT GA+Y +G
Sbjct: 225 FGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGA 284
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIHG 124
+GQLG + R + + V + CG HTL Y+ G++
Sbjct: 285 NSSGQLGHSAEQRGPQCVER-------------IDGLVSQIDCGSYHTLAYVYTTGQVVS 331
Query: 125 WGYNSYGQAANEKSTYA 141
+G +G + ST++
Sbjct: 332 FG---HGPSCTSNSTHS 345
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDT-YFRNIPILVVPNGVQLVACGHSHTLVY 116
G L+AWG GQLGLG R F P + +P++ ++ G +H++
Sbjct: 913 GELFAWGQNSHGQLGLG---RIFPSSPTPQIVEHLAGVPLVQ-------ISAGEAHSMAL 962
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ WG N +GQ + PS + + V LA GG H+A+LT
Sbjct: 963 SMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQ 1016
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G S GQLGH + Q G P+ V +DG+ + + CG HT A Y +
Sbjct: 279 VYTFGANSSGQLGHSAEQRG-----PQCVERIDGL-VSQIDCGSYHTLA-------YVYT 325
Query: 65 GCQAGQLGLGPQTRSFS 81
Q G GP S S
Sbjct: 326 TGQVVSFGHGPSCTSNS 342
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 5 IYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+YTWG S GQLG CS S P+ V +L + + V+ GG H+ AL+ G++
Sbjct: 143 VYTWGQNSRGQLGLGKEGCSSISS-----PQCVRSLSSMPVVQVSAGGDHSFALSVSGSV 197
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYM 117
+ WG GQLGLG DT R P LV ++ ACG HT V
Sbjct: 198 FGWGRNDCGQLGLG-------------DTTDRETPTLVHYLNMKKTVFAACGKDHTAVLT 244
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
DG + +G YGQ + A P V G +V K+A G H+ VLTD
Sbjct: 245 MDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTD 297
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G G GQLGH S ++ L PR V L G + +ACG HT LT +Y++G
Sbjct: 249 VFTFGSGHYGQLGHNSFRNA---LCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFG 305
Query: 65 GCQAGQLGLGPQT 77
+ GQLG +T
Sbjct: 306 CNEHGQLGPREET 318
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++T GLG G+LGH GD+E LP V AL+ + I +ACG HT +TS G LY
Sbjct: 166 SLFTCGLGLNGRLGH-----GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLY 220
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LGLG TR +P RN V VA G H+ DG+
Sbjct: 221 TWGGAAFGKLGLG-STRGSQLLPKHVSGPLRN-------KAVVSVALGSQHSACVTTDGE 272
Query: 122 IHGWG 126
++ WG
Sbjct: 273 LYTWG 277
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G +LGH +Q E+LPRRV AL G+F+ V CG HT + G ++AW
Sbjct: 272 ELYTWGQGR--RLGH-EVQGESDEILPRRVEALLGLFVIHVVCGDAHTACIVENGNVWAW 328
Query: 64 G 64
G
Sbjct: 329 G 329
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG S GQLG +GD+ +PR V AL G +K VAC HT G+ Y
Sbjct: 33 ELYMWGANSEGQLG-----TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAY 87
Query: 62 AWGGCQAGQLGL 73
AWG G+LGL
Sbjct: 88 AWGCALNGRLGL 99
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR V AL I + V+ GG+ + G LY WG GQLG G D
Sbjct: 4 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTG-------------DR 50
Query: 90 YFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWG 126
++P LV V+ VAC HT+ + DG + WG
Sbjct: 51 RDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWG 90
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG K+ P+ + +L GI VA GG H+ LT GA++ W
Sbjct: 18 EVFCWGQNKYGQLGLGI--DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 75
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D YF N+ + + + CG HT ++G +
Sbjct: 76 GRNKFGQLGLN----------DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVF 125
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 126 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 173
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VACG H+ AL+ ++ WG + GQLGLG + S ++ +L +P
Sbjct: 3 VACGYYHSLALSKASEVFCWGQNKYGQLGLG-----IDYKKQASPQLIKS--LLGIP--F 53
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGG 162
VA G +H+ V G I GWG N +GQ ++P+ + ++ + G
Sbjct: 54 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGED 113
Query: 163 HSAVLT 168
H+A LT
Sbjct: 114 HTAALT 119
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 124 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 180
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 181 GLGGNGQLGTG 191
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++++G G+ G+LGH + PR + L G I VA G +H+ A+ S+GALY W
Sbjct: 211 ELFSFGCGTFGRLGHGNELP---SFNPRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTW 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGLG T +PN++ R + VV CG +HTLV +G ++
Sbjct: 268 GWNRYGQLGLG--TVKKHTLPNKNKELERFNIVKVV--------CGKNHTLVLDVNGHVY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLT 168
+G+N GQ T + P+ +D + E+ +AAG H +LT
Sbjct: 318 SFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLT 365
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GQLG L + K LP + L+ I V CG HT L G +Y++G
Sbjct: 264 LYTWGWNRYGQLG---LGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G T S PN D + ++ +A G+ H L+ + G ++
Sbjct: 321 FNVCGQLGIGSYTDSIK--PNRIDLDLKQNDEIID------IAAGYYHVLLLTKKGCVYS 372
Query: 125 WGYNSYG 131
+GY S G
Sbjct: 373 FGYISDG 379
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 38 GIFIKDVACGGVHTCA-LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
G+ + +ACG H A L + + +WG + GQLGLG Q P ++IP+
Sbjct: 137 GLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCH--PTPISGLSQSIPV 194
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 155
V A G H+ V + G++ +G ++G+ + ++ P P+ VG+ +
Sbjct: 195 FV--------AAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIV 246
Query: 156 KLAAGGGHSAVLTDACSL 173
+AAG HSA + +L
Sbjct: 247 SVAAGLMHSAAVDSQGAL 264
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 48/231 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD---GIFIKDVACGGVHTCALTSKGALY 61
+Y++G GQLG + S + P R+ LD I D+A G H LT KG +Y
Sbjct: 316 VYSFGFNVCGQLG---IGSYTDSIKPNRI-DLDLKQNDEIIDIAAGYYHVLLLTKKGCVY 371
Query: 62 AWGGCQAGQLGLG--------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
++G G LGLG P+ FS +E + S+
Sbjct: 372 SFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSI------------------DSYK 413
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVR-KLAAGGGHSAVLTDA 170
+Y YNS + + P V+ +G+V K+AAGG HSA++T
Sbjct: 414 EIYGE--------YNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIIT-- 463
Query: 171 CSLKELCEFRLAESVTL-SNASEIEDVASRTGSEALARLCERLREHLLHGD 220
S L F L ++ L +N E +D+ E E ++L D
Sbjct: 464 -SSGRLYTFGLGDNFRLGNNCQEDQDMPCIVNKEIWGVTKETTDLNILQND 513
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G S GQLGH + G + P V ALD I V+CG H+ A+ +G ++AWG
Sbjct: 55 VYTCGSNSCGQLGHD--KGGSR---PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
GQLGLG + +P L+ + + V CG+ H + +DG+
Sbjct: 110 AGDGGQLGLGTAEEAV------------RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQ 157
Query: 122 IHGWGYNSYGQ---AANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLT 168
+ WG NS GQ E ST + P P+ C + +++AGG HS L+
Sbjct: 158 LFVWGENSSGQLGLGKGEPSTLS--PQPLKSLCGIPLTQISAGGDHSFALS 206
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG S GQLG L G+ L P+ + +L GI + ++ GG H+ AL+ GA++
Sbjct: 157 QLFVWGENSSGQLG---LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFG 213
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRD 119
WG AGQLGL +E D R +P + V ++CG HT ++
Sbjct: 214 WGKNSAGQLGLN----------DEQD---RAVPCHIKFLRSQKVVYISCGEEHTAALTKE 260
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G + +G S GQ ++ + P V +G EV ++A G H+ + L
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL 315
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S E LPRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 LFTFGNGSKGQLGH---DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIP 84
G GQLG G + + S +P
Sbjct: 320 GCNTQGQLGTGIRGSAKSPVP 340
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG AGQLG+G S F P + G++ VACG+ H+L + D
Sbjct: 2 MLCWGSSGAGQLGIGASEASV-FEPRSCCVF--------DGRGLKEVACGNQHSLFLLHD 52
Query: 120 GKIHGWGYNSYGQAANEK 137
G ++ G NS GQ ++K
Sbjct: 53 GSVYTCGSNSCGQLGHDK 70
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ ACG++HTLV +G++
Sbjct: 229 WGYSGNGQLGLGGSGNQPTPCRVAALQGIR----------VQRAACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG NSYGQ + YP+P+
Sbjct: 279 YVWGANSYGQLGTGNKSNQPYPTPI 303
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + P RV AL GI ++ ACG HT LT +G +Y W
Sbjct: 225 EVYVWGYSGNGQLG---LGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L G K VAC G H TS+G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLTG---KKVACLSYGSGPHVVLATSEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKRVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
G++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-L 60
+Y WG S GQLG +G+K + P ++ I+ AC HT A ++G +
Sbjct: 277 QVYVWGANSYGQLG-----TGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ + P FS
Sbjct: 332 YMWGQCR-GQSVVLPHLTHFS 351
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG + GQLG L + + P+ V + G+ I VA G H LT GAL+AWG
Sbjct: 169 IYTWGSNNHGQLG---LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWG 225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQLG+G D R P LV G+ +ACG H+L RDG
Sbjct: 226 CNSFGQLGVG-------------DDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGG 272
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G YGQ + S P V +G V ++A G HS
Sbjct: 273 VFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHS 316
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG QLG + S + PR V L + VACG HT LT+ G +Y WG
Sbjct: 115 VFTWGSNEDNQLGRGQVDSASTSI-PRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWG 173
Query: 65 GCQAGQLGLGPQTRSFSFIPNESD--TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLGL +T NE + +PI+ VA G H LV G +
Sbjct: 174 SNNHGQLGLANKTPQ-----NEPQWVSCISGLPIV-------RVAAGADHNLVLTISGAL 221
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS+GQ P+ V + + LA G HS LT
Sbjct: 222 FAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALT 268
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
K ++ WG GQLGLG +P E + F N+ ++ +ACG HTL
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRS-FCNVEVV-------HIACGLQHTLFV 59
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG--HSAVLTDA 170
+DG++ G N YGQ +EK P+ +D +GE L A G HS VLTDA
Sbjct: 60 KKDGRVLSCGNNDYGQLGHEKPCKR--PALID-SLGERNVLQASSGTKHSTVLTDA 112
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA-LTSKGALYAW 63
++T+G G GQLGH + + ELLPR+V L G + +ACG H+ A + S G +Y +
Sbjct: 273 VFTFGAGMYGQLGH---NTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVF 329
Query: 64 GGCQAGQLGLGPQTRSFS 81
G GQLG G S
Sbjct: 330 GLGGNGQLGTGSTVNRMS 347
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 44/212 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG L+ + LPR + + + + +ACG HT + G + + G
Sbjct: 11 VLCWGSLTHGQLGLGGLEE-ETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCG 69
Query: 65 GCQAGQLG-------------LGPQT------------------RSFSFIPNESDTYFR- 92
GQLG LG + + F++ NE + R
Sbjct: 70 NNDYGQLGHEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG 129
Query: 93 -------NIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
+IP +V + V VACG +HT+ G+I+ WG N++GQ T
Sbjct: 130 QVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQN 189
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
P V G + ++AAG H+ VLT + +L
Sbjct: 190 EPQWVSCISGLPIVRVAAGADHNLVLTISGAL 221
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG S GQLG GD + P V L I +ACG H+ ALT G ++
Sbjct: 221 LFAWGCNSFGQLG-----VGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFT 275
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGK 121
+G GQLG T + +P + ++ + V +ACG H++ Y+ G+
Sbjct: 276 FGAGMYGQLG--HNTSNNELLPRKV--------FELMGSSVTQIACGRKHSIAYVPSSGR 325
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV 147
++ +G GQ + P+ V
Sbjct: 326 VYVFGLGGNGQLGTGSTVNRMSPAMV 351
>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Harpegnathos saltator]
Length = 1665
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH + D++ +P V +L G+ + ++ G HT AL+ G +YA+G
Sbjct: 713 VFTWGWGVHGQLGH---GNTDEKSIPTLVTSLLGVVVCHISAGYAHTLALSVDGFVYAFG 769
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+G +S +IP+ V +P G++L++ G+ H LV K++
Sbjct: 770 CNVLGQLGVGSNNKS-------------SIPMKVSLPEGIKLISTGYFHNLVVSNTNKLY 816
Query: 124 GWG 126
WG
Sbjct: 817 TWG 819
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 30/177 (16%)
Query: 5 IYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
IY WG GQLG LQ EL V +L I D G H+ ALT+ G ++ W
Sbjct: 661 IYVWGASQFGQLGLGKVLQCSSPEL----VTSLAQEIIVDAVAGQYHSVALTADGRVFTW 716
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC----GHSHTLVYMRD 119
G GQLG G +T ++IP LV + + +V C G++HTL D
Sbjct: 717 GWGVHGQLGHG-------------NTDEKSIPTLVT-SLLGVVVCHISAGYAHTLALSVD 762
Query: 120 GKIHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
G ++ +G N GQ +N KS+ P V G ++ ++ G H+ V+++ L
Sbjct: 763 GFVYAFGCNVLGQLGVGSNNKSS---IPMKVSLPEG-IKLISTGYFHNLVVSNTNKL 815
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 18/124 (14%)
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV-- 106
V C +T+ G +Y WG Q GQLGLG + S P LV +++
Sbjct: 651 VQGCLVTNNG-IYVWGASQFGQLGLGKVLQCSS-------------PELVTSLAQEIIVD 696
Query: 107 -ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHS 164
G H++ DG++ WG+ +GQ + + P+ V +G V ++AG H+
Sbjct: 697 AVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAHT 756
Query: 165 AVLT 168
L+
Sbjct: 757 LALS 760
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GS GQLGH + + D +PR + L+ I V+CG H AL + G + W
Sbjct: 105 QLFSWGAGSDGQLGHTTTE--DSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTW 162
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G + GQLGLG + F S +++ G+ L VA G +H+ G
Sbjct: 163 GQNRHGQLGLGKE-----FPSQASPQRVKSL------EGIPLAQVAAGGAHSFALSLSGA 211
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GWG N+ GQ T P V +V ++ G H+AVLT +
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 158 QFFTWGQNRHGQLGLG--KEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL +T +S + + L+ V ++CG HT V + G +
Sbjct: 216 GRNNAGQLGLSDETD------RQSPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 265
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S+GQ ++ P V +G EV ++A G H+ + L
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 316
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 55 EVYTCGLNTKGQLGHE--REGNK---PEQIGALADQHIIHVACGESHSLALSDQGQLFSW 109
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G GQLG S + IP L+ Q+ V+CG+ H + DG
Sbjct: 110 GAGSDGQLGHTTTEDSVA------------IPRLIKKLNQQMILQVSCGNWHCMALAADG 157
Query: 121 KIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N +GQ K + P V G + ++AAGG HS L+
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 264 VFTFGAGSFGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 321 GCGARGQLGTG 331
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 12/125 (9%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S+G G S P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNT 63
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 64 KGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDQGQLFSWGA 111
Query: 128 NSYGQ 132
S GQ
Sbjct: 112 GSDGQ 116
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 22/131 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+I+TWG G G+LGH G++E L PRR+ AL+GI VACG +T A+T+ G LY
Sbjct: 291 EIFTWGRGGFGRLGH-----GNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELY 345
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG + G+LGLG D R+ P V + + V+ V G H+ V R+
Sbjct: 346 TWGAGENGRLGLG-------------DVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTRE 392
Query: 120 GKIHGWGYNSY 130
G ++ +G + Y
Sbjct: 393 GTVYAFGKHEY 403
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVACGGVHTCALTS 56
+Y WG V QLG + + + + P+ V +L G+ I V G H+ ALT
Sbjct: 449 QVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTV 508
Query: 57 KGALYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSH 112
G LY G GQLGLG PQ F NE F+ L+ ++ +ACG H
Sbjct: 509 DGQLYVCGRNYQGQLGLGSPQ----GFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEH 564
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLTD 169
++ +G++ +G GQ +E +T +P V E+ +A G + VL
Sbjct: 565 SVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVLAG 624
Query: 170 ACSLKELCEFRLAESVTLSNASEIEDVAS 198
+ L F + SV N EDV S
Sbjct: 625 GVAFPTL--FEMTASVVRGNPRLWEDVES 651
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 24 GDKE--LLPRRVVALDG---IFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQ 76
GD E L PR + G ++ ++ G G HT ALT +G +YAWG + QLG+G
Sbjct: 407 GDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIG-- 464
Query: 77 TRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ- 132
SF+ N YF P LV V + V G H+ DG+++ G N GQ
Sbjct: 465 -NSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQL 523
Query: 133 --------AANEKSTYAWYPSPVDWCVGE------VRKLAAGGGHSAVLTD 169
NE+ +P D+C+ + ++++A GG HS + +
Sbjct: 524 GLGSPQGFPQNERG----HPFQADFCLIDRLQHLKIKQIACGGEHSVAVAE 570
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 24 GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI 83
G ++ P V L G+ ++ V CGG H LT G ++ WG G+LG G R
Sbjct: 256 GWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHG--NREGLES 313
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
P + IP + VACG ++T G+++ WG G+
Sbjct: 314 PRRIEA-LEGIPCV-------QVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHT 365
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVLT 168
PS V+ +V+++ AG HS VLT
Sbjct: 366 PSRVEGLHSKVKEVYAGSVHSCVLT 390
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GS GQLGH + + D +PR + L+ I V+CG H AL + G + W
Sbjct: 105 QLFSWGAGSDGQLGHTTTE--DSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTW 162
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G + GQLGLG + F S +++ G+ L VA G +H+ G
Sbjct: 163 GQNRHGQLGLGKE-----FPSQASPQRVKSL------EGIPLAQVAAGGAHSFALSLSGA 211
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GWG N+ GQ T P V +V ++ G H+AVLT +
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 158 QFFTWGQNRHGQLGLG--KEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL +T +S + + L+ V ++CG HT V + G +
Sbjct: 216 GRNNAGQLGLSDETD------RQSPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 265
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S+GQ ++ P V +G EV ++A G H+ + L
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 316
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 55 EVYTCGSNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDQGQLFSW 109
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G GQLG S + IP L+ Q+ V+CG+ H + DG
Sbjct: 110 GAGSDGQLGHTTTEDSVA------------IPRLIKKLNQQMILQVSCGNWHCMALAADG 157
Query: 121 KIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N +GQ K + P V G + ++AAGG HS L+
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 264 VFTFGAGSFGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 321 GCGARGQLGTG 331
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 12/125 (9%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S+G G S P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNT 63
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 64 KGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDQGQLFSWGA 111
Query: 128 NSYGQ 132
S GQ
Sbjct: 112 GSDGQ 116
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYA 62
+++TWG GQLGH L G + P+R+ G I V CGG H+ + S +Y+
Sbjct: 1238 ELFTWGKNQSGQLGH-GLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYS 1296
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRD 119
WG + GQLG G T+S S +N P + + +Q +A G +HT+V +
Sbjct: 1297 WGQDKFGQLGHG--TKSVS----------QNRPKIIEDISGQKIQAIAAGFAHTIVLKKS 1344
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--------GEVRKLAAGGGHSAVLTD 169
G+++ +GY GQ + P+ ++ G++ ++A G GHS + +D
Sbjct: 1345 GELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSD 1402
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GQLGH + P+ + + G I+ +A G HT L G LY++G
Sbjct: 1294 VYSWGQDKFGQLGHGTKSVSQNR--PKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFG 1351
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGK 121
GQLG G SF+ T I+ + +G + +ACG H+++ +G+
Sbjct: 1352 YGDQGQLGHG------SFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGE 1405
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRL 181
++ WG GQ + P ++ G V K++ G ++ TD LK + + L
Sbjct: 1406 VYSWGLGKQGQLGHGNYESIARPRLIEALKG-VTKISCGHFYTMATTD---LKNVYSWGL 1461
Query: 182 AESVTLSNASEIEDVASR 199
E + L + S+ + R
Sbjct: 1462 GEHMKLGHGSDKNEATPR 1479
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-------VALDGIFIKDVACGGVHTCALTS 56
++Y++G G GQLGH S S + +P R+ + G I +ACG H+ +
Sbjct: 1346 ELYSFGYGDQGQLGHGSFVS---KSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSD 1402
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G +Y+WG + GQLG G ES R I L GV ++CGH +T+
Sbjct: 1403 NGEVYSWGLGKQGQLGHGNY---------ESIARPRLIEAL---KGVTKISCGHFYTMAT 1450
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG + + + P VD+ + + V K+ G H+ LT
Sbjct: 1451 TDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+CG H ++ G L+ WG Q+GQLG G P + + PI+
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPII------ 1276
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGG 161
+V CG H++ D ++ WG + +GQ + KS P ++ G+ ++ +AAG
Sbjct: 1277 -MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGF 1335
Query: 162 GHSAVLTDACSL 173
H+ VL + L
Sbjct: 1336 AHTIVLKKSGEL 1347
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WGLG GQLGH + +S + PR + AL G + ++CG +T A T +Y+W
Sbjct: 1405 EVYSWGLGKQGQLGHGNYESIAR---PRLIEALKG--VTKISCGHFYTMATTDLKNVYSW 1459
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + +LG G + P D + + V + CG +HT+ G ++
Sbjct: 1460 GLGEHMKLGHGSDKNEAT--PRVVDFF--------IQKNVSKIVCGLNHTITLTYPGDLN 1509
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 69/199 (34%), Gaps = 71/199 (35%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL--- 60
++Y+WGLG +LGH S E PR V + + CG HT LT G L
Sbjct: 1455 NVYSWGLGEHMKLGH---GSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNN 1511
Query: 61 --------------------------------------------------YAWGGCQAGQ 70
YA G + G+
Sbjct: 1512 SLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGK 1571
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-----VACGHSHTLVYMRDGKIHGW 125
LGLG +S P F + PI GV ++CG T + +G ++ W
Sbjct: 1572 LGLGGDLKS----P------FFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVW 1621
Query: 126 GYNSYGQAANEKSTYAWYP 144
GY ++GQ N K+ AW P
Sbjct: 1622 GYGNFGQIGNGKTDDAWVP 1640
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+TWG S GQLG C Q+ P+RV +LDGI + VA GG H+ AL+ GA+
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG +GQLGL + ES + + L+ V ++CG HT V + G
Sbjct: 212 FGWGKNSSGQLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++YT GL + GQLGH C G K P ++ AL G I VACG H+ AL+ +G L++
Sbjct: 54 EVYTCGLNTKGQLGHDCE---GSK---PEQIGALAGQHIVHVACGESHSLALSDQGQLFS 107
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGL ++ T R I L +Q V+CG+ H L DG+
Sbjct: 108 WGAGSDGQLGLT--------TIEDAVTVPRLIKKLNQQTILQ-VSCGNWHCLALAADGQF 158
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NSYGQ K + P V G + ++AAGG HS L+
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + G + LP RV +LD + +A G H+ AL S G ++AWG
Sbjct: 58 VWAWGDNTYGQLGDGT---GITQRLPVRVQSLDSVVA--LAVGYQHSLALRSDGTVWAWG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G +S +PI V NGV +A G H+L + DG +
Sbjct: 113 DNFFGQLGDGSDAQS-------------QVPIQVWSLNGVVAIAAGDHHSLALLSDGSVW 159
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD 169
WGYN++GQ ++ + + P V G V L+AG HS AVL+D
Sbjct: 160 AWGYNAHGQLGDDTTVASPLPVQVQGLSGVV-ALSAGSTHSLAVLSD 205
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG S + P V +L G+ K V G H+ AL S G + AWG
Sbjct: 208 VKAWGDNYYGQLGDGS---STERWTPVLVSSLTGV--KSVVAGTFHSLALCSDGTVRAWG 262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
+GQLG+ TR R +P+ VVP VQ +A G +H+L DG +
Sbjct: 263 ENGSGQLGISSTTR-------------RPVPV-VVPGLTNVQALAAGSAHSLALRSDGTV 308
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N +GQ N + P V VG ++ +AAGG HS +
Sbjct: 309 RAWGNNDHGQVGNGTISQQLTPVQVP-GVGRMKSIAAGGAHSLAM 352
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S + +P +V +L+G+ +A G H+ AL S G+++AWG
Sbjct: 108 VWAWGDNFFGQLGDGSDA---QSQVPIQVWSLNGVVA--IAAGDHHSLALLSDGSVWAWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T +P+ V +GV ++ G +H+L + DGK+
Sbjct: 163 YNAHGQLG-------------DDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSDGKVK 209
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCE 178
WG N YGQ + ST W P V G V+ + AG HS L +++ E
Sbjct: 210 AWGDNYYGQLGDGSSTERWTPVLVSSLTG-VKSVVAGTFHSLALCSDGTVRAWGE 263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG +GQLG + + P + AL G+ +A G H+ AL + G +AWG
Sbjct: 608 VWAWGYNGMGQLGDGTTT---PRVTPTQAPALSGVVA--LAAGDSHSLALRADGVAWAWG 662
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGKI 122
G GQLG ++ T R+ P VP +VA G++H+LV DG
Sbjct: 663 GNDQGQLG-------------DATTLERSTPA-AVPGLAHVVALAAGNAHSLVLHADGTS 708
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHS-AVLTDAC 171
WG N+YGQ + ST +P PV G ++ +AAGG HS AV +D
Sbjct: 709 SSWGNNAYGQLGDGTSTL--HPVPVQ-VPGPSAMKGVAAGGSHSLAVRSDGT 757
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG + G + P +V L V+ G H+ A+ S G ++AWG
Sbjct: 758 VWAWGNNGSGELGDGT---GLQRPRPVQVQGLGSAVA--VSAGTNHSLAVQSDGTVWAWG 812
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + R +P+ V NGV V+ G +H+L DG +
Sbjct: 813 GNSQGQLG-------------DGTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVW 859
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WGYN YGQ + ST P V G V +AAG HS AV +D
Sbjct: 860 AWGYNFYGQLGDATSTQRLVPIQVPGLTGVV-SIAAGTHHSLAVRSDGT 907
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + L+P +V L G+ +A G H+ A+ S G ++AWG
Sbjct: 858 VWAWGYNFYGQLGDAT---STQRLVPIQVPGLTGVV--SIAAGTHHSLAVRSDGTVWAWG 912
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G T + P + VP G+ VA G H+L +G +
Sbjct: 913 YNFYGQLGDG--------------TKIQRSPPVQVPGLAGMVSVAAGTYHSLAVHSNGTV 958
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
WGYN++GQ + +T P P+ G + A
Sbjct: 959 WAWGYNNHGQLGDGTTTQRLLPVPISSSSGVIAAAA 994
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG + S L P +V L + VA G H+ AL + G ++AWG
Sbjct: 508 VWAWGFNGSGRLGDGTTLS---RLTPVQVPGLSSMVA--VAAGSTHSLALRADGTVWAWG 562
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG G R S + +P L +GV +A G+ ++L G +
Sbjct: 563 DNSNGALGDGTTLRRLSPV---------QVPGL---SGVVALAAGNGYSLAVDAQGSVWA 610
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN GQ + +T P+ + V LAAG HS L
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAP-ALSGVVALAAGDSHSLAL 652
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D ++ WG+ + GQLG + LP +V L G+ H+ A + G
Sbjct: 402 LHADGTVWAWGVNTAGQLGDGTDL---PRTLPVQVPGLAGVHTLSATTS--HSLAARADG 456
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++AWG GQLG G T+ +P + +P L GV V+ H H+L R
Sbjct: 457 TVWAWGDNAFGQLGDGTTTQRL--LPVQ-------VPGLA---GVDTVSSMHQHSLAVSR 504
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT---DACSLKE 175
DG + WG+N G+ + + P V + + +AAG HS L + +
Sbjct: 505 DGTVWAWGFNGSGRLGDGTTLSRLTPVQVP-GLSSMVAVAAGSTHSLALRADGTVWAWGD 563
Query: 176 LCEFRLAESVTLSNASEIEDVASRTGSEALA 206
L + TL S ++ V +G ALA
Sbjct: 564 NSNGALGDGTTLRRLSPVQ-VPGLSGVVALA 593
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + LLP + + G+ A H+ + + G ++ WG
Sbjct: 958 VWAWGYNNHGQLGDGTTT---QRLLPVPISSSSGVI---AAAANWHSLVVRTDGTVWGWG 1011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
A QLG G + S +P S VPNGV+ ++ G +H+L DG +
Sbjct: 1012 SNNASQLGDG--STSDRKMPTPSS----------VPNGVRSISSGANHSLALRSDGTVWA 1059
Query: 125 WGYNSYGQ 132
WG+ + GQ
Sbjct: 1060 WGFGNSGQ 1067
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQ+G+ ++ ++L P +V + +K +A GG H+ A+ + G +AWG
Sbjct: 308 VRAWGNNDHGQVGNGTI---SQQLTPVQVPGVG--RMKSIAAGGAHSLAMRADGITWAWG 362
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
GQLG G +S R P V+ +++ + G+ H+L DG +
Sbjct: 363 DDSQGQLGDG-----------QSSQQLR--PARVLGQRIRMPLGTGNRHSLALHADGTVW 409
Query: 124 GWGYNSYGQ 132
WG N+ GQ
Sbjct: 410 AWGVNTAGQ 418
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+++GL GQLG + + +LLP RV ++ ACG HT LT +G +++ G
Sbjct: 210 FSFGLNDCGQLG---IGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGK 266
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKI 122
GQLGLG ++ + N+P L+ ++ACG+SHT V + DGK+
Sbjct: 267 NLNGQLGLGSRSST-------------NVPTLIAALQERPASMIACGYSHTCVVLEDGKL 313
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+GYN GQ + P V+ +V K++ G + VL+++
Sbjct: 314 FTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSES 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G GQLG L S +P + AL +ACG HTC + G L+ +G
Sbjct: 261 VFSCGKNLNGQLG---LGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFG 317
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG T S S P + +T RN+ ++ + +CG T V G++
Sbjct: 318 YNHQGQLGLG-HTDSVSS-PMQVET-LRNVKVVKI-------SCGTHFTCVLSESGELWS 367
Query: 125 WGYNSYGQAANEKSTYAWYP 144
+G N +GQ ST P
Sbjct: 368 FGCNCHGQLGLGDSTDRLVP 387
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQ--SGDKELLPRRVVALDGI----FIKDVAC--GGVHTCALT 55
+Y GL S GQL + Q + + + ++G+ + V+C G H +T
Sbjct: 93 KVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVT 152
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
S G +Y+ G GQLGLG S S + ES + R V +C + H++V
Sbjct: 153 SAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVR----------VLSASCSYHHSVV 202
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG-HSAVLTD 169
DG +G N GQ P V+ + +LAA G H+ LT+
Sbjct: 203 VSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTE 257
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++T+G GQLG L D P +V L + + ++CG TC L+ G L+++
Sbjct: 312 KLFTFGYNHQGQLG---LGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSF 368
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSH 112
G GQLGLG D+ R +P+LV + +ACG H
Sbjct: 369 GCNCHGQLGLG-------------DSTDRLVPVLVPSMTKKNLSEIACGFHH 407
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 27/175 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+GS GQLG + + +P+++ AL GI I ++CG H+ AL+ G +++WG
Sbjct: 102 VFAWGVGSDGQLGTGKFE--EICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWG 159
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 160 KNSHGQLGLGQE-----FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGTS 208
Query: 123 HGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLTD 169
GWG NS GQ A N ++ P VG ++ L + G H+AVLT
Sbjct: 209 FGWGNNSAGQLAFSGNNVLVQSYKPR----SVGALKNLGVVYISCGYEHTAVLTQ 259
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG Q + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 154 QVFSWGKNSHGQLGLG--QEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 211
Query: 64 GGCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G AGQL G S+ P S +N+ GV ++CG+ HT V ++ ++
Sbjct: 212 GNNSAGQLAFSGNNVLVQSYKPR-SVGALKNL-------GVVYISCGYEHTAVLTQNDQV 263
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS+GQ + + P V+ G V ++ G H+
Sbjct: 264 FTFGDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGSYHT 305
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ G S GQLG SG + P + AL + + V+CG H+ A+ KG ++AWG
Sbjct: 50 VHACGDNSGGQLGRRGAPSGKQ---PEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWG 106
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + FIP + I L +Q ++CG+ H+L +DG++
Sbjct: 107 VGSDGQLGTG-KFEEICFIP-------QKIKALTGIKIIQ-ISCGYYHSLALSKDGQVFS 157
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ ++ P V G + ++AAGG HS L+
Sbjct: 158 WGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 203
>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
variabilis]
Length = 379
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 15/131 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +TWG+ G LG+ + P +VV L+G+FI DV+ GG H+ A++++G +Y W
Sbjct: 200 ECFTWGINDFGMLGNGTT---SYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVW 256
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G + G+LGLG +T S P + T G ++V +CG +HT+V +G+
Sbjct: 257 GRGEYGRLGLGDRTGSSKLRPQKVKTL----------EGHRVVEGSCGGTHTMVVTDEGR 306
Query: 122 IHGWGYNSYGQ 132
WG ++G+
Sbjct: 307 CFIWGRGAFGR 317
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ TWG + G LGH + K P+RV L G+ IK A GG H AL G +AW
Sbjct: 52 NVITWGWNARGTLGHGHREPQGK---PQRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG + GQ +P + + L V+ VA G H+L G+I
Sbjct: 109 GGNEYGQC-----------LPRDKRDILAPVKCL-EGIAVKQVAAGGMHSLALTETGEIW 156
Query: 124 GWG--YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA--CSLKELCEF 179
WG + + N P +D G+ ++ G H+ L A C + +F
Sbjct: 157 MWGEPWGDFSMTINRA------PRRID-TTGDFVDVSCGAFHNLALNAAGECFTWGINDF 209
Query: 180 RLAESVTLSNASEIEDVASRTG 201
+ + T S A+ E V G
Sbjct: 210 GMLGNGTTSYATCPEKVVGLEG 231
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-----GIFIKDVACGGVHTCALTSKG 58
D++TWGLG GQLGH L+S L P++V+A ++ VACG T ALT G
Sbjct: 299 DLFTWGLGVFGQLGHGKLKSC---LHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDG 355
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVA--------C 108
L+++G + GQLG + + + + L VP V+ +A C
Sbjct: 356 RLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTC 415
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
GH HT+V D ++ WG+ + G + P V GE V ++AG HS V+
Sbjct: 416 GHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQRVPALSGEIVSSISAGEKHSLVV 475
Query: 168 --TDACSL 173
TD +
Sbjct: 476 RSTDTTTF 483
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 27 ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
+L P V ++ + D++ G ++ A+T G ++ WG + GQLGLG R F +P +
Sbjct: 215 QLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLG--DRWFHGLPQQ 272
Query: 87 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
+F N+ I+ V+CG H V G + WG +GQ + K +P
Sbjct: 273 V-KFFTNVHIVS-------VSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKK 324
Query: 147 V------DWCVGEVRKLAAGGGHSAVLT 168
V D +VR++A G + LT
Sbjct: 325 VLAFSEADQLNQKVRQVACGANFTMALT 352
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG GQLG GD+ LP++V + I V+CG H ++ +G L+
Sbjct: 248 VFTWGFNEKGQLG-----LGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFT 302
Query: 63 WGGCQAGQLGLGP------QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GQLG G + +F +E+D + V+ VACG + T+
Sbjct: 303 WGLGVFGQLGHGKLKSCLHPKKVLAF--SEADQ---------LNQKVRQVACGANFTMAL 351
Query: 117 MRDGKIHGWGYNSYGQ-AANEKSTY 140
DG++ +G+ YGQ A E++ Y
Sbjct: 352 TVDGRLWSFGHGEYGQLGATEENQY 376
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ + ++G+ QLGH + L P + L G+ I ACG H+ A+T G +Y+
Sbjct: 1 MSVISFGVNKQSQLGHALEKD---HLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYS 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+G + GQLG P + +T N+ + + VACG+ H+L GKI
Sbjct: 58 FGRGREGQLGH----------PEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKI 107
Query: 123 HGWG 126
+ WG
Sbjct: 108 YEWG 111
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+TWG S GQLG C Q+ P+RV +LDGI + VA GG H+ AL+ GA+
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG +GQLGL + ES + + L+ V ++CG HT V + G
Sbjct: 212 FGWGKNSSGQLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++YT GL + GQLGH C G K P ++ AL G I VACG H+ AL+ +G L++
Sbjct: 54 EVYTCGLNTKGQLGHDCE---GSK---PEQIGALAGQHIVHVACGESHSVALSDQGQLFS 107
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGL ++ T R I L +Q V+CG+ H L DG+
Sbjct: 108 WGAGSDGQLGLT--------TIEDAVTVPRLIKKLNQQTILQ-VSCGNWHCLALAADGQF 158
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NSYGQ K + P V G + ++AAGG HS L+
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+++TWG G G+LGH GD + +PR +L G + V CG HT A+T G LY
Sbjct: 53 EVFTWGRGDDGRLGH-----GDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLY 107
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LG G + + P + +V V +ACG HT + G
Sbjct: 108 TWGGGMYGKLGHGDEAGHAT--PKRVEA--------LVGATVAQIACGSRHTAIVTASGA 157
Query: 122 IHGWGYNSYGQAAN-EKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTDACSLKELCEF 179
++ WG G A + E + + P ++ V +++A G H+A++TDA L E
Sbjct: 158 LYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEG 217
Query: 180 RLAE 183
+
Sbjct: 218 KFGR 221
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLG D+ P V AL G+ ++ +ACG HT LT+ G ++ WG
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDE---PTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG 58
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G + ++P + + I V V CG HT +G ++
Sbjct: 59 RGDDGRLGHGDN--GWKYVPRMTQSLAGQI--------VLQVTCGSYHTAAVTGNGDLYT 108
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG YG+ + P V+ VG V ++A G H+A++T + +L
Sbjct: 109 WGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGAL 158
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G+LGH S ++ P V + G + V+CGG HT ++ G LY +
Sbjct: 210 ELFTWGEGKFGRLGHMSERNCHS---PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTF 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG + GQ LG R P T+ + + V + CG SH++ G ++
Sbjct: 267 GGGEHGQ--LGHNDRVNKMTP----TFVEALDGMFVSQ----ITCGWSHSVALTVKGLVY 316
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
WG +G+ + P V+
Sbjct: 317 TWGNGDHGKLGHGNGRKVAVPQAVE 341
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G GH + + LPR + ++ + ++ G HT +T G L+ WG
Sbjct: 158 LYTWGDKENGVAGHGETEG--HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG +E + + I +V + V+CG HT V DG+++
Sbjct: 216 EGKFGRLGH----------MSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYT 265
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G +GQ + P+ V+ G V ++ G HS LT
Sbjct: 266 FGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALT 310
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
A++ WG + GQLGLG + + TY + + GVQ +ACG HT+V
Sbjct: 1 AVFTWGRGEDGQLGLGDTS------DQDEPTYVDALRGV----GVQQIACGSGHTVVLTT 50
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
DG++ WG G+ + + + + P G+ V ++ G H+A +T
Sbjct: 51 DGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVT 101
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG L + P++V A+ + +A G ++ ALT G++++WG
Sbjct: 1107 LWSWGYNYYGQLG---LGDNYSKTTPQKVNAISNVAA--IAAGEYYSLALTRDGSVWSWG 1161
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLGLG D RN P V V + V +A G H+L RDG +
Sbjct: 1162 DNSDGQLGLG-------------DNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVW 1208
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG NS GQ + + P PV + ++ +AAG HS +++
Sbjct: 1209 SWGRNSRGQLGLDDNDDRNTPQPVT-TISNIKAIAAGNSHSFAISE 1253
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++WG GQLG L + PR+V AL + +A G H+ ALT G+L++WG
Sbjct: 618 FWSWGYNYYGQLG---LGDNVSKTTPRKVNALSNVVA--MAAGDRHSLALTLDGSLWSWG 672
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLGLG D RN P V + V +A G+ H+L RDG +
Sbjct: 673 DNTYGQLGLG-------------DNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVW 719
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N+ GQ + P PV + ++ +A G +S +++
Sbjct: 720 SWGNNTRGQLGLGDNDDRNTPQPVT-TISNIKAIAVGNNYSIAISE 764
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P +V AL +A G H AL G++++WG GQLGLG + ++S
Sbjct: 1024 FTPTKVDAL--PPAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLG-SSGTYS------ 1074
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
T R I + N V +ACG SH+L RDG + WGYN YGQ + P V
Sbjct: 1075 -TKNRPQKINAISN-VAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV 1132
Query: 148 DWCVGEVRKLAAGGGHSAVLT 168
+ + V +AAG +S LT
Sbjct: 1133 N-AISNVAAIAAGEYYSLALT 1152
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG ++ P RV +L + +A G H+ ALTS G L+AWG
Sbjct: 288 VWAWGANGSGQLGFGDFET---PKAPGRVSSL--ADVTAIASGWFHSLALTSDGVLWAWG 342
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG S +P + + + N V A G H+L DG +
Sbjct: 343 NNGDGRLGT--DATSDQSLPAQ---------VSSISNAVSF-AGGQRHSLAIAADGSVWS 390
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N+YGQ E T A +PV
Sbjct: 391 WGGNAYGQLGVESLTPASVLTPV 413
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG L D P+ V + I K +A G ++ A++ +G ++AWG
Sbjct: 718 VWSWGNNTRGQLG---LGDNDDRNTPQPVTTISNI--KAIAVGNNYSIAISEEGLVWAWG 772
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLVYMRDGKI 122
+GQLG+G + + +E N P ++V+ N V L A G SH++ DG +
Sbjct: 773 YNCSGQLGIG----THGSLADE------NTPQKVIVISNVVGLSA-GSSHSIALTEDGAL 821
Query: 123 HGWGYNSYGQAANEKS 138
WG N GQ A E++
Sbjct: 822 WAWGNNEAGQIAAEEA 837
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG L D P+ V + I K +A G H+ A++ +G +AWG
Sbjct: 1207 VWSWGRNSRGQLG---LDDNDDRNTPQPVTTISNI--KAIAAGNSHSFAISEEGLAWAWG 1261
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG+G + NE N P + V+ N V L + G+ H+L DG +
Sbjct: 1262 YNYDGQLGIGTSGS----LANE------NTPQKVKVISNVVGL-SGGNYHSLALTEDGAL 1310
Query: 123 HGWGYNSYGQ 132
WG N GQ
Sbjct: 1311 WAWGDNDDGQ 1320
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
D P V AL +A GG H AL S G++++WG +
Sbjct: 532 DDVFTPTNVDAL--PLAASIAAGGGHALALASDGSVWSWGRNSV--------GQLGLGTG 581
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
T R I + N V +ACG SH+L RDG WGYN YGQ + P
Sbjct: 582 GTYSTENRPQKINAISN-VAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP 640
Query: 145 SPVDWCVGEVRKLAAGGGHSAVLT 168
V+ + V +AAG HS LT
Sbjct: 641 RKVN-ALSNVVAMAAGDRHSLALT 663
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ G GQLG +GD P +V L + K VA G + AL + G ++AW
Sbjct: 187 EVWAMGRNDHGQLGF----TGDHADAPVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAW 240
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G ++ QLG G + + PI V+ N + +A G H + DG +
Sbjct: 241 GNNESAQLGTGIAGEAVA----------TPAPIAVLSN-ITAIAAGRRHAMALAEDGSVW 289
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N GQ P V + +V +A+G HS LT
Sbjct: 290 AWGANGSGQLGFGDFETPKAPGRVS-SLADVTAIASGWFHSLALT 333
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG L L P + + I VA G + + AL S G+L+AWG
Sbjct: 88 VWVWGRNDYNQLG---LGDDINRLAPEQAPVVSNIV--SVAAGRLFSLALASDGSLWAWG 142
Query: 65 GCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG+G S P SD V +A G H L + G++
Sbjct: 143 GNYYGQLGMGDNDNRLTPSKTPGLSD--------------VAAIAGGDYHALAATQSGEV 188
Query: 123 HGWGYNSYGQ 132
G N +GQ
Sbjct: 189 WAMGRNDHGQ 198
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 21/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG + +G+ P + L I +A G H AL G+++AWG
Sbjct: 237 VWAWGNNESAQLG--TGIAGEAVATPAPIAVLSNITA--IAAGRRHAMALAEDGSVWAWG 292
Query: 65 GCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+GQLG G ++ + + +D V +A G H+L DG +
Sbjct: 293 ANGSGQLGFGDFETPKAPGRVSSLAD--------------VTAIASGWFHSLALTSDGVL 338
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N G+ + ++ P+ V + A G HS +
Sbjct: 339 WAWGNNGDGRLGTDATSDQSLPAQVS-SISNAVSFAGGQRHSLAI 382
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VA GG + AL + G+L++WG GQLGLG F P + D +P
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVD---------ALPPAA 1036
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDW-CVGEVRKLAAGG 161
+ +A G +H L DG + WGYNS GQ TY+ P + V +A GG
Sbjct: 1037 K-IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGG 1095
Query: 162 GHSAVLTDACSL 173
HS + SL
Sbjct: 1096 SHSLAVARDGSL 1107
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQLG + S E P++V + + ++ G H+ ALT GAL+AWG
Sbjct: 1258 WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVV--GLSGGNYHSLALTEDGALWAWGD 1315
Query: 66 CQAGQLG 72
GQ+G
Sbjct: 1316 NDDGQIG 1322
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
H+ AL G ++ WG QLGLG + P ++ VV N V VA G
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLA--PEQA---------PVVSNIVS-VAAG 125
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQ 132
+L DG + WG N YGQ
Sbjct: 126 RLFSLALASDGSLWAWGGNYYGQ 148
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+TWG S GQLG C Q+ P+RV +LDGI + VA GG H+ AL+ GA+
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG +GQLGL + ES + + L+ V ++CG HT V + G
Sbjct: 212 FGWGKNSSGQLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH S G K P + AL G I VACG H+ AL+ +G +++W
Sbjct: 54 EVYTCGLNTKGQLGHES--EGSK---PELIGALAGQHIVHVACGESHSVALSDQGQVFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL ++ T R I L +Q ++CG+ H L DG+
Sbjct: 109 GAGSDGQLGLT--------TIEDAVTVPRLIKKLNQQTILQ-ISCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NSYGQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQ G + S + ++P V + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYSSFGQPG---IGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG +ES+ + + + VACG SH++ G++ W
Sbjct: 61 NTKGQLG------------HESEGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSW 108
Query: 126 GYNSYGQ 132
G S GQ
Sbjct: 109 GAGSDGQ 115
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 60 LYAWGGCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
+ WG GQ G+G P+ + + FI + RN V+ VACG +H
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD------RN---------VKEVACGGNH 45
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
++ + DG+++ G N+ GQ +E P + G+ + +A G HS L+D
Sbjct: 46 SVFLLEDGEVYTCGLNTKGQLGHESEGSK--PELIGALAGQHIVHVACGESHSVALSD 101
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G S GQLGH S + P ++ L + +VAC HT +T +G LYA+G
Sbjct: 119 LYTFGFNSRGQLGH---GSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFG 175
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+ +P TYF + P+L VACG HT+V + +G +
Sbjct: 176 RNDLGQLGIDDGMDRHVPVPL---TYFNSRPVLA-------VACGQHHTVVSLTNGGVVA 225
Query: 125 WGYNSYGQAANEKST-YAWYPS----PVDWCVGEVRKLAAGGGHSAVLTD 169
+G N +GQ + Y PS P+D V V LA G H+ L +
Sbjct: 226 FGKNDHGQLGTGYTLDYHASPSLLAAPLDSLV--VPSLACGYYHTIALAE 273
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +G GQLG + + D P + A LD + + +ACG HT AL G++Y++
Sbjct: 223 VVAFGKNDHGQLG--TGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSF 280
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G R P I L + VQ V CG HTLV DGK++
Sbjct: 281 GRNDYGQLGHG--HRHHLSEPTL-------IKALAKTHAVQ-VTCGCYHTLVLSEDGKVY 330
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G N++GQ P + + V K+A+G HS LT
Sbjct: 331 PFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLT 376
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y++G S G+L C + D+ L P + + I DVACG T L G ++ G
Sbjct: 14 YSFGQNSYGEL--CHNDTVDRTL-PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGY 70
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIHG 124
+GQ G+G +R S R +P LV + + A G H R G ++
Sbjct: 71 NDSGQCGIGSTSRVQS---------LRLVPALVTEDIAHIRSANGCEHLTAISRSGALYT 121
Query: 125 WGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLT 168
+G+NS GQ + + P+ + D V ++A H+ V+T
Sbjct: 122 FGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMT 166
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGA 59
H +Y++G GQLGH G + L P + AL V CG HT L+ G
Sbjct: 274 HGSVYSFGRNDYGQLGH-----GHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGK 328
Query: 60 LYAWGGCQAGQLGLG 74
+Y +G GQLGLG
Sbjct: 329 VYPFGRNNHGQLGLG 343
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+TWG S GQLG C Q+ P+RV +LDGI + VA GG H+ AL+ GA+
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG +GQLGL + ES + + L+ V ++CG HT V + G
Sbjct: 212 FGWGKNSSGQLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH S G K P + AL G I VACG H+ AL+ +G +++W
Sbjct: 54 EVYTCGLNTKGQLGHES--EGSK---PEPIGALAGQHIVHVACGESHSVALSDQGQVFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL ++ T R I L +Q ++CG+ H L DG+
Sbjct: 109 GAGSDGQLGLT--------TIEDAVTVPRLIKKLNQQTILQ-ISCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NSYGQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQ G + S + ++P V + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYSSFGQPG---IGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG +ES+ + PI + + VACG SH++ G++
Sbjct: 61 NTKGQLG------------HESEGS-KPEPIGALAGQHIVHVACGESHSVALSDQGQVFS 107
Query: 125 WGYNSYGQ 132
WG S GQ
Sbjct: 108 WGAGSDGQ 115
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 60 LYAWGGCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
+ WG GQ G+G P+ + + FI + RN V+ VACG +H
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHD------RN---------VKEVACGGNH 45
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
++ + DG+++ G N+ GQ +E P P+ G+ + +A G HS L+D
Sbjct: 46 SVFLLEDGEVYTCGLNTKGQLGHESEGSK--PEPIGALAGQHIVHVACGESHSVALSD 101
>gi|348506010|ref|XP_003440553.1| PREDICTED: RCC1 domain-containing protein 1-like [Oreochromis
niloticus]
Length = 396
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WGLGS GQLGH L S ++ PR V AL G+ + VA GG H+ ++ G LY WG
Sbjct: 188 VYSWGLGSHGQLGHGVLTSEEE---PRVVEALWGMSMTRVATGGWHSACISDGGDLYVWG 244
Query: 65 GCQAGQLGL------------------------GPQTRSFSFIPNESDTY--FRNIPIL- 97
++GQLGL P D + + P L
Sbjct: 245 WNESGQLGLPSRGLRKSQQKSSQQTGELCYDTSTPADEKLKEEEEHEDVFISIQAFPALL 304
Query: 98 -VVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
V P+ +Q V+CG HT G ++ WG+ YGQ ++ T + P V++ E
Sbjct: 305 DVSPSCEIQTVSCGSRHTAAVTTTGDLYTWGWGEYGQLGHQTVTSSDEPQRVEFFRAEQM 364
Query: 156 KL 157
++
Sbjct: 365 RV 366
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSK 57
D+YTWG G GQLGH ++ S D+ P+RV + + + DV CG +T A K
Sbjct: 330 DLYTWGWGEYGQLGHQTVTSSDE---PQRVEFFRAEQMRVLDVVCGTWNTFAAAVK 382
>gi|340721977|ref|XP_003399389.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 2
[Bombus terrestris]
Length = 506
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG S G+LG+CS ++P V L+ FI D+ACG H+ ALT++G +YAW
Sbjct: 74 VYSWGHNSHGELGNCS----TNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAW 129
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMRD 119
G GQ+G +S N P+ V V ++CG S ++
Sbjct: 130 GENTCGQVG-------------KSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDT 176
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLTDACSL 173
GK++GWG N GQ Y + VD C + K+ G H L++ +L
Sbjct: 177 GKVYGWGCNDVGQLG-----IGNYVNQVDPCEVTTLIEKIVCGYAHVLALSNKGAL 227
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG VGQLG + + ++ P V L I+ + CG H AL++KGALY WG
Sbjct: 179 VYGWGCNDVGQLG---IGNYVNQVDPCEVTTL----IEKIVCGYAHVLALSNKGALYVWG 231
Query: 65 GCQAGQLGLGPQ 76
G GQLGLG +
Sbjct: 232 GNNYGQLGLGMK 243
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH-SH 112
+T +YA G +G LG G +F Y + + L N ++ A G H
Sbjct: 15 ITRDKIVYALGSNTSGCLGTGDACNTF---------YPKKVEALCGKN-IKTFAYGKGPH 64
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
L +GK++ WG+NS+G+ N ST P PV + + + +A G HS LT+
Sbjct: 65 VLALTEEGKVYSWGHNSHGELGN-CSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTN 122
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G+LG + + + + P RV L +FI + CG H ALT +G LYAW
Sbjct: 179 DLYGWGYNGNGELG---IGNNNNQHNPVRVSNLHKVFITQIVCGFAHCLALTDQGELYAW 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM-RD 119
G GQLG G +T S P++V P V++ AC SH M D
Sbjct: 236 GANSYGQLGTGYKTHHLS-------------PVIVAPELGKAVEIAACHLSHISAAMFHD 282
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEF 179
GKI WG+ S ++ P+P + ++ A +V + +
Sbjct: 283 GKIFMWGH------CRGHSIFSPSPTPYT----HLDEVFACYSTPSVTWRTLQFRARQDT 332
Query: 180 RLAESVTLS-NASEIEDVASRTGS------EALARL-CERLREHLLHGDEFDCDDDT 228
LAE++ L+ N D+ + G +A+ R+ C+ R H + D +T
Sbjct: 333 PLAETLRLAFNDENTGDICFKVGGNSIWVHKAILRIRCQYYRAMFQHNTWAEADQET 389
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++YTWG + QLG+ + + L P V L G + V CG H ALTS+G ++A
Sbjct: 73 ELYTWGYNTYSQLGN---GNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSEGEVFA 129
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ G G T + +P R + + + V +ACG ++ + DG +
Sbjct: 130 WGQNNGGQCGSG--TTTGQSVP-------RRVTSGIGGHKVVAIACGQLTSMALLDDGDL 180
Query: 123 HGWGYNSYGQ 132
+GWGYN G+
Sbjct: 181 YGWGYNGNGE 190
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ C + + +PRRV + + G + +ACG + + AL G LY
Sbjct: 126 EVFAWGQNNGGQ---CGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYG 182
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG+G + N+ + + + CG +H L G++
Sbjct: 183 WGYNGNGELGIGNNNN------QHNPVRVSNLHKVFITQ----IVCGFAHCLALTDQGEL 232
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ T+ P V +G+ ++AA
Sbjct: 233 YAWGANSYGQLGTGYKTHHLSPVIVAPELGKAVEIAA 269
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
D+Y G S G LG L L PR++ +L IK +A G G+H A + G LY
Sbjct: 20 DVYAMGCNSSGCLG---LGDTASALQPRKIESLCKKKIKGLAYGSGLHLLAFSDSGELYT 76
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G + + P+ + ++ V V CG+ H L +G++
Sbjct: 77 WGYNTYSQLGNGNTNHTLT--PSL-------VSGVLAGKTVIQVGCGNHHCLALTSEGEV 127
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLTD 169
WG N+ GQ + +T P V +G +V +A G S L D
Sbjct: 128 FAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLD 176
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG + GQLGH D +++ PR + ++ + ++CG H ALT+ G
Sbjct: 109 QLFSWGSNATGQLGH------DLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGE 162
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMR 118
L+AWG + GQLGLG + +P + IPI +ACG +H+ +
Sbjct: 163 LFAWGANEYGQLGLGTTGKK---VPTATLVKSLAGIPI-------AFIACGGNHSFAVSK 212
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G I GWG N++GQ YP+ + VR ++ G S LT
Sbjct: 213 SGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLGH + +K P+ + AL+ + V+CG H+ ALT+ G L++WG
Sbjct: 57 LYTCGNNDHGQLGHDTNNLPNKR--PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG S+ P R I + VQ ++CGHSH L G++
Sbjct: 115 SNATGQLGHDLDMVSYP-AP-------RMIKSIATKTVVQ-ISCGHSHCLALTNSGELFA 165
Query: 125 WGYNSYGQ 132
WG N YGQ
Sbjct: 166 WGANEYGQ 173
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y WG G+LG ++ ++ + PR + ++ ACGG HT LT G LY
Sbjct: 1 MALYCWGSTVHGELGLGGIEE-EQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYT 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG + +PN+ + + +V V+CG SH+L G++
Sbjct: 60 CGNNDHGQLG-----HDTNNLPNKRPQFISALENYIVTQ----VSCGLSHSLALTNWGQL 110
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP---VDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG N+ GQ ++ + YP+P V +++ G H LT++ L
Sbjct: 111 FSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALTNSGEL 163
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + +G K V +L GI I +ACGG H+ A++ GA++ W
Sbjct: 162 ELFAWGANEYGQLGLGT--TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R + P + T R++ GV+ ++CG ++ ++G +
Sbjct: 220 GKNTFGQLGLNDLDSRCY---PTQLKT-LRSL-------GVRYISCGDDFSVFLTQEGGV 268
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + P V +G ++ ++A G H+
Sbjct: 269 FTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHT 311
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
++T GLG+ GQLGH + E+LPR V L G I +ACG HT A S+G +Y
Sbjct: 268 VFTCGLGTFGQLGH---GTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG + GQLG L D P ++ L + ++ ++CG + LT +G ++ G
Sbjct: 216 IFGWGKNTFGQLG---LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCG 272
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GKIH 123
GQLG G T +P + ++ + + +ACG HTL ++ GK++
Sbjct: 273 LGTFGQLGHG--THGNEILP--------RMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G+ G+LGH Q + P V +L G I VA G +H+ + S G +Y+W
Sbjct: 213 ELYTFGCGTTGRLGHGDEQ---PKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSW 269
Query: 64 GGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPI------LVVPNGVQLVACGHSHTLVY 116
G + GQLG G ++++ P + +I L+ N +++V CG +HTL
Sbjct: 270 GWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVV-CGKNHTLAL 328
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
G++ G+G+N+ GQ N YP +++ V +A+G HS LTD
Sbjct: 329 SSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFNE-HVIDIASGYYHSLCLTD 380
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y+WG+ GQLGH + ++ L + + I VACG H+ +++ G L
Sbjct: 155 VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y +G G+LG G + F P S +V + VA G H+ +G
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSS----------LVGKSIVSVAAGVMHSSCVDSNG 264
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSP 146
KI+ WG+N YGQ N P+P
Sbjct: 265 KIYSWGWNRYGQLGNGSVKSQTLPTP 290
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG-ALYAW 63
+Y WG GQ G + Q+ + I IK +ACG H+ A+ + +Y+W
Sbjct: 99 VYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVYSW 158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG----------VQLVACGHSHT 113
G + GQLG G Q RN P L+ G +VACG H+
Sbjct: 159 GVNRWGQLGHGDQLN-------------RNQPTLLSNIGSGSGSGNSISFSMVACGSQHS 205
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
++ G+++ +G + G+ + + P+PV VG+ + +AAG HS+
Sbjct: 206 MIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSS 258
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 29/142 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGI-------------FIKDVACGGVH 50
IY+WG GQLG+ S++S P+ + L I FIK V CG H
Sbjct: 266 IYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIK-VVCGKNH 324
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACG 109
T AL+S G + +G GQLG G N D + P+ + N V +A G
Sbjct: 325 TLALSSSGEVVGFGFNACGQLGNG----------NHMDQLY---PVKIEFNEHVIDIASG 371
Query: 110 HSHTLVYMRDGKIHGWGYNSYG 131
+ H+L +G+ + WGY S G
Sbjct: 372 YYHSLCLTDNGEAYSWGYMSDG 393
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ +G + GQLG+ + +L P ++ + + D+A G H+ LT G Y+W
Sbjct: 333 EVVGFGFNACGQLGNGNHMD---QLYPVKIEFNEHVI--DIASGYYHSLCLTDNGEAYSW 387
Query: 64 GGCQAGQLGLG 74
G G LGLG
Sbjct: 388 GYMSDGSLGLG 398
>gi|326680004|ref|XP_003201430.1| PREDICTED: RCC1 domain-containing protein 1-like [Danio rerio]
Length = 409
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS GQLGH L S + P+ V AL G+ IK VA G H+ A++S G LY WG
Sbjct: 207 LYSWGSGSHGQLGHGVLTSLED---PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWG 263
Query: 65 GCQAGQLGLGP------------------------QTRSFSFIPNESDTYFRNIPILVVP 100
++GQLGL ++R+ FI ++ +I +
Sbjct: 264 WNESGQLGLPSRGLEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANM--- 320
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ + ++CG HT G ++ WG+ YGQ + P+PVD+
Sbjct: 321 SEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDY 369
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I ++CG HT A+TS G LY WG Q GQLG G + + P + YF + +
Sbjct: 323 ISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVD---YFSSHSL---- 375
Query: 101 NGVQLVACGHSHTLV 115
V+ V CG +T V
Sbjct: 376 -SVKDVVCGSWNTFV 389
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+ G H LT+ G LY+WG GQLG G T S ++ +PI
Sbjct: 191 LVLGSEHALLLTADGTLYSWGSGSHGQLGHGVLT---SLEDPQAVEALWGVPI------- 240
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ VA G+ H+ G ++ WG+N GQ
Sbjct: 241 KAVAAGNWHSAAVSSGGDLYMWGWNESGQ 269
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT 51
D+YTWG G GQLGH + S D E P + + +KDV CG +T
Sbjct: 341 DLYTWGWGQYGQLGHGTEHSTD-EPTPVDYFSSHSLSVKDVVCGSWNT 387
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG S G+LG+CS ++P V L+ FI D+ACG H+ ALT++G +YAW
Sbjct: 98 VYSWGHNSHGELGNCS----TNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAW 153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMRD 119
G GQ+G +S N P+ V V ++CG S ++
Sbjct: 154 GENTCGQVG-------------KSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDT 200
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDACSL 173
GK++GWG N GQ P V V V +K+ G H L++ +L
Sbjct: 201 GKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGAL 255
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG VGQLG + + ++ P V L + IK + CG H AL++KGALY WG
Sbjct: 203 VYGWGCNDVGQLG---IGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWG 259
Query: 65 GCQAGQLGLGPQ 76
G GQLGLG +
Sbjct: 260 GNNYGQLGLGMK 271
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH-SH 112
+T +YA G +G LG G +F Y + + L N ++ A G H
Sbjct: 39 ITRDKIVYALGSNTSGCLGTGDACNTF---------YPKKVEALCGKN-IKTFAYGKGPH 88
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
L +GK++ WG+NS+G+ N ST P PV + + + +A G HS LT+
Sbjct: 89 VLALTEEGKVYSWGHNSHGELGN-CSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTN 146
>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
Length = 388
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS GQLGH L S + P+ V AL G+ IK VA G H+ A++S G LY WG
Sbjct: 186 LYSWGSGSHGQLGHGVLTSLED---PQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWG 242
Query: 65 GCQAGQLGLGP------------------------QTRSFSFIPNESDTYFRNIPILVVP 100
++GQLGL ++R+ FI ++ +I +
Sbjct: 243 WNESGQLGLPSRGLEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANM--- 299
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ + ++CG HT G ++ WG+ YGQ + P+PVD+
Sbjct: 300 SEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDY 348
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I ++CG HT A+TS G LY WG Q GQLG G + + P + YF + +
Sbjct: 302 ISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVD---YFSSHSL---- 354
Query: 101 NGVQLVACGHSHTLVYM 117
V+ V CG +T V +
Sbjct: 355 -SVKDVVCGSWNTFVSV 370
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
G H LT+ G LY+WG GQLG G T S ++ +PI + V
Sbjct: 173 GSEHALLLTADGTLYSWGSGSHGQLGHGVLT---SLEDPQAVEALWGVPI-------KAV 222
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
A G+ H+ G ++ WG+N GQ
Sbjct: 223 AAGNWHSAAVSSGGDLYMWGWNESGQ 248
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT 51
D+YTWG G GQLGH + S D E P + + +KDV CG +T
Sbjct: 320 DLYTWGWGQYGQLGHGTEHSTD-EPTPVDYFSSHSLSVKDVVCGSWNT 366
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
+VVALD I V+CG HT AL KG +YAWG GQLGL P T +P
Sbjct: 25 EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVP------ 77
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTYAWYPSP 146
RNI L VQ V+CG+ H+L + ++ WG N YGQ +K T P
Sbjct: 78 -RNIKSLSDIQIVQ-VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQT---SPQL 132
Query: 147 VDWCVG-EVRKLAAGGGHSAVLT 168
+ +G ++AAGG HS VLT
Sbjct: 133 IKSLLGIPFMQIAAGGAHSFVLT 155
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG K+ P+ + +L GI +A GG H+ LT GA++ W
Sbjct: 106 EVFSWGQNKYGQLGLGF--EFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +E+D Y N+ + + + CG HT ++G +
Sbjct: 164 GRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVF 213
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 214 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 261
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL + GQLG + + +PR + +L I I V+CG H+ AL+ +++WG
Sbjct: 54 VYAWGLDTDGQLGLPGTEECIR--VPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG F F S ++ +L +P +A G +H+ V G I G
Sbjct: 112 QNKYGQLGLG-----FEFKKQTSPQLIKS--LLGIP--FMQIAAGGAHSFVLTLSGAIFG 162
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N +GQ + P+ + + + + G H+A LT
Sbjct: 163 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 207
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 212 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 268
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 269 GLGGNGQLGTG 279
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG GQLG + Q D LP+ V L + +ACG H+ ALTS G LY+WG
Sbjct: 111 VLSWGDNDCGQLGQATDQ--DIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWG 168
Query: 65 GCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+ P+ + S P R +L +P V +ACG +H+ + + +
Sbjct: 169 SNIYGQLGVNTPKEVTHSNQP------VRLTTLLGIP--VAAIACGGNHSFIISKSSAVF 220
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
GWG N+ GQ T YP+ + VR +A G S LT+
Sbjct: 221 GWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG + + P R+ L GI + +ACGG H+ ++ A++ W
Sbjct: 163 ELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T RS+ P + T R + GV+ VACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETSRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + P V +G + ++A G H+ L +
Sbjct: 272 FTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPS 320
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 46/215 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L P +V IK VACG HT LTS G +YA
Sbjct: 6 ELYCWGNTSHGQLGLGGIED-EQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIP--------------------------------------N 85
G QLG T+ IP
Sbjct: 65 GSNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQ 124
Query: 86 ESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA---ANEKST 139
+D +P +V V V +ACG++H+L G+++ WG N YGQ ++ T
Sbjct: 125 ATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVT 184
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ P + +G V +A GG HS +++ + ++
Sbjct: 185 HSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH G E+LPR V+ L G I VACG HT AL S+G +Y +
Sbjct: 271 VFTCGAGAYGQLGHGF---GANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 54 LTSKGALYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+T+ LY WG GQLGLG Q + S +P D+ ++ VACG
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDS------------AIKQVACG 48
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H HTL G+++ G N + Q ++ T P +D+ V ++ A G HS L
Sbjct: 49 HRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQI---ACGSRHSMAL 105
Query: 168 TD 169
++
Sbjct: 106 SE 107
>gi|72391922|ref|XP_846255.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359875|gb|AAX80302.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802791|gb|AAZ12696.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 639
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 16/118 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG+G G+LGH GD + P++VV AL G + DVACG HT ALT +GA+
Sbjct: 402 ELFTWGVGYQGRLGH-----GDNGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAV 456
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
Y WG +GQ G P T + + + +R + + V GV + +ACG HT+V M
Sbjct: 457 YCWGDNTSGQCGARPTTDTIT-------SPYRVVNLEFVAGGVARAIACGRQHTVVVM 507
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS G+LG + + + + G+ + DVA G ++C L S G +Y +G
Sbjct: 157 LFSWGSGSCGELGTQRFEDCNTPTFVQ--ITPFGVHVVDVALGASYSCVLASDGNVYTFG 214
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--------VACGHSHTLVY 116
GQLGLG T P ++ T ++ VP + + VA G++ +
Sbjct: 215 NGDWGQLGLG-HTPEVEQHPEDTTT------VVTVPQRISMFEREPAVHVAAGYAFAVAL 267
Query: 117 MRDGKIHGWGYNSYGQA 133
D ++ WG N++GQ+
Sbjct: 268 TADHHVYFWGNNNHGQS 284
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 21/183 (11%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG + GQ G HCSL+ ++ P V L+G I+ ++CG T AL + G
Sbjct: 273 VYFWGNNNHGQSGLGPRSFHCSLRKVEE---PTLVTTLEGKHIEQLSCGSFFTLALGTDG 329
Query: 59 ALYAWGGCQAGQLGLGPQTRS----FSFIPN----ESDTYFRNIPILVVPNGVQLVA--C 108
LY+WG LG + R+ S I E T ++ VP +LV
Sbjct: 330 TLYSWGLLDCLGLGSEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIHA 389
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAV 166
G H+ G++ WG G+ + + P V + V +A G H+
Sbjct: 390 GQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVA 449
Query: 167 LTD 169
LTD
Sbjct: 450 LTD 452
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 4 DIYTWGLGSVGQLG--HCSLQSGDKE------LLPRRVVALDGIFIKDVACGGVHTCALT 55
++YT+G G GQLG H E +P+R+ + VA G ALT
Sbjct: 209 NVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALT 268
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ +Y WG GQ GLGP++ S E T + ++ ++CG TL
Sbjct: 269 ADHHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLE----GKHIEQLSCGSFFTLA 324
Query: 116 YMRDGKIHGWG 126
DG ++ WG
Sbjct: 325 LGTDGTLYSWG 335
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+ G H+ A+ + G L+ WG G+LG G ++ R ++ G
Sbjct: 387 IHAGQWHSGAINAAGELFTWGVGYQGRLGHG-----------DNGPVMRPKKVVGALTGR 435
Query: 104 QLV--ACGHSHTLVYMRDGKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEV-RK 156
+V ACG HT+ G ++ WG N+ GQ + T + +++ G V R
Sbjct: 436 HVVDVACGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARA 495
Query: 157 LAAGGGHSAVLTD 169
+A G H+ V+ +
Sbjct: 496 IACGRQHTVVVME 508
>gi|261329865|emb|CBH12848.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 640
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 16/118 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG+G G+LGH GD + P++VV AL G + DVACG HT ALT +GA+
Sbjct: 402 ELFTWGVGYQGRLGH-----GDNGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAV 456
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
Y WG +GQ G P T + + + +R + + V GV + +ACG HT+V M
Sbjct: 457 YCWGDNTSGQCGARPTTDTIT-------SPYRVVNLEFVAGGVARAIACGRQHTVVVM 507
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS G+LG + + + + G+ + DVA G ++C L S G +Y +G
Sbjct: 157 LFSWGSGSCGELGTQRFEDCNTPTFVQ--ITPFGVHVVDVALGASYSCVLASDGNVYTFG 214
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--------VACGHSHTLVY 116
GQLGLG T P ++ T ++ VP + + VA G++ +
Sbjct: 215 NGDWGQLGLG-HTPEVEQHPEDTTT------VVTVPQRISMFEREPAVHVAAGYAFAVAL 267
Query: 117 MRDGKIHGWGYNSYGQA 133
D ++ WG N++GQ+
Sbjct: 268 TADHHVYFWGNNNHGQS 284
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 21/183 (11%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG + GQ G HCSL+ ++ P V L+G I+ ++CG T AL + G
Sbjct: 273 VYFWGNNNHGQSGLGPRSFHCSLRKVEE---PTLVTTLEGKHIEQLSCGSFFTLALGTDG 329
Query: 59 ALYAWGGCQAGQLGLGPQTRS----FSFIPN----ESDTYFRNIPILVVPNGVQLVA--C 108
LY+WG LG + R+ S I E T ++ VP +LV
Sbjct: 330 TLYSWGLLDCLGLGNEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIHA 389
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAV 166
G H+ G++ WG G+ + + P V + V +A G H+
Sbjct: 390 GQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVA 449
Query: 167 LTD 169
LTD
Sbjct: 450 LTD 452
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 4 DIYTWGLGSVGQLG--HCSLQSGDKE------LLPRRVVALDGIFIKDVACGGVHTCALT 55
++YT+G G GQLG H E +P+R+ + VA G ALT
Sbjct: 209 NVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALT 268
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ +Y WG GQ GLGP++ S E T + ++ ++CG TL
Sbjct: 269 ADHHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLE----GKHIEQLSCGSFFTLA 324
Query: 116 YMRDGKIHGWG 126
DG ++ WG
Sbjct: 325 LGTDGTLYSWG 335
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+ G H+ A+ + G L+ WG G+LG G ++ R ++ G
Sbjct: 387 IHAGQWHSGAINAAGELFTWGVGYQGRLGHG-----------DNGPVMRPKKVVGALTGR 435
Query: 104 QLV--ACGHSHTLVYMRDGKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEV-RK 156
+V ACG HT+ G ++ WG N+ GQ + T + +++ G V R
Sbjct: 436 HVVDVACGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARA 495
Query: 157 LAAGGGHSAVLTD 169
+A G H+ V+ +
Sbjct: 496 IACGRQHTVVVME 508
>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
queenslandica]
Length = 2287
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 5 IYTWGLGSVGQLG-----HCSLQS------GDKEL-LPRRVVALDGIFIKDVACGGVHTC 52
++ WG G LG C +++ GDK++ + D I ++CG H+
Sbjct: 1281 MFCWGEAHDGALGLDVKEKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCGVKHSL 1340
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGH 110
AL+S G+LYAWG GQLGL ++ I S IL +P G +V ACG
Sbjct: 1341 ALSSDGSLYAWGDNSEGQLGL----KTLQPICKPS--------ILSLPFGRPVVQAACGD 1388
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
HTL +DG++ WG N+ Q + K + P+ + + V KL G HSA LT
Sbjct: 1389 HHTLALTQDGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALT 1448
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + QLGH S + L P ++ L + + CG H+ ALT G ++ WG
Sbjct: 1400 VFSWGKNTTSQLGHSKGLS--RVLAPTQITHLISTPVVKLICGSNHSAALTVSGGVFLWG 1457
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ Q G G T S+ P ++ R V VACG HT+ ++ G I+
Sbjct: 1458 DNRRAQCGFGHVTTKISY-PTLNEFMGR--------YAVSHVACGTDHTVFQVQSGHIYT 1508
Query: 125 WGYNSYGQAAN-EKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 167
G N YGQ + P+P+ V+++ G H+ +L
Sbjct: 1509 VGSNEYGQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLL 1553
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 31/143 (21%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL-VV 99
+ VACG HT G +Y G + GQLG G + Y R PI+ ++
Sbjct: 1487 VSHVACGTDHTVFQVQSGHIYTVGSNEYGQLGRGAR----------GAVYSRPAPIMQLM 1536
Query: 100 PNGVQLVACGHSHTLVYMR-DGKIHGWGYNSYGQAAN------EKST-----------YA 141
VQ V CG HT + + G + +G GQ N E+S Y
Sbjct: 1537 TVVVQQVVCGRYHTTLLAKYTGDLITFGQGLMGQLGNGTTFSSEQSIPVMGRWSSPKRYL 1596
Query: 142 WYPSPVDWCVGEVRKLAAGGGHS 164
P P + V V+ + AGG H+
Sbjct: 1597 RSPRPANSNV--VKGVFAGGNHT 1617
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
IYT G GQLG + G P ++ L + ++ V CG HT L G L +
Sbjct: 1506 IYTVGSNEYGQLGRGA--RGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGDLITF 1563
Query: 64 GGCQAGQLGLGPQTRSFSFIP-----NESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G GQLG G S IP + Y R+ P N V+ V G +HT
Sbjct: 1564 GQGLMGQLGNGTTFSSEQSIPVMGRWSSPKRYLRS-PRPANSNVVKGVFAGGNHTF 1618
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +WG GQLGH + +KE+ LP+ V L + +ACG H+ ALTS G LY+
Sbjct: 111 VLSWGDNDCGQLGHAT----EKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG+ PN D N P+ L G+ L +ACG +H+ + +
Sbjct: 167 WGSNIYGQLGVNS--------PN--DLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G + GWG N+ GQ T YP+ + VR A G S LT+
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTN 267
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S P R+ L GI + +ACGG H+ ++ GA++ W
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ ACG ++ +G +
Sbjct: 223 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFAACGDEFSVFLTNEGGV 271
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
G +YGQ + S+ P V +G + ++A G H+
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHT 314
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S GQLG ++ ++ L PR++ ++ V+CG HT LT+ G +YA
Sbjct: 6 ELYCWGSTSHGQLGLGGIED-EQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G QLG T+ IP D I +CG H+L G++
Sbjct: 65 GSNDYSQLGHDLPTKRPQLIPELQDYVIIQI------------SCGSRHSLALSDWGQVL 112
Query: 124 GWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ A EK P V V + V ++A G HS LT
Sbjct: 113 SWGDNDCGQLGHATEKEI-VQLPKVVRQLVSKTVVQIACGNNHSLALT 159
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT A S+G +YA+
Sbjct: 271 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAF 327
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 328 GLGSSGQLG 336
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+ S LY WG GQLGLG I +E R IP VQ V+CGH HT
Sbjct: 1 MASGKELYCWGSTSHGQLGLGG-------IEDEQILTPRQIP-WTPDTAVQQVSCGHRHT 52
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
L GK++ G N Y Q ++ T P D+ + ++ + G HS L+D
Sbjct: 53 LFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQI---SCGSRHSLALSD 107
>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
carolinensis]
Length = 266
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G GQLGH L+ + P+ V AL G+ +K+VA GG H+ ++ G LY WG
Sbjct: 67 LFSWGSGRHGQLGHGDLEDRPE---PQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWG 123
Query: 65 GCQAGQLGLGPQTRSFSF-----------------IPNESDTYFRNIPILV-VPNGVQLV 106
++GQLGL + S S P + P L+ +P G + +
Sbjct: 124 WNESGQLGLPSKAASESQGAARDTDGAGDRAQPQGPPGADFISIQAFPALLHLPRGAEAL 183
Query: 107 --ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
CG HT R G+++ WG+ YGQ
Sbjct: 184 KAGCGSRHTAAVTRTGELYTWGWGQYGQ 211
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACG 47
++YTWG G GQLGH S D+ PRRV G+ + DV CG
Sbjct: 200 ELYTWGWGQYGQLGHGDTASSDR---PRRVNHFVERGLSVVDVTCG 242
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 37/98 (37%), Gaps = 27/98 (27%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE------------LLPRRVVALDGIFIK--------- 42
D+Y WG GQLG S + + + P+ D I I+
Sbjct: 118 DLYLWGWNESGQLGLPSKAASESQGAARDTDGAGDRAQPQGPPGADFISIQAFPALLHLP 177
Query: 43 ------DVACGGVHTCALTSKGALYAWGGCQAGQLGLG 74
CG HT A+T G LY WG Q GQLG G
Sbjct: 178 RGAEALKAGCGSRHTAAVTRTGELYTWGWGQYGQLGHG 215
>gi|211926988|dbj|BAG82722.1| hypothetical protein [uncultured bacterium]
Length = 782
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG+ S LP V L + V+ G HTCA T GA+ WG
Sbjct: 72 VQCWGRNSSGQLGNGSTA---DSALPITVPGLSDVVA--VSASGFHTCARTEAGAVLCWG 126
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKI 122
GQLG G S S P+ VV +GV ++ G SHT G +
Sbjct: 127 NNFYGQLGDGTNDDSPS-------------PVAVVGLESGVAAISAGGSHTCALTDGGAV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELC---EF 179
WG NS G + P VD V +++GGGH+ LTDA LK C F
Sbjct: 174 KCWGDNSAGAVGDGTGDDRNSPVDVDGLTSGVAAISSGGGHTCALTDAGGLK--CWGWNF 231
Query: 180 R--LAESVTLSNASEIEDVASRTGSEALAR----LCERLRE 214
R L ++ +S +S ++ TG A++ C L E
Sbjct: 232 RGQLGDNSEISRSSPVDVAGLSTGVTAVSSGAQHTCALLEE 272
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 70/172 (40%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHTCALTSKGALYA 62
I WG + GQLG + D L P V+ + I + G H+CA+T+ G +
Sbjct: 375 IQCWGNNNRGQLGD---NTDDSRLTPVDVLQGGDVLAGISALGAGSTHSCAVTNSGGILC 431
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WGG GQLG G S + + + T +G+ V G HT G +
Sbjct: 432 WGGNDFGQLGDGSTVTSTVAVEHSTLT-----------SGIAAVGAGEDHTCALTDGGGV 480
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
WG NS GQ N K + P V L GG HS VL D ++
Sbjct: 481 KCWGRNSQGQLGNGKLVNSSEPVDALLLSQGVSSLTTGGNHSCVLLDTGGIR 532
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG GQLG+ S + + + V L I +V+ G HTCA+TS GA+ WG
Sbjct: 531 IRCWGANGTGQLGNGSRSA---STVAQSVTGLTSGVI-NVSAGSSHTCAVTSSGAVKCWG 586
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS--HTLVYMRDGKI 122
GQ+G G T FR P+ VV G A HT M DG++
Sbjct: 587 WNFYGQVGDG-------------STDFRTEPVDVVGLGAGAAAVVAGRWHTCAIMDDGRV 633
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLTDA 170
WGYN YGQ + T P+PVD V ++ G H+ LT++
Sbjct: 634 KCWGYNVYGQLGD--GTEDDSPTPVDVVNLPSAVTQVTVGDSHTCALTES 681
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 15/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG GQLG S + + + + I V G HTCALT G + WG
Sbjct: 429 ILCWGGNDFGQLGDGSTVTSTVAVEHSTLTS----GIAAVGAGEDHTCALTDGGGVKCWG 484
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G S + L++ GV + G +H+ V + G I
Sbjct: 485 RNSQGQLGNGKLVNSS-----------EPVDALLLSQGVSSLTTGGNHSCVLLDTGGIRC 533
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
WG N GQ N + + V V ++AG H+ +T + ++K
Sbjct: 534 WGANGTGQLGNGSRSASTVAQSVTGLTSGVINVSAGSSHTCAVTSSGAVK 583
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG S S P V L + V+ G HTCAL +G + WG
Sbjct: 227 WGWNFRGQLGDNSEIS---RSSPVDVAGLS-TGVTAVSSGAQHTCALLEEGGVQCWGRNA 282
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
QLG G T + S +P ++D I G HT + DG I WG+
Sbjct: 283 ENQLGDG--TENGSLVPVDADGTEDAAGIHA----------GGFHTCITNADGGIQCWGW 330
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
N GQ ++ +T A P V V +++ G HS
Sbjct: 331 NEDGQLGDDSTTDAGAPVDVVGLASGVDEVSLGEEHS 367
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + D P VV L + V G HTCALT + WG
Sbjct: 633 VKCWGYNVYGQLGD---GTEDDSPTPVDVVNLPSA-VTQVTVGDSHTCALTESDGILCWG 688
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LG P D F ++ + GV +A G HT + G +
Sbjct: 689 LSSSGRLGGDP------------DPDFA--AVVGLGTGVTQIAGGDDHTCALIG-GNVRC 733
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N + Q + P+PV
Sbjct: 734 WGDNEFSQIGDGNVADRDEPAPV 756
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG + GQLGH G +++P+ + +L + +A G H+ ALT+ G ++ W
Sbjct: 104 EVFSWGSDNYGQLGHQ--LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTY----FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLGLG T P ES IP L+ACG +HT +
Sbjct: 162 GANDFGQLGLGTIT------PYESTPTTVCSLSGIPF-------ALIACGANHTFAVSKS 208
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + GWG N GQ + +P+ + VR ++ G S LT
Sbjct: 209 GAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLT 258
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I+ WG GQLG ++ E P V +L GI +ACG HT A++ GA++ W
Sbjct: 157 EIFVWGANDFGQLGLGTITP--YESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL T S F P + T RN + V+ ++CG + DG +
Sbjct: 215 GKNINGQLGLN-DTVSKKF-PTQLRT-LRN-------SRVRFISCGDEFSTFLTLDGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
G YGQ + ++ P V +G + +++ G HS
Sbjct: 265 SCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHS 306
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLGH + P+ V LD I +VACG +H+ AL+ G +++WG
Sbjct: 55 VYSCGSNDYGQLGHDQPRKR-----PQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109
Query: 65 GCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG LG + +P + I L VQ +A G H++ G+I
Sbjct: 110 SDNYGQLGHQLG---GTLQIVP-------KLIKSLAKYQVVQ-IAAGQRHSVALTNAGEI 158
Query: 123 HGWGYNSYGQ 132
WG N +GQ
Sbjct: 159 FVWGANDFGQ 168
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG ++ + P+ + + + A G HT LT G +Y+ G
Sbjct: 1 MFGWGSTIHGELGLGGIEE-EHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCG 59
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG Q R + + D Y + VACG H+L R G++
Sbjct: 60 SNDYGQLG-HDQPRKRPQLVSGLDAY-----------SIINVACGEMHSLALSRWGEVFS 107
Query: 125 WGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG ++YGQ ++ T P + +V ++AAG HS LT+A
Sbjct: 108 WGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNA 155
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+++ G G GQLGH + E+LPR+V+ L G I ++CG H+ A S+G +Y++
Sbjct: 263 VFSCGAGMYGQLGHGGTSN---EILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 46/207 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ TWG+G GQLGH + ++ P+ + +L +I V CG HT LT G +Y+W
Sbjct: 824 ELLTWGVGENGQLGH---GDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI----------------LVVPNGVQLVA 107
G + GQLGLG T+ S + + + + I LV NG + A
Sbjct: 881 GASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGA 940
Query: 108 ----------------------CGHSHTLVYMRDGKIHGWGY-NSYGQAANEKSTYAWYP 144
CGH T G ++ WG G N T P
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTET---SP 997
Query: 145 SPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ + +R+++ GG H+A LTD+
Sbjct: 998 KLIEALRNQSIRQISCGGRHTAFLTDS 1024
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 4 DIYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+Y WG G+V + + + +LLP ++ +L + V+ G H A+ + G L
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVV--SVSIGFCHGAAVRANGELL 826
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + GQLG G +S T F + V CG HT+ ++GK
Sbjct: 827 TWGVGENGQLGHGDTNNQIEPKIIQSLTSF----------WITQVQCGEKHTICLTKNGK 876
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDA 170
++ WG + YGQ T + SP+ E V ++A+G H AVLT +
Sbjct: 877 VYSWGASEYGQLGLGDVTQ--HSSPMQVSALEKYNVLQIASGSTHCAVLTTS 926
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G +LGH E P+ + AL I+ ++CGG HT LT G ++
Sbjct: 976 DVYTWGTGQ--ELGH---GGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTC 1030
Query: 64 GGCQAGQLG 72
G GQLG
Sbjct: 1031 GKDSFGQLG 1039
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 57/173 (32%)
Query: 5 IYTWGLGSVGQLG-----------------------------HCSLQSGDKELL------ 29
+Y+WG GQLG HC++ + KE+L
Sbjct: 877 VYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA 936
Query: 30 ----------PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRS 79
P V +L + I + CG T A+T G +Y WG Q +LG G
Sbjct: 937 AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHG----- 989
Query: 80 FSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
N ++T + I L ++ ++CG HT G+I G +S+GQ
Sbjct: 990 ----GNSTETSPKLIEAL-RNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LGH ++ +PR+V++L + +CGG HT LT+KG+++ +
Sbjct: 573 ELYTWGSGEDGRLGHGDMRD---RAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTF 629
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNG--VQLVACGHSHTLVYMRD 119
G + G+LGLG D +R+ P +V P G + LV CG + T R
Sbjct: 630 GRGRNGRLGLG-------------DNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQ 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA--------GGGHSAVLTDAC 171
G + WG GQ Y V CV ++R +A G H+ VLT +
Sbjct: 677 GSVFTWGKTGEGQCG---LGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASG 733
Query: 172 SL 173
L
Sbjct: 734 EL 735
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALD---GIFIKDVACGGVHTCALTSKGAL 60
++TWG GQ C L D+ +++PR V L G + DVACG HT LT+ G L
Sbjct: 679 VFTWGKTGEGQ---CGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGEL 735
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLVYMR 118
Y+WG + GQLG G + +P +P L P+ + V CG H++
Sbjct: 736 YSWGLGEYGQLGTG---DVYQPLPARV-----QLPADALCAPDQLARVYCGAFHSIATTE 787
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WG NSYG + P +D C +L GH +
Sbjct: 788 QRVMFAWGLNSYGACGLGHTANKDKPERID-CFSSQTELVVACGHKYTI 835
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG SL+ G +L P+ V +G I VACGG H LTS G +Y++
Sbjct: 449 MYVWGRPP-------SLEGGTPLVLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSY 501
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------------LVACG 109
G + ++ S +P+ T + + P+ V+ +VACG
Sbjct: 502 GDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACG 561
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
H+L G+++ WG G+ + P V + E V + GG H+AVLT
Sbjct: 562 AQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLT 621
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD-KELLPRRV-VALDGIFIKD----VACGGVHTCALTSK 57
++Y+WGLG GQLG +GD + LP RV + D + D V CG H+ A T +
Sbjct: 734 ELYSWGLGEYGQLG-----TGDVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQ 788
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
++AWG G GLG P D + + +VACGH +T+
Sbjct: 789 RVMFAWGLNSYGACGLGHTANKDK--PERIDCFSSQTEL--------VVACGHKYTI 835
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 35 ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI 94
AL I VACG H+ A+T G LY WG + G+LG G D R +
Sbjct: 549 ALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHG-------------DMRDRAV 595
Query: 95 PILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
P V+ V +CG +HT V G + +G G+ + + P P+
Sbjct: 596 PRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPI 651
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
I +WG G GQLGH GD E LP + AL I I V+CG H+ AL+S+G +++
Sbjct: 987 ILSWGRGIFGQLGH-----GDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFS 1041
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT--LVYMRDG 120
WG + GQLG G T + +P E D +FR I V ++ACGHSH+ + +
Sbjct: 1042 WGYGEDGQLGHG-DTNDY-LLPKEID-FFRKNSI-----NVGMIACGHSHSGCITDGQSS 1093
Query: 121 KIHGWGYN 128
+++ WG N
Sbjct: 1094 QLYLWGCN 1101
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G G+ G+ S E LP + A ++CG H+ A+TS G + +WG
Sbjct: 937 VFVWGSGKDGRCGNGKESS---EKLPNQ--ANTSHNFTQLSCGYHHSAAVTSDGMILSWG 991
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI--LVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G +++ Y PI LV +Q V+CG H++ G+I
Sbjct: 992 RGIFGQLGHG-----------DTENYSLPTPIEALVKIQIIQ-VSCGWQHSMALSSQGRI 1039
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLTDACS 172
WGY GQ + + P +D+ V +A G HS +TD S
Sbjct: 1040 FSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQS 1092
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H +T G LYAWG QLGLG + F +P + ++ + V
Sbjct: 1316 ISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFD-VPTKVSKGLQS-------SKV 1367
Query: 104 QLVACGHSHT 113
+ V+CG+ HT
Sbjct: 1368 KFVSCGYFHT 1377
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG G G+LG +L D + P + D +K +ACGG HT LT G +YA G
Sbjct: 102 WGNGDFGRLGLGNL---DSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNN 158
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG+ + R FS P E + +P ++ G++H+ V DG+++ WG
Sbjct: 159 FGQLGISDEKR-FSTEPVE----------VRIPKEAMHISAGYNHSCVVTADGELYMWGV 207
Query: 128 NSYGQ-AANEKSTYAWY-PSPVDWCVGEVRKLAA-GGGHSAVLTD 169
NS GQ +KS A + P+ VD G V K AA G HS + D
Sbjct: 208 NSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD 252
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG+ S GQLG +S LP +V +LDGI IK A G H+ A+ G +++W
Sbjct: 201 ELYMWGVNSNGQLG-LGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSW 259
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G ++G+LG G ++ F+ + S+ R I L V+ VA G H+ +G ++
Sbjct: 260 GDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIK-VKHVAAGMLHSACVDENGAVY 318
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+G + + + ++ A PS + + + ++A GG H+ VLT L
Sbjct: 319 IFGERATNRVSFGEANKATTPSLISTLL-DCEEVACGGYHTCVLTKGGDL 367
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 19 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
S +K P + L + ++VACGG HTC LT G LY+WG + G LG G +
Sbjct: 328 VSFGEANKATTPSLISTL--LDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG--ST 383
Query: 79 SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
S S +P + F P V V+CG HT + G I WG+
Sbjct: 384 SVSHLPERVEGPFSKSP-------VSKVSCGWKHTAA-ISGGAIFTWGW 424
>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
Length = 498
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
L + WGL G C L + +L P V AL G+ + +A G HT +++G +Y
Sbjct: 309 QLLTFGWGL-----HGQCGLGNTHDQLRPACVSALSGVKVXGIAAGLWHTLCFSAEGQVY 363
Query: 62 AWGGCQAGQLGLGPQTRSF-SFIPNESDTYFRN-----IPILVVPNGVQ-----LVACGH 110
A+GG Q GQLG G F S I S FR +P L+ + ++ +V+CG
Sbjct: 364 AFGGNQFGQLGTGADQAEFDSRIXIPSLGEFRKRLTETLPKLLDASNLENKRAKIVSCGA 423
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H++V G+I WG+N YGQ PSPV +++ +A G H+ +L
Sbjct: 424 RHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLL 480
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 12 SVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAG 69
S Q S S D+ L P V G+ I VA GG HT AL+ G ++ WG G
Sbjct: 180 SAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMGQVWGWGYGGEG 239
Query: 70 QLGLGPQTRSFS---FIP-NESDTYFRNIPILV-------------VPNG-VQLVACGHS 111
QLGLG +T+ S IP Y ++ P LV VP V+ +ACG
Sbjct: 240 QLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGR 299
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
H+ V G++ +G+ +GQ + P+ V G +V +AAG H+ +
Sbjct: 300 HSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVXGIAAGLWHTLCFSAE 359
Query: 171 CSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHL 216
+ + + T ++ +E + SR +L +RL E L
Sbjct: 360 GQVYAFGGNQFGQLGTGADQAEFD---SRIXIPSLGEFRKRLTETL 402
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G GQLGH GD +++P+ V + G +K V+ G HT A+T GAL+
Sbjct: 294 VYTWGQGRYGQLGH-----GDDVDKIIPQPVPRIKG-EVKSVSAGFYHTVAVTHHGALFT 347
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVA--CGHSHTLVYM 117
WG + G+LG +D R IP LV + G+ + A G SHTLV
Sbjct: 348 WGDGKEGKLG-------------HNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLN 394
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
R G++ +G G+ + W P+ + E +AAG HS LTD
Sbjct: 395 RRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD 447
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGA 59
H ++TWG G G+LGH + L+P V A G+ + GG HT L +G
Sbjct: 342 HGALFTWGDGKEGKLGH---NDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQ 398
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++++G +G+LG G N++D + + +A G +H++
Sbjct: 399 VFSFGSGDSGRLGHG----------NDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQ 448
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAVLTDACSLKEL 176
G+I+ WG G+ + + P + + K +AAG H+ + SL L
Sbjct: 449 GQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITL 508
Query: 177 CEF---RLAE 183
R+AE
Sbjct: 509 GRVSHGRMAE 518
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALY 61
IYTWG G +G+LGH S E+LPR++ ++ D I VA G HTC S+G+L
Sbjct: 450 QIYTWGCGKLGRLGHGS---DSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLI 506
Query: 62 AWGGCQAGQLGLG 74
G G++ G
Sbjct: 507 TLGRVSHGRMAEG 519
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
L RRVV ++ G H A+T G +Y WG + GQLG G IP
Sbjct: 269 LLRRVV------FSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVD--KIIPQ--- 317
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV- 147
P+ + V+ V+ G HT+ G + WG G+ + + P+ V
Sbjct: 318 ------PVPRIKGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVA 371
Query: 148 ---DWCVGEVRKLAAGGGHSAVL 167
+W + V AGG H+ VL
Sbjct: 372 AFIEWGM-PVAAAQAGGSHTLVL 393
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG S GQLG ++ S + P +V A GI + GG H AL+S G +Y WG
Sbjct: 782 LYSWGDNSRGQLGR-TVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWG 840
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQLG + + + P ++DT P V V+ G HT+ G ++
Sbjct: 841 DNSAGQLGRTVTSNNPADKPGKADT-----PADVT---FTSVSAGQGHTVAVDTQGDVYT 892
Query: 125 WGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL---KELCEF 179
WG N++G+ + ST A P D G + +AG HS ++D S+ +
Sbjct: 893 WGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANG 952
Query: 180 RLAESVTLSNASE 192
RL ++ A +
Sbjct: 953 RLGRDTNITPADK 965
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IYTWG S GQLG ++ S + P + + V+ G HT A+ ++G +Y W
Sbjct: 835 NIYTWGDNSAGQLGR-TVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTW 893
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G G+LG T + + P ++DT P G+ + G SH++ DG
Sbjct: 894 GDNTHGELGRS-TTSTPADKPGKADT----------PAGITFTQASAGESHSVAVSDDGS 942
Query: 122 IHGWGYNSYGQAANEKS-TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
I+ WG + G+ + + T A P D G + +AGG HS L SL
Sbjct: 943 IYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSL 996
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG S GQLG + D P + A G+ V+ G + AL S G+LY+WG
Sbjct: 729 LYTWGDNSHGQLGRDTADKPDSH--PSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWG 786
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
GQLG + + + P++ + P G+ V + G SH + DG I
Sbjct: 787 DNSRGQLGRTVTSNNPANRPHK----------VEAPAGITFVQASAGGSHVVALSSDGNI 836
Query: 123 HGWGYNSYGQ 132
+ WG NS GQ
Sbjct: 837 YTWGDNSAGQ 846
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVHTCALTSKGALYA 62
+Y+WG GQLG + + ++ PR+V G+ F K V+ H+ AL S G LY+
Sbjct: 410 LYSWGWNEYGQLGRNTAPA-RQDRTPRKVTMPAGVTKFTK-VSAEHRHSLALGSDGNLYS 467
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRD 119
WG QLG + + P + + P GV V+ G+SH+L D
Sbjct: 468 WGLNDCKQLGRDTGSAKYDVKPGK----------VPTPAGVAQFTEVSAGYSHSLAIGSD 517
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N YG+
Sbjct: 518 GNLYSWGQNKYGE 530
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG + +LG D++ P V G+ V+ G H A+ S G LY+W
Sbjct: 188 NLYRWGDNNY-KLGTPE----DEKRTPSLVNPPTGVHFTQVSTGYTHFLAIGSDGNLYSW 242
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLV-AC-GHSHTLVYMRDG 120
G G+LG + S P + + N P LV P GV AC G H+L DG
Sbjct: 243 GNNADGELGR----ETVSTTPKD-NPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSDG 297
Query: 121 KIHGWGYNSYGQAANEKST--YAWYPSPVDWCVG--EVRKLAAGGGHSAVL 167
++ WG N YG+ + + Y P V+ G ++ +++AG +S L
Sbjct: 298 NLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYSMAL 348
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
IYTWG + G+LG ++ DK P + G+ + GG H+ AL S G+LY W
Sbjct: 943 IYTWGDTANGRLGRDTNITPADK---PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTW 999
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G +G+ G PN+ DT P G+ + G S+ L DG
Sbjct: 1000 G--DSGKTSAG--------RPNKVDT----------PAGITFTQASAGASYCLALGSDGN 1039
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV 147
++ WG N+ GQ + W SP
Sbjct: 1040 LYSWGDNAKGQLGRDTGD-TWSASPA 1064
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGGVHTCALTSKG 58
++Y+WG + G+LG ++ + K+ P+ V G+ G H+ AL S G
Sbjct: 238 NLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSDG 297
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
LY+WG + G+LG + + P + N+P + + ++ G +++
Sbjct: 298 NLYSWGENKYGELGRDTGSAIYDVKPGKV-----NLPKGIT--KITQISAGTFYSMALDS 350
Query: 119 DGKIHGWGYNSYGQ 132
DG ++ WG N+Y +
Sbjct: 351 DGDLYSWGDNTYDE 364
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 16/187 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYA 62
D+Y+WG + +LG + ++ PR++ G+ + G + A +S G+LY+
Sbjct: 353 DLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSLATSSDGSLYS 412
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG + P D R + + V+ H H+L DG +
Sbjct: 413 WGWNEYGQLGR-------NTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALGSDGNL 465
Query: 123 HGWGYNSYGQAANEKSTYAW------YPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 176
+ WG N Q + + + P+P V + +++AG HS + +L
Sbjct: 466 YSWGLNDCKQLGRDTGSAKYDVKPGKVPTPA--GVAQFTEVSAGYSHSLAIGSDGNLYSW 523
Query: 177 CEFRLAE 183
+ + E
Sbjct: 524 GQNKYGE 530
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYA 62
++Y+WG G+LG + S ++ P +V GI I ++ G ++ AL S G LY+
Sbjct: 298 NLYSWGENKYGELGRDT-GSAIYDVKPGKVNLPKGITKITQISAGTFYSMALDSDGDLYS 356
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRD 119
WG +LG R P R+ + +P GV+ + G +L D
Sbjct: 357 WGDNTYDELG-----RYAGGYPFRD----RSPRKMTMPAGVKKFTWIKAGEWTSLATSSD 407
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG+N YGQ
Sbjct: 408 GSLYSWGWNEYGQ 420
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 33/165 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
D+YTWG + G+LG + + DK P + GI + G H+ A++ G++Y
Sbjct: 889 DVYTWGDNTHGELGRSTTSTPADK---PGKADTPAGITFTQASAGESHSVAVSDDGSIYT 945
Query: 63 WGGCQAGQLG----LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 116
WG G+LG + P + P ++DT P GV + G H++
Sbjct: 946 WGDTANGRLGRDTNITPADK-----PGKADT----------PAGVTFTQASAGGKHSIAL 990
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
DG ++ WG + T A P+ VD G A+ G
Sbjct: 991 GSDGSLYTWG--------DSGKTSAGRPNKVDTPAGITFTQASAG 1027
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
GI I G +H+ A+ S G+LY WG GQLG + S P++++
Sbjct: 707 GIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSH-PSKAE--------- 756
Query: 98 VVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
P GV V+ G+ ++ DG ++ WG NS GQ
Sbjct: 757 -APAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQ 792
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 82/210 (39%), Gaps = 47/210 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH + E +P +V AL + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPA--GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPILVV----------------------- 99
G + GQ G P+ + + P D R P L+V
Sbjct: 117 GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 100 ---PNG----------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
P G V+L+A G H L DG + WG N YGQ +
Sbjct: 177 QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P PV G + +AAGG HS LTD
Sbjct: 237 RSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P V L G+ + D+A GG H+ ALT G +Y WG
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + L+ + ++CG +H++ DG++
Sbjct: 275 RGEHGRLGFGDNDKSSKMVPQKVQ--------LLSGEEIVQISCGGTHSVAVTSDGRMFS 326
Query: 125 WGYNSYGQAANEKSTYAWYPS--PVD 148
+G +G+ + P P+D
Sbjct: 327 FGRGDHGRLGYGRKVTTGQPEEVPID 352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P++V L G I ++CGG H+ A+TS G ++++
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSK-MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP------NG---VQLVACGHSHTL 114
G G+LG G + + P E +PI + P NG +LVACG HTL
Sbjct: 328 GRGDHGRLGYGRKVTTGQ--PEE-------VPIDIPPPRGRTENGHWIAKLVACGGRHTL 378
Query: 115 VYMR 118
++
Sbjct: 379 ALVQ 382
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG G GQLG L + ++ + AL+ + V G ++ A+T G L+ WG
Sbjct: 7 IIAWGSGEDGQLG---LGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG T+S + +P++ N+ I+ A G H L G+ +
Sbjct: 64 WNQRGTLGHPAGTKSEN-VPSQVKA-LSNVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAAN--EKSTYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ EK P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLT 167
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGHE--REGNK---PEQIGALADQHIIHVACGESHSLALSDQGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ E S+ A P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFSSQA-SPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GS GQLG + + D +PR + L+ I V+CG H AL + G + W
Sbjct: 104 QLFSWGAGSDGQLG--LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLGLG + F S R++ G+ L VA G +H+ G
Sbjct: 162 GKNSHGQLGLGKE-----FSSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGA 210
Query: 122 IHGWGYNSYGQ----------------AANEKSTYAWYPSPVDWCVGEVRK---LAAGGG 162
+ GWG N+ GQ N + Y+ SP + +K ++ G
Sbjct: 211 VFGWGMNNAGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDE 270
Query: 163 HSAVLT 168
H+AVLT
Sbjct: 271 HTAVLT 276
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG S P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLGKEFSSQAS--PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGL----GPQTRSFSFIPNESDTYF-RNIPI---LVVPNGVQLVACGHSHTLV 115
G AGQLGL G + + N Y R P L+ V ++CG HT V
Sbjct: 215 GMNNAGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAV 274
Query: 116 YMRDGK 121
++ +
Sbjct: 275 LTKEHR 280
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDQGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 82/210 (39%), Gaps = 47/210 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH + E +P +V AL + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPA--GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPILVV----------------------- 99
G + GQ G P+ + + P D R P L+V
Sbjct: 117 GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 100 ---PNG----------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
P G V+L+A G H L DG + WG N YGQ +
Sbjct: 177 QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P PV G + +AAGG HS LTD
Sbjct: 237 RSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P V L G+ + D+A GG H+ ALT G +Y WG
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + +L VQ ++CG +H++ DG++
Sbjct: 275 RGEHGRLGFGDNDKSSKMVP-------QKVQLLSGEEIVQ-ISCGGTHSVAVTSDGRMFS 326
Query: 125 WGYNSYGQAANEKSTYAWYPS--PVD 148
+G +G+ + P P+D
Sbjct: 327 FGRGDHGRLGYGRKVTTGQPEEVPID 352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P++V L G I ++CGG H+ A+TS G ++++
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSK-MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP------NG---VQLVACGHSHTL 114
G G+LG G + + P E +PI + P NG +LVACG HTL
Sbjct: 328 GRGDHGRLGYGRKVTTGQ--PEE-------VPIDIPPPRGRTENGHWIAKLVACGGRHTL 378
Query: 115 VYMR 118
++
Sbjct: 379 ALVQ 382
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG G GQLG L + ++ + AL+ + V G ++ A+T G L+ WG
Sbjct: 7 IIAWGSGEDGQLG---LGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG T+S + +P++ N+ I+ A G H L G+ +
Sbjct: 64 WNQRGTLGHPAGTKSEN-VPSQVKA-LSNVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAAN--EKSTYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ EK P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLT 167
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++AW
Sbjct: 204 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAW 261
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 262 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 311
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 312 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 362
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 101 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQNIVHVACGESHSLALSDRGQLFSW 155
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 156 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 206
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 253
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 310 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 366
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 367 GCGARGQLGTG 377
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 258 VFAWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 314
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 315 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 364
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 365 AFGCGARGQLGTGHTCNVKCPSPV 388
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+K+VACGG H+ L G +Y G GQLG + I +D
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALAD------------ 130
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ VACG SH+L G++ WG S GQ
Sbjct: 131 QNIVHVACGESHSLALSDRGQLFSWGAGSDGQ 162
>gi|294868608|ref|XP_002765605.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239865684|gb|EEQ98322.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1287
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 28/176 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVV---ALDGIFIKDVACGGVHTCALTSKG 58
++Y G SVGQLG +G+ E + P+ V+ G+ I+ ++ G H CA++ G
Sbjct: 201 EVYGTGNNSVGQLG-----TGNTEEITTPKPVLNCGQTYGVPIRQISAGDAHACAISISG 255
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI---PILVVP--NGVQLVACGHSHT 113
L+ WG + GQLG + R + P+ +P VQ+ +CG HT
Sbjct: 256 VLFTWGSNRKGQLG-------------RENAGHREVLPGPVSCLPPTKAVQMASCGAQHT 302
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ G+++ WG N++GQ + P P++ EV + A GGH + D
Sbjct: 303 AAVVQGGQVYLWGDNAFGQCGVDAVEEPILPIPINLQSKEVWRTVACGGHHTLFLD 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 11 GSVGQLGHCSLQSGD--KELLPRRVVA---LDGIFIKDVACGGVHTCALTSKGALYAWG- 64
G + + G+ + GD + L R+VA L+ F+ V CG HT ALTS WG
Sbjct: 96 GGLNEKGYITGPDGDDSESLFKPRLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGR 155
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G S +P ++V P V VACG TL+ + G+++G
Sbjct: 156 DNEFGQVGHG--QPSIKPMPPR---------MMVTPQEVCQVACGGDFTLLLLETGEVYG 204
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVLT 168
G NS GQ + P PV C G+ +R+++AG H+ ++
Sbjct: 205 TGNNSVGQLGTGNTEEITTPKPVLNC-GQTYGVPIRQISAGDAHACAIS 252
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGALYAW 63
++TWG GQLG + +G +E+LP V L ++ +CG HT A+ G +Y W
Sbjct: 257 LFTWGSNRKGQLGREN--AGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQGGQVYLW 314
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ------LVACGHSHTLVYM 117
G GQ G+ PIL +P +Q VACG HTL
Sbjct: 315 GDNAFGQCGVDAVEE----------------PILPIPINLQSKEVWRTVACGGHHTLFLD 358
Query: 118 RDGKIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G++ G G N GQ + P+ + + V +AAG HSAVL
Sbjct: 359 VNGQLFGCGSNEDGQLGTGFPGRSSELRPTLMPRSLA-VFSVAAGRSHSAVL 409
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + +++ PR++ AL G + VACG H+ +T G L+ +
Sbjct: 3512 EVFSWGDGDYGKLGH---GNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTF 3568
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G G+LGLG +T + +P V P V+L+ACG +HT+V D
Sbjct: 3569 GASDLGRLGLG-------------NTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDR 3615
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLT 168
+ + +G YGQ ++T P VD + ++K+ G + LT
Sbjct: 3616 ESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALT 3665
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYAW 63
IY+WG G G+LGH + + P+ ++ + G ++ +A G H+ A+TS+G LY W
Sbjct: 490 IYSWGDGDYGKLGHGNHVTQKS---PKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTW 546
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDG-K 121
G G+LG G D + R+IP LV GV V+CG S T+V +D
Sbjct: 547 GDGDYGRLGHG-------------DNHSRSIPTLVKDITGVGSVSCGSSFTVVISQDATT 593
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G G+ + ++ + P + G +RK+ S LT
Sbjct: 594 VWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALT 641
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G G GQLG L ++ P+ V A + IK + CG T ALT +G +Y+ G
Sbjct: 3618 VWTFGEGEYGQLG---LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCG 3674
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ + F +D Y + + + + ++ +A G+ H L ++G +
Sbjct: 3675 HNRCNGI--------FEVDTQHADYYPQQV-MALSEQFIEDIAAGYEHALALTKEGDVWS 3725
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG ++ GQ ++ P + G+ +R+++AG HSA T A
Sbjct: 3726 WGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAAWTVA 3772
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + L G+ I+ V C + ALTS G ++
Sbjct: 594 VWSFGAGDNGKLGH-----GDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFV 648
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG LG G +F +P D F+++ I+ +A G +H L D +
Sbjct: 649 WGSGPC--LGYGQADATF-LVPKRLDE-FQDLQIID-------IAVGDNHCLALTCDNDV 697
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS----AVLTDAC---SL 173
+ WG N+ GQ N S + + +++ G HS A+ TD C S
Sbjct: 698 YSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCIVTSY 757
Query: 174 KELC 177
K C
Sbjct: 758 KPFC 761
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIKDVACG-GV--HTCALTSKGALYAW 63
G GS G+LG G+ + LPR + AL G + ++A G+ H+ ALT G +++W
Sbjct: 3462 GEGSYGRLGQ-----GNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSW 3516
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G R P + + + V VACGH H+ + DGK+
Sbjct: 3517 GDGDYGKLGHGNSERQRR--PRQIEA--------LRGEDVLHVACGHKHSAIVTVDGKLF 3566
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G + G+ ++ P+ V V +A G H+ V+T
Sbjct: 3567 TFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVT 3612
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 18/152 (11%)
Query: 23 SGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
+ + E+LP +A+D I+ V +++K Y WGG + GQL ++
Sbjct: 3373 TKENEILPPWKLAMDREIIEWVT-DRPQDWKMSAKCEAYTWGGGRHGQLA---ESGRLVL 3428
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
P + ++ + + + CGH+ T V DG + G SYG+ S
Sbjct: 3429 QPTLTSSFSK----------AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLP 3478
Query: 143 YPSPVD----WCVGEVRKLAAGGGHSAVLTDA 170
P+ + V E+ GHS LT+
Sbjct: 3479 RLRPITALQGFVVTELATSTGLEGHSLALTET 3510
>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
Length = 385
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GS GQLGH L ++ PR V AL G+ + V+ GG H+ ++ G LY WG
Sbjct: 182 VYTWGQGSHGQLGHGGLLPEEE---PRTVEALWGMKMSSVSAGGWHSVCISDAGDLYVWG 238
Query: 65 GCQAGQLGLGPQ-----------------TRSFSFIPNESDTYFRNIPIL--VVPN-GVQ 104
++GQLGL Q +++ S E + P L V P V+
Sbjct: 239 WNESGQLGLPSQRLRKTSEKKTDQQEGELSQNSSTHQEEVFISIQAFPALFDVTPLCEVK 298
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
V+CG HT G ++ WG+ YGQ ++ + + P V++
Sbjct: 299 TVSCGSRHTAAVTTSGDLYTWGWGEYGQLGHQSFSSSDEPQRVEF 343
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 51/169 (30%)
Query: 4 DIYTWGLGSVGQLGHCSLQ--------------------SGDKELLPRRVVALDGIF--- 40
D+Y WG GQLG S + S +E + + A +F
Sbjct: 233 DLYVWGWNESGQLGLPSQRLRKTSEKKTDQQEGELSQNSSTHQEEVFISIQAFPALFDVT 292
Query: 41 ----IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
+K V+CG HT A+T+ G LY WG + GQLG Q+ S S P + +FR +
Sbjct: 293 PLCEVKTVSCGSRHTAAVTTSGDLYTWGWGEYGQLGH--QSFSSSDEPQRVE-FFRAQQL 349
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
VV V CG +N++ ANE+ YP+
Sbjct: 350 HVVG-----VVCG----------------PWNTFAAVANEEGLAPEYPT 377
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
K +A GG H LT+ GA+Y WG GQLG G +P E R + L
Sbjct: 164 KSLALGGEHVILLTATGAVYTWGQGSHGQLGHG------GLLPEEEP---RTVEALW--- 211
Query: 102 GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
G+++ V+ G H++ G ++ WG+N GQ
Sbjct: 212 GMKMSSVSAGGWHSVCISDAGDLYVWGWNESGQ 244
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG+ S + L+P + + L G+ ++ G H+ AL S G + WG
Sbjct: 441 VWGWGYNSTGQLGN---NSATQSLVPVQALGLTGVV--SISAGSNHSMALKSDGTAWIWG 495
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG + + S +P + +P L +GV ++ G+ H++ DG +
Sbjct: 496 GNSDGQLG--NNSTAQSLVPVQ-------VPGL---SGVSAISAGNYHSMALKSDGTVWA 543
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS GQ N +T + P V + ++AG HS L
Sbjct: 544 WGRNSSGQLGNNSTTVSLVPIQV---LTGTTSVSAGTYHSMAL 583
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + G LG+ S + +P +V L G+ V G +H+ AL S G ++AWG
Sbjct: 708 WAWGDNAYGMLGNNSTVTSS---IPVQVSGLTGV--SSVKAGRLHSMALKSDGTVWAWGY 762
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T+ R +P+ V V ++ G H++V DG +
Sbjct: 763 NTEGQLGDGSTTQ-------------RLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWA 809
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG NS GQ N +T + P V G A +AV +D +L
Sbjct: 810 WGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAGTNTSAAVKSDGTAL 858
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG + GQLG+ S+ + L+P +V L G+ ++ G ++ A+ S G ++AWG
Sbjct: 339 LWTWGYNNRGQLGNNSIT---QSLVPVQV--LTGV--ASISAGYDYSLAVKSDGTVWAWG 391
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ G S I T +I N +SH+L DG + G
Sbjct: 392 RNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNN--------YSHSLALKSDGTVWG 443
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYNS GQ N +T + P G V ++AG HS L
Sbjct: 444 WGYNSTGQLGNNSATQSLVPVQALGLTGVV-SISAGSNHSMAL 485
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQLG+ S + L+P +V L G+ ++ G H+ AL S G ++AWG
Sbjct: 492 WIWGGNSDGQLGN---NSTAQSLVPVQVPGLSGV--SAISAGNYHSMALKSDGTVWAWGR 546
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
+GQLG T S +PI V+ G V+ G H++ DG + GW
Sbjct: 547 NSSGQLGNNSTTVSL-------------VPIQVL-TGTTSVSAGTYHSMALKSDGAVWGW 592
Query: 126 GYNSY 130
G N Y
Sbjct: 593 GNNEY 597
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG S + L+P +V L+ + ++ G H+ + S G ++AWG
Sbjct: 757 VWAWGYNTEGQLGDGSTT---QRLVPVQVSGLEDVIA--ISAGDYHSMVIKSDGTVWAWG 811
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG T S +P + +P L GV L++ G + + DG
Sbjct: 812 RNSNGQLGNNSTTGSL--VPVQ-------VPGLT---GVALISAGTNTSAAVKSDGTALA 859
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG N+YGQ + + P V VG + HS +L
Sbjct: 860 WGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLIL 903
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG+ S L+P +V L G+ + ++ G + A+ S G AWG
Sbjct: 807 VWAWGRNSNGQLGN---NSTTGSLVPVQVPGLTGVAL--ISAGTNTSAAVKSDGTALAWG 861
Query: 65 GCQAGQL------------------GLGPQT----RSFSFIPNESDTYF---RN------ 93
GQL G+G + S S I T + RN
Sbjct: 862 SNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIG 921
Query: 94 --------IPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
+P+ + GV ++ G H++ DG I GWGYN YGQ + +T P
Sbjct: 922 NNSITDSKVPVQTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981
Query: 145 SPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLS 188
L GGG+ A T +L + + +++ LS
Sbjct: 982 VASKRWFFPDDYLNLGGGYEAPGTFESGTIDLGKKTINDTINLS 1025
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG 102
V G H AL S G ++AWG G+LG G T R +P+ V
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLGDG-------------STINRIVPVQVSGLTE 319
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 162
V ++ H++ DG + WGYN+ GQ N T + P V + V ++AG
Sbjct: 320 VSAISAAFGHSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQV---LTGVASISAGYD 376
Query: 163 HS-AVLTDA 170
+S AV +D
Sbjct: 377 YSLAVKSDG 385
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
++ AL S ++AWG +G LG G + P T GV+ ++ G
Sbjct: 647 YSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDLT------------GVEQISAG 694
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H+L DG WG N+YG N + + P V G V + AG HS L
Sbjct: 695 EGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTG-VSSVKAGRLHSMAL 751
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAW 63
IY+WG G G+LGH + GD +PR + G + VACG HT +T GALY +
Sbjct: 84 IYSWGWGDFGRLGHG--ECGDV-FVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTF 140
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG + +D + + V VACG H+L G +
Sbjct: 141 GRNQNGQLGLG----------HTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVF 190
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG+ YG + S + P+ V G V + G HSAV+TD
Sbjct: 191 SWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTD 237
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G LG Q P RVV LDG+ + V CG H+ +T +G ++ +G
Sbjct: 189 VFSWGWGRYGNLGDGDSQ---DRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFG 245
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGK 121
+ GQLG G D P LV V VA G HT+ +G
Sbjct: 246 WSKYGQLGHG-------------DHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGN 292
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV 147
++ WG+N +GQ S P+PV
Sbjct: 293 LYAWGWNKFGQLGLGDSEDRAAPTPV 318
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALYAW 63
+ +WG G GQLGH D+ P + AL + V CG +T A+ +S+G +Y+W
Sbjct: 31 VASWGRGEDGQLGH---GQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSW 87
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGKI 122
G G+LG G F P +F P V VACG +HTLV + DG +
Sbjct: 88 GWGDFGRLGHGECGDVFVPRPI---AFFSGRP-------VARVACGDTHTLVVTQGDGAL 137
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ +G N GQ + P V GE V +A G HS T+A ++
Sbjct: 138 YTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTV 189
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLG L + L P+ V AL G + VACG H+ A T G +++WG
Sbjct: 137 LYTFGRNQNGQLG---LGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWG 193
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGK 121
+ G LG G D+ R P VV +GV + V CG H+ V +G+
Sbjct: 194 WGRYGNLGDG-------------DSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGR 240
Query: 122 IHGWGYNSYGQ 132
+ +G++ YGQ
Sbjct: 241 VFTFGWSKYGQ 251
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++T+G GQLGH GD P V L + VA G HT A S+G LYA
Sbjct: 241 VFTFGWSKYGQLGH-----GDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYA 295
Query: 63 WGGCQAGQLGLGPQTRSFSFIP--NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + GQLGLG + P P V L+ACG HT+ G
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355
Query: 121 KIHGWGYNSYGQ 132
+++ WG GQ
Sbjct: 356 EVYSWGRGVNGQ 367
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGP--QTRSFSFIPNESDTYFRNIPILV 98
+ V+CG H+ AL G + +WG + GQLG G Q S + I +D
Sbjct: 12 VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDA--------- 62
Query: 99 VPNGVQLVACGHSHTL-VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 156
GV V CG +T+ V G+I+ WG+ +G+ + + + P P+ + G V +
Sbjct: 63 ---GVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVAR 119
Query: 157 LAAGGGHSAVLT 168
+A G H+ V+T
Sbjct: 120 VACGDTHTLVVT 131
>gi|342182230|emb|CCC91709.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 612
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 18/137 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS G+LG + L+ RVV G + DVA G +TC LTSKG +Y +G
Sbjct: 149 LFSWGSGSFGELGTQRFDNNTPSLV--RVVPF-GSSVVDVALGADYTCVLTSKGDIYTFG 205
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--------VACGHSHTLVY 116
GC GQLGLG S S++ ++ + ++ VP + L VA G + +
Sbjct: 206 GCDWGQLGLG----SASYVEQHP---YKEVSVVRVPQRIPLFERCPAVHVAAGFAFAMAV 258
Query: 117 MRDGKIHGWGYNSYGQA 133
D +++ WG N++GQ+
Sbjct: 259 TADHRVYFWGNNNHGQS 275
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG+G G+LGH + + L P+RV AL + DVACG HT ALT G++Y
Sbjct: 393 ELFTWGIGFQGRLGHGNTE---PVLRPKRVRGALADRHVVDVACGSFHTVALTDCGSVYC 449
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
WG +GQ G+ T + + PN R + + + GV + + C T+V M
Sbjct: 450 WGDNTSGQCGMRWTTDTIT-SPN------RVVNLEFIAGGVARSITCDRQRTIVVM 498
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 4 DIYTWGLGSVGQLGHCSL----QSGDKEL----LPRRVVALDGIFIKDVACGGVHTCALT 55
DIYT+G GQLG S Q KE+ +P+R+ + VA G A+T
Sbjct: 200 DIYTFGGCDWGQLGLGSASYVEQHPYKEVSVVRVPQRIPLFERCPAVHVAAGFAFAMAVT 259
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ +Y WG GQ GLG + S E T +P+L VQL +CG TL
Sbjct: 260 ADHRVYFWGNNNHGQSGLGREYFRPSSRKVEGPTL---VPLLDGKEIVQL-SCGSFFTLG 315
Query: 116 YMRDGKIHGWG 126
RDG ++ WG
Sbjct: 316 LGRDGTLYSWG 326
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 90/231 (38%), Gaps = 23/231 (9%)
Query: 5 IYTWGLGSVGQ--LGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+Y WG + GQ LG + +++ P V LDG I ++CG T L G LY
Sbjct: 264 VYFWGNNNHGQSGLGREYFRPSSRKVEGPTLVPLLDGKEIVQLSCGSFFTLGLGRDGTLY 323
Query: 62 AWGGCQAGQLGLGPQTRSFSFIP--------NESDTYFRNIPILVVPNGVQLVA--CGHS 111
+WG LG + RS P +E ++ VP +LV G
Sbjct: 324 SWGLLDCLGLGTEAEVRSSIADPSIVSRSLSSEERVVVLEPQVVRVPTEHKLVRVHAGQW 383
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
H+ G++ WG G+ + + P V + + V +A G H+ LTD
Sbjct: 384 HSGAISSTGELFTWGIGFQGRLGHGNTEPVLRPKRVRGALADRHVVDVACGSFHTVALTD 443
Query: 170 ACSL-------KELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 213
S+ C R T+++ + + ++ G A + C+R R
Sbjct: 444 CGSVYCWGDNTSGQCGMRWTTD-TITSPNRVVNLEFIAGGVARSITCDRQR 493
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK PR + +L I+DVACG H+ A+TS G LY WG
Sbjct: 3017 VFSWGEGEDGKLGHGNCSSLDK---PRLIESLKSKRIRDVACGSGHSAAITSSGELYTWG 3073
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V V VACG + T+ D
Sbjct: 3074 LGEYGRLGHG-------------DTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3120
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P VD G V ++ G S LT
Sbjct: 3121 GSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALT 3170
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G I DVACGG H+ A+TS G LY WG
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWG 4060
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G + E+ ++ I VACG + TL D +
Sbjct: 4061 KGRYGRLGHGDSEDQLTPKLVEALQDYKVID----------VACGSGDAQTLCVTDDDNV 4110
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
WG YG+ S P ++ G V K+ G S LT + S+
Sbjct: 4111 WSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSI 4162
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWGLG G+LGH + +L P+ V +L G + VACG T ALT+ G++Y
Sbjct: 3068 ELYTWGLGEYGRLGHGDTNT---QLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+WG G+LG G ++ P+LV GV + CG +L +
Sbjct: 3125 SWGDGDFGKLGRGGSDGCYT-------------PLLVDRLNGLGVVQIECGAQFSLALTK 3171
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG Y + + + P+ V+ G +V +A G H +TD
Sbjct: 3172 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3223
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LGH GD+ P+ + +L I +ACG ++ AL+S G LY
Sbjct: 527 VYSWGNGDGGRLGH-----GDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYT 581
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACGH--SHTLVYM 117
WG G+LG G N D +P LV NG + VACG S TL
Sbjct: 582 WGRGNYGRLGHG----------NSDDVM---VPTLVSALNGHMIVYVACGSGDSQTLCVT 628
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG YG+ + P VD + V K+ GG SA LT
Sbjct: 629 ASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALT 680
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G G+LG C+ G K P+ V L I + V CGG + ALT+ G +Y
Sbjct: 633 VFSWGDGDYGKLGRGGCN---GSKT--PKIVDKLLDINVAKVYCGGQFSAALTAYGEVYT 687
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +A +LG G NE + + V+ + G H L D +
Sbjct: 688 WGKGEAYRLGHG----------NEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLV 737
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 738 YGWGRNDYGQ 747
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P V L+G+ + + CG + ALT G ++ WG
Sbjct: 3123 VYSWGDGDFGKLGR---GGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWG 3179
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3180 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQV 3227
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTD--ACSLKELC 177
+ WG N +GQ N + PS V + V +++ G HS VLTD A + +E
Sbjct: 3228 YAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAANNQEPV 3287
Query: 178 EFRLAE------SVTLSNASEIEDVA 197
F A+ S+ L N + E +
Sbjct: 3288 TFPTAKDPLGQASLRLKNILDTESIV 3313
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D ++P V AL+G I VACG T +T+ G ++
Sbjct: 578 ELYTWGRGNYGRLGH---GNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVF 634
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D ++ V V CG + G+
Sbjct: 635 SWGDGDYGKLGRGGCNGSKT--PKIVDK--------LLDINVAKVYCGGQFSAALTAYGE 684
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +V++L G H LT+
Sbjct: 685 VYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTE 733
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG G +LGH + D PR+V AL G I +A G +H A + KG ++ WG
Sbjct: 4162 IYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 4218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4219 DNDEGQLGDG-------------TTCALQRPRLVHALQGKKITRVACGSAHTLAW 4260
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+VG+LG + D ++P + ++ +F+K VA GG H AL+S+G +Y+
Sbjct: 3950 VYATGYGAVGRLG---IGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4006
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + +Y R P L+ + + VACG H+
Sbjct: 4007 WGEGDDGKLGHGNRL-----------SYDR--PKLIEELLGTEIVDVACGGHHSAAITSA 4053
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4054 GWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL 4102
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT G++Y W
Sbjct: 4109 NVWSWGDGDYGKLGR---GGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTW 4165
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4166 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4213
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4214 VFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHT 4257
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 16/175 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +Y WGL QLG G K LP +L + +A G ++ +G LY
Sbjct: 2908 HSAVYVWGLNDKDQLGGLK---GSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLY 2964
Query: 62 AWGGCQAGQLGLGPQTRS--FSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A G G+LGLG + IP S + + V G H L +D
Sbjct: 2965 ACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVA----------VHSGGKHALALTQD 3014
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
G++ WG G+ + + P ++ + +R +A G GHSA +T + L
Sbjct: 3015 GRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGEL 3069
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV F+ +A G H ALT ++Y+WG G+LG G +
Sbjct: 489 GSETQYPQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDR----- 543
Query: 82 FIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
T++ ++ +V + +ACG +++ +G+++ WG +YG+ + S
Sbjct: 544 -------TWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSD 596
Query: 140 YAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G + +A G G S L
Sbjct: 597 DVMVPTLVSALNGHMIVYVACGSGDSQTL 625
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L P+ + L IK VA GG H ALT G +++
Sbjct: 2963 LYACGEGTNGRLG---LGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFS 3019
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N S + + ++ VACG H+ G++
Sbjct: 3020 WGEGEDGKLGHG----------NCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGEL 3069
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
+ WG YG+ + + P V VG+
Sbjct: 3070 YTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQ 3100
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G + VA G +H A+T G +YAW
Sbjct: 3174 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAW 3230
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G S I N+ + + V V+CG SH++ ++
Sbjct: 3231 GDNDHGQQGNG------STIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3274
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + + G A+T+ G +YA G
Sbjct: 3898 IYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG+G T S +P T +I + V V G H L +G ++
Sbjct: 3955 YGAVGRLGIG-GTDSV-MMP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYS 4006
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4007 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSA 4053
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 25/106 (23%)
Query: 4 DIYTWGLGSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG GQLG C+LQ PR V AL G I VACG HT
Sbjct: 4213 EVFTWGDNDEGQLGDGTTCALQR------PRLVHALQGKKITRVACGSAHT--------- 4257
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
AW +A Q+R + P E D +++P V+ N + L+
Sbjct: 4258 LAWSTMKAT------QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4296
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG +LG+ G + L P + L FI DVACG H+ ALT+ G +YAWG
Sbjct: 98 VYSWGQNCHYELGN---TFGSQALTPAIITNLCNEFIVDVACGSHHSLALTNDGEVYAWG 154
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQ+G T IP R + + V ++CG S ++V +G+++
Sbjct: 155 QNTSGQVGCHDITTLVQDIP-------RKLNFTLTGKKVICISCGDSFSVVVTNNGEVYS 207
Query: 125 WGYNSYGQAANEKSTY-AWYPSPVDWCVGEV-RKLAAGGGHSAVLTD 169
WG N GQ E + ++P + V K+ G H+ L+D
Sbjct: 208 WGRNDVGQLGIENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSD 254
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG VGQLG + + + P R+ AL + I+ V CG +HT AL+ +G LY W
Sbjct: 204 EVYSWGRNDVGQLG--IENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSDEGVLYVW 261
Query: 64 GGCQAGQLGL 73
G GQLGL
Sbjct: 262 GANNYGQLGL 271
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G C + + +PR++ L G + ++CG + +T+ G +Y+
Sbjct: 149 EVYAWGQNTSGQVG-CHDITTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYS 207
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDGK 121
WG GQLG I N ++ F I + V + V CG HTL +G
Sbjct: 208 WGRNDVGQLG----------IENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSDEGV 257
Query: 122 IHGWGYNSYGQAANEK---STYAWYPSPVDWCVGEVRKL 157
++ WG N+YGQ +T W P+ ++ V E+R++
Sbjct: 258 LYVWGANNYGQLGLTTVLLNTNIWKPTKLE--VPEMRRV 294
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 31 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 85
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 86 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 135
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 136 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 186
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
R + +L I I VACG H+ AL+ ++ WG + GQLGLG + S
Sbjct: 3 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-----QTSPQL 57
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
++ +L +P VA G +H+ V G I GWG N +GQ + P+ +
Sbjct: 58 IKS--LLGIP--FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 113
Query: 151 VGE-VRKLAAGGGHSAVLT 168
+ + + G H+A LT
Sbjct: 114 RSQKIVYICCGEDHTAALT 132
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 137 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 193
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 194 GLGGNGQLGTG 204
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG S G+LG+C + L+ R L FI D+ACG H+ ALT++G +YAWG
Sbjct: 98 VYSWGHNSHGELGNCFANNMIPMLVTRN---LSDEFIVDIACGSHHSLALTNEGKVYAWG 154
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMRDG 120
+GQ+G +S N P+ V V ++CG S ++ G
Sbjct: 155 ENTSGQVG-------------KSVNINENTPMKVNSSLAGKTVICISCGQSSSMTVTDTG 201
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDACSL 173
K++GWG N GQ P V G V K+ G H L++ +L
Sbjct: 202 KVYGWGCNDVGQLGIGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGAL 255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG VGQLG + + ++ P +V L G+ I+ + CG H AL++KGALY WG
Sbjct: 203 VYGWGCNDVGQLG---IGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGALYVWG 259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH-SHTLVYMRDG-KI 122
G GQLGLG + S + + + R V VA H +H + M +G +I
Sbjct: 260 GNNYGQLGLGMKMNICSPVQLKQEAMRR----------VLDVATSHYNHISIAMAEGNRI 309
Query: 123 HGWG 126
WG
Sbjct: 310 FMWG 313
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALY 61
+Y G + G LG +GD P++V AL G IK A G G H ALT +G +Y
Sbjct: 45 VYALGSNTSGCLG-----TGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVLALTEEGKVY 99
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN-IPILVVPN----GVQLVACGHSHTLVY 116
+WG G+LG + + N IP+LV N + +ACG H+L
Sbjct: 100 SWGHNSHGELG---------------NCFANNMIPMLVTRNLSDEFIVDIACGSHHSLAL 144
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+GK++ WG N+ GQ + P V+ + + G S+ +T
Sbjct: 145 TNEGKVYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQSSSMT 196
>gi|307214559|gb|EFN89544.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 346
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G+G+ GQLGH L+ D PR + AL G+ I ++ GG H+ +T +G LY W
Sbjct: 181 DVYSMGMGTRGQLGHNDLEDCDN---PRLIEALAGLRIVQISAGGWHSAVVTDQGDLYTW 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +G+LG + +P D V V+ V CG+S T+ DG
Sbjct: 238 GWNTSGELGTESKDTKVHAVPTLIDLKSNEGEDTEV--NVKSVECGNSFTICLSDDGSFW 295
Query: 124 GWGYNSYGQ 132
G G N YGQ
Sbjct: 296 GCGNNKYGQ 304
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 NIPILV-VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
N P+LV VP V+ V A G HT++ +G ++ G + GQ + P ++
Sbjct: 150 NAPVLVEVPKRVKFVDIASGFDHTILLAENGDVYSMGMGTRGQLGHNDLEDCDNPRLIEA 209
Query: 150 CVG-EVRKLAAGGGHSAVLTDACSL 173
G + +++AGG HSAV+TD L
Sbjct: 210 LAGLRIVQISAGGWHSAVVTDQGDL 234
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL ++D+ACG H+ A+TS G LY WG
Sbjct: 3573 VFSWGEGDDGKLGHFSRWNCDK---PRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWG 3629
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + L VQ VACG + TL +GK+
Sbjct: 3630 LGEYGRLGHGDNTTQLK---------PKQVKALAHERVVQ-VACGSRDAQTLALTDEGKV 3679
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG +G+ S P VD
Sbjct: 3680 YSWGDGDFGKLGRGGSEGCNVPHEVD 3705
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
D+YTWGLG G+LGH GD +L P++V AL + VACG T ALT +G
Sbjct: 3624 DLYTWGLGEYGRLGH-----GDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK 3678
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y+WG G+LG G +P+E D R+ V + CG +L +
Sbjct: 3679 VYSWGDGDFGKLGRG--GSEGCNVPHEVDR-LRD-------QKVCQIECGAQFSLALTKS 3728
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P V+ G ++ +A G H +TD+
Sbjct: 3729 GQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDS 3780
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + D+ PR + +L G + D+A GG H+ +T+ G LY W
Sbjct: 4568 EVYSWGEGEDGKLGHGNRSPCDR---PRVIDSLRGKEVVDIAAGGAHSACITANGELYTW 4624
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R + + ACG + TL D
Sbjct: 4625 GKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDM----------ACGSGDAQTLCITDDDN 4674
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P ++ G+ V K+ G S LT + S+
Sbjct: 4675 VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSV 4727
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++Y+WG G+ G+LGH S + + P + G I DVACG T A+T GA+Y
Sbjct: 691 EVYSWGKGNFGRLGHGS---SEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G N+ + I L+ + V+ V CG+ ++ + G
Sbjct: 748 SWGDGDYGKLGRGG---------NDGCKTPKVIEKLMGQDVVR-VYCGNQFSMALTKSGA 797
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTD 169
++ WG + + +A +P ++ +V+ +A G H +T+
Sbjct: 798 VYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE 846
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V AL + DVACG +H A T G +++WG
Sbjct: 4727 VYTWGKGDYHRLGHGS---DDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWG 4783
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +H+L +
Sbjct: 4784 DNDEGQLGDG-------------TTNAIQRPRLVASLLGKKINRVACGSAHSLAW 4825
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH Q+ ++ P + L G + + CG ++ ALTS G +Y+W
Sbjct: 639 EVFSWGNGDGGKLGHGDYQNHEE---PALITGLSGKQVAKICCGSSYSVALTSNGEVYSW 695
Query: 64 GGCQAGQLGLGP---QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G G+LG G QT +F+ I+ V G G + TL G
Sbjct: 696 GKGNFGRLGHGSSEDQTTPMLL------KFFKGHRIVDVACG-----SGDAQTLAVTDSG 744
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG YG+ + P ++ +G+ V ++ G S LT +
Sbjct: 745 AVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKS 795
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P+ + L G + V CG + ALT GA+Y WG
Sbjct: 746 VYSWGDGDYGKLGRGG---NDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWG 802
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+LG G T + P + + + V+ +A G H + DG+++G
Sbjct: 803 KGDNYRLGHG--TEDHARHPKQIEA--------LSSKKVKDIAIGSLHCMAITEDGELYG 852
Query: 125 WGYNSYGQAAN 135
WG N GQ N
Sbjct: 853 WGRNEQGQLGN 863
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D P+++ AL +KD+A G +H A+T G LY WG
Sbjct: 798 VYTWGKGDNYRLGHGT---EDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWG 854
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
+ GQLG N S + F ++ G + VACG + T + G+
Sbjct: 855 RNEQGQLG------------NPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ L G + V CG + ALT G++Y W
Sbjct: 4674 NVWSWGDGDYGKLGRGG---SDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTW 4730
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G SD + R + ++ VACG H + G+
Sbjct: 4731 GKGDYHRLGHG------------SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGE 4778
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + + P V +G ++ ++A G HS
Sbjct: 4779 VFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHS 4822
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 11/169 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ +++ WGL QLG G K LP L + + G +T +G +
Sbjct: 3462 IQTNVFCWGLNDKDQLGG---PKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKV 3518
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG T + S +P + + + + V V G H+L DG
Sbjct: 3519 YACGEATNGRLGLGITTGTVS-VPRQITSLSQYVIKKVA------VHSGGRHSLALTTDG 3571
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
K+ WG G+ + P ++ + VR +A G HSA +T
Sbjct: 3572 KVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAIT 3620
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P ++ ++ +FIK +A GG H AL+++G +Y+WG + G+LG G RS P
Sbjct: 4537 PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG--NRSPCDRPRVI 4594
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
D+ R ++ +A G +H+ +G+++ WG YG+ + S P V
Sbjct: 4595 DS-LRGKEVVD-------IAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLV 4646
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ V +A G G + L
Sbjct: 4647 EALKSYRVVDMACGSGDAQTL 4667
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 17/124 (13%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQ 104
G H LTS G +++WG G+LG G D P L+ V
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-------------DYQNHEEPALITGLSGKQVA 674
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 163
+ CG S+++ +G+++ WG ++G+ + S P + + G + +A G G
Sbjct: 675 KICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGD 734
Query: 164 SAVL 167
+ L
Sbjct: 735 AQTL 738
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 89/222 (40%), Gaps = 57/222 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQ-----SGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++TWG G+ GQLGH S + S +EL PR + +G I + G H+ A+ +G
Sbjct: 7 VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGK 66
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIP------------------------NESDTYF---- 91
LY WG + QLG G + IP +E F
Sbjct: 67 LYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGW 126
Query: 92 ------------------RNIPILV---VPNGVQL--VACGHSHTLVYMRDGKIHGWGYN 128
+IP LV V GV + V CG HT+ +DG+I WG
Sbjct: 127 GGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNG 186
Query: 129 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
YG+ N S P PV++ E + ++AG + +T+
Sbjct: 187 EYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITE 228
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 5 IYTWGLGSV-----GQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSK 57
++TWG G G LGH G+ E +PR V L G+ +K V CG +HT ALT
Sbjct: 121 LFTWGWGGSTMKGSGALGHAG---GEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD 177
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G ++AWG + G+LG G S +F E YF + + ++ G T
Sbjct: 178 GEIWAWGNGEYGRLGNGA---SDNFEVPEPVEYFAD-------ENIASISAGRDFTFAIT 227
Query: 118 RDGKIHGWGYNSYGQ 132
G+++ WG NS+ Q
Sbjct: 228 EHGEVYSWGINSHSQ 242
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 2 HLDIYTWGLGSVGQL---GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
H ++Y+WG+ S QL G ++ + E +P V AL + + V+ G H A+T+ G
Sbjct: 229 HGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDG 288
Query: 59 ALYAWG 64
++ WG
Sbjct: 289 KMFMWG 294
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG H+ LT G L+ +
Sbjct: 210 NIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 267 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGNRVTQIACGRWHTLAYVSDF 313
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 314 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 372
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG ++ P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 157 ELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ +ACG SH+ + +DG
Sbjct: 215 GKNEFGQLGLG-------------HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 262 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 306
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RTFPSTTTP 181
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N +GQ + PS ++
Sbjct: 182 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN 241
Query: 153 E-VRKLAAGGGHSAVLT 168
+ V LA GG HSA+LT
Sbjct: 242 QKVEFLACGGSHSALLT 258
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 1903 VFSWGEGDDGKLGHFSRXNCDK---PRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +LV VQ VACG + TL +G +
Sbjct: 1960 LGEYGRLGHG---------DNTTQLKPKMVKVLVGHRVVQ-VACGSRDAQTLALTDEGLV 2009
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2010 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 2058
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 1954 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2068
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2069 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2128
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2129 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2160
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTW 2951
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 2952 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTE 2998
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P VD G K+ G S LT +
Sbjct: 2999 DDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKS 3051
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G + G+LG + SG + PR+V AL +K VA GG H ALT+ G +++
Sbjct: 1848 VYACGEATNGRLG-LGVSSGTVPV-PRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG FS + + ++ +ACG SH+ G++
Sbjct: 1906 WGEGDDGKLG------HFSRXNCDKPRLIEALK----SRRIRDIACGSSHSAALTSSGEL 1955
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + +T P V VG V ++A G + LTD
Sbjct: 1956 YTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTD 2005
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P +V AL G+ V CG + ALT GA+Y WG
Sbjct: 3002 VWSWGDGDYGKLGR---GGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWG 3058
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3059 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3100
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3101 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3149
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3054 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3110
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3111 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 3152
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 2921
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 2922 ES-LRGIEVVD-------VAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLV 2973
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 2974 EALQGHRVVDVACGSGDAQTL 2994
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + VA G A+T +G +
Sbjct: 1792 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKV 1848
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + +P + + V V G H DG
Sbjct: 1849 YACGEATNGRLGLGVSSGTVP-VPRQVTALSSYVVKKVA------VHSGGRHATALTADG 1901
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 1902 KVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGEL 1955
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 3105 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 3158
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 2790 VYGWGHNHRGQLGGVE---GAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYA-T 2845
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 2846 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 2898
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGL 2948
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G+ + LP R+ L GI + VACG HT AL +G +Y
Sbjct: 465 ELYTWGKECGGRKDNV-----QNTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VY 518
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMR 118
+WG + GQLG+G DT R P+L+ + V CG HTL
Sbjct: 519 SWGSNEYGQLGVG-------------DTRTRYRPVLITHISSKQIVSVVCGAYHTLAITS 565
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D K++ WG+ +GQ + P +D +V + AAG HSAVLT
Sbjct: 566 DYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLT 616
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQLG L+S + +L P+++ LD + A G H+ LTS+ +Y +G
Sbjct: 569 VYSWGWGVHGQLG---LKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFG 625
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + IP D+ + + + L++CG T+ D I
Sbjct: 626 ADLYGQLGIGSHYK--QVIPQLVDS--------LTLDSIYLISCGPFETIAISEDQTIFC 675
Query: 125 WGYN-------------SYGQ--AANEKS-TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG N YG+ A+N K + +YP + + + + ++ G H +L
Sbjct: 676 WGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIIL 735
Query: 168 T 168
T
Sbjct: 736 T 736
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GQLG ++ + P + + I V CG HT A+TS +Y+WG
Sbjct: 517 VYSWGSNEYGQLGVGDTRTRYR---PVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWG 573
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + P + D L+ + V A G++H+ V ++
Sbjct: 574 WGVHGQLGLKSVENQLT--PKQID--------LLDSHKVIQAAAGYAHSAVLTSQRYVYT 623
Query: 125 WGYNSYGQ 132
+G + YGQ
Sbjct: 624 FGADLYGQ 631
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GQLGH + + PR V AL I VA G + A + + AWG
Sbjct: 741 VYTWGYNDCGQLGH---YNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWG 797
Query: 65 GCQAGQLGL 73
G++G+
Sbjct: 798 RNDEGKIGI 806
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG H+ LT G L+ +
Sbjct: 210 NIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 267 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGNRVTQIACGRWHTLAYVSDF 313
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 314 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 372
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG ++ P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 157 ELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ +ACG SH+ + +DG
Sbjct: 215 GKNEFGQLGLG-------------HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 262 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 306
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RTFPSTTTP 181
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N +GQ + PS ++
Sbjct: 182 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDN 241
Query: 153 E-VRKLAAGGGHSAVLT 168
+ V LA GG HSA+LT
Sbjct: 242 QKVEFLACGGSHSALLT 258
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQTHYTNLINDETIA 408
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|403331293|gb|EJY64585.1| hypothetical protein OXYTRI_15384 [Oxytricha trifallax]
Length = 1193
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-----GIFIKDVACGGVHTCALTSKG 58
++Y WG S GQLG C +L P +++ + + IK ++CG HTC ++ +G
Sbjct: 42 EVYVWGDDSHGQLGLC-------DLFPEKLMTVPKTCSFNVVIKSLSCGLSHTCFVSDQG 94
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLV 115
+Y+ G +GQLGL + +N P V V + V+CG HTL
Sbjct: 95 HIYSMGSNSSGQLGL-----------QDRQILSKNTPTNVESLVEYFICQVSCGSEHTLA 143
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G WG +G N +S + P+ V++ + + AG HSA +
Sbjct: 144 ISENGVCFAWGLGKFGALGNGRSDSQYEPNLVNF-QEPIIDVQAGANHSAFI 194
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
IY+ G S GQLG LQ D+++L P V +L FI V+CG HT A++ G
Sbjct: 96 IYSMGSNSSGQLG---LQ--DRQILSKNTPTNVESLVEYFICQVSCGSEHTLAISENGVC 150
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+AWG + G LG G + PN + F+ PI+ V G A + + ++M
Sbjct: 151 FAWGLGKFGALGNGRSDSQYE--PNLVN--FQE-PIIDVQAGANHSAFINKNHALFMS-- 203
Query: 121 KIHGWGYNSYGQ 132
G SYGQ
Sbjct: 204 -----GQGSYGQ 210
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
L++Y+WG G G+LGH + P + AL G+ IK +ACG H A+T G +
Sbjct: 82 RLEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQ 138
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG Q GQLGLG S +P + F I I ++VA G HT DG
Sbjct: 139 SWGRNQNGQLGLG--NTEDSLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGD 188
Query: 122 IHGW 125
++GW
Sbjct: 189 LYGW 192
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E P ++ ALD I V CG HT A + S+ +Y
Sbjct: 32 VCSWGRGEDGQLGH-----GDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVY 86
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
+WG G+LG G N SD F +PI + +GV + +ACG SH L D
Sbjct: 87 SWGWGDFGRLGHG----------NSSD-LFTPLPIKAL-HGVMIKQIACGDSHCLAVTMD 134
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG N GQ + + P + G ++ +AAG H+A +T+
Sbjct: 135 GEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 185
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 133 MDGEVQSWGRNQNGQLG---LGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 189
Query: 61 YAWGG 65
Y W G
Sbjct: 190 YGWDG 194
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV- 98
F ++ G HT LTS G LY WG + GQ+G+G S P+ V
Sbjct: 269 FFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCS-------------PVQVR 315
Query: 99 VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
P+ ++ V+CG HTL + WG + GQ
Sbjct: 316 FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G + + + P +V D + V+CG HT A+T + ++AWG
Sbjct: 289 LYGWGWNKFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 345
Query: 65 GCQAGQLGLG 74
GQLG+G
Sbjct: 346 RGTNGQLGIG 355
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ G+ PR+V+ ++ G H+ AL S + +WG + GQLG G
Sbjct: 1 MAEGEVTPPPRKVLI--------ISAGASHSVALLSGEVVCSWGRGEDGQLGHG------ 46
Query: 81 SFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG-KIHGWGYNSYGQAANE 136
D R+ P + + + V CG HT+ Y + +++ WG+ +G+ +
Sbjct: 47 -------DAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHG 99
Query: 137 KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
S+ + P P+ G ++++A G H +T
Sbjct: 100 NSSDLFTPLPIKALHGVMIKQIACGDSHCLAVT 132
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+WG GQLG + + L G+ V+ G H+ A+ S G YAW
Sbjct: 176 DIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAW 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDG 120
G + GQLG+G +R+ + P LV P GV V+ G H+L DG
Sbjct: 236 GEARGGQLGIGSISRTPA-------------PALVSAPAGVSFTQVSAGDLHSLAVGSDG 282
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
K + WG N GQ N +T + P V G V +++AG HS
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHS 327
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 22/135 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG S GQLG+ S+ +P V DG+ V+ G H+ A+ S G YAW
Sbjct: 69 NIYAWGYNSSGQLGNNSIL---NSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAW 125
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQL--VACGHSHTLVYM 117
G G+LG G T S ++P+LV VP+GV + V G H+L
Sbjct: 126 GRNTDGRLGNGTSTGS-------------SVPLLVSAGAVPSGVTISQVMAGGFHSLAVG 172
Query: 118 RDGKIHGWGYNSYGQ 132
+G I+ WGYN GQ
Sbjct: 173 SNGDIYSWGYNRSGQ 187
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y WG GQLG+ + S L P V + G+ + V+ G H+ A+ + G YAWG
Sbjct: 285 YAWGNNDSGQLGNATTTS---SLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGL 341
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGHSHTLVYMRDGKI 122
GQLG T S +P++V P+GV + G H+L D
Sbjct: 342 NVNGQLGNNTITTS-------------TVPVMVTAPDGVTFTRIEAGGLHSLTAASDENT 388
Query: 123 HGWGYNSYGQAANEKSTYAWYP 144
+ WG NS+GQ N S + P
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVP 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
L G+ V+ G H+ A+ S G +YAWG +GQLG + ++P
Sbjct: 46 LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLG-------------NNSILNSSVP 92
Query: 96 ILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
+LV P+GV V+ G H+L DG + WG N+ G+ N ST + P
Sbjct: 93 VLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVP 144
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
V+ G +H+L DG I+ WGYNS GQ N + P V G +++AG HS
Sbjct: 54 VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQAHYTNLINDETIA 408
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNEFGQLGLGHTESKD---YPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGNRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAGGNQSILL 373
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N +GQ + YPS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDN 242
Query: 153 -EVRKLAAGGGHSAVLTD 169
EV LA GG HSA+LT
Sbjct: 243 QEVEFLACGGSHSALLTQ 260
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ +ACG SH+ + +DG
Sbjct: 216 GKNEFGQLGLG-------------HTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 307
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D ++ WG + G +L + P V L I VA GG H+ A+ + G
Sbjct: 47 VHADGSVWAWGASASGLREEGALS---RRFAPVPVPGLSDIV--SVAAGGAHSLAVRADG 101
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYM 117
L+ WGG GQLG + T R +P+ V +GV+ VA G H+L
Sbjct: 102 TLWTWGGNPYGQLG-------------DGTTTARALPVQVAGLSGVRAVATGLGHSLALR 148
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
DG + WG N +GQ + ++ P P+ G VR +AAGG HS V+ D
Sbjct: 149 ADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG-VRSVAAGGFHSLVVRD 199
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL GQLG + + L PR + L G+ + VA GG H+ + ++AWG
Sbjct: 153 VWAWGLNQFGQLGDGTTS---QWLTPRPIPGLSGV--RSVAAGGFHSLVVRDDDTVWAWG 207
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G +R +P R IP L V VA G H+L DG +
Sbjct: 208 SNDYGELGDGSTSRRA--VP-------RAIPGL---RNVASVAGGCYHSLAVHADGTLSA 255
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG NSYGQ + + P PV
Sbjct: 256 WGLNSYGQLGDGTFSNRATPRPV 278
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D + WGL S GQLG + PR V L G+ + VA H+ AL ++G
Sbjct: 247 VHADGTLSAWGLNSYGQLGDGTFS---NRATPRPVPGLSGV--RCVATSFFHSLALRAEG 301
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++AWG G+ G G +R +S T R +P L +GV VA G H+L
Sbjct: 302 TVWAWGLNGYGEQGDGTASR-------QSPTP-RPVPGL---SGVLSVATGTFHSLAVNT 350
Query: 119 DGKIHGWGYNSYGQAANEKSTY 140
+G + WG+N GQ + +T+
Sbjct: 351 NGTVSAWGHNGQGQLGDGTATH 372
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQTHYTNLINDETIA 408
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 4 DIYTWGLGSVGQLGH--------CSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCAL 54
+ Y+WGL GQLG C Q + ++L P+R+ L+G+ I VACG H+ A+
Sbjct: 1740 EAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAM 1799
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFS-FIPNESDTYFRNIPILVVPNG-----VQLVAC 108
T G +Y WG GQLGLG SF + E + I NG + + C
Sbjct: 1800 TKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEI----NGLKHEKISKIIC 1855
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQ 132
G + TL G ++G G N GQ
Sbjct: 1856 GATFTLFQTDKGDLYGCGVNDLGQ 1879
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 34/169 (20%)
Query: 5 IYTWGLGSVGQLG---------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT 55
+++ G + GQLG H S K L PR +++L I++V CG HT +
Sbjct: 1590 LFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMVIN 1649
Query: 56 SKGALYAWGGCQAGQLGLG---PQTRSFSF-----IPNESDTYF--------------RN 93
G ++ WG Q GQLGLG PQ S + I ++ Y +N
Sbjct: 1650 MSGQVFVWGANQTGQLGLGDNSPQILSAGYEHSIAITKSNELYIWGSGGLCGIGTLKQQN 1709
Query: 94 IPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
P+ + + + CG HT+ +D + + WG GQ +ST
Sbjct: 1710 APVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQST 1758
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 22/185 (11%)
Query: 5 IYTWGLGSVGQLGHC----SLQSG-----DKELLPRRVVALDGIFIKDVACGGVHTCALT 55
IY WG + GQLG S + G K P+ + L I + CG T T
Sbjct: 1805 IYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQT 1864
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNE----------SDTYFRNIPILVVPNGVQL 105
KG LY G GQLGL E SD I +
Sbjct: 1865 DKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQ 1924
Query: 106 VACGHSHTLVYMRDG--KIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGG 162
+ACG SH+L DG + WG GQ + T P PV C +++++A G
Sbjct: 1925 IACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSM 1984
Query: 163 HSAVL 167
HS L
Sbjct: 1985 HSVAL 1989
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 29/135 (21%)
Query: 4 DIYTWGLGSVGQLGH---------CSLQSGDKE--------LLPRRVVALDGIFIKDVAC 46
D+Y G+ +GQLG SL+ K +LP RV+ GI I +AC
Sbjct: 1868 DLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIAC 1927
Query: 47 GGVHTCALTSKG--ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ 104
G H+ A++ G L+AWG + GQLGLG T + P +S + + +Q
Sbjct: 1928 GESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQS----------LCSSQIQ 1977
Query: 105 LVACGHSHTLVYMRD 119
+ACG H++ + D
Sbjct: 1978 RIACGSMHSVALIGD 1992
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQTHYTNLINDETIA 408
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQTHYTNLINDETIA 408
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLGH + P V ALD I V+CG H+ A+ +G ++AWG
Sbjct: 54 VYTCGSNGCGQLGHNKPGTS-----PELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWG 108
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG T + IP R I L + + V CG+ H + +DG++
Sbjct: 109 AGDGGQLGLG-TTEAAVRIP-------RLIKRL-CDHRIAQVMCGNQHCIALSKDGQLFT 159
Query: 125 WGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N+ GQ K +P P+ G + K+ AGG HS L+
Sbjct: 160 WGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALS 205
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S ELLPRRV+ L G + + CG HT A S G +YA+
Sbjct: 304 LFTFGDGSWGQLGH---GSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAF 360
Query: 64 GGCQAGQLGLG 74
GG GQLG G
Sbjct: 361 GGNSHGQLGTG 371
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 20/114 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG + GQLG L G+ +L P+ + +L GI + + GG H+ AL+ GA++
Sbjct: 156 QLFTWGQNTSGQLG---LGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFG 212
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHT 113
WG +AGQLGL +D R +P + V ++CG HT
Sbjct: 213 WGKNKAGQLGL-------------NDIQDRAVPCHIKFLRSQKVVHISCGDEHT 253
>gi|348683252|gb|EGZ23067.1| hypothetical protein PHYSODRAFT_479839 [Phytophthora sojae]
Length = 883
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+++TWG S G+LG+ + GD + P+RV+AL I VACG HT G +Y
Sbjct: 541 NLFTWGDCSGGRLGY-DIADGDSRRVSCPQRVLALQHQTIVQVACGAFHTLVTDLNGHVY 599
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
AWG GQLG P S T ++ G + VACG H+L D
Sbjct: 600 AWGSNSRGQLGF--------LSPGSSCTTVEAPSVVADLRGTYMSSVACGEYHSLALSSD 651
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPV----DWCV--------------GEVRKLAAGG 161
G++ WG N YG+ P DW +R++AAG
Sbjct: 652 GRVFSWGCNKYGKLGRRTEGLLDMVQPRQLDGDWTAWSMDMKSRIGSGDRSVIRRVAAGK 711
Query: 162 GHSAVLT 168
HS +T
Sbjct: 712 DHSLAIT 718
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG S GQLG S S + VVA L G ++ VACG H+ AL+S G +++W
Sbjct: 598 VYAWGSNSRGQLGFLSPGSSCTTVEAPSVVADLRGTYMSSVACGEYHSLALSSDGRVFSW 657
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESD---TYFRNIPILVVPNG----VQLVACGHSHTLVY 116
G + G+LG + P + D T + + +G ++ VA G H+L
Sbjct: 658 GCNKYGKLGRRTEGLLDMVQPRQLDGDWTAWSMDMKSRIGSGDRSVIRRVAAGKDHSLAI 717
Query: 117 MRDGKIHGWGYNSYGQ 132
DG WG GQ
Sbjct: 718 TSDGAGFTWGRGDSGQ 733
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ V+ G A+T G L+ WG C G+LG + + D+ + P V+
Sbjct: 523 VVQVSGGQRFFAAVTEDGNLFTWGDCSGGRLG---------YDIADGDSRRVSCPQRVLA 573
Query: 101 ---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ VACG HTLV +G ++ WG NS GQ
Sbjct: 574 LQHQTIVQVACGAFHTLVTDLNGHVYAWGSNSRGQ 608
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR---------------RVVALDGIFIKDVACGGV 49
+++WG G+LG + D + PR R+ + D I+ VA G
Sbjct: 654 VFSWGCNKYGKLGRRTEGLLDM-VQPRQLDGDWTAWSMDMKSRIGSGDRSVIRRVAAGKD 712
Query: 50 HTCALTSKGALYAWGGCQAGQLGLG 74
H+ A+TS GA + WG +GQLG G
Sbjct: 713 HSLAITSDGAGFTWGRGDSGQLGHG 737
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAE--PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 268 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVL 377
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 378 ---CSTYENSSPAVDFRTVNQAHYTNLINDETIA 408
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG+G G+LG + P + L GI ++ G HT AL + G L++WG
Sbjct: 106 VWTWGVGYSGELGD---GTNSLRTTPAPINGLTGI--TAISAGWNHTLALKADGTLWSWG 160
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
Q GQLG G T S NIP L VP G+ ++ G H+LV DG +
Sbjct: 161 QNQYGQLGTGNTTNS-------------NIP-LQVPGQIGITSISSGGGHSLVIKNDGTV 206
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL-TDACSLKELCEFR 180
WG N++GQ N ++ P + G + ++AG HS L +D C FR
Sbjct: 207 WSWGCNNFGQLGNGTNSNNPTPHQISGLNG-IINVSAGVIHSTALKSDGTVWNWGCNFR 264
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G LG + + + P +V L+GI ++ G H AL S G ++ WG
Sbjct: 56 VWSWGFNQNGHLGDGTTSNSNS---PVQVKGLNGI--TAISAGWAHFVALKSDGTVWTWG 110
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LG G + + P T G+ ++ G +HTL DG +
Sbjct: 111 VGYSGELGDGTNSLRTTPAPINGLT------------GITAISAGWNHTLALKADGTLWS 158
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N YGQ +T + P V +G + +++GGGHS V+ +
Sbjct: 159 WGQNQYGQLGTGNTTNSNIPLQVPGQIG-ITSISSGGGHSLVIKN 202
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + + + +P +V GI ++ GG H+ + + G +++WG
Sbjct: 156 LWSWGQNQYGQLGTGNTTNSN---IPLQVPGQIGI--TSISSGGGHSLVIKNDGTVWSWG 210
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S + P++ NG+ V+ G H+ DG +
Sbjct: 211 CNNFGQLGNG--TNSNNPTPHQISGL----------NGIINVSAGVIHSTALKSDGTVWN 258
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
WG N G+ AN ++ P + G + A SA+ +D
Sbjct: 259 WGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDG 304
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 43/166 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG+ + P ++ L+GI +V+ G +H+ AL S G ++ WG
Sbjct: 206 VWSWGCNNFGQLGN---GTNSNNPTPHQISGLNGII--NVSAGVIHSTALKSDGTVWNWG 260
Query: 65 GCQAGQLGLGPQTRSF---------------------SFIPNESDTYFRNI--------- 94
G+L G + S+ S I ++ + +
Sbjct: 261 CNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNG 320
Query: 95 -------PILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
P+ V +G+ + G ++T+ DG I +G N+YGQ
Sbjct: 321 SKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQ 366
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G LG L + L+P +V ++G+ + VACG HT +++S G LY +
Sbjct: 181 ELYGWGWGRYGNLG---LGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTY 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + P++ + N+ + ++ G HT+ DGK++
Sbjct: 238 GWSKYGQLGHGDFEDHLT--PHKLEALQENL--------ISEISGGWRHTMALTSDGKLY 287
Query: 124 GWGYNSYGQ 132
GWG+N +GQ
Sbjct: 288 GWGWNKFGQ 296
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + + L+P+++ A G+ +K VA G HT A+T G L
Sbjct: 126 MDGEVQSWGRNQNGQLG---LGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 182
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMR 118
Y WG + G LGLG R+ +P + T GV++ VACG HT+
Sbjct: 183 YGWGWGRYGNLGLG--DRNDRLVPEKVSTV----------EGVKMVKVACGWRHTISVSS 230
Query: 119 DGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 231 SGGLYTYGWSKYGQ 244
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG C L P+ + AL G+ IK +ACG H A+T G + +WG
Sbjct: 90 VYSWG---------CDL------FTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWG 134
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG T S +P + F+ + V++VA G HT DG+++G
Sbjct: 135 RNQNGQLGLG--TTEDSLVPQKIQA-FQGVS-------VKMVAAGAEHTAAVTEDGELYG 184
Query: 125 WGYNSYG 131
WG+ YG
Sbjct: 185 WGWGRYG 191
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L P ++ AL I +++ G HT ALTS G LY WG
Sbjct: 234 LYTYGWSKYGQLGHGDFED---HLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWG 290
Query: 65 GCQAGQLGLGPQTRSFSFI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ GQ+G+G S + P+E V ++CG HTL
Sbjct: 291 WNKFGQVGVGDNVDHCSPVQVKFPHEQK--------------VVHISCGWRHTLAVTERQ 336
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ + +S P ++
Sbjct: 337 NVFSWGRGTNGQLGHGESIDRNIPKMIE 364
>gi|301098611|ref|XP_002898398.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105169|gb|EEY63221.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 884
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 33/186 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ TWG S G+LG+ ++ GD +P+RV+AL G I V+CG HT G ++A
Sbjct: 543 LLTWGDSSGGRLGY-TIADGDSRRVSIPQRVLALQGHTIIQVSCGAFHTLVTDLNGHVFA 601
Query: 63 WGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
WG GQLG L P T S + E+ T ++ GV + VACG H+L D
Sbjct: 602 WGSNSKGQLGFLSPGTPSTAV---ETPTVVGDL------RGVYMSSVACGEYHSLALSSD 652
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSP----VDWC---------VGE-----VRKLAAGG 161
G++ WG N YG+ P DW +G VR++AAG
Sbjct: 653 GRVFSWGCNKYGKLGRVAEGLLDMVQPRHINADWTGWAMETKSRIGSGDRYAVRRIAAGK 712
Query: 162 GHSAVL 167
HS +
Sbjct: 713 DHSLAI 718
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I V+CG ++T G L WG G+LG + + D+ +IP V+
Sbjct: 524 IVHVSCGQRFFASVTEDGHLLTWGDSSGGRLG---------YTIADGDSRRVSIPQRVLA 574
Query: 101 ---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGE 153
+ + V+CG HTLV +G + WG NS GQ + ST P+ VG+
Sbjct: 575 LQGHTIIQVSCGAFHTLVTDLNGHVFAWGSNSKGQLGFLSPGTPSTAVETPT----VVGD 630
Query: 154 VR-----KLAAGGGHSAVLT 168
+R +A G HS L+
Sbjct: 631 LRGVYMSSVACGEYHSLALS 650
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G G+LGH + S DK PR + +L I+D+ACG H+ A+TS G LY WG
Sbjct: 3367 IFSWGEGEDGKLGHGNSVSLDK---PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3423
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V V VACG + T+ D
Sbjct: 3424 LGEYGRLGHG-------------DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3470
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P +D G V ++ G S LT
Sbjct: 3471 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3520
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + D+ P+ + L G I D+ACGG H+ A+TS G LY WG
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4456
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G + E+ ++ I VACG + TL D +
Sbjct: 4457 KGRYGRLGHGDSEDQLTPKLVEALQDYKVID----------VACGSGDAQTLCVTDDDNV 4506
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG YG+ S P ++ G V K+ G S LT
Sbjct: 4507 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4553
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD ++ P+ V +L G + VACG T ALT+ G+
Sbjct: 3418 ELYTWGLGEYGRLGH-----GDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGS 3472
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
+Y+WG G+LG G ++ P+L+ GV + CG +L
Sbjct: 3473 VYSWGDGDFGKLGRGGSDGCYT-------------PLLIDRLNGLGVVQIECGAQFSLAL 3519
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ G++ WG Y + + + P+ V+ G +V +A G H +TD
Sbjct: 3520 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDT 3574
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LGH GD+ P+ V AL I +ACG ++ L+S G LY
Sbjct: 526 VYSWGNGDGGRLGH-----GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYT 580
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACGH--SHTLVYM 117
WG G+LG G SD IP LV NG V VACG S TL
Sbjct: 581 WGRGNYGRLGHG-----------NSDNVL--IPTLVTALNGHMVVHVACGSGDSQTLCVT 627
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG +YG+ + P VD + V K+ GG SA LT
Sbjct: 628 ASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALT 679
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G+ G+LG C D P+ V L I + V CGG + ALT+ G +Y
Sbjct: 632 VFSWGDGNYGKLGRGGC-----DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYT 686
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + +LG G NE + + ++ V+ + G+ H L D +
Sbjct: 687 WGKGEGYRLGHG----------NEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLV 736
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 737 YGWGRNDYGQ 746
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D L+P V AL+G + VACG T +T+ G ++
Sbjct: 577 ELYTWGRGNYGRLGH---GNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVF 633
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D ++ V V CG + G+
Sbjct: 634 SWGDGNYGKLGRGGCDGSKT--PKIVDK--------LLDINVAKVYCGGQFSAALTAYGE 683
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +V++L G H LT+
Sbjct: 684 VYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTE 732
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG G +LGH + D PR+V AL G I +A G +H A T KG ++ WG
Sbjct: 4558 IYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4614
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4615 DNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4656
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +Y WGL QLG G K LP L + +A G ++ +G LY
Sbjct: 3258 HSAVYVWGLNDKDQLGGLK---GSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 3314
Query: 62 AWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A G G+LGLG + IP S + + V G H L +D
Sbjct: 3315 ACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMA----------VHSGGKHALALTQD 3364
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GKI WG G+ + S P ++ + +R +A G GHSA +T + L
Sbjct: 3365 GKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3419
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P + L+G+ + + CG + ALT G ++ WG
Sbjct: 3473 VYSWGDGDFGKLGR---GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWG 3529
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3530 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3577
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTD 169
+ WG N +GQ N + PS V + V +++ G HS VLTD
Sbjct: 3578 YAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3627
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4505 NVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTW 4561
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4562 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4609
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4610 VFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4653
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG + D ++P + ++ +F+K VA GG H AL+S+G +Y+
Sbjct: 4346 VYATGYGAAGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4402
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + + P L+ + + +ACG H+
Sbjct: 4403 WGEGDDGKLGHG-------------NRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4449
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4450 GWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL 4498
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV + +A G H ALT ++Y+WG G+LG G
Sbjct: 488 GSETQYPQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHG------- 540
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
D + + P LV V + +ACG +++ V +G+++ WG +YG+ + S
Sbjct: 541 ------DRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNS 594
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 595 DNVLIPTLVTALNGHMVVHVACGSGDSQTL 624
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L P+ + L IK +A GG H ALT G +++
Sbjct: 3313 LYACGEGTNGRLG---LGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFS 3369
Query: 63 WGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG G I + R+I ACG H+ G
Sbjct: 3370 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDI------------ACGSGHSAAITSSG 3417
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+++ WG YG+ + + P V VG+ A G A
Sbjct: 3418 ELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDA 3462
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G + VA G +H A+T G +YAW
Sbjct: 3524 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAW 3580
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G S I N+ + + V V+CG SH++ ++
Sbjct: 3581 GDNDHGQQGNG------STIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3624
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + + G A+T+ G +YA G
Sbjct: 4294 IYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AG+LG+G T S +P T +I + V V G H L +G ++
Sbjct: 4351 YGAAGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYS 4402
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4449
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G +LGH G++E + P+ + L +K++ G H ALT +Y
Sbjct: 683 EVYTWGKGEGYRLGH-----GNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVY 737
Query: 62 AWGGCQAGQL 71
WG GQ+
Sbjct: 738 GWGRNDYGQI 747
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4609 EVFTWGDNDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAW 4656
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+A Q+R + P E D +++P V+ N + L+
Sbjct: 4657 STMKAT------QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4692
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 47 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 104
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 105 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 154
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ L + L
Sbjct: 155 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 205
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQ 70
GS GQLG + + D +PR + L+ I V+CG H AL + G + WG GQ
Sbjct: 1 GSDGQLG--LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 58
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYN 128
LGLG + F S R++ G+ L VA G +H+ G + GWG N
Sbjct: 59 LGLGKE-----FPSQTSPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMN 107
Query: 129 SYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GQ P V +V ++ G H+AVLT +
Sbjct: 108 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT AL S G +YA+
Sbjct: 153 VFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 209
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 210 GCGAKGQLGTG 220
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 101 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 157
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +E + R + + ++ + V +ACG HTL + G I+
Sbjct: 158 AGSCGQLG-------HDSVNDEVNP--RRV-LELMGSEVTQIACGRQHTLALVPSSGLIY 207
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGE--------------VRKLAAGGGHSAVL 167
+G + GQ + PSPV W V+++ +GG + VL
Sbjct: 208 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 267
Query: 168 TDACSLKE----LCEFRLAESVTLSNASEIEDVA 197
CS E +FR +N E +A
Sbjct: 268 ---CSTYENSSPAVDFRTVNQTHYTNLINDETIA 298
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + +P+ + AL G I VACG HT A+T G L+++
Sbjct: 87 EVYSWGWGDFGRLGHGDC---NDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSF 143
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG T S + +P ++ + V +ACG H+L G +
Sbjct: 144 GRNQNGQLGLG--TTSDAILPQPVES--------LRGQEVTSIACGGEHSLAATSAGDVF 193
Query: 124 GWGYNSYGQ 132
WG+ YG
Sbjct: 194 AWGWGRYGN 202
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G G LG + + LP +V L+G+ + VACG H+ A GA+Y +
Sbjct: 191 DVFAWGWGRYGNLG---VGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTF 247
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G ES R + L+A G HT GK++
Sbjct: 248 GWSKYGQLGHGDCIDQLVPKAVESLKDSR----------IVLIAGGWRHTSAADDSGKLY 297
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
WG+N +GQ +T + P PV V+ L+ G H+ +T+A
Sbjct: 298 SWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEA 345
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YT+G GQLGH GD +L+P+ V +L I +A G HT A G LY+
Sbjct: 244 VYTFGWSKYGQLGH-----GDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYS 298
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG+G T S + +P + P V+L++CG HT G +
Sbjct: 299 WGWNKFGQLGIGSNTDSNAPVPVQG---LNTSP-------VKLLSCGWRHTFAVTEAGDV 348
Query: 123 HGWGYNSYGQ 132
WG GQ
Sbjct: 349 FSWGRGVNGQ 358
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++++G GQLG L + +LP+ V +L G + +ACGG H+ A TS G ++AW
Sbjct: 139 ELFSFGRNQNGQLG---LGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G + G LG+GP P + R++P V GV++ VACG H++ G
Sbjct: 196 GWGRYGNLGVGP--------PED-----RHLPSQVHGLEGVKVTSVACGWRHSIAADETG 242
Query: 121 KIHGWGYNSYGQ 132
++ +G++ YGQ
Sbjct: 243 AVYTFGWSKYGQ 254
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS-KGALYAWGG 65
+WG G GQLGH + K PR + L V G ++ AL+ + +Y+WG
Sbjct: 37 SWGRGEDGQLGHGDAEERKK---PRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGW 93
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G F IP + I L N V+ VACG +HTL G++ +
Sbjct: 94 GDFGRLGHGDCNDVF--IP-------QPIRALAGRNIVK-VACGDTHTLAVTDTGELFSF 143
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G N GQ ++ A P PV+ G EV +A GG HS T A
Sbjct: 144 GRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSA 189
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G G+LGH + S DK PR + +L I+D+ACG H+ A+TS G LY WG
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDK---PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3418
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V V VACG + T+ D
Sbjct: 3419 LGEYGRLGHG-------------DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3465
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P +D G V ++ G S LT
Sbjct: 3466 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3515
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G+ G+LG C D P+ V L I + V CGG + ALT+ G +Y
Sbjct: 624 VFSWGDGNYGKLGRGGC-----DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYT 678
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + +LG G NE + + ++ P V+ + G+ H L D +
Sbjct: 679 WGKGEGYRLGHG----------NEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLV 728
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 729 YGWGRNDYGQ 738
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + D+ P+ + L G I D+ACGG H+ A+TS G LY WG
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4423
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G + E+ ++ I VACG + TL D +
Sbjct: 4424 KGRYGRLGHGDSEDQLTPKLVEALQDYKVID----------VACGSGDAQTLCVTDDDNV 4473
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG YG+ S P ++ G V K+ G S LT
Sbjct: 4474 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4520
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD ++ P+ V +L G + VACG T ALT+ G+
Sbjct: 3413 ELYTWGLGEYGRLGH-----GDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGS 3467
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
+Y+WG G+LG G ++ P+L+ GV + CG +L
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYT-------------PLLIDRLNGLGVVQIECGAQFSLAL 3514
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ G++ WG Y + + + P+ V+ G +V +A G H +TD
Sbjct: 3515 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDT 3569
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LGH GD+ P+ V AL I +ACG ++ L+S G LY
Sbjct: 518 VYSWGNGDGGRLGH-----GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYT 572
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACGH--SHTLVYM 117
WG G+LG G SD IP LV NG V VACG S TL
Sbjct: 573 WGRGNYGRLGHG-----------NSDNVL--IPTLVTALNGHMVVYVACGSGDSQTLCVT 619
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG +YG+ + P VD + V K+ GG SA LT
Sbjct: 620 ASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALT 671
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG G +LGH + D PR+V AL G I +A G +H A T KG ++ WG
Sbjct: 4525 IYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4581
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4582 DNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4623
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +Y WGL QLG G K LP L + +A G ++ +G LY
Sbjct: 3253 HSAVYVWGLNDKDQLGGLK---GSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 3309
Query: 62 AWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A G G+LGLG + IP S + + V G H L +D
Sbjct: 3310 ACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVA----------VHSGGKHALALTQD 3359
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GKI WG G+ + S P ++ + +R +A G GHSA +T + L
Sbjct: 3360 GKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P + L+G+ + + CG + ALT G ++ WG
Sbjct: 3468 VYSWGDGDFGKLGR---GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWG 3524
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3525 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3572
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTD 169
+ WG N +GQ N + PS V + V +++ G HS VLTD
Sbjct: 3573 YAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3622
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4472 NVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTW 4528
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4529 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4576
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4577 VFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4620
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG + D ++P + ++ +F+K VA GG H AL+S+G +Y+
Sbjct: 4313 VYATGYGAAGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4369
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + + P L+ + + +ACG H+
Sbjct: 4370 WGEGDDGKLGHG-------------NRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4416
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4417 GWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL 4465
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L P+ + L IK VA GG H ALT G +++
Sbjct: 3308 LYACGEGTNGRLG---LGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFS 3364
Query: 63 WGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG G I + R+I ACG H+ G
Sbjct: 3365 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDI------------ACGSGHSAAITSSG 3412
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+++ WG YG+ + + P V VG+ A G A
Sbjct: 3413 ELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDA 3457
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV + +A G H ALT ++Y+WG G+LG G
Sbjct: 480 GSETQYPQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHG------- 532
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
D + + P LV V + +ACG +++ V +G+++ WG +YG+ + S
Sbjct: 533 ------DRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNS 586
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 587 DNVLIPTLVTALNGHMVVYVACGSGDSQTL 616
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G + VA G +H A+T G +YAW
Sbjct: 3519 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAW 3575
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G S I N+ + + V V+CG SH++ ++
Sbjct: 3576 GDNDHGQQGNG------STIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3619
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + + G A+T+ G +YA G
Sbjct: 4261 IYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AG+LG+G T S +P T +I + V V G H L +G ++
Sbjct: 4318 YGAAGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYS 4369
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4370 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4416
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G +LGH G++E + P+ + L +K++ G H ALT +Y
Sbjct: 675 EVYTWGKGEGYRLGH-----GNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVY 729
Query: 62 AWGGCQAGQL 71
WG GQ+
Sbjct: 730 GWGRNDYGQI 739
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4576 EVFTWGDNDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAW 4623
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+A Q+R + P E D +++P V+ N + L+
Sbjct: 4624 STMKAT------QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4659
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG H+ LT G L+ +
Sbjct: 136 NIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 192
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 193 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGNRVTQIACGRWHTLAYVSDF 239
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 240 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 298
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 83 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 140
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ +ACG SH+ + +DG
Sbjct: 141 GKNEFGQLGLG-------------HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDG 187
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 188 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN------GVQL--VACG 109
G L+AWG GQLG+G R P P GV L ++ G
Sbjct: 82 GELFAWGQNLHGQLGVG-----------------RKFPSTTTPQIVEHLAGVPLAQISAG 124
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+H++ G I+ WG N +GQ + PS ++ + V LA GG HSA+LT
Sbjct: 125 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 184
Query: 169 D 169
Sbjct: 185 Q 185
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG H+ LT G L+ +
Sbjct: 144 NIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTF 200
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 201 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGNRVTQIACGRWHTLAYVSDF 247
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 248 GKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 306
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 91 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ +ACG SH+ + +DG
Sbjct: 149 GKNEFGQLGLG-------------HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDG 195
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 196 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHT 240
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 32/152 (21%)
Query: 30 PRRVVALD----GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
PRR+ L+ G+ + V G A T G L+AWG GQLG+G
Sbjct: 60 PRRLAVLERGGAGVQVHQVLAGS--GGARTPSGELFAWGQNLHGQLGVG----------- 106
Query: 86 ESDTYFRNIPILVVPN------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
R P P GV L ++ G +H++ G I+ WG N +GQ
Sbjct: 107 ------RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH 160
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ PS ++ + V LA GG HSA+LT
Sbjct: 161 TESKDSPSLIEALDNQKVEFLACGGSHSALLT 192
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG+ + Q +P +V L I + G H+ AL++ G ++AWG
Sbjct: 154 VWSWGENIYGQLGNGTNQDSS---IPTKVEFLSNIVA--IEAGAEHSLALSNDGKVWAWG 208
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G +S NIP LV ++++A G +H+L DG I
Sbjct: 209 RNEFGQLGNGETEKS-------------NIPRLVKNLENIEMIAGGDNHSLALDHDGAIW 255
Query: 124 GWGYNSYGQAANEKSTY------------AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WGYNS GQ + S P ++ G+V++++AG HS LT+
Sbjct: 256 AWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTE 313
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + K +PR V L+ I + +A G H+ AL GA++AWG
Sbjct: 204 VWAWGRNEFGQLGNGETE---KSNIPRLVKNLENIEM--IAGGDNHSLALDHDGAIWAWG 258
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG----VQLVACGHSHTLVYMRDG 120
GQ+G G S + + RN V NG V+ V+ G H+ +G
Sbjct: 259 YNSNGQIGDGS---SNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENG 315
Query: 121 KIHGWGYNSYGQAAN 135
+++ WG+N YGQ N
Sbjct: 316 EVYAWGWNEYGQLGN 330
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++ WG S G++ + G P ++ L I V+ G VH+ AL GA++
Sbjct: 102 HGTVWGWGYNSKGEI----TEGGKNIARPVQINGLKDIV--QVSTGLVHSLALDQSGAVW 155
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG GQLG G T S IP + + + NI + G H+L DGK
Sbjct: 156 SWGENIYGQLGNG--TNQDSSIPTKVE-FLSNIV---------AIEAGAEHSLALSNDGK 203
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WG N +GQ N ++ + P V + + +A G HS L
Sbjct: 204 VWAWGRNEFGQLGNGETEKSNIPRLVK-NLENIEMIAGGDNHSLAL 248
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 5 IYTWGLGSVGQLGHCS--LQSGDKELLPRR----VVALDGIF--IKDVACGGVHTCALTS 56
I+ WG S GQ+G S + D +L +R V L+G++ +K V+ G H+ ALT
Sbjct: 254 IWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTE 313
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G +YAWG + GQLG G S + N V + + G H+
Sbjct: 314 NGEVYAWGWNEYGQLGNGSMKDSKVPLRNN------------VGRSIIDIETGSYHSFAV 361
Query: 117 MRDGKIHGWGYNSYGQ 132
G I+ WG +YGQ
Sbjct: 362 DESGVIYAWGDATYGQ 377
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG+ S++ D ++ R V G I D+ G H+ A+ G +YAW
Sbjct: 316 EVYAWGWNEYGQLGNGSMK--DSKVPLRNNV---GRSIIDIETGSYHSFAVDESGVIYAW 370
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
G GQLG G +F N R PI++ N
Sbjct: 371 GDATYGQLGDG----TFGKDGNRITYMVRMNPIVIKIN 404
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 35/173 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-----RVVALDGIFIKDVACGGVHTCALTSKGA 59
++T G +VGQLG+ + + D + VV+LD D+ HT A+T G
Sbjct: 55 VWTTGRNNVGQLGNGTEK--DSSYFGKVDELYDVVSLD----SDMD----HTLAITKHGT 104
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVY 116
++ WG G++ G +NI V NG++ V+ G H+L
Sbjct: 105 VWGWGYNSKGEITEGG----------------KNIARPVQINGLKDIVQVSTGLVHSLAL 148
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ G + WG N YGQ N + + P+ V++ + + + AG HS L++
Sbjct: 149 DQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEF-LSNIVAIEAGAEHSLALSN 200
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 31 RRVVALDGIFIKD--------VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
++ V D +F K+ + GG + L S G ++ G GQLG G + S
Sbjct: 18 QQAVQEDALFPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDS--- 74
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+YF + L V + HTL + G + GWGYNS G+
Sbjct: 75 ------SYFGKVDELY---DVVSLDSDMDHTLAITKHGTVWGWGYNSKGE 115
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
++ WG S GQLG D R VA+ G+ + +A GGVHTCALTS G +
Sbjct: 496 VWCWGRNSSGQLG-------DGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVM 548
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T R+ P+ V +P+GV +A G HT
Sbjct: 549 CWGANWSGQLGDGTTTA-------------RSTPVAVSGLPSGVMAIAAGDLHTCALTSS 595
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG NS GQ + +T P V V +AAG H+ LT +
Sbjct: 596 GGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCALTSS 646
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG S GQLG D R VA+ G+ + +A G HTCALTS G ++
Sbjct: 598 VWCWGANSSGQLG-------DGTTTARSTPVAVSGLPSGVTAIAAGSFHTCALTSSGGVW 650
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T S + P+ V +P+GV +A G HT
Sbjct: 651 CWGANWSGQLGDGSYTDS-------------STPVAVSGLPSGVTAIAAGRFHTCARTGS 697
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
G + W N YGQ + T + P V V V +AAG
Sbjct: 698 GGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGVTAIAAG 738
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 22 QSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
Q GD R VA+ G+ + +A G HTCA TS G + WG +GQLG G T
Sbjct: 404 QLGDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 463
Query: 79 SFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
R+ P+ V + +GV +A G SHT M G + WG NS GQ +
Sbjct: 464 -------------RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDG 510
Query: 137 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+T P V EV +A+GG H+ LT +
Sbjct: 511 TTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSS 544
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 74/168 (44%), Gaps = 25/168 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
++ WG GQLG D R VA+ G+ + +A GG HTCA TS G +
Sbjct: 241 VWCWGDNWSGQLG-------DGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVM 293
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T R+ P+ V + +GV +A G SHT
Sbjct: 294 CWGANWSGQLGDGTTTA-------------RSTPVAVSGLASGVTAIAAGDSHTCALTSS 340
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G + WGYN +GQ + +T P V V +AAG H+ L
Sbjct: 341 GGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCAL 388
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 20 SLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQ 76
S Q GD R VA+ G+ + +A GG HTCAL S G ++ WG +GQLG G
Sbjct: 198 SGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTT 257
Query: 77 TRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
T R+ P+ V + +GV +A G HT G + WG N GQ
Sbjct: 258 TD-------------RSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLG 304
Query: 135 NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+ +T P V V +AAG H+ LT +
Sbjct: 305 DGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSS 340
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
+ WG GQLG D R VA+ G+ + +A G HTCALTS G ++
Sbjct: 292 VMCWGANWSGQLG-------DGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVW 344
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG GQLG G T R+ P+ V + +GV +A G HT M
Sbjct: 345 CWGYNFFGQLGDGTTTD-------------RSTPVAVSGLGSGVTAIAAGDFHTCALMSS 391
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG N GQ + +T P V V V +AAG H+ T +
Sbjct: 392 GGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSS 442
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ +A GG HTCALTS G + WG GQLG G T R+ P+ V
Sbjct: 69 VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTD-------------RSTPVAVSG 115
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
+ +GV +A G++HT M G + WG N GQ + +T P V V +A
Sbjct: 116 LTSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIA 175
Query: 159 AGGGHSAVLTDA 170
AG H+ T +
Sbjct: 176 AGDDHTCARTSS 187
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 70/168 (41%), Gaps = 25/168 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
+ WG GQLG D R VA+ G+ + +A G HTCAL S G +
Sbjct: 88 VMCWGRNGFGQLG-------DGTTTDRSTPVAVSGLTSGVTAIAAGYAHTCALMSSGGVM 140
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T R+ P+ V + +GV +A G HT
Sbjct: 141 CWGDNWSGQLGDGTTTD-------------RSTPVAVSGLASGVTAIAAGDDHTCARTSS 187
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G + WG N GQ + +T P V V +AAGG H+ L
Sbjct: 188 GGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCAL 235
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + +K PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 2314 VFSWGEGDDGKLGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWG 2370
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G +S T R P LV V V VACG + TL +
Sbjct: 2371 LGEYGRLGHG-----------DSTTQLR--PKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G ++ WG +G+ S P V+ G+ V ++ G S LT A
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKA 2469
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + D+ PR + +L G + D+ACGG H+ +TS G LY W
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDR---PRVIESLRGKEVIDIACGGAHSACVTSSGELYTW 3344
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTY--FRNIPILVVPNGVQLVACGH--SHTLVYMRD 119
G + G+LG G P +D +R I VACG S TL D
Sbjct: 3345 GKGRYGRLGHGDSEDQLR--PKMADALKGYRVID----------VACGSGDSQTLCISDD 3392
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG YG+ S P VD
Sbjct: 3393 DNVWSWGDGDYGKLGRGGSDGCKVPQKVD 3421
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T LT +G
Sbjct: 2365 ELYTWGLGEYGRLGH-----GDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y+WG G+LG G +E + N+ L GV + CG +L +
Sbjct: 2420 VYSWGDGDFGKLGRG---------GSEGCSVPHNVERL-NGQGVIQIECGAQFSLALTKA 2469
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG Y + + ++ P + G ++ +A G H +TD
Sbjct: 2470 GQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD 2520
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG S Q+ D +P++V L +K VA GG H ALT G +++
Sbjct: 2260 VYACGEGTNGRLGLGSSQNVD---IPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFS 2316
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG S + E + ++ +ACG SH+ G++
Sbjct: 2317 WGEGDDGKLG------HLSRMNCEKPRLLEALKT----KRIRDIACGSSHSAAVTSSGEL 2366
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ + ST P V VG+ V ++A G + LT
Sbjct: 2367 YTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLT 2413
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V AL G I +A G +H A + +G +Y WG
Sbjct: 3447 VYTWGKGDYHRLGHGS---DDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWG 3503
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + I + + VACG +HT+ + +H
Sbjct: 3504 DNDEGQLGDG----------TTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLHA 3553
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y+WG G G+LG CS+ P V L+G + + CG + ALT G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSV--------PHNVERLNGQGVIQIECGAQFSLALTKAGQ 2471
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYM 117
++ WG +LG G +D++ R + G ++ VA G H L
Sbjct: 2472 VWTWGKGDYFRLGHG------------TDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVT 2519
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G++ WG N +GQ + +T P+ V G + ++A G HS
Sbjct: 2520 DTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHS 2567
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P++V AL I + V CG + ALT G +Y W
Sbjct: 3394 NVWSWGDGDYGKLGRGG---SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTW 3450
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G SD + R + G ++ +A G H + G+
Sbjct: 3451 GKGDYHRLGHG------------SDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGE 3498
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDACSLKELCEFR 180
++ WG N GQ + + P V ++ +A G H+ + + K L R
Sbjct: 3499 VYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTS---KPLHAGR 3555
Query: 181 LAESVTL 187
L ++V +
Sbjct: 3556 LPQTVPM 3562
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG + D P + ++ + IK VA GG H AL+ +G +Y+
Sbjct: 3235 LYATGYGASGRLG---IGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYS 3291
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G +T+ ES R ++ +ACG +H+ G++
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIES---LRGKEVID-------IACGGAHSACVTSSGEL 3341
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ WG YG+ + S P D G V +A G G S L
Sbjct: 3342 YTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTL 3387
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P + +L + + G A+T+ G LYA G
Sbjct: 3183 IYGWGHNHRGQLGGIE---GAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATG 3239
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LG+G T S S + T +I + + V G H L +G+++
Sbjct: 3240 YGASGRLGIG-GTDSVS-----TPTLLESIQHVHIKKVA--VNSGGKHALALSVEGEVYS 3291
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + T P ++ G EV +A GG HSA +T + L
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGEL 3341
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 12/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K P L + + A G +T++G +
Sbjct: 2204 IQTKVFVWGLNDKDQLGG---PRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKV 2260
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + IP + + + + V V G H + DG
Sbjct: 2261 YACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVA------VHSGGRHAMALTVDG 2312
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 2313 KVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGEL 2366
>gi|340370446|ref|XP_003383757.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Amphimedon queenslandica]
Length = 529
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYAW 63
IY WG GQLG S LP+ V AL G+ + VACGG H+ AL++KG +Y+W
Sbjct: 96 IYAWGANGYGQLGRGSTSVHSN--LPKPVNHALGGVIVSKVACGGFHSLALSNKGDVYSW 153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T ++ PN + L+ V C H+ + +G+I
Sbjct: 154 GFNNCGQLGCGDTTSRYN--PNR-------VTGLLDGKTCIHVTCNHTSSFALTGEGEIL 204
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
WG N GQ + P V + ++ G H+ L++ S+ +
Sbjct: 205 SWGQNGSGQLGIGSTLQQLQPVNVQINDAFIDQIVTGYSHALALSECGSIYAWGANTHGQ 264
Query: 184 SVTLSNASEIEDVASRTGSEALARLCERLREHLLH 218
L NAS+ + V+S T + R E HL H
Sbjct: 265 ---LGNASK-QCVSSPTIINNIGRASEVAAIHLSH 295
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGAL 60
D+Y+WG + GQLG GD P RV LDG V C + ALT +G +
Sbjct: 149 DVYSWGFNNCGQLG-----CGDTTSRYNPNRVTGLLDGKTCIHVTCNHTSSFALTGEGEI 203
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+WG +GQLG+G + + + + F + + G+SH L G
Sbjct: 204 LSWGQNGSGQLGIGSTLQQLQPVNVQINDAF-----------IDQIVTGYSHALALSECG 252
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
I+ WG N++GQ N P+ ++ +G ++AA
Sbjct: 253 SIYAWGANTHGQLGNASKQCVSSPTIIN-NIGRASEVAA 290
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 10 LGSVGQLGHCSLQSGDKE---LLPRRVVALDGIFIKDVACGG-VHTCALTSKGALYAWGG 65
L ++G G+C L G P+R+ +L G+ I +A G H ALT G +YAWG
Sbjct: 42 LYAIGTNGNCCLGLGTPITPGFTPKRIESLKGLNISSIAYGSDPHVLALTEDGTIYAWGA 101
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G T S +P + + V VACG H+L G ++ W
Sbjct: 102 NGYGQLGRG-STSVHSNLPKPVNHALGGVI-------VSKVACGGFHSLALSNKGDVYSW 153
Query: 126 GYNSYGQAANEKSTYAWYPSPV 147
G+N+ GQ +T + P+ V
Sbjct: 154 GFNNCGQLGCGDTTSRYNPNRV 175
>gi|321468288|gb|EFX79274.1| hypothetical protein DAPPUDRAFT_104548 [Daphnia pulex]
Length = 202
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS GQLGH S++S + P+ + L GI I +A GG H+CAL+ G +Y WG
Sbjct: 84 VYSWGSGSRGQLGHGSIESNE---YPQEIEVLGGIKIVQIAAGGWHSCALSESGDVYVWG 140
Query: 65 GCQAGQLGL------GPQTRSFSF-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
++GQLGL G ++S I +E +P + V ++CG HT V +
Sbjct: 141 WNESGQLGLPCRNLSGSASKSEHVSIQSEPRLLDHAMPFSLDEANVTSISCGSRHTAVTL 200
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 24 GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI 83
G+ L P R+ + +F+ +A G H AL S+G +Y+WG GQLG G
Sbjct: 49 GNIHLPPSRMENMQSVFVA-IASGKEHFIALNSEGKVYSWGSGSRGQLGHGSI------- 100
Query: 84 PNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
ES+ Y + I +L G+++V A G H+ G ++ WG+N GQ
Sbjct: 101 --ESNEYPQEIEVL---GGIKIVQIAAGGWHSCALSESGDVYVWGWNESGQ 146
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+A G H + +GK++ WG S GQ + YP ++ G ++ ++AAGG HS
Sbjct: 68 IASGKEHFIALNSEGKVYSWGSGSRGQLGHGSIESNEYPQEIEVLGGIKIVQIAAGGWHS 127
Query: 165 AVLTDA 170
L+++
Sbjct: 128 CALSES 133
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+ GQLGH +++ + +PR + L I+ ++CG H AL G L+ W
Sbjct: 104 NLYSWGAGNDGQLGHATVEHYSR--IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTW 161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLGLG FI S +++ G+ L V G SH+ G
Sbjct: 162 GQNTHGQLGLGN-----GFISQSSPQKVKSL------EGIPLAQVTAGGSHSFALSLSGA 210
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
+ GWG NS GQ P V +V ++ G H+A+LT A
Sbjct: 211 VFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKA 260
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG + GQLG L +G + P++V +L+GI + V GG H+ AL+ GA++
Sbjct: 157 QLFTWGQNTHGQLG---LGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFG 213
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD 119
WG AGQLGL +D + P V P + V ++CG HT + +
Sbjct: 214 WGKNSAGQLGL-------------NDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKA 260
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G + +G GQ ++ P V +G EV ++A G H+
Sbjct: 261 GGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHT 306
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+ G GQLGH G P V L IK +ACG H+ AL+ +G LY+W
Sbjct: 54 QVYSCGWNGEGQLGHS--HEGTH---PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG +S IP I + +Q ++CG H L DG++
Sbjct: 109 GAGNDGQLG-HATVEHYSRIP--------RIIKKLSQQKIQQMSCGDDHCLALGDDGQLF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N++GQ + P V G + ++ AGG HS L+
Sbjct: 160 TWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALS 206
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH SL + E+ PRRV+ L G + +ACG HT A S G LYA+
Sbjct: 263 LFTFGAGGSGQLGHDSLHN---EINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGDLGQLGTG 330
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 8 WGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG + GQLG+ SL++ E P +K+VACGG HT L G +Y+ G
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + + + ++ + ++I ACG SH+L G ++ WG
Sbjct: 62 GEGQLGHSHEGTHPAPVATLAEEHIKHI------------ACGQSHSLALSLQGNLYSWG 109
Query: 127 YNSYGQAANEK-STYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTD 169
+ GQ + Y+ P + ++++++ G H L D
Sbjct: 110 AGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG L + P V L + ++CG HT LT G L+ +G
Sbjct: 211 VFGWGKNSAGQLG---LNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
+GQLG + NE + R + + ++ + V +ACG HTL ++ G ++
Sbjct: 268 AGGSGQLG-------HDSLHNEINP--RRV-LELMGSEVSQIACGRKHTLAFVPSSGTLY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV--DW--CVGE------------VRKLAAGGGHSAVL 167
+G GQ P+ V W C G+ V+++ +GG + VL
Sbjct: 318 AFGCGDLGQLGTGHENNVKCPTVVKGKWASCSGQIPMHADCAAYNIVKQIFSGGNKAFVL 377
Query: 168 -TDACSLKELCEFRL 181
T S + +FRL
Sbjct: 378 CTKWESSERADDFRL 392
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P VVALD I V+CG HT AL KG +++WG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGL +F E RNI L + VQ+ VACG+ H+ + G++
Sbjct: 110 LGSNGQLGLN----NFE----ECVRVPRNIKCL---SDVQIAQVACGYWHSHALSKGGQV 158
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ + P + G +L+AGG HS +T
Sbjct: 159 FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT 206
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GQLG G P+ + +L GI ++ GG H+ A+T GA++ W
Sbjct: 157 QVFSWGQNQFGQLGLG--MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL + D +F + + V V+CG HT + +
Sbjct: 215 GKNKFGQLGLN----------DTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
+G YGQ + + + P V +G V
Sbjct: 265 TFGAGGYGQLGHNCTNHEINPRKVFELMGNV 295
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ G + DV CG HT L G +Y G
Sbjct: 4 WGNASYGQLG---LGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGKI 122
GQLG +S R P VV Q+ V+CG SHTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLT 168
WG S GQ N P + C+ +V+ ++A G HS L+
Sbjct: 106 FSWGLGSNGQLGLNNFEECVRVPRNIK-CLSDVQIAQVACGYWHSHALS 153
>gi|307109803|gb|EFN58040.1| hypothetical protein CHLNCDRAFT_20586, partial [Chlorella
variabilis]
Length = 274
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWGL GQLG + G+ + P+R+ L G +K ++CG HT A+T + + W
Sbjct: 101 EVYTWGLNDKGQLGSAT-GPGENKDAPKRMELLVGWNVKAISCGAEHTIAITPEDVI-TW 158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ G G + + P R+I +L Q++ CG HTL +++
Sbjct: 159 GSNEYGQCGHGDKAETDWVKP-------RSIKMLHEQMVTQVI-CGRYHTLCVTATSQVY 210
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLTD 169
WG NS GQ + P+ V+ W + V++LAAG HS LT
Sbjct: 211 AWGRNSSGQLGLGDTADRRGPTLVEGLWAL-PVQQLAAGEAHSVALTS 257
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE----LLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
D+ TWG GQ GH GDK + PR + L + V CG HT +T+
Sbjct: 154 DVITWGSNEYGQCGH-----GDKAETDWVKPRSIKMLHEQMVTQVICGRYHTLCVTATSQ 208
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTL 114
+YAWG +GQLGLG DT R P LV +P VQ +A G +H++
Sbjct: 209 VYAWGRNSSGQLGLG-------------DTADRRGPTLVEGLWALP--VQQLAAGEAHSV 253
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G + WG N +GQ
Sbjct: 254 ALTSNGFLFTWGGNEHGQ 271
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG S GQLG L P V L + ++ +A G H+ ALTS G L+ W
Sbjct: 208 QVYAWGRNSSGQLG---LGDTADRRGPTLVEGLWALPVQQLAAGEAHSVALTSNGFLFTW 264
Query: 64 GGCQAGQLGL 73
GG + GQLGL
Sbjct: 265 GGNEHGQLGL 274
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G H +T +G +Y WG GQLG + P E+ + + +LV N V
Sbjct: 86 LSMGSSHAAGVTGQGEVYTWGLNDKGQLG-------SATGPGENKDAPKRMELLVGWN-V 137
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ ++CG HT+ + I WG N YGQ
Sbjct: 138 KAISCGAEHTIAITPEDVIT-WGSNEYGQ 165
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G GQLG L S + V L G + DV C HT + G LYA
Sbjct: 141 NLYTVGFNMRGQLG---LGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYAC 197
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG R+ +P + +FR P+L VACG +T+ +RDG +
Sbjct: 198 GCNDYGQLGLGDH-RNGELVPRPVEYFFRR-PVLA-------VACGQHYTIASLRDGGVV 248
Query: 124 GWGYNSYGQ-----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+G N +GQ + S +P+D V V +L+ G H+AV+T+
Sbjct: 249 AFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLV--VPQLSCGYHHTAVVTE 297
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +G GQLG S + P R+ A LD + + ++CG HT +T GA+Y +
Sbjct: 247 VVAFGKNDHGQLGLDSTSEPVSQ--PTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTF 304
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG + ES R + VACG HTLV DGK+
Sbjct: 305 GRNDYGQLGLGHKMHMARPARVESLARMR----------ITQVACGCYHTLVLSDDGKVF 354
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G N++GQ E S P + + V K+AAG HS L
Sbjct: 355 PFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGALY 61
+Y++G + G+L +L P RV + G + DVACG T L G +Y
Sbjct: 33 VYSFGQNTYGEL---ALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVY 89
Query: 62 AWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G +GQ +G R + F P S R + I NG + +A H+ +
Sbjct: 90 TCGYNDSGQCAIGTTERVPTLRFSPGLSSN--RTVRIF-SGNGSEHLAALHA-------N 139
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G+N GQ ST + V+ G+ V + H+A++ D
Sbjct: 140 GNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMD 190
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 4193 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4249
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTLV DG
Sbjct: 4250 GNGDYGRLGLG-------------NTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDG 4296
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 4346
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 480 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 536
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 537 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 583
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 584 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 632
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4299 VWAFGDGDYGKLG---LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4355
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P L +GV + +A G HTL G +
Sbjct: 4356 --QDRLIGL-PEGRA------RNHNRPQQVPAL---SGVFVEDIAVGAEHTLALSASGDV 4403
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 165
+ WG NS GQ + + P+ V G+ VR+++AG HSA
Sbjct: 4404 YAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSA 4447
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 585 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 639
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 640 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 682
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 683 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 736
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4143 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4200 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 4249
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G YG+ ++ P V G ++ ++A G H+ V++ S+
Sbjct: 4250 GNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSM 4298
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQL + P A + V CG T + + G + A
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAVSPPPSPSFCQA------QQVICGQNCTFVIQANGTVLAC 4142
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4143 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4187
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4188 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4241
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 375 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 429
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 430 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 477
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 478 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 611 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 668
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G AGQLGL SD R P L+ V ++CG HT V + G
Sbjct: 669 GMNNAGQLGL-------------SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 715
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 716 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 769
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 508 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 562
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G GQLGL S + +P L+ Q V+CG+ H L DG
Sbjct: 563 GAGSDGQLGLMTTEDSVA------------VPRLIQKLNQQTILQVSCGNWHCLALAADG 610
Query: 121 KIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 611 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 660
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 717 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 773
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 774 GCGARGQLGTG 784
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 665 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 721
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +D + ++ + V +ACG HTL ++ G I+
Sbjct: 722 AGSCGQLGHD----------SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 771
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G + GQ + PSPV
Sbjct: 772 AFGCGARGQLGTGHTCNVKCPSPVK 796
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G S LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 458 WGYWSLGQPGISSNLQGIVAE--PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLN 515
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 516 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 563
Query: 127 YNSYGQ 132
S GQ
Sbjct: 564 AGSDGQ 569
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--------AAGGGHSAVLT 168
WG NS+GQ K YPS VR L AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKE----YPSQAS--PQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGAKGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|147844431|emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]
Length = 363
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G G LGH +ELLPR V I+ +A G HT A+T G LY W
Sbjct: 143 QVFTWGYGGFGALGHSVYH---RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTW 199
Query: 64 GGCQA-GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G Q G+LGLGP PNE + +P V V+CG T+V ++G++
Sbjct: 200 GRDQGDGRLGLGPNCG-----PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 254
Query: 123 HGWG 126
WG
Sbjct: 255 WNWG 258
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 4 DIYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG G +G +C G +P +V AL + + V+CGG T LT +G
Sbjct: 195 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTQEGQ 253
Query: 60 LYAWGGCQA 68
L+ WG C A
Sbjct: 254 LWNWGACGA 262
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG G G+LG LP LD I + A GGVH+ AL+S G ++ W
Sbjct: 93 ELWIWGKGDGGRLG---FGHEYPAFLPTLNPNLDSI--RSTALGGVHSVALSSLGQVFTW 147
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG----VQLVACGHSHTLVYMRD 119
G G LG Y R + +V ++ +A +HT
Sbjct: 148 GYGGFGALG--------------HSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITES 193
Query: 120 GKIHGWGYN 128
G+++ WG +
Sbjct: 194 GELYTWGRD 202
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G LGH + + + P+ + + ++ + CGG+H+ ALT KG +Y+WG
Sbjct: 247 VYSWGNGEGGLLGHSN---EEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWG 303
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDG 120
+ GQLGL + + YF +P + V+ +A G +H+L ++G
Sbjct: 304 RNEGGQLGLNQDVL-------KDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNG 356
Query: 121 KIHGWGYNSYGQ 132
++ GWGYN GQ
Sbjct: 357 QVFGWGYNINGQ 368
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 22/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD-------KELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+Y+WG + GQ+G+ + K P+ V L I V+CG H+ A+T
Sbjct: 133 LYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAITFN 192
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLV 115
G + WG + QLGLG + + + P + +PN + V+CG HTL
Sbjct: 193 GNVLVWGDNSSSQLGLGINSPNSIYYP------------VQIPNIQNIINVSCGSEHTLA 240
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+++ WG G + P +D +V + GG HS LT
Sbjct: 241 LDNRNQVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALT 294
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL---LPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+Y+WG GQLG D LP ++ L+G+F+K +A G H+ AL G +
Sbjct: 299 VYSWGRNEGGQLGLNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQV 358
Query: 61 YAWGGCQAGQLGLGPQ 76
+ WG GQLGLG Q
Sbjct: 359 FGWGYNINGQLGLGQQ 374
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 58 GALYAWGGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSH 112
G LY+WG GQ+G P+T + P N P LV P + + V+CG+ H
Sbjct: 131 GVLYSWGQNTEGQMGNVYDPKTNN----PKHRKIKI-NFPKLVYPLKDSIIIQVSCGYQH 185
Query: 113 TLVYMRDGKIHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ +G + WG NS Q N ++ +YP + + + ++ G H+ L +
Sbjct: 186 SVAITFNGNVLVWGDNSSSQLGLGINSPNS-IYYPVQIP-NIQNIINVSCGSEHTLALDN 243
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + PRRV + L + ++ACG + + A+ G +Y
Sbjct: 157 EVYAWGYNNSGQVGSGSTAN---QPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYG 213
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG N + I L N VQ VACG++HTL +G +
Sbjct: 214 WGYNCNGQLGLGN---------NGNQQTPCRIAALQGVNIVQ-VACGYAHTLALTDEGFV 263
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + P+P++ + ++AA
Sbjct: 264 YAWGANSYGQLGTGNKSNQALPTPINTDKERIVEVAA 300
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSG------DKELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
++Y WG QLG+ + G LL +RV +VACG HT ALT+
Sbjct: 104 EVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVT--------EVACGSHHTIALTTD 155
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G +YAWG +GQ+G G + P + +N VV N +ACG ++ +
Sbjct: 156 GEVYAWGYNNSGQVGSGSTANQPT--PRRVSSCLQN---KVVVN----IACGQLCSMAVL 206
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+G+I+GWGYN GQ + P + G + ++A G H+ LTD
Sbjct: 207 DNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTD 259
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG GQLG L + + P R+ AL G+ I VACG HT ALT +G +YAW
Sbjct: 210 EIYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAW 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G +S +P +T I V++ AC SHT + G++
Sbjct: 267 GANSYGQLGTG--NKSNQALPTPINTDKERI--------VEVAACHTSHTSAAKTQSGQV 316
Query: 123 HGWG 126
WG
Sbjct: 317 LMWG 320
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 21/153 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG LQS + PRR+ L G I ++ G G H T+ G +YA
Sbjct: 51 EVFALGTNCSGCLGLGDLQS---TIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + P LV N V VACG HT+
Sbjct: 108 WGHNGYSQLGNGTTNHGLT-------------PALVSTNLLSKRVTEVACGSHHTIALTT 154
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
DG+++ WGYN+ GQ + + P V C+
Sbjct: 155 DGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCL 187
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+T ++A G +G LGLG +S R I +L V L H
Sbjct: 46 VTVNDEVFALGTNCSGCLGLGDL---------QSTIEPRRIDVLCGKKIVSLSYGTGPHV 96
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLT 168
++ DG+++ WG+N Y Q N + + P+ V + V ++A G H+ LT
Sbjct: 97 VIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALT 153
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++T GLG G+LGH GD+E LP V AL+ + I +ACG HT +TS G LY
Sbjct: 268 SLFTCGLGLNGRLGH-----GDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLY 322
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WGG G+LGLG TR +P RN ++ VA G H+ DG+
Sbjct: 323 MWGGAAFGKLGLG-STRGSQLLPKHVGGPLRNKTVVS-------VALGSQHSACVTTDGE 374
Query: 122 IHGWG 126
++ WG
Sbjct: 375 LYTWG 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G +LGH +Q E LPRRV AL G+F+ V CG HT + G ++AW
Sbjct: 374 ELYTWGQGR--RLGH-EVQGESDEFLPRRVEALVGLFVIHVVCGDAHTACIVENGNVWAW 430
Query: 64 G 64
G
Sbjct: 431 G 431
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR V AL GI VA GG+ ++ G LY WG GQLG G R + +P
Sbjct: 102 PRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTG--DRRDASVPRVVKA 159
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
I V++VAC HT+ + DG + WG
Sbjct: 160 LQGKI--------VKVVACAQEHTVCCLDDGSAYAWG 188
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG S GQLG +GD+ +PR V AL G +K VAC HT G+ Y
Sbjct: 131 ELYMWGCNSEGQLG-----TGDRRDASVPRVVKALQGKIVKVVACAQEHTVCCLDDGSAY 185
Query: 62 AWGGCQAGQLGL 73
AWG G+LGL
Sbjct: 186 AWGCALNGRLGL 197
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG G G+LGH + +PR + G + VACG HT + +G L+ +
Sbjct: 86 QVYSWGWGDFGRLGHGDC---NDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTF 142
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG + +D + + + V+ VACG H+L G +
Sbjct: 143 GRNQNGQLGLG----------HTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVF 192
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA--GGGHSAVLTD 169
WG+ YG + +S + P+ V G +R ++A G HSAV+++
Sbjct: 193 SWGWGRYGNLGDGESQDRYLPTRVVGLEG-IRMVSAECGWRHSAVVSE 239
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
+ +WG G GQLGH D+ L P+ + L I+ V CG +T A+ S+G +Y+W
Sbjct: 34 VTSWGRGEDGQLGH---GQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSW 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G F P E +F P V VACG +HTLV +G++
Sbjct: 91 GWGDFGRLGHGDCNDVFVPRPIE---FFSGRP-------VHRVACGDTHTLVVAGEGELF 140
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+G N GQ + P V GE VR +A G HS T++ ++
Sbjct: 141 TFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTV 191
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++T+G GQLGH GD +P +V AL I VA G HT A S G LY
Sbjct: 243 VFTFGWSKYGQLGH-----GDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYG 297
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMR 118
WG + GQLGLG D+ R P+LV V LV CG HT+
Sbjct: 298 WGWNKFGQLGLG-------------DSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTE 344
Query: 119 DGKIHGWGYNSYGQ 132
G+++ WG GQ
Sbjct: 345 GGRVYSWGRGVNGQ 358
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T+G GQLG L + L P+ VVAL G ++ VACG H+ A T G +++W
Sbjct: 138 ELFTFGRNQNGQLG---LGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSW 194
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVA--CGHSHTLVYMRDG 120
G + G LG G ++ R +P VV G+++V+ CG H+ V DG
Sbjct: 195 GWGRYGNLGDG-------------ESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDG 241
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ +G++ YGQ + T P V
Sbjct: 242 RVFTFGWSKYGQLGHGDHTDRTVPCQV 268
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ V+CG H+ A+ S G + +WG + GQLG G + P T +
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLA--PKAIST--------LTD 64
Query: 101 NGVQLVACGHSHTL-VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 158
G++ V CG +T+ V G+++ WG+ +G+ + + P P+++ G V ++A
Sbjct: 65 AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVA 124
Query: 159 AGGGHSAVL 167
G H+ V+
Sbjct: 125 CGDTHTLVV 133
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHTCALTSKGAL 60
++Y WG GQLG GD P V+ AL G + V CG HT A+T G +
Sbjct: 294 NLYGWGWNKFGQLG-----LGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRV 348
Query: 61 YAWGGCQAGQLGLGPQ 76
Y+WG GQLG G +
Sbjct: 349 YSWGRGVNGQLGHGAE 364
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG GQLG L++ D + I +D+ CGG HT L+ G +Y +
Sbjct: 582 DVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEI--QDIKCGGSHTVVLSCTGVVYVF 639
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G Q+GQLG+ N++ Y N IL +PN ++ V CG HT G
Sbjct: 640 GNGQSGQLGVA---------VNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGC 690
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTDACSLK 174
++ WG S G+ + + P+ V+ +V+ +A G H+A AC ++
Sbjct: 691 LYTWGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTA----ACVIR 740
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G S LG+ + K+ +PR+V IK V+CG T AL S+G LY++
Sbjct: 478 ELYTFG-RSGPHLGYTT--EDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSF 534
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNI--PILVVP-NGVQL--VACGHSHTLVYMR 118
G GQLG G +F +I P L+ NGV++ V+CG H
Sbjct: 535 GKNDCGQLGAG---------------HFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTV 579
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYP--SPVDWCVGEVRKLAAGGGHSAVLT 168
+G + WG N +GQ +K P +P + E++ + GG H+ VL+
Sbjct: 580 NGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLS 631
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIYTWG G LGH +EL PR V AL G I+ VACG HT A++ G +++W
Sbjct: 374 DIYTWGASPKGVLGH---GEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSW 430
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G + G+LGL N D Y + I N + V+C H+ G++
Sbjct: 431 GCGRGGKLGL----------KNILDRYMP-LKIGAFENVNITFVSCNELHSASVTESGEL 479
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+ +G + + P VD+ K + G
Sbjct: 480 YTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCG 518
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG + + P V+ L G+ +A G H+ A+ + G + AWG
Sbjct: 166 VRAWGYNAYGQLGDGTTT---QRRTPVAVLGLTGVVA--IAAGENHSLAVLADGTVRAWG 220
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
G+LG G T+ R P+LV GV +A G +H+L + DG +
Sbjct: 221 NNTYGRLGDGTTTQ-------------RTSPVLVSSLTGVTAIAAGANHSLAVLADGTVR 267
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD--ACSLKELCEFR 180
WGYN+ G+ + +T P V G V +++AGGGHS A+L D A + +
Sbjct: 268 AWGYNASGRLGDGTTTQRATPVAVPGLTG-VTEISAGGGHSLALLADGTARAWGSNVSGQ 326
Query: 181 LAESVTLSNASEIEDVASRTGSEALA 206
L + T+SN + V+S TG AL+
Sbjct: 327 LGDG-TVSNRTSPVLVSSLTGVTALS 351
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG + + P V L G V+ GG ++ AL G + AWG
Sbjct: 66 VRAWGDNASGQLGDGTTT---QRSSPTAVPGLAGAVA--VSAGGEYSLALLGDGTVRAWG 120
Query: 65 GCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G P S +P S GV +A G++H L + DG +
Sbjct: 121 NNTYGQLGDGTTPHRASPGAVPGLS--------------GVVAIAAGNNHALALLSDGTV 166
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC--SLKELCEF 179
WGYN+YGQ + +T P V G V +AAG HS AVL D +
Sbjct: 167 RAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVV-AIAAGENHSLAVLADGTVRAWGNNTYG 225
Query: 180 RLAESVTLSNASEIEDVASRTGSEALA 206
RL + T S + V+S TG A+A
Sbjct: 226 RLGDGTTTQRTSPVL-VSSLTGVTAIA 251
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG S + P V AL G+ + G H+ AL S G + AWG
Sbjct: 416 VRAWGHNTYGQLGDGSTA---QRTAPVVVPALTGVV--SLTAGYDHSLALLSDGTVRAWG 470
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
+GQLG + T R P+ V + N V L H L + DG +
Sbjct: 471 NNASGQLG-------------DGTTNQRGTPVQVSGLTNVVALSGGKLYHALALLSDGTV 517
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKE 175
WGYN GQ + ++ W P V V +AAGG +S L +++
Sbjct: 518 RAWGYNMNGQLGDGSTSNRWTPVAVSGLT-NVVAIAAGGDYSLALQSNGTVQS 569
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG ++ + +L V +L G+ ++ GG H+ AL + G AWG
Sbjct: 319 WGSNVSGQLGDGTVSNRTSPVL---VSSLTGV--TALSAGGNHSLALLADGTARAWGANV 373
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
+GQLG G T+ R +P+ L GV +A G H+L + +G + WG
Sbjct: 374 SGQLGDGTTTQ-------------RTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWG 420
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
+N+YGQ + + P V G V L AG HS A+L+D
Sbjct: 421 HNTYGQLGDGSTAQRTAPVVVPALTGVV-SLTAGYDHSLALLSDGT 465
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + G+LG + + P V +L G+ +A G H+ A+ + G + AWG
Sbjct: 216 VRAWGNNTYGRLGDGTTT---QRTSPVLVSSLTGV--TAIAAGANHSLAVLADGTVRAWG 270
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
+G+LG G T+ R P+ VP GV ++ G H+L + DG
Sbjct: 271 YNASGRLGDGTTTQ-------------RATPV-AVPGLTGVTEISAGGGHSLALLADGTA 316
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACS 172
WG N GQ + + P V G V L+AGG HS A+L D +
Sbjct: 317 RAWGSNVSGQLGDGTVSNRTSPVLVSSLTG-VTALSAGGNHSLALLADGTA 366
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQLG + + P +V L + +A G H+ AL + G +YAWG
Sbjct: 617 VYAWGRNDFGQLGDGTTV---QRNTPVQVPGLTNVVA--IATGWDHSLALRADGTVYAWG 671
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGKI 122
A QLG G S +R P VP +VA G + +L + G +
Sbjct: 672 YNYARQLGDG------------STANYRQTPA-PVPGLTNVVAVTAGGNQSLALLSSGAV 718
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
H WG NS+G+ N + P+PV
Sbjct: 719 HAWGDNSHGELGNGSTLTP--PAPV 741
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG---VHTCALTSKGALY 61
+ WG + GQLG + ++ P +V L + VA G H AL S G +
Sbjct: 466 VRAWGNNASGQLGDGTT---NQRGTPVQVSGLTNV----VALSGGKLYHALALLSDGTVR 518
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDG 120
AWG GQLG + T R P+ V V +A G ++L +G
Sbjct: 519 AWGYNMNGQLG-------------DGSTSNRWTPVAVSGLTNVVAIAAGGDYSLALQSNG 565
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
+ WGY YG + TY+ P V V V +AAG H
Sbjct: 566 TVQSWGYGVYGPLGRDYDTYSPTPKAVP-GVTNVVAIAAGANH 607
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG S P V L + +A GG ++ AL S G + +WG
Sbjct: 517 VRAWGYNMNGQLGDGSTS---NRWTPVAVSGLTNVVA--IAAGGDYSLALQSNGTVQSWG 571
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG + DTY + V +A G +H L DG ++
Sbjct: 572 YGVYGPLG------------RDYDTYSPTPKAVPGVTNVVAIAAGANHVLALRADGTVYA 619
Query: 125 WGYNSYGQ 132
WG N +GQ
Sbjct: 620 WGRNDFGQ 627
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
P V+L A G +H+L+ DG + WG N+ GQ + +T P+ V G V ++A
Sbjct: 45 PRAVRL-ASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGAV-AVSA 102
Query: 160 GGGHSAVL 167
GG +S L
Sbjct: 103 GGEYSLAL 110
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+ WG GQLG + S P V G + VA GG H+ A+TS G + AW
Sbjct: 270 DVLAWGANGSGQLGDGTTTSSST---PVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAW 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDG 120
G AGQLG G T S + P+ V VP G + VA G H+L
Sbjct: 327 GDNTAGQLGDGSTTHS-------------STPVAVNVPAGTTITAVATGSGHSLAVTSTD 373
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKEL 176
WG N++GQ + +T + P VD G V +A G HS + + S L
Sbjct: 374 TALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAIVPSTSTTTL 430
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG + +P G I VA GG+H+ ALTS G + AWG
Sbjct: 222 WGDNSSGQLGDGTAT---DSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANG 278
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T S + P+ V VP G V VA G H+L G +
Sbjct: 279 SGQLGDGTTTSS-------------STPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLA 325
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N+ GQ + +T++ P V+ G + +A G GHS +T
Sbjct: 326 WGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVT 370
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRR--VVALD---GIFIKDVACGGVHTCALTSKGALYA 62
WG + GQLG D +P VA+D G + ++ GGVH A+TS G A
Sbjct: 117 WGDNAFGQLG-------DGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALA 169
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRD 119
WG GQLG G TRS + P+ V VP G + VA G H+L
Sbjct: 170 WGDNFWGQLGDGSTTRSRT-------------PVAVNVPAGTTITAVAAGQGHSLAVTSA 216
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT---DACSLKE 175
G WG NS GQ + +T + P D G + +AAGG HS LT D +
Sbjct: 217 GTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGA 276
Query: 176 LCEFRLAESVTLSNASEIE-DVASRTGSEALARLCERLREHLLHGDEFDCDDDT 228
+L + T S+++ + DV + T A+A GD D+T
Sbjct: 277 NGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNT 330
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S G+LG + P V G I VA G H+ A+TS G AWG
Sbjct: 65 WGTNSAGRLGDGTTTDSSS---PVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNA 121
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLVYMRDGKIHG 124
GQLG G + IP+ S P+ V VP G + A G H L G
Sbjct: 122 FGQLGDG------TTIPSSS------TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALA 169
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG N +GQ + +T + P V+ G + +AAG GHS +T A
Sbjct: 170 WGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSA 216
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 27 ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
LL V+ + + V GV + A G AWG AG+LG G T S S
Sbjct: 29 PLLVAIVLGVTSVGAARVLAQGVPSAAAGPPGTGLAWGTNSAGRLGDGTTTDSSS----- 83
Query: 87 SDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS-TYAW 142
P+ V VP G + VA G H+L G WG N++GQ + + +
Sbjct: 84 --------PVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSS 135
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
P VD G V L+ GG H+ +T A
Sbjct: 136 TPVAVDVPAGTTVTALSGGGVHNLAVTSA 164
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG +++ + P + AL+ + V+CG H+ A+ G +Y+WG
Sbjct: 58 VWSCGNNSYGQLGRKNIKKSKR---PAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+ + + IP +NI L +Q V+CGH H++ +DGK+
Sbjct: 115 SGSRGQLGIK-EVKDQCSIP-------KNIAALSRDKIIQ-VSCGHYHSIALTQDGKVFS 165
Query: 125 WGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ N S + P V+ G + ++AAGG HS L+
Sbjct: 166 WGDNDHGQLGLGTNFPSQAS--PQRVNSLDGIPLAQVAAGGSHSFALS 211
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+WG GS GQLG ++ D+ +P+ + AL I V+CG H+ ALT G +++WG
Sbjct: 110 IYSWGSGSRGQLGIKEVK--DQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG P+++ N +G+ L VA G SH+ G
Sbjct: 168 DNDHGQLGLGTN------FPSQASPQRVN-----SLDGIPLAQVAAGGSHSFALSLSGTS 216
Query: 123 HGWGYNSYGQAA 134
+GWG N GQ A
Sbjct: 217 YGWGRNKEGQLA 228
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + + + P+RV +LDGI + VA GG H+ AL+ G Y WG
Sbjct: 163 VFSWGDNDHGQLGLGT--NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG 220
Query: 65 GCQAGQLGLGPQTRS 79
+ GQL L + S
Sbjct: 221 RNKEGQLALSGKNAS 235
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 6 YTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
Y WG S QLG + ++ + + R +L G I ACG H+ L + G +++ G
Sbjct: 3 YCWGDNSFRQLGINAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCG 62
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
GQLG +S R PI + V + V+CG H+L + G+I+
Sbjct: 63 NNSYGQLGRKNIKKS-----------KRPAPIQALETQVVVSVSCGKEHSLAICKTGRIY 111
Query: 124 GWGYNSYGQ 132
WG S GQ
Sbjct: 112 SWGSGSRGQ 120
Score = 36.2 bits (82), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 GVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 158
G Q+V ACG H+L+ + DG + G NSYGQ + + P+P+ + V ++
Sbjct: 36 GQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVS 95
Query: 159 AGGGHSAVL 167
G HS +
Sbjct: 96 CGKEHSLAI 104
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 2727 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2783
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK-I 122
G G+LGLG S +P E T I N VACG +HTL DG +
Sbjct: 2784 GNGDYGRLGLG--NTSNKKLP-ERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMV 2840
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G YG+ ST P VD G ++K+A G S LT
Sbjct: 2841 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 2887
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 2840 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2896
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL G +
Sbjct: 2897 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLALASTGDV 2944
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 2945 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 2991
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 2623 DVFLWGAGRHGQLA----EAGRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLAC 2676
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 2677 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 2721
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 2722 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2775
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 2677 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2733
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 2734 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 2783
Query: 126 GYNSYGQ 132
G YG+
Sbjct: 2784 GNGDYGR 2790
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG D R VA+ G+ + +A GG HTCA TS G +
Sbjct: 124 EVWCWGSNFYGQLG-------DGSYTTRSTPVAVSGLPSGVTAIAAGGWHTCARTSSGGV 176
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
+ WGG GQLG G T R+ P+ V +P+ V +A G +HT M
Sbjct: 177 WCWGGNYRGQLGDGTTTD-------------RSTPVAVSGLPSEVTAIAAGDAHTCARMS 223
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
G++ WG N+YGQ + T + P V V +AAGG H+ LT + ++
Sbjct: 224 SGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVR 279
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG S + P V L + +A GGVHTCALT G ++ WG
Sbjct: 482 VWCWGRNNSGQLGDGSTI---YHITPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVWCWG 537
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
G AGQLG G T R+ P+ V +P+GV +A G HT G +
Sbjct: 538 GNFAGQLGDGTTTD-------------RSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGV 584
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG N +GQ + +T P V V +AAG
Sbjct: 585 WCWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAAG 622
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG+ L G P V L + +A G HTCALT G ++ WGG
Sbjct: 281 WGANYSGQLGN-GLTFGRST--PGAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGGNY 336
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGW 125
+GQLG + T R+ P+ V +P+GV+ +A G HT M G + W
Sbjct: 337 SGQLG-------------DGTTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCW 383
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
G+N GQ + +T P V V +AAG
Sbjct: 384 GHNDRGQLGDGTTTARSTPVAVSGLPSGVTAIAAG 418
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ +A GG HTCA TS G ++ WGG G+LG G T S + P+ V
Sbjct: 55 VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDS-------------STPVAVSG 101
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
+P+GV +A G +HT G++ WG N YGQ + T P V V +A
Sbjct: 102 LPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGVTAIA 161
Query: 159 AGGGHSAVLTDA 170
AGG H+ T +
Sbjct: 162 AGGWHTCARTSS 173
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG G+ S Q GD R VA+ G+ ++ +A G HTCAL S G +
Sbjct: 329 VWCWG-------GNYSGQLGDGTTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVR 381
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG GQLG + T R+ P+ V +P+GV +A G HT
Sbjct: 382 CWGHNDRGQLG-------------DGTTTARSTPVAVSGLPSGVTAIAAGRLHTCARTSS 428
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG NS GQ + T + P V V +AAGG H+ LT +
Sbjct: 429 GGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGS 479
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++ WG + GQLG S + LP V A +A GGVHTCALT G
Sbjct: 226 EVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTA--------IAAGGVHTCALTGSGG 277
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 117
+ WG +GQLG G T+ R+ P V +P+GV +A G HT
Sbjct: 278 VRCWGANYSGQLGNGL-------------TFGRSTPGAVSGLPSGVTAIAAGDYHTCALT 324
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
G + WG N GQ + +T P V V +AAG H+ L + ++
Sbjct: 325 GSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVR 381
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 28/149 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG GQL D R VA+ G+ + +A GG +TCA TS G +
Sbjct: 635 VWCWGYNLSGQL--------DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVR 686
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG +GQLG G T+ R+ P+ V +P+GV +A G HT M
Sbjct: 687 CWGANGSGQLGDGTTTK-------------RSTPVAVSGLPSGVTAIAAGGEHTCALMSS 733
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G + WG N GQ + + Y +PVD
Sbjct: 734 GGVWCWGRNDSGQLGDGRPLY--RTTPVD 760
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 22 QSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
Q GD R VA+ G+ + +A G +HTCA TS G ++ WG GQLG G T
Sbjct: 390 QLGDGTTTARSTPVAVSGLPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTD 449
Query: 79 SFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
S + P+ V + +GV+ +A G HT G + WG N+ GQ +
Sbjct: 450 S-------------STPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDG 496
Query: 137 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+ Y P V V +AAGG H+ LT +
Sbjct: 497 STIYHITPVAVSGLPSGVTAIAAGGVHTCALTGS 530
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 81/205 (39%), Gaps = 49/205 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG GQLG D R VA+ G+ + +A G +HTCALT G ++
Sbjct: 533 VWCWGGNFAGQLG-------DGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGVW 585
Query: 62 AWGGCQAGQLGLGPQTR-----SFSFIPN------------------------------- 85
WGG GQLG G T + S +P+
Sbjct: 586 CWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645
Query: 86 -ESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
+ T R+ P+ V +P+GV +A G +T G + WG N GQ + +T
Sbjct: 646 LDDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRS 705
Query: 143 YPSPVDWCVGEVRKLAAGGGHSAVL 167
P V V +AAGG H+ L
Sbjct: 706 TPVAVSGLPSGVTAIAAGGEHTCAL 730
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
++ WG GQLG D R VA+ G+ + +A G HTCA S G ++
Sbjct: 176 VWCWGGNYRGQLG-------DGTTTDRSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVW 228
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WGG GQLG G T S + P+ V +P+GV +A G HT
Sbjct: 229 CWGGNNYGQLGDGSYTDS-------------STPVAVSGLPSGVTAIAAGGVHTCALTGS 275
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG N GQ N + P V V +AAG H+ LT +
Sbjct: 276 GGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGDYHTCALTGS 326
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4099 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4155
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4156 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDG 4202
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4252
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4205 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4261
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4262 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4309
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4310 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3995 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4048
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4049 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4093
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4094 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4147
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4049 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4106 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4155
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G YG+ ++ P V G ++ ++A G H+ ++ S+
Sbjct: 4156 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSM 4204
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ S R + +G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS---IRKVSSSKGSDG---------HTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAW 63
+++WG GQLG + K PR + ++ I +ACG H+ AL S G L+AW
Sbjct: 133 LFSWGSNVYGQLGVERMNVVAKARYPR-IQEINLANIVQIACGSNHSLALESTDGVLHAW 191
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG+G TR SFI + IPI QL A G SH+LV G +
Sbjct: 192 GLNDHGQLGIG--TRE-SFIGPTTVNKLMGIPI------CQL-AAGASHSLVLTPSGTVF 241
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
GWG N +GQ + YPS V +V +LA G S +T
Sbjct: 242 GWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVT 287
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
GI + VACG H ALT+ G L++WG GQLG+ + + I +
Sbjct: 111 GIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVV-------AKARYPRIQEI 163
Query: 98 VVPNGVQLVACGHSHTL-VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 155
+ N VQ +ACG +H+L + DG +H WG N +GQ P+ V+ +G +
Sbjct: 164 NLANIVQ-IACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPIC 222
Query: 156 KLAAGGGHSAVLTDA 170
+LAAG HS VLT +
Sbjct: 223 QLAAGASHSLVLTPS 237
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G G+ GQLGH + S EL P++V+ L G + DVACG HT A+T + LYA+G
Sbjct: 292 LFTFGAGTYGQLGHGNQNS---ELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFG 347
Query: 65 GCQAGQLGL 73
+GQLGL
Sbjct: 348 LNTSGQLGL 356
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN--ESDTYFRNIPILV 98
I+ +ACG H+ L G++++ G QLG R PN E+ ++ ++
Sbjct: 54 IRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRK----PNLYENLHWYIDVKQSF 109
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY---AWYPSPVDWCVGEVR 155
V V VACG +H + DG + WG N YGQ E+ A YP + + +
Sbjct: 110 VGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIV 169
Query: 156 KLAAGGGHSAVL 167
++A G HS L
Sbjct: 170 QIACGSNHSLAL 181
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 19/148 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQ+G Q+ +++L P V L + +ACG + A+T+ G L+ +
Sbjct: 240 VFGWGKNMFGQIG----QNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTF 295
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G N++ F + ++ + V VACG HTL + + K++
Sbjct: 296 GAGTYGQLGHG----------NQNSELFPKQVMELMGSVVLDVACGRCHTLA-ITENKLY 344
Query: 124 GWGYNSYGQAA--NEKSTYAW-YPSPVD 148
+G N+ GQ N K T + P P++
Sbjct: 345 AFGLNTSGQLGLLNVKHTTSIPLPIPIE 372
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADEHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL ES R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGL--------MTTEESVAVPRLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRAQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADEHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V ++G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKNGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLTTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
Length = 1884
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH + DK+++P + +L G I+ ++ G HT AL+++G +YA+G
Sbjct: 945 VFTWGWGVHGQLGHGN---TDKKIVPTLITSLLGTVIRYISAGHAHTLALSTEGIVYAFG 1001
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+G +S ++PI +++P + L+ G+ H L K++
Sbjct: 1002 CNIFGQLGVGSNVKS-------------SVPIKVLLPEKIFLITTGYFHNLAVSYTNKLY 1048
Query: 124 GWG 126
WG
Sbjct: 1049 VWG 1051
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 4 DIYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIF---IKDVACGGVHTCALTSKG 58
++YTWG G LG L+ G P + ++ I + V+CG HT A+T+ G
Sbjct: 838 NVYTWGSSVQGCLGTGPSVLRYG-----PPQAISFFKIMEVEVLSVSCGHCHTLAVTNNG 892
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+YAWG + GQLGLG + E TY V+ + V G H++
Sbjct: 893 -VYAWGSSRFGQLGLG---KILQCSTPELITYLAQ---EVIIDAV----AGQYHSVALTA 941
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
DG++ WG+ +GQ + + P+ + +G V R ++AG H+ L+
Sbjct: 942 DGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLALS 992
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 29/136 (21%)
Query: 5 IYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y WG GQLG CS P + L I D G H+ ALT+ G
Sbjct: 893 VYAWGSSRFGQLGLGKILQCST--------PELITYLAQEVIIDAVAGQYHSVALTADGR 944
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
++ WG GQLG G +T + +P L+ ++ ++ GH+HTL
Sbjct: 945 VFTWGWGVHGQLGHG-------------NTDKKIVPTLITSLLGTVIRYISAGHAHTLAL 991
Query: 117 MRDGKIHGWGYNSYGQ 132
+G ++ +G N +GQ
Sbjct: 992 STEGIVYAFGCNIFGQ 1007
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
F + C G L G +Y WG G LG GP + P ++ ++F+ + + V+
Sbjct: 819 FKRRPLCAGFSHVVLIRNGNVYTWGSSVQGCLGTGPSVLRYG--PPQAISFFKIMEVEVL 876
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA- 158
V+CGH HTL +G ++ WG + +GQ K P + + EV A
Sbjct: 877 S-----VSCGHCHTLAVTNNG-VYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAV 930
Query: 159 AGGGHSAVLT 168
AG HS LT
Sbjct: 931 AGQYHSVALT 940
>gi|308505000|ref|XP_003114683.1| hypothetical protein CRE_28429 [Caenorhabditis remanei]
gi|308258865|gb|EFP02818.1| hypothetical protein CRE_28429 [Caenorhabditis remanei]
Length = 174
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL----DGIFIKDVACGGVHTCALTS 56
MH ++ G GQLG + S +P R++ DG +K VACG HT LT
Sbjct: 1 MHAELLGCGQTGEGQLG--ARLSEPMIRVPERIIGAPNDADGTAVKSVACGEQHTVFLTK 58
Query: 57 KGALYAWGGCQAGQLGLGPQTR-SFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHT 113
G +++ G GQLG G ++ SFS P + + +GV++V A G +H+
Sbjct: 59 DGKMWSVGSNLDGQLGRGKRSEGSFSIYP------------VSLTSGVEIVQIAAGRAHS 106
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
+ DG++ WG N +GQ E S+ W +P + EV ++A+G H LTD
Sbjct: 107 VAVADDGRVFAWGSNEHGQLGME-SSVVWQETPKRIKELNEVVQVASGSDHCIALTD 162
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 47 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 101
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 102 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 151
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 152 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 202
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
R + +L I I VACG H+ AL+ ++ WG + GQLGLG + S
Sbjct: 19 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-----QTSPQL 73
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
++ +L +P VA G +H+ V G I GWG N +GQ + P+ +
Sbjct: 74 LKS--LLGIP--FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 129
Query: 151 VGE-VRKLAAGGGHSAVLT 168
+ + + G H+A LT
Sbjct: 130 RSQKIVYICCGEDHTAALT 148
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 153 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 209
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 210 GLGGNGQLGTG 220
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 35/188 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL--------- 54
++T+G GS G LGH +S +PR V L G+ + VACG HT AL
Sbjct: 414 QLFTFGDGSFGALGHGDRRSTS---VPREVKILSGLIVTKVACGVWHTAALVEVTNEASE 470
Query: 55 ----TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVA 107
+S+G ++ WG + GQLG G D + +P V+ + VA
Sbjct: 471 AEVGSSRGQVFTWGDGEKGQLGHG-------------DNDAQLLPECVISLSNENICQVA 517
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSA 165
CGHS T+ G ++ G +YGQ N + +P+ V D V ++A G H A
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN-PTAKGNFPARVEGDIVEASVEEIACGSYHVA 576
Query: 166 VLTDACSL 173
VLT +
Sbjct: 577 VLTSKSEI 584
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G GQLGH D +LLP V++L I VACG T +LTS G +Y
Sbjct: 479 QVFTWGDGEKGQLGH---GDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTM 535
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG P + + +V V+ +ACG H V +I+
Sbjct: 536 GSTAYGQLG----------NPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIY 585
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVL 167
WG GQ + P+ V + +V+ + G +AV+
Sbjct: 586 TWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P+ + ++ G+ K +ACG HTCA+T G LY+WG LG S +IP
Sbjct: 330 PKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 389
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ + V VACG HT V G++ +G S+G + P V
Sbjct: 390 ALQGL-------YVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKI 442
Query: 150 CVGE-VRKLAAGGGHSAVLTD 169
G V K+A G H+A L +
Sbjct: 443 LSGLIVTKVACGVWHTAALVE 463
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 4 DIYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
D++ WG G + G+ + + LLP+ + + + +++ACG H +T +G
Sbjct: 248 DVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGE 307
Query: 60 LYAWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
+++WG + G+LG G +T + FI + F+++ ACG HT
Sbjct: 308 IFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSL------------ACGDFHTCAIT 355
Query: 118 RDGKIHGWGYNSYGQA----ANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLTDAC 171
+ G ++ WG ++ NE S W P V + V +A G H+AV+ +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESS--CWIPKRVTGALQGLYVSYVACGPWHTAVVASSG 413
Query: 172 SL 173
L
Sbjct: 414 QL 415
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG--IFIKDVACGGVHTCALTSKGALY 61
D+YTWGLG GQLGH L+S L P++V+ + I VA G T A++ G L+
Sbjct: 302 DLYTWGLGVFGQLGHGKLKS---LLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELF 358
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPN-ESDTYFR-NIPILVV---PNGVQLVACGHSHTLVY 116
++G + GQLG T+ + N + D + + ++P V V+ VACGH HT+
Sbjct: 359 SFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAV 418
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
D ++ WG+ S G + P V G E+ ++ G H+ ++
Sbjct: 419 TTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIV 470
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG GQLG GD+ PR + +L I ++ACG H A++ G LY
Sbjct: 250 NVYTWGFNEKGQLG-----LGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLY 304
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQLG G + S + + YF +V VA G + T+ +G+
Sbjct: 305 TWGLGVFGQLGHG---KLKSLLHPKKVLYFEQQQKKIVQ-----VATGANFTMAVSENGE 356
Query: 122 IHGWGYNSYGQ-AANEKSTYA-W-----------YPSPVDWCVGE---VRKLAAGGGHS- 164
+ +G+ YGQ A E + Y W Y P E VRK+A G H+
Sbjct: 357 LFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTI 416
Query: 165 AVLTD 169
AV TD
Sbjct: 417 AVTTD 421
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ + ++G+G GQLG L +L P + L G IK +ACG H+ A+T G +Y+
Sbjct: 1 MSVISFGVGKQGQLG---LDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYS 57
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG P ++ T + + + VACG+ H+L GK+
Sbjct: 58 WGRGKEGELGH----------PQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKV 107
Query: 123 HGWG 126
+ WG
Sbjct: 108 YQWG 111
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 4 DIYTWGLGSVGQLGHCS-------LQSGDKE-----LLPRRVVALDGIFIKDVACGGVHT 51
+++++G G GQLG +GD++ LP++V AL+ + ++ VACG +HT
Sbjct: 356 ELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHT 415
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS 111
A+T+ +Y WG +G LG G R F +P + +P L + V+ G
Sbjct: 416 IAVTTDNDVYTWGWGSSGCLGFG--DRKFQLVP-------QRVPSL-SGEEISSVSGGEK 465
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKST 139
HTL+ +R + ++ Y Q N++ T
Sbjct: 466 HTLI-VRSSDTTTFAFD-YKQLVNDQKT 491
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
I I D++ G ++ A+TS G +Y WG + GQLGLG D ++ P ++
Sbjct: 230 IKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLG-------------DRWYHGNPRVI 276
Query: 99 VP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ +ACG H + G ++ WG +GQ + K +P V + + +
Sbjct: 277 RSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQK 336
Query: 156 KLA 158
K+
Sbjct: 337 KIV 339
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 161
++ +ACG +H+L G ++ WG G+ + + P+ + E + K+A G
Sbjct: 36 IKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPALIKALEHERIVKVACGN 95
Query: 162 GHSAVLTDA 170
HS LTD
Sbjct: 96 YHSLALTDT 104
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSG--DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G+C L +G ++ L P +V +L I D+ACG H+ AL G +YA
Sbjct: 151 VYSWG-----HNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYA 205
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ G T +P + ++ V +ACG + T+ + +G++
Sbjct: 206 WGQNNCGQAGSSITTN--QGVPRQVNSNLAG-------KKVAQIACGQTSTVALLENGEV 256
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTD 169
+GWGYN GQ P + +G V K+A G H+ LTD
Sbjct: 257 YGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTD 304
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+IY WG + GQ G S+ + +PR+V + L G + +ACG T AL G +Y
Sbjct: 202 EIYAWGQNNCGQAGS-SITTNQG--VPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYG 258
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG+G + P T + + VACG+ HTL +G++
Sbjct: 259 WGYNGVGQLGIGNYVNQMT--PCRIGTLLGTV--------IVKVACGYVHTLALTDEGQL 308
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ T A P V +G V +AA
Sbjct: 309 YVWGGNSYGQLGISNKTNACNPVLVKHEMGRVSDIAA 345
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 20/128 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG VGQLG + + ++ P R+ L G I VACG VHT ALT +G LY W
Sbjct: 255 EVYGWGYNGVGQLG---IGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVW 311
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
GG GQLG+ +T + + P+LV + + A ++HT V + +
Sbjct: 312 GGNSYGQLGISNKTNACN-------------PVLVKHEMGRVSDIAALHYNHTSVAVGEG 358
Query: 120 GKIHGWGY 127
G+++ WG+
Sbjct: 359 GRVYMWGH 366
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4101 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4158 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDG 4204
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4254
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4207 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL +G +
Sbjct: 4264 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASNGDV 4311
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ + + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LVEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3997 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4050
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4051 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4095
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4096 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4051 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4108 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4157
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLTD 169
G YG+ ++ P V G ++ ++A G H+ AV TD
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTD 4203
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG S GQLG + L V +G+ +K VA GG H A+ S L+AWG
Sbjct: 58 VWTWGANSGGQLGDGTTA---YRLASAPVDFSNGMVVKRVAAGGSHALAVLSDKTLWAWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS--HTLVYMRDGKI 122
GQLG+G T SFS + T GV++VA S ++ + DGK+
Sbjct: 115 RNGDGQLGVGSTTSSFSPVKVPGRT------------GVEVVAMAASTFNSAAVLSDGKV 162
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN+YGQ N +T P V + +++ ++ G H L
Sbjct: 163 LTWGYNAYGQLGNGSTTDQSSPVEVS-ALSDIKGVSVGKYHMLAL 206
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG SL P +V L+ + V G H+ AL S G ++AWG
Sbjct: 639 VWAWGRNNSGQLGDGSLV---DRTRPVQVARLNRVV--SVVAGLYHSLALRSDGTVWAWG 693
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
+GQLG G TYF + + VP +GV VA G H+L DG +
Sbjct: 694 DNGSGQLGDG--------------TYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTV 739
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE---VRKLAAGGGHS-AVLT 168
WGYNS GQ + ++ + PSPV V +AAG HS AVL+
Sbjct: 740 WAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLS 790
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG S P +V L G+ +VA G H AL G ++AWG
Sbjct: 264 VWAWGQNNQGQLGIGSFT---DRPSPVQVPRLTGVV--EVAAGQFHALALRLDGTVWAWG 318
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G T R+ P+ V GV VA G H++ + DG+++
Sbjct: 319 FNGSGQLGDG-------------TTLSRSSPVQVPGLTGVVSVAAGDGHSVAVLSDGRVY 365
Query: 124 GWGYNSYGQAANEKSTYAWYPSP 146
WG NS GQ + +P+P
Sbjct: 366 TWGRNSAGQLGDGSQDALPHPTP 388
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P++ L G+ V+ G H+ AL G ++AWG GQLG+G SF+ P+
Sbjct: 236 PQQAAVLKGV--ASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIG----SFTDRPSPV-- 287
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+P L GV VA G H L DG + WG+N GQ + + P V
Sbjct: 288 ---QVPRLT---GVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPG 341
Query: 150 CVGEVRKLAAGGGHS-AVLTD 169
G V +AAG GHS AVL+D
Sbjct: 342 LTGVV-SVAAGDGHSVAVLSD 361
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + ++LP +V L G+ VA GG H+ AL + G ++AWG
Sbjct: 689 VWAWGDNGSGQLGDGTYFG---QMLPVQVPGLSGVVA--VAAGGRHSLALRADGTVWAWG 743
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+G G S + P+ F + + V VA G +H++ + G++
Sbjct: 744 YNSNGQIGDGSDA-SIIYRPSPVKVLFSSQDV------VMGVAAGDTHSVAVLSGGRVRT 796
Query: 125 WGYNSYGQ 132
WG N GQ
Sbjct: 797 WGQNDSGQ 804
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S L P V +K+VA GG H+ AL S G L++WG
Sbjct: 481 LWAWGHNFSGQLGDDSTV---NRLTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWG 537
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
QLG+ T P ++ +GV VA G +H+LV + +GK+
Sbjct: 538 SNSLSQLGVSRDTLGSRASP----------ALVSGVSGVVAVAAGETHSLVVLSNGKVSA 587
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG--------EVRKLAAGGGHSAVL 167
WGYN YGQ + S P P +C + +AAG HS L
Sbjct: 588 WGYNGYGQIGDGCS-----PVPTFYCSSPTEPTNLFSILGVAAGQNHSLAL 633
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG + GQLG+ S + P V AL I K V+ G H AL S G ++AW
Sbjct: 162 VLTWGYNAYGQLGNGSTT---DQSSPVEVSALSDI--KGVSVGKYHMLALRSGGTVWAW- 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G + + S+T + V GV V+ G SH+L DG +
Sbjct: 216 ---------GFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWA 266
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N+ GQ ++ PSPV
Sbjct: 267 WGQNNQGQLG--IGSFTDRPSPV 287
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS- 164
A G ++TL+ DG + WG NS GQ + + Y +PVD+ G V+++AAGG H+
Sbjct: 43 AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHAL 102
Query: 165 AVLTDAC--SLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGD 220
AVL+D + + +L T S+ S ++ V RTG E +A + D
Sbjct: 103 AVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVK-VPGRTGVEVVAMAASTFNSAAVLSD 159
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ WG GQ+G CS P L I VA G H+ AL S G ++AW
Sbjct: 585 VSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNL--FSILGVAAGQNHSLALRSDGTVWAW 642
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKI 122
G +GQLG G S + R P+ V N V V G H+L DG +
Sbjct: 643 GRNNSGQLGDG------SLVD-------RTRPVQVARLNRVVSVVAGLYHSLALRSDGTV 689
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ + P V G V +AAGG HS L
Sbjct: 690 WAWGDNGSGQLGDGTYFGQMLPVQVPGLSGVV-AVAAGGRHSLAL 733
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 45 ACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ 104
A G +T G+++ WG GQLG G + P + F N + V+
Sbjct: 43 AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVD----FSNGMV------VK 92
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 163
VA G SH L + D + WG N GQ +T ++ P V G EV +AA +
Sbjct: 93 RVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFN 152
Query: 164 S-AVLTD 169
S AVL+D
Sbjct: 153 SAAVLSD 159
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 16/106 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--- 100
+ G T + G L+AWG +GQLG + T R P+ V
Sbjct: 465 LVAGAKFTLFQKNDGKLWAWGHNFSGQLG-------------DDSTVNRLTPVSVSTASL 511
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
V+ VA G H+L DGK+ WG NS Q + T SP
Sbjct: 512 TDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASP 557
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQ+G S S P +V+ + VA G H+ A+ S G + WG
Sbjct: 739 VWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWG 798
Query: 65 GCQAGQLG 72
+GQLG
Sbjct: 799 QNDSGQLG 806
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 53 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 107
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 108 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 157
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 158 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 208
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
R + +L I I VACG H+ AL+ ++ WG + GQLGLG + S
Sbjct: 25 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-----QTSPQL 79
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
++ +L +P VA G +H+ V G I GWG N +GQ + P+ +
Sbjct: 80 LKS--LLGIP--FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 135
Query: 151 VGE-VRKLAAGGGHSAVLT 168
+ + + G H+A LT
Sbjct: 136 RSQKIVYICCGEDHTAALT 154
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 159 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 215
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 216 GLGGNGQLGTG 226
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4100 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4157 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4203
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4253
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4206 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4263 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4310
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3996 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4049
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4050 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4107 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4156
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4087 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4143
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4144 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4190
Query: 121 KIH-GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4240
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4193 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4250 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4297
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4298 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
+ +G G+ + + + P ++ G +RK+ AG
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + +LTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3983 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4036
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4037 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4081
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4082 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4037 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4094 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4143
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4144 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4187
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4101 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4158 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4204
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4254
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4207 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL G +
Sbjct: 4264 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLALASTGDV 4311
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3997 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4050
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4051 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4095
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4096 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4051 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4108 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4157
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4201
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
Length = 1196
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D YTWG G+ G LGH + + + L+ + + LD + VAC A+ G L+ W
Sbjct: 929 DAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLD---VSMVACENSAGAAVMFTGELFTW 985
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G + G+LG +E+ FRN+P V+ +A G +H+ + DG +
Sbjct: 986 GKGEKGRLG------------HET---FRNMP-------VKQIAAGSAHSGCITEGDGAV 1023
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+ WG YGQ N +T+A P V + + ++L G H VL + S+
Sbjct: 1024 YMWGSGIYGQIGNNTNTHALTPMRVKFGKLKAKQLVCGVNHVLVLMEDGSV 1074
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 34/169 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT-CALTSKGALYA 62
+++TWG G G+LGH + ++ +P +K +A G H+ C GA+Y
Sbjct: 981 ELFTWGKGEKGRLGHETFRN-----MP----------VKQIAAGSAHSGCITEGDGAVYM 1025
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV---QLVACGHSHTLVYMRD 119
WG GQ+G T + + P+ V + QLV CG +H LV M D
Sbjct: 1026 WGSGIYGQIGNNTNTHALT-------------PMRVKFGKLKAKQLV-CGVNHVLVLMED 1071
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
G ++GWG +YG+ N + P +++ + VR L AGG SA +
Sbjct: 1072 GSVYGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAV 1120
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4091 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4147
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4148 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4194
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4244
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4197 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4253
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4254 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4301
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4302 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3987 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4040
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4041 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4085
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4086 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4139
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4041 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4098 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4147
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4148 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4191
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4094 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4150
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4151 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4197
Query: 121 KIH-GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4200 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4257 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4304
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4305 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
+ +G G+ + + + P ++ G +RK+ AG
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + +LTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3990 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4043
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4044 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4088
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4089 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4044 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4101 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4150
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4151 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4194
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
Length = 1207
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 25/180 (13%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+ ++++WG GQLG S K+ ++PR I I V+CG H+ +TS
Sbjct: 62 YTEVFSWGSDKFGQLGLGKQISSQKQFHMVPR--FCSYNIPITQVSCGTSHSVFITSSQL 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVY 116
+Y+ G GQLG+ ++ T ++ P+LV V + ++CG++HTL
Sbjct: 120 IYSMGSNLQGQLGI-----------DDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLAL 168
Query: 117 MRDGKIHGWGYNSYGQAANEKSTY----AWYPSPV---DWCVGEVRKLAAGGGHSAVLTD 169
MRDG+++ WG N GQ + S + W P V D+ ++++ +G HS + +
Sbjct: 169 MRDGEVYSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDE 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 4 DIYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGI---FIKDVACGGVHTCAL 54
++Y+WG GQ G H +Q K +V D FIK + G H+ +
Sbjct: 173 EVYSWGSNENGQCGSGASPFHTVVQWAPK------IVKFDDYQRPFIKQIDSGAFHSGFV 226
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G L+ G GQLG + S+ S Y IP +Q VACG HT+
Sbjct: 227 DEIGRLFMCGKGDQGQLG------NMSYQDELSPFYISKIP-----EKIQEVACGDDHTV 275
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
V R+G+I+ G NS GQ S+ PV
Sbjct: 276 VLTRNGEIYTMGSNSRGQLGTGPSSSRGSNVPV 308
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 78/209 (37%), Gaps = 41/209 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ G G GQLG+ S Q EL P + + I++VACG HT LT G +Y G
Sbjct: 232 LFMCGKGDQGQLGNMSYQD---ELSPFYISKIPEK-IQEVACGDDHTVVLTRNGEIYTMG 287
Query: 65 GCQAGQLGLGPQTRSFSFIPN--ESDTYFRNIPI--------LVVPNGVQLVACG----- 109
GQLG GP + S +P + + R I L V N + L CG
Sbjct: 288 SNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFSASLSVDNQLYLWGCGTFGEF 347
Query: 110 ---------------------HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
V R G ++ WG N GQ S P V+
Sbjct: 348 FTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTPHRVE 407
Query: 149 WCVGE-VRKLAAGGGHSAVLTDACSLKEL 176
G+ V ++ G + L +K+L
Sbjct: 408 ALDGKRVTQITCGRDYVIALGLTLPIKDL 436
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4106 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTF 4162
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4163 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4209
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4259
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4212 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4269 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4316
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ + G+ +R+++AG HSA T
Sbjct: 4317 YAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4363
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A++ G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4002 DVYLWGAGRHGQLA----EAGRNVMIPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4055
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4056 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4100
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4101 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT 4154
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4056 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4112
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L +Q+ +CG H+ V DGK+ +
Sbjct: 4113 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVIQM-SCGFKHSAVVTSDGKLFTF 4162
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4163 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4206
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDG+ I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4031 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTF 4087
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4088 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4134
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4184
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4137 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4193
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ +A G HTL G +
Sbjct: 4194 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDIAVGAEHTLALASTGDV 4241
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ + G+ +R+++AG HSA T
Sbjct: 4242 YAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWT 4288
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3927 DVYLWGAGRHGQLA----EAGRNVMIPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 3980
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 3981 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4025
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4026 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT 4079
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 3981 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4037
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L +Q+ +CG H+ V DGK+ +
Sbjct: 4038 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVIQM-SCGFKHSAVVTSDGKLFTF 4087
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4088 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4131
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDG+ I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+WGL S G+LG S +P +++ L I +ACG H+ AL G +YAWG
Sbjct: 242 IYSWGLCSYGKLGQYSKNDCP---IPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWG 298
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLV--ACGHSHTLVYMRDG 120
G+LGL N++D ++P +V P+ V++V ACG H++ +DG
Sbjct: 299 NGAGGRLGL-----------NKTDVV--SLPTMVAHFPDQVKVVGIACGQDHSMAVCQDG 345
Query: 121 KIHGWGYNSYGQAANEKST-YAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ WG +G+ + P V+ + ++++ G HS LT+
Sbjct: 346 RVFSWGQAGFGKLGYSNPMGFQSTPRRVE-SIPACKQVSCGNWHSLTLTN 394
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG G+ G+LG L D LP V D + + +ACG H+ A+ G +++W
Sbjct: 294 VYAWGNGAGGRLG---LNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSW 350
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG F P ++ IP + V+CG+ H+L G ++
Sbjct: 351 GQAGFGKLGYS-NPMGFQSTPRRVES----IP------ACKQVSCGNWHSLTLTNGGDVY 399
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+G N G+ E +T P+ V + +++K+ AG +AVLT +
Sbjct: 400 AFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTS 447
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y +G + G C + E P RV+ I IK + G LT+ +Y W
Sbjct: 397 DVYAFG---SNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTW 453
Query: 64 GGCQAGQLGLGPQTRS------------------FSFIPNESDTYFRNIPILVVPNGVQL 105
G GQLG+ +T+S ++ N++ TY + ++P +
Sbjct: 454 GNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPINN 513
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ G+ H +V G++ +G N Q
Sbjct: 514 IEVGYEHVVVLTDAGEVITFGSNQMDQ 540
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 53/200 (26%)
Query: 5 IYTWGLGSVGQLGHCS---LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+++WG G+LG+ + QS PRRV ++ K V+CG H+ LT+ G +Y
Sbjct: 347 VFSWGQAGFGKLGYSNPMGFQST-----PRRVESIPAC--KQVSCGNWHSLTLTNGGDVY 399
Query: 62 AWGGCQAGQLGLGPQTRSFSFI--PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A+G + G+ G R + + P + NI I + G+ A + ++Y
Sbjct: 400 AFGSNREGRCG-----RELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYT-- 452
Query: 120 GKIHGWGYNSYGQ----------------------------AANEKSTYAWYPSPVDWCV 151
WG N GQ AA TY + P V +
Sbjct: 453 -----WGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLL 507
Query: 152 G-EVRKLAAGGGHSAVLTDA 170
+ + G H VLTDA
Sbjct: 508 PYPINNIEVGYEHVVVLTDA 527
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ +V GG LT G +Y+WG C G+ LG +++ IP++ I+ +
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGK--LGQYSKNDCPIPSQ---------IMELK 271
Query: 101 NG-VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK--L 157
N + +ACG H+L G ++ WG + G+ K+ P+ V +V+ +
Sbjct: 272 NKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGI 331
Query: 158 AAGGGHSAVL 167
A G HS +
Sbjct: 332 ACGQDHSMAV 341
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4101 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4158 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4204
Query: 121 KIH-GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4254
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4207 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4264 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4311
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3997 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4050
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4051 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4095
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4096 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4051 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4108 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4157
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4201
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G S L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSXCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 RHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +AL + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S G LG G+ LP +V L + VA G +H+ ALT G ++AWG
Sbjct: 313 VWVWGHNSYGVLGS---NVGEHSFLPVQVKGLKNVVA--VAAGRLHSVALTKNGTIWAWG 367
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
GQLG E++++ N+P V + V +A G SHTL RDG +
Sbjct: 368 NNAFGQLG------------RENNSFSLNLPYKVKWLDNVVAIAAGGSHTLAIKRDGTVW 415
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHS 164
WG N+ GQ N ++ P+ CV + K + AG HS
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPT----CVKGLNKAVLVEAGSQHS 455
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 11 GSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
G+V G +L + +K L P ++ L G+ VA G H+ AL G +++WG
Sbjct: 564 GTVWSWGDTNLDNKEKYLNFSEKPVKIKGLSGVV--KVAAGKYHSLALKKDGTVWSWGYN 621
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G TR SF+P N V +A G H++ +DG + WG
Sbjct: 622 AYGQLGNG--TRETSFVPVRVKGL----------NNVVAIAAGDYHSMALKKDGTVWVWG 669
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
N GQ ++ P V+ + V +AAG HS L
Sbjct: 670 SNIRGQLGRRNIEFSTVPLKVEK-LDNVVAIAAGDTHSVAL 709
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G+LG+ + + P RV L + ++ GG H+ AL GA++ WG
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSV-PVRVKGLSDVIA--ISAGGFHSIALNKDGAVWIWG 269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
G I IP+ + N V +A G+ H++ DG +
Sbjct: 270 G---------------GIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVW 314
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG+NSYG + +++ P V + V +AAG HS LT
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVK-GLKNVVAVAAGRLHSVALT 358
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
I+ WG + GQLG ++ L LP +V LD + +A GG HT A+ G +++W
Sbjct: 363 IWAWGNNAFGQLGR---ENNSFSLNLPYKVKWLDNVVA--IAAGGSHTLAIKRDGTVWSW 417
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T S+IP T + + N LV G H+L +DG +
Sbjct: 418 GANNKGQLGNG--TYKSSYIP----TCVKGL------NKAVLVEAGSQHSLAVDKDGTVW 465
Query: 124 GWGY 127
WG+
Sbjct: 466 VWGF 469
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 32 RVVALDGI-FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
+++ LD I ++ +A G H+ A+ + G +++WG L + + +F +E
Sbjct: 537 KLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWG-----DTNLDNKEKYLNF--SEKPVK 589
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
+ + +GV VA G H+L +DG + WGYN+YGQ N ++ P V
Sbjct: 590 IKGL------SGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVK-G 642
Query: 151 VGEVRKLAAGGGHSAVL 167
+ V +AAG HS L
Sbjct: 643 LNNVVAIAAGDYHSMAL 659
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG+ + ++ +P RV L+ + +A G H+ AL G ++ WG
Sbjct: 615 VWSWGYNAYGQLGNGTRET---SFVPVRVKGLNNVVA--IAAGDYHSMALKKDGTVWVWG 669
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + F +P+ V + V +A G +H++ +DG +
Sbjct: 670 SNIRGQLG-------------RRNIEFSTVPLKVEKLDNVVAIAAGDTHSVALKKDGTVW 716
Query: 124 GWG 126
WG
Sbjct: 717 VWG 719
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + G+LG SL+ +P +V L + V+ G H+ AL G +++WG
Sbjct: 163 VWAWGINNHGELGIGSLKP---SAVPVKVKGLKDVVA--VSAGLYHSLALKRDGTVWSWG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ G+LG P ++ Y ++P+ V + V ++ G H++ +DG +
Sbjct: 218 YNEDGELGNRP-----------TEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVW 266
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG + N K ++ P + W + +V +AAG HS L D
Sbjct: 267 IWGGGIIEK--NGKIDNSYIPVRIRW-LNKVVAIAAGYRHSIALKD 309
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G + A+ S G+++AWG G+LG+G S P+ + + +V
Sbjct: 147 IAAGWDFSLAVGSDGSVWAWGINNHGELGIG------SLKPSAVPVKVKGLKDVVA---- 196
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGG 162
V+ G H+L RDG + WGYN G+ N + PV + +V ++AGG
Sbjct: 197 --VSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGF 254
Query: 163 HSAVL 167
HS L
Sbjct: 255 HSIAL 259
Score = 45.4 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL 105
G +HT A+ G ++AWG GQLG G S IP+ V V
Sbjct: 50 GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSC-------------IPVRVKGLKDVVA 96
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
V+ G H+L +DG + WG+ +YGQ ++ Y + +PV V E++ + A
Sbjct: 97 VSAGTFHSLALKKDGSVWIWGHTNYGQRKSD--VYRDFTTPVK--VKELKNIVA 146
>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Camponotus floridanus]
Length = 1719
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH + D+++ P V AL G+ ++ ++ G HT AL+ G +YA+G
Sbjct: 939 VFTWGWGIHGQLGH---GNTDEKITPSLVTALLGVVVRCISAGYAHTLALSVDGIVYAFG 995
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + S IP + + +P+G+ L+ G+ H L K++
Sbjct: 996 SNVLGQLGIGGNAK--SSIPTK----------ISLPDGIILINTGYFHNLALSDTNKLYV 1043
Query: 125 WG 126
WG
Sbjct: 1044 WG 1045
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
+IYTWG G LG S L+ G P + + ++ V+CG HT A+T+ G
Sbjct: 832 NIYTWGSSVQGCLGTGSSVLRYG----APHAICFFRSMEVEVFSVSCGHCHTLAVTNNG- 886
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVY 116
+YAWG Q GQLGLG + S P L++ +++ G H++
Sbjct: 887 IYAWGSSQFGQLGLGKVLQCSS-------------PELIISLAQEIIIDAVAGQYHSVAL 933
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
DG++ WG+ +GQ + + PS V +G VR ++AG H+ L+
Sbjct: 934 TADGRVFTWGWGIHGQLGHGNTDEKITPSLVTALLGVVVRCISAGYAHTLALS 986
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 5 IYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
IY WG GQLG LQ EL +++L I D G H+ ALT+ G ++ W
Sbjct: 887 IYAWGSSQFGQLGLGKVLQCSSPEL----IISLAQEIIIDAVAGQYHSVALTADGRVFTW 942
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G N + ++ ++ V+ ++ G++HTL DG ++
Sbjct: 943 GWGIHGQLGHG----------NTDEKITPSLVTALLGVVVRCISAGYAHTLALSVDGIVY 992
Query: 124 GWGYNSYGQ---AANEKST 139
+G N GQ N KS+
Sbjct: 993 AFGSNVLGQLGIGGNAKSS 1011
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 34 VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN 93
+AL F + G AL G +Y WG G LG G + + +FR+
Sbjct: 807 IALHVDFKRRSLSAGFSHVALIRNGNIYTWGSSVQGCLGTGSSVLRYG--APHAICFFRS 864
Query: 94 IPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
+ + V V+CGH HTL +G I+ WG + +GQ K P + E
Sbjct: 865 MEVEVFS-----VSCGHCHTLAVTNNG-IYAWGSSQFGQLGLGKVLQCSSPELIISLAQE 918
Query: 154 VRKLA-AGGGHSAVLT 168
+ A AG HS LT
Sbjct: 919 IIIDAVAGQYHSVALT 934
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG +GQLG L D E P V ALD ++ +ACGG HT LT G ++ +
Sbjct: 120 NIYSWGRNDLGQLG---LGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTF 176
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD- 119
G + GQLG N + R P LV G+++ VACG HTL Y+ D
Sbjct: 177 GAGKHGQLG-----------HNSTQNELR--PRLVTELTGIRVTQVACGRRHTLAYVSDL 223
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----------LAAGGGHSAVL 167
GK+ +G GQ N + P P+ E K + AGG S +L
Sbjct: 224 GKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSILL 282
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R F+ IP P LV
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIG---RLFASIPT---------PQLVEH 96
Query: 101 -NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 156
+GV LV + G +H++ G I+ WG N GQ + +PS V+ + V
Sbjct: 97 LSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEF 156
Query: 157 LAAGGGHSAVLTD 169
LA GG H+A+LT+
Sbjct: 157 LACGGSHTALLTE 169
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 67 ELFAWGQNLHGQLGIGRLFASIPT--PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSW 124
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG + F ++ + V+ +ACG SHT + DG++
Sbjct: 125 GRNDLGQLGLG----------HTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVF 174
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+G +GQ + + P V G V ++A G H+
Sbjct: 175 TFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHT 216
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 2748 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2804
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 2805 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 2851
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 2901
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 2854 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2910
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 2911 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 2958
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 2959 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 2644 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 2697
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 2698 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 2742
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 2743 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2796
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 2698 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2754
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 2755 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 2804
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 2805 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 2848
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ VVAL G + VACG T ALT GA
Sbjct: 3142 ELYTWGLGEYGRLGH-----GDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGA 3196
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3197 VFSWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRA 3246
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3247 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3298
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 3091 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3147
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LVV V VACG + TL D
Sbjct: 3148 LGEYGRLGHG-------------DNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTED 3194
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3195 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 3246
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4152 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4208
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4209 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4258
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4259 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4308
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++ TWG G+ +LGH + D LP VVAL + DVA G H+ ALTS+G ++
Sbjct: 685 NLLTWGRGTYARLGHGN---SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 741
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ V G +L +
Sbjct: 742 AWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQRVFAGSQFSLALSSE 787
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 788 GQLYSWG 794
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ Y+WG G +LGH GD +P ++ AL+ ++ V CG ++ A+T G L
Sbjct: 633 NAYSWGTGEDHRLGH-----GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVY 116
WG +LG G N D R++P LVV +V G +H+L
Sbjct: 688 TWGRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVALGSGDAHSLAL 734
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+G + WG YG+ N + P V+ + V+++ AG S L+
Sbjct: 735 TSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSLALS 785
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4258 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTW 4314
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4315 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4362
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4363 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3248 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3303
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3304 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3347
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4116 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM----- 4170
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4171 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4222
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4223 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4251
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3037 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3093
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ VACG SH+
Sbjct: 3094 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3140
Query: 120 GKIHGWGYNSYGQ 132
G+++ WG YG+
Sbjct: 3141 GELYTWGLGEYGR 3153
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 3197 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3253
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3254 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3301
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3302 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3344
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 10 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVHTCALTSKGALYAWGGCQA 68
L G+L L + E LP VA + +FI C G H A+ S Y+WG +
Sbjct: 584 LSQEGKLYTWRLAKPEAEPLPMEEVAHE-VFISIAGHCEGRHFLAIDSNHNAYSWGTGED 642
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGW 125
+LG G DT+ R +P + + VQ V CG S++ G + W
Sbjct: 643 HRLGHG-------------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 689
Query: 126 GYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLT 168
G +Y + + S P+ V D V +V L +G HS LT
Sbjct: 690 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-ALGSGDAHSLALT 735
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 2985 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 3041
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3042 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3093
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS 3138
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDQGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDQGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4097 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4154 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4200
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4203 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4260 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4307
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3993 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4046
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4047 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4091
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4092 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4145
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4047 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4104 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4153
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4154 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4197
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4111 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4167
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4168 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4214
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4264
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4217 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4274 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4321
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4322 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4007 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4060
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4061 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4105
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4106 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4061 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4118 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4167
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4168 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4211
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y WG G G LG GDK + P ++ ALDG + ACG T + G +YA
Sbjct: 264 EAYVWGRGIDGSLG----VEGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYAC 319
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G + GQLG+G NE+ + P LV +P + +ACG+SH + G+
Sbjct: 320 GNNEHGQLGIG---------SNEAMSE----PTLVTNLPERIVRIACGNSHAVALSETGR 366
Query: 122 IHGWGYNSYGQ-AANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDA 170
++ WG +S GQ E P V+ V +V A GG H+ +L+++
Sbjct: 367 LYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNS 418
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++Y G GQLG S ++ + L P R+V +ACG H AL+ G
Sbjct: 315 EVYACGNNEHGQLGIGSNEAMSEPTLVTNLPERIV--------RIACGNSHAVALSETGR 366
Query: 60 LYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
LYAWG +GQLG+G P S + ES+ VV + V ACG +HT++
Sbjct: 367 LYAWGAHSSGQLGVGEPLEDRLSPVRVESN---------VVRDDVADFACGGNHTIILSN 417
Query: 119 DGKIHGWGYNSYGQ------AANEKSTYAWYPSP 146
G ++ +G + GQ A ++T A P+P
Sbjct: 418 SGLLYAFGSGAQGQLGLGPLATKNQATPAALPNP 451
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGALY 61
+Y WG S GQLG + + L P RV V D + D ACGG HT L++ G LY
Sbjct: 367 LYAWGAHSSGQLG--VGEPLEDRLSPVRVESNVVRDDV--ADFACGGNHTIILSNSGLLY 422
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
A+G GQLGLGP P L P G + ++CG +
Sbjct: 423 AFGSGAQGQLGLGPLATKNQATP----------AALPNPEGRKYTAISCGQDISAAVSDR 472
Query: 120 GKIHGWG 126
GKI+ WG
Sbjct: 473 GKIYTWG 479
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 81/211 (38%), Gaps = 44/211 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G+ G LGH D E PR V AL G IK + G HT AL G +Y+W
Sbjct: 160 DVYTWGEGTRGMLGH---GEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSW 216
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYF--------RNIPILVVPNGVQLV--------- 106
G G+LG G + F+ + F N + V NG V
Sbjct: 217 GLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSL 276
Query: 107 ------------------------ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
ACG + TL + G+++ G N +GQ +
Sbjct: 277 GVEGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMS 336
Query: 143 YPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
P+ V + ++A G H+ L++ L
Sbjct: 337 EPTLVTNLPERIVRIACGNSHAVALSETGRL 367
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G G+ GQLG L + + + P + +G ++CG + A++ +G +Y WG
Sbjct: 421 LYAFGSGAQGQLGLGPLATKN-QATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWG 479
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ LGL P+ Y + + + VACG H + IHG
Sbjct: 480 SGASNALGL----------PDGRTKYAPTLIESMADKRCRTVACGFFHMAATI----IHG 525
Query: 125 W 125
W
Sbjct: 526 W 526
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 25/179 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG---IFIKDVACGGVHTCALTSKGAL 60
++YTWG GQLGH L+ LP+RV G IF+ V CGG HT A+ S +
Sbjct: 1142 ELYTWGSNQSGQLGH-GLEVNKTLSLPKRVDFFRGKSPIFM--VECGGEHTIAVDSNYFV 1198
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+WG + GQLG G + N+S + + +Q +A G +H +V + G
Sbjct: 1199 YSWGSDKFGQLGHGTKA------VNQSRP---KVIEELTGQKIQAIAAGFAHNIVLKKSG 1249
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV----------GEVRKLAAGGGHSAVLTD 169
++ +GY +GQ P+ ++ G++ ++A G GHS + ++
Sbjct: 1250 ELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSE 1308
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 31/203 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GQLGH + P+ + L G I+ +A G H L G L+++G
Sbjct: 1198 VYSWGSDKFGQLGHGTKAVNQSR--PKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFG 1255
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ------------LVACGHSH 112
GQLG G SF + +NIP + N + +ACG H
Sbjct: 1256 YGDFGQLGTG----SF---------HSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACS 172
+++ +G+++ WG GQ ++ P ++ G V K++ G H+ TD
Sbjct: 1303 SVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG-VTKISCGHFHTVATTD--- 1358
Query: 173 LKELCEFRLAESVTLSNASEIED 195
LK + + E + L ++S+ ++
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDE 1381
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+CG H +T G LY WG Q+GQLG G + +P D + PI
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIF------ 1180
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGG 161
+V CG HT+ + ++ WG + +GQ + K+ P ++ G+ ++ +AAG
Sbjct: 1181 -MVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGF 1239
Query: 162 GHSAVLTDACSL 173
H+ VL + L
Sbjct: 1240 AHNIVLKKSGEL 1251
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 31/178 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA---------LDGIFIKDVACGGVHTCAL 54
+++++G G GQLG S S + +P R+ DG I +ACG H+
Sbjct: 1250 ELFSFGYGDFGQLGTGSFHSKN---IPTRIEINAIMGGLQHHDGGKITQIACGFGHSVIC 1306
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI--PILV-VPNGVQLVACGHS 111
+ G +Y+WG + GQLG F NI P L+ GV ++CGH
Sbjct: 1307 SENGEVYSWGLGKQGQLG---------------HKVFENISKPRLIETLRGVTKISCGHF 1351
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
HT+ ++ WG + + + P VD+ + + V K+ G H+ +T
Sbjct: 1352 HTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTIT 1409
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 41/171 (23%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALT------- 55
++Y+WG G +LGH S DK E +P+ V + V CG HT +T
Sbjct: 1361 NVYSWGSGEHMKLGH----SSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNN 1416
Query: 56 --------------SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
S +YAWG + G+LGLG +S P F + PI
Sbjct: 1417 SNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKS----P------FFDKPIPTAIK 1466
Query: 102 GVQL-----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
GV ++CG + + + I+ WG +GQ N K+ W P+ +
Sbjct: 1467 GVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4069 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4125
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4126 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4172
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4222
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4175 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4231
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL +G +
Sbjct: 4232 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASNGDV 4279
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4280 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3965 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4018
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4019 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4063
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4064 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4117
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4019 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4076 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4125
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4126 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4169
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4100 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4157 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4203
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4253
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4206 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4263 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4310
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLSL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3996 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4049
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4050 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4107 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4156
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 47/210 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G GQLGH SLQS D+ P+ + I++V+CG H+ A++ G L+ WG
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDR---PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWG 3089
Query: 65 GCQAGQLGLGP---QTR--------------------------------------SFSFI 83
G+LG G QT+ SF +
Sbjct: 3090 QGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKL 3149
Query: 84 PNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
+ + ++P+ V+ P+ + + CG +++ ++GK++ WG Y + N+ ++
Sbjct: 3150 GLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQ 3209
Query: 142 WYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
P+ VD + + ++A G H LT +
Sbjct: 3210 PIPTLVDGLASKTITQVAVGALHCLALTSS 3239
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG GS G LG + + + + P V AL G I ++ G +H+ A+T G LY WG
Sbjct: 529 VYSWGQGSNGVLG---IGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWG 585
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVAC----GHSHTLVYMRD 119
G+LG G N D + IP +V NGV++V G +HTL
Sbjct: 586 KGSYGRLGHG----------NAED---KLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDT 632
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLT 168
G++ WG YG+ S P P+ V K+ G S LT
Sbjct: 633 GQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALT 683
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVAC--GGVHTCALTSKGAL 60
+Y G + G+LG + S D P + +L GI +K +A GG H A+T++G L
Sbjct: 3888 VYASGYAAHGRLG---IGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGEL 3944
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYM 117
YAWG + G+LGLG T N+P L+ + V CG SH+
Sbjct: 3945 YAWGEGEDGKLGLG-------------TTVNMNVPHLIESLKSKHVIDAGCGSSHSACIT 3991
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKEL 176
DG ++ WG YG+ + P V GE V +A G G + L C+
Sbjct: 3992 DDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTL---CATASG 4048
Query: 177 CEF 179
C F
Sbjct: 4049 CVF 4051
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG G K +P+++ +L G + + CG + ALT+ G +Y WG
Sbjct: 4050 VFSWGDGDYGKLGRGG-NEGSK--VPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWG 4106
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+LG G + + R + L+ V + CG H +V GK+
Sbjct: 4107 KGDYYRLGHGDDSHQRT---------PRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFS 4157
Query: 125 WGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHS 164
WG N GQ N+ + P + + C+ V A G HS
Sbjct: 4158 WGDNDEGQIGNDTTQAVSVPKRINITDNICIDHV---ACGSAHS 4198
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 26/193 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GS G+LG L+ G +P +V+ I+ + CG + LT +G +Y W
Sbjct: 3138 LWAWGDGSFGKLG---LKDGSSSTDVPVQVITFPSNIIQ-IECGMHFSVLLTKEGKVYTW 3193
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G + +LG N+S T + IP LV + VA G H L G
Sbjct: 3194 GKGEYYRLG------------NDS-TSVQPIPTLVDGLASKTITQVAVGALHCLALTSSG 3240
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEF 179
+++ WG N +GQ N + P V G + K+A G HS SL +F
Sbjct: 3241 EVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQG-SLTTAVKF 3299
Query: 180 RLAESVTLSNASE 192
++ SN+ +
Sbjct: 3300 ---SPISFSNSKD 3309
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG L + +P + +L + D CG H+ +T G+LY W
Sbjct: 3943 ELYAWGEGEDGKLG---LGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTW 3999
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG +D ++ P LV V VACG + TL
Sbjct: 4000 GKGRYGRLG-------------HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATA 4046
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + WG YG+ + + P +D G+ V KL G S LT A
Sbjct: 4047 SGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTA 4099
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G QLGH G++E + P+ + L + DV+ G H ALT+ +YA
Sbjct: 688 LYSWGCGDTYQLGH-----GNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLV 115
WG ++ SF NES + P+++ G L+ACG S T V
Sbjct: 743 WG-------------KNSSFEVNESGDIISS-PLMIEAASGKGALLIACGASETFV 784
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYAW 63
+++WG G G+LG D+ +P+ + + + + CG + ALT G LY+W
Sbjct: 635 VWSWGDGDYGKLGR---PGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G QLG G Q R I S+T + V+ G H + D
Sbjct: 692 GCGDTYQLGHGNQEHVRQPKLIEGLSETVVSD------------VSVGAQHCVALTTDSD 739
Query: 122 IHGWGYNS 129
++ WG NS
Sbjct: 740 VYAWGKNS 747
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 19/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA--LTSKGALYA 62
++ WGL + QLG ++ K + R +A + + G C+ ++ G ++A
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLAR----LHPIQFAGGSKCSFVVSDDGKVFA 2981
Query: 63 WGGCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G +G+LG+G R I + S R + V+C H L DG
Sbjct: 2982 CGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVA----------VSCAGRHVLAVTADG 3031
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLT 168
K+ WG YGQ + P ++ + +R+++ G GHSA ++
Sbjct: 3032 KVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVS 3080
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYA 62
++ G GS G+LG + +P ++ +L ++ VA C G H A+T+ G +++
Sbjct: 2979 VFACGEGSSGRLGIGGFANIR---MPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFS 3035
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGK 121
WG Q GQLG G +Y R I + ++ V+CG H+ +G+
Sbjct: 3036 WGDGQYGQLGHG-----------SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGE 3084
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV 147
+ WG + G+ + S P V
Sbjct: 3085 LFTWGQGADGRLGHGDSNNQTKPKLV 3110
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQ 104
G H ALT G +Y+WG G LG+G +T + P V + +
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-------------NTESQTAPTAVAALSGDRIV 563
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG- 162
++ G H+ DG ++ WG SYG+ + + P+ V+ G ++ ++ G G
Sbjct: 564 HISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGD 623
Query: 163 -HSAVLTDA 170
H+ L D
Sbjct: 624 AHTLALDDT 632
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+++WG GQ+G+ + Q+ +P+R+ D I I VACG H+ A +SK
Sbjct: 4155 VFSWGDNDEGQIGNDTTQAVS---VPKRINITDNICIDHVACGSAHSIAWSSK 4204
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 10/172 (5%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG GQLG G+K PR +L + + G A+T G +YA
Sbjct: 3834 FSVFGWGHNHRGQLGGIE---GNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G G+LG+G + P S R I + + + G H L G++
Sbjct: 3891 SGYAAHGRLGIGSSDNVATPTPLTS-LATRGIAVKKIA-----IHSGGKHCLAVTTQGEL 3944
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG G+ + P ++ + V G HSA +TD SL
Sbjct: 3945 YAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSL 3996
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA------------LDGIFIKDVACGGVHT 51
D+Y WG S GQLG+ + + +P ++ I +V G HT
Sbjct: 146 DLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHT 205
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS 111
A+++ G +++WG Q GQLGLG +P + + I V +A G+
Sbjct: 206 IAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRI--------VVDIASGNF 257
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLT 168
H+ + +G ++ WG N YGQ + P V + ++ ++A G H+ +LT
Sbjct: 258 HSSLLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALGNNHTILLT 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++ G VGQLG +++ +P V L + + G + A+T KG LY WG
Sbjct: 95 IFSMGFNQVGQLG---IENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKGDLYIWG 151
Query: 65 GCQAGQLGLGPQT-RSFSFIPNESDTYF-----RNIPILVVPNGVQL--VACGHSHTLVY 116
GQLG G +S FIP F ++ PI +Q V G HT+
Sbjct: 152 TSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIY---QNIQYSNVCFGAQHTIAV 208
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR---KLAAGGGHSAVLT 168
G I WG N YGQ P PV + R +A+G HS++LT
Sbjct: 209 STTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDIASGNFHSSLLT 263
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
I++WG GQLG HC+ + +P R + D+A G H+ LT +G +Y
Sbjct: 214 IFSWGSNQYGQLGLGHCNTKLVP---VPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYL 270
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG Q GQLG G DT N+P V + + +A G++HT++ +
Sbjct: 271 WGSNQYGQLGQG-------------DTIDLNVPKKVKGSIEFKKINRMALGNNHTILLTK 317
Query: 119 DGKIHGWGYNSYGQ 132
D ++ +G N + Q
Sbjct: 318 DQDVYTFGNNEFYQ 331
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 27/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G H + DK+ P L + + ++ G H+ A+ + L WG
Sbjct: 4 LYSWGKGKTGNTCH----NIDKKY-PSPPSVLISLNLDQLSIGPNHSAAIVNNECL-MWG 57
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ + T F+ +V V V+CG +HTL+ + KI
Sbjct: 58 ----------------EVMGRKHTTLFK----IVWKRRVVSVSCGFNHTLLLTSEYKIFS 97
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G+N GQ E + P PVD V K+ AG SA +TD L
Sbjct: 98 MGFNQVGQLGIENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKGDL 147
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 36/186 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDG--IFIKDVACGGVHTCALTSKGAL 60
+Y+WG GS+GQLGH GD +++ P+++ + + + ++CGG H+ A+T G L
Sbjct: 70 VYSWGWGSMGQLGH-----GDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTL 124
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG-----VQLVACGHSHTL 114
Y WG GQLGL P E + ++P+ +P G + V+CG +HT
Sbjct: 125 YVWGESHWGQLGL----------PKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTA 174
Query: 115 VYMRDGKIHGWGYNSYGQ----------AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 163
G+++ WG GQ NE A P + GE V ++A G H
Sbjct: 175 ALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFH 234
Query: 164 SAVLTD 169
SA +T+
Sbjct: 235 SAAVTE 240
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G LG QS D+++ P+R+ D I + V+CGG HT + G YA+G
Sbjct: 244 VYVWGKEDYGMLG--VGQSSDQQI-PKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFG 300
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ G+LGLG DT R P LV V ACG SHTL DG
Sbjct: 301 RGEYGRLGLG-------------DTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGT 347
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ G +G+ P+ +D VR+ +AGG HS L
Sbjct: 348 AYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVRQFSAGGAHSVAL 393
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI---FIKDVACGGVHTCALTSKGALY 61
+Y WG GQLG E LP + +G I V+CGG HT ALTS G +Y
Sbjct: 124 LYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
WG +GQLG+G + NES +L NG ++ VACG H+
Sbjct: 184 VWGRGDSGQLGIG--SVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQ 241
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G ++ WG YG +S+ P +++ V +++ GG H+ V+ +
Sbjct: 242 GHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKS 293
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
P+++ L I V+CG HT ALTS GA+Y+WG GQLG G I
Sbjct: 39 FPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHG----DLKIINEPQK 94
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS-PV 147
F L V ++CG H+ +DG ++ WG + +GQ K A + S PV
Sbjct: 95 IAFFEQERLE----VDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPV 150
Query: 148 DWCVGE------VRKLAAGGGHSAVLT 168
+ E + K++ GG H+A LT
Sbjct: 151 KCPMPEGEAGETIVKVSCGGTHTAALT 177
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P++V AL G + VACG T ALT GA
Sbjct: 3186 ELYTWGLGEYGRLGH-----GDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGA 3240
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGSAT--PHEIE-RLSGI-------GVIQIECGAQFSLALTRA 3290
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3291 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3342
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3191
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + L +Q VACG + TL DG +
Sbjct: 3192 LGEYGRLGHG---------DNATQLKPKQVTALAGRRVIQ-VACGSRDAQTLALTEDGAV 3241
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3242 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRA 3290
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+TS G + W
Sbjct: 4253 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITSSGHVLTW 4309
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4310 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4359
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4360 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4409
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D + +P V+AL I DVA G H+ LTS+G +Y
Sbjct: 686 NLYTWGRGTYGRLGHGN---SDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVY 742
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ + G ++ +
Sbjct: 743 AWGDGDYGKLGNGNCNSSLQ-------------PILVETLPR-VQRIFAGAQSSMALTTE 788
Query: 120 GKIHGWGYNS-YGQAANEKST 139
G ++ WG S G E+S
Sbjct: 789 GHLYSWGKASCLGHQQVERSV 809
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ Y+WG G +LGH GD +P ++ ALD +K V CG ++ A+T G LY
Sbjct: 635 NAYSWGAGEDHRLGH-----GDTHARAVPTKISALDRC-VKAVFCGCSYSAAITWSGNLY 688
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 119
WG G+LG G N D I + + + VA G +H+L +
Sbjct: 689 TWGRGTYGRLGHG----------NSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G ++ WG YG+ N + P V+ + V+++ AG S LT
Sbjct: 739 GLVYAWGDGDYGKLGNGNCNSSLQPILVE-TLPRVQRIFAGAQSSMALT 786
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4359 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4415
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4416 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4463
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4464 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4217 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM----- 4271
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4272 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSE 4323
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4324 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3292 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3347
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3348 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3391
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++ G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3081 VFACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ VACG SH+
Sbjct: 3138 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3184
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G+++ WG YG+ + + P V G V ++A G + L
Sbjct: 3185 GELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTL 3233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + P + L GI + + CG + ALT G ++ WG
Sbjct: 3241 VFSWGDGDFGKLGRGG---SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3297
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3298 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3345
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3346 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3388
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYAWGGCQAGQL 71
G+L +C L G EL P+ + L I +A C G H A+ S Y+WG + +L
Sbjct: 590 GKLYNCRL--GKPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRL 647
Query: 72 GLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNS 129
G G DT+ R +P I + V+ V CG S++ G ++ WG +
Sbjct: 648 GHG-------------DTHARAVPTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGT 694
Query: 130 YGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLT 168
YG+ + S P+ V ++ + +V L +G HS LT
Sbjct: 695 YGRLGHGNSDDQCVPAIVMALAEYEIIDV-ALGSGDAHSLCLT 736
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y+WG S LGH ++ + +PR V +L + DVA G H ALTS G ++ W
Sbjct: 791 LYSWGKASC--LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGW 848
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPN-GVQLVACGHSHTLVYMRDGK 121
G + Q+ S S P +PILV +P +AC S +L++ + +
Sbjct: 849 GRNDSQQIC----PSSVSCEP------LLRLPILVGLPTLPASGIACTASQSLIWTQSSQ 898
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4100 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4157 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4203
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4253
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4206 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4263 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4310
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLSL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3996 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4049
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4050 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4107 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4156
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4101 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4158 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4204
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4254
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4207 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL +G +
Sbjct: 4264 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLALASNGDV 4311
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3997 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4050
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4051 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4095
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4096 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4051 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4108 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4157
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4201
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4100 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4157 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4203
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4253
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4206 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4263 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4310
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLSL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3996 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4049
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4050 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4107 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4156
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|194206275|ref|XP_001917412.1| PREDICTED: RCC1 domain-containing protein 1 [Equus caballus]
Length = 197
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 32/157 (20%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
GQLGH +L++ EL PR + AL G+ + +VA GG H+ +++ G +Y WG ++GQL L
Sbjct: 9 GQLGHGTLEA---ELEPRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLAL 65
Query: 74 ----------------------GPQTRSFSFIPNESDTYF---RNIPILV-VPNGVQLV- 106
GP +S + + + T F + P L+ +P G + V
Sbjct: 66 PTRSLAEDGKTVAGEAAGLHEGGPDVKSTAGGEDGAPTPFIAVQPFPALLDLPRGSEAVK 125
Query: 107 -ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
+CG HT V R G+++ WG+ YGQ + K T +W
Sbjct: 126 ASCGSRHTAVVTRTGELYTWGWGKYGQLGH-KDTSSW 161
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4111 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4167
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4168 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4214
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4264
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4217 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4274 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4321
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4322 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLSL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4007 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4060
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4061 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4105
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4106 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4061 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4118 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4167
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4168 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4211
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG +GQLG L D E P + LD ++ +ACGG HT LT+ G ++ +
Sbjct: 222 NVYSWGRNDLGQLG---LGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 278
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV N V +ACG HTL Y+ D
Sbjct: 279 GAGKYGQLG-----------HNSTQNELR--PRLVTELAGNRVTQIACGRRHTLAYVSDL 325
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----------LAAGGGHSAVL 167
GK+ +G GQ N + P P+ E K + AGG S +L
Sbjct: 326 GKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLL 384
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN-ESDTYFRNIPILVV 99
I +ACG H+ AL+ G L+AWG GQLG+G R F+ IP ++ + +P++
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVG---RLFASIPTPQAVEHLSGVPLVQ- 206
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
++ G +H++ G ++ WG N GQ + +PS ++ +V LA
Sbjct: 207 ------ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 260
Query: 159 AGGGHSAVLT 168
GG H+A+LT
Sbjct: 261 CGGSHTALLT 270
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 169 ELFAWGQNLHGQLGVGRLFASIPT--PQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSW 226
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG T + P L+ V+ +ACG SHT + DG
Sbjct: 227 GRNDLGQLGLG-------------HTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDG 273
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G YGQ + + P V G V ++A G H+
Sbjct: 274 LVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 318
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG S Q LP V+ L IK ++ GG ++ A+ + G ++AWG
Sbjct: 84 VLAWGQNNSGQLGDGSTQ---NRTLPVNVLGL--PSIKAISAGGSYSLAVGADGKVWAWG 138
Query: 65 GCQAGQLGLG--PQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGK 121
+GQLG G +S S + F+ P+ +V+P G V+ G +H+L +DGK
Sbjct: 139 ANNSGQLGTGYLGNGKSGSEYAD-----FQVTPVSIVIPGGAAAVSGGLNHSLALAKDGK 193
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WG N+YGQ + + P V+ G + +AAG HS +
Sbjct: 194 LWAWGANTYGQLGDGTTANRLAPVSVNIPGGAI-AIAAGWYHSLAI 238
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSG-------DKELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
++ WG + GQLG L +G D ++ P +V G V+ G H+ AL
Sbjct: 134 VWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAA--VSGGLNHSLALAKD 191
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVY 116
G L+AWG GQLG G T R P+ V +P G +A G H+L
Sbjct: 192 GKLWAWGANTYGQLGDGT-------------TANRLAPVSVNIPGGAIAIAAGWYHSLAI 238
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
RDG++ WG N+ GQ N + P V + G +A GG HS V+
Sbjct: 239 ARDGRVWAWGRNNSGQVGNGGTANQLTPVVVAF-PGSAIAVAGGGSHSLVV 288
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ+G+ G L VVA G I VA GG H+ + S G +++WG
Sbjct: 244 VWAWGRNNSGQVGN----GGTANQLTPVVVAFPGSAIA-VAGGGSHSLVVLSNGTVWSWG 298
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
AGQLG G S PI V GV VA G +L DG +
Sbjct: 299 ANNAGQLGDGSNATRVS-------------PIQVPGIGVATKVAAGGYFSLAITSDG-VW 344
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG--HSAVLTDACSL 173
WG N+ GQ N + P + LA GG HS +L C +
Sbjct: 345 SWGQNTRGQLGNGSLANSSVPVFI---TATSNALALSGGYHHSLILRPGCPI 393
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG S + + P +V + G+ K VA GG + A+TS G +++WG
Sbjct: 294 VWSWGANNAGQLGDGSNAT---RVSPIQVPGI-GVATK-VAAGGYFSLAITSDG-VWSWG 347
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG-KIH 123
GQLG G S ++P+ + L G H + +R G I
Sbjct: 348 QNTRGQLGNGSLANS-------------SVPVFITATSNALALSGGYHHSLILRPGCPIW 394
Query: 124 GWGYNSYGQ 132
WG+N+YGQ
Sbjct: 395 AWGFNAYGQ 403
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPN 101
V+ G H+ L S GA+ AWG +GQLG G T R +P+ V +P+
Sbjct: 68 VSAGSYHSLLLRSTGAVLAWGQNNSGQLGDG-------------STQNRTLPVNVLGLPS 114
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
++ ++ G S++L DGK+ WG N+ GQ
Sbjct: 115 -IKAISAGGSYSLAVGADGKVWAWGANNSGQ 144
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4100 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4157 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4203
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4253
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4206 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4263 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4310
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLSL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3996 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4049
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4050 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4094
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4095 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4050 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4107 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4156
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I TWG G+ GQLGH S ++ LLP V + I V CG HT AL++ G +++WG
Sbjct: 911 ILTWGRGNRGQLGHSSFENC---LLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWG 967
Query: 65 GCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
+ GQLGLG Q+++ N + YF V + GHSH+ V +G
Sbjct: 968 FGEDGQLGLGDYQSQNSPQFINSLEGYF-----------VTQINAGHSHSSVITSEGIFM 1016
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-------------KLAAGGGHSAVLT 168
+G N + N+ + + P C+ E+ K + G HSAV+T
Sbjct: 1017 MFGCNIDHRLMNKTNQNQFLP-----CITELEFLRQEYGSDYNAVKASLGVNHSAVIT 1069
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG G G+LG G+K +++ I V+ G H+ ++++G + WG
Sbjct: 862 IYIWGNGKDGRLG----IEGEKPFKFPQIIP--NIQACQVSLGYHHSACISNQGQILTWG 915
Query: 65 GCQAGQLGLGPQTRSFS--FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG SF +P + +F + I+ V CG HTL DG++
Sbjct: 916 RGNRGQLG----HSSFENCLLPTPVN-FFSKMSIVS-------VGCGWQHTLALSNDGRV 963
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG+ GQ P ++ G V ++ AG HS+V+T
Sbjct: 964 FSWGFGEDGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVIT 1010
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y++G GS +LGH +Q+ P+ + +L I V+ G H A+T+ G +Y WG
Sbjct: 1160 VYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWG 1219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
QLGLG + + + T + L V+ +CG+ HT V
Sbjct: 1220 FNFYDQLGLGDSEKDY-----QQPTKVTKLSGL----NVKQSSCGYFHTSV 1261
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
V+CG T + + +Y++G +LG L QT + P ++ +N I V G
Sbjct: 1144 VSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIES-LKNFKITSVSTG 1202
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAG 160
+ H + DGK++ WG+N Y Q S + P+ V G V++ + G
Sbjct: 1203 CR-------HAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCG 1255
Query: 161 GGHSAVL 167
H++VL
Sbjct: 1256 YFHTSVL 1262
>gi|383320311|ref|YP_005381152.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379321681|gb|AFD00634.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 15 QLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
Q G + S DK +L P RV LD + KDV GG T AL + G ++AWG GQLG
Sbjct: 213 QTGCLGVNSTDKFVLSPARVGGLDNV--KDVDAGGTFTIALKNDGTVWAWGDGSQGQLGK 270
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
G + D +++ PI V+ + + ++ G H + DG I WGYN G+
Sbjct: 271 GFKMNG------PLDDPYQSTPIQVIGLSDIVDISAGDRHAMALKDDGTIWTWGYNMMGE 324
Query: 133 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+ S + PSPV + +V ++AGG HS L S+
Sbjct: 325 LG-DGSYWNTKPSPVKVNLEDVIAISAGGMHSLALKKDGSV 364
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG S GQL + + K LL R L+ +K V+ G H AL G ++AWG
Sbjct: 48 IWEWGNNSSGQLAESTDDT--KYLLIHR---LNMTGVKSVSAGMYHNLALKDDGTVWAWG 102
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G + R+ P+ V + V + G + DG + G
Sbjct: 103 YNRNGQLGDGTKIT-------------RSTPVQVNISNVTAIFAGGLDSFALKDDGTLWG 149
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N YGQ + T SPV + V+ +++ GG + L D
Sbjct: 150 WGANFYGQLGD--GTNITRLSPVRIPIDNVKVVSSKGGSTIALKD 192
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD----KELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++ WG GS GQLG +G + P +V+ L I D++ G H AL G +
Sbjct: 257 VWAWGDGSQGQLGKGFKMNGPLDDPYQSTPIQVIGLSDIV--DISAGDRHAMALKDDGTI 314
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG G+LG G + + P+ V V ++ G H+L +DG
Sbjct: 315 WTWGYNMMGELGDGSYWNT------------KPSPVKVNLEDVIAISAGGMHSLALKKDG 362
Query: 121 KIHGWGYNSYGQAAN 135
+ WG N YG+ +
Sbjct: 363 SVWAWGGNYYGEVGD 377
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+++++ G H L G ++ WG +GQL + DT + I L +
Sbjct: 29 VEEISAGEFHNIVLCDDGTIWEWGNNSSGQLA-----------ESTDDTKYLLIHRLNM- 76
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
GV+ V+ G H L DG + WGYN GQ + T +PV + V + AG
Sbjct: 77 TGVKSVSAGMYHNLALKDDGTVWAWGYNRNGQLGD--GTKITRSTPVQVNISNVTAIFAG 134
Query: 161 GGHSAVLTDACSL 173
G S L D +L
Sbjct: 135 GLDSFALKDDGTL 147
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+TWG +G+LG S + + P +V D I I + GG+H+ AL G+++AWG
Sbjct: 314 IWTWGYNMMGELGDGSYW--NTKPSPVKVNLEDVIAI---SAGGMHSLALKKDGSVWAWG 368
Query: 65 GCQAGQLGLG 74
G G++G G
Sbjct: 369 GNYYGEVGDG 378
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + ++ V ++ + + GG+ + AL G L+ WG
Sbjct: 98 VWAWGYNRNGQLGDGT------KITRSTPVQVNISNVTAIFAGGLDSFALKDDGTLWGWG 151
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G S P+ + + V++V+ T+ DG +
Sbjct: 152 ANFYGQLGDGTNITRLS-------------PVRIPIDNVKVVSSKGGSTIALKDDGTVWA 198
Query: 125 WGYNSYGQ 132
WG N + +
Sbjct: 199 WGCNIFAE 206
>gi|326427987|gb|EGD73557.1| hypothetical protein PTSG_05264 [Salpingoeca sp. ATCC 50818]
Length = 441
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H D++ WG G GQLGH S+ E PR V AL G+ + +A GG H+ L+S G +Y
Sbjct: 264 HGDVWAWGRGGFGQLGHGSIHD---EPTPRPVEALQGMCMSMIAAGGWHSLVLSSSGDVY 320
Query: 62 AWGGCQAGQLG-----LGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTL 114
++G QLG P + SD+ N + +G V VACG +H+
Sbjct: 321 SFGWNNHHQLGRDTTDTPPAVPGLIELEESSDSTADNEQTHSLRHGEDVVSVACGSAHSY 380
Query: 115 VYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPS 145
G++ GWG+ +GQ N K ++ P+
Sbjct: 381 AVTSVGQVFGWGWAEHGQFGPNTKESHVIKPT 412
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
IK +ACG H+ L + G ++AWG GQLG G + P E+
Sbjct: 248 IKQLACGKTHSMVLDTHGDVWAWGRGGFGQLGHGSIHDEPTPRPVEALQGM--------- 298
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ ++A G H+LV G ++ +G+N++ Q
Sbjct: 299 -CMSMIAAGGWHSLVLSSSGDVYSFGWNNHHQ 329
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 161
++ +ACG +H++V G + WG +GQ + P PV+ G + +AAGG
Sbjct: 248 IKQLACGKTHSMVLDTHGDVWAWGRGGFGQLGHGSIHDEPTPRPVEALQGMCMSMIAAGG 307
Query: 162 GHSAVLTDA 170
HS VL+ +
Sbjct: 308 WHSLVLSSS 316
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2357 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2413
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2414 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2463
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2464 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2512
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2408 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2522
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2523 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2582
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2583 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2614
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3404
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 3405 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3451
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 3452 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3504
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3455 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3511
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3512 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3553
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3554 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3602
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3507 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3564 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 3605
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3374
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3375 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3426
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3427 EALQGHRVVDIACGSGDAQTL 3447
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2246 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2302
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2303 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 2355
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 2356 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2409
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 3558 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 3605
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 3606 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 3633
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3243 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3298
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3299 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3351
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3352 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3401
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G++ P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNQ---PEQIGALADQHIIHVACGESHSLALSDQGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALATDGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+K+VACGG H L G +Y G GQLG + I +D + +
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQPEQIGALADQHIIH------- 88
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
VACG SH+L G++ WG S GQ
Sbjct: 89 -----VACGESHSLALSDQGQLFSWGAGSDGQ 115
>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 491
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L + WGL G C D EL P V +L GI I+ VA G HT ++S G +Y+
Sbjct: 335 LLTFGWGL-----YGQCGQGCTDDELSPTCVSSLLGIRIESVAAGLWHTVCISSDGDIYS 389
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGK 121
+GG Q GQLG G ++++T R + V N ++V+CG H+ + DGK
Sbjct: 390 FGGNQFGQLGTG---------ADQAETLPRLLDAPSVENVNAKVVSCGARHSAIVSEDGK 440
Query: 122 IHGWGYNSYGQ 132
+ WG+N YGQ
Sbjct: 441 VFCWGWNKYGQ 451
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
DIY++G GQLG + Q+ E LPR + A ++ + K V+CG H+ ++ G ++
Sbjct: 386 DIYSFGGNQFGQLGTGADQA---ETLPRLLDAPSVENVNAKVVSCGARHSAIVSEDGKVF 442
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLV 115
WG + GQLGLG D RNIP+ V + VACG HTL+
Sbjct: 443 CWGWNKYGQLGLG-------------DVIDRNIPVEVPMENCNSKNVACGWWHTLL 485
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR---------- 78
+P V G+ I V+ GG HT AL+ G ++ WG GQLGLG + R
Sbjct: 224 VPCLVTLNPGVRITSVSAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 283
Query: 79 --SFSFIPNESDTYFRNIPIL-----VVPNG-VQLVACGHSHTLVYMRDGKIHGWGYNSY 130
S SF + S R L +P V+ +ACG H+ G + +G+ Y
Sbjct: 284 IESSSFGKDRSAALARGSASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLY 343
Query: 131 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
GQ + P+ V +G + +AAG H+ ++
Sbjct: 344 GQCGQGCTDDELSPTCVSSLLGIRIESVAAGLWHTVCIS 382
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHNLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL T +P R I L +Q V+CG+ H+L DG+
Sbjct: 109 GAGSDGQLGLM-TTEDAVAVP-------RVIQKLNQQTILQ-VSCGNWHSLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHNLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3008 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3065 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3114
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3115 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 3163
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3059 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3173
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3174 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3233
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3234 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3265
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH S D+ PR + +L G+ + DVA GG H+ +T+ G LY W
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDR---PRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTW 4055
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4056 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4102
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4103 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4155
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4106 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4163 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4204
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4205 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4253
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4158 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4215 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4256
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRS------PCDR 4021
Query: 88 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++ VA G +H+ G ++ WG YG+ + S P
Sbjct: 4022 PRVIESL------RGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4075
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4076 LVEALQGHRVVDIACGSGDAQTL 4098
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 557 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 613
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 614 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 661
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 662 HSWGSNDQCQ 671
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2897 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2953
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2954 YACGEATNGRLGLGISSGTVP-IPRQITALSSYMVKKVA------VHSGGRHATALTVDG 3006
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3007 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3060
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 33/142 (23%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 446 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 500
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-----LVACG--H 110
G LY WG +L G NE IL++ +G+ +CG
Sbjct: 501 GELYTWGRGNYXRLDHGRSAM------NE---------ILIMISGLDRQKFIYKSCGIRF 545
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+ TL + +G++ WG YG+
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGK 567
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG--GVHTCALTSKGALY 61
++YTWG G+ +L H +S E+L + LD +CG T A G ++
Sbjct: 502 ELYTWGRGNYXRLDHG--RSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVW 558
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 559 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 606
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 607 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 657
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3894 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3949
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S S T +I + + V G H L +G+++
Sbjct: 3950 GYGAGGRLGIGGTESVS-----SPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4002
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDL 4052
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA-----LTSKG 58
++YTWG GQLG + + + PR V AL G + VACG HT A TS G
Sbjct: 4209 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAG 4265
Query: 59 ALYA 62
L A
Sbjct: 4266 KLPA 4269
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3071 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALRAKRIRDIACGSSHSAALTSSGELYTWG 3127
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3128 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3177
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3178 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3226
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLE------------VVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTE 727
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3122 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3236
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3237 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3296
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3297 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3328
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH S D+ PR V +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDR---PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGH--SHTLVYMR 118
G + G+LG SD+ + P LV V G ++ VACG + TL
Sbjct: 4120 GKGRYGRLG-------------HSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTD 4166
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4167 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKS 4219
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4170 VWSWGDGDYGKLGRGG---SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWG 4226
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4227 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4268
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4269 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4317
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 30/177 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
TL +G++ WG YG+ S P ++ EV K+ G S LT
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALT 674
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4222 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4279 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4320
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G +Y+WG + G+LG G +RS P
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--SRSPCDRPRVV 4089
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4090 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4141
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4142 EVLQGHRVVDVACGSGDAQTL 4162
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L +G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K +P L + + VA G A+T +G +YA G
Sbjct: 2964 VFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3020
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG + + IP + + V V G H DGK+
Sbjct: 3021 EATNGRLGLGLSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDGKVFS 3073
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
WG G+ + P ++ + +R +A G HSA LT + L
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGEL 3123
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4320
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4321 STSKPSSAGKLP-----AQVPMEYN-HLQEIPII 4348
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3958 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4013
Query: 65 GCQAGQLGLGPQTRSFS---FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G AG T S S + + + R + V G H L +G+
Sbjct: 4014 GYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVA----------VNSGGKHCLALSSEGE 4063
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG G+ + + P V+ G EV +AAGG HSA +T A L
Sbjct: 4064 VYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDL 4116
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +++WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4105 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4162 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4208
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4258
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4211 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4268 --QDRLIGL-PEGRA------RNHNRPQQIPLLA---GVIIEDVAVGAEHTLALASNGDV 4315
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4316 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4001 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4054
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4055 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4099
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4100 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4055 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4112 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4161
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4162 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4205
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2293 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2349
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2350 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2399
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2400 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2448
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2344 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2458
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2459 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2518
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2519 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2550
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3342
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 3343 GKGRYGRLG-------------HSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTD 3389
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 3390 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3442
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3255 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3312
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3313 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3364
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
D G V +A G G + L
Sbjct: 3365 DALQGHRVVDVACGSGDAQTL 3385
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3393 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3449
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3450 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3491
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG + WG N GQ + + P V G +V ++A G H+
Sbjct: 3492 TEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3539
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2182 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2238
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2239 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 2291
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 2292 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2345
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G+ Y WG
Sbjct: 3445 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWG 3500
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3501 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 3542
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3181 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 3236
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3237 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3289
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3290 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3339
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 3497 YTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWST 3544
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 3545 SKPASAGKLP-----AQVPMEYN-HLQEIPII 3570
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G QLG S + D E P+ V L F+ V CGG+HT A TS G + +W
Sbjct: 253 ELFTWGQGRFNQLGQTS-KYVDHETAPKSVDTLR--FVHQVTCGGLHTLASTSAGVV-SW 308
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q G+LG G + + S IP PI + G ++ G H+ DGK+
Sbjct: 309 GANQHGELGHGSNSDAKSAIPK---------PIKLSSRGWSKLSAGWKHSAGVSNDGKLF 359
Query: 124 GWGY-NSYGQAANEKSTYA-----------WYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG+ S G ++EK + W P+ V W G+ ++ G H+ L
Sbjct: 360 AWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEV-WLPGDAVGVSCGFNHTLAL 414
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 5 IYTWGLGSVGQLGHCS--------LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
+Y+WG + G LGH S ++ PR + AL ++ +A G +H+ +
Sbjct: 191 VYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDE 250
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+G L+ WG + QLG + P DT V V CG HTL
Sbjct: 251 RGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTL----------RFVHQVTCGGLHTLAS 300
Query: 117 MRDGKIHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
G + WG N +G+ +N + A P P+ KL+AG HSA +++ L
Sbjct: 301 TSAGVV-SWGANQHGELGHGSNSDAKSA-IPKPIKLSSRGWSKLSAGWKHSAGVSNDGKL 358
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ GL + GQLGH + E +V LD + + VA G HT + G ++A+G
Sbjct: 87 VFACGLNNYGQLGHGKHSAHVPEAA---LVDLD-VEVVRVAAGNNHTLCVDVDGGVWAFG 142
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G F P R I L + + VA G H+L D +++
Sbjct: 143 KNEGGQLGTGLDLDGFQ--P-------RRIETLALEGKIVDVASGAEHSLALSEDARVYS 193
Query: 125 WGYNSYGQAANEKSTY--AWYPSPVDWCVG----------EVRKLAAGGGHSAVLTDACS 172
WG ++ G + T+ W+ +VR +AAG HSA + +
Sbjct: 194 WGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGE 253
Query: 173 LKELCEFRLAE 183
L + R +
Sbjct: 254 LFTWGQGRFNQ 264
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALYA 62
++ +G GQLG G PRR+ +AL+G + DVA G H+ AL+ +Y+
Sbjct: 138 VWAFGKNEGGQLGTGLDLDG---FQPRRIETLALEGKIV-DVASGAEHSLALSEDARVYS 193
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG G LG G +T + + + T + + + V+ +A GH H+ G+
Sbjct: 194 WGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGE 253
Query: 122 IHGWG---YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+ WG +N GQ + + + P VD + V ++ GG H+ T A
Sbjct: 254 LFTWGQGRFNQLGQTS-KYVDHETAPKSVD-TLRFVHQVTCGGLHTLASTSA 303
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRR-----VVALDGIFIKDVACGGVHTCALTSKGALYAW 63
G G G+LGH + + D V L+ + + A GG H+ L G ++A
Sbjct: 31 GNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGGFVFAC 90
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + + +P + ++ + VV VA G++HTL DG +
Sbjct: 91 GLNNYGQLGHGKHS---AHVP---EAALVDLDVEVVR-----VAAGNNHTLCVDVDGGVW 139
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTD 169
+G N GQ + P ++ G++ +A+G HS L++
Sbjct: 140 AFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSE 187
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 26/128 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G+LGH S S K +P+ + L ++ G H+ +++ G L+AWG
Sbjct: 305 VVSWGANQHGELGHGS-NSDAKSAIPKPI-KLSSRGWSKLSAGWKHSAGVSNDGKLFAWG 362
Query: 65 G------------CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
GQLGLG N+ D Y+ + + P V+CG +H
Sbjct: 363 FGGSVGSHSDEKLSSGGQLGLG----------NDFD-YWEPTEVWL-PGDAVGVSCGFNH 410
Query: 113 TLVYMRDG 120
TL +R G
Sbjct: 411 TLALVRLG 418
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S G+LG S + P RV L + VA G H+ AL + G + AWG
Sbjct: 383 WAWGHNSHGELGDGSTR---NSPAPVRVDGLKEVVA--VAAGSSHSLALLADGTVLAWGD 437
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G TR+ +P + R + GV VA G SH+L + DG + W
Sbjct: 438 NTFGQLGDG--TRASHSVPAQ----VRGL------RGVVAVAAGSSHSLALLADGTVWTW 485
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD--ACSLKELCEFRLA 182
GYN GQ + +TY + P V G V +AAGG HS AV +D A + E + +L
Sbjct: 486 GYNLNGQLGDGTTTYRYEPVAVKGLEGVV-AVAAGGNHSLAVRSDGTAWAWGENVKGQLG 544
Query: 183 ESVTLSNASEIE 194
+ S + +E
Sbjct: 545 DGTLTSRPAPVE 556
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 19/134 (14%)
Query: 1 MHLDIYTWGLG--SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D W +G SVGQLG + +P RV+ L G+ VA GG H+ A+ S G
Sbjct: 25 VHQDGTVWAVGGNSVGQLGDGTTS---LRRVPVRVLGLSGVVT--VAAGGGHSLAVHSDG 79
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++AWG +GQLG G SF R + +GV VA G H+L
Sbjct: 80 TVWAWGNNSSGQLGDG------SFDNRAEPVRVRGL------SGVVAVAAGGYHSLAVSA 127
Query: 119 DGKIHGWGYNSYGQ 132
DG + WG NS GQ
Sbjct: 128 DGTVWAWGNNSSGQ 141
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 85/211 (40%), Gaps = 49/211 (23%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D ++ WG S GQLG S D P RV L G+ VA GG H+ A+++ G
Sbjct: 75 VHSDGTVWAWGNNSSGQLGDGSF---DNRAEPVRVRGLSGVVA--VAAGGYHSLAVSADG 129
Query: 59 ALYAWGGCQAGQLGLGP---------------------------QTRSFSFIPNESDTYF 91
++AWG +GQLG G RS + D +
Sbjct: 130 TVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLY 189
Query: 92 ------------RNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+ +L V GV V+ G +H+L DG + WG NS+GQ ++T
Sbjct: 190 GQLGNRGEFNSSEPVQVLRVTGGVT-VSAGANHSLAVSADGTVWAWGDNSHGQLGIARTT 248
Query: 140 -YAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
P V G V +AAG HS + D
Sbjct: 249 PLLSIPGRVPEVRGSV-AMAAGDNHSLAVRD 278
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG 102
+A GG H+ ++ G ++A GG GQLG + T R +P+ V+ +G
Sbjct: 15 IATGGSHSLSVHQDGTVWAVGGNSVGQLG-------------DGTTSLRRVPVRVLGLSG 61
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 162
V VA G H+L DG + WG NS GQ + P V G V +AAGG
Sbjct: 62 VVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVV-AVAAGGY 120
Query: 163 HSAVLT 168
HS ++
Sbjct: 121 HSLAVS 126
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + P V L+G+ VA GG H+ A+ S G +AWG
Sbjct: 482 VWTWGYNLNGQLGDGTTT---YRYEPVAVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWG 536
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T R P+ V + VA +L DG
Sbjct: 537 ENVKGQLGDGTLTS-------------RPAPVEVKAA-AKAVAAAQGLSLAVGSDGFPWA 582
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ + +T P V GEV +AAG GHS L+
Sbjct: 583 WGNNSSGQLGDGSTTSRPMPMRVQ-GAGEVVAVAAGNGHSLALS 625
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + + P +V+ + G V+ G H+ A+++ G ++AWG
Sbjct: 181 LWAWGDNLYGQLGNRGEFNSSE---PVQVLRVTGGVT--VSAGANHSLAVSADGTVWAWG 235
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV------ACGHSHTLVYMR 118
GQLG+ R P+L +P V V A G +H+L
Sbjct: 236 DNSHGQLGI-----------------ARTTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRD 278
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
DG + WG N +GQ N P V G V +AAG HS + D
Sbjct: 279 DGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEG-VGAVAAGSNHSLAVRD 328
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 29/142 (20%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQLG S S +P RV + VA G H+ AL+ +G ++AWG
Sbjct: 581 WAWGNNSSGQLGDGSTTS---RPMPMRVQGAGEVVA--VAAGNGHSLALSPEGGVWAWGQ 635
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS------HTLVYMRD 119
GQLG G R + P VQ ++ + +L D
Sbjct: 636 NARGQLGEGTLDRRLA------------------PTRVQGLSGVVAVAAGGAFSLAVRDD 677
Query: 120 GKIHGWGYNSYGQAANEKSTYA 141
G + WG N++GQ N YA
Sbjct: 678 GSVWSWGDNAFGQLGNAPPVYA 699
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + + P RV L+G+ VA G H+ A+ G ++AWG
Sbjct: 282 VWAWGSNGHGQLGNGFMVDNSE---PGRVPGLEGV--GAVAAGSNHSLAVRDDGTVWAWG 336
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ G G T P VA H+L DG
Sbjct: 337 SNVEGQRGDG--TTGQLSAPTRVPGVSGV----------VGVAANVFHSLAVSADGSAWA 384
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACSL 173
WG+NS+G+ + + + P VD + EV +AAG HS A+L D L
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVD-GLKEVVAVAAGSSHSLALLADGTVL 433
>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 230
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG Q G L + +P++++A +GI IK VA G H+ A+T G LY W
Sbjct: 85 DVYSWGCWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGW 144
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGK 121
G + G LGLG DT R IP V +G + +V+CG HT+ G
Sbjct: 145 GWGRYGNLGLG-------------DTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGG 191
Query: 122 IHGWGYNSYGQ 132
++ G++ YGQ
Sbjct: 192 LYTHGWSKYGQ 202
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAWGG 65
+WG G GQLGH D LLP ++ A DG I V CG +T A + G +Y+WG
Sbjct: 35 SWGRGEDGQLGHGDT---DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG- 90
Query: 66 C----QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
C Q G+LGLG T S +P + F I I ++VA G H++ DG
Sbjct: 91 CWGRNQNGELGLG--TTKDSHVPQKI-LAFEGIRI-------KMVAAGAEHSVAITEDGD 140
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
++GWG+ YG + P V+ ++ ++ G H+ ++ + L
Sbjct: 141 LYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 192
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G LG L + L+P +V +DG I V+CG HT +++S G LY
Sbjct: 140 DLYGWGWGRYGNLG---LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 195
Query: 64 GGCQAGQLGLG 74
G + GQLG G
Sbjct: 196 GWSKYGQLGHG 206
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4087
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4088 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4140 EALQGHRVIDIACGSGDAQTL 4160
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4319 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4095 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4151
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4152 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4198
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4201 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4258 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4307
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4308 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3991 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4044
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4045 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4089
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4090 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4045 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4102 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4151
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4152 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4195
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG S GQLG+ ++GD +P RV + K ++ G + AL G +YAWG
Sbjct: 138 VYSWGDNSYGQLGNN--RTGDSRTVPDRVQGMP--KAKQISAGCDFSLALLENGKVYAWG 193
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G R+ S +P R + L + + G H L D +
Sbjct: 194 RGIHGQLGTG--NRATSSVP-------RQVTGL---EDIVKIDAGCYHALAITADNTVKS 241
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WGYN YGQ N + + P VDW +V + AG H+ +T
Sbjct: 242 WGYNLYGQLGNSATKSSTVPVDVDWLT-DVSDIEAGAWHNYAMT 284
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH-----TCALTSKGA 59
+ +WG G GQLG+ +L L P V +L + ++ GG T A T K
Sbjct: 32 VLSWGAGRTGQLGNGTLS---DSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDK-T 87
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ AWG AGQLG G T +P +P L V+ +A G H L
Sbjct: 88 VKAWGHNSAGQLGNGGNTN--QAVPTT-------VPRLT---NVKDIAAGGKHALALDTS 135
Query: 120 GKIHGWGYNSYGQAANEKS 138
G+++ WG NSYGQ N ++
Sbjct: 136 GQVYSWGDNSYGQLGNNRT 154
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG GQLG+ + +S +P V L + D+ G H A+TS +Y WG
Sbjct: 239 VKSWGYNLYGQLGNSATKS---STVPVDVDWL--TDVSDIEAGAWHNYAMTSDSHVYGWG 293
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQL G Q + I + T IP L GVQ +A G H + D +
Sbjct: 294 NNQYGQLLEGDQADGDN-ISRTNRTAPVEIPRL---EGVQHLAAGARHGVAVTAD-DVFT 348
Query: 125 WGYNSYGQAAN 135
WG NS GQ N
Sbjct: 349 WGNNSEGQLGN 359
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ +WG + GQLG G T S S P + FR + G + S TL D
Sbjct: 32 VLSWGAGRTGQLGNG--TLSDSLSPASVTSLFRGDVDQMSAGGT---SSADSFTLART-D 85
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WG+NS GQ N +T P+ V V+ +AAGG H+ L
Sbjct: 86 KTVKAWGHNSAGQLGNGGNTNQAVPTTVPRLT-NVKDIAAGGKHALAL 132
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4087 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4143
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4144 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4190
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4240
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4193 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4250 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4299
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4300 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3983 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4036
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4037 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4081
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4082 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4037 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4094 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4143
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4144 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4187
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4094 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4150
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4151 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4197
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4247
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4200 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4257 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4306
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4307 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3990 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4043
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4044 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4088
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4089 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4044 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4101 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4150
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4151 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4194
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG HT LT G L+ +
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDS---PSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV N V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELAGNRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
GK+ +G GQ N + P P+ E K + ++ A
Sbjct: 315 GKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIA 365
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 NGVQ--------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
V+ ++ G +H++ G I+ WG N +GQ + + PS ++
Sbjct: 183 QIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDN 242
Query: 153 E-VRKLAAGGGHSAVLT 168
+ V LA GG H+A+LT
Sbjct: 243 QKVEFLACGGSHTALLT 259
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L GI + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGL T ++ P L+ V+ +ACG SHT + +DG
Sbjct: 216 GKNEFGQLGL-------------DHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V G V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4146
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4147 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4193
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4194 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4246
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4197 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4253
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4254 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4295
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4296 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4344
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4249 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4306 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4347
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4116
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4117 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4168
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4169 EALQGHRVVDIACGSGDAQTL 4189
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4300 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4347
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4348 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4375
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3985 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4040
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4041 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4093
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4094 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4143
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4314
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4315 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4314
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4315 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4006
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGH--SHTLVYMR 118
G + G+LG SD+ + P LV V G ++V ACG + TL
Sbjct: 4007 GKGRYGRLG-------------HSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTD 4053
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4054 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4106
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4057 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4114 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4155
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4156 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E +NI L GV + CG +L +
Sbjct: 3175 VFSWGDGDFGKLGRG---------GSEGCNIPQNIERL-NGQGVCQIECGAQFSLALTKS 3224
Query: 120 GKIHGWGYNSY 130
G + W Y S+
Sbjct: 3225 GVVWTW-YVSF 3234
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4109 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4166 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4207
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3976
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3977 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4028
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4029 EVLQGHRVVDIACGSGDAQTL 4049
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGLSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4160 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4207
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4208 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4235
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3845 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYA-T 3900
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3901 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3953
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3954 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4003
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTLPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 SEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H + G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4083
Query: 88 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ G ++ VA G +H+ G ++ WG YG+ + S P
Sbjct: 4084 PRVIESL------RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4137
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4138 LVEALQGHRVVDVACGSGDAQTL 4160
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALYA 62
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA--- 4324
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
AG+L + +P E + + + IPI+
Sbjct: 4325 ----SAGKLPVQ--------VPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGVGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4114
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Papio anubis]
Length = 932
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL + G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPV 223
>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Nomascus leucogenys]
Length = 932
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL + G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPV 223
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 16/129 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G G+LGH GD + P++V++L G I D++ GG H+ ALT +G +++
Sbjct: 324 LYTWGRGDNGRLGH-----GDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFS 378
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG G T S P + F+N +++++ G H++ +G +
Sbjct: 379 WGRGENGQLGHGTFT-SQQMTPKQIQA-FQN-------KTIKVISAGGYHSIAIDTNGSM 429
Query: 123 HGWGYNSYG 131
WG YG
Sbjct: 430 FAWGRGDYG 438
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 28/191 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +G+LGH +L+S + L + + VA GG HT ALT G +Y++G
Sbjct: 182 LYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFG 241
Query: 65 GCQAGQLGLG---------PQTRSFS--------------FIPNESDTYFRNIPILVVPN 101
G + QLGLG PQ +F + N + T F N N
Sbjct: 242 GNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLF-NKQQQQSSN 300
Query: 102 GVQLV---ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKL 157
+ + +C + + + G ++ WG G+ + S P V G + +
Sbjct: 301 KIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDM 360
Query: 158 AAGGGHSAVLT 168
+ GGGHS LT
Sbjct: 361 SLGGGHSMALT 371
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G GQLGH + S +++ P+++ A IK ++ GG H+ A+ + G+++AW
Sbjct: 375 EVFSWGRGENGQLGHGTFTS--QQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAW 432
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---------------VAC 108
G G LG+ S I N P+L+ V+
Sbjct: 433 GRGDYGVLGVSSSLDSLGDI---------NSPVLIKSLNNSNGSNNSNSSAGERFINVSS 483
Query: 109 GHSHTLVYMRDGKIHGWGYNS 129
G H + +G ++ WG S
Sbjct: 484 GFQHNVAQTENGDLYSWGCGS 504
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++ G +HT +T KG LY WG G+LG G S+ +F P L V +
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLE---SYSEPRLVEFFETKPSLRVVS-- 220
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
VA G HT+ G ++ +G N Q + ++Y +P
Sbjct: 221 --VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTP 261
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I ++C + A++ G LY WG G+LG G D+ ++ P V+
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHG-------------DSLMQSTPKQVMS 351
Query: 101 -NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEK-STYAWYPSPVDWCVGEVRK 156
+G +V + G H++ + G++ WG GQ + ++ P + + K
Sbjct: 352 LHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIK 411
Query: 157 LAAGGGHSAVLTD 169
+ + GG+ ++ D
Sbjct: 412 VISAGGYHSIAID 424
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 3743 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 3799
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 3800 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 3846
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 3896
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 3849 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3905
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 3906 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 3953
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 3954 YAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3639 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 3692
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 3693 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 3737
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 3738 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3791
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 3693 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 3750 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 3799
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 3800 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 3843
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3063 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3119
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3120 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3169
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3170 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3218
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3114 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3228
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3229 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3288
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3289 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3320
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4110
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4111 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4157
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4158 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4210
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4161 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4218 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4259
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4260 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4308
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4213 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4270 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4311
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4080
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4081 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4132
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4133 EALQGHRVVDIACGSGDAQTL 4153
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2952 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3008
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3009 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3061
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3062 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3115
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4264 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4311
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4312 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4339
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3949 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4004
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4005 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4057
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4058 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4107
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3067 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3123
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3124 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3174 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3222
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3118 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3232
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3233 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3292
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3293 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3324
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G + DVA GG H+ +T+ G LY W
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4116
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4117 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4163
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4164 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4216
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4167 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4224 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4265
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 SEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4314
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H + G +Y WG
Sbjct: 4219 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4276 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4317
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2956 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3012
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3013 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3065
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3066 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3119
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4029 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4082
Query: 88 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ G ++ VA G +H+ G ++ WG YG+ + S P
Sbjct: 4083 PRVIESL------RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4136
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4137 LVEALQGHRVVDVACGSGDAQTL 4159
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALYA 62
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 4270 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA--- 4323
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
AG+L + +P E + + + IPI+
Sbjct: 4324 ----SAGKLPVQ--------VPMEYN-HLQEIPII 4345
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3955 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 4010
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4011 GYGAGGRLGVGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4063
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4064 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4113
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4119 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4169 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4226 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4267
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4221 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4278 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4319
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4088
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4089 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4141 EALQGHRVVDVACGSGDAQTL 4161
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGLSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4319
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4320 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3957 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4012
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4013 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4065
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3076 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3132
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3133 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3182
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3183 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3231
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3127 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3241
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3242 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3301
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3302 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3333
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4125
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4126 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTD 4172
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4173 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4225
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPVLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4176 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4232
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4233 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4274
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4275 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4323
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4228 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4285 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4326
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4095
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4096 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4147
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4148 EALQGHHVVDVACGSGDAQTL 4168
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2965 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3021
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3022 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3074
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3075 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3128
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4279 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4327 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4354
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3964 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4019
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4020 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4072
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4073 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4122
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4119 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTD 4165
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPVLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4169 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4226 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4267
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4221 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4278 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4319
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4088
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4089 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4141 EALQGHHVVDVACGSGDAQTL 4161
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4319
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4320 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3957 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4012
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4013 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4065
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG S GQLG S SG E P V L GI I ++CG + A+T GA+Y W
Sbjct: 157 EIYCWGSNSHGQLGLGS--SGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGW 214
Query: 64 GGCQAGQLGLG-----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G GQLGLG PQ + + TY R CG HT R
Sbjct: 215 GKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR---------------CGMDHTAALTR 259
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG + +G YGQ + S P V +G V ++ G H+
Sbjct: 260 DGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHT 306
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI---FIKDVACGGVHTCALTSKGALY 61
++++GL GQLGHC ++ R +DG+ I VACG HT A G ++
Sbjct: 55 LFSFGLNDYGQLGHCRSRT--------RAEPVDGLEAHNITQVACGAQHTLAQNEWGEVF 106
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG GQLGL + S +P + + L VQ +ACG SH++ G+
Sbjct: 107 AWGSNSNGQLGLNVEE---SMMPTP-----KMVKSLATKQVVQ-IACGRSHSMALTNVGE 157
Query: 122 IHGWGYNSYGQ 132
I+ WG NS+GQ
Sbjct: 158 IYCWGSNSHGQ 168
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQLG +S P+ V +L + +ACG H+ ALT+ G +Y W
Sbjct: 104 EVFAWGSNSNGQLGLNVEESMMPT--PKMVKSLATKQVVQIACGRSHSMALTNVGEIYCW 161
Query: 64 GGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVY 116
G GQLGLG P+T+ P LV + G+ + ++CG +
Sbjct: 162 GSNSHGQLGLGSSGTPETK----------------PCLVKLLQGIPISHISCGADFSFAV 205
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
G ++GWG NS+GQ +T P+ + V + G H+A LT
Sbjct: 206 TPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALT 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGHC+ E+LPR+V+ L G + + CG HT A SKG +YA+
Sbjct: 263 VFTFGAGMYGQLGHCT---SANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAF 319
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 320 GLGGSGQLG 328
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI--LV 98
I V CG HT + G L+++G GQLG RS + R P+ L
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLG---HCRSRT----------RAEPVDGLE 82
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVD-WCVGEVRK 156
N Q VACG HTL G++ WG NS GQ N + + P V +V +
Sbjct: 83 AHNITQ-VACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141
Query: 157 LAAGGGHSAVLTDA 170
+A G HS LT+
Sbjct: 142 IACGRSHSMALTNV 155
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 92 RNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
R P +V + VQ V CG +HT++ M+DGK+ +G N YGQ + +S PVD
Sbjct: 26 RASPFTLVDDIVQ-VGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTR--AEPVDGLE 82
Query: 152 G-EVRKLAAGGGHS 164
+ ++A G H+
Sbjct: 83 AHNITQVACGAQHT 96
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 133 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 187
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 188 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 238
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 285
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 236 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 293
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 294 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 343
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 394
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 342 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 399 GCGARGQLGTG 409
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 290 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 346
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 347 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 396
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 397 AFGCGARGQLGTGHTCNVKCPSPV 420
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 83 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 141 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 188
Query: 127 YNSYGQ 132
S GQ
Sbjct: 189 AGSDGQ 194
>gi|294935296|ref|XP_002781372.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239891953|gb|EER13167.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1285
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 28/176 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-----GIFIKDVACGGVHTCALTSKG 58
++Y G SVGQLG +G+ E + L+ G+ I+ ++ G H CA++ G
Sbjct: 201 EVYGTGNNSVGQLG-----TGNTEEITTPKAVLNCGQTYGVPIRQISAGDAHACAISISG 255
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI---PILVVP--NGVQLVACGHSHT 113
L+ WG + GQLG + R + P+ +P VQ+ +CG HT
Sbjct: 256 VLFTWGSNRKGQLG-------------RENAGHREVLPGPVSCLPPTKAVQMASCGAQHT 302
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ G+++ WG N+ GQ + P P++ EV + A GGH + D
Sbjct: 303 AAVVQGGQVYLWGDNASGQCGVDVVEEPILPIPINLQSKEVWRTVACGGHHTLFLD 358
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGALYAW 63
++TWG GQLG + +G +E+LP V L ++ +CG HT A+ G +Y W
Sbjct: 257 LFTWGSNRKGQLGREN--AGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQGGQVYLW 314
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ------LVACGHSHTLVYM 117
G +GQ G+ PIL +P +Q VACG HTL
Sbjct: 315 GDNASGQCGVD----------------VVEEPILPIPINLQSKEVWRTVACGGHHTLFLD 358
Query: 118 RDGKIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G++ G G N GQ + P+ + + V +AAG HSAVL
Sbjct: 359 VNGQLFGCGSNEDGQLGTGFPGRSSELRPTLMPRSLA-VFSVAAGRSHSAVL 409
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 11 GSVGQLGHCSLQSGD--KELLPRRVVA---LDGIFIKDVACGGVHTCALTSKGALYAWG- 64
G + + G+ + GD + L R+VA L+ F+ V CG HT ALTS WG
Sbjct: 96 GGLNEKGYITGPDGDDSESLFKPRLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGR 155
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G S +P ++V P V VACG TL+ + G+++G
Sbjct: 156 DNEFGQVGHG--QPSIKPMPPR---------MMVTPQEVCQVACGGDFTLLLLETGEVYG 204
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVLT 168
G NS GQ + P V C G+ +R+++AG H+ ++
Sbjct: 205 TGNNSVGQLGTGNTEEITTPKAVLNC-GQTYGVPIRQISAGDAHACAIS 252
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G + DVA GG H+ +T+ G LY W
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4119 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4169 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4226 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4267
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4268 SEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H + G +Y WG
Sbjct: 4221 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4278 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4319
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4084
Query: 88 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ G ++ VA G +H+ G ++ WG YG+ + S P
Sbjct: 4085 PRVIESL------RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4138
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4139 LVEALQGHRVVDVACGSGDAQTL 4161
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALYA 62
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA--- 4325
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
AG+L + +P E + + + IPI+
Sbjct: 4326 ----SAGKLPVQ--------VPMEYN-HLQEIPII 4347
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3957 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 4012
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4013 GYGAGGRLGVGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4065
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4115
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G SLQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTSLQGIVAE--PQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4119 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4169 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4226 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4267
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4268 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4221 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4278 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4319
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4088
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4089 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4141 EALQGHRVVDVACGSGDAQTL 4161
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4319
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4320 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3957 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4012
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4013 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4065
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4314
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 4315 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3046 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3102
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3103 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3152
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3153 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3201
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 549 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 605
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 606 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 653
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 654 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 704
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3097 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3211
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3212 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3271
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3272 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3303
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4095
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4096 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4142
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4143 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4195
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 493 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 547
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 548 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 594
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 595 TLAVTENGQVWSWGDGDYGK 614
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4146 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4202
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4203 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4244
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4245 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4293
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4198 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4255 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4296
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4065
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4066 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4117
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4118 EALQGHRVVDVACGSGDAQTL 4138
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 604 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 660
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 661 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 708
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 709 HSWGSNDQCQ 718
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2935 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2991
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2992 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3044
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3045 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3098
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4249 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4296
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4297 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4324
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 460 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 513
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 514 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 573
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 574 LVAGLKGLKVIDVACGSGDAQTL 596
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3934 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3989
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3990 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4042
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4043 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4092
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3061 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3117
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3118 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3167
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3168 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3216
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3112 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3226
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3227 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3286
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3287 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3318
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4001 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4057
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4058 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4104
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4105 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4157
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4108 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4165 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4206
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4207 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4255
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4160 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4216
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4217 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4258
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4027
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4028 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4079
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4080 EALQGHRVVDIACGSGDAQTL 4100
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2950 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3006
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3007 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3059
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3060 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3113
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4211 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4258
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4259 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4286
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 2555 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 2611
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 2612 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 2658
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 2708
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 2661 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2717
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 2718 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 2767
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 2768 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 2451 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 2504
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 2505 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 2549
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 2550 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2603
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 2505 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 2562 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 2611
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 2612 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 2655
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4065 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4121
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4122 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4168
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4171 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + IP+L ++ VA G HTL +G ++
Sbjct: 4228 --QDRLIGL-PEGRA------RNHNRPQQIPVL-AGMIIEDVAVGAEHTLALASNGDVYA 4277
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4278 WGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3961 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4014
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4015 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4059
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4060 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4113
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4015 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4072 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4121
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4122 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4165
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG +GQLG L D E P + LD ++ +ACGG HT LT+ G ++ +
Sbjct: 179 NVYSWGRNDLGQLG---LGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 235
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV N V +ACG HTL Y+ D
Sbjct: 236 GAGKYGQLG-----------HNSTQNELR--PRLVTELAGNRVTQIACGRRHTLAYVSDL 282
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----------LAAGGGHSAVL 167
GK+ +G GQ N + P P+ E K + AGG S +L
Sbjct: 283 GKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLL 341
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN-ESDTYFRNIPILVV 99
I +ACG H+ AL+ G L+AWG GQLG+G R F+ IP ++ + +P+
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVG---RLFASIPTPQAVEHLSGVPL--- 161
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
VQ ++ G +H++ G ++ WG N GQ + +PS ++ +V LA
Sbjct: 162 ---VQ-ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 217
Query: 159 AGGGHSAVLT 168
GG H+A+LT
Sbjct: 218 CGGSHTALLT 227
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 126 ELFAWGQNLHGQLGVGRLFASIPT--PQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSW 183
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG T + P L+ V+ +ACG SHT + DG
Sbjct: 184 GRNDLGQLGLG-------------HTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDG 230
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G YGQ + + P V G V ++A G H+
Sbjct: 231 LVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHT 275
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGHE--REGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4087
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4088 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4140 EALQGHRVIDIACGSGDAQTL 4160
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4319 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK PR + +L I+D+ACG H+ A+TS G LY WG
Sbjct: 2898 VFSWGEGEDGKLGHGNSISLDK---PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 2954
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT ++ P LV V V +ACG + T+ D
Sbjct: 2955 LGEYGRLGHG-------------DTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTAD 3001
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P +D G V ++ G S LT
Sbjct: 3002 GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3051
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G I D+ACGG H+ A+TS G LY WG
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 3948
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G + E+ ++ I VACG + TL D +
Sbjct: 3949 KGRYGRLGHGDSEDQLTPKLIEALQDYKVID----------VACGSGDAQTLCVTDDDNV 3998
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG YG+ S P ++ G V K+ G S LT
Sbjct: 3999 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4045
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWGLG G+LGH + K P+ V +L G + +ACG T ALT+ G +Y
Sbjct: 2949 ELYTWGLGEYGRLGHGDTATQSK---PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVY 3005
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+WG G+LG G ++ P+L+ GV + CG +L +
Sbjct: 3006 SWGDGDFGKLGRGGSDGCYT-------------PLLIDRLNGLGVVQIECGAQFSLALTK 3052
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG Y + + + P+ V+ G ++ +A G H +TD
Sbjct: 3053 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH ++ D+ P+ + AL I +ACG ++ AL+S G LY WG
Sbjct: 523 VYSWGNGECGRLGHGNMTWYDE---PKLIEALVEKNITFIACGSTYSAALSSNGELYTWG 579
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACG---HSHTLVYMR 118
G+LG G + IP LV NG V VACG TL
Sbjct: 580 RGNYGKLGHGNSDKDVM------------IPTLVTALNGHMVVYVACGGGRDPQTLCVTA 627
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG ++G+ + P VD + V K+ G SA LT
Sbjct: 628 SGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT 678
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G+ G+LG C D P+ V L I + V CG + ALT+ G +Y
Sbjct: 631 VFSWGDGNHGKLGRGGC-----DGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYT 685
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + +LG G NE + I ++ ++ + GH H L D +
Sbjct: 686 WGKGEDYKLGHG----------NEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLV 735
Query: 123 HGWGYNSYGQ 132
+GWG N +GQ
Sbjct: 736 YGWGRNDHGQ 745
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGG---VHTCALTSKGA 59
++YTWG G+ G+LGH + DK+ ++P V AL+G + VACGG T +T+ G
Sbjct: 574 ELYTWGRGNYGKLGH---GNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGI 630
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P D ++ V V CG +
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKT--PKIVDK--------LLDINVAKVYCGQQFSAALTAY 680
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP +D +++ L G H LT+
Sbjct: 681 GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTE 731
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG G +LGH + D PR+V AL G I +A G +H A T KG ++ WG
Sbjct: 4050 IYTWGKGDYHRLGHGT---DDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4106
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4107 DNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4148
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P + L+G+ + + CG + ALT G ++ WG
Sbjct: 3004 VYSWGDGDFGKLGRGG---SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWG 3060
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3061 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQV 3108
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACSL 173
+ WG N +GQ N + PS V + V +++ G HS VLTD ++
Sbjct: 3109 YAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAI 3162
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 3997 NVWSWGDGDYGKLGRGG---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTW 4053
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4054 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4101
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4102 VFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4145
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +Y WGL QLG G K LP L + +A G ++ +G LY
Sbjct: 2789 HSAVYVWGLNDKDQLGGLK---GSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLY 2845
Query: 62 AWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A G G+LGLG + IP S + + V G H L +D
Sbjct: 2846 ACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVA----------VHSGGKHALALTQD 2895
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GK+ WG G+ + S P ++ + +R +A G GHSA +T + L
Sbjct: 2896 GKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+VG+LG + D ++P + ++ +F+K VA GG H AL+S+G +Y+
Sbjct: 3838 VYATGYGAVGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 3894
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + +Y R P L+ + + +ACG H+
Sbjct: 3895 WGEGDDGKLGHGNRL-----------SYDR--PKLIEELLGTEIVDIACGGHHSAAITSA 3941
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P ++ +V +A G G + L
Sbjct: 3942 GWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL 3990
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L P+ + L IK VA GG H ALT G +++
Sbjct: 2844 LYACGEGTNGRLG---LGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 2900
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G S S + P L+ ++ +ACG H+
Sbjct: 2901 WGEGEDGKLGHG---NSISL----------DKPRLIESLKSKRIRDIACGSGHSAAITSS 2947
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
G+++ WG YG+ + + P V VG+ V ++A G
Sbjct: 2948 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACG 2989
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G I VA G +H A+T G +YAW
Sbjct: 3055 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAW 3111
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G + I N+ + + V V+CG SH++ ++
Sbjct: 3112 GDNDHGQQGNG------TTIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3155
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + + G A+T+ G +YA G
Sbjct: 3786 IYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG+G T S +P T +I + V V G H L +G ++
Sbjct: 3843 YGAVGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYS 3894
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 3895 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSA 3941
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQ 104
G H ALT ++Y+WG + G+LG G T + + P L+ V +
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLGHGNMT-------------WYDEPKLIEALVEKNIT 557
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ACG +++ +G+++ WG +YG+
Sbjct: 558 FIACGSTYSAALSSNGELYTWGRGNYGK 585
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G +LGH + D P+ + L IKD+ G +H ALT +Y W
Sbjct: 682 EVYTWGKGEDYKLGHGN---EDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGW 738
Query: 64 GGCQAGQL 71
G GQ+
Sbjct: 739 GRNDHGQI 746
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4101 EVFTWGDNDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAW 4148
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+A Q + T P E D +++P V+ N + L+
Sbjct: 4149 STMKATQSKMPATT------PMEYD-LVKDLPFPVLHNRLVLL 4184
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 2820 IFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 2876
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2877 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2926
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2927 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2975
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + D+A GG H+ +T+ G LY W
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 3869
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 3870 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 3919
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 3920 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3969
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2871 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2985
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2986 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3045
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3046 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3920 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3976
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3977 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4018
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4019 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4067
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3972 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4029 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4070
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2709 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2765
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 2766 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 2818
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
KI WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 2819 KIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 2872
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3839
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G ++ WG YG+ + S P V
Sbjct: 3840 ES-LRGIEVVD-------IAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLV 3891
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3892 EALQGYRVIDIACGSGDAQTL 3912
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G I VACG HT A TSK A
Sbjct: 4023 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 4076
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3708 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYA-T 3763
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3764 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3816
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3817 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 3866
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 411 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 467
Query: 65 GCQAGQLGLGPQ 76
+LG G +
Sbjct: 468 KGDNQRLGHGTE 479
>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pan paniscus]
gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Gorilla gorilla gorilla]
gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
Length = 932
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL + G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPV 223
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3135 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3191
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3192 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3241
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3242 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3290
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 640 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 696
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 697 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 744
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 745 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 795
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3186 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3300
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3301 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3360
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3361 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3392
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4183
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4184 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4230
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4231 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4283
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 584 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 638
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 639 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 685
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 686 TLAVTENGQVWSWGDGDYGK 705
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4234 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4290
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4291 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4332
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4333 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4381
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4286 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4343 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4384
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4153
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4154 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4205
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4206 EALQGHRVIDIACGSGDAQTL 4226
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 695 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 751
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 752 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 799
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 800 HSWGSNDQCQ 809
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 3024 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3080
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3081 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3133
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3134 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3187
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4337 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4384
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4385 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4412
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 551 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 604
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 605 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 664
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 665 LVAGLKGLKVIDVACGSGDAQTL 687
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 4022 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4077
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4078 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4130
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4180
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3074 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3130
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3131 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3180
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3181 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 577 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 633
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 634 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 681
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 682 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 732
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3125 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3239
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3240 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3299
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3300 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3331
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4122
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4123 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4169
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4170 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4222
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 521 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 575
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 576 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 622
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 623 TLAVTENGQVWSWGDGDYGK 642
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4173 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4229
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4230 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4271
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4272 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4320
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4225 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4282 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4323
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4092
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4093 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4144
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4145 EALQGHRVIDIACGSGDAQTL 4165
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 632 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 688
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 689 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 736
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 737 HSWGSNDQCQ 746
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2963 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3019
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3020 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3072
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3073 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3126
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4323
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4324 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4351
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 488 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 541
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 542 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 601
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 602 LVAGLKGLKVIDVACGSGDAQTL 624
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3961 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4016
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4017 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4069
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4070 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4119
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2820 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2876
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2877 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2926
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2927 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2975
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 548 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 604
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 605 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 652
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 703
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2871 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2985
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2986 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3045
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3046 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3867
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 3868 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3914
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 3915 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3967
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3918 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3974
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3975 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4016
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4017 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4065
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G +LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 492 EVYSWGCGDGRRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 546
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 547 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 593
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 594 TLAVTENGQVWSWGDGDYGK 613
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3970 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4027 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4068
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3780 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3837
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3838 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3889
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3890 EALQGHRVVDIACGSGDAQTL 3910
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 603 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 659
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 660 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 707
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 708 HSWGSNDQCQ 717
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2709 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2765
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2766 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 2818
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 2819 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2872
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4021 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4068
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4069 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4096
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3706 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYA-T 3761
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3762 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3814
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3864
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L+P+ V L + +A G H AL + G +Y+WG +LG G +P
Sbjct: 459 LVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHG------DTVPL 512
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 513 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 572
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 573 LVAGLKGLKVIDVACGSGDAQTL 595
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3073 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3129
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3130 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3179
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3180 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3228
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 517 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 573
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 574 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 621
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3124 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3238
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3239 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3298
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3299 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3330
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4120
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4121 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4167
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4171 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4228 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4269
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4270 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 461 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 515
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 516 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 562
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 563 TLAVTENGQVWSWGDGDYGK 582
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4223 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4280 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4321
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4090
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4091 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4142
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4143 EALQGHRVVDIACGSGDAQTL 4163
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 572 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 628
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 629 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 677 HSWGSNDQCQ 686
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2962 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3018
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3019 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3071
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3072 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3125
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4322 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4349
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 481
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTL 564
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3959 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4014
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4015 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4067
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4117
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + + D+ P + +L+ I +A GG H+ A + G ++ WG
Sbjct: 179 VWTWGRNIYGQLGDGT--TTDRNT-PVQTRSLNTII--SIAGGGYHSLAQKADGTIWTWG 233
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRDGK 121
Q GQLG G T R IP+LV NG++ ++ CG H++V +G
Sbjct: 234 LNQYGQLGDGTITN-------------RTIPVLV--NGIKDVSMIRCGGDHSIVLKNNGT 278
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEF-- 179
I WG+N +GQ + + P P+ + + + GG HS +L ++
Sbjct: 279 IWIWGFNQHGQLGDRSTDNRSTPVPMG-DLKNIMTIDGGGDHSLILKSDGTVWTWGNNEN 337
Query: 180 -RLAESVTLSNASEIE 194
+L + T+S A+ I+
Sbjct: 338 GQLGDGTTMSRATPIQ 353
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG GQLG + + D+++ P +V L+ + +A G H+ ALTS G ++ WG
Sbjct: 79 VLTWGQNMHGQLGDGT--NTDRKI-PVQVKDLNNV--TAIAGGAWHSVALTSDGTVWTWG 133
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G T RN P+ V + +A H L DG +
Sbjct: 134 SNWAGQLGDGT-------------TKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVW 180
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG N YGQ + +T P + + +A GG HS
Sbjct: 181 TWGRNIYGQLGDGTTTDRNTPVQTR-SLNTIISIAGGGYHS 220
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG +S D P + L I D GG H+ L S G ++ WG
Sbjct: 279 IWIWGFNQHGQLGD---RSTDNRSTPVPMGDLKNIMTID--GGGDHSLILKSDGTVWTWG 333
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G T R PI + V +A G H++ DG I
Sbjct: 334 NNENGQLGDGT-------------TMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIW 380
Query: 124 GWGYNSYGQ 132
WG N GQ
Sbjct: 381 AWGSNRNGQ 389
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I V+ G H+ AL S G + WG GQLG G T R IP+ V
Sbjct: 60 ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTD-------------RKIPVQVKD 106
Query: 101 -NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
N V +A G H++ DG + WG N GQ + + P V+ + + +A+
Sbjct: 107 LNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVN-NLKNITAIAS 165
Query: 160 GGGHSAVL 167
G H+ L
Sbjct: 166 KGLHNLAL 173
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + S P + L + +A G H+ AL S G ++AWG
Sbjct: 329 VWTWGNNENGQLGDGTTMS---RATPIQASTLSNV--TAIASGEQHSIALKSDGTIWAWG 383
Query: 65 GCQAGQLGLG 74
+ GQLG G
Sbjct: 384 SNRNGQLGDG 393
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S L PR++ I+D++CG H+ A+ S G LY WG
Sbjct: 536 VYSWGDGEEGKLGHGSRADA---LTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG 592
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGH--SHTLVYMRDG 120
G+LG G + T + P+ + +G Q+ VACG + TL +DG
Sbjct: 593 HGMYGRLGHG-----------NNHTLLKPKPVQAL-SGQQVVQVACGSRDAQTLCLTQDG 640
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG +G+ S P PV+ G+ V K+ G S L+
Sbjct: 641 LVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALS 689
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 83/211 (39%), Gaps = 48/211 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALYA 62
+YTWG G G+LGH + + L P+ V AL G + VACG T LT G +Y+
Sbjct: 588 LYTWGHGMYGRLGHGNNHT---LLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYS 644
Query: 63 WGGCQAGQLGLG---------PQTR-------------SFSF------------------ 82
WG G+LG G P R FS
Sbjct: 645 WGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFR 704
Query: 83 IPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ + SD + R ++ + + V VA G H L G++ WG N +GQ N +T
Sbjct: 705 LGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTV 764
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
P V G ++ KLA G HS D
Sbjct: 765 NRKPMKVQGLEGVKITKLACGSSHSIAFADT 795
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + S D PR + +L G I VA GG H+ A+ + G LY W
Sbjct: 1513 EVYSWGEGVDGKLGHGNRSSLDH---PRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1569
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMR 118
G + G+LG D+ + P LV N V VACG+ + TL
Sbjct: 1570 GKGRYGRLG-------------HEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITE 1616
Query: 119 ----DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P+ +D +G+ + +A G S L+ A
Sbjct: 1617 GTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKA 1673
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K P L + + V G A+T G +YA G
Sbjct: 431 VFVWGLNDKDQLGGLK---GSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 487
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGKI 122
+G+LGLGP T S S + ++ P ++ +A G H + DG +
Sbjct: 488 ESTSGRLGLGPVTGSVSRLTQ-----------VLFPQPIKKLAVHSGGRHAMALTYDGHV 536
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG G+ + A P ++ + +R ++ G HSA + + +L
Sbjct: 537 YSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTL 588
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S + + P+ + +L G+ + +V+ G +H A G +Y WG
Sbjct: 1676 VYTWGKGDYYRLGHGSDEHVRR---PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWG 1732
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQ+G G T IP LV + + V+CG +HT+ + +
Sbjct: 1733 DNDEGQIGDG-------------TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSE 1779
Query: 122 IH 123
H
Sbjct: 1780 SH 1781
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P + L G I VACG + AL+ G +Y WG
Sbjct: 1624 VWSWGDGDYGKLGR---GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWG 1680
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G SD + R ++ G+++ V+ G H + + +G +
Sbjct: 1681 KGDYYRLGHG------------SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1728
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 165
+ WG N GQ + + P V G + ++ G H+
Sbjct: 1729 YTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1772
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYA 62
++ G G+ G+LG + S + +P + ++ + I V+ GG H AL+++G +Y+
Sbjct: 1460 VFATGYGAGGRLG---IGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYS 1516
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G N S I + + + VA G SH+ G +
Sbjct: 1517 WGEGVDGKLGHG----------NRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGL 1566
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG YG+ +E S P V+
Sbjct: 1567 YTWGKGRYGRLGHEDSEDQLKPKLVN 1592
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
D+YTWG GQ+G + Q+ +PR V AL G I V+CG HT A
Sbjct: 1727 DVYTWGDNDEGQIGDGTTQATQ---IPRLVAALQGHHISHVSCGSAHTVA 1773
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG G K +P +L + + G +T +G ++A G
Sbjct: 1408 IFGWGHNHRGQLGG---PEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATG 1464
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG+G + IP ++ +++ I V V G H L +G+++
Sbjct: 1465 YGAGGRLGIG--SNESVAIPTLIES-IQHVHITQVS-----VNAGGKHILALSNEGEVYS 1516
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + + +P ++ G+ + K+A GG HSA +
Sbjct: 1517 WGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAI 1560
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2764 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2820
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2821 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2870
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2871 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2919
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2815 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2929
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2930 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2989
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2990 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3021
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3811
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 3812 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3858
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 3859 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3911
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3862 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3918
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3919 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3960
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3961 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4009
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3914 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3971 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4012
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3781
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3782 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3833
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3834 EALQGHRVVDIACGSGDAQTL 3854
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2653 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2709
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2710 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 2762
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 2763 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2816
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 470 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 524
Query: 58 GALYAWGGCQAGQLGLG 74
G LY WG G+LG G
Sbjct: 525 GELYTWGRGNYGRLGHG 541
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 70/189 (37%), Gaps = 63/189 (33%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSK---- 57
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T
Sbjct: 526 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTR 582
Query: 58 ---------GALYAWGGCQA---GQLGLGPQTRSFSFIPNESDTYF------RNIPIL-- 97
G L G ++ QLG+G + R + P + D F R++ +
Sbjct: 583 LSVLWRSVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVLTRDVMLREG 642
Query: 98 ----------VVPNGVQL------------------------VACGHSHTLVYMRDGKIH 123
VP V VA G +H L D ++H
Sbjct: 643 QIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVH 702
Query: 124 GWGYNSYGQ 132
WG N Q
Sbjct: 703 SWGSNDQCQ 711
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 3965 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4012
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4013 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4040
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 437 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 490
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 491 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 550
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 551 LVAGLKGLKVIDVACGSGDAQTL 573
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3650 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3705
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3706 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3758
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3759 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3808
>gi|440800097|gb|ELR21140.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1794
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-----IFIKDVACGGVHTCALTSKG 58
D++TWG G G LGH +++ + +L + G IFIK VACG T A+ + G
Sbjct: 231 DVFTWGYGGRGALGHPNIRITGEPMLVEYFRSPGGDAATRIFIKSVACGESFTIAVAANG 290
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYF---RNIPILVVPNGVQL-VACGHSHTL 114
Y WG GQLGLGP P + ++ I L N V + VACG SHTL
Sbjct: 291 HAYGWGEHAFGQLGLGP----IPETPMQHSAFYPCPTLISSLAEANQVVVSVACGASHTL 346
Query: 115 VYMRDGKIHGWGYNSYGQAAN 135
G ++ G N GQ N
Sbjct: 347 FLTDVGHVYSCGSNVLGQLGN 367
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 31/149 (20%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD--TYFRNIPILV 98
I VACG H +T +G ++ WG G LG P R I E YFR+
Sbjct: 213 IVHVACGAQHMACVTDEGDVFTWGYGGRGALG-HPNIR----ITGEPMLVEYFRS----- 262
Query: 99 VPNG-------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ------AANEKSTYAWYPS 145
P G ++ VACG S T+ +G +GWG +++GQ A+YP
Sbjct: 263 -PGGDAATRIFIKSVACGESFTIAVAANGHAYGWGEHAFGQLGLGPIPETPMQHSAFYPC 321
Query: 146 P-VDWCVGE----VRKLAAGGGHSAVLTD 169
P + + E V +A G H+ LTD
Sbjct: 322 PTLISSLAEANQVVVSVACGASHTLFLTD 350
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 6 YTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKG 58
Y WG + GQLG +Q P + +L + VACG HT LT G
Sbjct: 293 YGWGEHAFGQLGLGPIPETPMQHSAFYPCPTLISSLAEANQVVVSVACGASHTLFLTDVG 352
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLV 115
+Y+ G GQLG G ++P+ + V ++CG +
Sbjct: 353 HVYSCGSNVLGQLGNGTD---------------HSLPVCIESLKSTKVTSISCGELFSAA 397
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
G++ WG S GQ ++ +A YP V + VG VR++A
Sbjct: 398 VTDRGELWMWGAGS-GQFGCKEGRHAEYPGQVGF-VGNVRQVA 438
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELL-PRRVV--ALDGIFIKDVACGGVHTCALTSK 57
DIY WG G VGQLG + D+ + P+R+ AL + V CG T LT
Sbjct: 47 DIYVWGSGQVGQLGLDPESEFELEDQYVSHPQRLRHEALLHKRVLQVCCGRDWTACLTDA 106
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
G LY WG QLG Q F+ + +Y
Sbjct: 107 G-LYTWGSNAYNQLGHHHQRELFTLMRELKQSY 138
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL----VVPNGVQL 105
H A++ +Y WG Q GQLGL P++ F D Y + L ++ V
Sbjct: 38 HNVAVSDVSDIYVWGSGQVGQLGLDPES-EFEL----EDQYVSHPQRLRHEALLHKRVLQ 92
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V CG T + D ++ WG N+Y Q
Sbjct: 93 VCCGRDWTAC-LTDAGLYTWGSNAYNQ 118
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S L PR++ I+D++CG H+ A+ S G LY WG
Sbjct: 537 VYSWGDGEEGKLGHGSRADA---LTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG 593
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGH--SHTLVYMRDG 120
G+LG G + T + P+ + +G Q+ VACG + TL +DG
Sbjct: 594 HGMYGRLGHG-----------NNHTLLKPKPVQAL-SGQQVVQVACGSRDAQTLCLTQDG 641
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG +G+ S P PV+ G+ V K+ G S L+
Sbjct: 642 LVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALS 690
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 83/211 (39%), Gaps = 48/211 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALYA 62
+YTWG G G+LGH + + L P+ V AL G + VACG T LT G +Y+
Sbjct: 589 LYTWGHGMYGRLGHGNNHT---LLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYS 645
Query: 63 WGGCQAGQLGLG---------PQTR-------------SFSF------------------ 82
WG G+LG G P R FS
Sbjct: 646 WGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFR 705
Query: 83 IPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ + SD + R ++ + + V VA G H L G++ WG N +GQ N +T
Sbjct: 706 LGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTV 765
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
P V G ++ KLA G HS D
Sbjct: 766 NRKPMKVQGLEGVKITKLACGSSHSIAFADT 796
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + S D PR + +L G I VA GG H+ A+ + G LY W
Sbjct: 1514 EVYSWGEGVDGKLGHGNRSSLDH---PRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1570
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMR 118
G + G+LG D+ + P LV N V VACG+ + TL
Sbjct: 1571 GKGRYGRLG-------------HEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITE 1617
Query: 119 ----DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P+ +D +G+ + +A G S L+ A
Sbjct: 1618 GTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKA 1674
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K P L + + V G A+T G +YA G
Sbjct: 432 VFVWGLNDKDQLGGLK---GSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 488
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGKI 122
+G+LGLGP T S S + ++ P ++ +A G H + DG +
Sbjct: 489 ESTSGRLGLGPVTGSVSRLTQ-----------VLFPQPIKKLAVHSGGRHAMALTYDGHV 537
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG G+ + A P ++ + +R ++ G HSA + + +L
Sbjct: 538 YSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTL 589
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S + + P+ + +L G+ + +V+ G +H A G +Y WG
Sbjct: 1677 VYTWGKGDYYRLGHGSDEHVRR---PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWG 1733
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQ+G G T IP LV + + V+CG +HT+ + +
Sbjct: 1734 DNDEGQIGDG-------------TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSE 1780
Query: 122 IH 123
H
Sbjct: 1781 SH 1782
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P + L G I VACG + AL+ G +Y WG
Sbjct: 1625 VWSWGDGDYGKLGR---GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWG 1681
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G SD + R ++ G+++ V+ G H + + +G +
Sbjct: 1682 KGDYYRLGHG------------SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1729
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 165
+ WG N GQ + + P V G + ++ G H+
Sbjct: 1730 YTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1773
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYA 62
++ G G+ G+LG + S + +P + ++ + I V+ GG H AL+++G +Y+
Sbjct: 1461 VFATGYGAGGRLG---IGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYS 1517
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G N S I + + + VA G SH+ G +
Sbjct: 1518 WGEGVDGKLGHG----------NRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGL 1567
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG YG+ +E S P V+
Sbjct: 1568 YTWGKGRYGRLGHEDSEDQLKPKLVN 1593
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
D+YTWG GQ+G + Q+ +PR V AL G I V+CG HT A
Sbjct: 1728 DVYTWGDNDEGQIGDGTTQATQ---IPRLVAALQGHHISHVSCGSAHTVA 1774
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG GQLG G K +P +L + + G +T +G ++A G
Sbjct: 1409 IFGWGHNHRGQLGG---PEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATG 1465
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG+G + IP ++ +++ I V V G H L +G+++
Sbjct: 1466 YGAGGRLGIG--SNESVAIPTLIES-IQHVHITQVS-----VNAGGKHILALSNEGEVYS 1517
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + + +P ++ G+ + K+A GG HSA +
Sbjct: 1518 WGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAI 1561
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 58 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 112
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 113 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 163
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 161 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 218
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 219 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 268
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 319
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 267 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 324 GCGARGQLGTG 334
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 215 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 271
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 272 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 321
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 322 AFGCGARGQLGTGHTCNVKCPSPV 345
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 8 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 66 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 113
Query: 127 YNSYGQ 132
S GQ
Sbjct: 114 AGSDGQ 119
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + ALD ++ +ACGG HT LT G L+ +
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDS---PSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV N V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELAGNRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
GK+ +G GQ N + P P+ E K + ++ A
Sbjct: 315 GKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIA 365
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTAP 182
Query: 101 NGVQ--------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
V+ ++ G +H++ G I+ WG N +GQ + + PS ++
Sbjct: 183 QIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDN 242
Query: 153 E-VRKLAAGGGHSAVLT 168
+ V LA GG H+A+LT
Sbjct: 243 QKVEFLACGGSHTALLT 259
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L GI + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G + GQLGL T ++ P L+ V+ +ACG SHT + +DG
Sbjct: 216 GKNEFGQLGL-------------DHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V G V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ V CG HT ALT +G +YAW
Sbjct: 200 EVYAWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAW 256
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G N+S+ + P+ V+ + V++ AC SHT +
Sbjct: 257 GANSYGQLGTG----------NKSNQSY---PVQVIVDKERIVEIAACHSSHTSAAKSQS 303
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 304 GQVYMWG 310
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + +PR+V + L + +ACG + + A+ G +YA
Sbjct: 147 EVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R V+ V CG++HTL +G +
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAHTLALTDEGVM 253
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + Y PV V + R + HS+
Sbjct: 254 YAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ G S G LG +GD + + PRR+ L G I ++ G G H +TS G +
Sbjct: 41 EVFVMGTNSSGCLG-----TGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEV 95
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+WG QLG G ++ S P + T N VACG H++V DG
Sbjct: 96 YSWGHNAYSQLGNGSTNQALS--PCQVSTNLIN-------KKAHSVACGSHHSMVLTCDG 146
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
+++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD 197
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALY 61
+Y WG S GQLG +G+K + P +V+ ++ AC HT A S+ G +Y
Sbjct: 253 MYAWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVY 307
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 308 MWGQCR-GQSVITPHLTHFS 326
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG GS G+LG S + + PR V +L + +ACG HT A+T+ G ++ WG
Sbjct: 209 IFSWGSGSWGKLGIGSDANAES---PRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG FS N S + G Q + CG HTLV +R G+++
Sbjct: 266 KGLRGQLGHKSVKEEFSPRLNAS----------LRKCGAQKIRCGDDHTLVILRSGQLYS 315
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G N++GQ +T P+ V E V + A G S LT+
Sbjct: 316 MGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTN 361
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
IYT+G G G+LGH + +E + P+R+ L + + +ACG T ALT G +Y
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYT 576
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LGLG +P ++ V ++ G +H K
Sbjct: 577 WGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHV--------VCQISLGRNHAACSTDMHKF 628
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV---GEVRKLAAGGGHSAVLTDACSL 173
WG N++GQ + ++ P P + +R +A GG H+ + T+ S+
Sbjct: 629 FVWGSNTFGQLGIPHIS-SYMPDPYEITSLREANIRSIACGGWHTLISTNTGSV 681
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD-----KELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y WG G GQLG SL++ D P+ V+ L FI +ACG H LTS+
Sbjct: 1234 VYAWGAGDRGQLG--SLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQ 1291
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ +WG + GQLGL + P P ++ CG H+ +
Sbjct: 1292 VLSWGAGEFGQLGLDHNLSKGT--PQMVKALDGRAPCKIL--------CGGWHSAAILES 1341
Query: 120 GKIHGWGYNSYGQA--ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
GKI WG N YGQ + KS A + G+VR G H+ V+ A
Sbjct: 1342 GKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVA 1394
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G G+LG+ QS + + +P V A + +K A G HT L++ G + + G
Sbjct: 92 VFMWGDGENGKLGN---QSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148
Query: 65 GCQAGQLGLGPQTRSFSFI---PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
GQLG+G S S P++ + + I+ N + +A G+ H+L GK
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGK 208
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLT 168
I WG S+G+ A P V +V +A G H+A +T
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAIT 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
IYTWG G G+LGH +G P+ + + I +VACG H+ A + G +YAW
Sbjct: 1181 IYTWGCGVNGRLGH-GFHTGYST--PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAW 1237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKI 122
G GQLG +F + + + F P+L + L +ACG H + + ++
Sbjct: 1238 GAGDRGQLG---SLENFDCV--KINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQV 1292
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLTDA 170
WG +GQ + + P V G K+ GG HSA + ++
Sbjct: 1293 LSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILES 1341
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G GQLG L + P+ V ALDG + CGG H+ A+ G + WG
Sbjct: 1292 VLSWGAGEFGQLG---LDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWG 1348
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T+S S + Y R + V+ G +HTLV M K+
Sbjct: 1349 KNVYGQLGHG-DTKSCS--APRVNQYLR------LEGKVRTAGLGANHTLVVMVANKVFA 1399
Query: 125 WGYNSYGQAA--NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G N GQ + T P ++ G+ + ++AAG HS L+
Sbjct: 1400 MGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALS 1446
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG LQ+ L + ++A I ++ + +T G+LY G
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAARSPSLMQSLLATS---IVHISANSDMSAFVTDSGSLYVSG 1668
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G + G+LGLG P + R++ + + VACG H L + +++
Sbjct: 1669 GSEHGRLGLG------HMAPAPTPVEIRSLNTV----KIMKVACGTYHCLALTEEKRVYA 1718
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG +G A + P + + + AGG HSA L+
Sbjct: 1719 WGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALS 1763
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++TWG G GQLGH S++ +E PR +L + + CG HT + G LY+
Sbjct: 260 DVWTWGKGLRGQLGHKSVK---EEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSM 316
Query: 64 GGCQAGQLGLGPQT 77
G GQLGLG T
Sbjct: 317 GANTHGQLGLGDAT 330
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ G GQLG K + P + L+G I VA G H+ AL+ G +++WG
Sbjct: 1397 VFAMGSNIDGQLGLDDPSRTGKNV-PVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWG 1455
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGK 121
G GQ LG +T + P P+L +P V+ +ACG++ + G+
Sbjct: 1456 GSPFGQ--LGHETITDKLAPT---------PLLERHKIPPDVKSIACGYTFSAAMSAKGE 1504
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 176
+ WG G+ + + PS + EV ++A G H A + +K +
Sbjct: 1505 VFTWGNGESGELGHAPKVLTYAPSLIK-DFSEVVQIACGFKHMAGIVFKPRMKTI 1558
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G QLGH +S E PR V I + DV+ G H AL G Y+WG
Sbjct: 741 LFTWGKGDEYQLGH---ESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWG 797
Query: 65 GCQAGQLGLG 74
AGQLG G
Sbjct: 798 NGSAGQLGHG 807
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 4 DIYTWGLGSVGQLGHCSL--QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG GQLGH ++ + LL R + D +K +ACG + A+++KG ++
Sbjct: 1450 EVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPD---VKSIACGYTFSAAMSAKGEVF 1506
Query: 62 AWGGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
WG ++G+LG P+ ++ S I + S+ V +ACG H
Sbjct: 1507 TWGNGESGELGHAPKVLTYAPSLIKDFSE--------------VVQIACGFKH 1545
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 1 MHLDIYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
MH + WG + GQLG H S D P + +L I+ +ACGG HT T+ G
Sbjct: 625 MH-KFFVWGSNTFGQLGIPHISSYMPD----PYEITSLREANIRSIACGGWHTLISTNTG 679
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++ + G GQLG G S + + +++ YF+ I + + V+ G +
Sbjct: 680 SVMSCGKGWHGQLGHG-DYESLTAL-SKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITN 737
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G++ WG Q +E S YP V++ ++R + G S +L
Sbjct: 738 KGRLFTWGKGDEYQLGHESSKNEAYPREVEF-FAKIRVVDVSIGDSHML 785
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G G G + + + L P+ + +L I V GG H+ AL+ G L+ WG
Sbjct: 1716 VYAWGDGKWGNAG---VSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWG 1772
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR--DGKI 122
GQLGLG + + +S T N+ +V+ V+ G +H+ V M+ +
Sbjct: 1773 KNSNGQLGLGTTSAA-----EDSPTKISNLDGVVMD-----VSLGANHSAVLMQVTSPNL 1822
Query: 123 HGWGYNSYGQ 132
G N+ GQ
Sbjct: 1823 FTCGLNANGQ 1832
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 11/144 (7%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P + +L+ + I VACG H ALT + +YAWG + G G + N +D
Sbjct: 1686 PVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAG----------VSNTNDV 1735
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW-YPSPVD 148
+ + V G H+ + G + WG NS GQ ++ A P+ +
Sbjct: 1736 LEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKIS 1795
Query: 149 WCVGEVRKLAAGGGHSAVLTDACS 172
G V ++ G HSAVL S
Sbjct: 1796 NLDGVVMDVSLGANHSAVLMQVTS 1819
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQS--GDKELLPRRVVALDGI---FIKDVACGGVHTCALTSKGA 59
+ + G G GQLGH +S + LP ++G FI V+ G + A+T+KG
Sbjct: 681 VMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGR 740
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
L+ WG + + LG ++ P E + +F I ++ V + G SH L
Sbjct: 741 LFTWG--KGDEYQLGHESSKNEAYPREVE-FFAKIRVVDV-------SIGDSHMLALDYS 790
Query: 120 GKIHGWGYNSYGQAAN-EKSTYAWYPSPVDWC 150
G + WG S GQ + E P P+ C
Sbjct: 791 GLPYSWGNGSAGQLGHGEMCERETLPRPIMLC 822
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T GL + GQLG D+ L V ALD I +CG HT A++ G L W
Sbjct: 1821 NLFTCGLNANGQLGLGDFV--DRSTLTA-VDALDDRQIVSASCGAAHTAAVSQYGDLITW 1877
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL P + +P + V++V CG T+V G+++
Sbjct: 1878 GNGRNGQLGLKAGLSKDIENPVQ-------LPAICNDPMVKVV-CGQEVTIVVSEKGELY 1929
Query: 124 GWGYNS 129
GY S
Sbjct: 1930 MAGYES 1935
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL--TSKGALY 61
D++ WG S GQLG + + + P ++ LDG+ + DV+ G H+ L + L+
Sbjct: 1767 DLFMWGKNSNGQLGLGTTSAAEDS--PTKISNLDGV-VMDVSLGANHSAVLMQVTSPNLF 1823
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRD 119
G GQLGLG F+ + T + + Q+V+ CG +HT +
Sbjct: 1824 TCGLNANGQLGLG------DFVDRSTLTAVDAL------DDRQIVSASCGAAHTAAVSQY 1871
Query: 120 GKIHGWGYNSYGQ 132
G + WG GQ
Sbjct: 1872 GDLITWGNGRNGQ 1884
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3329 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3386 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3435
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3436 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3484
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 832 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 888
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 889 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 936
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 937 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 987
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3380 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3494
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3495 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3554
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3555 TTVNRKPTLVHGLEGQKITRVACGSSHSVAWT 3586
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTW 4374
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4375 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4421
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4422 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4474
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4425 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4481
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4482 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4523
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4524 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4572
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + G + +ACG ++ A+T++
Sbjct: 776 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAE 830
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 831 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 877
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 878 TLAVTENGQVWSWGDGDYGK 897
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4477 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4534 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4575
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4344
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I V VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4345 ES-LRGIE-------VADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4396
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4397 EALQGHRVVDIACGSGDAQTL 4417
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 887 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 943
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 944 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 991
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 992 HSWGSNDQCQ 1001
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 3218 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3274
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3275 YACGEATNGRLGLGLSSGTVP-IPRQVTALSSYVVKKVA------VHSGGRHATALTVDG 3327
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3328 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3381
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 743 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 796
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 797 EEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 856
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 857 LVAGLKGLKVIDVACGSGDAQTL 879
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 4528 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 4581
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 4213 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4269 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4321
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4322 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDL 4371
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3012 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3069 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3118
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3119 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3167
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 517 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 573
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 574 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 621
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3063 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3177
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3178 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3237
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3238 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4060
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4061 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4107
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4108 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4111 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4168 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4209
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4210 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4258
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 461 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 515
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 516 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 562
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 563 TLAVTENGQVWSWGDGDYGK 582
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4163 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4220 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4261
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4030
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4031 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4082
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4083 EALQGHRVIDIACGSGDAQTL 4103
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 572 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 628
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 629 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 677 HSWGSNDQCQ 686
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2957
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 2958 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3010
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3011 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3064
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4214 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4261
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4262 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4289
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 481
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTL 564
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3899 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3954
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3955 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4007
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4057
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS GQLG + +P+++ L I V+CG H+ AL G +++WG
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSS--IPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG S S + +++ +G+ L VA G +H+ G
Sbjct: 168 KNNHGQLGLGENVPS-----QASPQWVKSL------DGIPLAQVAAGGAHSFALSFSGTS 216
Query: 123 HGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVLT 168
+GWG N+ GQ A +K + P + +GE+++L + G H+AVLT
Sbjct: 217 YGWGRNNAGQLALSGKKESAEQISKP--FSIGELKRLQVTYISCGDEHTAVLT 267
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G S GQLG Q + P ++ AL+ I V+CG H+ A+ +G +++WG
Sbjct: 58 VWSCGNNSCGQLGRKRCQKHGR---PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESD--TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG+ + + S IP + D + F+ I V+CGH H++ +DG++
Sbjct: 115 SGSDGQLGIR-EFKKLSSIPKKIDELSSFKIIQ----------VSCGHYHSIALAQDGRV 163
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N++GQ E P V G + ++AAGG HS L+
Sbjct: 164 FSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALS 211
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG ++ + P+ V +LDGI + VA GG H+ AL+ G Y WG
Sbjct: 163 VFSWGKNNHGQLGLG--ENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWG 220
Query: 65 GCQAGQLGLGPQTRSFSFIPNE-SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
AGQL L + S I S + + V ++CG HT V +DGK+
Sbjct: 221 RNNAGQLALSGKKESAEQISKPFSIGELKRL-------QVTYISCGDEHTAVLTQDGKVF 273
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEF 179
+G N GQ + + P VD V ++A G H+ L +C+ ++ F
Sbjct: 274 TFGSNDSGQLGRQLISGMKGPQVVDSAVS-FSQIACGSYHT--LAYSCTTGQVISF 326
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 6 YTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
Y WG S GQLG ++ ++ + + RR +L + ACG H+ L S G +++ G
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
GQLG + R I + + V+CG H+L ++G++
Sbjct: 63 NNSCGQLGR-----------KRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVF 111
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG S GQ E + P +D ++ +++ G HS L
Sbjct: 112 SWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIAL 157
>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
Length = 932
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL + G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQASPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPV 223
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGHG--REGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L + P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHGREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGTRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACG--GVHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S + P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LGLG ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGLG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4087
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4088 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4140 EALQGHRVIDIACGSGDAQTL 4160
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4319 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2706 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2762
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2763 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2812
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2813 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 2861
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 260 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 316
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 317 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 364
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 415
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH S D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3753
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 3754 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3800
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P+ +D G V K+ G S LT +
Sbjct: 3801 DDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKS 3853
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2757 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2871
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2872 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2931
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2932 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2963
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 204 EVYSWGCGDGGRLGH-----GDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAE 258
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 259 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 305
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 306 TLAVTENGQVWSWGDGDYGK 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3804 VWSWGDGDYGKLGR---GGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3860
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3861 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3902
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3903 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3951
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3856 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3913 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 3954
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G +RS P
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--SRSPCDRPRVI 3723
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3724 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3775
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3776 EALQGHRVVDIACGSGDAQTL 3796
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 315 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 371
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 372 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 419
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 420 HSWGSNDQCQ 429
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2595 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2651
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 2652 YACGEATNGRLGLGLSSGTVP-IPRQITALSSYMVKKVA------VHSGGRHATALTVDG 2704
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 2705 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 2758
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3592 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3647
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S S T +I + + V G H L +G+++
Sbjct: 3648 GYGAGGRLGIGGTESVS-----SPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3700
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3750
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA-----LTSKG 58
++YTWG GQLG + + + PR V AL G + VACG HT A TS G
Sbjct: 3907 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAG 3963
Query: 59 ALYA 62
L A
Sbjct: 3964 KLPA 3967
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 171 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 224
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 225 EEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 284
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 285 LVAGLKGLKVIDVACGSGDAQTL 307
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 1877 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ VQ VACG + TL +G +
Sbjct: 1934 LGEYGRLGHG---------DNTTQLRPKLVKVLLGHRVVQ-VACGSRDAQTLALTDEGMV 1983
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 1984 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2032
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G+ + D+A GG H+ +T+ G LY W
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITASGELYTW 2926
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + + V VACG + TL D
Sbjct: 2927 GKGRYGRLGHG----------DSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDM 2976
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 2977 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3026
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 1928 ELYSWGLGEYGRLGH-----GDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G++ WG N +GQ N
Sbjct: 2043 YFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT 2102
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2103 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 2977 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3033
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3034 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 3075
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 3076 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 3124
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3029 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3085
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 3086 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 3127
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T++G +
Sbjct: 1766 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKV 1822
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H + DG
Sbjct: 1823 YACGEATNGRLGLGLSSGTIP-IPRQISALSNYVVKKVA------VHSGGRHAMALTVDG 1875
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 1876 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1929
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G LY+WG + G+LG G ++ P +
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRS------PCDR 2892
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++V A G +H+ G+++ WG YG+ + S P
Sbjct: 2893 PRVIESL------RGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPK 2946
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 2947 LVEALQGHRVIDVACGSGDAQTL 2969
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
++YTWG GQLG + + + PR V AL G I VACG HT A
Sbjct: 3080 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 3126
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 2765 IYGWGHNHRGQLGGIE---GAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA-T 2820
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 2821 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIRKVA--VNSGGKHCLALSSEGELYS 2873
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T + L
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGEL 2923
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3238 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3297
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTW 4121
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 4122 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4168
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4169 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G + G+LG + SG + PR+V AL +K VA GG H ALT G +++
Sbjct: 3017 VYACGEATNGRLG-LGISSGTVPI-PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3074
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG FS + + + ++ +ACG SH+ G++
Sbjct: 3075 WGEGDDGKLG------HFSRMNCDKPRLIEALKT----KRIRDIACGSSHSAALTSSGEL 3124
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + +T P V +G V ++A G + LTD
Sbjct: 3125 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4172 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4228
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4229 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4270
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4271 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHT 4319
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + +P+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAVPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4224 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
GQLG G + R +P L V VACG +HTL +
Sbjct: 4281 DNDEGQLGDGT---------TNAIQRPRLVPALQ-GKKVNRVACGSAHTLAW 4322
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4087
Query: 88 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ G++L VA G +H+ G ++ WG YG+ + S P
Sbjct: 4088 PRVIESL------RGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK 4141
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4142 LVEALQGHRVVDVACGSGDAQTL 4164
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P L + + VA G A+T +G +YA G G+LGLG + + IP +
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVP-IPRQVT 3044
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ V V G H DGK+ WG G+ + P ++
Sbjct: 3045 ALSSYVVKKVA------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 149 WC-VGEVRKLAAGGGHSAVLTDACSL 173
+R +A G HSA LT + L
Sbjct: 3099 ALKTKRIRDIACGSSHSAALTSSGEL 3124
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQR---PRLVPALQGKKVNRVACGSAHT---------LAW 4322
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4323 STSKPASAGKLP-----TQVPMEYN-HLQEIPII 4350
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3960 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4015
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4016 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4068
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G E+ +AAGG HSA +T A L
Sbjct: 4069 WGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDL 4118
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 1682 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 1738
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 1739 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 1785
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 1835
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 1788 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 1844
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 1845 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 1892
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 1893 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 1578 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 1631
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 1632 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 1676
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 1677 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 1730
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 1632 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1688
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 1689 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 1738
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 1739 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 1782
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG ++GQLG Q+G + PR + +L GI + ++ GG H+ L+ G ++ W
Sbjct: 138 QLFVWGENALGQLGLRKEQAGTQS--PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GG AGQLGLG T F+P ++ R + ++CG HT + G +
Sbjct: 196 GGNSAGQLGLGDTTD--RFVPTVVNSLKR--------KKIVSISCGGEHTAALAKGGTVF 245
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G +GQ + +P V G +V ++ G H+ V T + L
Sbjct: 246 TFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKL 296
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRR------VVALDGIFIKDVACGGVHTCAL 54
+ L T L G+ G L G K L+ + + L+ + +ACG H+ AL
Sbjct: 74 LQLKKNTIRLIVCGEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMAL 133
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN---IPILVVPNGVQLVACGHS 111
T+ G L+ WG GQLGL + +S + ++ IP V ++ G +
Sbjct: 134 TNDGQLFVWGENALGQLGLRKEQAG-----TQSPRHLQSLCGIP-------VAQISAGGN 181
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVL 167
H+ V G + GWG NS GQ +T + P+ V+ ++ ++ GG H+A L
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAAL 238
>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G GQLGH + K P ++ +L I +DVACG H+ AL + G++Y +
Sbjct: 256 NLYSWGRGLQGQLGHGTSNDCSK---PNQISSLSSI--RDVACGEAHSMALQNNGSVYVF 310
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG D ++ P ++ +G +++ACG H+ V ++G +
Sbjct: 311 GSGQFGQLGLG-------------DYKQQDAPQMLQIHG-EMIACGRHHSAVLTKNGALF 356
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G N Q E Y +P+
Sbjct: 357 MFGNNESSQLGLECGKSGAYSTPL 380
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G+LG + K LP + +L + I +A G H A+ ++G LY+WG
Sbjct: 204 LFSWGSNEFGRLGQNAFAKCMK--LPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSWG 261
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + PN+ + + ++ VACG +H++ +G ++
Sbjct: 262 RGLQGQLGHG--TSNDCSKPNQISSL----------SSIRDVACGEAHSMALQNNGSVYV 309
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDACSL 173
+G +GQ Y +P + GE+ +A G HSAVLT +L
Sbjct: 310 FGSGQFGQLG--LGDYKQQDAPQMLQIHGEM--IACGRHHSAVLTKNGAL 355
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG + QLG + S +P ++ + + I D+ +T A+ +G L++WG
Sbjct: 151 IFVWGSNAYQQLGFDA--SEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWG 208
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
+ G+LG + +P+ PI + N + +A G H L G ++
Sbjct: 209 SNEFGRLGQNAFAKCMK-LPS---------PITSLGNLKIAKLALGTFHVLAIDTQGNLY 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG GQ + S P+ + + +R +A G HS L + S+
Sbjct: 259 SWGRGLQGQLGHGTSNDCSKPNQIS-SLSSIRDVACGEAHSMALQNNGSV 307
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG +VGQLG + P V G + VA G H+ ALTS G ++AWG
Sbjct: 117 VLAWGRNAVGQLGDGTTI---NRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWG 173
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
GQLG G +T R+ P+ V P+G + VA G H+L G
Sbjct: 174 DNSTGQLGDGTRTN-------------RSTPVAVSFPSGTVITAVAAGGMHSLALTSAGT 220
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLK 174
+ WG NS GQ + T P V VG V +A GG HS +T A + +
Sbjct: 221 VFAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNAR 274
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + P V G I VA GG+H+ ALTS G ++AWG
Sbjct: 169 VFAWGDNSTGQLGDGTRT---NRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWG 225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G +T N S +P+ + V +A G SH+L G
Sbjct: 226 DNSTGQLGDGTRT-------NRSTPVVVGLPVGTI---VTAIAGGGSHSLAVTSAGNARA 275
Query: 125 WGYNSYGQ 132
WG N GQ
Sbjct: 276 WGNNFVGQ 283
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + + +P V G + A G H+ A+TS G + AWG
Sbjct: 64 VLAWGDNYYGQLGDGTTN--NYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG 121
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
GQLG + T R+ P+ V +P G V VA G +H+L G
Sbjct: 122 RNAVGQLG-------------DGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGT 168
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDACSL 173
+ WG NS GQ + T P V + G V +AAGG HS LT A ++
Sbjct: 169 VFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTV 221
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 57/140 (40%), Gaps = 19/140 (13%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG VGQLG S + D + V G + VA G H+ ALTS G + +WG
Sbjct: 276 WGNNFVGQLGDGSNINRDASV---HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHG 124
GQLG + RN P V +P GV + VA G L G +
Sbjct: 333 WGQLG-------------DGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLA 379
Query: 125 WGYNSYGQAANEKSTYAWYP 144
WG N GQ + +T P
Sbjct: 380 WGGNIVGQLGDGTTTVRRTP 399
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLV 115
A+ AWG GQLG G + +R +PI V +P G ++ A G +H+L
Sbjct: 63 AVLAWGDNYYGQLGDG------------TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLA 110
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G + WG N+ GQ + + P V G V +AAG HS LT A ++
Sbjct: 111 VTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTV 169
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG + GQLG + + D+ P V G+ I VA G + ALTS G + AWG
Sbjct: 325 VLSWGSNNWGQLGDGTAR--DRNT-PGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWG 381
Query: 65 GCQAGQLGLGPQT 77
G GQLG G T
Sbjct: 382 GNIVGQLGDGTTT 394
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG + GQLG + +G LP + A G V G H+ ALTS G + AWG
Sbjct: 62 WGDNAFGQLGDGT-TTGSNTPLPVSLPA--GTDATAVVAGDFHSLALTSAGTVLAWGRND 118
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHG 124
+GQLG + T + P++V +P GV + VA G H+L G +
Sbjct: 119 SGQLG-------------DGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLA 165
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD---ACSLKELCEFR 180
WG NS+GQ + + + P V VG V +AAG GHS LT A + +
Sbjct: 166 WGSNSFGQLGDGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQ 225
Query: 181 LAESVTLSNASEI 193
L + T+S+++ +
Sbjct: 226 LGDGTTVSSSTPV 238
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + S ++ R V G+ + VA G H+ ALTS G + AWG
Sbjct: 111 VLAWGRNDSGQLGDGTTVSSSTPVVVRLPV---GVTVTAVAAGFGHSLALTSTGVVLAWG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
GQLG + T + P+ V +P GV + VA G H+L G
Sbjct: 168 SNSFGQLG-------------DGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSVGA 214
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG-HSAVLTDA 170
WG N GQ + + + P V VG AGG HS LT A
Sbjct: 215 ALAWGNNFSGQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSA 264
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + S + R V G+ + VA G H+ ALTS GA AWG
Sbjct: 163 VLAWGSNSFGQLGDGTTVSSSTPVAVRLPV---GVTVTAVAAGSGHSLALTSVGAALAWG 219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
+GQLG + T + P+ V +P G V VA G H+L G
Sbjct: 220 NNFSGQLG-------------DGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGA 266
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG N GQ + + + P V VG V LA G HS LT A
Sbjct: 267 ALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSA 316
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
G + +A G H+ ALTS GA AWG GQLG G T + S +P I +
Sbjct: 297 GTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDG--TNADSSVP---------IAVS 345
Query: 98 VVPNGVQLVACGH--SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EV 154
+ H +H L G WG N GQ + + + P V G +
Sbjct: 346 LPAGATITAIAAHDGAHNLAITSTGAALAWGGNGDGQLGDGTNADSSVPIAVSLPAGTTI 405
Query: 155 RKLAAGGGHSAVL 167
+AA HS L
Sbjct: 406 TAIAASVEHSLAL 418
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4039 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4095
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4096 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDG 4142
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4192
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4145 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4201
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4202 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4249
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4250 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3935 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 3988
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 3989 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4033
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4034 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4087
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 3989 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4046 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4095
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4096 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4139
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG+G G+LG + P + L GI ++ G HT AL + G L++WG
Sbjct: 106 VWTWGVGYSGELGDGT---NSLRTTPAPINGLTGI--TAISAGWNHTLALKADGTLWSWG 160
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
Q GQLG G T S NIP L VP G+ ++ G H+LV DG +
Sbjct: 161 QNQYGQLGTGNTTNS-------------NIP-LQVPGQIGITSISSGGGHSLVIKNDGTV 206
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL-TDACSLKELCEFR 180
WG N++GQ N ++ P + G + ++AG HS L +D C FR
Sbjct: 207 WSWGCNNFGQLGNGTNSNNPTPHQISGLNG-IINVSAGVIHSTALKSDGTVWNWGCNFR 264
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G LG + + + P +V L+GI ++ G H AL S G ++ WG
Sbjct: 56 VWSWGFNQNGHLGDGTTSNSNS---PVQVKGLNGI--TAISAGWAHFVALKSDGTVWTWG 110
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LG G T S P PI + G+ ++ G +HTL DG +
Sbjct: 111 VGYSGELGDG--TNSLRTTP---------APINGL-TGITAISAGWNHTLALKADGTLWS 158
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N YGQ +T + P V +G + +++GGGHS V+
Sbjct: 159 WGQNQYGQLGTGNTTNSNIPLQVPGQIG-ITSISSGGGHSLVI 200
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + + + +P +V GI ++ GG H+ + + G +++WG
Sbjct: 156 LWSWGQNQYGQLGTGNTTNSN---IPLQVPGQIGI--TSISSGGGHSLVIKNDGTVWSWG 210
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S + P++ + NG+ V+ G H+ DG +
Sbjct: 211 CNNFGQLGNG--TNSNNPTPHQ----------ISGLNGIINVSAGVIHSTALKSDGTVWN 258
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAC 171
WG N G+ AN ++ P + G + A SA+ +D
Sbjct: 259 WGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGT 305
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 47/168 (27%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG+ + P ++ L+GI +V+ G +H+ AL S G ++ WG
Sbjct: 206 VWSWGCNNFGQLGNGT---NSNNPTPHQISGLNGII--NVSAGVIHSTALKSDGTVWNWG 260
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---------------------------- 96
G+L G + S+ IP +++ I I
Sbjct: 261 CNFRGELANGNKIDSY--IPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLG 318
Query: 97 ------LVVP------NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ P +G+ + G ++T+ DG I +G N+YGQ
Sbjct: 319 NGSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGNIFAFGENTYGQ 366
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 2839 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKAKRIRDIACGSSHSAAITSSGELYSWG 2895
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 2896 LGEYGRLGHG---------DNTTQLRPKLVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2945
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2946 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 2994
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + P V AL G+ + DVACG T A+T G ++
Sbjct: 534 ELYTWGRGNYGRLGHGS---SEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 590
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ + D + V CG ++ +D
Sbjct: 591 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCGSQFSVALTKD 638
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + +P +D G +V +A G H LTD
Sbjct: 639 GQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 689
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2890 ELYSWGLGEYGRLGH-----GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3004
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3005 YFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3064
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3065 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3096
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G+ + D+A GG H+ +T+ G L+ W
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITASGELFTW 3920
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + + V VACG + TL D
Sbjct: 3921 GKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 3970
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 3971 VWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKS 4020
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L + I V CG + ALT G +Y WG
Sbjct: 589 VWSWGDGDYGKLGRGG---SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 645
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R +L G ++ VA G +H L DG++
Sbjct: 646 KGDNQRLGHG------------TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 693
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 694 HSWGSNDKLQ 703
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P + A +G + +ACG ++ A+T
Sbjct: 478 EVFSWGCGDGGRLGH-----GDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVD 532
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + + P+LV G+++ VACG +
Sbjct: 533 GELYTWGRGNYGRLGHG-------------SSEDQTTPMLVTALKGLKVVDVACGSGDAQ 579
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 580 TLAVTENGQVWSWGDGDYGK 599
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2728 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2784
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 2785 YACGEATNGRLGLGLSSGTIP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 2837
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ + +R +A G HSA +T + L
Sbjct: 2838 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGEL 2891
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 3886
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++V A G +H+ G++ WG YG+ + S P
Sbjct: 3887 PRVIESL------RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK 3940
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
VD G V +A G G + L
Sbjct: 3941 LVDALQGHRVIDVACGSGDAQTL 3963
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 47/186 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3971 VWSWGDGDYGKLGRGG---SDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWG 4027
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4028 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4069
Query: 117 MRDGKI-----------------HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158
DG+I + WG N GQ + + P V G ++ ++A
Sbjct: 4070 TEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVA 4129
Query: 159 AGGGHS 164
G H+
Sbjct: 4130 CGSAHT 4135
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-- 105
G H AL+S G +++WG G+LG G TY ++ NG Q
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHG------------DTTYLEEPTMIAAFNGKQAGK 514
Query: 106 ----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 160
+ACG +++ DG+++ WG +YG+ + S P V G +V +A G
Sbjct: 515 HVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACG 574
Query: 161 GGHSAVL 167
G + L
Sbjct: 575 SGDAQTL 581
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 36/132 (27%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL---- 60
+YTWG G +LGH S D PR+V L G + +A G +H T G +
Sbjct: 4023 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQ 4079
Query: 61 -------------YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQ 104
Y WG GQLG G T P LV +
Sbjct: 4080 WGLPRWSLGLGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKIN 4126
Query: 105 LVACGHSHTLVY 116
VACG +HTL +
Sbjct: 4127 RVACGSAHTLSW 4138
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3759 IYGWGHNHRGQLGGIE---GAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3814
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3815 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIRKVA--VNSGGKHCLALSSEGEVYS 3867
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG G+ + + P ++ G EV +AAGG HSA +T
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 3912
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
++YTWG GQLG + + + PR V AL G I VACG HT +
Sbjct: 4091 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLS 4137
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4095 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4151
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4152 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDG 4198
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4201 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4258 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4305
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4306 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3991 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4044
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4045 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4089
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4090 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4045 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4102 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4151
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4152 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4195
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|338531741|ref|YP_004665075.1| regulator of chromosome condensation [Myxococcus fulvus HW-1]
gi|337257837|gb|AEI63997.1| regulator of chromosome condensation [Myxococcus fulvus HW-1]
Length = 1497
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ D++ WG + GQ G S +G L P++V AL GI + +A G ++ AL G+L
Sbjct: 65 TNGDVWAWGQNAAGQAGIGS--TGGTVLQPQKVPALSGI--QAIAANGSYSLALGEDGSL 120
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+AWG +GQ+G G + S + + +P G++ +A G +H L +G
Sbjct: 121 WAWGQNSSGQVGTGSTSVSV-----HTPAQVQGLP------GIRAIAAGLNHVLALDTEG 169
Query: 121 KIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ GWG N+ GQ ST P+ V + VR +AAG GHS + +A
Sbjct: 170 RVWGWGANTSGQTGRGSTSTTVLSPTQVAG-LPPVRAIAAGAGHSLAVDEA 219
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG + GQLG S+ + + P +V+ L I H+ AL + G ++AW
Sbjct: 16 EVWSWGQNTAGQLGTGSVST-TPQSQPAQVIGLPAIKAIAAG--IAHSLALDTNGDVWAW 72
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQ G+G T P + +P L +G+Q +A S++L DG +
Sbjct: 73 GQNAAGQAGIG-STGGTVLQP-------QKVPAL---SGIQAIAANGSYSLALGEDGSLW 121
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS GQ ++ + + P+ V G +R +AAG H L
Sbjct: 122 AWGQNSSGQVGTGSTSVSVHTPAQVQGLPG-IRAIAAGLNHVLAL 165
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAW 63
++ WG + GQ G S + L P +V L ++ +A G H+ A+ G ++AW
Sbjct: 171 VWGWGANTSGQTGRGSTST--TVLSPTQVAGL--PPVRAIAAGAGHSLAVDEAFGNVWAW 226
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ G G + + P F V +A GH +L + +G
Sbjct: 227 GQNNFGQTGTGATSTTPVLNPTAVGGIFA----------VTDIAAGHFFSLAIVGEGHAV 276
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG+N +GQ N + + P V +G+ R +AAG H+ + C +
Sbjct: 277 AWGHNIFGQLGNGSTAASAIPVSVTG-LGDARAVAAGAQHALSIRPGCPV 325
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIF-IKDVACGGVHTCALTSKGALY 61
+++ WG + GQ G +G P A+ GIF + D+A G + A+ +G
Sbjct: 222 NVWAWGQNNFGQTG-----TGATSTTPVLNPTAVGGIFAVTDIAAGHFFSLAIVGEGHAV 276
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDG 120
AWG GQLG G S IP+ V G + VA G H L
Sbjct: 277 AWGHNIFGQLGNGSTAASA-------------IPVSVTGLGDARAVAAGAQHALSIRPGC 323
Query: 121 KIHGWGYNSYGQ 132
+ WG N GQ
Sbjct: 324 PVWSWGNNGQGQ 335
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G H+ L G +++WG AGQLG G S S P +P +
Sbjct: 1 MAAGAYHSLFLKKNGEVWSWGQNTAGQLGTG----SVSTTPQSQPAQVIGLPAIK----- 51
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
+A G +H+L +G + WG N+ GQA
Sbjct: 52 -AIAAGIAHSLALDTNGDVWAWGQNAAGQA 80
>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
1 [Vitis vinifera]
Length = 514
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
L + WGL G C L + +L P V AL G+ + +A G HT +++G +Y
Sbjct: 344 QLLTFGWGL-----HGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVY 398
Query: 62 AWGGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
A+GG Q GQLG G Q + + + S+ + ++V+CG H++V G
Sbjct: 399 AFGGNQFGQLGTGADQAETLPKLLDASNLENKR---------AKIVSCGARHSVVLTEGG 449
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+I WG+N YGQ PSPV +++ +A G H+ +L
Sbjct: 450 EIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLL 496
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 12 SVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAG 69
S Q S S D+ L P V G+ I +A GG HT AL+ G ++ WG G
Sbjct: 215 SAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEG 274
Query: 70 QLGLGPQTRSFS---FIP-NESDTYFRNIPILV-------------VPNG-VQLVACGHS 111
QLGLG +T+ S IP Y ++ P LV VP V+ +ACG
Sbjct: 275 QLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGR 334
Query: 112 HTLVYMRDGKIHGWGYNSYGQ 132
H+ V G++ +G+ +GQ
Sbjct: 335 HSAVITDAGQLLTFGWGLHGQ 355
>gi|301100760|ref|XP_002899469.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103777|gb|EEY61829.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 995
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 5 IYTWGLGSVGQLG--------------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 50
++ WG S GQLG S + + + +V AL + ++ VACG +H
Sbjct: 266 VFCWGSNSHGQLGIIPSSFNKPADAPAKPSPTTFPRSAVMHQVAALRSVSVRQVACGVLH 325
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI--PNESDTYFRNIPILVVPNGVQLVAC 108
+ ALTS G +++WG G+LG G T+ S I P + N+ L + G AC
Sbjct: 326 SLALTSDGQVFSWGCSDGGRLGQGQDTKRSSDIREPALVNGILANLVTLTIACGAWQSAC 385
Query: 109 -GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV------RKLAAGG 161
+ V G+++ WG YGQ K+ A+ P PV E+ +LA G
Sbjct: 386 IAAEASQVTSGAGRVYTWGTGVYGQLGVGKAQVAYEPQPVRVPPRELDDEVFATRLACGT 445
Query: 162 GHSAVLT 168
H+AVLT
Sbjct: 446 HHTAVLT 452
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---DGIFIKDVACGGVHTCALTSKGALY 61
+YTWG G GQLG Q E P RV D +F +ACG HT LT ++
Sbjct: 400 VYTWGTGVYGQLGVGKAQVA-YEPQPVRVPPRELDDEVFATRLACGTHHTAVLTVDNRIF 458
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNE 86
WG TR+F+ +P E
Sbjct: 459 TWGS-----------TRAFNGVPAE 472
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSK----- 57
++++WG + G LG + + VV AL A GG H+ A+
Sbjct: 204 ELFSWGDNAHGALGFPAENAAQVARNRATVVGALSNYQAVAAAVGGHHSIAVCDHVAGHD 263
Query: 58 GALYAWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPIL-----VVPNGVQLVACGH 110
G ++ WG GQLG+ P + + S T F ++ + V+ VACG
Sbjct: 264 GVVFCWGSNSHGQLGIIPSSFNKPADAPAKPSPTTFPRSAVMHQVAALRSVSVRQVACGV 323
Query: 111 SHTLVYMRDGKIHGWG 126
H+L DG++ WG
Sbjct: 324 LHSLALTSDGQVFSWG 339
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 31/141 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK----DVACGGVHTCALTSK-- 57
+++WG G+LG ++ R ++GI +ACG + + ++
Sbjct: 334 QVFSWGCSDGGRLGQGQDTKRSSDI--REPALVNGILANLVTLTIACGAWQSACIAAEAS 391
Query: 58 ------GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ------L 105
G +Y WG GQLG+G ++ + P+ V P +
Sbjct: 392 QVTSGAGRVYTWGTGVYGQLGVG-----------KAQVAYEPQPVRVPPRELDDEVFATR 440
Query: 106 VACGHSHTLVYMRDGKIHGWG 126
+ACG HT V D +I WG
Sbjct: 441 LACGTHHTAVLTVDNRIFTWG 461
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 661 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 717
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 718 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 767
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 768 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 816
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 712 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 826
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 827 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 886
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 887 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 918
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1708
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 1709 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 1755
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 1756 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 1808
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 1759 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 1815
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 1816 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 1857
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 1858 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 1906
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 1811 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 1868 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 1909
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 1678
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 1679 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 1730
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 1731 EALQGHRVVDIACGSGDAQTL 1751
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 550 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 606
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 607 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 659
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 660 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 713
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 1862 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 1909
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P +P E + + + IPI+
Sbjct: 1910 STSKPASAGKLPAQ-----VPMEYN-HLQEIPII 1937
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 1547 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 1602
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 1603 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 1655
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 1656 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 1705
>gi|407838156|gb|EKF99968.1| hypothetical protein TCSYLVIO_009110 [Trypanosoma cruzi]
Length = 644
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 16/119 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG+G G+LGH GDKE L+P +V AL G + DVACG HT ALT +GA+
Sbjct: 395 ELFTWGVGYQGRLGH-----GDKEPALVPTKVRGALTGQHVIDVACGSFHTVALTERGAV 449
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMR 118
Y WG +GQ G + + + +R + + V GV + ++CG HT+V M+
Sbjct: 450 YCWGDNASGQCGAKSTIDAVT-------SPYRVVNLEFVAGGVAKAISCGRQHTVVVMQ 501
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G+ G+LG L + + G+ + DVA G ++ AL+ G +Y +G
Sbjct: 150 LYSWGSGASGELGTQRFLDCSTPTLAQ--ITPFGVRVVDVALGANYSSALSEDGNIYTFG 207
Query: 65 GCQAGQLGLGPQTRSFSFIPNESD---TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
GQLGLG R P++ T + IP+ V L A G++ +
Sbjct: 208 NGDWGQLGLG-SARELDEHPDDKSAVVTVPQRIPLFEQNPAVHL-AAGYAFAMALTAGHH 265
Query: 122 IHGWGYNSYGQA 133
++ WG N++GQ+
Sbjct: 266 VYFWGNNNHGQS 277
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--------LLPRRVVALDGIFIKDVACGGVHTCALT 55
+IYT+G G GQLG S + D+ +P+R+ + +A G ALT
Sbjct: 202 NIYTFGNGDWGQLGLGSARELDEHPDDKSAVVTVPQRIPLFEQNPAVHLAAGYAFAMALT 261
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ +Y WG GQ GLGP+ +S E T + L VQL CG +L
Sbjct: 262 AGHHVYFWGNNNHGQSGLGPRYFDYSLRKVEEPTL---VDTLEGKRIVQL-GCGSFFSLA 317
Query: 116 YMRDGKIHGWG 126
DG ++ WG
Sbjct: 318 LGDDGTLYSWG 328
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG + GQ G SL+ ++ P V L+G I + CG + AL G
Sbjct: 266 VYFWGNNNHGQSGLGPRYFDYSLRKVEE---PTLVDTLEGKRIVQLGCGSFFSLALGDDG 322
Query: 59 ALYAWGGCQAGQLGLGPQTRSF---SFIPNES-----DTYFRNIPILVVPNGVQL--VAC 108
LY+WG + LG + R+ FI ES T ++ VP +L V
Sbjct: 323 TLYSWGLLECLGLGTTEEVRAAIDDPFIITESLSTEKRTVVLVPQVVHVPTEHKLIRVHA 382
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAV 166
G H+ V G++ WG G+ + A P+ V + V +A G H+
Sbjct: 383 GQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQHVIDVACGSFHTVA 442
Query: 167 LTD 169
LT+
Sbjct: 443 LTE 445
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V G H+ + + G L+ WG G+LG G + + +P + + + V
Sbjct: 380 VHAGQWHSGVINTAGELFTWGVGYQGRLGHG--DKEPALVPTK-------VRGALTGQHV 430
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP-----VDWCVGEVRK-L 157
VACG HT+ G ++ WG N+ GQ KST SP +++ G V K +
Sbjct: 431 IDVACGSFHTVALTERGAVYCWGDNASGQCG-AKSTIDAVTSPYRVVNLEFVAGGVAKAI 489
Query: 158 AAGGGHSAVL 167
+ G H+ V+
Sbjct: 490 SCGRQHTVVV 499
>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 577
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 6 YTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
TWG GQLG+ + S D P V G + D+A GG H+ ALTS G+L AWG
Sbjct: 59 LTWGQNDRGQLGNGTTTNSTD----PVEVSLPAGTLLTDIAGGGKHSLALTSTGSLLAWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGK 121
GQLG G T S N P+ V +P G ++V A G+ H+L G
Sbjct: 115 NNANGQLGDGTTTSS-------------NTPVAVDLPAGTEVVAIAAGNDHSLALTSTGA 161
Query: 122 IHGWGYNSYGQ 132
+ WG NS GQ
Sbjct: 162 VLAWGDNSSGQ 172
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + D P V +A G VH+ +LTS G+ +AWG
Sbjct: 162 VLAWGDNSSGQLGDGT---NDDRSTPVTVDLPTTSTTTAIAAGSVHSLSLTSTGSAFAWG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
GQLG + T N P+ V + +A G +H+L D
Sbjct: 219 NNDEGQLG-------------DESTTSTNKPVNVALTTGTTLTAIAGGSAHSLGITSDNT 265
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG NS GQ + +T A P V G V +AAG HS L
Sbjct: 266 AVAWGSNSQGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSVAL 312
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 20/136 (14%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG + L P V G + +A G +H+ AL + G WG
Sbjct: 269 WGSNSQGQLGDGT---NTNALAPVNVALTTGTTVTAIAAGLLHSVALLTNGTAATWGNNA 325
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACG---HSHTLVYMRDGKIH 123
GQLG G + N P+ V +P+G L A +HT+
Sbjct: 326 TGQLGNG-------------NNVTSNTPVEVSLPSGTTLTAIAANSSNHTVAITNTETAL 372
Query: 124 GWGYNSYGQAANEKST 139
WG NS+GQ E +T
Sbjct: 373 AWGDNSFGQLGTEVTT 388
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 1713 EVFSWGDGDYGKLGH---GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 1769
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 1770 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 1816
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 1866
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 1819 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 1875
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 1876 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 1923
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 1924 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 1970
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 1609 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 1662
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 1663 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 1707
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 1708 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 1761
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 1663 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1719
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 1720 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 1769
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 1770 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 1813
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3072 IFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + D+A GG H+ +T+ G L+ W
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4170
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D V K+ G S LT +
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKS 4220
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L + + V CG + ALT GA+Y WG
Sbjct: 4171 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4228 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4269
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4270 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4223 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4280 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4321
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3018 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3070
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
KI WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + ALT G +Y WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4090
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G + WG YG+ + S P V
Sbjct: 4091 ES-LRGIEVVD-------IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4143 EALQGYRVIDIACGSGDAQTL 4163
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4322 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4349
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3959 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4014
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4015 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4067
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ V +L I +A G H AL++ G +++WG G+LG G +P E
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEE 538
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ V +ACG +++ +G+++ WG +YG+ + S P V
Sbjct: 539 PKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
G +V ++ G G + L
Sbjct: 599 TGLKGLKVIDVSCGSGDAQTL 619
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3048 IFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3104
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3105 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3154
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3155 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3203
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 548 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 604
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 605 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKD 652
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 653 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 703
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3099 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3213
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3214 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3273
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3274 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + D+A GG H+ +T+ G L+ W
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4096
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4097 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4146
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4147 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4196
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 492 EVFSWGCGDGGRLGH-----GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 546
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 547 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 593
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 594 TLAVTENGQVWSWGDGDYGK 613
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4147 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4203
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4204 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4245
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4246 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4294
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4199 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4256 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4297
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2937 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2993
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 2994 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3046
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
KI WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3047 KIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3100
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + ALT G +Y WG
Sbjct: 603 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 659
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 660 KGDNQRLGHG------------TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 707
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 708 HSWGSNDQCQ 717
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4009 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4066
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G + WG YG+ + S P V
Sbjct: 4067 ES-LRGIEVVD-------IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLV 4118
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4119 EALQGYRVIDIACGSGDAQTL 4139
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4250 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4297
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4298 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4325
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3935 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3990
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3991 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4043
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4044 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4093
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ V +L I +A G H AL++ G +++WG G+LG G +P E
Sbjct: 461 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEE 514
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ V +ACG +++ +G+++ WG +YG+ + S P V
Sbjct: 515 PKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 574
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
G +V ++ G G + L
Sbjct: 575 TGLKGLKVIDVSCGSGDAQTL 595
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I +WG GQ+GH + D LP+ + L + +ACG H+ ALTS G LY+WG
Sbjct: 107 ILSWGDNDCGQVGHST--DNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+ +S +P+ S+ R IL +P + +ACG +H+ + + + G
Sbjct: 165 SNIYGQLGV----QSPKDLPH-SNAPLRLTTILGIP--LATIACGGNHSFLISKSSAVFG 217
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLTD 169
WG N+ GQ YPS + +G VR + G +S LT+
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ + GI + +ACGG H+ ++ A++ W
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGW 218
Query: 64 GGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL Q R++ P++ + R + GV+ V CG +++ +G +
Sbjct: 219 GKNTCGQLGLNDEQNRAY---PSQLKS-MRTL-------GVRFVTCGDEYSVFLTNEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S P V +G + ++A G H+ L +
Sbjct: 268 FTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPS 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y WG S GQLG +++ ++ LLP ++ ++ +ACG HT LT+ G +YA
Sbjct: 1 MALYCWGDASHGQLGLGGIEN-EQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGK 121
G QLG T+ R +PI + V + +ACG H++ G+
Sbjct: 60 CGNNDHHQLGHELPTK-------------RPLPIPELQAYVVIQIACGSRHSMALTEWGQ 106
Query: 122 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
I WG N GQ + P + + V V ++A G HS LT
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH + K LP + L + +ACG H+ ALT G + +WG
Sbjct: 57 VYACGNNDHHQLGH---ELPTKRPLP--IPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGK 121
GQ+G + +D +P + +V V +ACG++H+L G+
Sbjct: 112 DNDCGQVG------------HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGE 159
Query: 122 IHGWGYNSYGQAANEKST---YAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG N YGQ + ++ P + +G + +A GG HS +++ + ++
Sbjct: 160 LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAV 215
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH + + E++PR V+ L G I VACG HT AL S G +Y++
Sbjct: 267 VFTCGAGNYGQLGHGA---SNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSF 323
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 324 GLGASGQLG 332
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYM 117
ALY WG GQLGLG +P++ I P+ VQ +ACGH HTL
Sbjct: 2 ALYCWGDASHGQLGLGGIENEQILLPSQ---------IEFKPDSPVQQIACGHRHTLFLT 52
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+G+++ G N + Q +E T P P + V ++A G HS LT+
Sbjct: 53 ANGQVYACGNNDHHQLGHELPTKRPLPIP-ELQAYVVIQIACGSRHSMALTE 103
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 1373 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 1429
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ VQ VACG + TL +G +
Sbjct: 1430 LGEYGRLGHGDTTTQLK---------PKMVKVLLGHRVVQ-VACGSRDAQTLALTDEGLV 1479
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 1480 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 1528
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH S D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 2423
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 2424 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTD 2470
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V ++ G S LT A
Sbjct: 2471 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKA 2523
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 48/210 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWGLG G+LGH + +L P+ V L G + VACG T ALT +G ++
Sbjct: 1424 ELYTWGLGEYGRLGHGDTTT---QLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVF 1480
Query: 62 AWGGCQAGQLGLG-------PQT---------------RSFSFIPNE------------- 86
+WG G+LG G PQ FS +
Sbjct: 1481 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 1540
Query: 87 -----SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
SD + R ++ G ++ VA G H L G+++ WG N +GQ N +T
Sbjct: 1541 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 1600
Query: 140 YAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
P+ V G+ + ++A G HS T
Sbjct: 1601 VNRKPTLVQGLEGQKITRVACGSSHSVAWT 1630
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G + G+LG L SG L PR+V AL +K VA GG H ALT G +++
Sbjct: 1318 VYACGEATNGRLG-LGLSSGTVPL-PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 1375
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG FS + + + ++ +ACG SH+ G++
Sbjct: 1376 WGEGDDGKLG------HFSRMNCDKPRLIEALKT----KRIRDIACGSSHSAALTSSGEL 1425
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + +T P V +G V ++A G + LTD
Sbjct: 1426 YTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTD 1475
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 2474 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWG 2530
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 2531 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKAIAIATGSLHCVCC 2572
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 2573 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 2621
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G +A G +H T G +Y WG
Sbjct: 2526 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWG 2582
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 2583 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 2624
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G +RS P
Sbjct: 2336 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--SRSPCDRPRVI 2393
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 2394 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 2445
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 2446 EALQGHRVVGIACGSGDAQTL 2466
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 2577 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPA 2630
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 2262 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 2317
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 2318 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 2370
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 2371 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2420
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P L + + VA G A+T +G +YA G G+LGLG + + +P +
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVP-LPRQVT 1345
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ V V G H DGK+ WG G+ + P ++
Sbjct: 1346 ALSSYVVKKVA------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 1399
Query: 149 WC-VGEVRKLAAGGGHSAVLTDACSL 173
+R +A G HSA LT + L
Sbjct: 1400 ALKTKRIRDIACGSSHSAALTSSGEL 1425
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V+CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVSCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ GE V + AG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTE 727
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + D+A GG H+ +T+ G LY W
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 4120
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4170
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKS 4220
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYSWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVSWT 3329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4171 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4228 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4269
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4270 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4223 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4280 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4321
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3018 YACGEATNGRLGLGLSSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3070
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4090
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G ++ WG YG+ + S P V
Sbjct: 4091 ES-LRGIEVVD-------IAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLV 4142
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4143 EALQGYRVIDIACGSGDAQTL 4163
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V+CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ V G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
+ WG N Q
Sbjct: 732 YSWGSNDQCQ 741
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4322 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4349
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3959 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4014
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4015 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4067
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 17 GHCSLQSGDKELL-PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGL 73
G Q+ + ++L P+ V +L I +A G H AL + G +++WG G+LG
Sbjct: 471 GRVYTQAYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGH 530
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
G +P E + V +ACG +++ +G+++ WG +YG+
Sbjct: 531 G------DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRL 584
Query: 134 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ S P V G +V ++ G G + L
Sbjct: 585 GHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
>gi|402869940|ref|XP_003899001.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Papio
anubis]
Length = 944
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG S G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRSAPRGE---LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDT------------YFRNIPILVVPN----------- 101
GQLG+G + + SF P + T ++ ++ + V +
Sbjct: 101 AGSEGQLGIG-EFKEISFTPTKITTLNGIKIIQVSCGHYHSLALSKVQSNKPLSIGALKN 159
Query: 102 -GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
GV ++CG HT V ++DGK+ +G NS GQ + P V+ G V ++ G
Sbjct: 160 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCG 219
Query: 161 GGHS 164
H+
Sbjct: 220 SYHT 223
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PR+V L +ACG + + A+ G +Y
Sbjct: 173 EVFAWGYNNSGQVGSGSTAN---QPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYV 229
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R V + CG++HTLV +G +
Sbjct: 230 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VHKIVCGYAHTLVLTDEGHL 279
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 280 YAWGANSYGQLGTGNKSNQSYPTPVS--VEKDRVIEIAACHSA 320
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI + + CG HT LT +G LYAW
Sbjct: 226 EVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAW 282
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGK 121
G GQLG G N+S+ + P+ V + V ++ AC +HT + G
Sbjct: 283 GANSYGQLGTG----------NKSNQSYPT-PVSVEKDRVIEIAACHSAHTSAAKTQSGH 331
Query: 122 IHGWG 126
I+ WG
Sbjct: 332 IYMWG 336
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVAC----GGVHTCALTSK 57
+++ G G LG +GD + PRRV L G K +AC G H T +
Sbjct: 67 EVFVLGTNCSGCLG-----TGDILHSIEPRRVDHLCG---KKIACLSYGSGPHVVIATDE 118
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G +Y WG QLG G T + +P T N ++ V ACG H+LV
Sbjct: 119 GEVYTWGHNAYNQLGNG--TTNHGLVPTHISTNLGNRKVIEV-------ACGSHHSLVLT 169
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
DG++ WGYN+ GQ + + P V C+
Sbjct: 170 SDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCL 203
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG S GQLG +G+K + P V I+ AC HT A T G +Y
Sbjct: 279 LYAWGANSYGQLG-----TGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIY 333
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ + L P FS
Sbjct: 334 MWGQCRGQSVTL-PHLTHFS 352
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+ T+G+ GQLG L + P+ V L + VACG HT A+ G +Y++
Sbjct: 3295 DLLTFGMNDSGQLG---LDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSF 3351
Query: 64 GGCQAGQLGL----GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G + GQLGL + IP T P+L N V CG+ HT+ +
Sbjct: 3352 GKNEYGQLGLSHTQNTKVPMLVKIPPAPRT-----PMLDAVNKAVQVYCGYYHTVTILEC 3406
Query: 120 GKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GK+ WG N YGQ + KS + P P+ V++ + G H+ +L
Sbjct: 3407 GKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPL---TSRVKRASCGCYHTLLL 3455
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T G GQLG L + +P +VV L + VACG H A+TS G Y++
Sbjct: 561 EVFTCGKNDHGQLG---LGHNKQVKVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSF 616
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLV--ACGHSHTLVYMRDG 120
G GQLG+G + +NIPI L + + ++V ACG HTL+ G
Sbjct: 617 GRNDYGQLGIGSKIH-------------QNIPIALTISSNTRMVHAACGCYHTLLMSDSG 663
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ +G N+ GQ N +T + P P+
Sbjct: 664 QVFVFGRNNKGQLGNRGNTDSLLPVPL 690
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVAC--GGVHTCALTSKGALY 61
++T GL GQ C + + D+ L+ P + AL GI I VA G H A++ GA+Y
Sbjct: 3187 VFTCGLNKSGQ---CGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVY 3243
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG GQLGLG T S S P R I L + A + H+ V +G
Sbjct: 3244 SWGYNDRGQLGLG-TTVSKSHTP-------RVIESLREKYFITFAAVSYHHSAVVSNNGD 3295
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ +G N GQ + + + P V+ + V ++A G H+ + D
Sbjct: 3296 LLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD 3344
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G+ GQLG L + P+ V AL G + V+CG H T G ++
Sbjct: 509 ELYTFGMNDCGQLG---LDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTC 565
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKI 122
G GQLGLG + +P + +V+PN V VACG+ H G
Sbjct: 566 GKNDHGQLGLGHNKQ--VKVPTQ----------VVLPNELVCFVACGYYHATAITSTGLT 613
Query: 123 HGWGYNSYGQ 132
+ +G N YGQ
Sbjct: 614 YSFGRNDYGQ 623
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPR-----RVVALDGIFIK-DVACGGVHTCALTSK 57
D+Y++G GQLG Q+ +L + R LD + V CG HT +
Sbjct: 3347 DVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILEC 3406
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G + WG GQLG+G + ++S F +P+ + V+ +CG HTL+ +
Sbjct: 3407 GKVVTWGRNDYGQLGIGSKE-------HKSIAQFVPLPLT---SRVKRASCGCYHTLLLL 3456
Query: 118 RDGKIHGWGYNSYGQ 132
+G+ +G N+ GQ
Sbjct: 3457 VNGRPMVFGRNNKGQ 3471
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 4 DIYTWGLGSVGQL--GHCSLQSGDKELLPRRVVALDGIF----IKDVACGGVHTCALTSK 57
+I++ G + G+L GHC+ P + F I+ +A G L
Sbjct: 3134 EIFSCGQNNYGELCLGHCN---------PTNKLERASFFSYKSIQSIAGGNEVLVVLMKD 3184
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVY 116
GA++ G ++GQ G+G +P+ IP L +P + + G H L
Sbjct: 3185 GAVFTCGLNKSGQCGIGNFDERL-IVPSP-------IPALSGIPITMVAASNGCEHMLAI 3236
Query: 117 MRDGKIHGWGYNSYGQ 132
DG ++ WGYN GQ
Sbjct: 3237 SHDGAVYSWGYNDRGQ 3252
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGALYA 62
+ T GL GQ GH + ++ +L R + AL +K + + G H A+T G Y+
Sbjct: 402 VLTCGLNKSGQCGHGNFD--ERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYS 459
Query: 63 WGGCQAGQLG---LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
WG GQLG +G + Y + + ++ A + H+ +
Sbjct: 460 WGYNDRGQLGHENVG------------TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVS 507
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G+++ +G N GQ + + + P V +G + + G + VL
Sbjct: 508 GELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL 555
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG Q P V LD + + D+A GG H+ ALT KG +Y WG
Sbjct: 217 LLAWGNNEYGQLGTGDTQPTSH---PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LGLG +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGLGDNDKSSKMVPQKVN--------LLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 80/209 (38%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E +P RV AL + I A GG H A+ +G YAWG
Sbjct: 59 MFTWGWNQRGTLGHQP--ETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLG-------LGPQTRSFSFIPNE------------------------------- 86
G + GQ G +G R IP
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D ++P+ V V+L+A G H L DG++ WG N YGQ +
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPT 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+P PV + +AAGG HS LTD
Sbjct: 237 SHPVPVQGLDDLTLVDIAAGGWHSTALTD 265
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG G GQLG + + +++ V AL+ ++ V G ++ A+ G ++ WG
Sbjct: 7 IIAWGSGEDGQLG---IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ + IP+ N+ I A G H L G+ +
Sbjct: 64 WNQRGTLGHQPETKTEN-IPSRVKA-LANVKIT-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEK-STYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 29/131 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG G G+LG L DK +++P++V L I V+CGG H+ ALT G ++
Sbjct: 268 EVYGWGRGEHGRLG---LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIF 324
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN---------------GVQLV 106
++G G+LG G + + + +PI + P + +
Sbjct: 325 SFGRGDHGRLGYGRKVTTGQPL---------ELPIKIPPPEGSFNHTDEEEEGKWSAKSI 375
Query: 107 ACGHSHTLVYM 117
ACG HTL +
Sbjct: 376 ACGGRHTLAIV 386
>gi|270013420|gb|EFA09868.1| hypothetical protein TcasGA2_TC012016 [Tribolium castaneum]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 11/135 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++++G GS GQLGH L D E P+ + AL G+ I+ + GG H+CAL+ +G LY W
Sbjct: 158 NVFSFGRGSRGQLGHGCL---DDESEPKFIEALGGVKIEAIEAGGWHSCALSKEGDLYVW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLGLG S + +L ++ V CG+ HT+V +GK+
Sbjct: 215 GWNGSGQLGLGGSDDGVSIMATPQ--------VLDFDFNIKKVGCGNKHTVVLTDEGKLF 266
Query: 124 GWGYNSYGQAANEKS 138
G G+N Y Q N+++
Sbjct: 267 GCGWNKYKQLKNDEN 281
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ V CG HT ALT +G +YAW
Sbjct: 200 EVYAWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAW 256
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ V++ AC SHT + G++
Sbjct: 257 GANSYGQLGTG----------NKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQV 306
Query: 123 HGWG 126
+ WG
Sbjct: 307 YMWG 310
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + +PR+V + L + +ACG + + A+ G +YA
Sbjct: 147 EVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R V+ V CG++HTL +G +
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAHTLALTDEGVM 253
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + Y PV V + R + HS+
Sbjct: 254 YAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ G S G LG +GD + L PRR+ L G I ++ G G H +TS G +
Sbjct: 41 EVFVMGTNSSGCLG-----TGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEV 95
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+WG QLG G ++ S P + T N + V ACG H++V DG
Sbjct: 96 YSWGHNAYSQLGNGSTNQALS--PCQVSTNLINKKAISV-------ACGSHHSMVLTCDG 146
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
+++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD 197
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALY 61
+Y WG S GQLG +G+K + P +V+ ++ AC HT A S+ G +Y
Sbjct: 253 MYAWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVY 307
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 308 MWGQCR-GQSVITPHLTHFS 326
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P R+ AL GI ++ V CG HT ALT +G +YAW
Sbjct: 200 EVYAWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAW 256
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + I+ V++ AC SHT + G++
Sbjct: 257 GANSYGQLGTG----------NKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQV 306
Query: 123 HGWG 126
+ WG
Sbjct: 307 YMWG 310
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + +PR+V + L + +ACG + + A+ G +YA
Sbjct: 147 EVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYA 203
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R V+ V CG++HTL +G +
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAHTLALTDEGVM 253
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + Y PV V + R + HS+
Sbjct: 254 YAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ G S G LG +GD + + PRR+ L G I ++ G G H +TS G +
Sbjct: 41 EVFVMGTNSSGCLG-----TGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEV 95
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+WG QLG G ++ S P + T N + V ACG H++V DG
Sbjct: 96 YSWGHNAYSQLGNGSTNQALS--PCQVSTNLINKKAISV-------ACGSHHSMVLTCDG 146
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
+++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD 197
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALY 61
+Y WG S GQLG +G+K + P +V+ ++ AC HT A S+ G +Y
Sbjct: 253 MYAWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVY 307
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 308 MWGQCR-GQSVITPHLTHFS 326
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ S GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNSKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ + P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHGSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG G N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHGSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S+GQ G S G P+ + IK+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISSNLRGIVAE-PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNS 62
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 63 KGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWGA 110
Query: 128 NSYGQ 132
S GQ
Sbjct: 111 GSDGQ 115
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I +WG GQ+GH + D LP+ + L + +ACG H+ ALTS G LY+WG
Sbjct: 107 ILSWGDNDCGQVGHST--DNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+ +S +P+ S+ R IL +P + +ACG +H+ + + + G
Sbjct: 165 SNIYGQLGV----QSPKDLPH-SNAPLRLTTILGIP--LATIACGGNHSFLISKSSAVFG 217
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLTD 169
WG N+ GQ YPS + +G VR + G +S LT+
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ + GI + +ACGG H+ ++ A++ W
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGW 218
Query: 64 GGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL Q R++ P++ + R + GV+ V CG +++ +G +
Sbjct: 219 GKNTCGQLGLNDEQNRAY---PSQLKS-MRTL-------GVRFVTCGDEYSVFLTNEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S P V +G + ++A G H+ L +
Sbjct: 268 FTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPS 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y WG S GQLG +++ ++ LLP ++ ++ +ACG HT LT+ G +YA
Sbjct: 1 MALYCWGDASHGQLGLGGIEN-EQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGK 121
G QLG T+ R +PI + V + +ACG H++ G+
Sbjct: 60 CGNNDHHQLGHELPTK-------------RPLPIPELQAYVVIQIACGSRHSMALTEWGQ 106
Query: 122 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
I WG N GQ + P + + V V ++A G HS LT
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH + K LP + L + +ACG H+ ALT G + +WG
Sbjct: 57 VYACGNNDHHQLGH---ELPTKRPLP--IPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGK 121
GQ+G + +D +P + +V V +ACG++H+L G+
Sbjct: 112 DNDCGQVG------------HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGE 159
Query: 122 IHGWGYNSYGQAANEKST---YAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG N YGQ + ++ P + +G + +A GG HS +++ + ++
Sbjct: 160 LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAV 215
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYM 117
ALY WG GQLGLG +P++ I P+ VQ +ACGH HTL
Sbjct: 2 ALYCWGDASHGQLGLGGIENEQILLPSQ---------IEFKPDSPVQQIACGHRHTLFLT 52
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+G+++ G N + Q +E T P P + V ++A G HS LT+
Sbjct: 53 ANGQVYACGNNDHHQLGHELPTKRPLPIP-ELQAYVVIQIACGSRHSMALTE 103
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH + E++PR V+ L G I VACG HT AL S G +Y++
Sbjct: 267 VFTCGAGNYGQLGHGV---SNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSF 323
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 324 GLGASGQLG 332
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK PR + +L I+D+ACG H+ A+TS G LY WG
Sbjct: 3042 VFSWGEGEDGKLGHGNSISLDK---PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3098
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT ++ P LV V + +ACG + T+ D
Sbjct: 3099 LGEYGRLGHG-------------DTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTAD 3145
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P +D G V ++ G S LT
Sbjct: 3146 GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3195
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G I D+ACGG H+ A+TS G LY WG
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWG 4117
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G + E+ ++ I VACG + TL D +
Sbjct: 4118 KGRYGRLGHGDSEDQLTPKLIEALQDYKVID----------VACGSGDAQTLCVTDDDNV 4167
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG YG+ S P ++ G V K+ G S LT
Sbjct: 4168 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALT 4214
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG G+ G+LG C D P+ V L I + V CGG + ALT+ G +Y
Sbjct: 632 VFSWGDGNYGKLGRGGC-----DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYT 686
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +A +LG G NE + I ++ V+ + G+ H L D I
Sbjct: 687 WGKGEAYRLGHG----------NEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLI 736
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 737 YGWGRNDYGQ 746
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LGH GD+ P+ + AL I +ACG ++ AL+S G LY
Sbjct: 526 VYSWGNGDGGRLGH-----GDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYT 580
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG--VQLVACGH--SHTLVYM 117
WG G+LG G SD IP LV NG V VACG S TL
Sbjct: 581 WGRGNYGRLGHG-----------NSDNVM--IPTLVTALNGHMVVYVACGSGDSQTLCVT 627
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG +YG+ + P VD + V K+ GG SA LT
Sbjct: 628 ASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALT 679
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWGLG G+LGH + K P+ V +L G I +ACG T ALT+ G +Y
Sbjct: 3093 ELYTWGLGEYGRLGHGDTATQSK---PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVY 3149
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+WG G+LG G ++ P+L+ GV + CG +L +
Sbjct: 3150 SWGDGDFGKLGRGGSDGCYT-------------PLLIDRLNGLGVVQIECGAQFSLALTK 3196
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG Y + + + P+ V+ G +V +A G H +TD
Sbjct: 3197 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D ++P V AL+G + VACG T +T+ G ++
Sbjct: 577 ELYTWGRGNYGRLGH---GNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D ++ V V CG + G+
Sbjct: 634 SWGDGNYGKLGRGGCDGSKT--PKIVDK--------LLDINVAKVYCGGQFSAALTAYGE 683
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
++ WG + + + YP +D +V++L G H LT+
Sbjct: 684 VYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTE 732
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IYTWG G +LGH + D PR+V AL G I +A G +H A T KG ++ WG
Sbjct: 4219 IYTWGKGDYHRLGHGT---DDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4275
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4276 DNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4317
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P + L+G+ + + CG + ALT G ++ WG
Sbjct: 3148 VYSWGDGDFGKLGRGG---SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWG 3204
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3205 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQV 3252
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACSL 173
+ WG N +GQ N + PS V + V +++ G HS VLTD ++
Sbjct: 3253 YAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPTI 3306
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4166 NVWSWGDGDYGKLGRGG---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTW 4222
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4223 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4270
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4271 VFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4314
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +Y WGL QLG G K LP L + +A G ++ +G LY
Sbjct: 2933 HSAVYVWGLNDKDQLGGLK---GSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLY 2989
Query: 62 AWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
A G G+LGLG + IP S + + V G H L +D
Sbjct: 2990 ACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVS----------VHSGGKHALALTQD 3039
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
GK+ WG G+ + S P ++ + +R +A G GHSA +T + L
Sbjct: 3040 GKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+VG+LG + D ++P + ++ +F+K VA GG H AL+S+G +Y+
Sbjct: 4007 VYATGYGAVGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYS 4063
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG G+LG G + +Y R P L+ + + +ACG H+
Sbjct: 4064 WGEGDDGKLGHGNRL-----------SYDR--PKLIEELLGTEIVDIACGGHHSAAITSA 4110
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P ++ +V +A G G + L
Sbjct: 4111 GWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL 4159
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV I +A G H ALT ++Y+WG G+LG G
Sbjct: 488 GSETQYPQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHG------- 540
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
D + + P L+ V + +ACG +++ +G+++ WG +YG+ + S
Sbjct: 541 ------DRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNS 594
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 595 DNVMIPTLVTALNGHMVVYVACGSGDSQTL 624
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L P+ + L IK V+ GG H ALT G +++
Sbjct: 2988 LYACGEGTNGRLG---LGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G S S + P L+ ++ +ACG H+
Sbjct: 3045 WGEGEDGKLGHG---NSISL----------DKPRLIESLKSKRIRDIACGSGHSAAITSS 3091
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
G+++ WG YG+ + + P V VG+
Sbjct: 3092 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQ 3125
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G + VA G +H A+T G +YAW
Sbjct: 3199 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAW 3255
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G + I N+ + + V V+CG SH++ ++
Sbjct: 3256 GDNDHGQQGNG------TTIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3299
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + + G A+T+ G +YA G
Sbjct: 3955 IYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG+G T S +P T +I + V V G H L +G ++
Sbjct: 4012 YGAVGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYS 4063
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4064 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4110
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4270 EVFTWGDNDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAW 4317
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+A Q + T P E D +++P V+ N + L+
Sbjct: 4318 STMKATQSKMPATT------PMEYD-LVKDLPFPVLHNRLVLL 4353
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 104 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 160
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 161 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 210
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 211 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 259
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 155 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 269
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 270 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 329
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 330 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1152
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 1153 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 1199
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 1200 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 1252
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 1203 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 1259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 1260 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 1301
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 1302 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 1350
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 1255 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 1312 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 1353
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHG--NRSPCDRPRVI 1122
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 1123 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 1174
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 1175 EALQGHRVIDIACGSGDAQTL 1195
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 11/166 (6%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
GL QLG G K +P L + + VA G A+T +G +Y+ G
Sbjct: 1 GLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATN 57
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYN 128
G+LGLG + + IP + + V V G H DGK+ WG
Sbjct: 58 GRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDGKVFSWGEG 110
Query: 129 SYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
G+ + P ++ +R +A G HSA LT + L
Sbjct: 111 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 156
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 1306 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 1353
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P +P E + + + IPI+
Sbjct: 1354 STSKPASAGKLPAQ-----VPMEYN-HLQEIPII 1381
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 991 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 1046
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 1047 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 1099
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 1149
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3220 ELYTWGLGEYGRLGH-----GDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGA 3274
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSST--PHEIER-LSGI-------GVIQIECGAQFSLALTRA 3324
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3325 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDA 3376
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+D+ACG H+ A++S+G LY WG
Sbjct: 3169 VFSWGEGEDGKLGHGNRSTLDK---PRLVEALRAKKIRDIACGSSHSAAISSQGELYTWG 3225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV V VACG + TL D
Sbjct: 3226 LGEYGRLGHG-------------DNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTED 3272
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRA 3324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4321 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4377
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4378 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4427
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4428 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4477
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D + LP V+AL + DVA G HT LTS+G ++
Sbjct: 717 NLYTWGRGTYGRLGH---GTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVF 773
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG G+LG G + + S +P D R VQ V G +L +G+
Sbjct: 774 AWGDGDYGKLGNG--SCNSSLLPQLIDCLPR----------VQRVFAGAQFSLALSCEGQ 821
Query: 122 IHGWGYNS 129
++ WG S
Sbjct: 822 LYSWGKAS 829
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ + Y+WG+G +LGH + + LP ++ +L + +K V CG ++ A+T G LY
Sbjct: 664 NFNAYSWGVGDSRRLGHGDCHARE---LPTKIESLVRL-VKSVYCGCSYSAAITLGGNLY 719
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 119
WG G+LG G D + + + + V VA G +HTL +
Sbjct: 720 TWGRGTYGRLGHG----------TSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WG YG+ N + P +D C+ V+++ AG S L+
Sbjct: 770 GLVFAWGDGDYGKLGNGSCNSSLLPQLID-CLPRVQRVFAGAQFSLALS 817
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3326 EVWTWGKGDYYRLGH----GGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYA 3381
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3382 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVIVNRVACGSSHSMAW 3425
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4427 NVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4483
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4484 GKGDFHRLGHG------------SVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4531
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4532 VFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT+ G +YAWG + G+LG G +
Sbjct: 4285 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRM----- 4339
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4340 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4391
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4392 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4420
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3115 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3171
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N S + + ++ +ACG SH+ G++
Sbjct: 3172 WGEGEDGKLGHG----------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGEL 3221
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 3222 YTWGLGEYGR 3231
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + P + L GI + + CG + ALT G ++ WG
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSST---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3331
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3332 KGDYYRLGHG------------GDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQV 3379
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHS 164
+ WG N +GQ + + P+ V D + V ++A G HS
Sbjct: 3380 YAWGDNDHGQQGSGNTFVNKKPALVIGLDAVI--VNRVACGSSHS 3422
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
+++TWG GQLG ++ + + PR V AL G I V CG HT AL++
Sbjct: 4531 EVFTWGDNDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4580
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 3063 VMVWGLNDKEQLGGLK---GSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3120 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3171
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + + P V+ ++R +A G HSA ++
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAIS 3216
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG S LGH ++ + +PR + L I DVA G H AL+S G ++
Sbjct: 821 QLYSWGKASC--LGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFG 878
Query: 63 WG 64
WG
Sbjct: 879 WG 880
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + G+LG + P V G + +A G HT ALTS GAL AWG
Sbjct: 108 VLAWGNNTGGELGD---GTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWG 164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
G G+LG G T RN P+ V VP G + +A G H+L G
Sbjct: 165 GNGFGELGDG-------------TTTARNEPVPVNVPAGTTITAIAGGRGHSLALTSTGT 211
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ WG N+ GQ + + + P VD G V +A GG +S LT A ++
Sbjct: 212 VLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTV 264
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG GQLG + P V G I +A ++ ALTS GA+ AWG
Sbjct: 56 VLTWGENDFGQLGDGTTIDSST---PVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
G+LG G T R P+ V +P G V +A G HTL G
Sbjct: 113 NNTGGELGDGTNTD-------------RTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGA 159
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N +G+ + +T P PV+ G + +A G GHS LT
Sbjct: 160 LLAWGGNGFGELGDGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALT 207
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG + P V G + +A GG ++ ALTS G + AWG
Sbjct: 212 VLAWGKNNEGQLGD---GTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWG 268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGK 121
+GQ+G G T R+ P+ V +P G V +A G H++ G
Sbjct: 269 LNSSGQVGDG-------------TTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGT 315
Query: 122 IHGWGYNSYGQ 132
+ WG NS GQ
Sbjct: 316 VLAWGLNSSGQ 326
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL S GQ+G + D+ P V G + +A G H+ ALTS G + AWG
Sbjct: 264 VLAWGLNSSGQVGDGTTT--DRST-PVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+GQLG G T S + + N+P P+ H SH+L G I
Sbjct: 321 LNSSGQLGDGTTTDSTTPV-------DVNLP----PDTTITAITAHDGSHSLALTSTGTI 369
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKEL 176
WG NS G+ + +T P V+ G V + G HS LT + L
Sbjct: 370 LAWGLNSSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMALTAPPTSTTL 424
>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
L + WGL G C L + +L P V AL G+ + +A G HT +++G +Y
Sbjct: 308 QLLTFGWGL-----HGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVY 362
Query: 62 AWGGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
A+GG Q GQLG G Q + + + S+ + ++V+CG H++V G
Sbjct: 363 AFGGNQFGQLGTGADQAETLPKLLDASNLENKR---------AKIVSCGARHSVVLTEGG 413
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+I WG+N YGQ PSPV +++ +A G H+ +L
Sbjct: 414 EIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLL 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 12 SVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAG 69
S Q S S D+ L P V G+ I +A GG HT AL+ G ++ WG G
Sbjct: 179 SAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEG 238
Query: 70 QLGLGPQTRSFS---FIP-NESDTYFRNIPILV-------------VPNG-VQLVACGHS 111
QLGLG +T+ S IP Y ++ P LV VP V+ +ACG
Sbjct: 239 QLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGR 298
Query: 112 HTLVYMRDGKIHGWGYNSYGQ 132
H+ V G++ +G+ +GQ
Sbjct: 299 HSAVITDAGQLLTFGWGLHGQ 319
>gi|281209605|gb|EFA83773.1| RhoGAP domain-containing protein [Polysphondylium pallidum PN500]
Length = 1039
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-----CGGVHTCALTSKGA 59
+++ GL GQLG GD + P +VAL G K VA G HT ALT++GA
Sbjct: 95 VFSMGLNGAGQLG---TDIGDSAV-PLPIVALPGNIAKVVAGNQLVFGDQHTLALTNEGA 150
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+YAWG GQLGLG + +P E + + + + G H+ D
Sbjct: 151 IYAWGSNSRGQLGLGHNNDKVAPVPLEQLSTVVGYKMPAID-----IDAGQQHSAALTND 205
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLT 168
G + WG NSYGQ N + P + V + R +A G H+ +LT
Sbjct: 206 GVVFMWGSNSYGQLGNGGVEDSNMPVRIQVDVEDKRIHSIALGLNHTILLT 256
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S GQLG+ ++ + +P R+ V ++ I +A G HT LT+ G +Y +
Sbjct: 208 VFMWGSNSYGQLGNGGVEDSN---MPVRIQVDVEDKRIHSIALGLNHTILLTASGEVYTF 264
Query: 64 GGCQAGQLGLG 74
G ++ QLG G
Sbjct: 265 GSGESHQLGHG 275
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 27/156 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G G H + DK+L P L + + ++ G H+ A+ + G WG
Sbjct: 4 LYTWGKGKTGNTCH----NVDKKL-PTPPSVLISLNLDQLSMGANHSAAIVN-GECLMWG 57
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ T F+ +V V V+CG +HTL+ D ++
Sbjct: 58 EVMG----------------RKHTTLFK----IVWKKVVISVSCGFNHTLLLTEDRRVFS 97
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
G N GQ + A P P+ G + K+ AG
Sbjct: 98 MGLNGAGQLGTDIGDSA-VPLPIVALPGNIAKVVAG 132
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG S E +P V AL + VACG H ALT+ G LY+WG
Sbjct: 182 LFSWGSNAEGQLGLNS--KNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWG 239
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG + + I + + +PI + CG H++ + G + G
Sbjct: 240 SNSDGQLGLGTDVK--NEIKPKLISSLAGVPI-------AFITCGGYHSMAISKSGAVFG 290
Query: 125 WGYNSYGQ 132
WG N++GQ
Sbjct: 291 WGKNTFGQ 298
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G GQLGH + G K L + + LD K VACG HT A+ G L++WG
Sbjct: 132 VYSCGNNDYGQLGH---EKGRKRL--QLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWG 186
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDGK 121
GQLGL S +P +V G + VACG +H L +GK
Sbjct: 187 SNAEGQLGLN------------SKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGK 234
Query: 122 IHGWGYNSYGQ 132
++ WG NS GQ
Sbjct: 235 LYSWGSNSDGQ 245
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG S GQLG + E+ P+ + +L G+ I + CGG H+ A++ GA++ WG
Sbjct: 235 LYSWGSNSDGQLGLGT--DVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWG 292
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGK 121
GQLGL +DT RN+P + + N V ACG ++ DG
Sbjct: 293 KNTFGQLGL-------------NDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGG 339
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ G YGQ + ++ P V +G V +++ G H+
Sbjct: 340 VFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHT 383
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG G+LG ++ + L+PR + I+ +ACG +T +T G +Y+
Sbjct: 77 NMFCWGSTIHGELGLGGIED-ENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSC 135
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + IP F+ VACG HTL G++
Sbjct: 136 GNNDYGQLGHEKGRKRLQLIPGLDAFVFKK------------VACGAHHTLAVNEWGQLF 183
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
WG N+ GQ N K+ P V V ++A G H LT+
Sbjct: 184 SWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTN 231
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G GQLGH + + E+LPR+V+ L G + ++CG HT L S+G +YAW
Sbjct: 340 VFTCGAGMYGQLGHGNTSN---EILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAW 396
Query: 64 GGCQAGQLG 72
G AGQLG
Sbjct: 397 GLGGAGQLG 405
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------- 54
++T+G G+ G LGH +S +PR V +L G+ + VACG HT A+
Sbjct: 415 LFTFGDGTFGALGHGDRRSTS---VPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEA 471
Query: 55 ---TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH 110
+S+G ++ WG + GQLG G ++DT ++ + N + VACGH
Sbjct: 472 EVDSSRGQVFTWGDGEKGQLGHG-----------DNDTKLLPECVISLTNENICQVACGH 520
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLT 168
S T+ G ++ G +YGQ N + +P V D V ++A G H AVLT
Sbjct: 521 SLTVSRTSRGHVYTMGSTAYGQLGN-PTAKGNFPERVEGDIVEASVEEIACGSYHVAVLT 579
Query: 169 DACSL 173
+
Sbjct: 580 SKSEI 584
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH D +LLP V++L I VACG T + TS+G +Y G
Sbjct: 480 VFTWGDGEKGQLGHGD---NDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMG 536
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG P + + +V V+ +ACG H V +I+
Sbjct: 537 STAYGQLG----------NPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYT 586
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVL 167
WG GQ + P+ V + +V+ + G +AV+
Sbjct: 587 WGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 630
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P+ + ++ G+ K +ACG HTCA+T G LY+WG LG S +IP
Sbjct: 330 PKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 389
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ + V VACG HT V G++ +G ++G + P V+
Sbjct: 390 DLQGL-------YVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVES 442
Query: 150 CVGE-VRKLAAGGGHSAVLTD 169
+G V K+A G H+A + +
Sbjct: 443 LIGLIVTKVACGVWHTAAVVE 463
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 4 DIYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
D++ WG G + G+ + + LLP+ + + + +++ACG H +T +G
Sbjct: 248 DVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGE 307
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG + G+LG G +T + + + ++ L G + +ACG HT +
Sbjct: 308 IFSWGEGKGGKLGHGLETDA------QKPKFISSVRGL----GFKSLACGDFHTCAITQS 357
Query: 120 GKIHGWGYNSYGQA----ANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLTDACSL 173
G ++ WG ++ NE S W P V D V +A G H+AV+ + L
Sbjct: 358 GDLYSWGDGTHNVDLLGHGNESS--CWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 415
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G QLG S + D E P V++L F+ ++ACGG+H+ A T+ G + +W
Sbjct: 253 NLYTWGQGRFNQLG-LSAKPSDHETTPSPVMSLR--FVHEIACGGLHSLANTNAGVV-SW 308
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q G+LG G + S +P PI + G +A G H+ + +GK+
Sbjct: 309 GANQHGELGHGHHSDIKSAVPK---------PIKMGSRGWSKLAAGWKHS-AGIANGKLF 358
Query: 124 GWGY-NSYGQAANEKSTYA-----------WYPSPVDWCVGEVRKLAAGGGHSAVLTDAC 171
WG+ S G A+EK + W P V GEV+ ++ G H+ L D
Sbjct: 359 AWGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVS-VPGEVKDVSCGFNHTLALVDTH 417
Query: 172 S 172
S
Sbjct: 418 S 418
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 5 IYTWGLGSVGQLGHCS--------LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
+Y+WG + G LGH S ++ EL PR V +L+ + VA G +H+ +
Sbjct: 191 VYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDD 250
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+G LY WG + QLGL + P+ P++ + V +ACG H+L
Sbjct: 251 RGNLYTWGQGRFNQLGLSAKPSDHETTPS---------PVMSL-RFVHEIACGGLHSLAN 300
Query: 117 MRDGKIHGWGYNSYGQA--ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
G + WG N +G+ + + P P+ KLAAG HSA + +
Sbjct: 301 TNAGVV-SWGANQHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIAN 354
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T GL + GQLGH + E + +V LD + + VA G HT + G ++A+G
Sbjct: 88 VFTCGLNADGQLGHSAGLPFSPEPM---LVRLD-VEVVSVAAGNGHTLCVDVDGCVWAFG 143
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQLG G N T R I L V VACG H+L DG+++
Sbjct: 144 KNTAGQLGTG----------NVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYS 193
Query: 125 WGYNSYGQAANEKSTY--AWY--PSPVDWCVGEVRKL--------AAGGGHSAVLTDACS 172
WG ++ G + T+ W+ + + VR L AAG HSA + D +
Sbjct: 194 WGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGN 253
Query: 173 LKELCEFRLAESVTLSNASEIEDVAS 198
L + R + + S+ E S
Sbjct: 254 LYTWGQGRFNQLGLSAKPSDHETTPS 279
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++ +G + GQLG ++ +PR++ AL + VACG H+ A+ G +Y+W
Sbjct: 139 VWAFGKNTAGQLGTGNVDG----TIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSW 194
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLV 115
G G LG G +T + + ++R + P V+ VA GH H+
Sbjct: 195 GSSTDGVLGHGSETWNDGW-------FYRTARAELAPRLVRSLEDKKVVAVAAGHMHSAC 247
Query: 116 YMRDGKIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G ++ WG + Q + + S + PSPV + V ++A GG HS T+A
Sbjct: 248 IDDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPV-MSLRFVHEIACGGLHSLANTNA 303
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 26/172 (15%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRR------VVALDGIFIKDVACGGVHTCALTSKGALYA 62
G G G+LGH S PR V + + ++ VA GG H+ L + G ++
Sbjct: 31 GNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAGGHVFT 90
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGK 121
G GQLG + F P P+LV + V VA G+ HTL DG
Sbjct: 91 CGLNADGQLG---HSAGLPFSPE---------PMLVRLDVEVVSVAAGNGHTLCVDVDGC 138
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
+ +G N+ GQ N T P + E R ++A G HS + D
Sbjct: 139 VWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVAD 187
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G GQLGH S+ + D+ R V AL I I D++CG HT ALT+KG +Y+WG
Sbjct: 374 VFSWGRGINGQLGHGSVLNEDQ---VRPVSALQNIHIIDISCGESHTLALTNKGEVYSWG 430
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
G Q GQL D +++PI V + + + ++ G H+ DGK+
Sbjct: 431 GGQLGQL-------------GHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKL 477
Query: 123 HGWGYNSYGQAANE 136
WG N YGQ +
Sbjct: 478 FTWGSNEYGQLGRQ 491
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G G+LG+ ++ K+ P+ + L G + ++ G H A+T +G +++W
Sbjct: 321 NVYTWGSGEFGRLGYMDIK---KQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSW 377
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G P + +NI I+ + +CG SHTL G+++
Sbjct: 378 GRGINGQLGHGSVLNEDQVRPVSA---LQNIHIIDI-------SCGESHTLALTNKGEVY 427
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG GQ + P V + +++AG HS+ LTD
Sbjct: 428 SWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTD 473
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTS--KGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P RV+AL+ I V CG T +T + +++WG Q +LG S+ + P+ +
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLG-----HSY-YKPSPN 138
Query: 88 DTYFRNIPILVVPNGVQL--------VACGHSHTLVYMRD-GKIHGWGYNSYGQAANEKS 138
+ +I I+ P V+ ++CG SH+ + + G ++GWG G+ NE
Sbjct: 139 NVSSSSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENE 198
Query: 139 TYAWYP 144
P
Sbjct: 199 GVVQEP 204
>gi|71412092|ref|XP_808247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70872413|gb|EAN86396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 301
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 16/119 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG+G G+LGH GDKE L+P +V AL G + DVACG HT ALT +GA+
Sbjct: 52 ELFTWGVGYQGRLGH-----GDKEPALVPTKVRGALTGQHVIDVACGSFHTVALTERGAV 106
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMR 118
Y WG +GQ G + + + +R + + V GV + ++CG HT+V M+
Sbjct: 107 YCWGDNASGQCGAKSTIDAVT-------SPYRVVNLEFVAGGVAKAISCGRQHTVVVMQ 158
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V G H+ + + G L+ WG G+LG G + + +P + ++
Sbjct: 37 VHAGQWHSGVINTAGELFTWGVGYQGRLGHG--DKEPALVPTKVRGALTGQHVI------ 88
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP-----VDWCVGEVRK-L 157
VACG HT+ G ++ WG N+ GQ KST SP +++ G V K +
Sbjct: 89 -DVACGSFHTVALTERGAVYCWGDNASGQCG-AKSTIDAVTSPYRVVNLEFVAGGVAKAI 146
Query: 158 AAGGGHSAVL 167
+ G H+ V+
Sbjct: 147 SCGRQHTVVV 156
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+++WGL S GQLG + + P + AL G+ + +A GG H+ LT +Y
Sbjct: 1834 DVFSWGLNSHGQLGLG--KEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCC 1891
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFR-NIPIL--VVPNGVQLVACGHSHTLVYMRDG 120
G + GQLG+ N D R NI ++ + P V ++CG SH+ V +DG
Sbjct: 1892 GANKCGQLGV-----------NRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDG 1940
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
K++ +G S GQ + S P V G ++A G H+ VL
Sbjct: 1941 KVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPASQIACGRHHTLVL 1987
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ + G S GQLG ++G + +V AL + +ACG H A+++ G +++W
Sbjct: 1731 NVLSCGHNSQGQLGRQKKKNGK---IIAQVEALGSVVA--MACGQDHCLAVSASGHVFSW 1785
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL +P S ++ + + +P + VACG+SH+L + G +
Sbjct: 1786 GAGEDGQLGL---------LPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVF 1836
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV---GEVRKLAAGGGHSAVLTDA 170
WG NS+GQ K + +PV C V ++AAGG HS LT A
Sbjct: 1837 SWGLNSHGQLGLGKEVPVQH-TPVIICALAGVAVTQIAAGGTHSLFLTLA 1885
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GS GQLGH + E+ P+ V LDG +ACG HT L S G L+A+G
Sbjct: 1942 VYTFGDGSQGQLGH---STSANEVKPKLVAGLDGP-ASQIACGRHHTLVLGSSGQLWAFG 1997
Query: 65 GCQAGQLGLG 74
GQ G G
Sbjct: 1998 SGAKGQTGNG 2007
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 16/104 (15%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
L+ WG +GQ G S+ VP + + CG HTL D
Sbjct: 1685 LFCWGDSSSGQFGPQAAPSPVSW---------------TVPGVITKICCGDRHTLFLNAD 1729
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
G + G+NS GQ +K + V+ +G V +A G H
Sbjct: 1730 GNVLSCGHNSQGQLGRQKKKNGKIIAQVE-ALGSVVAMACGQDH 1772
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------- 54
++T+G G+ G LGH +S +PR V +L G+ + VACG HT A+
Sbjct: 428 LFTFGDGTFGALGHGDRRSTS---VPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEA 484
Query: 55 ---TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH 110
+S+G ++ WG + GQLG G ++DT ++ + N + VACGH
Sbjct: 485 EVDSSRGQVFTWGDGEKGQLGHG-----------DNDTKLLPECVISLTNENICQVACGH 533
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLT 168
S T+ G ++ G +YGQ N + +P V D V ++A G H AVLT
Sbjct: 534 SLTVSRTSRGHVYTMGSTAYGQLGN-PTAKGNFPERVEGDIVEASVEEIACGSYHVAVLT 592
Query: 169 DACSL 173
+
Sbjct: 593 SKSEI 597
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH D +LLP V++L I VACG T + TS+G +Y G
Sbjct: 493 VFTWGDGEKGQLGH---GDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMG 549
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG P + + +V V+ +ACG H V +I+
Sbjct: 550 STAYGQLG----------NPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYT 599
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVL 167
WG GQ + P+ V + +V+ + G +AV+
Sbjct: 600 WGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 643
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P+ + ++ G+ K +ACG HTCA+T G LY+WG LG S +IP
Sbjct: 343 PKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 402
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ + V VACG HT V G++ +G ++G + P V+
Sbjct: 403 DLQGL-------YVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVES 455
Query: 150 CVGE-VRKLAAGGGHSAVLTD 169
+G V K+A G H+A + +
Sbjct: 456 LIGLIVTKVACGVWHTAAVVE 476
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 4 DIYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
D++ WG G + G+ + + LLP+ + + + +++ACG H +T +G
Sbjct: 261 DVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGE 320
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG + G+LG G +T + + + ++ L G + +ACG HT +
Sbjct: 321 IFSWGEGKGGKLGHGLETDA------QKPKFISSVRGL----GFKSLACGDFHTCAITQS 370
Query: 120 GKIHGWGYNSYGQA----ANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLTDACSL 173
G ++ WG ++ NE S W P V D V +A G H+AV+ + L
Sbjct: 371 GDLYSWGDGTHNVDLLGHGNESS--CWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 428
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKS 3227
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G + D+A GG H+ +T+ G LY W
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGTEVVDIAAGGAHSACITAAGELYTW 4128
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4129 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4178
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4179 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKS 4228
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T ++T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIAITKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G+++ WG + + + YP ++ G +V +A G H LT++
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTES 727
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 59/219 (26%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTK 3237
Query: 88 --------------DTYFRNIPILVVPNGVQLVACGHSHTLVYMR---DGKIHGWGYNSY 130
+ + + + V G L C L ++ K++ WG N +
Sbjct: 3238 HCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDH 3297
Query: 131 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
GQ N +T P+ V G+ + ++A G HS T
Sbjct: 3298 GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWT 3336
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4179 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWG 4235
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4236 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4277
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4278 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4326
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF----IKDVACGGVHTCALTSKGA 59
++++WG G G+LGH S ++ P+ V AL G + +ACG ++ A+T+ G
Sbjct: 515 ELFSWGCGDGGRLGHGDTVSLEE---PKLVSALSGKQTGKQVIHIACGSTYSAAITADGE 571
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLV----ACGHSHTL 114
LY WG G+LG G + + +P+LV G+++V G + TL
Sbjct: 572 LYTWGRGNYGRLGHG-------------SSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G++ WG YG+
Sbjct: 619 SVTENGQVWSWGDGDYGK 636
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4231 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4287
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4288 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4329
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T++G +
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKV 3017
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H DG
Sbjct: 3018 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHATALTVDG 3070
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4094
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ G ++V A G +H+ G+++ WG YG+ + S P
Sbjct: 4095 PRVIESL------RGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPK 4148
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V+ G V +A G G + L
Sbjct: 4149 LVEALQGYRVIDIACGSGDAQTL 4171
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + A+T G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-----LVACGHSHTLVYMRD 119
+LG G ++ + R I+ NG+Q VA G +H L
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKIM---NGLQGKKVVDVAVGSTHCLALTES 727
Query: 120 GKIHGWGYNSYGQ 132
G+++ WG N Q
Sbjct: 728 GEVYSWGSNDQCQ 740
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G I VACG HT A TSK A
Sbjct: 4282 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 4335
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3967 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4022
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4023 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4075
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGEL 4125
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-----NG 102
G H AL++ L++WG G+LG G DT P LV G
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHG-------------DTVSLEEPKLVSALSGKQTG 550
Query: 103 VQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 159
Q++ ACG +++ DG+++ WG +YG+ + S P V G +V ++
Sbjct: 551 KQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSC 610
Query: 160 GGGHSAVLT 168
G G + L+
Sbjct: 611 GSGDAQTLS 619
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G L+ W
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTW 4120
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4170
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKELCEFR 180
+ WG YG+ S P +D G V K+ G S LT + ++ FR
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFR 4230
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3018 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3070
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 29/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4171 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQ 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
R + + + SD + R P VQ +A G H +
Sbjct: 4228 -----------VFRDYHRLGHGSDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4270
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4271 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4319
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + ALT G +Y WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4090
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G + WG YG+ + S P V
Sbjct: 4091 ES-LRGIEVVD-------VAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4143 EALQGYRVIDIACGSGDAQTL 4163
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 5 IYTWGL-GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTW + +LGH S D PR+V L G + +A G +H T G +Y W
Sbjct: 4223 VYTWQVFRDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4279
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
G GQLG G T P LV + VACG +HTL +
Sbjct: 4280 GDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4322
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4322
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4323 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4350
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3959 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4014
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4015 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4067
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDL 4117
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ V +L I +A G H AL++ G +++WG G+LG G +P E
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEE 538
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ V +ACG +++ +G+++ WG +YG+ + S P V
Sbjct: 539 PKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
G +V ++ G G + L
Sbjct: 599 TGLKGLKVIDVSCGSGDAQTL 619
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3204 ELYTWGLGEYGRLGH-----GDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGA 3258
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3259 VFSWGDGDFGKLGRGGSEGSAT--PHEIE-RLSGI-------GVIQIECGAQFSLALTRA 3308
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3309 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDA 3360
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+D+ACG H+ A++S+G LY WG
Sbjct: 3153 VFSWGEGEDGKLGHGNRSTLDK---PRLVEALRAKKIRDIACGSSHSAAISSQGELYTWG 3209
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV V VACG + TL D
Sbjct: 3210 LGEYGRLGHG-------------DNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTED 3256
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3257 GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRA 3308
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ + L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4306 EVYAWGEGEDGKLGHGNRMSYDR---PKLLEHLNGMSVADIACGSAHSAAITASGHVLTW 4362
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4363 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4412
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4413 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4462
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y+WG+G +LGH + + LP ++ +L ++ V CG ++ A+T +G LY W
Sbjct: 637 NAYSWGVGDSRRLGHGDCHARE---LPTKIESLVR-RVQSVYCGCSYSAAITLRGNLYTW 692
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G G+LG G N D + + + + V VA G +HTL R G
Sbjct: 693 GRGTYGRLGHG----------NSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGL 742
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
++ WG YG+ N + P ++ C+ V+++ AG S LT
Sbjct: 743 VYAWGDGDYGKLGNGSCNSSLQPLLIE-CLPRVQRVFAGSQFSLALT 788
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 21/130 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D + +P V+AL + DVA G HT LT G +Y
Sbjct: 688 NLYTWGRGTYGRLGH---GNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVY 744
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S P+L+ +P VQ V G +L +
Sbjct: 745 AWGDGDYGKLGNGSCNSSLQ-------------PLLIECLPR-VQRVFAGSQFSLALTCE 790
Query: 120 GKIHGWGYNS 129
G+++ WG S
Sbjct: 791 GQLYSWGKAS 800
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3310 EVWTWGKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3365
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3366 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSMAW 3409
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4412 NVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4468
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4469 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4517 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT+ G +YAWG + G+LG G
Sbjct: 4270 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHG-------- 4321
Query: 83 IPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ + +L NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4322 ----NRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4377
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4378 QLRPKLVEALLGYRAIDIACGSGDAQTL 4405
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3099 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3155
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N S + + ++ +ACG SH+ G++
Sbjct: 3156 WGEGEDGKLGHG----------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGEL 3205
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 3206 YTWGLGEYGR 3215
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + P + L GI + + CG + ALT G ++ WG
Sbjct: 3259 VFSWGDGDFGKLGR---GGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3315
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3316 KGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3363
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3364 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3406
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 3047 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3103
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3104 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3155
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + + P V+ ++R +A G HSA ++
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAIS 3200
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 46 CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGV 103
C G H A+ S Y+WG + +LG G D + R +P + + V
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHG-------------DCHARELPTKIESLVRRV 670
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAA 159
Q V CG S++ G ++ WG +YG+ + S P+ V D V +V L +
Sbjct: 671 QSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDV-ALGS 729
Query: 160 GGGHSAVLT 168
G H+ LT
Sbjct: 730 GDAHTLCLT 738
>gi|262193494|ref|YP_003264703.1| chromosome condensation regulator RCC1 [Haliangium ochraceum DSM
14365]
gi|262076841|gb|ACY12810.1| regulator of chromosome condensation RCC1 [Haliangium ochraceum DSM
14365]
Length = 1207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQS-GDKE-LLPRRVVALDGIFIKDVACGGVHTCALTS----KG 58
+Y WG GQLG+ + Q+ GD E +L V+LDG+ + +A GG HTCA+ + G
Sbjct: 490 VYCWGKNHFGQLGYGTTQNLGDSEPVLSFGYVSLDGLATR-IAAGGDHTCAIVNSASMSG 548
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L WG AGQLG+G +F+ +E R+IP+ V V G SHT +
Sbjct: 549 GLRCWGRNDAGQLGVG---DTFALGDDEEVFGLRDIPL---GGPVADVVLGGSHTCALLE 602
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-----GEVRKLAAGGGHSAVLTDACSL 173
G + WG N+YG+ + +D G VRKL AG H+ L ++ +
Sbjct: 603 SGAVRCWGENAYGRLGYGHTLRLGDDETLDELTDVLMPGPVRKLVAGEAHTCALFESGGV 662
Query: 174 K 174
+
Sbjct: 663 R 663
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 8 WGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG GQLG D+E+ R + L G + DV GG HTCAL GA+ WG
Sbjct: 553 WGRNDAGQLGVGDTFALGDDEEVFGLRDIPLGGP-VADVVLGGSHTCALLESGAVRCWGE 611
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R D + +++P V+ + G +HT G + W
Sbjct: 612 NAYGRLGYGHTLRL------GDDETLDELTDVLMPGPVRKLVAGEAHTCALFESGGVRCW 665
Query: 126 GYNSYGQAANEKSTYAW------YPSPVDWCV---GEVRKLAAGGGHSAVL 167
G +YG A +T W P+ + V G+V +AAG H+ L
Sbjct: 666 GQGNYG-ALGHGTTSHWGDGAGETPAALAADVATGGQVVDIAAGAQHTCAL 715
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GS G+LG+ ++ + + P + L +A GG HTC + + GA+ W
Sbjct: 720 EVTCWGAGSAGRLGYGNVSTRNT---PGPELDLGQSNAFQIAAGGAHTCVIDNAGAVRCW 776
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----------VP---NGVQLVACGH 110
G AG+LG G + P VP N V V G
Sbjct: 777 GEGGAGRLGTGTPAAVLAAADALIAPVLAEGPGCTDTGEDSNEDGVPDACNSVTAVVAGS 836
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ---AANEKSTYAWYPSPV-DWCV-GEVRKLAAGGGHSA 165
+HT + G++ WG ++YGQ A+ + +P+ + D V G V +L AG H+
Sbjct: 837 AHTCALLDTGRVRCWGRSNYGQLGYASTATVGASNHPASMGDVDVGGRVIQLVAGNYHTC 896
Query: 166 VLTDACSLK 174
L DA S++
Sbjct: 897 ALLDAGSVR 905
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAWGG 65
WG G+ G+LG+ + GD E P +D G + ++A GG H CA+ S G L WG
Sbjct: 963 WGYGAQGRLGYGNTDDIGDTES-PASAGDVDVGGAVAEIAAGGGHACAILSDGRLRCWGY 1021
Query: 66 CQAGQLGLGPQTR-SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T P ++P+ VQ+VA G HT +R G +
Sbjct: 1022 GTYGQLGTGNSTNIGDGETPASVSPVAFDVPV------VQVVA-GEYHTCARLRGGAVRC 1074
Query: 125 WGYNSYGQAANEKSTYAWYP 144
WG ++ GQ ++ + P
Sbjct: 1075 WGRSNQGQLGYHSTSTLYSP 1094
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAWGG 65
WG G+ G LG+ + + GD E P +D G + +A G HTCAL G++ WG
Sbjct: 907 WGQGANGLLGYGNTNNIGDTET-PASAGDVDVGGRVIQLAAGVAHTCALLETGSVRCWGY 965
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G + ES ++ V V +A G H + DG++ W
Sbjct: 966 GAQGRLGYG---NTDDIGDTESPASAGDVD---VGGAVAEIAAGGGHACAILSDGRLRCW 1019
Query: 126 GYNSYGQAANEKST 139
GY +YGQ ST
Sbjct: 1020 GYGTYGQLGTGNST 1033
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 8 WGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG + G+LG+ +L+ GD E L L ++ + G HTCAL G + WG
Sbjct: 609 WGENAYGRLGYGHTLRLGDDETLDELTDVLMPGPVRKLVAGEAHTCALFESGGVRCWGQG 668
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHG 124
G LG G T + E+ V G Q+V A G HT + ++
Sbjct: 669 NYGALGHG-TTSHWGDGAGETPAAL----AADVATGGQVVDIAAGAQHTCALLTSSEVTC 723
Query: 125 WGYNSYGQAANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTDACSLK 174
WG S G+ + P P +D ++AAGG H+ V+ +A +++
Sbjct: 724 WGAGSAGRLGYGNVSTRNTPGPELDLGQSNAFQIAAGGAHTCVIDNAGAVR 774
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG + GQLG+ S + P + +D G + + G HTCAL G++ WG
Sbjct: 851 WGRSNYGQLGYASTATVGASNHPASMGDVDVGGRVIQLVAGNYHTCALLDAGSVRCWGQG 910
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
G LG G T + +++T + V +QL A G +HT + G + WG
Sbjct: 911 ANGLLGYG-NTNNI----GDTETPASAGDVDVGGRVIQLAA-GVAHTCALLETGSVRCWG 964
Query: 127 YNS-----YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD 169
Y + YG + T + + G V ++AAGGGH+ A+L+D
Sbjct: 965 YGAQGRLGYGNTDDIGDTESPASAGDVDVGGAVAEIAAGGGHACAILSD 1013
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 8 WGLGSVGQLGHC-SLQSGDK-ELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAWG 64
WG + GQLG+ S+ GD + LP + G +K +A G HTCALT GA+Y WG
Sbjct: 435 WGDNTYGQLGYGDSVNVGDSVQRLPYAAGDVPLGEPVKQLAVGDDHTCALTLAGAVYCWG 494
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
GQLG G P S Y V +G+ +A G HT + +
Sbjct: 495 KNHFGQLGYGTTQNLGDSEPVLSFGY-------VSLDGLATRIAAGGDHTCAIVNSASMS 547
Query: 124 G----WGYNSYGQ--------AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAC 171
G WG N GQ +++ + P+ G V + GG H+ L ++
Sbjct: 548 GGLRCWGRNDAGQLGVGDTFALGDDEEVFGLRDIPLG---GPVADVVLGGSHTCALLESG 604
Query: 172 SLK 174
+++
Sbjct: 605 AVR 607
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-- 98
+ V G HTCALT G + WG GQLG G N D+ R +P
Sbjct: 413 LARVLAGRAHTCALTGDGRVRCWGDNTYGQLGYGDSV-------NVGDSVQR-LPYAAGD 464
Query: 99 VPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-----DWCV 151
VP G V+ +A G HT G ++ WG N +GQ + PV
Sbjct: 465 VPLGEPVKQLAVGDDHTCALTLAGAVYCWGKNHFGQLGYGTTQNLGDSEPVLSFGYVSLD 524
Query: 152 GEVRKLAAGGGHSAVLTDACSLK 174
G ++AAGG H+ + ++ S+
Sbjct: 525 GLATRIAAGGDHTCAIVNSASMS 547
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRRVVALD---GIFIKDVACGGVHTCALTSKGALYAW 63
WG G+ G LGH + GD +A D G + D+A G HTCAL + + W
Sbjct: 665 WGQGNYGALGHGTTSHWGDGAGETPAALAADVATGGQVVDIAAGAQHTCALLTSSEVTCW 724
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP----ILVVPNGVQLVACGHSHTLVYMRD 119
G AG+LG G + RN P L N Q +A G +HT V
Sbjct: 725 GAGSAGRLGYG-------------NVSTRNTPGPELDLGQSNAFQ-IAAGGAHTCVIDNA 770
Query: 120 GKIHGWGYNSYGQ 132
G + WG G+
Sbjct: 771 GAVRCWGEGGAGR 783
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ- 132
G T + +PN+ + P G+ V G +HT DG++ WG N+YGQ
Sbjct: 388 GVTTLYYELVPNQFADVITDDPAA----GLARVLAGRAHTCALTGDGRVRCWGDNTYGQL 443
Query: 133 ----AANEKSTYAWYP-SPVDWCVGE-VRKLAAGGGHSAVLT 168
+ N + P + D +GE V++LA G H+ LT
Sbjct: 444 GYGDSVNVGDSVQRLPYAAGDVPLGEPVKQLAVGDDHTCALT 485
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 21/134 (15%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L + WGL G C S D EL P V +L GI I++VA G HT ++ G +Y+
Sbjct: 326 LLTFGWGL-----YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYS 380
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
+GG Q GQLG G ++++T + +L PN V++++CG HT V
Sbjct: 381 FGGNQFGQLGTG---------CDQAETLPK---LLEAPNLENVNVKIISCGARHTAVIAD 428
Query: 119 DGKIHGWGYNSYGQ 132
+GK+ WG+N YGQ
Sbjct: 429 EGKVFCWGWNKYGQ 442
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+Y++G GQLG Q+ E LP+ + A L+ + +K ++CG HT + +G ++
Sbjct: 377 DVYSFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVF 433
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLV 115
WG + GQLGLG D RN P V VP +ACG HTL+
Sbjct: 434 CWGWNKYGQLGLG-------------DVIDRNAPSEVRIKDCVPKN---IACGWWHTLL 476
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF-- 82
D LP V G+ I VA GG HT AL+ G ++ WG GQLGLG + R S
Sbjct: 214 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPH 273
Query: 83 -IP-NESDTYFRNIP-----------ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNS 129
IP E +Y + V+ + V+ +ACG H+ V G + +G+
Sbjct: 274 PIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 333
Query: 130 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
YGQ + P+ V +G + ++AAG H+
Sbjct: 334 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 369
>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 454
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+I+ WG GQLG ++ SG D P+RV LD + ++ GV + A+ G+L+
Sbjct: 102 EIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDNVNVRAAFASGVVSAAIGDDGSLWV 161
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGLG + +P+ +T + V V+ G H L DGK+
Sbjct: 162 WGRSKRGQLGLGKGIIE-ARVPSRVET--------LAAEHVVKVSLGWGHALALTVDGKV 212
Query: 123 HGWGYNSYGQAAN 135
GWGY + G+ N
Sbjct: 213 FGWGYVADGRVGN 225
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 73/196 (37%), Gaps = 39/196 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG L G E +P RV L + V+ G H ALT G ++ W
Sbjct: 159 LWVWGRSKRGQLG---LGKGIIEARVPSRVETLAAEHVVKVSLGWGHALALTVDGKVFGW 215
Query: 64 GGCQAGQLG-----------------------------LGPQTRSFSFIPNESDTYFRNI 94
G G++G + + + E+D
Sbjct: 216 GYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAAEKKVVEAMSKENDMPIAWE 275
Query: 95 PILVVPN---GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
P LV V +ACG H+L+ DG + G N YGQ K +PVD
Sbjct: 276 PCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLGM--TPVDITE 333
Query: 152 GEVRKLAAGGGHSAVL 167
+ +AAG GHS +
Sbjct: 334 SPI-SIAAGLGHSLAI 348
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I +WG QLG G E LPR V DG V+ G VH+ +T KG + WG
Sbjct: 356 ILSWGWNRSRQLGR-----GKPEHLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWG 410
Query: 65 GCQAGQLGLGPQT 77
+ G+LGLG +
Sbjct: 411 CGKNGRLGLGSSS 423
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTS----KGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
R+V + +F +D G+ TS + + ++G G LGL S S IP
Sbjct: 13 RKVSTSESLFCRDGLFNGLVRRQFTSTRGERRTVMSFGDGNHGALGL-----SSSSIPGM 67
Query: 87 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ + +P+ + ++ GH H+L G+I WG N GQ
Sbjct: 68 GMDAYEPTVVSNLPSDISFISAGHYHSLAVTFGGEIWAWGRNDEGQ 113
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ + D+ACG H+ L G L + G GQLG Q + P+ +
Sbjct: 285 VKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLGMT-------------PVDI 331
Query: 99 VPNGVQLVA-CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RK 156
+ + + A GHS + + KI WG+N Q K + P V+ GE
Sbjct: 332 TESPISIAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPEH--LPREVEGFDGESPAS 389
Query: 157 LAAGGGHSAVLTD 169
++AG HS +T+
Sbjct: 390 VSAGRVHSLCVTE 402
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3150
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G T P LV V VACG + TL D
Sbjct: 3151 LGEYGRLGHGDNTTQLK-------------PKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 3249
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3145 ELYTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 3199
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRA 3249
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3250 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4262
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4263 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++ TWG G+ +LGH + D LP VVAL + DVA G H+ ALTS+G ++
Sbjct: 688 NLLTWGRGTYARLGHGN---SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ V G ++ +
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQRVFAGSQFSVALSSE 790
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 791 GQLYTWG 797
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ Y+WG G +LGH GD +P ++ AL+ ++ V CG ++ A+T G L
Sbjct: 636 NAYSWGTGEDHRLGH-----GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 690
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVY 116
WG +LG G N D R++P LVV +V G +H+L
Sbjct: 691 TWGRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+G + WG YG+ N + P V+ + V+++ AG S L+
Sbjct: 738 TSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSVALS 788
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4262 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4319 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3251 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3306
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3307 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3350
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3040 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFS 3096
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ VACG SH+
Sbjct: 3097 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3143
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G+++ WG YG+ + +T P V G V ++A G + L
Sbjct: 3144 GELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4120 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM----- 4174
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4175 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4226
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4227 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3257 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3305 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3347
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 10 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVHTCALTSKGALYAWGGCQA 68
L G+L L + E LP VA D +FI C G H A+ S Y+WG +
Sbjct: 587 LSQEGKLYTWRLAKPEAEPLPMEEVAHD-VFISIAGHCEGRHFLAIDSNHNAYSWGTGED 645
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGW 125
+LG G DT+ R +P + + VQ V CG S++ G + W
Sbjct: 646 HRLGHG-------------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 692
Query: 126 GYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLT 168
G +Y + + S P+ V D V +V L +G HS LT
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-ALGSGDAHSLALT 738
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 2988 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 3044
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3045 EGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVA------VHSGGKHALALTLDGKVFS 3096
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L + WGL G C S D EL P V +L GI I++VA G HT +S G +YA
Sbjct: 332 LLTFGWGL-----YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYA 386
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
+GG Q GQLG G ++++T + +L PN V+ ++CG HT V
Sbjct: 387 FGGNQFGQLGTG---------CDQAETLPK---LLEAPNLENVNVKTISCGARHTAVITD 434
Query: 119 DGKIHGWGYNSYGQ 132
+G++ WG+N YGQ
Sbjct: 435 EGRVFCWGWNKYGQ 448
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF-- 82
D LP V G+ I VA GG HT AL+ G ++ WG GQLGLG + R S
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPH 279
Query: 83 -IP-NESDTYFR------NIPIL-----VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNS 129
IP E +Y + N+ + V+ + V+ +ACG H+ V G + +G+
Sbjct: 280 PIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 339
Query: 130 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
YGQ + P+ V +G + ++AAG H+
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+Y +G GQLG Q+ E LP+ + A L+ + +K ++CG HT +T +G ++
Sbjct: 383 DVYAFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVF 439
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTLV 115
WG + GQLG+G D RN P + + + +ACG HTL+
Sbjct: 440 CWGWNKYGQLGIG-------------DVIDRNAPAEVRIKDCFPKNIACGWWHTLL 482
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
G ++K +ACGG H+ +T GAL +G GQ G G S S R
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR----- 364
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---V 154
++ VA G HT DG ++ +G N +GQ P ++ E V
Sbjct: 365 -----IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNV 419
Query: 155 RKLAAGGGHSAVLTD 169
+ ++ G H+AV+TD
Sbjct: 420 KTISCGARHTAVITD 434
>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 402
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG L D P V AL GI + D +CG HT +T+ G YAWG
Sbjct: 70 VFTWGRNETGQLG---LGDVDNRAAPTEVKALAGIKVVDGSCGKSHTVVVTADGNAYAWG 126
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL-VYMRDGKIH 123
+ GQLG+G R+ P E D R +P+ + VACG ++ + DGK+
Sbjct: 127 SNKHGQLGVGSIART---KPKEDDN--RLVPVQCSVSACVAVACGAEFSMWICGDDGKLL 181
Query: 124 GWGYNSYGQ------------AANEKSTYAWYPSPVDWCV---GEVRKLAAGGGHSAVLT 168
G YGQ ++ K Y P P+ ++ K+A+G H+ +
Sbjct: 182 SAGLPQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVD 241
Query: 169 D 169
D
Sbjct: 242 D 242
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Query: 28 LLPRRVVALDGIFIKDVACGG---VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
L P R+ L G+ I V CGG H A+ + G ++ WG + GQLGLG
Sbjct: 36 LEPTRIATLKGVSIAKV-CGGSAATHCMAIAADGRVFTWGRNETGQLGLG---------- 84
Query: 85 NESDTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
D R P V G+++V +CG SHT+V DG + WG N +GQ
Sbjct: 85 ---DVDNRAAPTEVKALAGIKVVDGSCGKSHTVVVTADGNAYAWGSNKHGQ 132
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 4 DIYTWGLGSVGQLGHCSL-----QSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SK 57
+ Y WG GQLG S+ + D L+P + + VACG + +
Sbjct: 121 NAYAWGSNKHGQLGVGSIARTKPKEDDNRLVPVQCSVSACVA---VACGAEFSMWICGDD 177
Query: 58 GALYAWGGCQAGQLGLGPQ---TRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHT 113
G L + G Q GQLG G + S + + + +PI + + VA GH+HT
Sbjct: 178 GKLLSAGLPQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHT 237
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ GK H WG+ YG+ ++ W P V+
Sbjct: 238 IAVDDQGKFHTWGFGGYGRLGHKVQKDEWTPKMVE 272
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3129 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3178
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3123 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3298 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + D+A GG H+ +T+ G L+ W
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 4170
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4171 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4228 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4269
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4270 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4223 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4280 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4321
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3018 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3070
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + ALT G +Y WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+ +G +Y+WG + G+LG G RS P
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4090
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G + WG YG+ + S P V
Sbjct: 4091 ES-LRGIEVVD-------IAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4143 EALQGYRVIDIACGSGDAQTL 4163
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4322 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4349
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3959 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4014
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4015 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSFEGEVYS 4067
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ V +L I +A G H AL++ G +++WG G+LG G +P E
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEE 538
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ V +ACG +++ +G+++ WG +YG+ + S P V
Sbjct: 539 PKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
G +V ++ G G + L
Sbjct: 599 TGLKGLKVIDVSCGSGDAQTL 619
>gi|407399996|gb|EKF28499.1| hypothetical protein MOQ_007751 [Trypanosoma cruzi marinkellei]
Length = 644
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 16/119 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV-ALDGIFIKDVACGGVHTCALTSKGAL 60
+++TWG+G G+LGH GDKE L+P +V AL G + DVACG HT ALT +GA+
Sbjct: 395 ELFTWGVGYQGRLGH-----GDKEPALVPTKVRGALTGQRVIDVACGSFHTVALTERGAV 449
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMR 118
Y WG +GQ G + + + +R + + V GV + ++CG HT+V M+
Sbjct: 450 YCWGDNASGQCGAKSSIDAVT-------SPYRVVNLEFVAGGVAKAISCGRQHTVVVMQ 501
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G+ G+LG L + + G+ + DVA G ++CAL+ G +Y +G
Sbjct: 150 LYSWGSGASGELGTQRFLDCSTPTLAQ--ITPFGVRVVDVALGANYSCALSEDGNIYTFG 207
Query: 65 GCQAGQLGLGPQTRSFSFIPNESD---TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
GQLGLG R P++ T + IP+ V L A G++ +
Sbjct: 208 NGDWGQLGLG-SARELDEHPDDKSAVVTVPQRIPLFEQNPAVHL-AAGYAFAMALTAGHH 265
Query: 122 IHGWGYNSYGQA 133
++ WG N++GQ+
Sbjct: 266 VYFWGNNNHGQS 277
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--------LLPRRVVALDGIFIKDVACGGVHTCALT 55
+IYT+G G GQLG S + D+ +P+R+ + +A G ALT
Sbjct: 202 NIYTFGNGDWGQLGLGSARELDEHPDDKSAVVTVPQRIPLFEQNPAVHLAAGYAFAMALT 261
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
+ +Y WG GQ GLGP+ +S E T + + VQL CG +L
Sbjct: 262 AGHHVYFWGNNNHGQSGLGPRYFDYSLRKVEEPTLVETLEGKRI---VQL-GCGSFFSLA 317
Query: 116 YMRDGKIHGWG 126
DG ++ WG
Sbjct: 318 LGDDGTLYSWG 328
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 5 IYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG + GQ G SL+ ++ P V L+G I + CG + AL G
Sbjct: 266 VYFWGNNNHGQSGLGPRYFDYSLRKVEE---PTLVETLEGKRIVQLGCGSFFSLALGDDG 322
Query: 59 ALYAWGGCQAGQLGLGPQTRSF---SFIPNESDTYFRNIPILV-----VPNGVQL--VAC 108
LY+WG + LG + R+ FI +ES + + +LV VP +L V
Sbjct: 323 TLYSWGLLECLGLGTTEEVRAAIDDPFIISESLSTEKRTVVLVPQIVHVPTEHKLIRVHA 382
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAV 166
G H+ V G++ WG G+ + A P+ V + V +A G H+
Sbjct: 383 GQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQRVIDVACGSFHTVA 442
Query: 167 LTD 169
LT+
Sbjct: 443 LTE 445
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V G H+ + + G L+ WG G+LG G + + +P + ++ V
Sbjct: 380 VHAGQWHSGVINTAGELFTWGVGYQGRLGHG--DKEPALVPTKVRGALTGQRVIDV---- 433
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS----TYAWYPSPVDWCVGEVRK-LA 158
ACG HT+ G ++ WG N+ GQ + S T + +++ G V K ++
Sbjct: 434 ---ACGSFHTVALTERGAVYCWGDNASGQCGAKSSIDAVTSPYRVVNLEFVAGGVAKAIS 490
Query: 159 AGGGHSAVL 167
G H+ V+
Sbjct: 491 CGRQHTVVV 499
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 26/167 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 3640 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 3696
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK-I 122
G G+LGLG +T + +P + VACG +HTL DG +
Sbjct: 3697 GNGDYGRLGLG-------------NTSNKKLP--------ERVACGLNHTLAVSADGSMV 3735
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G YG+ ST P VD G ++K+A G S LT
Sbjct: 3736 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 3782
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 476 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 532
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 533 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 579
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 580 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 628
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 3735 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3791
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL G +
Sbjct: 3792 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLALASTGDV 3839
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 3840 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 3886
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 581 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 635
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 636 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 678
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 679 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 732
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3536 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLAC 3589
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 3590 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 3634
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 3635 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3688
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 3590 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 3647 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 3696
Query: 126 GYNSYGQ 132
G YG+
Sbjct: 3697 GNGDYGR 3703
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 371 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 473
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 474 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 683 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 740
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 741 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 781
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+++
Sbjct: 4087 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSF 4143
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG-KI 122
G G+LGLG N S+ + + V VACG +HTL DG +
Sbjct: 4144 GNGDYGRLGLG----------NTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTV 4193
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G YG+ ST P VD G ++K+A G S LT
Sbjct: 4194 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4240
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A++ G LY
Sbjct: 473 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 529
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 530 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 576
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 577 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 625
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ ++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y
Sbjct: 4191 MTVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYT 4247
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
+G Q +GL P+ R+ + + +P L GV + VA G HTL G
Sbjct: 4248 FG--QDRLIGL-PEGRA------RNHNRPQQVPAL---TGVFIEDVAVGAEHTLTLSSTG 4295
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG NS GQ + + P+ + G+ +++++AG HSA T
Sbjct: 4296 DVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRCHSAAWT 4344
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 578 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 632
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 633 WGCGACLGCGSSEATALRPK-----LIEELATTRVVDISI------------GDSHCLAL 675
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 676 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWT 729
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4037 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4094 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFSF 4143
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G +V ++A G H+ ++
Sbjct: 4144 GNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVS 4187
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQL ++G L+P +A + V CG T + + G + A
Sbjct: 3983 DVFLWGAGRHGQLA----EAGRNILVP--TLAPSFSQAQQVVCGQNCTFVIQANGTVSAC 4036
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4037 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQMVTSCGSDGHSMA 4081
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4082 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T ++S G++ A
Sbjct: 368 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISSDGSVRAC 422
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R I + G HTL +
Sbjct: 423 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RAIKKVSSSKG------SDGHTLAFTS 470
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 471 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 523
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V+ LDG+ I+ ++ G H+ AL +
Sbjct: 680 EVYAWGNNSMGQCGQGN--STGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQV 737
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 738 VAWHRPYCVDLEESTFSHLRSFLERYCDGINNEIPPLPFPS 778
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 82/210 (39%), Gaps = 47/210 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH + E +P +V AL+ + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPA--ETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPILVV----------------------- 99
G + GQ G P+ + + D R P LVV
Sbjct: 117 GNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 100 ---PNG----------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
P G V+L+A G H L DG + WG N YGQ +
Sbjct: 177 QPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P PV G + +AAGG HS LTD
Sbjct: 237 RSQPIPVQGLSGLTLVDIAAGGWHSTALTD 266
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P V L G+ + D+A GG H+ ALT G +Y WG
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + +L + VQL +CG +H++ +DG++
Sbjct: 275 RGEHGRLGFGDNDKSSKMVP-------QKVNLLAGEDIVQL-SCGGTHSVALTQDGRMFS 326
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
+G +G+ K P V
Sbjct: 327 FGRGDHGRLGYGKKVTTGQPVEV 349
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H + WG G GQLG + +++ V AL+ ++ V G ++ A+ G L+
Sbjct: 4 HTSLIAWGAGEDGQLG---IGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMR 118
WG Q G LG + ++T NIP V N V +V A G H L
Sbjct: 61 TWGWNQRGTLG------------HPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDD 108
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGE-------VRKLAAGGGHSAVLT 168
G+ + WG N YGQ E + D + + VR++AAGG HS VLT
Sbjct: 109 QGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLT 167
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P++V L G I ++CGG H+ ALT G ++++
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSK-MVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSF 327
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---------LVACGHSHTL 114
G G+LG G + + + +D IP +G + LVACG HTL
Sbjct: 328 GRGDHGRLGYGKKVTTGQPVEVPTD-----IPPPKSLSGTEEAEGHWIAKLVACGGRHTL 382
Query: 115 VYMR 118
+
Sbjct: 383 AIVE 386
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++++G GQLGH ++ ELLP+ + ++ + IK +ACG H+ L+ G +Y WG
Sbjct: 111 LFSFGCNEDGQLGHVDKEN---ELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG + + +P + L V V+CG+ HT + RDG ++
Sbjct: 168 NNNEGQLGLGEEVE--NSLPKK----------LKFKKEVVSVSCGYYHTALVTRDGFLYT 215
Query: 125 WGYNSYGQ 132
+G N G+
Sbjct: 216 FGENELGK 223
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
DG+ ++ACG H+ +T G LY +G GQLGLG T+S N P
Sbjct: 38 DGVV--EMACGDEHSAVVTESGRLYVFGSNDWGQLGLG-HTKSL------------NKPS 82
Query: 97 LVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 152
V P V+ VACG +HT+VY GK+ +G N GQ + P ++
Sbjct: 83 FVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQM 142
Query: 153 EVRKLAAGGGHSAVLTD 169
E++++A G HS +L++
Sbjct: 143 EIKQIACGTYHSIILSE 159
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G +G+LG S Q + + + D V+CG HT A+T +G YAWG
Sbjct: 213 LYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWG 272
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + NE + I L + V+CG SHT V GK+
Sbjct: 273 DGSQGQLGHGTKLLEV----NEP----KQIKKLSGQKCIS-VSCGESHTAVVTESGKVFT 323
Query: 125 WGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL 167
+G +G+ + +++ PV + V ++ GG H+ VL
Sbjct: 324 FGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVL 369
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG + GQLG L + LP+++ + V+CG HT +T G LY +
Sbjct: 162 DVYVWGNNNEGQLG---LGEEVENSLPKKLKFKKEVV--SVSCGYYHTALVTRDGFLYTF 216
Query: 64 GGCQAGQLGLGPQTRSFSFIPN------ESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G + G+LGL S + +P ++D Y V+CG HT+
Sbjct: 217 GENELGKLGLSSSQLSNTTVPQSVAMPADNDEYIS-------------VSCGARHTVAIT 263
Query: 118 RDGKIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ G + WG S GQ + K P + G+ ++ G H+AV+T++
Sbjct: 264 KQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTES 318
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 159
+GV +ACG H+ V G+++ +G N +GQ + PS V E VRK+A
Sbjct: 38 DGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVAC 97
Query: 160 GGGHSAVLTDACSL 173
G H+ V +++ L
Sbjct: 98 GRNHTIVYSESGKL 111
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD---VACGGVHTCALTSKGALY 61
+++WGL S GQLG+ +L + + A+ + + D ++ G H+ AL + GA+
Sbjct: 175 VWSWGLNSSGQLGNGTLAT--------QSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDG 120
+WG GQLG G T S S P+ V N ++ +A G +H+L DG
Sbjct: 227 SWGANTYGQLGNGTTTTSAS-------------PVGVSGLNNIKSLAAGGNHSLALKSDG 273
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+ WGYN+YGQ N + P V G V ++AG HS
Sbjct: 274 TVTAWGYNAYGQVGNGATANVLSPIAVSTLSG-VTAVSAGVSHS 316
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ+G + + L P ++ L GI VA G H+ AL + G ++AWG
Sbjct: 376 VWAWGSNTYGQIGDGTPL---RRLTPVQLSTLTGIIA--VAAGANHSLALAANGTVFAWG 430
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G T R++P V PN G+ +A G +H+L DG +
Sbjct: 431 RNNHGQLGDGSTTN-------------RSLPTQV-PNLTGIVALAAGATHSLALRFDGTV 476
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+ WG N GQ +E T P V + +V ++AG HS
Sbjct: 477 YAWGRNHLGQLGDETCTDRLSPVAVHYLE-KVVAISAGDNHS 517
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIF-----IKDVACGGVHTCALTSKG 58
+++WG LG+ S + + LP +V + GI + +A G HT AL S G
Sbjct: 117 VWSWGYNGNSALGNASPAT---QKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNG 173
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+++WG +GQLG G + + N+ V ++ G +H+L
Sbjct: 174 TVWSWGLNSSGQLGNG------TLATQSAAVQAVNLTDAVA------ISAGAAHSLALRA 221
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G + WG N+YGQ N +T + P V + ++ LAAGG HS L
Sbjct: 222 NGAVVSWGANTYGQLGNGTTTTSASPVGVS-GLNNIKSLAAGGNHSLAL 269
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WGL + G LG+ + P ++ G+ + VA G HT + G ++AWG
Sbjct: 326 IWGWGLNTYGGLGN---NTKVNRSTPGTILLTSGL--QGVAGGAQHTIYVKGDGTVWAWG 380
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQ+G G R R P+ L G+ VA G +H+L +G +
Sbjct: 381 SNTYGQIGDGTPLR-------------RLTPVQLSTLTGIIAVAAGANHSLALAANGTVF 427
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N++GQ + +T P+ V G V LAAG HS L
Sbjct: 428 AWGRNNHGQLGDGSTTNRSLPTQVPNLTGIV-ALAAGATHSLAL 470
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 45/202 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG + GQLG+ + + P V L+ I K +A GG H+ AL S G + AWG
Sbjct: 225 VVSWGANTYGQLGNGTTTTSAS---PVGVSGLNNI--KSLAAGGNHSLALKSDGTVTAWG 279
Query: 65 GCQAGQLGLGPQTRSFSFIPNES-----------------------------DTY----- 90
GQ+G G S I + +TY
Sbjct: 280 YNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339
Query: 91 ----FRNIP-ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
R+ P +++ +G+Q VA G HT+ DG + WG N+YGQ + P
Sbjct: 340 NTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPV 399
Query: 146 PVDWCVGEVRKLAAGGGHSAVL 167
+ G + +AAG HS L
Sbjct: 400 QLSTLTG-IIAVAAGANHSLAL 420
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG +GQLG ++ L P V L+ + ++ G H+ A+ G +AWG
Sbjct: 476 VYAWGRNHLGQLGD---ETCTDRLSPVAVHYLEKVVA--ISAGDNHSLAIHQNGTAFAWG 530
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQL + S F P IP +V G+ A G +HTL+ +G
Sbjct: 531 SDEHGQL-CDSGSGSGRFSP-----LISQIPGIVKGIGI---AAGANHTLLLEANGTAWA 581
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G N YGQ + +T P P+ R LAAGG SA LT
Sbjct: 582 CGDNLYGQLGDGTTTDKSAPVPITTLTNAAR-LAAGGNTSAALT 624
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A GG + ALT+ G + WG +GQLG + P Y P + V +GV
Sbjct: 613 LAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTVY----PTVEVFSGV 668
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ G +H DG +H WG N GQ
Sbjct: 669 ASLGAGTAHLTAVKTDGYVHSWGLNDSGQ 697
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
G+LG+ + L P +V L G+ VA G H+ AL S G ++AWG G LG
Sbjct: 26 GELGNGT---ATDSLSPVQVSNLTGVI--SVAAGYYHSLALKSDGTVWAWGLNTYGNLG- 79
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
++ T R P+ V+ GV +A + + DG + WGYN
Sbjct: 80 ------------DNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWSWGYNGNSA 127
Query: 133 AANEKSTYAWYPSPVDWCVG-------EVRKLAAGGGHSAVL 167
N P+ V G +V +AAG H+ L
Sbjct: 128 LGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLAL 169
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
HT A+ G ++A G G+LG G T S S + + T GV VA G
Sbjct: 7 HTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLT------------GVISVAAG 54
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ H+L DG + WG N+YG + +T P V
Sbjct: 55 YYHSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQV 92
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 69/173 (39%), Gaps = 24/173 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK-DVACGGVHTCALTSKGALYAWG 64
+ WG GQL C SG P + + GI +A G HT L + G +A G
Sbjct: 527 FAWGSDEHGQL--CDSGSGSGRFSPL-ISQIPGIVKGIGIAAGANHTLLLEANGTAWACG 583
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + +PI + N +L A G++ + +G +
Sbjct: 584 DNLYGQLGDGTTTDKSA-----------PVPITTLTNAARLAAGGNT-SAALTTNGTVST 631
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCV-------GEVRKLAAGGGH-SAVLTD 169
WG NS GQ + + +PV V V L AG H +AV TD
Sbjct: 632 WGLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTD 684
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2772 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2828
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2829 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2878
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 2879 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 2927
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTE 727
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2823 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2937
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 2938 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2997
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 2998 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3029
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR V +L G + D+A GG H+ +TS G LY W
Sbjct: 3738 EVYSWGEAEDGKLGHGNRSPCDR---PRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTW 3794
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V VACG + TL
Sbjct: 3795 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 3841
Query: 119 DGKIHGWGYNSYGQ 132
D + WG YG+
Sbjct: 3842 DDTVWSWGDGDYGK 3855
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 40/198 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
D+YTWG G G+LGH + +L P+ V AL G + DVACG T LT ++
Sbjct: 3790 DLYTWGKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 3846
Query: 62 AWGGCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVV--------------- 99
+WG G+LG G P S T + P L V
Sbjct: 3847 SWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDD 3906
Query: 100 ----PNGVQ--------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
P VQ +A G H + +G+++ WG N GQ + + P V
Sbjct: 3907 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3966
Query: 148 DWCVG-EVRKLAAGGGHS 164
G +V ++A G H+
Sbjct: 3967 AALQGRKVNRVACGSAHT 3984
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G + G+LG + SG + PR+V AL +K VA GG H ALT G +++
Sbjct: 2717 VYACGEATNGRLG-LGMSSGTVPI-PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 2774
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG FS + + + ++ +ACG SH+ G++
Sbjct: 2775 WGEGDDGKLG------HFSRMNCDKPRLIEALKT----KRIRDIACGSSHSAALTSSGEL 2824
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + +T P V +G V ++A G + LTD
Sbjct: 2825 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
L +G++ WG YG+
Sbjct: 618 PLAVTDNGQVWSWGDGDYGK 637
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGNNDQCQ 741
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVV 3764
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R ++ +A G +H+ G ++ WG YG+ + S P V
Sbjct: 3765 ES-LRGTEVVD-------IAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3816
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3817 EALQGHRVVDVACGSGDAQTL 3837
Score = 43.1 bits (100), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
G G +LGH S D PR+V L G + +A G +H T +G +Y WG
Sbjct: 3893 GKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDE 3949
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 3950 GQLGDG-------------TTNAIQRPRLVAALQGRKVNRVACGSAHTLAW 3987
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P L + + VA G A+T +G +YA G G+LGLG + + IP +
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVP-IPRQVT 2744
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ V V G H DGK+ WG G+ + P ++
Sbjct: 2745 ALSSYVVKKVA------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2798
Query: 149 WC-VGEVRKLAAGGGHSAVLTDACSL 173
+R +A G HSA LT + L
Sbjct: 2799 ALKTKRIRDIACGSSHSAALTSSGEL 2824
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3633 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3688
Query: 65 GCQAGQLGLGPQTRSFS---FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G AG T S S + + + R + V G H L +G+
Sbjct: 3689 GYGAGGRLGVGGTESVSAPTLLESIQHVFIRKV----------AVNSGGKHCLALSSEGE 3738
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG G+ + + P V+ G EV +AAGG HSA +T A L
Sbjct: 3739 VYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDL 3791
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G + VACG HT A TSK A
Sbjct: 3940 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGRKVNRVACGSAHTLAWSTSKPA 3993
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQPL 619
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 535 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 591
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 592 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 641
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 642 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 690
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 586 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 640
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E +NI L GV + CG +L +
Sbjct: 641 VFSWGDGDFGKLGRG---------GSEGCNIPQNIERL-NGQGVCQIECGAQFSLALTKS 690
Query: 120 GKIHGWG 126
G + WG
Sbjct: 691 GVVWTWG 697
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 424 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 480
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 481 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 533
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 534 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 587
>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 488
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L + WGL G C S D EL P V +L GI I++VA G HT +S G +YA
Sbjct: 332 LLTFGWGL-----YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYA 386
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
+GG Q GQLG G ++++T + +L PN V+ ++CG HT V
Sbjct: 387 FGGNQFGQLGTG---------CDQAETLPK---LLEAPNLENVNVKTISCGARHTAVITD 434
Query: 119 DGKIHGWGYNSYGQ 132
+G++ WG+N YGQ
Sbjct: 435 EGRVFCWGWNKYGQ 448
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF-- 82
D LP V G+ I VA GG HT AL+ G ++ WG GQLGLG + R S
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPH 279
Query: 83 -IP-NESDTYFR------NIPIL-----VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNS 129
IP E +Y + N+ + V+ + V+ +ACG H+ V G + +G+
Sbjct: 280 PIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 339
Query: 130 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
YGQ + P+ V +G + ++AAG H+
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 20/116 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+Y +G GQLG Q+ E LP+ + A L+ + +K ++CG HT +T +G ++
Sbjct: 383 DVYAFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVF 439
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLV 115
WG + GQLG+G D RN P V + +ACG HTL+
Sbjct: 440 CWGWNKYGQLGIG-------------DVIDRNAPAEVRIKDCFPKNIACGWWHTLL 482
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 38 GIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
G ++K +ACGG H+ +T GAL +G GQ G G S S R
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR----- 364
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---V 154
++ VA G HT DG ++ +G N +GQ P ++ E V
Sbjct: 365 -----IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNV 419
Query: 155 RKLAAGGGHSAVLTD 169
+ ++ G H+AV+TD
Sbjct: 420 KTISCGARHTAVITD 434
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 3054 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3110
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3111 LGEYGRLGHG---------DNATQLRPKLVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3160
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3161 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3209
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + P V AL G+ + DVACG T A+T G ++
Sbjct: 557 ELYTWGRGNYGRLGHGS---SEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 613
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ + D + V CG ++ +D
Sbjct: 614 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCGSQFSVALTKD 661
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + +P +D G +V +A G H LTD
Sbjct: 662 GQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 712
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G+ + D+A GG H+ +T+ G L+ W
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4103
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + + V VACG + TL D
Sbjct: 4104 GKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4153
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4154 VWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKS 4203
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3105 ELYSWGLGEYGRLGH-----GDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3219
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3220 YFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3279
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3280 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3311
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4154 VWSWGDGDYGKLGRGG---SDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWG 4210
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4211 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4252
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4253 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4301
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L + I V CG + ALT G +Y WG
Sbjct: 612 VWSWGDGDYGKLGRGG---SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 668
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R +L G ++ VA G +H L DG++
Sbjct: 669 KGDNQRLGHG------------TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEV 716
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 717 HSWGSNDKLQ 726
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P + A +G + +ACG ++ +T
Sbjct: 501 EVFSWGCGDGGRLGH-----GDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITID 555
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + + P+LV G+++ VACG +
Sbjct: 556 GELYTWGRGNYGRLGHG-------------SSEDQTTPMLVTALKGLKVVDVACGSGDAQ 602
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 603 TLAVTENGQVWSWGDGDYGK 622
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4206 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4262
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4263 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4304
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2943 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2999
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3000 YACGEATNGRLGLGLSSGTIP-IPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 3052
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3053 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3106
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4016 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4069
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++V A G +H+ G++ WG YG+ + S P
Sbjct: 4070 PRVIESL------RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK 4123
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
VD G V +A G G + L
Sbjct: 4124 LVDALQGHRVIDVACGSGDAQTL 4146
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-- 105
G H AL+S G +++WG G+LG G TY ++ NG Q
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHG------------DATYLEEPTMIAAFNGKQAGK 537
Query: 106 ----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 160
+ACG +++ V DG+++ WG +YG+ + S P V G +V +A G
Sbjct: 538 HVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACG 597
Query: 161 GGHSAVL 167
G + L
Sbjct: 598 SGDAQTL 604
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
++YTWG GQLG + + + PR V AL G I VACG HT A
Sbjct: 4257 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 4303
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3942 IYGWGHNHRGQLGGIE---GAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3997
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3998 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIRKVA--VNSGGKHCLALSSEGEVYS 4050
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T + L
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGEL 4100
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 39 QFFTWGKNSHGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 96
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 97 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 146
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ + P V +G EV ++A G H+ + L
Sbjct: 147 TFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 197
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 21 LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
+ + D +PR + L+ I V+CG H AL + G + WG GQLGLG +
Sbjct: 1 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---- 56
Query: 81 SFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
F S R++ G+ L VA G +H+ G + GWG N+ GQ
Sbjct: 57 -FPSQTSPQRVRSL------EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 109
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDA 170
P V +V ++ G H+AVLT +
Sbjct: 110 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 145 VFTFGAGSCGQLGHGSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 202 GCGARGQLGTG 212
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 93 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 149
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG G N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 150 AGSCGQLGHGSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 199
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G + GQ + PSPV
Sbjct: 200 AFGCGARGQLGTGHTCNVKCPSPVK 224
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR+V AL I+DVACG H+ A++S+G LY WG
Sbjct: 3182 VFSWGEGEDGKLGHGNRTTLDK---PRQVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3238
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + L VQ VACG + TL DG +
Sbjct: 3239 LGEYGRLGHG---------DNATQLKPKLVAALAGRRVVQ-VACGSRDAQTLALTEDGAV 3288
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3289 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRA 3337
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3233 ELYTWGLGEYGRLGH-----GDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGA 3287
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S P+E + I GV + CG +L R
Sbjct: 3288 VFSWGDGDFGKLGRG--GSEGSDTPHEIE-RLSGI-------GVIQIECGAQFSLALTRA 3337
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TD+
Sbjct: 3338 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDS 3389
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L G+ + D+ACG H+ A+T+ G + W
Sbjct: 4331 EVYAWGEGEDGKLGHGNRVSYDR---PKLVEHLHGMSVADIACGSAHSAAITASGQVLTW 4387
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4388 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4437
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4438 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4487
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4437 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4493
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4494 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4541
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4542 VYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++ TWG G+ +LGH + D LP V AL + DVA G H+ ALTS+G ++
Sbjct: 703 NLLTWGRGTYARLGHGN---SDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVF 759
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ + G +++ +
Sbjct: 760 AWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQRIFAGSQYSVALSSE 805
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 806 GQVYTWG 812
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3339 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYA 3394
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3395 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDDVFVNRVACGSSHSIAW 3438
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y+WG G +LGH + +P ++ AL+ ++ V CG ++ +T G L W
Sbjct: 651 NAYSWGAGEDHRLGHGDTHA---RAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTW 707
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVYMR 118
G +LG G N D R +P LV V G +H+L
Sbjct: 708 GRGTYARLGHG----------NSDD---RCLPTLVAALAEHTVVDVALGSGDAHSLALTS 754
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+G + WG YG+ N + P V+ + V+++ AG +S L+
Sbjct: 755 EGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRIFAGSQYSVALS 803
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4295 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRV----- 4349
Query: 83 IPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV V +ACG +H+ G++ WG YG+ + S
Sbjct: 4350 ------SYDR--PKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSE 4401
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4402 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4430
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3344
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3345 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQV 3392
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3393 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDDVFVNRVACGSSHS 3435
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++ G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3128 VFACGEGTNGRLG---LGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3184
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R+ P + + + ++ VACG SH+ G++
Sbjct: 3185 WGEGEDGKLGHG--NRTTLDKPRQVEA--------LRAKKIRDVACGSSHSAAISSQGEL 3234
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 3235 YTWGLGEYGR 3244
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ +G ++A G
Sbjct: 3076 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACG 3132
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3133 EGTNGRLGLG--VTYNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3184
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAIS 3229
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 1 MHLDIYTWGLGS--VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D W GS GQLG+ + + PR V L VA GG H AL + G
Sbjct: 135 LHADGTVWACGSNSAGQLGNGTTAA---RSAPRPVPGLSRAVA--VAAGGSHALALCADG 189
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYM 117
++AWG GQLG G T R P+ V GV VA G+ H+L
Sbjct: 190 TVWAWGNNGYGQLGNG-------------STAHRATPVQVPGLQGVVAVAGGYMHSLALC 236
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WG+N YGQ N + ++ P PV + +V +AAGG HS L
Sbjct: 237 ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVP-GLSQVVSVAAGGFHSLAL 285
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GQLG+ S S + P V L + VA GG+H+ A+ + G ++AW
Sbjct: 340 SLWSWGNNYSGQLGNGSFSSSAR---PAPVQGLGAV--TSVAAGGMHSVAVQADGTVWAW 394
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG R+ E T R +P L G VA G H+L G +
Sbjct: 395 GRNEEGQLG---HERA-----PERATPVR-VPGL---QGEVAVAAGFYHSLSVQAGGSLW 442
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
WG N +GQ + ++ P+P W G+ R
Sbjct: 443 AWGLNDFGQLGDSEAPLMPVPAP-GWAQGKAR 473
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ G P V + VA GG H+ AL + G ++AWG
Sbjct: 241 VWAWGFNDYGQLGN-----GTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 295
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG E+ + R P V V VA G H+L G +
Sbjct: 296 NNGFGQLG-------------EAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLW 342
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ N + + P+PV +G V +AAGG HS +
Sbjct: 343 SWGNNYSGQLGNGSFSSSARPAPVQ-GLGAVTSVAAGGMHSVAV 385
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 727
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 516 EVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4038 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4094
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4095 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4136
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4137 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4090 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4146
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4147 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4188
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N + V V G H + DG
Sbjct: 3015 YACGEATNGRLGLGISSGTVP-IPRQI-TALSNYVVKKV-----AVHSGGRHAMALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3121
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4141 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4188
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4189 STSKPANAGKLP-----TQVPMEYN-HLQEIPII 4216
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 32 RVVALDGIFIKDVACGG--VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
+V AL G + D+ACG T LT +++WG G+LG G +P + D+
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDS 4065
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ GV V CG ++ + G ++ WG Y + + + P V
Sbjct: 4066 --------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 4117
Query: 150 CVG-EVRKLAAGGGH 163
G +V +A G H
Sbjct: 4118 LQGKKVIAIATGSLH 4132
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 17 GHCSLQSGDKELL-PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGL 73
G +Q+ + + L P+ V L I +A G H AL + G +++WG G+LG
Sbjct: 471 GRVYMQAYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGH 530
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
G +P E + V +ACG +++ +G+++ WG +YG+
Sbjct: 531 G------DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRL 584
Query: 134 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ S P V G +V ++ G G + L
Sbjct: 585 GHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
>gi|154339233|ref|XP_001562308.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062891|emb|CAM39338.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1720
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG+GS G+LGH + S E PR V L F+ D +C VH+ LTS GA+Y +
Sbjct: 784 EVYTWGVGSNGRLGHGTDSS---EAKPRLVEGLRSSFVVDASCSHVHSAVLTSTGAVYVF 840
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKI 122
GG GQLGL R + R +P +V +P V C HT + + DG +
Sbjct: 841 GGNAEGQLGL----RGLA---------PRRLPTMVPLPIKAVAVMCAREHTCILLADGDV 887
Query: 123 HGWG 126
G
Sbjct: 888 VACG 891
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF--IPNESDTYFRNIPILV 98
+ +ACG T +T G LY+ G GQLG+G ++ ++ + F++
Sbjct: 593 VAQIACGLAVTYVVTVDGVLYSCGRADNGQLGIGGRSMRYAHAGVSKLQRVLFKDN---- 648
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V +A G + + RD ++ WG+N YGQ
Sbjct: 649 --ERVTRIAAGTACAVALTRDNALYCWGHNVYGQ 680
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P RV L I VA G H A+T+ +++AWG G LG G + + + P S
Sbjct: 1122 VPIRVAGLRDIVA--VAAGCRHAVAMTASCSVFAWG---VGVLGTG--SNADTTDPASSA 1174
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-----AANEKSTYAWY 143
+ + + ++ + CG ++ +G++ WG N +G+ + + ST +
Sbjct: 1175 SVVLTPVRVALSQTIRSIGCGPHNSFAINDEGELWVWGMNKFGECGIPTSGDSISTSSGG 1234
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVLT 168
+ D G+ + A GH+ V+T
Sbjct: 1235 GALQDLAAGQKQGSDAAVGHANVIT 1259
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 3065 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3121
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3122 LGEYGRLGHG---------DNTTQLRPKLVKVLLGHRVIQ-VACGSRDAQTLALTDEGFV 3171
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3172 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 3220
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + P V A G+ + DVACG T A+T G ++
Sbjct: 562 ELYTWGRGNYGRLGHGS---SEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVW 618
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ + D + V CG ++ +D
Sbjct: 619 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCGSQFSVALTKD 666
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP +D G +V +A G H LTD
Sbjct: 667 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTD 717
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3116 ELYSWGLGEYGRLGH-----GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3230
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3231 YFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3290
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3291 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3322
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G+ + D+A GG H+ +T+ G L+ W
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4114
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + + V VACG + TL D
Sbjct: 4115 GKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4164
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 VWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKS 4214
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4165 VWSWGDGDYGKLGRGG---SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4221
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4222 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4263
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4264 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + +G + VACG ++ A+T+
Sbjct: 506 EVFSWGCGDGGRLGH-----GDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITAD 560
Query: 58 GALYAWGGCQAGQLGLGP---QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
G LY WG G+LG G QT T F+ + ++ V G G + TL
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDQTTPMVV------TAFKGLKVVDVACG-----SGDAQTL 609
Query: 115 VYMRDGKIHGWGYNSYGQ 132
+G++ WG YG+
Sbjct: 610 AVTENGQVWSWGDGDYGK 627
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2954 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 3010
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + T N I V V G H + DG
Sbjct: 3011 YACGEATNGRLGLGLSSGTIP-IPRQI-TALSNYVIKKVA-----VHSGGRHAMALTVDG 3063
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3064 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3117
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4217 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4274 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4315
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L + I V CG + ALT G +Y WG
Sbjct: 617 VWSWGDGDYGKLGRGG---SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 673
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R +L G ++ VA G +H L DG++
Sbjct: 674 KGDNQRLGHG------------TDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEV 721
Query: 123 HGWGYNSYGQ 132
WG N Q
Sbjct: 722 LSWGSNDKLQ 731
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI+ VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4080
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++V A G +H+ G++ WG YG+ + S P
Sbjct: 4081 PRVIESL------RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK 4134
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
VD G V +A G G + L
Sbjct: 4135 LVDALQGHRVIDVACGSGDAQTL 4157
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-- 105
G H AL+S G +++WG G+LG G TY ++ NG Q
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG------------DTTYLEEPKMIGTFNGKQAGK 542
Query: 106 ----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 160
VACG +++ DG+++ WG +YG+ + S P V G +V +A G
Sbjct: 543 HVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACG 602
Query: 161 GGHSAVL 167
G + L
Sbjct: 603 SGDAQTL 609
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4268 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAW 4315
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+ G P + +P E + + + IPI+ + N + L+
Sbjct: 4316 STSKPTNAGKLP-----AQVPMEYN-HLQEIPIMALRNRLVLL 4352
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3953 IYGWGHNHRGQLGGIE---GAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4008
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4009 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIRKVA--VNSGGKHCLALSSEGEVYS 4061
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG G+ + + P ++ G EV +AAGG HSA +T
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4106
>gi|326436506|gb|EGD82076.1| hypothetical protein PTSG_02757 [Salpingoeca sp. ATCC 50818]
Length = 1731
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSL--QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+YTWG G+LG ++ ++G ++ V+ + + VACG HT TS+G ++
Sbjct: 1122 DLYTWGKALGGRLGQGAIVEEAGQGSVMRVEVLHMFRAKVFGVACGAEHTVVRTSQG-VF 1180
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMR 118
+WG GQLGLG T R P LV+ + V CGH HTL M
Sbjct: 1181 SWGNNDMGQLGLG-------------HTSSRVQPELVMDLKSTRIDYVVCGHFHTLA-MA 1226
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 167
+ GWG N+YGQ A + P + D + L+AG H+ L
Sbjct: 1227 GSSVWGWGANTYGQLAMSGVSTVTSPRLIRDMSRRRIVSLSAGATHTVAL 1276
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 33/182 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQL + + PR + + I ++ G HT AL + GA Y+ G
Sbjct: 1230 VWGWGANTYGQLAMSGVSTVTS---PRLIRDMSRRRIVSLSAGATHTVALAADGAAYSCG 1286
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQL L +P T R IPI + V+LVACG T V G +
Sbjct: 1287 CGLYGQLMLAD-------LPKR-QTDLRRIPI---DDPVRLVACGPYQTAVVTVGGALVF 1335
Query: 125 WGYNSYG--------QAANEKSTYAWYPS---------PVDWCVGEVRKLAAGGGHSAVL 167
G + + +A E+ + +P+ P+D+ G + K+ H +L
Sbjct: 1336 SGRSIFDRRPIPTDHRAIKEQRSAKPHPAHLKPIRLPLPIDF--GSLAKVRISLHHVLLL 1393
Query: 168 TD 169
+D
Sbjct: 1394 SD 1395
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG +GQLG L + P V+ L I V CG HT A+ + +++ WG
Sbjct: 1179 VFSWGNNDMGQLG---LGHTSSRVQPELVMDLKSTRIDYVVCGHFHTLAM-AGSSVWGWG 1234
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQL + G T + + D R I L + G +HT+ DG +
Sbjct: 1235 ANTYGQLAMSGVSTVTSPRLIR--DMSRRRIVSL---------SAGATHTVALAADGAAY 1283
Query: 124 GWGYNSYGQ---AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G YGQ A K P+D VR +A G +AV+T
Sbjct: 1284 SCGCGLYGQLMLADLPKRQTDLRRIPID---DPVRLVACGPYQTAVVT 1328
>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
vinifera]
Length = 484
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L ++ WGL G C S D EL P V +L GI I+ VA G HT +++ G +Y
Sbjct: 328 LLMFGWGL-----YGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYT 382
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGK 121
+GG Q GQLG G ++ +T R + + N ++V+CG H+ + DGK
Sbjct: 383 FGGNQFGQLGTG---------VDQPETLPRLLDAPSLENAHAKIVSCGARHSAIITADGK 433
Query: 122 IHGWGYNSYGQ 132
+ WG+N YGQ
Sbjct: 434 MFSWGWNKYGQ 444
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+YT+G GQLG Q E LPR + A L+ K V+CG H+ +T+ G ++
Sbjct: 379 DVYTFGGNQFGQLGTGVDQ---PETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMF 435
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLV 115
+WG + GQLGLG D RNIP V +G + VACG HTL+
Sbjct: 436 SWGWNKYGQLGLG-------------DVVDRNIPSQVTLDGCTPKNVACGWWHTLL 478
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 23 SGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
SGD+ L LP V G+ I +VA GG HT AL+ G ++ WG GQLGLG + R
Sbjct: 209 SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMV 268
Query: 81 SF---IP-NESDTYFR---------NIPI----LVVPNG-VQLVACGHSHTLVYMRDGKI 122
S +P ES +Y + N+ L VP V+ +ACG H+ V G +
Sbjct: 269 SSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGAL 328
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G+ YGQ + P+ V +G ++ ++AAG H+ ++
Sbjct: 329 LMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCIS 375
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P V LD + + D+A GG H+ ALT KG +Y WG
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN--------LLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 77/209 (36%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E +P +V AL + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPP--ETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGP-------QTRSFSFIPNE------------------------------- 86
G + GQ G P R IP
Sbjct: 117 GNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D +IP+ V V+L+A G H L +G + WG N YGQ +
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPR 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P PV + +AAGG HS LTD
Sbjct: 237 SQPIPVQGLDSLTLVDIAAGGWHSTALTD 265
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG L + D++ V AL+ ++ V G ++ A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ + IP++ N+ I+ A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTEN-IPSQVKA-LANVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLT 166
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P RV L+ + + +A G H AL G L+AWG + GQLG G D
Sbjct: 188 IPVRVQGLENVRL--IAVGAFHNLALEENGTLWAWGNNEYGQLGTG-------------D 232
Query: 89 TYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKSTYAW 142
T R+ PI V + + LV A G H+ G+++GWG +G+ N+KS+
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKM- 291
Query: 143 YPSPVDWCVGE-VRKLAAGGGHSAVLT 168
P V+ GE + +++ GG HS LT
Sbjct: 292 LPQKVNLLAGEDIIQVSCGGTHSVALT 318
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K +LP++V L G I V+CGG H+ ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---------------LVAC 108
G G+LG G + + + ++P+ + P Q +VAC
Sbjct: 327 GRGDHGRLGCGRKVTTGQPL---------DVPVKIPPPEGQFNDAAEDDDGKWVAKVVAC 377
Query: 109 GHSHTLVYM 117
G HTL +
Sbjct: 378 GGRHTLAIV 386
>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L ++ WGL G C S D EL P V +L GI I+ VA G HT +++ G +Y
Sbjct: 305 LLMFGWGL-----YGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYT 359
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGK 121
+GG Q GQLG G ++ +T R + + N ++V+CG H+ + DGK
Sbjct: 360 FGGNQFGQLGTG---------VDQPETLPRLLDAPSLENAHAKIVSCGARHSAIITADGK 410
Query: 122 IHGWGYNSYGQ 132
+ WG+N YGQ
Sbjct: 411 MFSWGWNKYGQ 421
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
D+YT+G GQLG Q E LPR + A L+ K V+CG H+ +T+ G ++
Sbjct: 356 DVYTFGGNQFGQLGTGVDQ---PETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMF 412
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLV 115
+WG + GQLGLG D RNIP V +G + VACG HTL+
Sbjct: 413 SWGWNKYGQLGLG-------------DVVDRNIPSQVTLDGCTPKNVACGWWHTLL 455
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 23 SGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
SGD+ L LP V G+ I +VA GG HT AL+ G ++ WG GQLGLG + R
Sbjct: 186 SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSRIRMV 245
Query: 81 SF---IP-NESDTYFR---------NIPI----LVVPNG-VQLVACGHSHTLVYMRDGKI 122
S +P ES +Y + N+ L VP V+ +ACG H+ V G +
Sbjct: 246 SSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGAL 305
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+G+ YGQ + P+ V +G ++ ++AAG H+ ++
Sbjct: 306 LMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCIS 352
>gi|452824384|gb|EME31387.1| hypothetical protein Gasu_13510 [Galdieria sulphuraria]
Length = 436
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 5 IYTWGLG-SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +WGL S GQLG + S D P VV I ++ V CG H+ L G+++
Sbjct: 212 VLSWGLSDSFGQLGRGQVTSEDNCETPGVVVVPKDIRVQKVCCGDAHSAFLMEDGSVWTC 271
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G Q QLG + P + +R P V G ++ +ACG HTL+ ++DG
Sbjct: 272 GSNQWLQLGNKEE-------PWKDGNDYRPTPQRVQGIGQRVATDIACGAHHTLILIKDG 324
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC----VGEVRKLAAGGGHSAVLTDACSLKEL 176
++ G+ +GQ + Y S + W G +R +AAG HS ++T L L
Sbjct: 325 TVYSCGFGRWGQLGHHNYAQLSYLSRISWLDGLRNGRIRDIAAGSNHSCLVTTDGKLYSL 384
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKDVACGGVHTCALTSKGALY 61
+Y+ G G GQLGH + + R+ LDG+ I+D+A G H+C +T+ G LY
Sbjct: 326 VYSCGFGRWGQLGH---HNYAQLSYLSRISWLDGLRNGRIRDIAAGSNHSCLVTTDGKLY 382
Query: 62 AWGGCQAGQLGLGPQTRSFSFIP 84
+ G AGQLG+G T S IP
Sbjct: 383 SLGANFAGQLGIG--TLQPSAIP 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQA-GQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
+ + CG H ALT +G + +WG + GQLG G T S+ ++VV
Sbjct: 193 VDHIHCGKSHCLALTKQGVVLSWGLSDSFGQLGRGQVT---------SEDNCETPGVVVV 243
Query: 100 PNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA----WYPSP 146
P VQ V CG +H+ M DG + G N + Q N++ + + P+P
Sbjct: 244 PKDIRVQKVCCGDAHSAFLMEDGSVWTCGSNQWLQLGNKEEPWKDGNDYRPTP 296
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 4177 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4233
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG-KI 122
G G+LGLG N S+ + V VACG +HTLV DG +
Sbjct: 4234 GNGDYGRLGLG----------NTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMV 4283
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G YG+ ST P VD G ++K+A G S LT
Sbjct: 4284 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4330
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A++ G LY
Sbjct: 485 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 541
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 542 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 588
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G +RK+ AG S LT
Sbjct: 589 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 637
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+FI+ V G + ALTS G +YA
Sbjct: 590 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 644
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 645 WGCGACLGCGSSEATALRPK-----LIEELATTRVVDISI------------GDSHCLAL 687
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 688 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWT 741
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G ++ +G
Sbjct: 4283 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFG 4339
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +GL P+ R+ + + +P L + +Q VA G HTLV G ++
Sbjct: 4340 --QDRLIGL-PEGRA------RNHNRPQQVPGLSGIH-IQDVAVGAEHTLVLSSTGDVYT 4389
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ + + P+ V G+ + +++AG HSA T
Sbjct: 4390 WGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWT 4434
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQL ++G L+P +A + V CG T + G + A
Sbjct: 4073 DVFLWGAGRHGQLA----EAGRNILVP--TIAPSFSQAQQVVCGQNCTFVIQPNGTVLAC 4126
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4127 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4171
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4172 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4127 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4183
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4184 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 4233
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G V ++A G H+ V++
Sbjct: 4234 GNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVS 4277
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T ++S G++ A
Sbjct: 380 EVYVWGSNSSHQLVE-----GTQEKILQPKLASSFADAQTIEAGQYCTFVISSDGSVRAC 434
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R I + G HTL +
Sbjct: 435 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RAIKKVSSSKG------SDGHTLAFTT 482
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 483 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 535
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
++Y WG S+GQ G + S P++V+ LDG+ I+ ++ G H+ A T+
Sbjct: 692 EVYAWGNNSMGQCGQGN--STGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 742
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + V GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V ++G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKNGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++ AGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3070 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3126
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3127 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3176
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3177 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3225
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E++P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGHGS---SEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3121 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3235
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3236 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3295
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3296 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3327
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR V +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDR---PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4120 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4166
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4167 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4219
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEV-------------IPVLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4170 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4226
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4227 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4268
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4269 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4317
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4222 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4279 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4032 PTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVV 4089
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4090 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4141
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4142 EALQGHRVVDIACGSGDAQTL 4162
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2959 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3015
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3016 YACGEATNGRLGLGLSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3068
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3069 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3122
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA-----LTSKG 58
++YTWG GQLG + + + PR V AL G + VACG HT A TS G
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHTLAWSTSKPTSTG 4329
Query: 59 ALYA 62
L A
Sbjct: 4330 KLPA 4333
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3958 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA-T 4013
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T ++ + + V G H L +G+++
Sbjct: 4014 GYGAGGRLGIGGTESVS-----TPTLLESVQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4066
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P V+ G EV +AAGG HSA +T A L
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDL 4116
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 1 MHLDIYTWGLGS--VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D W GS GQLG+ + + PR V L VA GG H AL + G
Sbjct: 138 LHADGTVWACGSNSAGQLGNGTTAA---RSAPRPVPGLSRAVA--VAAGGSHALALCADG 192
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYM 117
++AWG GQLG G T R P+ V GV VA G+ H+L
Sbjct: 193 TVWAWGNNGYGQLGNG-------------STAHRATPVQVPGLQGVVAVAGGYMHSLALC 239
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WG+N YGQ N + ++ P PV + +V +AAGG HS L
Sbjct: 240 ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVP-GLSQVVSVAAGGFHSLAL 288
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GQLG+ S S + P V L + VA GG+H+ A+ + G ++AW
Sbjct: 343 SLWSWGNNYSGQLGNGSFSSSAR---PAPVQGLGAV--TSVAAGGMHSVAVQADGTVWAW 397
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG R+ E T R +P L G VA G H+L G +
Sbjct: 398 GRNEEGQLG---HERA-----PERATPVR-VPGL---QGEVAVAAGFYHSLSVQAGGSLW 445
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
WG N +GQ + ++ P+P W G+ R
Sbjct: 446 AWGLNDFGQLGDSEAPLMPVPAP-GWAQGKAR 476
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ G P V + VA GG H+ AL + G ++AWG
Sbjct: 244 VWAWGFNDYGQLGN-----GTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWG 298
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG E+ + R P V V VA G H+L G +
Sbjct: 299 NNGFGQLG-------------EAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLW 345
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ N + + P+PV +G V +AAGG HS +
Sbjct: 346 SWGNNYSGQLGNGSFSSSARPAPVQ-GLGAVTSVAAGGMHSVAV 388
>gi|401418791|ref|XP_003873886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490119|emb|CBZ25380.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1168
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +++TWG+G G+LGH S L R AL+G + DVACG HT ALT+ GA++
Sbjct: 738 HGELFTWGVGYQGRLGHGSKAPAYVPTLVRG--ALEGHRVVDVACGSFHTVALTAAGAVF 795
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDG 120
WG +GQ G + + P+ +R + + V GV + +ACG HT+V M
Sbjct: 796 CWGDNASGQCG------TTAGSPDAFTAPYRVVGLEYVAGGVARSIACGRQHTVVVMEGP 849
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFR 180
+ W +A + + + ++ +C GE + A G +A + +
Sbjct: 850 QP--WCPQPCCRA--DAAEFGYHSHAQVYCFGEATRAANATGSTASAVSGATRGTVSSSH 905
Query: 181 LAESVTLSNASEIE 194
+ V NAS +
Sbjct: 906 IGVPVAAMNASALP 919
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + D+ V G+ + ++A G ++CAL+ G++Y +G
Sbjct: 466 LFSWGSGGNGELGTHATR--DEPTPTMAQVTPFGVRVCEIALGANYSCALSDTGSIYTFG 523
Query: 65 GCQAGQLGLG----------PQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL-------- 105
+ GQLGLG + ++P+ L++P + L
Sbjct: 524 NGEWGQLGLGGSGCAVRGGSSPAGGGVGGGTGTGQDGADVPVELLIPRRIPLFEQLPAVH 583
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-------GEVRKLA 158
VA G++ + + ++ WG N++GQ+ ++ + VD V + +L+
Sbjct: 584 VAAGYAFAMAIVEGHHVYFWGNNNHGQSGRGRAHFDLPTKKVDAPVLVDTLEGKRIIQLS 643
Query: 159 AGGGHSAVLTDACSLKELCEFRLAESVTLSNASEIE 194
G + L+D SL + L + V L E+E
Sbjct: 644 CGSFFALALSDDGSLY---SWGLVDCVGLGTPEEVE 676
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG + GQ G H L + K P V L+G I ++CG AL+ G+L
Sbjct: 600 VYFWGNNNHGQSGRGRAHFDLPT-KKVDAPVLVDTLEGKRIIQLSCGSFFALALSDDGSL 658
Query: 61 YAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRN----IPILVVPNGVQLVACGHS---- 111
Y+WG LG + R + + ES + R P LV G Q VA G +
Sbjct: 659 YSWGLVDCVGLGTPEEVERRYRDVLGESLSNERRAVVLTPQLVTVKGRQRVAPGGAAVTA 718
Query: 112 -HTLVYMRDGKIHGWGYNSYGQ 132
+V +R G+ H N +G+
Sbjct: 719 LERIVRIRAGQWHSGAINEHGE 740
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQLG+ + P V G I V GG+H+ ALTS GA+ AWG
Sbjct: 59 FAWGDNSDGQLGNGTTTGSST---PVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGR 115
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKI 122
+GQLG G DT R+ P+ V +P G + +A G H+L G +
Sbjct: 116 NFSGQLGNG-------------DTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTV 162
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N +GQ N +T P V G + +AAG HS +T
Sbjct: 163 LAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVT 209
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 8 WGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG + GQLG+ GD P V G+ I VA GG+H+ ALT+ GA+ AWG
Sbjct: 272 WGNNADGQLGN-----GDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGR 326
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKIH 123
+GQLG G T + S P + D +P G + +A G L G +
Sbjct: 327 NVSGQLGNG--TTTGSSTPVDVD----------LPTGATINAIAAGFDFGLALTTAGAVV 374
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL----TDACSLKELC- 177
WG N GQ N + P VD G + +AAGG HS L T +L+ +
Sbjct: 375 AWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVALPTSTTTLQVMPR 434
Query: 178 ------EFRLAESVTLSNASEIEDVASRTGSEALARL 208
+ L +VT + + + RT E LA +
Sbjct: 435 KPRADQDVTLTATVTCNVDTPTGTITFRTNGETLATV 471
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ WG GQLG+ G + P V G+ I VA G H+ A+TS GA+ AW
Sbjct: 162 VLAWGENLHGQLGN----GGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAW 217
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T + S P + D +P V G +H+L G
Sbjct: 218 GDNSNGQLGNG--TTTGSSTPVDVD-----LPAGTTITAVAAGVAGAAHSLALTSTGAAL 270
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N+ GQ N +T P VD G + +AAGG HS LT A ++
Sbjct: 271 AWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAV 321
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VAC 108
+ A+ + +AWG GQLG G T S + + D Y P G + V
Sbjct: 49 SAAIRASDTYFAWGDNSDGQLGNGTTTGSSTPV----DVYL--------PAGTTITAVTA 96
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G H+L G + WG N GQ N +T P VD G + +AAG HS L
Sbjct: 97 GGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLAL 156
Query: 168 TDACSL 173
T A ++
Sbjct: 157 TSAGTV 162
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M +IY+WG +GQLG L + E P + ALD ++ +ACGG HT LT G +
Sbjct: 447 MSGNIYSWGRNDLGQLG---LGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLV 503
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM 117
+ +G + GQLG N + R P LV N V VACG HTL Y+
Sbjct: 504 FTFGAGKYGQLGH-----------NSTQNELR--PRLVTELAGNRVTQVACGRWHTLAYV 550
Query: 118 RD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----------LAAGGGHSA 165
D GK+ +G GQ N + P P+ E K + AGG S
Sbjct: 551 SDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSI 610
Query: 166 VL 167
+L
Sbjct: 611 LL 612
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG L + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 397 ELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSW 454
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG T + P L+ V+ +ACG SHT + +DG
Sbjct: 455 GRNDLGQLGLG-------------HTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDG 501
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G YGQ + + P V G V ++A G H+
Sbjct: 502 LVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHT 546
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R F+ IP P LV
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---RLFTSIPT---------PQLVEH 426
Query: 101 -NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 156
+GV LV + G +H++ G I+ WG N GQ + +PS ++ + V
Sbjct: 427 LSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEF 486
Query: 157 LAAGGGHSAVLT 168
LA GG H+A+LT
Sbjct: 487 LACGGSHTALLT 498
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY+WG
Sbjct: 3030 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3086
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3087 LGEYGRLGHG---------DNTTQLRPKLVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3136
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3137 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3185
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + P V AL G + DVACG T A+T G ++
Sbjct: 522 ELYTWGRGNYGRLGHGS---SEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVW 578
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ + D + V CG ++ +D
Sbjct: 579 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCGSQFSVALTKD 626
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP +D G +V +A G H LTD
Sbjct: 627 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD 677
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++Y+WGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3081 ELYSWGLGEYGRLGH-----GDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3135
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES---------- 87
+++WG G+LG G PQ FS +S
Sbjct: 3136 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3195
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R I+ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3196 YFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3255
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3256 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3287
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L G+ + D+A GG H+ +T+ G L+ W
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4058
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + + V VACG + TL D
Sbjct: 4059 GKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDM 4108
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 4109 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4158
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4109 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4166 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4207
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4208 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4256
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIF----IKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P + G + +ACG ++ A+T+
Sbjct: 466 EVYSWGCGDGGRLGH-----GDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTAD 520
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SH 112
G LY WG G+LG G + D P+LV V VACG +
Sbjct: 521 GELYTWGRGNYGRLGHG----------SSEDV---TTPMLVTALKGQKVVDVACGSGDAQ 567
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 568 TLAVTENGQVWSWGDGDYGK 587
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L + I V CG + ALT G +Y WG
Sbjct: 577 VWSWGDGDYGKLGRGG---SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 633
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
+LG G +D + R +L G ++V A G +H L +G++
Sbjct: 634 KGDNQRLGHG------------TDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEV 681
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 682 HSWGSNDKLQ 691
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4161 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4218 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4259
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2919 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2975
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H + DG
Sbjct: 2976 YACGEATNGRLGLGLSSGTIQ-IPRQISALSNYVVKKVA------VHSGGRHAMALTVDG 3028
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3029 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3082
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G ++ P +
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS------PCDR 4024
Query: 88 DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
++ GV++V A G +H+ G++ WG YG+ + S P
Sbjct: 4025 PRVIESL------RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK 4078
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
VD G V +A G G + L
Sbjct: 4079 LVDALQGHRVIDVACGSGDAQTL 4101
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-- 105
G H AL++ G +Y+WG G+LG G TY ++ +G Q
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHG------------DATYLEEPALITTFSGKQTGK 502
Query: 106 ----VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
+ACG +++ DG+++ WG +YG+ + S P V G+ V +A G
Sbjct: 503 QVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACG 562
Query: 161 GGHSAVL 167
G + L
Sbjct: 563 SGDAQTL 569
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCA 53
++YTWG GQLG + + + PR V AL G I VACG HT A
Sbjct: 4212 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 4258
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3897 IYGWGHNHRGQLGGIE---GAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3952
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3953 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4005
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T + L
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGEL 4055
>gi|21750989|dbj|BAC03879.1| unnamed protein product [Homo sapiens]
Length = 184
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 26 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 83
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 84 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 135
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
+G N GQ + P V+ G V ++ G
Sbjct: 136 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCG 173
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 34 VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN 93
+ L+ I I V+CG H+ AL+ +++WG GQLGLG + F S R+
Sbjct: 1 MTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKE-----FPSQASPQRVRS 55
Query: 94 IPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWC 150
+ G+ L VA G +H+ G GWG NS GQ A + ++ P+
Sbjct: 56 L------EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLS-- 107
Query: 151 VGEVRKLAA-----GGGHSAVLTD 169
VG ++ L G H+AVLT
Sbjct: 108 VGALKNLGVVYISCGDAHTAVLTQ 131
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 2749 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 2805
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G T P LV V VACG + TL D
Sbjct: 2806 LGEYGRLGHGDNTTQLK-------------PKLVTALAGRRVVQVACGSRDAQTLALTED 2852
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 2853 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 2904
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 2800 ELYTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 2854
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S P+E + I GV + CG +L R
Sbjct: 2855 VFSWGDGDFGKLGRG--GSEGSDTPHEIE-RLSGI-------GVVQIECGAQFSLALTRA 2904
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 2905 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 2956
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++ TWG G+ +LGH + D LP VVAL + DVA G H+ ALTS+G ++
Sbjct: 342 NLLTWGRGTYARLGHGN---SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 398
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ V G ++ +
Sbjct: 399 AWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQRVFAGSQFSVALSSE 444
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 445 GQLYTWG 451
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ Y+WG G +LGH GD +P ++ AL+ ++ V CG ++ A+T G L
Sbjct: 290 NAYSWGTGEDHRLGH-----GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 344
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVY 116
WG +LG G N D R++P LVV +V G +H+L
Sbjct: 345 TWGRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVALGSGDAHSLAL 391
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+G + WG YG+ N + P V+ + V+++ AG S L+ L
Sbjct: 392 TSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSVALSSEGQL 447
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 2906 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 2961
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 2962 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3005
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 2695 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 2751
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N + + + ++ VACG SH+ G++
Sbjct: 2752 WGEGEDGKLGHG----------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 2801
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
+ WG YG+ + +T P V G
Sbjct: 2802 YTWGLGEYGRLGHGDNTTQLKPKLVTALAG 2831
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 2855 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 2911
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 2912 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2959
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 2960 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3002
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 10 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVHTCALTSKGALYAWGGCQA 68
L G+L L + E LP VA D +FI C G H A+ S Y+WG +
Sbjct: 241 LSQEGKLYTWRLAKPEAEPLPMEEVAHD-VFISIAGHCEGRHFLAIDSNHNAYSWGTGED 299
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGW 125
+LG G DT+ R +P + + VQ V CG S++ G + W
Sbjct: 300 HRLGHG-------------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 346
Query: 126 GYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLT 168
G +Y + + S P+ V D V +V L +G HS LT
Sbjct: 347 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-ALGSGDAHSLALT 392
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 2643 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 2699
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 2700 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 2751
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
WG G+ + T P V+ ++R +A G HSA ++ L
Sbjct: 2752 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 2801
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 257 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 313
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 314 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 360
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 410
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 363 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 419
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 420 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 467
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ +R+++AG HSA T
Sbjct: 468 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 153 DVYLWGAGRHGQLA----EAGRNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 206
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 207 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 251
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 252 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 305
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 207 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 263
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 264 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 313
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 314 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 357
>gi|444722116|gb|ELW62819.1| RCC1 domain-containing protein 1 [Tupaia chinensis]
Length = 309
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 31/178 (17%)
Query: 10 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAG 69
LG+ GQLGH L++ EL PR + AL G+ + +VA GG H+ +++ G +Y WG ++G
Sbjct: 117 LGAHGQLGHGGLEA---ELEPRLLEALQGVPMAEVAAGGWHSVCVSATGDIYIWGWNESG 173
Query: 70 QLGLGPQT--RSFSFIPNES--------------------DTYF---RNIPILV-VPNGV 103
QL L ++ ++ + E+ T F + P LV +P G
Sbjct: 174 QLALPARSLMEDWNMVAEEATGLSEEASTLKTVAGDEAGAPTPFIAIQPFPALVDLPLGS 233
Query: 104 QLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ V +CG HT V R G+++ WG+ YGQ ++ +T + P V++ + ++ A
Sbjct: 234 EAVQASCGSRHTAVVTRTGELYTWGWGKYGQLGHQDTTSSDQPCRVEYFTNKQLQVKA 291
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 113 EVYTCGVNTKGQLGH--EKEGSK---PEQIGALADQHIIHVACGESHSLALSDQGRLFSW 167
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G GQLGL S + +P L+ ++ V+CG+ H L DG
Sbjct: 168 GAGSDGQLGLTTTEDSVA------------VPRLIKKLNQEMILQVSCGNWHCLALAADG 215
Query: 121 KIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 216 QFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 265
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS GQLG + + D +PR + L+ I V+CG H AL + G +AWG
Sbjct: 164 LFSWGAGSDGQLGLTTTE--DSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWG 221
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + F S +++ +G+ L VA G +H+ G +
Sbjct: 222 QNSHGQLGLGKE-----FPSQASPQRVKSL------DGIPLAQVAAGGAHSFALSLSGAV 270
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
GWG N+ GQ P V +V ++ G H+AVLT
Sbjct: 271 FGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLT 317
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + + P+RV +LDGI + VA GG H+ AL+ GA++ WG
Sbjct: 217 FFAWGQNSHGQLGLG--KEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 275 KNTSGQLGLSDEQD------RESPCHVK----LLRTQKVVYISCGSDHTAVLTKTGGVFT 324
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 325 FGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGL 374
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 322 VFTFGAGSCGQLGHDSF---NDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 379 GCGIKGQLGSG 389
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S G G S L PR + +K+VACGG H+ L G +Y G
Sbjct: 63 WGYWSFGYPGTSSTVQ-PIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNT 121
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 122 KGQLGHEKEGSKPEQIGALADQHIIH------------VACGESHSLALSDQGRLFSWGA 169
Query: 128 NSYGQ 132
S GQ
Sbjct: 170 GSDGQ 174
>gi|262194374|ref|YP_003265583.1| alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
gi|262077721|gb|ACY13690.1| Alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
Length = 787
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG GQLG+ + + GD E + G +A GG HTCA+ GAL W
Sbjct: 466 MYCWGDNQYGQLGYNTTEGLGDGEPVTSFGYVTLGGLATRIAAGGDHTCAILEGGALRCW 525
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G S I ++ + Y R L V +A G HT + DG +
Sbjct: 526 GKNAQGQLGRG----SVENIGDDENVYLRGNVDLGAGVEVVDIALGGYHTCALLADGAVR 581
Query: 124 GWGYNSYGQ-----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN+YGQ + T + G VRK+ AG H+ VL
Sbjct: 582 CWGYNAYGQLGYGNTEQQGDTESIADLENVSLPGPVRKIVAGLAHTCVL 630
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRR--VVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
WG + GQLG S+++ GD E + R V G+ + D+A GG HTCAL + GA+ WG
Sbjct: 525 WGKNAQGQLGRGSVENIGDDENVYLRGNVDLGAGVEVVDIALGGYHTCALLADGAVRCWG 584
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGKIH 123
GQLG G + ES N+ + P V+ + G +HT V ++ + ++
Sbjct: 585 YNAYGQLGYGNTEQQGD---TESIADLENVSL---PGPVRKIVAGLAHTCVLLKNNNRLR 638
Query: 124 GWGYNSYGQAANEKSTYAWYPS 145
WG+ G+ Y + PS
Sbjct: 639 CWGHGGEGRLG-----YGFRPS 655
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFR------NI 94
++ + G HTC LT + + WG Q GQLG G +T + + + F ++
Sbjct: 387 LRRIVAGDAHTCVLTGEDQVRCWGDNQYGQLGYGHET-----LVGDGNVEFPHPYTAGDV 441
Query: 95 PILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD-----W 149
P+ V+ + G++HT + G ++ WG N YGQ + PV
Sbjct: 442 PLF---QPVRQLVAGNNHTCALLESGLMYCWGDNQYGQLGYNTTEGLGDGEPVTSFGYVT 498
Query: 150 CVGEVRKLAAGGGHSAVLTDACSLK 174
G ++AAGG H+ + + +L+
Sbjct: 499 LGGLATRIAAGGDHTCAILEGGALR 523
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 8 WGLGSVGQLGHCSL-QSGDKELLPR-RVVALDGIFIKDVACGGVHTCAL-TSKGALYAWG 64
WG + GQLG+ + Q GD E + V+L G ++ + G HTC L + L WG
Sbjct: 583 WGYNAYGQLGYGNTEQQGDTESIADLENVSLPGP-VRKIVAGLAHTCVLLKNNNRLRCWG 641
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI--LVVPNGVQL--VACGHSHTLVYMRDG 120
G+LG G + + ++ ++ IPI L VP G + V G HT + G
Sbjct: 642 HGGEGRLGYGFRPSNNLYVGDQP----SEIPINLLDVPTGADVTDVIAGSQHTCALLSSG 697
Query: 121 KIHGWGYNSYG 131
+ WG S G
Sbjct: 698 DLKCWGEGSGG 708
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+ WG GS G LG+ + S D+ V L G +A G HTCAL S GA W
Sbjct: 698 DLKCWGEGSGGVLGYGN--SSDRSGPDEESVGLGGASAYQIAAGAYHTCALRSTGAARCW 755
Query: 64 GGCQAGQLGLG 74
G G+LG G
Sbjct: 756 GFGLYGRLGSG 766
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 16/148 (10%)
Query: 8 WGLGSVGQLGH-----CSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
WG G G+LG+ +L GD+ E+ + G + DV G HTCAL S G L
Sbjct: 640 WGHGGEGRLGYGFRPSNNLYVGDQPSEIPINLLDVPTGADVTDVIAGSQHTCALLSSGDL 699
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG G LG G + P+E +A G HT G
Sbjct: 700 KCWGEGSGGVLGYGNSSDRSG--PDEESVGLGGA-------SAYQIAAGAYHTCALRSTG 750
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
WG+ YG+ + + P+ +D
Sbjct: 751 AARCWGFGLYGRLGSGGAGNLSNPNIID 778
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3071 ELYTWGLGEYGRLGH-----GDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGA 3125
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + + GV + CG +L R
Sbjct: 3126 VFSWGDGDFGKLGRGGSEGSAT--PHEIER--------LSGIGVVQIECGAQFSLALTRA 3175
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3176 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDA 3227
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+D+ACG H+ A++S+G LY WG
Sbjct: 3020 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDIACGSSHSAAISSQGELYTWG 3076
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV + V VACG + TL D
Sbjct: 3077 LGEYGRLGHG-------------DNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTED 3123
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3124 GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRA 3175
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ + L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4177 EVYAWGEGEDGKLGHGNRLSYDR---PKLLEHLNGMSVADIACGSAHSAAITASGHVLTW 4233
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4234 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4283
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4284 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4333
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ + Y+WG G +LGH S + LP ++ +L +K V CG ++ A+T +G LY
Sbjct: 659 NFNAYSWGTGDNRRLGHGDCHSRE---LPTKIESLVR-RVKSVYCGCSYSAAITLRGNLY 714
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRD 119
WG G+LG G D + + + + V VA G +HTL +
Sbjct: 715 TWGRGNYGRLGHG----------ISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNE 764
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G ++ WG YG+ N + P ++ C+ V+++ AG S LT
Sbjct: 765 GLVYAWGDGDYGKLGNASCNSSLQPLLIE-CLPRVQRVFAGSQFSLALT 812
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3177 EVWTWGKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3232
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3233 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSMAW 3276
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4283 NVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4339
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4340 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4388 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 29 LPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
+P + +L +F+K VA GG H ALT+ G +YAWG + G+LG G
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHG------------ 4192
Query: 87 SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
+ + +L NG+ + +ACG +H+ G + WG YG+ + S P
Sbjct: 4193 NRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP 4252
Query: 145 SPVDWCVG-EVRKLAAGGGHSAVL 167
V+ +G +A G G + L
Sbjct: 4253 KLVEALLGYRAIDIACGSGDAQTL 4276
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++ G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 2966 VFACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3022
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ +ACG SH+
Sbjct: 3023 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDIACGSSHSAAISSQ 3069
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVL 167
G+++ WG YG+ + + P V C V ++A G + L
Sbjct: 3070 GELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTL 3118
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + P + L GI + + CG + ALT G ++ WG
Sbjct: 3126 VFSWGDGDFGKLGR---GGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3182
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3183 KGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3230
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3231 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3273
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 5 IYTWGLGSVGQLGHCS----LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG G G+LG+ S LQ E LPR ++ V G + ALT +G L
Sbjct: 767 VYAWGDGDYGKLGNASCNSSLQPLLIECLPR---------VQRVFAGSQFSLALTGEGQL 817
Query: 61 YAWG--GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLV 115
Y+WG C QL E + ++P L+ + VA G +H L
Sbjct: 818 YSWGKASCLGHQL-------------VERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLA 864
Query: 116 YMRDGKIHGWGYNSYGQ 132
G+I GWG N Q
Sbjct: 865 LSSAGEIFGWGRNDNQQ 881
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G ++A G
Sbjct: 2914 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACG 2970
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 2971 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3022
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAIS 3067
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG S GQLG + S L P +V L G+ +A G VH+ AL G ++AWG
Sbjct: 614 VWTWGYNSSGQLGDGTTAS---RLTPAQVPGLTGV--SAIAAGLVHSLALKQDGTVWAWG 668
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G S +P+ V GV +A G H+L +DG
Sbjct: 669 RNTDGQLGNGAAVNS-------------PVPVQVQGLTGVSAIAAGSYHSLALKQDGTAW 715
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ NE T + P V + V LA G HS L
Sbjct: 716 SWGRNGTGQLGNETITGSLTPVQVQ-GLTAVTALAGGDAHSMAL 758
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG+ + +P +V L G+ +A G H+ AL G ++WG
Sbjct: 664 VWAWGRNTDGQLGNGA---AVNSPVPVQVQGLTGV--SAIAAGSYHSLALKQDGTAWSWG 718
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG +T + S P + V +A G +H++ +RDG +
Sbjct: 719 RNGTGQLG--NETITGSLTPVQVQGL----------TAVTALAGGDAHSMALLRDGTVWT 766
Query: 125 WGYNSYGQ 132
WGYN+ G+
Sbjct: 767 WGYNAEGE 774
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P + L G+ +A G H+ AL G ++AWG
Sbjct: 514 VWGWGYNDSGQLGDTVDM---VRVTPAPLPGLTGV--TALASGTYHSLALKQDGTVWAWG 568
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G +P +P L V +A H+L +DG +
Sbjct: 569 LNNLGQLGDGTTVSRTEQMP---------VPGL---TDVTALAASTYHSLALKQDGTVWT 616
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYNS GQ + + P+ V G V +AAG HS L
Sbjct: 617 WGYNSSGQLGDGTTASRLTPAQVPGLTG-VSAIAAGLVHSLAL 658
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PRRV +A GG H+ + G AWG GQLG G T F+P
Sbjct: 440 PRRVTW--------IAAGGAHSLVVRQDGTADAWGHNGYGQLGDG--TSVDRFLPG---- 485
Query: 90 YFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
P+ V G ++ HTL +DG + GWGYN GQ + P+P+
Sbjct: 486 -----PVQVQGLTGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLP 540
Query: 149 WCVGEVRKLAAGGGHSAVL 167
G V LA+G HS L
Sbjct: 541 GLTG-VTALASGTYHSLAL 558
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 1258 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 1314
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 1315 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 1364
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 1365 FSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 1413
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + + +P V L G+ + DV+CG T A+T G ++
Sbjct: 276 ELYTWGRGNYGRLGHGS---SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 332
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D + V CG ++ +D
Sbjct: 333 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKD 380
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 381 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 431
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR V +L GI + D+A GG H+ +T G LY+W
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDR---PRVVESLRGIEVVDIAAGGAHSACITVAGDLYSW 2334
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 2335 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDT 2384
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ WG YG+ S P +D G V K+ G S LT +
Sbjct: 2385 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 2434
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 1309 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E +NI L GV + CG +L +
Sbjct: 1364 VFSWGDGDFGKLGRG---------GSEGCNVPQNIERL-NGQGVCQIECGAQFSLALTKS 1413
Query: 120 GKIHGWGYNSYGQ 132
G + WG +G+
Sbjct: 1414 GVVWTWGRGDFGE 1426
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++++WG G G+LGH GD L P+ + AL G + +ACG ++ A+T++
Sbjct: 220 EVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAE 274
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + + IP+LV G+++ V+CG +
Sbjct: 275 GELYTWGRGNYGRLGHG-------------SSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 321
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 322 TLAVTENGQVWSWGDGDYGK 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 2385 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 2441
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 2442 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 2483
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 2484 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 2532
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 2437 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 2493
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 2494 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 2535
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 1147 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 1203
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + +P + T N + V V G H + DG
Sbjct: 1204 YACGEATNGRLGLGISSGTVP-LPRQI-TALSNYVVKKVA-----VHSGGRHAMALTVDG 1256
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 1257 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1310
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + I V CG + ALT G +Y+WG
Sbjct: 331 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWG 387
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 388 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV 435
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 436 HSWGSNDQCQ 445
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +F+K VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVV 2304
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ +A G +H+ G ++ WG YG+ + S P V
Sbjct: 2305 ES-LRGIEVVD-------IAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLV 2356
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 2357 EALQGYRVIDIACGSGDAQTL 2377
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + +P+ + L+G + + CG + ALT G ++ WG
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCN---VPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 1420
Query: 65 GCQAGQLGLGPQTRSFSFIP---NESDTY-FRN-----IPI----LVVPN--GVQLVACG 109
G+L R S I N SD RN IP+ LV P G ++V
Sbjct: 1421 RGDFGEL------RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIE 1474
Query: 110 HSHTLVYM---------RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 159
+ + R +++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 1475 RNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 1534
Query: 160 GGGHSAVLT 168
G HS T
Sbjct: 1535 GSSHSVAWT 1543
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGA 59
++YTWG GQLG + + + PR V AL G I VACG HT A TSK A
Sbjct: 2488 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 2541
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 2173 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 2228
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + V V G H L +G+++
Sbjct: 2229 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFVKKVA--VNSGGKHCLALSSEGEVYS 2281
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P V+ G EV +AAGG HSA +T A L
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDL 2331
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 17 GHCSLQSGDKELL-PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGL 73
G +Q+ + + L P+ V L I VA G H AL + G +++WG G+LG
Sbjct: 175 GRVYVQAYNSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGH 234
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
G +P E + V +ACG +++ +G+++ WG +YG+
Sbjct: 235 G------DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRL 288
Query: 134 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ S P V G +V ++ G G + L
Sbjct: 289 GHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 323
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL + GQLG + + L P +V+ L G+ KD+A G VH+ ALT+ G L+ WG
Sbjct: 168 VWAWGLNAAGQLGDGTPT---RRLTPVQVLGLTGV--KDIAAGNVHSLALTADGRLWTWG 222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG G + + + GV ++ G SH+L+ DG +
Sbjct: 223 GNVDGQLGTG------DLVGRSTAAALPGM------TGVVALSGGGSHSLILKMDGSVWS 270
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ P+ V + E+ + GG HS L
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVP-GLTEMVAVTGGGQHSVAL 312
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 5 IYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG ++GQLG + +L+S L+P R AL G+ VA G H+ AL G L+AW
Sbjct: 919 VWAWGGNTLGQLGDNTTLRS----LVPVRTQALTGV--TAVAAGRNHSLALKGDGTLWAW 972
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G Q R + + S T GV + G H+L GK+
Sbjct: 973 GSNTYGELGDGTQARKLAPVQVTSLT------------GVSALDAGDHHSLAVTSGGKVW 1020
Query: 124 GWGYNSYGQAANE-KSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD 169
GWG N +GQ KS + P+ V V +A GG HS A+L+D
Sbjct: 1021 GWGRNQFGQVGKGVKSNWQLLPAQVPGLTSAV-AVAGGGEHSLALLSD 1067
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG S + + +P RV L I + G +H+ AL S G +++WG
Sbjct: 68 VWSWGGNNYGQLGTGSTR---QNPMPARVWRL--FSITAIGAGELHSLALKSDGTVWSWG 122
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
GQLG + R++P VP V +A G SH++V DG +
Sbjct: 123 ANTNGQLG-------------DGTLISRSVPA-PVPGLTNVVAIAAGFSHSMVLKADGTV 168
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N+ GQ + T P V G V+ +AAG HS LT
Sbjct: 169 WAWGLNAAGQLGDGTPTRRLTPVQVLGLTG-VKDIAAGNVHSLALT 213
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + S +LP RV L G+ +A G + AL G ++AWG
Sbjct: 869 VQAWGSNIQGQLGDGTTVS---RVLPVRVQGLTGV--AAIAAGDGFSLALKHDGTVWAWG 923
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG RS + ++ T GV VA G +H+L DG +
Sbjct: 924 GNTLGQLGDNTTLRSLVPVRTQALT------------GVTAVAAGRNHSLALKGDGTLWA 971
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N+YG+ + P V G V L AG HS +T
Sbjct: 972 WGSNTYGELGDGTQARKLAPVQVTSLTG-VSALDAGDHHSLAVT 1014
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG +L S +P V L + +A G H+ L + G ++AWG
Sbjct: 118 VWSWGANTNGQLGDGTLIS---RSVPAPVPGLTNVVA--IAAGFSHSMVLKADGTVWAWG 172
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G TR R P+ V+ GV+ +A G+ H+L DG++
Sbjct: 173 LNAAGQLGDGTPTR-------------RLTPVQVLGLTGVKDIAAGNVHSLALTADGRLW 219
Query: 124 GWGYNSYGQAAN----EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N GQ +ST A P + V L+ GG HS +L
Sbjct: 220 TWGGNVDGQLGTGDLVGRSTAAALPG-----MTGVVALSGGGSHSLIL 262
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M +++WG GQLG S+ S P +V L + V GG H+ AL G +
Sbjct: 264 MDGSVWSWGKNDAGQLGLGSVVS---TPTPTQVPGLTEMVA--VTGGGQHSVALRVDGTV 318
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+AWG QLG G QT+ S T + + A G H++ +G
Sbjct: 319 WAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGV-----------AAGGGLHSVAVKGNG 367
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
++ WG NS GQ + P+ V E ++AGGGH+ L
Sbjct: 368 EVWAWGSNSEGQVGDGTYLMKLVPTTARVLV-ERADVSAGGGHTLAL 413
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 11 GSVGQLG-HCSLQSGDKELLPR-RVVALDGIF-IKDVACGGVHTCALTSKGALYAWGGCQ 67
GSV G + S Q GD L PR V + G+ + +A G H AL + G + +WG
Sbjct: 767 GSVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRAIAGGATHGLALKTDGRVLSWGANA 826
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWG 126
G+LG + T R P +V P GV +A G H+L + DG + WG
Sbjct: 827 EGELG-------------DGTTVARRAPAVVGPLAGVLSIAVGARHSLALLGDGSVQAWG 873
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
N GQ + + P V G V +AAG G S L
Sbjct: 874 SNIQGQLGDGTTVSRVLPVRVQGLTG-VAAIAAGDGFSLAL 913
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQ+G + +L+P L + DV+ GG HT AL G + W
Sbjct: 368 EVWAWGSNSEGQVGDGTYL---MKLVPTTARVL--VERADVSAGGGHTLALKPDGTAWGW 422
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKI 122
G QLG + T R +P+ V+ V V+ G H+L DG +
Sbjct: 423 GLNAQSQLG-------------DGTTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTV 469
Query: 123 HGWGYNSYG 131
GWG N +G
Sbjct: 470 WGWGANYWG 478
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + G+LG + ++L P +V +L G+ D G H+ A+TS G ++ WG
Sbjct: 969 LWAWGSNTYGELGDGTQA---RKLAPVQVTSLTGVSALD--AGDHHSLAVTSGGKVWGWG 1023
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQ+G G ++ ++ +P + +P L VA G H+L + D +
Sbjct: 1024 RNQFGQVGKGVKS-NWQLLPAQ-------VPGL---TSAVAVAGGGEHSLALLSDRSVWA 1072
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG+ GQ S P V
Sbjct: 1073 WGHGDMGQLGTGMSNLRLSPVQV 1095
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
H+ L + G +++WGG GQLG G TR + +P F + + G
Sbjct: 58 HSLVLKADGTVWSWGGNNYGQLGTG-STRQ-NPMPARVWRLFS----------ITAIGAG 105
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H+L DG + WG N+ GQ + P+PV + V +AAG HS VL
Sbjct: 106 ELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVP-GLTNVVAIAAGFSHSMVL 162
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 17/146 (11%)
Query: 29 LPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
+P +V L D + ++ C H+ L + G L+AWG GQL G T + P
Sbjct: 591 VPEQVQGLTDAVAVRAGRC---HSVVLRADGTLWAWGRNAEGQLADG--TFTDRMTPARV 645
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
D GV + G TL DG WG N+ GQ S P+ V
Sbjct: 646 DGL----------TGVISFSVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQV 695
Query: 148 DWCVGEVRKLAAGGGHSAVLTDACSL 173
+ +VR +A G H+ VL D +L
Sbjct: 696 P-TLTDVRTVAMGAVHALVLKDDLTL 720
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
Query: 24 GDKELLPR-RVVALDGIFIK-DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
GD L R + V + G + VA G H+ AL+ G+++AWG GQLG G T +
Sbjct: 481 GDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPT-- 538
Query: 82 FIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKIHGWG 126
RN P VPN GV +A G H+L DG + WG
Sbjct: 539 ----------RNAPFR-VPNLEGVVSLAAGGEHSLALKADGTVWVWG 574
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+TWG G GQLGH + D++ +P V AL GI + ++ G HT AL+ G LYA+G
Sbjct: 2017 IFTWGWGVHGQLGH---GNTDEKAIPSLVKALLGIVVCCISAGYAHTLALSIDGVLYAFG 2073
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG G +S ++PI V +P+ + L++ G+ H L K++
Sbjct: 2074 CNILGQLGTGDNIKS-------------SVPIKVSLPDRITLISTGYFHNLAVSNTNKLY 2120
Query: 124 GWG 126
WG
Sbjct: 2121 IWG 2123
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGA 59
+IYTWG G LG S L+ G P + + I+ V+CG HT A+T+ G
Sbjct: 1910 NIYTWGSSVQGCLGTGSSVLRYGT----PHAICFFKSMKIEVFSVSCGHCHTLAVTNNG- 1964
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVY 116
+YAWG Q GQLGLG + S P LV +++ G H++
Sbjct: 1965 IYAWGASQFGQLGLGKVLQCSS-------------PELVTSLAQEIIVDAVAGQYHSVAL 2011
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLT 168
DG+I WG+ +GQ + + PS V +G V ++AG H+ L+
Sbjct: 2012 TADGRIFTWGWGVHGQLGHGNTDEKAIPSLVKALLGIVVCCISAGYAHTLALS 2064
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 21/132 (15%)
Query: 5 IYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
IY WG GQLG LQ EL V +L I D G H+ ALT+ G ++ W
Sbjct: 1965 IYAWGASQFGQLGLGKVLQCSSPEL----VTSLAQEIIVDAVAGQYHSVALTADGRIFTW 2020
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC---GHSHTLVYMRDG 120
G GQLG G +T + IP LV +V C G++HTL DG
Sbjct: 2021 GWGVHGQLGHG-------------NTDEKAIPSLVKALLGIVVCCISAGYAHTLALSIDG 2067
Query: 121 KIHGWGYNSYGQ 132
++ +G N GQ
Sbjct: 2068 VLYAFGCNILGQ 2079
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA 107
G AL G +Y WG G LG G + P+ + +F+++ I V V+
Sbjct: 1899 GFSHVALVRNGNIYTWGSSVQGCLGTGSSVLRYG-TPH-AICFFKSMKIEVFS-----VS 1951
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAV 166
CGH HTL +G I+ WG + +GQ K P V E + AG HS
Sbjct: 1952 CGHCHTLAVTNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVA 2010
Query: 167 LT 168
LT
Sbjct: 2011 LT 2012
>gi|442324509|ref|YP_007364530.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441492151|gb|AGC48846.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 586
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG S +P+ V L+G+ +A + AL + GA++ WG
Sbjct: 236 VYAWGRNTRGQLG-LGAGSAAYSNVPQLVPGLEGVV--SIAFNQSFSMALDASGAVWTWG 292
Query: 65 GCQAGQLGLG-------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
GQLG G PQT S SD+ R +P L G +A G+SH LV M
Sbjct: 293 ENSEGQLGHGTPPEPGQPQTPGASL----SDSPAR-VPGL---TGAVAIAAGYSHGLVLM 344
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + +G N GQ + +T Y PV V + K+ AG HSAVL
Sbjct: 345 EDGTVRAFGANDEGQLGDGTTTSRNYALPVP-GVTDAVKVVAGSAHSAVL 393
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 28/145 (19%)
Query: 1 MHLD----IYTWGLGSVGQLGH-CSLQSGDKELL-------PRRVVALDGIFIKDVACGG 48
M LD ++TWG S GQLGH + G + P RV L G +A G
Sbjct: 280 MALDASGAVWTWGENSEGQLGHGTPPEPGQPQTPGASLSDSPARVPGLTGAVA--IAAGY 337
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVA 107
H L G + A+G GQLG G T R+++ +P+ V + V++VA
Sbjct: 338 SHGLVLMEDGTVRAFGANDEGQLGDGTTTSRNYA------------LPVPGVTDAVKVVA 385
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQ 132
G +H+ V RDG + WG N+YG
Sbjct: 386 -GSAHSAVLKRDGTVWVWGRNTYGN 409
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 46 CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
GG+H+ AL G +YAWG GQLGLG + ++S +P + +P L GV
Sbjct: 223 AGGLHSGAL-RDGRVYAWGRNTRGQLGLGAGSAAYSNVP-------QLVPGL---EGVVS 271
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+A S ++ G + WG NS GQ
Sbjct: 272 IAFNQSFSMALDASGAVWTWGENSEGQ 298
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSK 57
+H D + TWGLG+ GQLG+ G + P V G+ + V G + A +
Sbjct: 445 VHADGTVSTWGLGASGQLGNGLKGVGVQSATP---VKAHGVTDARAVFANGNYGFARRAD 501
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G+L AWG GQLG+ + P+ + V P + + G +H +
Sbjct: 502 GSLLAWGQNGNGQLGVSDKADRVEPTPSSTQ---------VSP--LSSMGMGATHVVAVR 550
Query: 118 RDGKIHGWGYNSYG 131
DG ++ WG+N G
Sbjct: 551 GDGSVYAWGWNLEG 564
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL +S R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGL--------MTTEDSVAVPRLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G AGQLGL SD R P L+ V ++CG HT V + G
Sbjct: 215 GMNNAGQLGL-------------SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +D + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGH----------DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + I +D + + VACG SH+L G++
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLF 106
Query: 124 GWGYNSYGQ 132
WG S GQ
Sbjct: 107 SWGAGSDGQ 115
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 180 EVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 234
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y + + + + CG HT ++G
Sbjct: 235 FGWGRNKFGQLGLN----------DENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEG 284
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 285 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 335
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLG-LGPQ-----TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH----SHTL 114
GQLG LG + R F+P + + + C SH
Sbjct: 110 LDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLA 169
Query: 115 ----VYMRDGKIHGWGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 165
V + ++ WG N YGQ +K T P + +G ++AAGG HS
Sbjct: 170 ESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQT---SPQLIKSLLGIPFMQVAAGGAHSF 226
Query: 166 VLT 168
VLT
Sbjct: 227 VLT 229
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 286 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 342
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 343 GLGGNGQLGTG 353
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG L D+E++ PR+ ++DV CG HT + G +Y G
Sbjct: 4 WGNASFGQLG---LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKI 122
GQLG +S R P VV + V+CG +HTL G++
Sbjct: 61 NDLGQLG---HEKS------------RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 123 HGWGYNSYGQ 132
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G G+LGH + LP V +L G + +ACGG HT AL SKG +++W
Sbjct: 163 DLYLWGGGDRGRLGH---KDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSW 219
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G LG G +S P D R++ ++ VAC +H+ V DG ++
Sbjct: 220 GAGPQGCLGHGNLRDRYS--PLMIDGPLRDVNVV-------HVACYENHSAVISEDGNLY 270
Query: 124 GWGY-NSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG + ++ T P VD G + ++A G H+ V+ +
Sbjct: 271 TWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDE 318
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G S K+ PR V AL G I VACG HT + +G +Y++
Sbjct: 268 NLYTWG--KAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSF 325
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LG G +++ T +P LV + V+CG H+ DG +
Sbjct: 326 GINKFGELGQG---------HDKAITKPTMVPNLV---SICKVSCGRHHSAAIDEDGVLF 373
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLT 168
WG+ + GQ + + P+PV+ + + ++ G GH+A +T
Sbjct: 374 MWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAIT 419
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG G+ GQLG Q K L P V + ++DV+CG HT A+T+ G Y W
Sbjct: 372 LFMWGWGARGQLG----QGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCW 427
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--LVACGHSHTLVYMRDGK 121
G + Q G +P+ + +V+P+G++ + CG + T++ G+
Sbjct: 428 GDNASSQCG----------VPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQ 477
Query: 122 IHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGG 161
+ WG N GQ N K T++ P PV+ + K+ A G
Sbjct: 478 LFTWGCNMSGQLGNGEAKKTFS-QPMPVESLSEKRVKMVACG 518
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y WG + Q G S G+ PR +V GI + CG T +TS G L+ WG
Sbjct: 425 YCWGDNASSQCGVPSSVYGELSS-PRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGC 483
Query: 66 CQAGQLGLGPQTRSFSF-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G ++FS +P ES + R V++VACG H + HG
Sbjct: 484 NMSGQLGNGEAKKTFSQPMPVESLSEKR----------VKMVACGEDHIGCLVG----HG 529
Query: 125 W 125
W
Sbjct: 530 W 530
>gi|307167569|gb|EFN61119.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1546
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
Query: 22 QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
+SG +E P RV L I D+ACG H+ ALTS G +YAWG GQ+G
Sbjct: 152 KSGVEESRPTRVAGLSEKRIVDIACGSSHSLALTSDGKVYAWGENNFGQVG--------- 202
Query: 82 FIPNESDTYF-----RNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
NE+ F R + + V +ACG + +V + K++GWG N GQ +++
Sbjct: 203 ---NENTAIFNGSVPRQVKHELEKKNVIHIACGLTFNMVVTDENKLYGWGNNESGQISSD 259
Query: 137 KSTYA 141
++++
Sbjct: 260 NTSFS 264
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 40/180 (22%)
Query: 2 HLDIYTWGL-------------GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 48
H +Y WG GSV Q+ H EL + +V +ACG
Sbjct: 1152 HGQVYAWGKSINKHIYNADFLNGSVRQVKH--------ELEKKNIV--------HIACGE 1195
Query: 49 VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
A+T + LY WG GQ+ P + P+E T+ I LV C
Sbjct: 1196 KFNMAVTDENKLYGWGMNDKGQISTVPLQEQYVH-PHEITTFSDEIVKLV---------C 1245
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVL 167
G+ HTLV R+GKI+ WG N++GQ K+ P+ V+ +G+V +AA G S +
Sbjct: 1246 GYQHTLVLTRNGKIYAWGNNNFGQVGVNKNRKLSSPTVVNVPEMGKVLDIAAYGNLSVAV 1305
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
R+V L+ + +ACG + +T + LY WG + GQ+ + QT + F P E
Sbjct: 706 RQVNGLEKKNVVRIACGSCFSIIVTDENKLYGWGDNRGGQISIF-QTEKYIF-PRE---- 759
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
I+ + + + V CG HTLV G ++ WG N GQ K + P V+
Sbjct: 760 -----IITISDKIVKVVCGCMHTLVLTNKGNVYAWGNNCVGQVGVNKGRKPFGPIMVN 812
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+ S+ +K + PR ++ + +K V CG +HT LT+KG +YAWG
Sbjct: 735 LYGWGDNRGGQI---SIFQTEKYIFPREIITISDKIVK-VVCGCMHTLVLTNKGNVYAWG 790
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPN--GVQLVACGHSHTLVYMRDGK 121
GQ+G+ + F PI+V VP V + + ++ DG
Sbjct: 791 NNCVGQVGVNKGRKPFG-------------PIMVNVPQMGKVLNIDAFNDMSVAVGYDGT 837
Query: 122 IHGWGYNSY 130
I+ WG Y
Sbjct: 838 IYVWGVFHY 846
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P RV I D+ACG H LTS G +YAW I N D
Sbjct: 653 PIRVSGFSTKRIVDIACGNHHFLVLTSDGEVYAWED--------NIYVHDIRDIAN-FDG 703
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
R + L N V+ +ACG +++ + K++GWG N GQ + ++ +P +
Sbjct: 704 SVRQVNGLEKKNVVR-IACGSCFSIIVTDENKLYGWGDNRGGQISIFQTEKYIFPREIIT 762
Query: 150 CVGEVRKLAAGGGHSAVLTD 169
++ K+ G H+ VLT+
Sbjct: 763 ISDKIVKVVCGCMHTLVLTN 782
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 50/207 (24%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALY 61
+Y WG + GQ+G + ++ +G +PR+V L+ + +ACG +T + LY
Sbjct: 190 VYAWGENNFGQVGNENTAIFNGS---VPRQVKHELEKKNVIHIACGLTFNMVVTDENKLY 246
Query: 62 AWGGCQAGQLG------------------------------------------LGPQTRS 79
WG ++GQ+ G T S
Sbjct: 247 GWGNNESGQISSDNTSFSMTTFNGGSTDHRTSVFTHSLQNSPMFGSSSNSKNLFGCSTTS 306
Query: 80 FSFIPNESD-TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
+ + ++ Y R I ++ + + VACG+ HTL + ++ WG N GQ +
Sbjct: 307 INNVQSQKHYVYPREITYDMISSKIVKVACGYEHTLALTNNREVFAWGKNHIGQLGGNYN 366
Query: 139 TYAWYPSPVDWC-VGEVRKLAAGGGHS 164
+ P V+ + EV +AA G S
Sbjct: 367 MQSSRPIKVNTPKMREVLDIAAHGNLS 393
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G ++ +
Sbjct: 4107 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTF 4163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4164 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDG 4210
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4260
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4213 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL G +
Sbjct: 4270 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLAITSTGDV 4317
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ + G+ +R+++AG HSA T
Sbjct: 4318 YAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ + + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LVEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4003 DVYLWGAGRHGQLA----EAGRNVMIPAGAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4056
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4057 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4101
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4102 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4155
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4057 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4113
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4114 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKMFTF 4163
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLTD 169
G YG+ ++ P V G ++ ++A G H+ AV TD
Sbjct: 4164 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTD 4209
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDG+ I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|343492420|ref|ZP_08730787.1| regulator of chromosome condensation RCC1 [Vibrio nigripulchritudo
ATCC 27043]
gi|342827205|gb|EGU61599.1| regulator of chromosome condensation RCC1 [Vibrio nigripulchritudo
ATCC 27043]
Length = 395
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG GQ+G+ + DK + P +V ALD +FI D+ G H A++ +G ++AW
Sbjct: 97 DVWVWGTNREGQIGNGT---KDKVMKPTKVEALDRVFITDIGAGQRHALAVSKRGHVWAW 153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLG +T + + N T R +P L + V G S +L R GK+
Sbjct: 154 GNNAAGQLGF--ETDANTPATNNVLTPTR-VPEL---QDIVDVEGGGSFSLAVTRRGKLL 207
Query: 124 GWGYNSYGQ 132
WG N GQ
Sbjct: 208 SWGSNDNGQ 216
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 80/212 (37%), Gaps = 54/212 (25%)
Query: 5 IYTWGLGSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++ WG + GQLG + + + L P RV L I DV GG + A+T +G L
Sbjct: 150 VWAWGNNAAGQLGFETDANTPATNNVLTPTRVPELQDIV--DVEGGGSFSLAVTRRGKLL 207
Query: 62 AWGGCQAGQLGLGPQTRSFSFIP------------------------------------- 84
+WG GQLG+ P F P
Sbjct: 208 SWGSNDNGQLGVDPDVLEFRHTPEAVSGINKRVKAAAAGKDHAAALFYDGSVMAWGQNFS 267
Query: 85 ------NESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
++ DT+ P V NGV++ ++ + TL + ++ WG + G
Sbjct: 268 GQLGIGSDEDTH---TPTPVKTNGVKMRSISASGNFTLAVSKQRNLYSWGQDLLGSLGTG 324
Query: 137 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
S P+ V++ V+K G GH+ V+T
Sbjct: 325 PSDTN-VPTKVEFFTQPVKKAVNGLGHTIVIT 355
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG S D++ V +G+ ++ ++ G T A++ + LY+WG
Sbjct: 259 VMAWGQNFSGQLGIGS----DEDTHTPTPVKTNGVKMRSISASGNFTLAVSKQRNLYSWG 314
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG GP S + +P + + F P+ NG+ GH+ + DG
Sbjct: 315 QDLLGSLGTGP---SDTNVPTKVE--FFTQPVKKAVNGL-----GHTIVITQEEDGSEAF 364
Query: 125 W--GYNSYGQAANEKSTYAWY 143
W G NS+ Q E + +A Y
Sbjct: 365 WTFGLNSFDQIGVEDAPFANY 385
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 33 VVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFR 92
V+ L G + D+A GG HT A G LY WG + Q G G +R+ +P D
Sbjct: 17 VLGLSGCYESDIAAGGAHTIAY-KDGTLYTWGRNTSNQAGNGETSRTVD-LPTAID---- 70
Query: 93 NIPILVVPN--GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
L +P GV + + TL+ G + WG N GQ N P+ V+
Sbjct: 71 ----LALPRRIGVIDIKANLNFTLLLDSAGDVWVWGTNREGQIGNGTKDKVMKPTKVE 124
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 144 NIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 200
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 201 GAGKHGQLG-----------HNSTQNELR--PCLVAELVEYRVTQIACGRWHTLAYVSDL 247
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 248 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 306
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 91 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 148
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 149 GKNEFGQLGLG-------------HTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDG 195
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V V V ++A G H+
Sbjct: 196 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHT 240
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 26/126 (20%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN------GVQL- 105
A T G L+AWG GQLG+G R P P GV L
Sbjct: 85 ARTPSGELFAWGQNLHGQLGVG-----------------RKFPSTTTPQIVEHLAGVPLA 127
Query: 106 -VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 163
++ G +H++ G I+ WG N +GQ + YPS ++ + V +A GG H
Sbjct: 128 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSH 187
Query: 164 SAVLTD 169
SA+LT
Sbjct: 188 SALLTQ 193
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 4101 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4157
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HT+ DG
Sbjct: 4158 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG 4204
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 4254
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4207 VWAFGDGDYGKLG---LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L +GV + +A G HTL G +
Sbjct: 4264 --QDRLIGL-PEGRA------RNHNRPQQVPVL---SGVFIEDIAVGAEHTLALSSTGDV 4311
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ + G+ +R+++AG HSA T
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWT 734
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P V A + V CG T + + G + A
Sbjct: 3997 DVYLWGAGRHGQLA----EAGRNVMVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 4050
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4051 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4095
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4096 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4051 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4108 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 4157
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLTD 169
G YG+ ++ P V G ++ ++A G H+ AV TD
Sbjct: 4158 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTD 4203
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDG+ I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ + D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPS 783
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGALYA 62
+YT G+ S G LG L + P+ V L + +K V+CG HT ALT G +YA
Sbjct: 378 LYTMGVSSSGCLGLGPLLTQSSP--PKLVQTLFDLKVKVLSVSCGRKHTLALTDYG-VYA 434
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLGP + Y + I L VQ V+ G HT+ G++
Sbjct: 435 WGSNTYGQLGLGPLI--------QESPYPQIITNLAFKKMVQ-VSAGQYHTIALSSSGEV 485
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+ WG+ +GQ + +YP + + +V ++AAG HS +LT
Sbjct: 486 YTWGWGIHGQLGHGDCDNIYYPKLLPFQ-HKVVQVAAGHAHSLILT 530
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG L + P+ + L + V+ G HT AL+S G +Y WG
Sbjct: 432 VYAWGSNTYGQLGLGPLI--QESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWG 489
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + + Y+ + L + V VA GH+H+L+ R+GK+ G
Sbjct: 490 WGIHGQLGHG----------DCDNIYYPKL--LPFQHKVVQVAAGHAHSLILTREGKLFG 537
Query: 125 WGYNSYGQ 132
+G N +GQ
Sbjct: 538 FGSNVFGQ 545
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 33/134 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD------KELLP--RRVVALDGIFIKDVACGGVHTCALT 55
++YTWG G GQLGH GD +LLP +VV VA G H+ LT
Sbjct: 484 EVYTWGWGIHGQLGH-----GDCDNIYYPKLLPFQHKVV--------QVAAGHAHSLILT 530
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN---GVQLVACGHSH 112
+G L+ +G GQL + +S+ R + IL++P+ ++ +A G+ H
Sbjct: 531 REGKLFGFGSNVFGQL---------EYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFH 581
Query: 113 TLVYMRDGKIHGWG 126
+ D +++ WG
Sbjct: 582 NIAVRADQEVYTWG 595
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG H A+ LY G +G LGLGP S P T F ++ + V+
Sbjct: 363 LSCGFEH-AAVVRNSCLYTMGVSSSGCLGLGPLLTQ-SSPPKLVQTLF-DLKVKVLS--- 416
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPV-DWCVGEVRKLAAGG 161
V+CG HTL + D ++ WG N+YGQ + YP + + ++ +++AG
Sbjct: 417 --VSCGRKHTLA-LTDYGVYAWGSNTYGQLGLGPLIQESPYPQIITNLAFKKMVQVSAGQ 473
Query: 162 GHSAVLTDA 170
H+ L+ +
Sbjct: 474 YHTIALSSS 482
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H VLT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 727
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+A G H+ LTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H LV D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4087
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4088 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4140 EALQGHRVIDIACGSGDAQTL 4160
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P + +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGEL 3121
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4319 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
Length = 476
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L + WGL G C S D EL P V L GI I VA G HT +++ G +YA
Sbjct: 320 LLTFGWGL-----YGQCGQGSTDDELSPICVSPLLGIRIAGVAAGLWHTICVSADGDVYA 374
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+GG Q GQLG G E+ + P L + ++V+CG H+ + DGK+
Sbjct: 375 FGGNQFGQLGTGSDQ-------AETTPRLLDAPSLEDIH-AKVVSCGARHSAIVAEDGKV 426
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLTDA 170
WG+N YGQ PSPV + C+ R +A G H+ +L ++
Sbjct: 427 FCWGWNKYGQLGLGDVIDRNIPSPVTIEGCI--PRNVACGWWHTLLLAES 474
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 20 SLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQT 77
S SGD+ L LP V G+ I VA GG HT AL+ G ++ WG GQLGLG +
Sbjct: 199 SSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 258
Query: 78 RSFSF---IPNESDTYFRNIPI-------------LVVPNG-VQLVACGHSHTLVYMRDG 120
R S +P +Y ++ P VP V+ +ACG H+ V G
Sbjct: 259 RMVSSPHPVPCVDPSYGKDRPAPFSRGGMTSEGHGFRVPGSYVKGIACGGRHSAVITDAG 318
Query: 121 KIHGWGYNSYGQ 132
+ +G+ YGQ
Sbjct: 319 ALLTFGWGLYGQ 330
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ I +ACG HT ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G ++ S P+ ++ V++ AC +HT +
Sbjct: 258 GANTYGQLGTGNKSNQLS-------------PVQIMMEKERVVEIAACHSAHTSAAKTQS 304
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 305 GQVYMWG 311
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PRRV L G + +ACG + A+ S G +Y
Sbjct: 148 DLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLGLG + P V +GV + +ACG++HTL +
Sbjct: 205 WGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACGYAHTLALTDE 251
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
G ++ WG N+YGQ + SPV + + R + HSA
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKERVVEIAACHSA 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK---DVACGGVHTCALTSKGAL 60
++Y WG QLG+ + G + P +V + IK +VACG H+ AL+ G L
Sbjct: 95 EVYAWGHNGYSQLGNGTTNQG---ITPVQVCT--NLLIKKVVEVACGSHHSMALSFDGDL 149
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG GQ+G G P R + + V +ACG + ++ + +G
Sbjct: 150 YAWGYNNCGQVGSGSTANQ----PTP-----RRVSNCLQGKMVVGIACGQTSSMAVVSNG 200
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+++GWGYN GQ + P V G + ++A G H+ LTD
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 250
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + ++P+++ AL G I ++ G G H T G +
Sbjct: 42 EVFVFGLNCSNCLG-----TGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEV 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG QLG G N+ T + L++ V+ VACG H++ DG
Sbjct: 97 YAWGHNGYSQLGNG--------TTNQGITPVQVCTNLLIKKVVE-VACGSHHSMALSFDG 147
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
++ WGYN+ GQ + + P V C+
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 178
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 93/253 (36%), Gaps = 57/253 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 254 LYAWGANTYGQLG-----TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS-------------------------FI------------P 84
WG C+ GQ + P F+ F+ P
Sbjct: 309 MWGQCR-GQSVILPHLTHFACTDDVFACFATPAVMWRLLSVEHEDFLTVAESLKKEFDSP 367
Query: 85 NESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
SD FR + + V V + C H T+ W + ++ +Y Y
Sbjct: 368 ETSDLKFRVDGKYIYVHKAVLKIRCEHFRTMFQSY------WNEDMKEVIEIDQFSYPVY 421
Query: 144 PSPVDWCVGEVRKLAA--GGGHSAVLTDACS--LKELCEFRLAESVTLSNASEIEDVASR 199
+ +++ + L G + T C LK+LC+ + +T+ NA + A R
Sbjct: 422 RAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLLSAAVR 481
Query: 200 TGSEALARLCERL 212
+E L C +
Sbjct: 482 YDAEDLEEFCFKF 494
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G+LGH + + + P+ + AL G I D+ACGG H+ A+TS G LY W
Sbjct: 3138 DVYSWGEGDDGKLGHGNRLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 3194
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + +V V VACG + TL D
Sbjct: 3195 GKGRYGRLGHG----------DSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 3244
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P ++ G V K+ G S LT + S+
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 3297
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK P+ + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 2163 VFSWGEGEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG 2219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + I LV VQ VACG + TL +G +
Sbjct: 2220 LGEYGRLGHG---------DNITQLKPKLIKSLVGHRIVQ-VACGSRDAQTLALTDEGWV 2269
Query: 123 HGWGYNSYGQ 132
WG +G+
Sbjct: 2270 FSWGDGDFGK 2279
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ + +L G I VACG T ALT +G
Sbjct: 2214 ELYTWGLGEYGRLGH-----GDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGW 2268
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E NI L VQ + CG +L +
Sbjct: 2269 VFSWGDGDFGKLGRG---------GSEGCNIPHNIERLNALEVVQ-IECGAQFSLALTKT 2318
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P+ ++ +V +A G H +TD
Sbjct: 2319 GEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT 2370
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + +P + L+ + + + CG + ALT G ++ WG
Sbjct: 2269 VFSWGDGDFGKLGRGGSEGCN---IPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWG 2325
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
+LG G SD + R ++ + V VA G H L G++
Sbjct: 2326 KGDYFRLGHG------------SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 2373
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N +GQ N + P+ V + ++A G HS T
Sbjct: 2374 YAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + G+ P++V AL G I +A G +H A + +G ++ WG
Sbjct: 3297 VYTWGKGDYHRLGHGT---GEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 3353
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 116
GQLG +++ + ++ G ++ VACG +HTL +
Sbjct: 3354 DNDEGQLG------------DDTTNAIQRPRLVSALQGKKITNVACGSAHTLAW 3395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + PR + L IK VA GG H ALT G +++
Sbjct: 2109 LYACGEGTNGRLG---LGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N + + + ++ +ACG SH+ G++
Sbjct: 2166 WGEGEDGKLGHG----------NRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGEL 2215
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + + P + VG + ++A G + LTD
Sbjct: 2216 YTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTD 2265
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P+++ +L G+ + V CG + ALT G++Y W
Sbjct: 3244 NVWSWGDGDYGKLGRGG---SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTW 3300
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G + + R + G ++ +A G H + +G+
Sbjct: 3301 GKGDYHRLGHG------------TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGE 3348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ ++ + P V G ++ +A G H+
Sbjct: 3349 VFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHT 3392
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K LP + L ++ +A G ++ +G LYA G
Sbjct: 2057 VFVWGLNDKDQLGG---MKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG +P Y R IP L V V V G H + DGK+
Sbjct: 2114 EGTNGRLGLGHSNN----VP-----YPRPIPFLSQYVIKKVA-VHSGGKHAMALTLDGKV 2163
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + P ++ ++R +A G HSA +T + L
Sbjct: 2164 FSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGEL 2215
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D L+P + ++ +FIK +A GG H AL++ +Y+WG G+LG G + +
Sbjct: 3102 DSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETP 3161
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
E+ + I I ACG +H+ G+++ WG YG+ + S
Sbjct: 3162 KLIEALQGYEIIDI----------ACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL 3211
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVL 167
P ++ VG +V +A G G + L
Sbjct: 3212 KPKLIEELVGYKVIDVACGSGDAQTL 3237
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH S Q K P + +L + VA G +H A+T G +YAW
Sbjct: 2320 EVWTWGKGDYFRLGHGSDQHVRK---PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAW 2376
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-MRDG 120
G GQ G G R + + D + + VACG SH++ + ++D
Sbjct: 2377 GDNDHGQQGNGTTIVNRKPALVHGLEDVH------------INRVACGSSHSIAWTLQDT 2424
Query: 121 KI 122
++
Sbjct: 2425 QV 2426
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++TWG GQLG + + + PR V AL G I +VACG HT A ++ A
Sbjct: 3348 EVFTWGDNDEGQLGDDTTNAIQR---PRLVSALQGKKITNVACGSAHTLAWSTNNA 3400
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G+LGH + + + P+ + AL G I D+ACGG H+ A+TS G LY W
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 4033
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + +V V VACG + TL D
Sbjct: 4034 GKGRYGRLGHG----------DSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 4083
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P ++ G V K+ G S LT + S+
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 4136
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + ++ P + AL G I DV CGG ++ A+++ GALY W
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE---PTLIQALKGKDIIDVECGGTYSAAISANGALYTW 591
Query: 64 GGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 119
G G+LG G + I SD + VACG ++HTL
Sbjct: 592 GRGNYGRLGHGTAEDCLTPTMISALSDEHIIK------------VACGSFYAHTLCITSQ 639
Query: 120 GKIHGWGYNSYGQ 132
GK++ WG YG+
Sbjct: 640 GKVYSWGDGDYGK 652
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK P+ + AL I+D+ACG H+ A+TS G LY WG
Sbjct: 3002 VFSWGEGEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG 3058
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + I LV VQ VACG + TL +G +
Sbjct: 3059 LGEYGRLGHG---------DNITQLKPKLIKSLVGHRIVQ-VACGSRDAQTLALTDEGWV 3108
Query: 123 HGWGYNSYGQ 132
WG +G+
Sbjct: 3109 FSWGDGDFGK 3118
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D LPR + L + I V CG + AL+ G +Y WG
Sbjct: 642 VYSWGDGDYGKLGRGG---SDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWG 698
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ +LG P E + F + ++ V V+ G SH L G+++G
Sbjct: 699 KGEGWKLGH----------PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N Q + + P ++ G+ V + G S TD
Sbjct: 749 WGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ + +L G I VACG T ALT +G
Sbjct: 3053 ELYTWGLGEYGRLGH-----GDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGW 3107
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E NI L VQ + CG +L +
Sbjct: 3108 VFSWGDGDFGKLGRG---------GSEGCNIPHNIERLNALEVVQ-IECGAQFSLALTKT 3157
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P+ ++ +V +A G H +TD
Sbjct: 3158 GEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT 3209
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + +P + L+ + + + CG + ALT G ++ WG
Sbjct: 3108 VFSWGDGDFGKLGRGGSEGCN---IPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWG 3164
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
+LG G SD + R ++ + V VA G H L G++
Sbjct: 3165 KGDYFRLGHG------------SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ WG N +GQ N + P+ V + ++A G HS T
Sbjct: 3213 YAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + G+ P++V AL G I +A G +H A + +G ++ WG
Sbjct: 4136 VYTWGKGDYHRLGHGT---GEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 116
GQLG +++ + ++ G ++ VACG +HTL +
Sbjct: 4193 DNDEGQLG------------DDTTNAIQRPRLVSALQGKKITNVACGSAHTLAW 4234
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + PR + L IK VA GG H ALT G +++
Sbjct: 2948 LYACGEGTNGRLG---LGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G N + + + ++ +ACG SH+ G++
Sbjct: 3005 WGEGEDGKLGHG----------NRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGEL 3054
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
+ WG YG+ + + P + VG + ++A G + LTD
Sbjct: 3055 YTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTD 3104
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P+++ +L G+ + V CG + ALT G++Y W
Sbjct: 4083 NVWSWGDGDYGKLGRGG---SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTW 4139
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G + + R + G ++ +A G H + +G+
Sbjct: 4140 GKGDYHRLGHG------------TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGE 4187
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ ++ + P V G ++ +A G H+
Sbjct: 4188 VFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHT 4231
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K LP + L ++ +A G ++ +G LYA G
Sbjct: 2896 VFVWGLNDKDQLGG---MKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2952
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG +P Y R IP L V V V G H + DGK+
Sbjct: 2953 EGTNGRLGLGHSNN----VP-----YPRPIPFLSQYVIKKVA-VHSGGKHAMALTLDGKV 3002
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + P ++ ++R +A G HSA +T + L
Sbjct: 3003 FSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGEL 3054
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D L+P + ++ +FIK +A GG H AL++ +Y+WG G+LG G + +
Sbjct: 3941 DSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETP 4000
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
E+ + I I ACG +H+ G+++ WG YG+ + S
Sbjct: 4001 KLIEALQGYEIIDI----------ACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL 4050
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVL 167
P ++ VG +V +A G G + L
Sbjct: 4051 KPKLIEELVGYKVIDVACGSGDAQTL 4076
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH S Q K P + +L + VA G +H A+T G +YAW
Sbjct: 3159 EVWTWGKGDYFRLGHGSDQHVRK---PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAW 3215
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-MRDG 120
G GQ G G R + + D + + VACG SH++ + ++D
Sbjct: 3216 GDNDHGQQGNGTTIVNRKPALVHGLEDVH------------INRVACGSSHSIAWTLQDT 3263
Query: 121 KI 122
++
Sbjct: 3264 QV 3265
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++TWG GQLG + + + PR V AL G I +VACG HT A ++ A
Sbjct: 4187 EVFTWGDNDEGQLGDDTTNAIQR---PRLVSALQGKKITNVACGSAHTLAWSTNNA 4239
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ + L GI + +A G H ALT +Y+WG G+LG G
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHG------------- 550
Query: 88 DTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
DT + P L+ + V CG +++ +G ++ WG +YG+ + + P
Sbjct: 551 DTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP 610
Query: 145 SPVDWCVGE-VRKLAAGGGHSAVL 167
+ + E + K+A G ++ L
Sbjct: 611 TMISALSDEHIIKVACGSFYAHTL 634
>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
Length = 516
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI---FIKDVACGGVHTCALTSKGAL 60
++ +G GQ+G Q+ +K PR V + GI I+ + CG HT LT KG +
Sbjct: 247 SVFCFGFNRYGQVGQG--QACNKISTPR-PVNMSGIGSSQIRQLVCGRHHTSVLTDKGQV 303
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
++WG G+LGL P + +P E FR P+ +ACG H L DG
Sbjct: 304 FSWGASSFGRLGL-PDPKKIVGLPTEVPA-FRCCPLAA-------LACGDFHVLGLGVDG 354
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ + WGY S GQ + + P PV+ G + ++A G S V+T+A L
Sbjct: 355 RAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRL 408
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 78/201 (38%), Gaps = 40/201 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG S G+LG L K + LP V A + +ACG H L G YA
Sbjct: 302 QVFSWGASSFGRLG---LPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYA 358
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ GLG + P E R + +ACG ++V G++
Sbjct: 359 WGYGSEGQGGLGATLHLRTPRPVEGLEGSR----------IAQIACGAWWSMVVTEAGRL 408
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP----------------VDWCVG---------EVRKL 157
+ WGY G E+++ Y P + C+ V K+
Sbjct: 409 YTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKV 468
Query: 158 AAGGGHSAVLTDACSLKELCE 178
AGGGH+ ++ + LC+
Sbjct: 469 VAGGGHTIIMARRIQ-RRLCK 488
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 26 KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
+ L R VA + ++D+ACG T ALTS+G Y WG T + P
Sbjct: 113 QPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWG------------TVNGRAYPE 160
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ------AANEKST 139
S L VP V+CG H L M G + WG +GQ ++++
Sbjct: 161 PSRVS------LGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPR 214
Query: 140 YAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+ P V +A GG HSAV T S+
Sbjct: 215 LIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSV 248
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-----GIFIKDVACGGVHTCALTSKGA 59
+ +WG+G GQLG S D+ PR + LD G + VACGG H+ T+ +
Sbjct: 191 VTSWGVGYFGQLGQGDNLSSDR---PRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQS 247
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ +G + GQ+G G S P + + + ++ + CG HT V
Sbjct: 248 VFCFGFNRYGQVGQGQACNKIS-TPRPVNMSG------IGSSQIRQLVCGRHHTSVLTDK 300
Query: 120 GKIHGWGYNSYGQ 132
G++ WG +S+G+
Sbjct: 301 GQVFSWGASSFGR 313
>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 309
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y +G+ + QLG S + E P + +L G+ IK +A G H+ ALT KG +
Sbjct: 77 LKVYGFGMNTEHQLGLDSQEFQHTE--PALIRSLTGLQIKQLAAGAEHSIALTDKGVAFV 134
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLGLG TR P E R + V+ G+ HT + +GK+
Sbjct: 135 WGCGKEGQLGLG--TRPSVPEPLELKVDIR----------IMSVSAGYYHTAIVSAEGKV 182
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G GQ K+T + P P+ + G ++ ++ G H+A L+
Sbjct: 183 YAFGDGRNGQLGLGNKTTQSSKPQPIPFPEGIKIARVVCGESHTAFLS 230
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLG---PQTRSFSFIPNESDTYFRN 93
DG+ + ++ ++G +++G GQLGLG P TR I D
Sbjct: 4 DGVQMASISGKVQQKTRQITEGRAFSFGSNGYGQLGLGHKNPVTRP-KCIKGLKD----- 57
Query: 94 IPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVG 152
+ V LVACG +HTLV D K++G+G N+ Q + + P+ + G
Sbjct: 58 -------HRVVLVACGRAHTLVATDDLKVYGFGMNTEHQLGLDSQEFQHTEPALIRSLTG 110
Query: 153 -EVRKLAAGGGHSAVLTD 169
++++LAAG HS LTD
Sbjct: 111 LQIKQLAAGAEHSIALTD 128
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 891 ELYTWGLGEYGRLGH-----GDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 945
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 946 VFSWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRA 995
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 996 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 1047
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 840 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 896
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + L VQ VACG + TL DG +
Sbjct: 897 LGEYGRLGHG---------DNATQLKPKLVTALAGRRVVQ-VACGSRDAQTLALTEDGAV 946
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 947 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 995
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 1904 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 1960
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 1961 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 2010
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 2011 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 2060
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 2010 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTW 2066
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 2067 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 2114
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 2115 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH Q K P+ + L G + VA G +H A+T G +YAW
Sbjct: 997 EVWTWGKGDYYRLGHGGDQHVRK---PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 1053
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
G GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 1054 GDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 1096
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 1868 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM----- 1922
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 1923 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 1974
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 1975 DQLRPKLVEALLGYRAIDIACGSGDAQTL 2003
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 786 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 842
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ VACG SH+
Sbjct: 843 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDVACGSSHSAAISSQ 889
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
G+++ WG YG+ + + P V G
Sbjct: 890 GELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR 923
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 946 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 1002
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 1003 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 1050
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 1051 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 1093
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 734 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 790
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 791 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 842
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
WG G+ + T P V+ ++R +A G HSA ++ L
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 892
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL +S R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGL--------MTTEDSVAVPRLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDG 120
G AGQLGL SD R P L+ V ++CG HT V + G
Sbjct: 215 GMNNAGQLGL-------------SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ +G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG L P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLG---LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG + +D + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGH----------DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + I +D + + VACG SH+L G++
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLF 106
Query: 124 GWGYNSYGQ 132
WG S GQ
Sbjct: 107 SWGAGSDGQ 115
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + V GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGRNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGANTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDQGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++ AGG HS L+
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISPNLQGVVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDQGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 482 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 538
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 539 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 586
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H VLT+
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 637
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+A G H+ LTS G LY WG
Sbjct: 2979 VFSWGEGDDGKLGHFSRMNCDK---PRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3035
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3036 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3085
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3086 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3134
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3030 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3084
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3085 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3144
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3145 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3204
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3205 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3236
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4027
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4028 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4074
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4075 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4127
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4078 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4134
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4135 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4176
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4177 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4225
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 426 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 480
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 481 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 527
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 528 TLAVTENGQVWSWGDGDYGK 547
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4130 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4187 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 537 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 593
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H LV D ++
Sbjct: 594 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 641
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 642 HSWGSNDQCQ 651
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3997
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3998 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4049
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4050 EALQGHRVIDIACGSGDAQTL 4070
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2868 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2924
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 2925 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 2977
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P + +R +A G HSA LT + L
Sbjct: 2978 KVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGEL 3031
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4181 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4228
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4229 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4256
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 393 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 446
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 506
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 507 LVAGLKGLKVIDVACGSGDAQTL 529
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3866 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3921
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3922 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3974
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3975 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4024
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+IY+WG QLG+ + G LLP R+ L I +ACG H+ LT +G ++A
Sbjct: 99 EIYSWGHNGYCQLGNGTTNQG---LLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFA 155
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ+G G T + S P R + ++ V +ACG + +L + G++
Sbjct: 156 WGYNNCGQVGSGA-TANIS-TP-------RKVVSVLGGKRVVSIACGQTSSLAVVDSGEV 206
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTD 169
+GWGYN GQ + P V G + AA G HS L+D
Sbjct: 207 YGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSD 254
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G + + PR+VV+ L G + +ACG + A+ G +Y
Sbjct: 152 EVFAWGYNNCGQVGSGATANIST---PRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYG 208
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + S ++ L++ ACG++H++ +G I
Sbjct: 209 WGYNGNGQLGLGNN------VNQPSPCKVSSLNGLIISQA----ACGYAHSMALSDEGNI 258
Query: 123 HGWGYNSYGQ 132
+ WG NSYGQ
Sbjct: 259 YTWGANSYGQ 268
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P +V +L+G+ I ACG H+ AL+ +G +Y W
Sbjct: 205 EVYGWGYNGNGQLG---LGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTW 261
Query: 64 GGCQAGQLGLGPQ 76
G GQLG G +
Sbjct: 262 GANSYGQLGTGNK 274
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 28 LLPRRVVAL--DGIFIKDVACG-GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
L PR++ L G+F +A G G H A T G +Y+WG G LG T + +P
Sbjct: 67 LTPRKIEGLCKKGMFA--LAFGSGPHVVAATENGEIYSWG--HNGYCQLGNGTTNQGLLP 122
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
+ + I +ACG H+LV G++ WGYN+ GQ + + P
Sbjct: 123 HRITGNLGSCKI-------SQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTP 175
Query: 145 SPVDWCVGEVRKLAAGGGHSAVL 167
V +G R ++ G ++ L
Sbjct: 176 RKVVSVLGGKRVVSIACGQTSSL 198
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+T ++A+G LGLG S + P R I L L H
Sbjct: 41 VTKDDEVFAFGNNHNACLGLGDVMSSLT--P-------RKIEGLCKKGMFALAFGSGPHV 91
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLTD 169
+ +G+I+ WG+N Y Q N + P + +G ++ ++A G HS VLTD
Sbjct: 92 VAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD 149
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVH-TCALTSKGAL 60
+IYTWG S GQLG +G+K L ++ G FI A H + A+T G +
Sbjct: 257 NIYTWGANSYGQLG-----TGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKV 311
Query: 61 YAWGGCQAGQLGLGPQTRSFS 81
Y WG C+ GQ P F+
Sbjct: 312 YMWGQCR-GQSITSPMETRFT 331
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG L D++ P V L +F VA G H+ AL +G ++ WG
Sbjct: 941 VYAWGSSTYGQLG---LGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWG 997
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G + N P LV V N VQ V+ G++HT V R G++
Sbjct: 998 WGVHGQLGQG-------------NAENLNKPHLVAAVQNAVQ-VSTGYAHTAVLTRSGEV 1043
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G +GQ + + P V +G+V ++A G H+ V+T +
Sbjct: 1044 FTFGCGLHGQLGHGATDKVSIPQRVQGIMGKVAQVACGLFHTVVVTSS 1091
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+CG H LT +G +Y WG G+LG G ++P R + + V
Sbjct: 870 VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPP-----MRVETLSIQRVQV 923
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD-----WCVGEVRKLA 158
VACG HTL +G ++ WG ++YGQ +P+ V +CV +A
Sbjct: 924 MAVACGQEHTLALCDNG-VYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVA----VA 978
Query: 159 AGGGHSAVL 167
G HSA L
Sbjct: 979 TGQYHSAAL 987
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++T+G G GQLGH + DK +P+RV + G + VACG HT +TS +Y +
Sbjct: 1042 EVFTFGCGLHGQLGHGA---TDKVSIPQRVQGIMGK-VAQVACGLFHTVVVTSSQQVYTF 1097
Query: 64 GG-CQAGQLGLGPQTR------SFSFIPNE-----SDTYFRNIPI--------------- 96
G Q + L R S++ P + S F+ + +
Sbjct: 1098 GRHPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAGA 1157
Query: 97 ---LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+++ + V +A G ++ R GK+ WG NS+GQ
Sbjct: 1158 VHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQ 1196
>gi|198435272|ref|XP_002131982.1| PREDICTED: similar to Wu:fc44f06 protein [Ciona intestinalis]
Length = 373
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG+GS GQLGH GD E L P+ + AL G+ IK V GG H+ AL LY
Sbjct: 174 NVFSWGIGSHGQLGH-----GDMETLKQPQLIDALGGVCIKRVGAGGWHSAALADTDDLY 228
Query: 62 AWGGCQAGQLG----LGPQTRSFSFIPNESDTYFRN-IPILVVPNGVQL----------- 105
WG Q+GQ G +G T S + E+ T N I +++ P ++L
Sbjct: 229 VWGWNQSGQTGFQAPVGICTNSTEALKMENSTKDSNAIGVVLNPTLLELEMCADSNSFVS 288
Query: 106 ---VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V+CG HT G + WG+ YGQ
Sbjct: 289 IIDVSCGVRHTAAVTSCGTLITWGWARYGQ 318
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 73 LGPQTRSFSFIPNESDTYFRNI---PILVVP----NGVQLVACGHSHTLVYMRDGKIHGW 125
+ + F + ++ + NI PI++ P + V+ V+CG+ H+L+ +G + W
Sbjct: 119 VAKDSNGFYLVADDVLLHCNNILESPIIMRPMFSSHKVRNVSCGNCHSLLSTHNGNVFSW 178
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G S+GQ + P +D G ++++ AGG HSA L D
Sbjct: 179 GIGSHGQLGHGDMETLKQPQLIDALGGVCIKRVGAGGWHSAALADT 224
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ V L GI I D+ACGG H+ A+TS G LY WG
Sbjct: 4040 VYSWGEGDDGKLGHGNRLSYDR---PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG 4096
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH--SHTLVYMRDGK 121
+ G+LG G +SD R + + + V VACG + TL D
Sbjct: 4097 KGRYGRLGHG-----------DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 4145
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P +D G V K+ G S LT
Sbjct: 4146 VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALT 4193
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR + +L I+D+ACG H+ A+ S G LY WG
Sbjct: 3059 VFSWGEGEDGKLGHGNCTTLDK---PRLIESLKSKRIRDIACGSGHSAAIASNGELYTWG 3115
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V VACG + T+ D
Sbjct: 3116 LGEYGRLGHG-------------DTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTAD 3162
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P VD G V ++ G S LT
Sbjct: 3163 GCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALT 3212
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD ++ P+ V AL G + VACG T +LT+ G
Sbjct: 3110 ELYTWGLGEYGRLGH-----GDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGC 3164
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
+Y WG G+LG G ++ P+LV GV V CG +L
Sbjct: 3165 VYTWGDGDFGKLGRGGSDGCYT-------------PLLVDRLNGLGVVQVECGAQFSLAL 3211
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ G++ WG Y + + + P+ V+ G ++ +A G H +TD
Sbjct: 3212 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3265
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S D+ L ++ + IFI ACG ++ AL++ G LY WG
Sbjct: 530 VYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFI---ACGSTYSAALSASGELYTWG 586
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
G+LG G N+ T +P LV + V VACG S TL
Sbjct: 587 RGNYGRLGHG---------SNDDVT----VPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG YG+ S + P VD + V ++ GG SA LT
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALT 683
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L I + V CGG + ALT++G +Y WG
Sbjct: 636 VFSWGDGDYGKLGRGG---SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWG 692
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
A +LG G NE + + + ++ ++ G +H L D ++G
Sbjct: 693 KGDAYRLGHG----------NEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742
Query: 125 WGYNSYGQ 132
WG N YGQ
Sbjct: 743 WGRNDYGQ 750
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S D +P V L G + VACG T +T+ G ++
Sbjct: 581 ELYTWGRGNYGRLGH---GSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D ++ V V CG + G+
Sbjct: 638 SWGDGDYGKLGRGGSDGSKT--PKIVDK--------LLDINVVRVFCGGQFSAALTARGE 687
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +++ L+ GG H LT+
Sbjct: 688 VYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTE 736
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PR+V AL G I +A G +H A + KG ++ WG
Sbjct: 4198 VYTWGKGDYHRLGHGT---DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 4254
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV + VACG +HTL +
Sbjct: 4255 DNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4296
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G G+LG D P V L+G+ + V CG + ALT G ++ WG
Sbjct: 3165 VYTWGDGDFGKLGRGG---SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWG 3221
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3222 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3269
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACS--LKELC 177
+ WG N +GQ N + PS V + + +++ G HS +L D + +E
Sbjct: 3270 YAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQEPV 3329
Query: 178 EFRLAES------VTLSNASEIEDVASRTGSEALAR 207
F+ A + L NA+E V + T + R
Sbjct: 3330 TFQTARDPLGQMCLGLGNAAEQNGVVATTSNAIATR 3365
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y+ G G+ G+LG + D ++P + ++ +FIK VA GG H AL+S+G +Y+
Sbjct: 3986 VYSTGYGAAGRLG---IGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYS 4042
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRD 119
WG G+LG G + +Y R P LV G+++V ACG H+
Sbjct: 4043 WGEGDDGKLGHGNRL-----------SYDR--PKLVEDLLGIEIVDIACGGHHSAAITSA 4089
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4090 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTL 4138
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4145 NVWSWGDGDYGKLGRGG---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTW 4201
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4202 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4249
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4250 VFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4293
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL QLG G K +P R L + +A G ++ +G LYA G
Sbjct: 2953 VYVWGLNDKDQLGGLK---GSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3009
Query: 65 GCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG IP S + + V G H L +DGK+
Sbjct: 3010 EGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVA----------VHSGGKHALALTQDGKV 3059
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + T P ++ + +R +A G GHSA +
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAI 3105
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G +LGH G++E + P+ + +L IKD++ GG H ALT +Y
Sbjct: 687 EVYTWGKGDAYRLGH-----GNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVY 741
Query: 62 AWGGCQAGQLG--LGPQTRSFSFIPNES 87
WG GQ+ LGP S P S
Sbjct: 742 GWGRNDYGQIDPTLGPVVSEPSLCPTLS 769
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G I VA G +H A+T G +YAW
Sbjct: 3216 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3272
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G R S + DT V+CG SH++ ++
Sbjct: 3273 GDNDHGQQGNGTTIVNRKPSLVHELDDTRMNR------------VSCGSSHSIAWI 3316
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVAC--GGVHTCALTSKGAL 60
+Y G G+ G+LG GD + P+ + L IK VA GG H ALT G +
Sbjct: 3005 LYACGEGTNGRLGL-----GDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKV 3059
Query: 61 YAWGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++WG + G+LG G T I + R+I ACG H+
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDI------------ACGSGHSAAIAS 3107
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+G+++ WG YG+ + + P V G+ V ++A G + ++
Sbjct: 3108 NGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMS 3158
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + +A G A+T+ G +Y+ G
Sbjct: 3934 IYGWGHNHRGQLGGLE---GAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTG 3990
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AG+LG+G T S +P T +I + + V G H L +G ++
Sbjct: 3991 YGAAGRLGIG-GTDSV-MVP----TLLESIQHVFIKKVA--VNSGGKHCLALSSEGHVYS 4042
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P V+ +G E+ +A GG HSA +T A
Sbjct: 4043 WGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSA 4089
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+R+ + + +A G H ALT G +Y+WG G+LG G
Sbjct: 492 GSETQYPQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHG------- 544
Query: 82 FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
N S + I L+ N + +ACG +++ G+++ WG +YG+ + +
Sbjct: 545 --DNISHDEPKLIETLLEKN-IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDV 601
Query: 142 WYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 602 TVPTLVTTLKGHMVVHVACGSGDSQTL 628
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4249 EVFTWGDNDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAW 4296
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
+A Q+R + P E D + IP V+ N + L+
Sbjct: 4297 STAKAT------QSRMPASAPMEYD-LVKEIPFSVLRNRLVLL 4332
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P V L G+ + D+A GG H+ ALT G +Y WG
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQ---PITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + L+V + V+CG +H++ RDG+++
Sbjct: 275 RGEHGRLGFGDNDKSSKMVPQRVN--------LLVGEDIVQVSCGGTHSVALTRDGRMYT 326
Query: 125 WGYNSYGQAANEKSTYAWYPS--PVD 148
+G +G+ + P P+D
Sbjct: 327 FGRGDHGRLGYGRKVTTGQPMEVPID 352
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 78/210 (37%), Gaps = 47/210 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E +P +V AL + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPP--ETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFR-------------------------------- 92
G + GQ G P+ + + P D
Sbjct: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWG 176
Query: 93 ------NIPILVVPNGVQ------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+I + VP VQ L+A G H L DG + WG N YGQ +
Sbjct: 177 QPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P V G + +AAGG HS LTD
Sbjct: 237 RSQPITVQGLSGLTLVDIAAGGWHSTALTD 266
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 23/147 (15%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P RV L+ + + +A G H AL G L+AWG + GQLG G D
Sbjct: 189 VPVRVQGLERVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTG-------------D 233
Query: 89 TYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKSTYAW 142
T R+ PI V +G+ LV A G H+ DG+++GWG +G+ N+KS+
Sbjct: 234 TQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM- 292
Query: 143 YPSPVDWCVGE-VRKLAAGGGHSAVLT 168
P V+ VGE + +++ GG HS LT
Sbjct: 293 VPQRVNLLVGEDIVQVSCGGTHSVALT 319
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG + + + + V AL+ ++ V G ++ A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCI---VKALEPYKVRSVVAGSRNSLAICDDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ + IP++ + L N VQ A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTEN-IPSQ-------VKALANVNIVQ-AAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAAN--EKSTYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E+ P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLT 167
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P+RV L G I V+CGG H+ ALT G +Y +
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSK-MVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTF 327
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG------------VQLVACGHS 111
G G+LG G + + P E +PI + P +LVA G
Sbjct: 328 GRGDHGRLGYGRKVTTGQ--PME-------VPIDIPPPKNLTDSGDAGRWIAKLVASGGR 378
Query: 112 HTLVYM 117
HTL +
Sbjct: 379 HTLAIV 384
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+ ++ ++ AWG + GQLG+G N + + I + P V+ V G ++
Sbjct: 1 MATESSVIAWGSGEDGQLGIG----------NNEEKEWVCIVKALEPYKVRSVVAGSRNS 50
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKST 139
L DGK+ WG+N G + T
Sbjct: 51 LAICDDGKLFTWGWNQRGTLGHPPET 76
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 80/209 (38%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E +P RV AL + I A GG H A+ +G YAWG
Sbjct: 59 MFTWGWNQRGTLGHQP--ETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLG-------LGPQTRSFSFIPNE------------------------------- 86
G + GQ G +G R IP
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D ++P+ V V+L+A G H L DG++ WG N YGQ +
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPT 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+P PV + +AAGG HS LTD
Sbjct: 237 SHPVPVQGLDDLTLVDIAAGGWHSTALTD 265
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG G GQLG + + +++ V AL+ ++ V G ++ A+ G ++ WG
Sbjct: 7 IIAWGSGEDGQLG---IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ + IP+ N+ I A G H L G+ +
Sbjct: 64 WNQRGTLGHQPETKTEN-IPSRVKA-LANVKIT-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEK-STYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG Q P V LD + + D+A GG H+ ALT KG +Y WG
Sbjct: 217 LLAWGNNEYGQLGTGDTQPTSH---PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNE 86
+ G+LGLG +S +P +
Sbjct: 274 RGEHGRLGLGDNDKSSKMVPQK 295
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P RV L+ + + +A G H AL G L AWG + GQLG G + +P +
Sbjct: 188 VPVRVQGLENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL 245
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKST 139
+ I A G H+ G+++GWG +G+ N+KS+
Sbjct: 246 DDLTLVDI----------AAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q P V LD + + D+A GG H+ ALT++G +Y WG
Sbjct: 217 LWAWGNNEYGQLGTGDTQP---RSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN--------LLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 76/209 (36%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E P V +L + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPP--ETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQ-------TRSFSFIPNE------------------------------- 86
G + GQ G P R IP
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D +IP+ V V+L+A G H L DG + WG N YGQ +
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPR 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+P PV + +AAGG HS LT+
Sbjct: 237 SFPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG L + +++ L V AL+ ++ V G ++ A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ S + + +++ + + VQ A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTES-----TPSLVKSLASVKI---VQ-AAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E S P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLT 166
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K +LP++V L G I V+CGG H+ ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP------------NG---VQLVAC 108
G G+LG G + + + +PI + P +G + VAC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIDIPPLEGRFNHTDEEDDGKWIAKHVAC 377
Query: 109 GHSHTLVYM 117
G HTL +
Sbjct: 378 GGRHTLAIV 386
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + V GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGRNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT G+ + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGVNTKGQLGH--EREGNK---PEQIGALADQHIVHVACGESHSLALSDQGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTIEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++ AGG HS L+
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIVH------------VACGESHSLALSDQGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y++G G+ G LGH + +S P V +L G+ I +ACG H+CALT +G L++W
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSS---PVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSW 111
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKI 122
G + GQLG G + + + +P+ + + + V CG +T+ DG++
Sbjct: 112 GRGKYGQLGCG-----------SVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL 160
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLT 168
WG+ +GQ + P V C E + + +AG H+ LT
Sbjct: 161 FSWGHGHWGQTGHGTQDNILVPKLV--CSLENDNIVQASAGARHAVALT 207
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G GQLG LPR + + VACG HT ALT G +Y++G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG G S + +S + G+ +ACG +H+ +G++
Sbjct: 61 QGTFGALGHGTTESCSSPVIVDS----------LWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG YGQ P PV
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPV 133
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLG S+ + L P V AL + V CG +T A+ S G L++W
Sbjct: 107 QLFSWGRGKYGQLGCGSV---ENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSW 163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQ G G Q +P LV + + + G H + G
Sbjct: 164 GHGHWGQTGHGTQDNIL-------------VPKLVCSLENDNIVQASAGARHAVALTSGG 210
Query: 121 KIHGWGYNSYGQ 132
++ WG N GQ
Sbjct: 211 GVYAWGDNEQGQ 222
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQ GH + D L+P+ V +L+ I + G H ALTS G +YAW
Sbjct: 159 QLFSWGHGHWGQTGHGTQ---DNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAW 215
Query: 64 GGCQAGQL 71
G + GQ+
Sbjct: 216 GDNEQGQV 223
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSF-SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L +WG + GQLGL F S +P + R L+ VACG SHTL
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFNSPLPR----FLRGSRELLFVR----VACGSSHTLALTG 52
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLT 168
G ++ +G ++G + + P VD W +G V ++A G HS LT
Sbjct: 53 SGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIV-QIACGDNHSCALT 103
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 52/208 (25%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
D+YTWGLG G+LGH GD +L P+ V AL+G + VA G T ALT G
Sbjct: 3074 DLYTWGLGEYGRLGH-----GDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128
Query: 60 LYAWGGCQAGQLGLG---------PQTR-------------SFSFIPNES---------- 87
+Y+WG G+LG G P R FS +S
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGD 3188
Query: 88 --------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
D + R ++ G ++ VA G H L + +G+++ WG N +GQ N
Sbjct: 3189 YFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNST 3248
Query: 138 STYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+T P+ V G ++ ++A G HS
Sbjct: 3249 TTVNRKPALVQGLEGCKISRVACGSSHS 3276
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL ++D+ACGG H+ A+ S G LY WG
Sbjct: 3023 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWG 3079
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G T T R P LV V VA G + TL
Sbjct: 3080 LGEYGRLGHGDNT-----------TQLR--PKLVKALEGQRVIQVALGSRDAQTLALTDS 3126
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G ++ WG +G+ S P P++ G V ++ G S LT +
Sbjct: 3127 GTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKS 3178
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + D+ PR + +L G + D+A GG H+ +TS G LY+W
Sbjct: 4043 EVYSWGEGEDGKLGHGNRSPCDR---PRAIESLRGKEVVDIAAGGAHSACITSTGELYSW 4099
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGH--SHTLVYMR 118
G + G+LG G D+ + P LV G ++ VACG + TL
Sbjct: 4100 GKGRYGRLGHG-------------DSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITD 4146
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4147 DDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKS 4199
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G+LGH + D +L + L G + +VACG H+ A+T+ G L+ W
Sbjct: 498 DVYSWGNGDFGKLGHGDTVTCDSPML---INELHGKSVVNVACGSHHSAAITASGELFTW 554
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G G+LGLG + D + ++ V VACG + T+ G
Sbjct: 555 GRGSFGRLGLG----------STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGS 604
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
++ WG YG+ S P VD G +V ++ G +SA +
Sbjct: 605 VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ AL G+ + V CG + ALT GA+Y WG
Sbjct: 4150 VWSWGDGDYGKLGRGG---SDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWG 4206
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
+LG G ++ + R G ++V ACG H + G++
Sbjct: 4207 KGDYHRLGHG------------TEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEV 4254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + + P V G ++ ++A G HS
Sbjct: 4255 YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHS 4297
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PRR L G I +ACG +H A T G +Y WG
Sbjct: 4202 VYTWGKGDYHRLGHGT---EDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWG 4258
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
GQLG G T P LV + VACG +H+L + +
Sbjct: 4259 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKP 4305
Query: 122 IHG 124
++
Sbjct: 4306 VNA 4308
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
+++TWG GS G+LG L S + L P V L G+ + DVACG T AL G++Y
Sbjct: 550 ELFTWGRGSFGRLG---LGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVY 606
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG + G+LG G + P D + V V CG ++ ++G
Sbjct: 607 SWGDGEYGKLGRGGSEGCKA--PKLVDK--------LQGLDVTRVYCGPQYSAAVCKNGA 656
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ WG + + + +P V+ G+ V L+ G H T+
Sbjct: 657 VFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE 705
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
PR++ +L IK VA GG H ALT G +++WG G+LG FS + +
Sbjct: 2991 PRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG------HFSRMNCDK 3044
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ V+ +ACG SH+ + +G ++ WG YG+ + +T P V
Sbjct: 3045 PRLIEAL----RSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLV 3100
Query: 148 DWCVGE-VRKLAAGG--GHSAVLTDA 170
G+ V ++A G + LTD+
Sbjct: 3101 KALEGQRVIQVALGSRDAQTLALTDS 3126
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LG G E P+ V L G+ + V CG ++ A+ GA++
Sbjct: 605 VYSWGDGEYGKLGR-----GGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFT 659
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + +LG G T P + +T + V ++ G H L +G++
Sbjct: 660 WGNGEGYKLGHG--TEEHVRFPRQVET--------LAGKHVTSLSLGSHHCLATTEEGEL 709
Query: 123 HGWGYNSYGQ 132
WG N GQ
Sbjct: 710 LSWGRNDKGQ 719
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D P + ++ +FI+ VA GG H AL+++G +Y+WG + G+LG G RS
Sbjct: 4007 DSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG--NRSPCD 4064
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
P R I L V +A G +H+ G+++ WG YG+ + S
Sbjct: 4065 RP-------RAIESLRGKEVVD-IAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQT 4116
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVL 167
P VD G V +A G G + L
Sbjct: 4117 KPKLVDALKGYRVTDVACGSGDAQTL 4142
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G +LGH + K P+ V L G + VA G +H ++ G +YAWG
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRK---PQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWG 3237
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 116
GQ G N + T R ++ G ++ VACG SH++ +
Sbjct: 3238 DNDHGQQG------------NSTTTVNRKPALVQGLEGCKISRVACGSSHSIAW 3279
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG G +LGH G +E PR+V L G + ++ G H A T +G L +
Sbjct: 657 VFTWGNGEGYKLGH-----GTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLS 711
Query: 63 WGGCQAGQLGLG 74
WG GQLG G
Sbjct: 712 WGRNDKGQLGEG 723
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQ 104
G H ALTS+G +Y+WG G+LG G DT + P+L+ V
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHG-------------DTVTCDSPMLINELHGKSVV 533
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 163
VACG H+ G++ WG S+G+ + P+ V +G V +A G G
Sbjct: 534 NVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGD 593
Query: 164 SAVLTDA 170
+ + A
Sbjct: 594 AQTIALA 600
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K P L + + G +T G L
Sbjct: 2912 IQTQVFVWGLNDKDQLGG---PKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKL 2968
Query: 61 YAWGGCQAGQLGLG------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
+A G G+LGLG PQ R + + S + + V G H +
Sbjct: 2969 FACGEATNGRLGLGISAGNVPQPRQLTSL---SQYVIKKVA----------VHSGGRHAM 3015
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
DGK+ WG G+ + P ++ + VR +A GG HSA +
Sbjct: 3016 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAI 3069
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG H+ A ++ +
Sbjct: 4253 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHSLAWSTNKPV--- 4306
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
AG+L + IP E ++ +++PI V+ N + L+
Sbjct: 4307 ---NAGKLP--------AQIPMEYNS-LQSLPINVLRNRLVLL 4337
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y++G G+ G LGH + +S P V +L G+ I +ACG H+CALT +G L++W
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSS---PVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSW 111
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKI 122
G + GQLG G + + + +P+ + + + V CG +T+ DG++
Sbjct: 112 GRGKYGQLGCG-----------SVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL 160
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDA 170
WG+ +GQ + P V C E + + +AG H+ LT
Sbjct: 161 FSWGHGHWGQTGHGTQDNILVPKLV--CSLENDNIVQASAGARHAVALTSG 209
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G GQLG LPR + + VACG HT ALT G +Y++G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG G S + +S + G+ +ACG +H+ +G++
Sbjct: 61 QGTFGALGHGTTESCSSPVIVDS----------LWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG YGQ P PV
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPV 133
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLG S+ + L P V AL + V CG +T A+ S G L++W
Sbjct: 107 QLFSWGRGKYGQLGCGSV---ENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSW 163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQ G G Q +P LV + + + G H + G
Sbjct: 164 GHGHWGQTGHGTQDNIL-------------VPKLVCSLENDNIVQASAGARHAVALTSGG 210
Query: 121 KIHGWGYNSYGQ 132
++ WG N GQ
Sbjct: 211 GVYAWGDNEQGQ 222
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQ GH + D L+P+ V +L+ I + G H ALTS G +YAW
Sbjct: 159 QLFSWGHGHWGQTGHGTQ---DNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAW 215
Query: 64 GGCQAGQL 71
G + GQ+
Sbjct: 216 GDNEQGQV 223
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSF-SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L +WG + GQLGL F S +P + R L+ VACG SHTL
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFTSPLPR----FLRGSRELLFVR----VACGSSHTLALTG 52
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLT 168
G ++ +G ++G + + P VD W +G V ++A G HS LT
Sbjct: 53 SGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIV-QIACGDNHSCALT 103
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG S G+LG + S +P +V L G+ D G H+ A+ S G ++ WG
Sbjct: 615 VWTWGSNSFGELGDGTTTS---RSVPVQVQGLSGVVAVD--AGNSHSLAVRSDGTVWTWG 669
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G TR R++P+ V +GV +A G H LV DG +
Sbjct: 670 YNSYGQLGDGTTTR-------------RSVPVQVPGLSGVVAMATGALHPLVVRSDGTVW 716
Query: 124 GWGYNSYGQAANEKSTYA 141
WGYNS+GQ N +A
Sbjct: 717 AWGYNSFGQLGNGSPLFA 734
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D ++ WG S G+LG + L+P RV L G VA GG H+ + S G
Sbjct: 559 VHSDGSVWAWGSNSSGELGDGTTS---NRLVPGRVPGLSGGVA--VAAGGFHSLVVRSDG 613
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYM 117
++ WG G+LG G T R++P+ V +GV V G+SH+L
Sbjct: 614 TVWTWGSNSFGELGDGTTTS-------------RSVPVQVQGLSGVVAVDAGNSHSLAVR 660
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WGYNSYGQ + +T P V G V +A G H V+
Sbjct: 661 SDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSGVV-AMATGALHPLVV 709
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + L P RV L G+ VA G ++ A+ S G ++AWG
Sbjct: 117 VWAWGSNSDGQLGDGTTT---MRLTPVRVQGLSGVV--SVAAGSSYSLAVRSDGTVWAWG 171
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T S +P + +P L +GV VA G SH+L + DG +
Sbjct: 172 SNFSGQLGDG--TTSNRLVPVQ-------VPGL---SGVVSVAAGSSHSLAVLSDGSVWA 219
Query: 125 WGYNSYGQ 132
WG NS GQ
Sbjct: 220 WGANSSGQ 227
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + P +V L G+ VA G H+ AL S G+++AWG
Sbjct: 417 VWAWGSNDSGQLGDGTTR---NSTSPVQVQGLSGVVA--VAAGFDHSLALRSDGSVWAWG 471
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG E T R +P+ V+ +GV VA G +H+L DG +
Sbjct: 472 SNAYGQLG-------------EGTTTNRLVPVQVL-SGVVAVAAGSNHSLAVRSDGTVWT 517
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N YGQ + ++ P V G V +AAG HS AV +D
Sbjct: 518 WGSNLYGQLGDGTTSNRLVPVQVQGLSG-VAAVAAGSFHSLAVHSDGS 564
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + L+P +V L G+ VA G H+ A+ S G+++AWG
Sbjct: 515 VWTWGSNLYGQLGDGTTS---NRLVPVQVQGLSGV--AAVAAGSFHSLAVHSDGSVWAWG 569
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LG G T S +P +P L +G VA G H+LV DG +
Sbjct: 570 SNSSGELGDG--TTSNRLVPGR-------VPGL---SGGVAVAAGGFHSLVVRSDGTVWT 617
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG NS+G+ + +T P V G V + AG HS AV +D
Sbjct: 618 WGSNSFGELGDGTTTSRSVPVQVQGLSGVV-AVDAGNSHSLAVRSDGT 664
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG S GQLG + L+P RV L G+ DV G H+ AL S G+++AWG
Sbjct: 267 VWTWGANSFGQLGDGTKS---DRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWG 321
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG + + R++P+ V +G V G SH+L DG +
Sbjct: 322 HNSSGQLG-------------DDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVW 368
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG N G+ + P V G V +AAG HS
Sbjct: 369 AWGSNFSGERGEGTTNNRASPVQVQGLGGGV-AVAAGFNHS 408
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + L+P +V L G+ VA G H+ A+ S G ++ WG
Sbjct: 467 VWAWGSNAYGQLGEGTTT---NRLVPVQV--LSGVVA--VAAGSNHSLAVRSDGTVWTWG 519
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R +P+ V +GV VA G H+L DG +
Sbjct: 520 SNLYGQLG-------------DGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVW 566
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS G+ + ++ P V G V +AAGG HS V+
Sbjct: 567 AWGSNSSGELGDGTTSNRLVPGRVPGLSGGV-AVAAGGFHSLVV 609
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+ G + + P +V L G VA G H+ A S G+++AWG
Sbjct: 367 VWAWGSNFSGERGEGTT---NNRASPVQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWG 421
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G S S P+ V +GV VA G H+L DG +
Sbjct: 422 SNDSGQLGDGTTRNSTS-------------PVQVQGLSGVVAVAAGFDHSLALRSDGSVW 468
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N+YGQ +T P V + V +AAG HS AV +D
Sbjct: 469 AWGSNAYGQLGEGTTTNRLVPVQV---LSGVVAVAAGSNHSLAVRSDGT 514
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 90/231 (38%), Gaps = 47/231 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + L+P +V L G+ VA G H+ A+ S G+++AWG
Sbjct: 167 VWAWGSNFSGQLGDGTTS---NRLVPVQVPGLSGVV--SVAAGSSHSLAVLSDGSVWAWG 221
Query: 65 GCQAGQLGLGPQ---------------------------TRSFSFIPNESDTYF------ 91
+GQLG G + RS + F
Sbjct: 222 ANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDG 281
Query: 92 ----RNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
R +P+ V +GV G H+L DG + WG+NS GQ ++ ST P
Sbjct: 282 TKSDRLVPVRVQGLSGVVASDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQ 341
Query: 147 VDWCVGEVRKLAAGGGHS-AVLTDACSLKELCEF--RLAESVTLSNASEIE 194
V G + + AG HS AV +D F E T + AS ++
Sbjct: 342 VRGLSGGM-AVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQ 391
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G ++ AL G ++A G GQLG G T + + +P L +GV
Sbjct: 51 LAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPV---------QVPGL---SGV 98
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
VA G SH+L DG + WG NS GQ + +T P V G V +AAG +
Sbjct: 99 VAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSGVV-SVAAGSSY 157
Query: 164 S-AVLTDAC 171
S AV +D
Sbjct: 158 SLAVRSDGT 166
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4104 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4160
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G G+LGLG S +P E T I N VACG +HTL DG
Sbjct: 4161 GNGDYGRLGLG--NTSNKKLP-ERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADG 4217
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4218 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4267
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4220 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L VV ++ VA G HTL G +
Sbjct: 4277 --QDRLIGL-PEGRA------RNHNRPQQIPVLAGVV---IEDVAVGAEHTLALASTGDV 4324
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4325 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 476 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 532
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 533 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 579
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 580 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 628
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 581 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 635
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 636 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 678
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 679 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 732
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4000 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLAC 4053
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4054 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4098
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4099 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4152
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4054 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4111 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4160
Query: 126 GYNSYGQ 132
G YG+
Sbjct: 4161 GNGDYGR 4167
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 371 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 473
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 474 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 683 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 740
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 741 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 781
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 4105 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4161
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HT+ DG
Sbjct: 4162 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG 4208
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 4258
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDG 120
WG G+LG G D+ RNIP LV + N V V+CG SHT+ +DG
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDIIN-VGEVSCGSSHTIALSKDG 580
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ + +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 581 RTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4211 VWAFGDGDYGKLG---LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L GV + +A G HTL G +
Sbjct: 4268 --QDRLIGL-PEGRA------RNHNRPQQVPLLA---GVFIEDIAVGAEHTLALSSTGDV 4315
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4316 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWT 734
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 4001 DVYLWGAGRHGQLA----EAGRNVMIPAAAPSFSP--AQQVVCGQNCTFVIQANGTVLAC 4054
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4055 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4099
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4100 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4055 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4112 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 4161
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLTD 169
G YG+ ++ P V G ++ ++A G H+ AV TD
Sbjct: 4162 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTD 4207
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLASSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ + D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPS 783
>gi|356524449|ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 444
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G LGH +EL PR V IK +A G HT A+T G LY W
Sbjct: 170 EVFTWGYGGFGALGHSVYH---RELFPRLVKGSWEGTIKHIATSGTHTAAITESGELYIW 226
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G + G +IP V +P + V+CG T+ DG+
Sbjct: 227 GRDE------GDGRLGLGPGRGPDHAGGLSIPSKVKELPYPIAAVSCGGFFTMALTVDGQ 280
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ WG NS + W P PV ++ +LA+GG HS LTD
Sbjct: 281 LWNWGANSNYELGRGDKIGGWKPRPVPSLENVKIIQLASGGYHSLALTD 329
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 48/199 (24%)
Query: 3 LDIYTWGLGSVGQLG-----------------------HCSLQSGDKELLP---RRVVAL 36
L + +WG G+ GQLG S G + LLP +R + +
Sbjct: 45 LQVLSWGKGASGQLGGGVEETRLYPSPVANLAVPKSSFALSQTPGRRRLLPSPPKRALEV 104
Query: 37 DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI 96
++CG H+ +L GAL+ WG G+LG G + F +P + + N+
Sbjct: 105 G------LSCGLFHS-SLIVDGALWIWGKGDGGRLGFGHENPLF--VPTL-NPHLDNL-- 152
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEV 154
VA G H++ DG++ WGY +G + +P V W G +
Sbjct: 153 -------LSVALGGLHSVALTSDGEVFTWGYGGFGALGHSVYHRELFPRLVKGSW-EGTI 204
Query: 155 RKLAAGGGHSAVLTDACSL 173
+ +A G H+A +T++ L
Sbjct: 205 KHIATSGTHTAAITESGEL 223
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P +V L I V+CGG T ALT G L+ WG +LG G + + P S
Sbjct: 251 IPSKVKELP-YPIAAVSCGGFFTMALTVDGQLWNWGANSNYELGRGDKIGGWKPRPVPS- 308
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
N+ I +QL + G+ H+L DGK+ WG+ GQ + P+ V+
Sbjct: 309 --LENVKI------IQLASGGY-HSLALTDDGKVLSWGHGGQGQLGHGSIQNQKIPAVVE 359
Query: 149 WCVGE-VRKLAAGGGHSAVLTDACSL 173
E + ++ GG SA +TD L
Sbjct: 360 ALAHENIIYISCGGSSSAAVTDNGKL 385
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S +LG G K PR V +L+ + I +A GG H+ ALT G + +W
Sbjct: 280 QLWNWGANSNYELGRGDKIGGWK---PRPVPSLENVKIIQLASGGYHSLALTDDGKVLSW 336
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 120
G I N+ IP +V + ++CG S + +G
Sbjct: 337 GHGGQ-------GQLGHGSIQNQ------KIPAVVEALAHENIIYISCGGSSSAAVTDNG 383
Query: 121 KIHGWG 126
K++ WG
Sbjct: 384 KLYMWG 389
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALY 61
+ WG G +LGH S KE PR + ++L G ++D+ACG HT AL G LY
Sbjct: 230 EAMAWGNGDKYRLGH---GSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALIESGELY 285
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG G+LGLG N+ + R+ + P + + CG SH+L DG+
Sbjct: 286 AWGNGSNGRLGLGDT--------NDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGR 337
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG N+ GQ + + W ++
Sbjct: 338 AYAWGKNNQGQCGHGHTNDQWTIQEIE 364
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Query: 5 IYTWGLGSVGQLGH-----CSLQSG---DKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
+ ++G G G+LGH S Q G + +++P + A + + + H+ A+T+
Sbjct: 168 LMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAITA 227
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
KG AWG +LG G ++ ++ R I L + V+ +ACG HTL
Sbjct: 228 KGEAMAWGNGDKYRLGHGSSSKEYT---------PRTIEFLSLKGRVRDLACGLGHTLAL 278
Query: 117 MRDGKIHGWGYNSYGQ 132
+ G+++ WG S G+
Sbjct: 279 IESGELYAWGNGSNGR 294
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G+ G+LGH +S D +P V +DG +KD G HT LT L+ G
Sbjct: 459 VYTWGSGANGKLGHGDEESFD---IPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCG 515
Query: 65 GCQAGQLGLG-PQTR 78
+G+LG G QTR
Sbjct: 516 QGDSGRLGHGDSQTR 530
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG GS G+LG L + P R ++ + + + CG H+ L+ G Y
Sbjct: 283 ELYAWGNGSNGRLG---LGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAY 339
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG GQ G G ++ ES FR+ V A G HTL G+
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIES---FRDTEEGEEEEFVVYAAGGWEHTLFCTASGR 396
Query: 122 IH--GWGYNSYGQA 133
++ G GY +A
Sbjct: 397 VYSCGCGYKDSRRA 410
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 25 DKELLPRRVVALDGIF--IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D+ L P V ALD + VACG H+ A+T+ G +Y WG G+LG G + SF
Sbjct: 422 DRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDE-ESF-- 478
Query: 83 IPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+IP LV V+ G HT+ D ++ G G+ + S
Sbjct: 479 ----------DIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQ 528
Query: 140 YAWYPSPVD 148
P+ ++
Sbjct: 529 TRKRPTKIE 537
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 3575 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 3631
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HT+ DG
Sbjct: 3632 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDG 3678
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 3728
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 3681 VWAFGDGDYGKLG---LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 3737
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L +GV + +A G HTL G +
Sbjct: 3738 --QDRLIGL-PEGRA------RNHNRPQQVPVL---SGVFIEDIAVGAEHTLALSSTGDV 3785
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ + G+ +R+++AG HSA T
Sbjct: 3786 YAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWT 734
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P V A + V CG T + + G + A
Sbjct: 3471 DVYLWGAGRHGQLA----EAGRNVMVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 3524
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 3525 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 3569
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 3570 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3623
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 3525 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 3582 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 3631
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 3632 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS 3675
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS---KGAL 60
++Y WG S+GQ G + S P++V LDG+ I+ ++ G H+ A T+ +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ + D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPS 783
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 17/123 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH + DK++ P V +L GI I+ + G HT AL+++G +YA+G
Sbjct: 943 VFTWGWGVHGQLGH---GNTDKKMTPTLVTSLLGIVIRFITAGHAHTLALSTEGIIYAFG 999
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+G +S ++PI V + + L+A G+ H L K++
Sbjct: 1000 CNIFGQLGVGNNIKS-------------SVPIKVSLSERIILIATGYFHNLAVSCTNKLY 1046
Query: 124 GWG 126
WG
Sbjct: 1047 IWG 1049
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 4 DIYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G LG L+ G +++ + I + V+CG HT A+T+ G +Y
Sbjct: 836 NVYTWGSSVQGCLGTGPSVLRYGSPQVI--SFFWIMEIEVLSVSCGHCHTLAVTNNG-VY 892
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMR 118
AWG Q GQLGLG + + P L+ +++ G H++
Sbjct: 893 AWGSSQFGQLGLGKILQC-------------STPELITSLAQEVIIDAVAGQYHSVALTS 939
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
DG++ WG+ +GQ + + P+ V +G V R + AG H+ L+
Sbjct: 940 DGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTLALS 990
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 5 IYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y WG GQLG CS P + +L I D G H+ ALTS G
Sbjct: 891 VYAWGSSQFGQLGLGKILQCST--------PELITSLAQEVIIDAVAGQYHSVALTSDGR 942
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
++ WG GQLG G + + P LV ++ + GH+HTL
Sbjct: 943 VFTWGWGVHGQLGHGNTDKKMT-------------PTLVTSLLGIVIRFITAGHAHTLAL 989
Query: 117 MRDGKIHGWGYNSYGQ 132
+G I+ +G N +GQ
Sbjct: 990 STEGIIYAFGCNIFGQ 1005
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
F + C G AL G +Y WG G LG GP + S + I +L
Sbjct: 817 FKRRPLCAGFSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISFFWIMEIEVLS- 875
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA- 158
V+CGH HTL +G ++ WG + +GQ K P + EV A
Sbjct: 876 ------VSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAV 928
Query: 159 AGGGHSAVLT 168
AG HS LT
Sbjct: 929 AGQYHSVALT 938
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ I +ACG HT ALT +G LYAW
Sbjct: 207 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAW 263
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G ++ S P+ ++ V++ AC +HT +
Sbjct: 264 GANTYGQLGTGNKSNQLS-------------PLQIMMEKERVVEIAACHSAHTSAAKTQS 310
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 311 GQVYMWG 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PRRV L + +ACG + A+ + G +Y
Sbjct: 154 DLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYG 210
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLGLG + P V +GV + +ACG++HTL +
Sbjct: 211 WGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACGYAHTLALTDE 257
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
G ++ WG N+YGQ + SP+ + + R + HSA
Sbjct: 258 GLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKERVVEIAACHSA 301
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK------ELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
++Y WG QLG+ + G LL ++V+ +VACG H+ AL+
Sbjct: 101 EVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVI--------EVACGSHHSMALSFD 152
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G LYAWG GQ+G G P R + + V +ACG + ++ +
Sbjct: 153 GDLYAWGYNNCGQVGSGSTANQ----PTP-----RRVSNCLQDKMVVGIACGQTSSMAVV 203
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+G+++GWGYN GQ + P V G + ++A G H+ LTD
Sbjct: 204 NNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ +GL LG QS ++P+++ AL G I ++ G G H T G +YA
Sbjct: 48 EVFVFGLNCSNCLGTGDSQS---TIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYA 104
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + + P+ V N V VACG H++
Sbjct: 105 WGHNGYSQLGNGATNQGVT-------------PVQVCTNLLLKKVIEVACGSHHSMALSF 151
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG ++ WGYN+ GQ + + P V C+ + + G ++ +
Sbjct: 152 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 200
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 93/253 (36%), Gaps = 57/253 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 260 LYAWGANTYGQLG-----TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 62 AWGGCQAGQLGLGPQTRSFS-------------------------FI------------P 84
WG C+ GQ + P F+ F+ P
Sbjct: 315 MWGQCR-GQSVVLPHLTHFACTDDVFACFATPAVMWRLLSVEQEDFLTVAESLKKEFDSP 373
Query: 85 NESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
SD FR + + V V + C H T+ W + ++ +Y Y
Sbjct: 374 ETSDLKFRVDGKYIHVHKAVLKIRCEHFRTMFQSY------WNEDMKEVIEVDQFSYPVY 427
Query: 144 PSPVDWCVGEVRKLAA--GGGHSAVLTDACS--LKELCEFRLAESVTLSNASEIEDVASR 199
+ +++ + L G + T C LK+LC+ + +T+ NA + A R
Sbjct: 428 RAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLLSAAVR 487
Query: 200 TGSEALARLCERL 212
+E L C +
Sbjct: 488 YDAEDLEDFCFKF 500
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 4083 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4139
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G+ + VACG +HTL DG
Sbjct: 4140 GNGDYGRLGLG-------------NTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADG 4186
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4187 SLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4236
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P V+ G RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALT 630
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4189 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4245
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L+ G+ + +A G HTL G++
Sbjct: 4246 --QDRLIGL-PEGRA------RNHNRPQLVPVLL---GIFIDDIAVGAEHTLALSASGEV 4293
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG NS GQ + + P+ V G+ +R+++AG HSA T A
Sbjct: 4294 YAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTAA 4342
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ V AL G+F + V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3979 DVFLWGAGRHGQLA----EAGRNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLAC 4032
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4033 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4077
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4078 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4131
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4033 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4089
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4090 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLFTF 4139
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G YG+ ++ P V G + ++A G H+ ++ SL
Sbjct: 4140 GNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSL 4188
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL + +K L P+ + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVEGT---QEKILQPKLAPCFSDA--QTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3254 ELYTWGLGEYGRLGH-----GDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGA 3308
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVIQIECGAQFSLALTRA 3358
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3359 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDA 3410
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V L I+DVACG H+ A++S+G LY WG
Sbjct: 3203 VFSWGEGEDGKLGHGNRTTLDK---PRLVETLRSKKIRDVACGSSHSAAISSQGELYTWG 3259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + L +Q VACG + TL DG +
Sbjct: 3260 LGEYGRLGHG---------DNSTQLKPKLVAALAGRRVIQ-VACGSRDAQTLALTEDGAV 3309
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3310 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRA 3358
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ +LGH + D + LP V+AL I DVA G H+ LTS+G +Y
Sbjct: 691 NLYTWGRGTYARLGHGN---SDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVY 747
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S S P+LV +P VQ V G ++ D
Sbjct: 748 AWGDADYGKLGNGNLNGSMS-------------PVLVESLPK-VQRVFAGAQFSMALTTD 793
Query: 120 GKIHGWGYNS-YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G+++ WG S G E+S WC V +L +G H ++
Sbjct: 794 GQLYSWGKASCLGHQLVERS--------AQWC--SVPRLISGLQHKRIV 832
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4343 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 4399
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4400 GKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDI----------ACGSGDAQTLCINDDDN 4449
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4450 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 4499
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 1 MHLDI----YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL 54
M +DI Y+WG G +LGH GD +P ++ LD +K V CG ++ A+
Sbjct: 633 MAIDINRNAYSWGNGEDHRLGH-----GDTHARAVPTKITLLDRC-VKAVFCGCSYSAAI 686
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SH 112
T G LY WG +LG G N D + + + + + VA G +H
Sbjct: 687 TCSGNLYTWGRGTYARLGHG----------NSDDQPLPTVVMALTEHEIIDVALGSGDAH 736
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+L +G ++ WG YG+ N + P V+ + +V+++ AG S LT
Sbjct: 737 SLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVE-SLPKVQRVFAGAQFSMALT 791
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4449 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 4505
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4506 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4553
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4554 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3360 EVWTWGKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3415
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3416 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3459
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4306 ADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM---- 4361
Query: 82 FIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4362 -------SYDR--PKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4412
Query: 139 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4413 EDQLRPQLVEALLGYRAIDIACGSGDAQTL 4442
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 26/181 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3149 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3205
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R+ P +T + ++ VACG SH+ G++
Sbjct: 3206 WGEGEDGKLGHG--NRTTLDKPRLVET--------LRSKKIRDVACGSSHSAAISSQGEL 3255
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLA 182
+ WG YG+ + ++ P KL A V+ AC ++ L
Sbjct: 3256 YTWGLGEYGRLGHGDNSTQLKP-----------KLVAALAGRRVIQVACGSRDAQTLALT 3304
Query: 183 E 183
E
Sbjct: 3305 E 3305
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3365
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3366 KGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3413
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3414 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3456
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G + G +YA G
Sbjct: 3097 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACG 3153
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3154 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 3205
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAIS 3250
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG S LGH ++ + +PR + L I DVA G H AL+S G ++
Sbjct: 795 QLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFG 852
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
WG + Q + P + S S+ R +PILV + VAC S +L++ +
Sbjct: 853 WGRNDSQQ--ICPSSVS-------SEPLLR-VPILVALPTLPASGVACTASQSLIWTQSS 902
Query: 121 K 121
+
Sbjct: 903 R 903
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M +IY+WG GQLG L D + P + ALD ++ +ACGG HT LT G +
Sbjct: 326 MSGNIYSWGRNDFGQLG---LGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLV 382
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM 117
+ +G + GQLG N + R P LV N V +ACG HTL Y+
Sbjct: 383 FTFGAGKHGQLG-----------HNSTQNELR--PRLVTELAGNRVTQIACGRQHTLAYV 429
Query: 118 RD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
D GK+ +G GQ N + P P+ E
Sbjct: 430 SDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 466
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G Q S + IP + IP++
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIA-IPQIVEN-LSGIPLVQ-- 313
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 159
++ G +H++ G I+ WG N +GQ + +PS ++ + V LA
Sbjct: 314 -----ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLAC 368
Query: 160 GGGHSAVLT 168
GG H+A+LT
Sbjct: 369 GGSHTALLT 377
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG S + +P+ V L GI + ++ G H+ AL+ G +Y+W
Sbjct: 276 ELFAWGQNLHGQLGIGSQFASIA--IPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSW 333
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG T ++ P L+ V+ +ACG SHT + +DG
Sbjct: 334 GRNDFGQLGLG-------------HTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDG 380
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V G V ++A G H+
Sbjct: 381 LVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHT 425
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ I +ACG HT ALT +G LYAW
Sbjct: 207 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAW 263
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G ++ S P+ ++ V++ AC +HT +
Sbjct: 264 GANTYGQLGTGNKSNQLS-------------PLQIMMEKERVVEIAACHSAHTSAAKTQS 310
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 311 GQVYMWG 317
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PRRV L + +ACG + A+ + G +Y
Sbjct: 154 DLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYG 210
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLGLG + P V +GV + +ACG++HTL +
Sbjct: 211 WGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACGYAHTLALTDE 257
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
G ++ WG N+YGQ + SP+ + + R + HSA
Sbjct: 258 GLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKERVVEIAACHSA 301
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK------ELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
++Y WG QLG+ + G LL ++V+ +VACG H+ AL+
Sbjct: 101 EVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVI--------EVACGSHHSMALSFD 152
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G LYAWG GQ+G G P R + + V +ACG + ++ +
Sbjct: 153 GDLYAWGYNNCGQVGSGSTANQ----PTP-----RRVSNCLQDKMVVGIACGQTSSMAVV 203
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+G+++GWGYN GQ + P V G + ++A G H+ LTD
Sbjct: 204 NNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ +GL LG QS ++P+++ AL G I ++ G G H T G +YA
Sbjct: 48 EVFVFGLNCSNCLGTGDSQS---TIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYA 104
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + + P+ V N V VACG H++
Sbjct: 105 WGHNGYSQLGNGATNQGVT-------------PVQVCTNLLLKKVIEVACGSHHSMALSF 151
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG ++ WGYN+ GQ + + P V C+ + + G ++ +
Sbjct: 152 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 200
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 260 LYAWGANTYGQLG-----TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P F+
Sbjct: 315 MWGQCR-GQSVVLPHLTHFA 333
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WGL G C S D EL P V +L GI I+ VA G HT ++ G +YA+GG
Sbjct: 311 FGWGL-----YGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGG 365
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G ++++T R + + N V+ ++CG HT + +GK+
Sbjct: 366 NQFGQLGTG---------SDQAETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFS 416
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 417 WGWNKYGQ 424
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 21/159 (13%)
Query: 23 SGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
SGD L +P V G+ I VA GG HT L+ G ++ WG GQLGLG + R
Sbjct: 197 SGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMV 256
Query: 81 S---FIP-----------NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
S IP S+ + IP + ++ +ACG H+ V G + +G
Sbjct: 257 SSPHIIPCIDSSSLVQGSMSSEGHNFRIP----GSCIKAIACGGRHSAVITDAGAVLAFG 312
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ YGQ + P+ V +G ++ +AAG H+
Sbjct: 313 WGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHT 351
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 4 DIYTWGLGSVGQLGHCS----------LQSGDKELLPRRVVA-------LDGIFIKDVAC 46
++ WG G GQLG S + D L + ++ + G IK +AC
Sbjct: 235 QVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEGHNFRIPGSCIKAIAC 294
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL- 105
GG H+ +T GA+ A+G GQ G G S P + G+Q+
Sbjct: 295 GGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELS--PTCVSSLL----------GIQIE 342
Query: 106 -VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGG 161
VA G HT+ DG ++ +G N +GQ P +D E V+ ++ G
Sbjct: 343 GVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGA 402
Query: 162 GHSAVLTD 169
H+A++TD
Sbjct: 403 RHTALVTD 410
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T+G G GQ GH S + +L P + +L GI I+ +A G HT +T G +Y +G
Sbjct: 309 LLTFGWGLYGQCGHGST---NDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFG 365
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKIH 123
G Q GQLG G ++ +T R + + + V++V+CG H+ + + DG++
Sbjct: 366 GNQFGQLGTG---------ASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVF 416
Query: 124 GWGYNSYGQAANEKSTYAWYPS--PVDWCVGEVRKLAAGGGHSAVLTD 169
WG+N YGQ S P+ P++ C + +A G H+ +L +
Sbjct: 417 SWGWNKYGQLGVGDSIDRNTPTQVPIEGC--RPKMVACGWWHTLLLAE 462
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS---FIP 84
+ P V G+ I VA GG HT AL+ G ++ WG GQLGLG + + S IP
Sbjct: 197 VTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIP 256
Query: 85 -NESDTYFR-----------NIPILV--VPNG-VQLVACGHSHTLVYMRDGKIHGWGYNS 129
E T + N+P V P V+ +ACG H+ V G + +G+
Sbjct: 257 FTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGL 316
Query: 130 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
YGQ + + P+ + G ++ ++AAG H+ +T
Sbjct: 317 YGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCIT 356
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
LP +V G ++K++ACGG H+ +T G L +G GQ G G
Sbjct: 278 LPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPT----- 332
Query: 89 TYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
++P L +G+Q+ +A G HT+ DG+++ +G N +GQ S P
Sbjct: 333 ----SLPSL---SGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRL 385
Query: 147 V-DWCVGE--VRKLAAGGGHSAVLTD 169
+ D C+ V+ ++ G HSA+L +
Sbjct: 386 LEDPCLESKLVKMVSCGARHSAILLE 411
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4088 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4144
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G G+LGLG S +P E T I N + VACG +HTL DG
Sbjct: 4145 GNGDYGRLGLG--NTSNKKLP-ERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGS 4201
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G ++K+A G S LT
Sbjct: 4202 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P++V L GI IK VACG + ALT G +Y +G
Sbjct: 4203 VWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFG 4259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + +P+L VV ++ VA G HTL G I
Sbjct: 4260 --QDRLIGL-PEGRA------RNHNRPQQVPVLAGVV---IEDVAVGAEHTLALTSTGDI 4307
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 160
+ +G G+ + + + P ++ G +RK+ AG
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + +LTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T +I I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDISI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3984 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4037
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4038 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4082
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4083 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4136
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4038 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4094
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4095 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4144
Query: 126 GYNSYGQ 132
G YG+
Sbjct: 4145 GNGDYGR 4151
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ V+ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G+LGH + + LP R+ AL + V CG ++ A+T+ G LY W
Sbjct: 629 DVYSWGSGDGGRLGHGDTSAKE---LPTRIAALADRQVTGVFCGSSYSAAITASGELYTW 685
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGK 121
G G+LG G N D Y + + + V VA CG +H+L G
Sbjct: 686 GRGTYGRLGHG----------NSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG +G+ NE P VD V K+ +G S LT
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALT 783
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + +K P+ + L I+D+ACG H+ A+TS G LY WG
Sbjct: 3136 VFSWGEGEDGKLGHGNRLTLEK---PKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3192
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV + V VACG + TL D
Sbjct: 3193 LGEYGRLGHG-------------DNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTED 3239
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + WG +G+ S P VD G V ++ G S LT A
Sbjct: 3240 GLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKA 3291
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL + VACG T LT G
Sbjct: 3187 ELYTWGLGEYGRLGH-----GDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGL 3241
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G IP++ D + GV + CG +L +
Sbjct: 3242 VFSWGDGDFGKLGRG--GSEGCSIPHQVDR--------LNGVGVMQIECGAQFSLALTKA 3291
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P+P+ G +V +A G H +TD+
Sbjct: 3292 GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDS 3343
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + S D+ P+ + +L GI + D+ACG H+ +T +G + W
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDSYDR---PKLIESLSGIGVVDIACGSAHSACITIQGHVLTW 4252
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4253 GKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4302
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P ++ G V K+ G S LT + S+
Sbjct: 4303 VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4355
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALY 61
++YTWG G+ G+LGH + S DK +P V AL + VA CG H+ +T G +
Sbjct: 681 ELYTWGRGTYGRLGHGN--SEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMR 118
AWG G+LG NES ++P+ V +P V V G ++ R
Sbjct: 738 AWGDGDFGKLG------------NES-CVGTSVPVQVDLPQASCVVKVFSGSQFSVALTR 784
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G ++ WG G+ + S ++ P V G ++ LA G H LT + L
Sbjct: 785 EGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG G G+LG CS+ P +V L+G+ + + CG + ALT G
Sbjct: 3242 VFSWGDGDFGKLGRGGSEGCSI--------PHQVDRLNGVGVMQIECGAQFSLALTKAGE 3293
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYM 117
++ WG +LG G +D + R + G ++ VA G H L
Sbjct: 3294 VWTWGKGDYYRLGHG------------TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3341
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
G+++ WG N +GQ + + PS V G V ++A G HS
Sbjct: 3342 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHS 3389
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G G+LGH + + +P+ V AL+G I D+A G H ALT+ G LY WG
Sbjct: 788 VYTWGKGHGGRLGHGN---SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P++V L +K VA GG H ALT G +++
Sbjct: 3082 LYACGEGTNGRLG---LGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFS 3138
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R P +T + ++ +ACG SH+ G++
Sbjct: 3139 WGEGEDGKLGHG--NRLTLEKPKLIET--------LRTKRIRDIACGSSHSAAITSSGEL 3188
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 3189 YTWGLGEYGR 3198
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D P V +L + IK VA GG H AL+S G +++WG + G+LG G
Sbjct: 4160 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHG-------- 4211
Query: 83 IPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D+Y R I + GV +ACG +H+ G + WG YG+ + S
Sbjct: 4212 ---NRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQ 4268
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4269 LQPKLVEALLGYRAIDIACGSGDAQTL 4295
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT G++Y W
Sbjct: 4302 NVWSWGDGDYGKLGRGG---SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTW 4358
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G + + R + G ++ +A G H + G+
Sbjct: 4359 GKGDYHRLGHG------------NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4406
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKELCEFR 180
+ WG N GQ + + P V G+ + K+ G H+ L+ ++
Sbjct: 4407 VFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS---------TYQ 4457
Query: 181 LAESVTLSNASEIE-DVASRTGSEAL-ARLC 209
L+E+V + +E D+ E L ARL
Sbjct: 4458 LSEAVRPPPSPPLEYDLVRDIAPEVLHARLV 4488
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + Q K P + L G + VA G +H A+T G +YAW
Sbjct: 3293 EVWTWGKGDYYRLGHGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAW 3349
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNG--VQLVACGHSHTLVY 116
G GQ G G +T P LV+ +G V VACG SH++ +
Sbjct: 3350 GDNDHGQQGSG-------------NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVHTCALTSKGALYAWGGCQAG 69
G+V L H + D P +V L+ ++ A C G H AL S G +Y+WG G
Sbjct: 582 GTVLYLSHAISMTEDN--YPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGG 639
Query: 70 QLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWG 126
+LG G DT + +P + V V CG S++ G+++ WG
Sbjct: 640 RLGHG-------------DTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWG 686
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG--HSAVLTDA 170
+YG+ + S + P+ V V +A G G HS +T+A
Sbjct: 687 RGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEA 733
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K LP L + +A G ++ G LYA G
Sbjct: 3030 VLVWGLNDKEQLGGLK---GSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG 3086
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG N + + +PIL V V V G H + DGK+
Sbjct: 3087 EGTNGRLGLG---------HNNNVPTPKQVPILSQYVVKKVA-VHSGGKHAMALTLDGKV 3136
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3137 FSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGEL 3188
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG G G+LG+ +S +P +V + V G + ALT +G +Y WG
Sbjct: 737 FAWGDGDFGKLGN---ESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGK 793
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGKI 122
G+LG G S +P +V G ++V A G +H L G++
Sbjct: 794 GHGGRLGHGNSEHS-------------PVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840
Query: 123 HGWGYNSYGQAANE 136
+GWG N + Q E
Sbjct: 841 YGWGRNDFQQICPE 854
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG L + + L+P+++ A +GI IK VA G HT A+T G L+ WG +
Sbjct: 1 WGRNQNGQLG---LGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR 57
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
G LGLG R+ +P + + V + + +VACG HT+ G ++ +G+
Sbjct: 58 YGNLGLG--DRNDRLVPQKVSS--------VDGDKMVMVACGWRHTISVSSLGGLYTYGW 107
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ YGQ + P ++ G+ + +++ G H+ LT
Sbjct: 108 SKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALT 149
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH + L+P R+ AL G I ++ G HT ALT+ G LY WG
Sbjct: 102 LYTYGWSKYGQLGHGDFED---RLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWG 158
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQ+G G S I + + I I +CG HTL +
Sbjct: 159 WNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQI----------SCGWRHTLAVTDKQNVFS 208
Query: 125 WGYNSYGQAANEKS 138
WG + GQ + +S
Sbjct: 209 WGRGTNGQLGHGES 222
>gi|443692774|gb|ELT94295.1| hypothetical protein CAPTEDRAFT_179088 [Capitella teleta]
Length = 394
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++T+G GS GQLGH +++S + P++V AL+G+ + V+ GG H+ AL+ G +Y WG
Sbjct: 196 VFTFGSGSRGQLGHGTIES---QTQPQKVAALEGMSMTSVSAGGWHSAALSDIGDIYTWG 252
Query: 65 GCQAGQLGLGPQTRSFSFIP-----------------------NESDTYFRNIPILVVPN 101
+ GQLG + P + + + + +P+
Sbjct: 253 WNERGQLGARSKGVKMKVEPESIESVRPAKIQKTQTGGIPSNYKDEEVNVETVNVQSIPS 312
Query: 102 GVQL------------VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ + +ACG H+ DG ++ WG N YGQ
Sbjct: 313 VLDVEDENHELLSFKDIACGSRHSAAVTDDGSLYSWGCNDYGQ 355
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ KD+ACG H+ A+T G+LY+WG GQLGLG D R+ P V
Sbjct: 324 LSFKDIACGSRHSAAVTDDGSLYSWGCNDYGQLGLG-------------DRISRDSPTKV 370
Query: 99 V--PNGVQLVACGHSHTLV 115
+ V V CG+ +T+V
Sbjct: 371 IHFSKNVIDVRCGYWNTIV 389
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
I IK V+CG HT L+ G ++ +G GQLG G ES T + + L
Sbjct: 175 ILIKSVSCGHEHTILLSKIGIVFTFGSGSRGQLGHGTI---------ESQTQPQKVAAL- 224
Query: 99 VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
G+ + V+ G H+ G I+ WG+N GQ
Sbjct: 225 --EGMSMTSVSAGGWHSAALSDIGDIYTWGWNERGQ 258
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG QLG+ G L P + L G I VACG H+ AL+ +G ++A
Sbjct: 95 EMYSWGHNGYCQLGNGGSGQG---LTPTLINTNLQGKKILRVACGSHHSMALSQEGEIFA 151
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGK 121
WG GQ+G G T P + V+ N + L +ACG + ++ + +G+
Sbjct: 152 WGQNNCGQVGSGSTTNQ----PTPRKV------VAVIGNKMALSIACGQTSSMALLENGE 201
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
++GWGYN GQ + P V G + +L G H+ L+D SL
Sbjct: 202 VYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSL 254
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK-DVACGGVHTCALTSKGALYA 62
+I+ WG + GQ+G S + + PR+VVA+ G + +ACG + AL G +Y
Sbjct: 148 EIFAWGQNNCGQVGSGSTTN---QPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG PN + + +++ QLV CG++HTL +G +
Sbjct: 205 WGYNGNGQLGLGNNVNQ----PNPCRV--QQLQGVIIS---QLV-CGYAHTLALSDEGSL 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACS 172
WG NSYGQ PS V + ++AA H A ++ A S
Sbjct: 255 FSWGANSYGQLGTGNKANQVSPSKVPMNGERMVEIAA--SHYAHISAAMS 302
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV L G+ I + CG HT AL+ +G+L++W
Sbjct: 201 EVYGWGYNGNGQLG---LGNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRD- 119
G GQLG G + S P V NG V++ A ++H M +
Sbjct: 258 GANSYGQLGTGNKANQVS-------------PSKVPMNGERMVEIAASHYAHISAAMSET 304
Query: 120 GKIHGWG 126
GK+ WG
Sbjct: 305 GKVFMWG 311
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
LD W + S+ L+ GD E + + V G +T+ +YA
Sbjct: 2 LDASKWPIFSI-------LEQGDLEKIKKICV---------FGSSGNEAIYITNDDEVYA 45
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G + LGLG SF P R + +L V + H L ++G++
Sbjct: 46 IGSNCSSCLGLGDAHSSFE--P-------RKVDVLCKKKIVDIAFGSGPHVLAVSKNGEM 96
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTD 169
+ WG+N Y Q N S P+ ++ + ++ ++A G HS L+
Sbjct: 97 YSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145
>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 609
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGI-FIKDVACGGVHTCALTSKGAL 60
+YTWG G G+LGH + SG+ ++ R+VAL G + VA G HT A+T G L
Sbjct: 173 SLYTWGFGRGGRLGHPEFHIHSGESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGEL 232
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + G+LG + +S R + + V VA + HT+V G
Sbjct: 233 FTWGSNRDGRLG---------YTAVDSQPTPRRVTSM--RQRVMAVAAANRHTVVLAEGG 281
Query: 121 KIHGWGYNSYGQAANEKSTYA--WYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG N GQ S A P V+ VG+ + +AA H+ VLT
Sbjct: 282 TVYSWGSNLQGQLGYGTSDSASNAVPRIVEAMVGKTITAVAAAKRHTVVLT 332
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+ QLG ++ +L P R+ +L G I +A H+ A+ G+LY W
Sbjct: 121 EVYSWGNGANYQLG---TEAEGLQLTPNRLDSLHGTPIVALAAAKFHSAAVAKDGSLYTW 177
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LG P+ F ES + L V VA G HT+ R G++
Sbjct: 178 GFGRGGRLG-HPE---FHIHSGESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGELF 233
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG N G+ P V V +AA H+ VL +
Sbjct: 234 TWGSNRDGRLGYTAVDSQPTPRRVTSMRQRVMAVAAANRHTVVLAE 279
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G+LG+ ++ D + PRRV ++ + VA HT L G +Y+W
Sbjct: 231 ELFTWGSNRDGRLGYTAV---DSQPTPRRVTSMRQ-RVMAVAAANRHTVVLAEGGTVYSW 286
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + + +P I +V + VA HT+V +G ++
Sbjct: 287 GSNLQGQLGYGTSDSASNAVP--------RIVEAMVGKTITAVAAAKRHTVVLTVEGDVY 338
Query: 124 GWGYN 128
WG+
Sbjct: 339 TWGHR 343
>gi|297673949|ref|XP_002815015.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Pongo
abelii]
Length = 886
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----------------------- 101
GQLG+G + + SF P + T I I+ V
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKITT-LNGIKIIQVSCGHCHSLALSKVQSNKPLSIGALK 158
Query: 102 --GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
GV ++CG HT V +DGK+ +G N GQ + P V+ G V ++
Sbjct: 159 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKKGPQLVERIDGLVSQIDC 218
Query: 160 G 160
G
Sbjct: 219 G 219
>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
Length = 925
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 2 HLDIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
H +++ WG GS G+LGH ++ G+ P+ V +L G+ +K V+CG TCALT G L
Sbjct: 273 HGEVFCWGEGSGGRLGHKVNMDMGN----PKIVESLTGVLVKSVSCGEYQTCALTHSGEL 328
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYM 117
Y WG +G +G + + +IP+ L P NG + VACG H +
Sbjct: 329 YTWGDNGSGIDLVGERRKRSQWIPSR----------LSGPLNGTSISNVACGEWHMAIVS 378
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G++ +G ++G + K P V+ G V+ A G H+A + +
Sbjct: 379 TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 432
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL--------- 54
++T+G G+ G LGH L+S + P+ V +L G+++K ACG HT A+
Sbjct: 382 QLFTYGDGTFGVLGHGKLESISQ---PKEVESLSGLWVKAAACGPWHTAAIVEVRADRLK 438
Query: 55 --TSKGALYAWGGCQAGQLGLGPQTRSF 80
T G L+ WG G+LG G Q R
Sbjct: 439 FNTKGGKLFTWGDGDKGRLGHGDQERKL 466
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
LLP+ + + + +++++ GG H +T G ++ WG G+LG ++
Sbjct: 244 LLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLG------------HKV 291
Query: 88 DTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYG--QAANEKSTYAWY 143
+ N I+ G V+ V+CG T G+++ WG N G + W
Sbjct: 292 NMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWI 351
Query: 144 PSPVDWCVG--EVRKLAAGGGHSAVLTDACSL 173
PS + + + +A G H A+++ + L
Sbjct: 352 PSRLSGPLNGTSISNVACGEWHMAIVSTSGQL 383
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 32/115 (27%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALY 61
++TWG G G+LGH GD+E LLP V L D F++ V+CG + T LT G +Y
Sbjct: 446 LFTWGDGDKGRLGH-----GDQERKLLPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGTVY 499
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 113
G+LG DT RN P +V V+ +ACG T
Sbjct: 500 T-----MGRLG---------------DTEDRNSPAVVEELRYRQVESIACGSGFT 534
>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
Length = 265
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++T G G GQLGH + + PRRV L GI + VA G HT +T GALYAW
Sbjct: 105 DVFTVGWGLYGQLGH---EDAEDLFAPRRVEHLAGITVVSVAAGSAHTACVTRDGALYAW 161
Query: 64 GGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR--- 118
G + G+LG G T++ ES+ ++ + VACG SHT+ R
Sbjct: 162 GSNRKGELGTATGDVTKA-----RESNDGAGSLAV--------AVACGSSHTVALARLES 208
Query: 119 -DGKIHGWGYNSYGQAA----NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
+ + G+G+N+ GQ ++ A P P + G+V KL G H+ V
Sbjct: 209 GEAGLFGFGWNNMGQLGLGDDKDRGIPARIPLPAN-EKGKVTKLRCGWWHTVV 260
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
I + VA G H+ AL++KG ++AWG GQLGLG + +P S R++ I+
Sbjct: 32 IDVVAVAAGERHSLALSAKGTVFAWGDNHTGQLGLGGEDPLPMDVPTTS--LGRDVVIVG 89
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
VA G H+++ G + G+ YGQ +E + + P V+ G V +
Sbjct: 90 -------VAAGARHSVMVSATGDVFTVGWGLYGQLGHEDAEDLFAPRRVEHLAGITVVSV 142
Query: 158 AAGGGHSAVLTDACSLKELCEFRLAESVT----LSNASEIEDVASRTGSEALARLC 209
AAG H+A +T +L R E T ++ A E D A GS A+A C
Sbjct: 143 AAGSAHTACVTRDGALYAWGSNRKGELGTATGDVTKARESNDGA---GSLAVAVAC 195
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T+G G GQ+G S + EL P V L G+ I +A G HT +T+ G +Y++G
Sbjct: 285 VLTFGWGLYGQIGQGSTE---DELSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFG 341
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G Q GQLG+G S P D + V VACG H++V GKI
Sbjct: 342 GNQFGQLGVGGNNAELS--PRLIDAPLLGDELSVA------VACGARHSVVLTGSGKIFA 393
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 394 WGWNKYGQ 401
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 17 GHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHTCAL--------TSKGALYAWGGCQ 67
G S + P +V LD GI I VA GG HT AL T G ++ WG
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGG 225
Query: 68 AGQLGLGPQTRSFSF---IP--NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLGLG R SF IP N +DT + + + ++ +ACG H+ V G +
Sbjct: 226 EGQLGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAV 285
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+G+ YGQ + PS V G + +AAG H+ +T+
Sbjct: 286 LTFGWGLYGQIGQGSTEDELSPSHVSTLQGLSIVGIAAGLWHTLCITN 333
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD-----VACGGVHTCALTSKG 58
D+Y++G GQLG + + EL PR + D + D VACG H+ LT G
Sbjct: 336 DVYSFGGNQFGQLG---VGGNNAELSPRLI---DAPLLGDELSVAVACGARHSVVLTGSG 389
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLV 115
++AWG + GQLGLG D R++P+ V N +ACG HTL
Sbjct: 390 KIFAWGWNKYGQLGLG-------------DCNNRDLPMQVTMNDGGRAASIACGWWHTLA 436
Query: 116 YMR 118
+R
Sbjct: 437 SVR 439
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y++G GS GQLG +GD + +++ L K ++ G H+ ALT+ G LY W
Sbjct: 109 LYSFGAGSDGQLG-----TGDAQCATSPQLINLPEQKYKLLSAGTDHSAALTTDGTLYMW 163
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG T S P E L + V V+CG+ HT + DGK++
Sbjct: 164 GSGSEGQLGLG-NTDSVE-TPKE----------LKFHSSVSWVSCGYYHTAIVTDDGKLY 211
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+G +G+ ++ P V+ +++ +A GG H+AV++D +L
Sbjct: 212 TFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNL 263
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG H+ +T G LY +G GQLGLG P +++ GV
Sbjct: 41 ISCGDEHSAIITESGRLYTFGSNDWGQLGLG------HMKPTTKPGCVKSLK----QEGV 90
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
LVACG SHT+V + G+++ +G S GQ + A P ++ + + L+AG H
Sbjct: 91 NLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINLPEQKYKLLSAGTDH 150
Query: 164 SAVLT 168
SA LT
Sbjct: 151 SAALT 155
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GS GQLG L + D P+ + + V+CG HT +T G LY +G
Sbjct: 160 LYMWGSGSEGQLG---LGNTDSVETPKELKFHSSVSW--VSCGYYHTAIVTDDGKLYTFG 214
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LGL + P ++ + ++LVACG +HT V G ++
Sbjct: 215 EKEFGKLGLTEDQLEDTTTPKHVES---------ITEKIKLVACGGAHTAVISDVGNLYT 265
Query: 125 WGYNSYGQAANEKSTYAW-YPSPV-DWCVGEVRKLAAGGGHSAVLTDACSL 173
+G +GQ N S P V + + ++ G H+AV+T+ ++
Sbjct: 266 FGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAM 316
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG Q D P+ V ++ IK VACGG HT ++ G LY +G
Sbjct: 210 LYTFGEKEFGKLGLTEDQLEDT-TTPKHVESITEK-IKLVACGGAHTAVISDVGNLYTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG GP S +P + + + + V+CG +HT V G ++
Sbjct: 268 DGMHGQLGNGPSLLQLS-LPQKV--------ARLSEHKCKYVSCGDNHTAVITEKGAMYT 318
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 319 FGDGRHGK 326
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G GQLG+ S + LP++V L K V+CG HT +T KGA+Y +
Sbjct: 262 NLYTFGDGMHGQLGNGP--SLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIP 84
G + G+LG+ + F P
Sbjct: 320 GDGRHGKLGISEEDFCNIFKP 340
>gi|301121474|ref|XP_002908464.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262103495|gb|EEY61547.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 527
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 4 DIYTWGLGSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
D+++WG+G G LGH Q+ D + P V+AL G + +ACG HT AL G L
Sbjct: 176 DVFSWGIGRSGALGHGLNVHEQTFDTVMSPMEVLALKGRRVVQIACGDSHTAALLQSGQL 235
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI--PILVVPNGVQ--LVACGHSHTLVY 116
GQ G G R + P+ D + + P++ GV+ VACG +HTLV
Sbjct: 236 LT-----CGQRGYGRLGRQIANTPDVLDDEYSSWFGPVVFAKEGVKCTYVACGAAHTLVV 290
Query: 117 MRDGKIHGWGYNSYGQ 132
++ +G+NS GQ
Sbjct: 291 AGAHVLYAFGWNSSGQ 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 33 VVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGP-QTRSFSFIPNESDTYF 91
V A +G+ VACG HT + LYA+G +GQLG+G + R +P YF
Sbjct: 269 VFAKEGVKCTYVACGAAHTLVVAGAHVLYAFGWNSSGQLGVGDCRDR---LVPTRV-AYF 324
Query: 92 RNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA-NEKSTYAWYPSPVDWC 150
+ L P + VA G H+LV DGK+ WG + GQ N P V
Sbjct: 325 DAVDTL-SPLAIASVAAGKQHSLVSCPDGKLFAWGNDEMGQCGLNSCPQIYTLPHLVRSL 383
Query: 151 VG-EVRKLAAGGGHSAVLTDAC-----SLKELCEFRLAESVTLSNASEIEDVASRTGSEA 204
+G V +LAAG HSAVLT +L+ + A+ V +S +D R
Sbjct: 384 IGLRVTQLAAGEAHSAVLTSHSQQHLETLERTQPIQYAQLVDFYESSIKDDTERRAQVFE 443
Query: 205 LARLCE 210
AR C+
Sbjct: 444 RARRCQ 449
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR V L I VACG H+ AL G +++WG ++G LG G +F DT
Sbjct: 147 PRVVQPLLHKRIVQVACGASHSFALAEDGDVFSWGIGRSGALGHGLNVHEQTF-----DT 201
Query: 90 YFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYG----QAANEKST----Y 140
+ +L + V +ACG SHT ++ G++ G YG Q AN Y
Sbjct: 202 VMSPMEVLALKGRRVVQIACGDSHTAALLQSGQLLTCGQRGYGRLGRQIANTPDVLDDEY 261
Query: 141 AWYPSPVDWCVGEVR--KLAAGGGHSAVLTDA 170
+ + PV + V+ +A G H+ V+ A
Sbjct: 262 SSWFGPVVFAKEGVKCTYVACGAAHTLVVAGA 293
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 36/168 (21%)
Query: 19 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG---GCQAGQLGLGP 75
CS G +L R + DVACG H + +G L WG C++
Sbjct: 91 CSKDGGTDVVLSR--------MLLDVACGDKHGVGASEQGYLLTWGEVFDCRS------- 135
Query: 76 QTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+TRS E +T N P +V P + VACG SH+ DG + WG G
Sbjct: 136 KTRS------EKETA--NAPRVVQPLLHKRIVQVACGASHSFALAEDGDVFSWGIGRSGA 187
Query: 133 AAN----EKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAVLTDACSL 173
+ + T+ SP++ + R+ +A G H+A L + L
Sbjct: 188 LGHGLNVHEQTFDTVMSPMEVLALKGRRVVQIACGDSHTAALLQSGQL 235
>gi|326492157|dbj|BAJ98303.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1391
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
Query: 6 YTWGLGSVGQLGHCSLQSG----DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
Y+WG G+ G+LGH S++ G E++P+R+ L+ I ++CG HTCALT+KG +
Sbjct: 296 YSWGDGTDGRLGH-SIEKGFHMSKFEIVPKRITTLEKYRILLMSCGNSHTCALTNKGEIL 354
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--------VQLVACGHSHT 113
WG + + + +F N YF ++V P G V CG +H
Sbjct: 355 TWGKASSNK-------KEETFAGNYKLLYFAPRKLIVSPTGDGNTTEPVFIKVVCGPTHN 407
Query: 114 LVYMRDGKIHGWG 126
+D K++ WG
Sbjct: 408 AAIDKDFKLYTWG 420
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLG----LGPQTRSFSFIP 84
+P + I I +ACG H+ A S+G Y+WG G+LG G F +P
Sbjct: 264 IPINIGFFQKIKIMGIACGKGHSMAWDSEGYAYSWGDGTDGRLGHSIEKGFHMSKFEIVP 323
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNS 129
T IL L++CG+SHT G+I WG S
Sbjct: 324 KRITT-LEKYRIL-------LMSCGNSHTCALTNKGEILTWGKAS 360
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--- 100
V CG + G LY+ G G+LGLG D + IP L+
Sbjct: 96 VKCGLRYAIFQDDNGKLYSCGYGNLGELGLG------------KDKIYTKIPTLIEGLDY 143
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
V +CG +H + D +I WG +YG+ T + P
Sbjct: 144 KKVSKYSCGPNHVVALSTDHRIFSWGDGNYGKQGTSGVTAVFRP 187
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
DVACGG + +G +A G G+LG+G S N +F+ I I+ +
Sbjct: 226 DVACGGDFSIFAGEQGT-FALGRETNGRLGVGAMFEPASIPINIG--FFQKIKIMGI--- 279
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
ACG H++ + +G + WG + G+
Sbjct: 280 ----ACGKGHSMAWDSEGYAYSWGDGTDGR 305
>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
Length = 1023
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 2 HLDIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
H +++ WG GS G+LGH ++ G+ P+ V +L G+ +K V+CG TCALT G L
Sbjct: 325 HGEVFCWGEGSGGRLGHKVNMDMGN----PKIVESLTGVLVKSVSCGEYQTCALTHSGEL 380
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYM 117
Y WG +G +G + + +IP+ L P NG + VACG H +
Sbjct: 381 YTWGDNGSGIDLVGERRKRSQWIPSR----------LSGPLNGTSISNVACGEWHMAIVS 430
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G++ +G ++G + K P V+ G V+ A G H+A + +
Sbjct: 431 TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 484
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL--------- 54
++T+G G+ G LGH L+S + P+ V +L G+++K ACG HT A+
Sbjct: 434 QLFTYGDGTFGVLGHGKLESISQ---PKEVESLSGLWVKAAACGPWHTAAIVEVRADRLK 490
Query: 55 --TSKGALYAWGGCQAGQLGLGPQTRSF 80
T G L+ WG G+LG G Q R
Sbjct: 491 FNTKGGKLFTWGDGDKGRLGHGDQERKL 518
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
LLP+ + + + +++++ GG H +T G ++ WG G+LG ++
Sbjct: 296 LLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLG------------HKV 343
Query: 88 DTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYG--QAANEKSTYAWY 143
+ N I+ G V+ V+CG T G+++ WG N G + W
Sbjct: 344 NMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWI 403
Query: 144 PSPVDWCVG--EVRKLAAGGGHSAVLTDACSL 173
PS + + + +A G H A+++ + L
Sbjct: 404 PSRLSGPLNGTSISNVACGEWHMAIVSTSGQL 435
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 32/115 (27%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALY 61
++TWG G G+LGH GD+E LLP V L D F++ V+CG + T LT G +Y
Sbjct: 498 LFTWGDGDKGRLGH-----GDQERKLLPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGTVY 551
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 113
G+LG DT RN P +V V+ +ACG T
Sbjct: 552 T-----MGRLG---------------DTEDRNSPAVVEELRYRQVESIACGSGFT 586
>gi|299116914|emb|CBN75024.1| Regulator of chromosome condensation, RCC1; Ankyrin ubiquitin
interaction motif, zinc finger protein [Ectocarpus
siliculosus]
Length = 1310
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG G G+LGH G++E +LP V L + DV+ HT ALT +G LY
Sbjct: 222 LFTWGHGKSGRLGH-----GNEEVCMLPTPVDGLAHQAVTDVSVAETHTAALTREGELYT 276
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + GQLG G S F P + R + ++ VA G HT V G
Sbjct: 277 WGRDRFGQLGHGSAGSSGRFAPKRVEG-LRKVTVVA-------VAAGTEHTAVATSSGHC 328
Query: 123 HGWGYNSYGQ 132
+ +G N++GQ
Sbjct: 329 YTFGRNNHGQ 338
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++++G LG+ S D + PRRV +L + + VA H+ A+T G L+ W
Sbjct: 168 DVFSFGKADF-TLGYDSFGRADI-IPPRRVESLANLHVTRVAASKHHSAAVTVCGKLFTW 225
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G ++G+LG G +P D + V V+ +HT R+G+++
Sbjct: 226 GHGKSGRLGHG--NEEVCMLPTPVDG--------LAHQAVTDVSVAETHTAALTREGELY 275
Query: 124 GWGYNSYGQA--ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG + +GQ + S+ + P V+ V +AAG H+AV T +
Sbjct: 276 TWGRDRFGQLGHGSAGSSGRFAPKRVEGLRKVTVVAVAAGTEHTAVATSS 325
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G+ I D+ACGG H+ A+TS G LY WG
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDR---PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG 4107
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH--SHTLVYMRDGK 121
+ G+LG G +SD R + + + V VACG + TL D
Sbjct: 4108 KGRYGRLGHG-----------DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 4156
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P +D G V K+ G S LT
Sbjct: 4157 VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALT 4204
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK P+ + L I+D+ACG H+ A+ S G LY WG
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDK---PKLIETLKSKRIRDIACGSGHSAAIASNGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V + V VACG + T+ D
Sbjct: 3126 LGEYGRLGHG-------------DTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTD 3172
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P V+ G V ++ G S LT
Sbjct: 3173 GCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALT 3222
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD + P+ V L G + VACG T ALT+ G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGC 3174
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y+WG G+LG G ++ + E GV V CG +L +
Sbjct: 3175 VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGL----------GVVQVECGAQFSLALTKY 3224
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P+ V+ G ++ +A G H +TD
Sbjct: 3225 GEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDT 3276
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S D+ P+ + AL I +ACG ++ AL+ G LY WG
Sbjct: 530 VYSWGNGDGGRLGHGDTVSYDE---PKLIEALLEKNIVFIACGSTYSAALSVSGELYTWG 586
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
G+LG G N D + + + V VACG S TL G +
Sbjct: 587 RGNYGRLGHG----------NFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIV 636
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG YG+ + + P VD + V K+ G SA LT
Sbjct: 637 FSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALT 683
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D ++P V L G + VACG T +T+ G ++
Sbjct: 581 ELYTWGRGNYGRLGHGNF---DDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 637
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D +I ++ V G Q A +H G+
Sbjct: 638 SWGDGDYGKLGRGGTDGSKT--PKIVDKLL-DINVVKVFCGSQFSAALTAH-------GE 687
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +++ L+ G H VLT+
Sbjct: 688 VYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTE 736
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L I + V CG + ALT+ G +Y WG
Sbjct: 636 VFSWGDGDYGKLGR---GGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWG 692
Query: 65 GCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+LG G + R I + D +++ + G +H LV D +
Sbjct: 693 KGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSV------------GATHILVLTEDQFV 740
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 741 YGWGRNDYGQ 750
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P V L+G+ + V CG + ALT G ++ WG
Sbjct: 3175 VYSWGDGDFGKLGR---GGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWG 3231
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 3232 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACSL--KELC 177
+ WG N +GQ N ++ PS V + V +++ G HS VL D S +E
Sbjct: 3280 YAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAWVLVDQPSSGNQEPV 3339
Query: 178 EFRLAES------VTLSNASEIEDVASRTGSEALAR 207
F A + L+NA E + + T + R
Sbjct: 3340 TFPTARDPLGQMCLGLTNAPEQNGIVATTSNVVATR 3375
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PR+V AL G I +A G +H A + KG ++ WG
Sbjct: 4209 VYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 4265
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T + P LV + VACG +HTL +
Sbjct: 4266 DNDEGQLGDG-------------TTSALHRPRLVHALQGKKITRVACGSAHTLAW 4307
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y+ G G+ G+LG + D ++P + ++ +FIK VA GG H AL+S+G +Y+
Sbjct: 3997 VYSTGYGAAGRLG---IGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYS 4053
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG G+LG G + +Y R P L+ GV++ +ACG H+
Sbjct: 4054 WGEGDDGKLGHGNKM-----------SYDR--PKLIEDLLGVEIIDIACGGHHSAAITSA 4100
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4101 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTL 4149
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P+ + L IK VA GG H ALT G +++
Sbjct: 3015 LYACGEGTNGRLG---LGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3071
Query: 63 WGGCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG G I R+I ACG H+ +G
Sbjct: 3072 WGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDI------------ACGSGHSAAIASNG 3119
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS---AVLTDAC 171
+++ WG YG+ + + P V VG V ++A G + A+ TD C
Sbjct: 3120 ELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGC 3174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4156 NVWSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTW 4212
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4213 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4260
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4261 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHT 4304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL QLG G K LP L + +A G ++ +G LYA G
Sbjct: 2963 VYVWGLNDKDQLGGLK---GSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3019
Query: 65 GCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG IP S + + V G H L +DGK+
Sbjct: 3020 EGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVA----------VHSGGKHALALTQDGKV 3069
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + + P ++ + +R +A G GHSA +
Sbjct: 3070 FSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAI 3115
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + +A G A+T+ G +Y+ G
Sbjct: 3945 IYGWGHNHRGQLGGLE---GPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTG 4001
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AG+LG+G T S IP T +I + + V+ G H L +G ++
Sbjct: 4002 YGAAGRLGIG-GTDSV-MIP----TLLESIQHVFIKKVA--VSSGGKHCLALSSEGHVYS 4053
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4054 WGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSA 4100
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G I VA G +H A+T G +YAW
Sbjct: 3226 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3282
Query: 64 GGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G + R S + D V V+CG SH++ ++
Sbjct: 3283 GDNDHGQQGNGTTSVNRKPSLVHELEDAR------------VNRVSCGSSHSIAWV 3326
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV + +A G H ALT G +Y+WG G+LG G
Sbjct: 492 GSETQYPQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHG------- 544
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
DT + P L+ + + +ACG +++ G+++ WG +YG+ +
Sbjct: 545 ------DTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNF 598
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 599 DDVMIPTLVTTLKGHTVVHVACGSGDSQTL 628
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++YTWG G +LGH S + P+ + +L IKD++ G H LT +Y
Sbjct: 685 HGEVYTWGKGDTYRLGH---GSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVY 741
Query: 62 AWGGCQAGQL 71
WG GQ+
Sbjct: 742 GWGRNDYGQI 751
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4260 EVFTWGDNDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHT---------LAW 4307
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILV 98
+A Q + T + + + S + RN +L+
Sbjct: 4308 STAKATQSRMPASTPMEYDLVKDLSYSVLRNRLVLL 4343
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+I+ WG S GQ+G + S + LPR+V L F++ V CG T ALT G ++A
Sbjct: 148 EIFAWGRNSCGQVG---IGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTDGGEVFA 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG G N S+ + + I + ++ +ACG +H+L +G++
Sbjct: 205 WGFNGNGQLGAG----------NLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDEGQL 254
Query: 123 HGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAA 159
WG N+ GQ AN + P V +G + ++AA
Sbjct: 255 FAWGSNTCGQLCANLPRSNQTSPVLVASALGRIIEVAA 292
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG + GQLG S G + P V L G + +ACG H+ A+T +G ++A
Sbjct: 95 EVFSWGHNAFGQLGLGSTTVG---IAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFA 151
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ+G+G N + R + ++ V+ V CG + T+ G++
Sbjct: 152 WGRNSCGQVGIG---------SNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTDGGEV 202
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG----EVRKLAAGGGHSAVLTD 169
WG+N GQ + P+ V +G + ++A G HS LTD
Sbjct: 203 FAWGFNGNGQLGAGNLSNQHSPALV---IGLHNVVIEQIACGFAHSLALTD 250
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG +L + P V+ L + I+ +ACG H+ ALT +G L+AW
Sbjct: 201 EVFAWGFNGNGQLGAGNLSNQHS---PALVIGLHNVVIEQIACGFAHSLALTDEGQLFAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH----TLVYMRD 119
G GQL +P + T P+LV +++ H T+ +
Sbjct: 258 GSNTCGQLCAN--------LPRSNQTS----PVLVASALGRIIEVAAVHACNITVAVNQS 305
Query: 120 GKIHGWGYNSYGQAAN---------EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
GK++ WG GQ A +A + SP C R + G + + DA
Sbjct: 306 GKVYMWG-QVRGQTATCPIETHFGCVDDAFACFASPPVAC----RPIQFEAGRRSTILDA 360
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
++Y G S LG Q L P R+ L G I +A G G H AL+ G +++
Sbjct: 42 ELYAIGTNSCSCLGTNRSQG---TLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFS 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMR 118
WG GQLGLG T + P LV + V +ACG H++
Sbjct: 99 WGHNAFGQLGLGSTTVGIA-------------PSLVGDTLSGHNVVQIACGSHHSVAVTD 145
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
G+I WG NS GQ + P V + VR + G + LTD
Sbjct: 146 RGEIFAWGRNSCGQVGIGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTD 198
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+ WG S GQLG L L P ++ +++G ++ ++CG H+ LTS G +Y +G
Sbjct: 140 IFAWGKNSFGQLG---LGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFG 196
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY-MRDG 120
+GQLG NE + F IP +VV V +ACG HTL + M+
Sbjct: 197 CGSSGQLG-----------HNEFEDQF--IPKMVVDLMGTPVTQIACGRKHTLAHVMKGN 243
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
K++ +G N GQ A P W
Sbjct: 244 KLYSFGLNVKGQLGIGSYEKARIPMLTTW 272
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+ +Y+WG + QLG +LQ D+ P ++ I+ + CG HT L S
Sbjct: 1 MSMYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFL-SG 59
Query: 58 GALYAWGGCQAGQLGLG------PQTRSFSFIPNE--------------SDTYFR---NI 94
G +YA G G+LG+ P FS+ NE S R N
Sbjct: 60 GLVYASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNC 119
Query: 95 PILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE- 153
PI +Q+ A GH H+L G I WG NS+GQ +P+ + G+
Sbjct: 120 PI------IQICAGGH-HSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKH 172
Query: 154 VRKLAAGGGHSAVLTDA 170
VR ++ G HS +LT A
Sbjct: 173 VRYISCGEEHSVLLTSA 189
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQ+G S K + P+ V L I + GG H+ ALT G ++AWG
Sbjct: 87 VFSWGSNEFGQVGINS--KFHKYVSPQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWG 144
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKI 122
GQLGLG Q P + + NG V+ ++CG H+++ G++
Sbjct: 145 KNSFGQLGLGDQQD--RLFPTKIQSM----------NGKHVRYISCGEEHSVLLTSAGRV 192
Query: 123 HGWGYNSYGQAANEKSTYAWYPS-PVDWCVGEVRKLAAGGGHS 164
+ +G S GQ + + + P VD V ++A G H+
Sbjct: 193 YTFGCGSSGQLGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHT 235
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG L S ++E P+ + +L + + CG H ALT G L++W
Sbjct: 113 EVFSWGRNDKGQLGRGKL-SKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSW 171
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGLG + SF P + R IPI +A G +H+ + +
Sbjct: 172 GCNKYGQLGLG-SSHSFHDTPQQI-VCLRGIPI-------AQIASGGNHSFILTWSRAVF 222
Query: 124 GWGYNSYGQ 132
GWG NS+GQ
Sbjct: 223 GWGKNSFGQ 231
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG S S P+++V L GI I +A GG H+ LT A++ WG
Sbjct: 168 LFSWGCNKYGQLGLGSSHSFHDT--PQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWG 225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGK 121
GQLGL +D Y ++ P L + V ++CG HT+ ++G
Sbjct: 226 KNSFGQLGL-------------NDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGG 272
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDA 170
+ +G +GQ + + P V +G V ++A G H+ + +
Sbjct: 273 VFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPS 322
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 55/216 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQL L P+ V L + IK+++CG HT +T G LY+ G
Sbjct: 4 VFGWGRSNDGQLS-IGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCG 62
Query: 65 GCQAGQLGLG-PQTRS-------------------------FSFIPNESDTYF---RN-- 93
+ G+LG P++R+ FS + + F RN
Sbjct: 63 SNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDK 122
Query: 94 ------------------IPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
+ L V VQ + CG +H L DG++ WG N YGQ
Sbjct: 123 GQLGRGKLSKEEERKPKLMKSLAVCTVVQ-ITCGANHCLALTDDGRLFSWGCNKYGQLG- 180
Query: 136 EKSTYAWYPSPVDW-CVG--EVRKLAAGGGHSAVLT 168
S+++++ +P C+ + ++A+GG HS +LT
Sbjct: 181 LGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILT 216
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++++G G GQLGH S Q+ E+LP+RV+ L G I VACG HT A + S G +YA+
Sbjct: 273 VFSFGAGGFGQLGHNSTQN---EILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q P V LD + + D+A GG H+ ALT++G +Y WG
Sbjct: 217 LWAWGNNEYGQLGTGDTQP---RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN--------LLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 76/209 (36%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E P V +L + I A GG H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPP--ETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQ-------TRSFSFIPNE------------------------------- 86
G + GQ G P R IP
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D ++P+ V V+L+A G H L DG + WG N YGQ +
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPR 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
YP PV + +AAGG HS LT+
Sbjct: 237 SYPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG L + +++ L V AL+ ++ V G ++ A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ S P+ + N+ I+ A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTES-TPSLVKS-LANVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E S P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K +LP++V L G I V+CGG H+ ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---------------VAC 108
G G+LG G + + + +PI + P + VAC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIHIPPPEGRFNHTDEEDDGKWIAKHVAC 377
Query: 109 GHSHTLVYM 117
G HTL +
Sbjct: 378 GGRHTLAIV 386
>gi|124359876|gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
Length = 444
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G LGH +EL PR V IK +A G HT A+T G LY W
Sbjct: 170 EVFTWGYGGFGALGHSVYT---RELFPRLVKGAWEGTIKHIATSGAHTAAVTESGDLYIW 226
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G + G +IP V +P V V+CG TL +G+
Sbjct: 227 GREE------GEGRLGLGPGRGPDHAGGLSIPCKVKELPFPVAAVSCGGFFTLALTEEGQ 280
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
+ WG NS + W P PV + +VR ++A+GG HS LTD
Sbjct: 281 LWNWGANSNYELGRGDRIGGWRPRPVP-SLEKVRVIQIASGGYHSLALTD 329
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG H+C L G L+ WG G+LGLG + S F+P + + N V
Sbjct: 106 ISCGLFHSC-LVVDGGLWVWGKGDGGRLGLGHE--SSMFVPT-LNPHLEN---------V 152
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAAGG 161
+ VA G H++ G++ WGY +G + T +P V W G ++ +A G
Sbjct: 153 KSVALGGLHSVALTSAGEVFTWGYGGFGALGHSVYTRELFPRLVKGAW-EGTIKHIATSG 211
Query: 162 GHSAVLTDACSL 173
H+A +T++ L
Sbjct: 212 AHTAAVTESGDL 223
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ V+CGG T ALT +G L+ WG +LG G + + P S R I I
Sbjct: 262 VAAVSCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQI---- 317
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 159
A G H+L DGK+ WG+ GQ + P+ V+ E + ++
Sbjct: 318 ------ASGGYHSLALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHEHIIYISC 371
Query: 160 GGGHSAVLTDACSL 173
GG SA +TD L
Sbjct: 372 GGASSAAVTDEGKL 385
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N +GQ + YPS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNEFGQLGLG-------------HTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 4 DIYTWGLG----SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
DIYTWG G + GQLG ++ + +P ++ + V+CG HT AL
Sbjct: 215 DIYTWGGGGQFQNKGQLGLGHMKDIE---IPEQIQFFKNKKVIKVSCGQFHTMALIDDNQ 271
Query: 60 LYAWGGCQAGQLGLGP---------QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
LY WG + G+LG G +I + Y++ P + + CG
Sbjct: 272 LYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDP------QISDIKCGG 325
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLT 168
HTL+ + G ++ GY SYGQ K+T + W + ++ K+AAG HS VLT
Sbjct: 326 HHTLILLNIGYVYSTGYGSYGQLG-LKTTNNHCEFQLVWTLTKKKIIKIAAGWNHSLVLT 384
Query: 169 DA 170
D
Sbjct: 385 DT 386
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 43/171 (25%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y G G+LG +L + + + AL GI + VACG HT ALT +YAW
Sbjct: 113 DLYVCGSALHGKLGLENLTMANINKF-QILTALKGIKVLQVACGDYHTLALTENDQVYAW 171
Query: 64 GGC---QAGQLGLGP------QTRSFSF----------IPNESDTY-------FRN---- 93
GG + GQ G P + ++ I N+ D Y F+N
Sbjct: 172 GGTLYKKVGQRGGKPGPIHQLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQL 231
Query: 94 ----IPILVVPNGVQL--------VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ + +P +Q V+CG HT+ + D +++GWG G+
Sbjct: 232 GLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGELGE 282
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WG G+L S ++ P L+ I+IK ++ H+ ++S G LY
Sbjct: 60 VYAWGKNEYGEL---SFSQTKQQFYSKPENPKNLEKIYIKQISTSQNHSSCVSSNGDLYV 116
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 120
G G+LGL N + IL G+++ VACG HTL +
Sbjct: 117 CGSALHGKLGL----------ENLTMANINKFQILTALKGIKVLQVACGDYHTLALTEND 166
Query: 121 KIHGWG---YNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+++ WG Y GQ + P P+ + V + G HS +T+
Sbjct: 167 QVYAWGGTLYKKVGQRGGK-------PGPIHQLTNKGVTYIDCGDFHSVAITN 212
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF----------IKDVACGGVHTCAL 54
+Y WG G +G+LG + L+ + I I D+ CGG HT L
Sbjct: 272 LYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGGHHTLIL 331
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
+ G +Y+ G GQLGL F + + + +A G +H+L
Sbjct: 332 LNIGYVYSTGYGSYGQLGLKTTNNHCEF----------QLVWTLTKKKIIKIAAGWNHSL 381
Query: 115 VYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
V + GYN++GQ ++ + + V +++AGG HS + +
Sbjct: 382 VLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVVEISAGGSHSWAILEQQFP 441
Query: 174 KELCEFRLAESVTLSNASEIEDVASRTGSEALARL 208
++ +R + + ++I SR S + L
Sbjct: 442 EKPGNYRYPSPLRQIDQNQIIQGKSRYTSPDTSAL 476
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI-KDVACGGVHTCALTSKGALYAWGGC 66
WG + GQLG + + P V L G+ + +A G HT A+ G ++AWG
Sbjct: 481 WGFNAYGQLGDGT---SSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLN 537
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T R IP+ + P GV +A G +HTL +DG +
Sbjct: 538 ASGQLGDGA-------------TIDRRIPVQI-PGLAGVTAIAAGSAHTLAAGQDGAVWS 583
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NSYGQ + +T+ P V G V +AAG HS L
Sbjct: 584 WGANSYGQLGDGTTTHRLSPVQVPGLTG-VSAMAAGDAHSVAL 625
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + L P +V L G+ +A G HT A+ G ++AWG
Sbjct: 378 VWAWGDNVWGQLGDGTYT---DRLTPVQVPGLTGV--TAIAAGESHTVAMRQDGTVWAWG 432
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G TY + + VP+ V +A G HTL +DG +
Sbjct: 433 DNVWGQLGDG--------------TYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTV 478
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
WG+N+YGQ + S+ + PSPV
Sbjct: 479 CAWGFNAYGQLGDGTSSRS--PSPV 501
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG +GQLG + + L P +V L + +A G HT A+ G ++AWG
Sbjct: 681 VWAWGYNDLGQLGDGTTT---RRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWG 735
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R+ P+ V GV +A G++HT+ +DG +
Sbjct: 736 YNLWGQLGDGSSTA-------------RSTPVQVQELTGVSALAAGYAHTVAVKQDGTVW 782
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS Q N ST + P V+ G V L AG H+A ++
Sbjct: 783 AWGNNSGTQLGNGSSTDRYTPVWVEGLTG-VSALTAGRFHTAAVS 826
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + L P +V L G+ +A G H+ AL G + AWG
Sbjct: 581 VWSWGANSYGQLGDGTTT---HRLSPVQVPGLTGV--SAMAAGDAHSVALLQDGTVSAWG 635
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R P+ V GV VA G HT+ +DG +
Sbjct: 636 RNSWGQLG-------------DGTTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTVW 682
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN GQ + +T P V + +V +AAG H+ +
Sbjct: 683 AWGYNDLGQLGDGTTTRRLAPVQVQ-GLTDVTAIAAGYFHTVAV 725
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + L P +V L G+ +A G HT A+ G ++AWG
Sbjct: 178 VWAWGDNAWGQLGDGTRT---NRLTPVQVPGLTGV--TAIAAGDYHTLAVRQDGTVWAWG 232
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + + +P L GV ++ G SHT+ +DG +
Sbjct: 233 NNALGQLGDGTYTERLTPV---------QVPGL---TGVTAISAGESHTVAVRQDGTVWA 280
Query: 125 WGYNSYGQAANEKST 139
WG N +GQ + T
Sbjct: 281 WGDNVWGQLGDGTRT 295
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL GQLG + + P +V L G+ +A G HT A++ G ++AWG
Sbjct: 78 VWAWGLNVWGQLGDGTHT---ERHTPVQVPGLTGV--TAIAAGRRHTFAVSQDGTVWAWG 132
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TR+ P + +P L GV +A G HT +DG +
Sbjct: 133 DNDWGQLGDG--TRADRHTPVQ-------LPEL---TGVTAIAAGRRHTFAVRQDGTVWA 180
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC-------SLKEL 176
WG N++GQ + T P V G V +AAG H+ AV D +L +L
Sbjct: 181 WGDNAWGQLGDGTRTNRLTPVQVPGLTG-VTAIAAGDYHTLAVRQDGTVWAWGNNALGQL 239
Query: 177 CEFRLAESVTLSNASEIEDVASRTGSEA 204
+ E +T + V + + E+
Sbjct: 240 GDGTYTERLTPVQVPGLTGVTAISAGES 267
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG ++GQLG + + L P +V L G+ ++ G HT A+ G ++AWG
Sbjct: 228 VWAWGNNALGQLGDGTYT---ERLTPVQVPGLTGV--TAISAGESHTVAVRQDGTVWAWG 282
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TR+ P + +P L +GV +A G HT +DG +
Sbjct: 283 DNVWGQLGDG--TRTDRLTPVQ-------VPGL---SGVTAIAEGRRHTFAVRQDGTVWA 330
Query: 125 WGYNSYGQ 132
WG N +GQ
Sbjct: 331 WGLNFWGQ 338
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + L P +V L G+ +A G HT A+ G ++AWG
Sbjct: 278 VWAWGDNVWGQLGDGTRT---DRLTPVQVPGLSGV--TAIAEGRRHTFAVRQDGTVWAWG 332
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TRS P + +P L V +A G HTL +DG +
Sbjct: 333 LNFWGQLGDG--TRSDRLTPVQ-------VPDL---TSVTAIAAGDYHTLAVRQDGTVWA 380
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N +GQ + T P V G V +AAG H+ +
Sbjct: 381 WGDNVWGQLGDGTYTDRLTPVQVPGLTG-VTAIAAGESHTVAM 422
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + D+ P ++ L G+ +A G HT A+ G ++AWG
Sbjct: 128 VWAWGDNDWGQLGDGT--RADRHT-PVQLPELTGV--TAIAAGRRHTFAVRQDGTVWAWG 182
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TR+ P + +P L GV +A G HTL +DG +
Sbjct: 183 DNAWGQLGDG--TRTNRLTPVQ-------VPGL---TGVTAIAAGDYHTLAVRQDGTVWA 230
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+ GQ + T P V G V ++AG H+ +
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLTG-VTAISAGESHTVAV 272
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQLG + L P +V L G+ VA G HT A+ G ++AWG
Sbjct: 29 WAWGNNAWGQLGDGTRT---DRLTPVQVPGLTGV--TAVAAGRHHTFAVRQDGTVWAWGL 83
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G T + + +P L GV +A G HT +DG + W
Sbjct: 84 NVWGQLGDGTHTERHTPV---------QVPGL---TGVTAIAAGRRHTFAVSQDGTVWAW 131
Query: 126 GYNSYGQ 132
G N +GQ
Sbjct: 132 GDNDWGQ 138
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S + P +V L G+ +A G HT A+ G ++AWG
Sbjct: 731 VWAWGYNLWGQLGDGSSTA---RSTPVQVQELTGV--SALAAGYAHTVAVKQDGTVWAWG 785
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
QLG G T ++ + E T GV + G HT +G
Sbjct: 786 NNSGTQLGNGSSTDRYTPVWVEGLT------------GVSALTAGRFHTAAVSPEGFGWA 833
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
WG N++GQ + T A P PVD + E
Sbjct: 834 WGRNNFGQVGD--GTTADRPRPVDVVIQE 860
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 13/124 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ G HT A+ G +AWG GQLG G TR+ P + +P L
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDG--TRTDRLTPVQ-------VPGL--- 56
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
GV VA G HT +DG + WG N +GQ + T P V G V +AAG
Sbjct: 57 TGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTG-VTAIAAG 115
Query: 161 GGHS 164
H+
Sbjct: 116 RRHT 119
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 33/176 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ T+G+ GQLG L + P+ V AL + ACG HT A TS G +Y++
Sbjct: 626 ELLTFGMNDCGQLG---LDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSF 682
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNI--PILVVPN------GVQLVACGHSHTLV 115
G GQLGLG + RNI P LV + + V+CG+ HT+
Sbjct: 683 GKNDYGQLGLG---------------HARNIKTPALVKTSLGESDEKIVAVSCGYYHTVT 727
Query: 116 YMRDGKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GK+ WG N YGQ + K++ + P P+ +++ + G HS +L
Sbjct: 728 ISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMS---SKIKNASCGCYHSLIL 780
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y++G GQLG ++ L + + I V+CG HT ++ KG L W
Sbjct: 678 EVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITW 737
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G GQLG+G + S F+P + +N +CG H+L+ M +G+
Sbjct: 738 GRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKN------------ASCGCYHSLILMSNGR 785
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLT 168
+ +G N+ GQ A + A P PV EV ++AAG S +LT
Sbjct: 786 VMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 837
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++T GL GQ G+ + + ++ ++ V AL GI I VA G H A+ S GA+++
Sbjct: 518 VFTCGLNKSGQCGNGTFE--ERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFS 575
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG T S S P D+ I A + H+ V +G++
Sbjct: 576 WGYNDRGQLGLG-STISKSHTPRMIDSLREKYHITT-------AAVSYHHSAVVSSNGEL 627
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
+G N GQ + + + P VD +V AA G + V
Sbjct: 628 LTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTV 671
>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
Length = 1088
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +I++WG G G+LGH D P+ V +L+GI K VACG TCALT G +Y
Sbjct: 318 HGEIFSWGQGKCGRLGHKINMDLDH---PKLVDSLNGIAAKSVACGEYQTCALTKAGEVY 374
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G + ++P + + I I VACG HT V G+
Sbjct: 375 TWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISI-------SNVACGEWHTAVVSACGR 427
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ +G ++G + P V+ G V+ +A G H+A + D
Sbjct: 428 LFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 476
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------- 54
++T+G G+ G LGH +L S + P+ V +L+G+ +K VACG HT A+
Sbjct: 428 LFTYGDGTFGALGHGNLISLSQ---PKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKF 484
Query: 55 -TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN---GVQLVACGH 110
++ G L+ WG G+LG G R +P V P V+CG
Sbjct: 485 KSAVGKLFTWGDGDKGKLGHGDNERKL-------------LPTCVAPLVDCDFAQVSCGR 531
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLT 168
T+ G+++ G + +GQ N S A + V+ + E V+ +++G H A LT
Sbjct: 532 MLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASV-AIVEGKLKEEFVKAISSGSYHVASLT 590
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G G+LGH +++LLP V L V+CG + T LT+ G +Y G
Sbjct: 491 LFTWGDGDKGKLGH---GDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMG 547
Query: 65 GCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG L + S + + + F V+ ++ G H G+++
Sbjct: 548 SSIHGQLGNLSSRDASVAIVEGKLKEEF-----------VKAISSGSYHVASLTSTGRVY 596
Query: 124 GWGYNSYGQ 132
WG ++GQ
Sbjct: 597 TWGKGAHGQ 605
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLG+ S + ++ + L F+K ++ G H +LTS G +Y WG
Sbjct: 543 VYTMGSSIHGQLGNLSSRDASVAIVEGK---LKEEFVKAISSGSYHVASLTSTGRVYTWG 599
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT 113
GQLGLG D+ RN+P V G V+ +ACG + T
Sbjct: 600 KGAHGQLGLG-------------DSDDRNLPTFVEALGDKQVESIACGSNFT 638
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
LLP+ + + + ++ ++ GG H +T G +++WG + G+LG ++
Sbjct: 289 LLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLG------------HKI 336
Query: 88 DTYFRNIPILVVPNGV--QLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN--EKSTYAWY 143
+ + ++ NG+ + VACG T + G+++ WG + +G + E S W
Sbjct: 337 NMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWL 396
Query: 144 PSPVDWCVG--EVRKLAAGGGHSAVLTDAC 171
P + + + +A G H+AV++ AC
Sbjct: 397 PQKLSGPLKGISISNVACGEWHTAVVS-AC 425
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WGL S G+LGH + + +P + A I +ACG H+ AL G +YAWG
Sbjct: 229 VYSWGLCSYGKLGH---PTKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWG 285
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDG 120
G+LGLG ++ +IP ++P+ + +ACG +L G
Sbjct: 286 NGSGGRLGLG-------------NSEVVSIP-KIIPHFEDEKITSIACGQEFSLALSDSG 331
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTDA 170
K+ WG +G + ST +P V + +++ G HS VL+ +
Sbjct: 332 KVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHSMVLSKS 382
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YT+G +LGH SG+ P V G IK + G L+ A+Y W
Sbjct: 384 DVYTFGSNIDCRLGH----SGNGST-PTMVQI--GSKIKKIGAGANFNAVLSESNAIYTW 436
Query: 64 GGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG L P R+++ P T ++P + + G+ H +V G++
Sbjct: 437 GSNIHCQLGVLLPDHRNYTGEPQVVKT--------LLPYPISTIEVGYEHVVVLTDTGEV 488
Query: 123 HGWGYNSY-----GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
+G NS G+A E + P + V K+AAGG S +
Sbjct: 489 FTFGDNSMMQCGVGEAIKEVCNFTRVKIPDN---STVFKIAAGGNSSLI 534
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+ G LT G +Y+WG C G+LG P S IP+ F+N +
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLG-HPTKNDIS-IPSMISA-FKN-------KQI 262
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 162
+ACG H+L G ++ WG S G+ S P + E + +A G
Sbjct: 263 TQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQE 322
Query: 163 HSAVLTDA 170
S L+D+
Sbjct: 323 FSLALSDS 330
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 33/176 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ +G+ GQLG L + P+ V +L I +VACG HT A+TS G +Y++
Sbjct: 631 ELLMFGMNDCGQLG---LDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSF 687
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRN--IPILVVPN------GVQLVACGHSHTLV 115
G GQLGLG + RN +P LV + + V+CG+ HT+
Sbjct: 688 GKNDYGQLGLG---------------HARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVT 732
Query: 116 YMRDGKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GK+ WG N YGQ + + K++ + P P+ +++ + G H+ +L
Sbjct: 733 ISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLS---SKIKTASCGCYHTLIL 785
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y++G GQLG ++ L + + I V+CG HT ++ KG L W
Sbjct: 683 EVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITW 742
Query: 64 GGCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G GQLG+G + S ++P L + + ++ +CG HTL+ M +G+
Sbjct: 743 GRNDYGQLGIGSKDHKNSAQYVP------------LPLSSKIKTASCGCYHTLILMSNGR 790
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLT 168
+ +G N+ GQ A + A P PV EV ++AAG S +LT
Sbjct: 791 VMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++T GL GQ G+ + + ++ ++ V AL GI I VA G H A+ S GA+Y+
Sbjct: 523 VFTCGLNKSGQCGNGTFE--ERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYS 580
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG T S S P D+ I A + H+ V +G++
Sbjct: 581 WGYNDRGQLGLG-STISKSHTPRMIDSLREKYHITT-------AAVSYHHSAVVSSNGEL 632
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
+G N GQ + + + P VD +V ++A G H+ +T
Sbjct: 633 LMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT 679
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 16/132 (12%)
Query: 4 DIYTWGLGSVGQL--GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++ G + G+L GHC+ S + V I+D+A G + GA++
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEH-----VPFFSAKAIRDIAGGNEVLAVVMKDGAVF 524
Query: 62 AWGGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G ++GQ G G + R P R + +V+ + A G H L DG
Sbjct: 525 TCGLNKSGQCGNGTFEERVIIATP------VRALSGIVI--NMVAAANGCEHMLAVASDG 576
Query: 121 KIHGWGYNSYGQ 132
++ WGYN GQ
Sbjct: 577 AVYSWGYNDRGQ 588
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHTCALTSKGALYA 62
++ WGL + GQLG S + VA+ G+ ++ +A GG HTCALTS G ++
Sbjct: 432 VWCWGLNNSGQLGDGS------DTDSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWC 485
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDG 120
WG +GQLG + T + P+ V +P+GV +A G HT G
Sbjct: 486 WGRNNSGQLG-------------DGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSG 532
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+ WGYN GQ + +T P V V +AAG H+ LT +
Sbjct: 533 GVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSS 582
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + + P V L ++ +A G HTCAL S G ++ W
Sbjct: 329 EVWCWGGNGFGQLGDGTTTA---RSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCW 384
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G +GQLG G T R+ P V +P+GV +A G HT M G
Sbjct: 385 GRNNSGQLGDGTTTA-------------RSTPAAVSGLPSGVTAIAAGGLHTCALMSSGG 431
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+ WG N+ GQ + T + P V V +AAGG H+ LT +
Sbjct: 432 VWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTSS 480
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 22 QSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
Q GD RR VA+ G+ + +A GG+HTCALT G ++ WG GQLG G
Sbjct: 186 QLGDGTTTNRRTPVAVSGLPSGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDG---- 241
Query: 79 SFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
+ TY R+ P V +P+G+ +A G HT M G + WG N GQ +
Sbjct: 242 --------TTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDG 293
Query: 137 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
T + P V V +AAG H+ LT +
Sbjct: 294 SDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGS 327
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
++ WG GQLG D R VA+ G+ + +A G HTCALTS G ++
Sbjct: 534 VWCWGYNLSGQLG-------DGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVW 586
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG GQLG G T R P+ V +P+GV +A G HT
Sbjct: 587 CWGANFDGQLGDGTTTN-------------RTTPVAVSGLPSGVTAIAAGGWHTCALTSS 633
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G++ WG N YGQ + +T P V V +AAG H+ LT +
Sbjct: 634 GEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGWEHTCALTSS 684
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ WG GQLG + + G LP V A +A G HTCALT G +
Sbjct: 74 VMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTA--------IAAGNYHTCALTGSGGV 125
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 118
WG +GQLG G T+ R+ P V +P+GV +A G HT M
Sbjct: 126 RCWGANYSGQLGNGL-------------TFGRSTPGAVSGLPSGVTAIAAGGDHTCALMS 172
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G + WG N YGQ + +T P V V +AAGG H+ LT +
Sbjct: 173 SGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGLHTCALTGS 224
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHTCALTSKGALY 61
++ WG GQLG D R VA+ G+ + +A GG HTCALTS G ++
Sbjct: 585 VWCWGANFDGQLG-------DGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVW 637
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG GQLG G T R+ P V +P+GV +A G HT
Sbjct: 638 CWGDNYYGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGWEHTCALTSS 684
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G++ WG N YGQ + +T P V V +AAG H+ LT +
Sbjct: 685 GEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCALTGS 735
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P V L + +A GG+HTCAL S G ++ W
Sbjct: 226 EVWCWGYNYYGQLGDGTTTY--SRSTPAAVGGLP-SGMTAIAAGGLHTCALMSSGGVWCW 282
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G +GQLG G T S + P+ V +P+GV +A G HT G+
Sbjct: 283 GRNDSGQLGDGSDTDS-------------STPVAVSGLPSGVTAIAAGDYHTCALTGSGE 329
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WG N +GQ + +T P+ V V +AAG H+ L
Sbjct: 330 VWCWGGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCAL 375
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++ WG GQLG + + G LP V A +A G HTCALTS G
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTA--------IAAGWEHTCALTSSGE 686
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 117
++ WG GQLG G T R+ P V +P+GV +A G HT
Sbjct: 687 VWCWGDNYYGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGVYHTCALT 733
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G + WG N GQ + + Y +PVD
Sbjct: 734 GSGGVMCWGNNGDGQLGDGRPLY--RTTPVD 762
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF----IKDVACGGVHTCALTSKGAL 60
+Y+WG G G+LGH ++ + + LP+ + G+F I ++ G H+ A+T G L
Sbjct: 443 VYSWGDGEFGKLGHGNVAT---QKLPK---VIRGVFKNQIITFISAGSRHSAAITKDGDL 496
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 119
Y WG + G+LG G D+ + +P LV + VA G SHT+V +D
Sbjct: 497 YTWGEGEHGRLGHG-------------DSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKD 543
Query: 120 G-KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G G+ + + +YP VD G ++K+AAG S LT
Sbjct: 544 EMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALT 594
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ ++T+G G G+LGH + + E P+ V AL GI IK +A G + ALT G +Y
Sbjct: 545 MTVWTFGAGDNGKLGHGNTK---MEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYV 601
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
W GC LG+G + +P ++ R++ I+ ++ G H L D ++
Sbjct: 602 W-GC-GPCLGVG-AADAVHLLPKIVES-LRDVHIVD-------ISLGDCHCLALSADHEV 650
Query: 123 HGWGYNSYGQ 132
+ WG N+ GQ
Sbjct: 651 YSWGNNNMGQ 660
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
HT ALT G +Y+WG + G+LG G + +P F+N + ++ G
Sbjct: 433 HTLALTKNGVVYSWGDGEFGKLGHG--NVATQKLPKVIRGVFKN-------QIITFISAG 483
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
H+ +DG ++ WG +G+ + S+ P+ V + ++AAG H+ VL+
Sbjct: 484 SRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVR-SIDAASQVAAGCSHTVVLS 541
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG G +G + LLP+ V +L + I D++ G H AL++ +Y+WG
Sbjct: 599 IYVWGCGPCLGVG----AADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWG 654
Query: 65 GCQAGQLGLG 74
GQ GLG
Sbjct: 655 NNNMGQCGLG 664
Score = 43.1 bits (100), Expect = 0.096, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y WG S QL + DK L P++ A + G T AL G+L+A
Sbjct: 338 EAYAWGSNSSHQLVE---GNKDKILTPKKNDAFKNAI--QLEAGQYCTFALFDDGSLHAC 392
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGLG + ++ + + +NI + G SHTL ++G ++
Sbjct: 393 GKGSHGKLGLGDSSSKQCL--HKLNLFNQNIDQISSSKG------SDSHTLALTKNGVVY 444
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLT 168
WG +G+ + P + + ++AG HSA +T
Sbjct: 445 SWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAIT 491
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 4 DIYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
++Y+WG ++GQ LGHC LP +V+ALDGI I+ ++ G H+ A T+
Sbjct: 649 EVYSWGNNNMGQCGLGHCFTPVS----LPTKVLALDGIKIEQISTGTSHSFAWTT 699
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ WG G GQLG +S + P+ + + G + +A G ++ A+T G+++ W
Sbjct: 519 DVFAWGRGFEGQLGLS--KSIEIASTPQYIKSFYGKPVSYIAAGSQYSLAITKDGSVWGW 576
Query: 64 GGCQAGQLGLGPQTR-----SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G + GQLG+G Q SF +E+ F +Q A G+ H+ +
Sbjct: 577 GEAKLGQLGMGKQREVRLPTKISFGDDENAKNF-----------IQCSA-GYGHSAALTQ 624
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+G ++ WG+N++GQ W PS V +
Sbjct: 625 EGHLYTWGFNNFGQLGQNNFETQWTPSKVHY 655
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
D++++G G+ +GH G K +L P + L I +ACG H+ LT K ++A
Sbjct: 467 DVFSYGSGTFSAVGH----GGSKGQLNPTVLKPLRDKRIVQIACGENHSLVLTDKADVFA 522
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGL ++ + P +++ V +A G ++L +DG +
Sbjct: 523 WGRGFEGQLGLS-KSIEIASTPQYIKSFY--------GKPVSYIAAGSQYSLAITKDGSV 573
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK----LAAGGGHSAVLT 168
GWG GQ K P+ + + E K +AG GHSA LT
Sbjct: 574 WGWGEAKLGQLGMGKQREVRLPTKISFGDDENAKNFIQCSAGYGHSAALT 623
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ +WG GQLG QS D+ + LP+ + +L + +ACG H+ ALTS G LY
Sbjct: 106 QVLSWGDNDCGQLG----QSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELY 161
Query: 62 AWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+WG GQLG+ PQ S P R +L +P + +ACG +H+ + +
Sbjct: 162 SWGSNIYGQLGVKPPQELSHCNYP------LRLTTLLGIP--LATIACGGNHSFLISKSS 213
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDW--CVGEVRKLAAGGGHSAVLTD 169
+ G+G N+ GQ + YP+ + +G VR +A G S LT+
Sbjct: 214 AVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTN 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG Q P R+ L GI + +ACGG H+ ++ A++ +
Sbjct: 159 ELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGF 218
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL ++ R++ P + T R + GV+ VACG ++ +G +
Sbjct: 219 GRNNCGQLGLNDESNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + +T P V +G + ++A G H+ L +
Sbjct: 268 FTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPS 316
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH +L + L+P L + +ACG H+ ALT G + +WG
Sbjct: 57 VYACGNNDQAQLGH-NLPTKRPLLIPE----LQNYVVVAIACGSRHSMALTEWGQVLSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG Q+ S I E R++ V V +ACG++H+L G+++
Sbjct: 112 DNDCGQLG---QSTDQSII--ELPKIIRSL----VSKHVVQIACGNNHSLALTSCGELYS 162
Query: 125 WGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N YGQ ++ ++ YP + +G + +A GG HS +++ + ++
Sbjct: 163 WGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV 215
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+D++ WG S GQLG ++ ++ L+P ++ ++ +ACG HT LT+ G +YA
Sbjct: 1 MDLFCWGNASHGQLGMGGIED-EQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG T+ IP E Y V +ACG H++ G++
Sbjct: 60 CGNNDQAQLGHNLPTKRPLLIP-ELQNYV-----------VVAIACGSRHSMALTEWGQV 107
Query: 123 HGWGYNSYGQAANEK-STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ + P + V + V ++A G HS LT
Sbjct: 108 LSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH S E+LPR V+ L G I VACG HT AL S+G +Y +
Sbjct: 267 VFTCGAGTYGQLGHGS---NTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGF 323
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 324 GLGSSGQLG 332
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G + GQLG L P ++ L + ++ VACG + LT++G ++ G
Sbjct: 215 VFGFGRNNCGQLG---LNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCG 271
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD-G 120
GQLG G T +P +V+ + + VACG+ HTL + G
Sbjct: 272 AGTYGQLGHGSNTNEM-------------LPRMVMELMGSTITQVACGNRHTLALVPSRG 318
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV 147
+++G+G S GQ N + P V
Sbjct: 319 RVYGFGLGSSGQLGNRSTNSVTLPQEV 345
>gi|145540984|ref|XP_001456181.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423991|emb|CAK88784.1| unnamed protein product [Paramecium tetraurelia]
Length = 1005
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G LG+ ++ S +P++V+ + G K + CGG+H A+ + LY WG
Sbjct: 747 VYSWGCGEGGLLGNNTVISTH---IPQQVM-IPGP-CKQMKCGGLHNAAIV-EDRLYVWG 800
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL P E IP V VQ VACG +HT++ +++G
Sbjct: 801 RGDGGQLGL----------PLELGMEIA-IPTKVEVENVQAVACGDAHTIILNSQKQVYG 849
Query: 125 WGYNSYGQ 132
WGYN GQ
Sbjct: 850 WGYNEQGQ 857
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 45/198 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G GQLG L+ G + +P +V + ++ VACG HT L S+ +Y WG
Sbjct: 796 LYVWGRGDGGQLG-LPLELGMEIAIPTKVEVEN---VQAVACGDAHTIILNSQKQVYGWG 851
Query: 65 GCQAGQLGLGPQTRSFS----FIPNESDTYFRNIPILVVPNG------------------ 102
+ GQLGL S I + Y ++ + +G
Sbjct: 852 YNEQGQLGLSLDITSVVQPTLLIEDVDQIYAGSLQSYFLKDGNLYGCGCNDDGQLGIDTN 911
Query: 103 -------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
V+ +A G HTL GK++GWG N +G+ + T P +
Sbjct: 912 AEQKGIQQILNYKVESIAIGQDHTLC-QSQGKVYGWGLNKFGELCKQSQT-----KPTEL 965
Query: 150 CVGEVRKLAAGGGHSAVL 167
+V+ + G HS V+
Sbjct: 966 FAYKVQSIGCGAYHSGVV 983
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSKGALYA 62
I WG QLG +L R ++L D +F+K +ACG HT A+++ G +Y
Sbjct: 646 IILWGFNQNYQLGQMY------QLKYRIPISLKSDVMFVK-MACGYKHTMAISNMGKVYC 698
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+ G + + P+ ++ F I I CGH H++ G +
Sbjct: 699 WGNNEDGKCGKQSVIKYVDY-PHLIESSFDCISI----------ECGHDHSVYVNSKGGV 747
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ WG G N P V G +++ GG H+A + +
Sbjct: 748 YSWGCGEGGLLGNNTVISTHIPQQV-MIPGPCKQMKCGGLHNAAIVE 793
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG Q P V LD + + D+A GG H+ ALT KG +Y WG
Sbjct: 217 LLAWGNNEYGQLGTGDTQPTSH---PVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGFGDNDKSSKMVPQKVN--------LLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 79/209 (37%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E +P RV AL + I A GG H A+ +G YAWG
Sbjct: 59 MFTWGWNQRGTLGHPP--ETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLG-------LGPQTRSFSFIPNESDTYFR------------------------- 92
G + GQ G +G R IP
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 93 -----NIPILVVPNGVQ------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
+I + VP VQ ++A G H L DG++ WG N YGQ +
Sbjct: 177 PWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPT 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+P PV + +AAGG HS LTD
Sbjct: 237 SHPVPVHGLDDLTLVDIAAGGWHSTALTD 265
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG G GQLG + + +++ V AL+ ++ V G ++ A+ G ++ WG
Sbjct: 7 IIAWGSGEDGQLG---IGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ + IP+ N+ I A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTEN-IPSRVKA-LANVKIT-------QAAIGGWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEK-STYAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P++V L I V+CGG H+ ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN---------------GVQLVAC 108
G G+LG G + + + +PI++ P + +AC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIMIPPPEGSFNHADEEEEGKWSAKWIAC 377
Query: 109 GHSHTLVYM 117
G HTL +
Sbjct: 378 GGRHTLAIV 386
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ S G++G + + + P RV+ L GI ++ G H+ AL + G ++AWG
Sbjct: 469 VWAWGVNSRGEVGDGTNANTSQ---PVRVLGLSGI--TAISAGAYHSLALRTDGTVWAWG 523
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G T +N P+ V +GV +A GHSH+L DG +
Sbjct: 524 FNRYGQLGNG-------------GTVDQNQPVQVAGLSGVTAIAAGHSHSLALCGDGTVW 570
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVL 167
WGYN GQ T W+ PV VG V + AGG HS L
Sbjct: 571 AWGYNFDGQIG--SGTNNWHILPVQ-AVGLSSVTAITAGGYHSLAL 613
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ ++ P +V L G+ +A G H+ AL G ++AWG
Sbjct: 519 VWAWGFNRYGQLGNGGTVDQNQ---PVQVAGLSGV--TAIAAGHSHSLALCGDGTVWAWG 573
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+G G T ++ +P ++ V + V + G H+L DG +
Sbjct: 574 YNFDGQIGSG--TNNWHILPVQA----------VGLSSVTAITAGGYHSLALRSDGTVWS 621
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN GQ N P PV G V +AAG HS L
Sbjct: 622 WGYNGSGQLGNGALASLNAPGPVSNLTGVV-SIAAGDYHSLAL 663
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 25/144 (17%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYAWG 64
+TWGL ++GQLG D R V A G+ + G H+ A+ S GA++AWG
Sbjct: 272 WTWGLNTMGQLG-------DGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWG 324
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
+ QLG G T S +PI + G+ LVA G H+L DG +
Sbjct: 325 DNRYRQLGNGNMTSSL-------------LPIQAGLSGGITLVA-GFKHSLTLRADGTVW 370
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
WG N +GQ + TY SPV
Sbjct: 371 SWGDNVFGQLGD--GTYQPRMSPV 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG+ +L S + P V L G+ +A G H+ AL S G + AWG
Sbjct: 619 VWSWGYNGSGQLGNGALASLNA---PGPVSNLTGVV--SIAAGDYHSLALRSDGTVRAWG 673
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQ+G G T R++P++V +GV V G H++ DG
Sbjct: 674 FNFDGQIGDGSLTN-------------RHVPVMVAGMSGVVSVIAGDHHSMAMRSDGTTW 720
Query: 124 GWGYNSYGQ 132
WG N+ GQ
Sbjct: 721 AWGANTEGQ 729
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 18/140 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG ++ + P +V+ L G+ ++ G H AL S G + WG
Sbjct: 221 VWAWGDNRSGQLGDGTVTTRGN---PLQVLGLTGVVT--LSAGASHCVALRSNGTAWTWG 275
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T+ R++P V V G+ H+L DG +
Sbjct: 276 LNTMGQLGDGTTTQ-------------RSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWA 322
Query: 125 WGYNSYGQAANEKSTYAWYP 144
WG N Y Q N T + P
Sbjct: 323 WGDNRYRQLGNGNMTSSLLP 342
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQ+G + + +LP + V L + + GG H+ AL S G +++WG
Sbjct: 569 VWAWGYNFDGQIGSGT---NNWHILPVQAVGLS--SVTAITAGGYHSLALRSDGTVWSWG 623
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G + P + T GV +A G H+L DG +
Sbjct: 624 YNGSGQLGNGALASLNAPGPVSNLT------------GVVSIAAGDYHSLALRSDGTVRA 671
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
WG+N GQ + T P V G V +A
Sbjct: 672 WGFNFDGQIGDGSLTNRHVPVMVAGMSGVVSVIA 705
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG + S +P +V L G+ VA GG T AL + G ++AWG
Sbjct: 171 VWAWGDNRYRQLGPLTAGS---SSVPVQVPGLGGVIA--VAAGGNTTLALRADGTVWAWG 225
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
++GQLG G T R P+ V+ GV ++ G SH + +G
Sbjct: 226 DNRSGQLGDGTVTT-------------RGNPLQVLGLTGVVTLSAGASHCVALRSNGTAW 272
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N+ GQ + +T P+ V + +V AG HS AV +D
Sbjct: 273 TWGLNTMGQLGDGTTTQRSVPAQVG--LTDVMAAVAGNYHSLAVRSDGA 319
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ P +V L VA G H+ AL S G ++AWG
Sbjct: 71 VWAWGFNRQGQLGNGLFT---NSPTPVKVKNLTDAVA--VASGDSHSLALRSDGTVWAWG 125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G T P+ V +GV VA G +H+ DG +
Sbjct: 126 DNYSGQLGTG-------------STAVSAEPVQVQGLSGVLSVASGFAHSAALRSDGTVW 172
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N Y Q + + P V +G V +AAGG + L
Sbjct: 173 AWGDNRYRQLGPLTAGSSSVPVQVP-GLGGVIAVAAGGNTTLAL 215
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + Q + P RV A + VA G +H+ S G +++WG
Sbjct: 369 VWSWGDNVFGQLGDGTYQ---PRMSPVRV-ATTTLGNPGVASGQLHSVYRDSAGRVWSWG 424
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G + P L G V G+ HT+V D +
Sbjct: 425 DNEDGQLGNGIGADKLT-------------PALTGLTGAVSVVAGNRHTVVLKGDTTVWA 471
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG NS G+ + + P V G + ++AG HS L
Sbjct: 472 WGVNSRGEVGDGTNANTSQPVRVLGLSG-ITAISAGAYHSLAL 513
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ ++ G H+ + S G+++AWG + GQLG G F + + +N+ V
Sbjct: 52 VARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGL------FTNSPTPVKVKNLTDAVA- 104
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
VA G SH+L DG + WG N GQ + + P V G V +A+G
Sbjct: 105 -----VASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG-VLSVASG 158
Query: 161 GGHSAVL 167
HSA L
Sbjct: 159 FAHSAAL 165
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQ+G SL +P V + G+ V G H+ A+ S G +AWG
Sbjct: 669 VRAWGFNFDGQIGDGSLT---NRHVPVMVAGMSGVV--SVIAGDHHSMAMRSDGTTWAWG 723
Query: 65 GCQAGQLGLGPQTRSFSFIP 84
GQLG G TR+ S IP
Sbjct: 724 ANTEGQLGDG--TRNDSIIP 741
>gi|432939913|ref|XP_004082625.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Oryzias
latipes]
Length = 955
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 4 DIYTW-----GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++YTW G VGQLGH S + P+RV L G I+ VACG T +T +
Sbjct: 377 ELYTWADVQGGAKMVGQLGHGDQASYRQ---PKRVEKLQGKAIRQVACGADFTACVTDED 433
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+Y +G G +G+ Q S P + +F P VQLV+CG +H +V R
Sbjct: 434 QMYMFGSDYDGCIGVEGQLGSQVLEPVLLE-FFEGRP-------VQLVSCGDNHVVVLTR 485
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD-----ACS 172
D I+ WG YG+ E P V +G + ++ G + LT+ AC
Sbjct: 486 DKDIYSWGCGEYGRLGLESEDEFSSPMQVKVPIGASISSVSCGSDSTFFLTESGKVLACG 545
Query: 173 LKELCEFRLAESVT 186
E + L + ++
Sbjct: 546 NNEFNKLGLNQGIS 559
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIY+WG G G+LG L+S D+ P +V G I V+CG T LT G + A
Sbjct: 488 DIYSWGCGEYGRLG---LESEDEFSSPMQVKVPIGASISSVSCGSDSTFFLTESGKVLAC 544
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--------GVQLVACGHSHTLV 115
G + +LGL + S I N ++ IP +Q ++ G +HT
Sbjct: 545 GNNEFNKLGL---NQGISGIKNHPGEGYQGIPYTTAMTLVKQLSRFKIQSISPGKTHTAA 601
Query: 116 YMRDGKIHGWGYNSYGQ 132
G++ +G N +GQ
Sbjct: 602 IDERGRLITFGCNKFGQ 618
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ ++TWG GS GQLGH ++ D E LPR V AL I I VA G H AL+ G +Y
Sbjct: 284 MKVFTWGSGSKGQLGH--VEKSD-EWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYT 340
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-LVACGHSHTLVYMRDGK 121
WG + GQLG G + P + N V G L+ACG S TL+ G+
Sbjct: 341 WGEGEHGQLGHGDLNSCST--PKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGR 398
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAVLT 168
+ +G + +G + A P + + + R+ L+AG H A +T
Sbjct: 399 LISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVT 448
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
++ WG QLG Q+ + P+ V L G I DV+ G H A+ S G L+
Sbjct: 180 LFAWGCSHNYQLGTGQYQA---QPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFT 236
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG C G+LGL +S +P + F ++V V CG + D K+
Sbjct: 237 WGLCDHGRLGL----KSGKDVPYPTRVDFLKDEVIVD------VTCGMYSSACISHDMKV 286
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
WG S GQ + + + W P V
Sbjct: 287 FTWGSGSKGQLGHVEKSDEWLPRSV 311
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK----DVACGGVHTCALTSKGAL 60
+ ++G+ G LG G+K L R + I K ++ G H A+TSKG +
Sbjct: 399 LISFGMSEFGALG-----LGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNV 453
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG G +G P R++S P+ Y +P+ +CG ++T++ +DG
Sbjct: 454 YTWGQGCFGAVG-KPARRAYSNPPDCRKPYKLELPL---DKRACATSCGGNYTVILSKDG 509
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + S D+ P+ + AL G+ + +ACGG H+ LT++G +Y W
Sbjct: 4058 EVYSWGEGEDGKLGHGNRVSYDR---PKLITALSGLEVVCIACGGAHSACLTARGRIYTW 4114
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ + FR I VACG + TL D
Sbjct: 4115 GKGRYGRLGHGDSEDQLIPKLVEALSSFRVID----------VACGSGDAQTLCITDDDN 4164
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+ WG YG+ S P +D G V K+ G S L
Sbjct: 4165 VWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVAL 4211
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG G G+LGH G++ L PR + +L G + +ACG H+ +T++G LY
Sbjct: 3165 VYSWGEGEDGKLGH-----GNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYT 3219
Query: 63 WGGCQAGQLGLGPQTRSFSFIPN--ESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMR 118
WG + G+LG G + +P E+ +R I VACG + TL
Sbjct: 3220 WGLGEYGRLGHGDD--NIQLVPKMVEALANYRVIQ----------VACGSRDAQTLALTA 3267
Query: 119 DGKIHGWGYNSYGQ 132
GK+ WG +G+
Sbjct: 3268 CGKVFSWGDGDFGK 3281
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S + + P RV + G I +A G +H A T G +Y WG
Sbjct: 4217 VYTWGKGDYHRLGHGSYEHVRR---PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWG 4273
Query: 65 GCQAGQLGLG 74
GQLG G
Sbjct: 4274 DNDEGQLGDG 4283
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH +++S +P+ V AL GI I D++ G H AL+S+G L+ WG
Sbjct: 695 VYTWGKGDGYRLGHGNMESTK---IPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWG 751
Query: 65 GCQAGQL 71
+ Q+
Sbjct: 752 THERTQI 758
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FI VAC GG H AL++ G +Y+WG + G+LG G +
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRV---------- 4076
Query: 88 DTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
+Y R P L+ +G+++V ACG +H+ G+I+ WG YG+ + S P
Sbjct: 4077 -SYDR--PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIP 4133
Query: 145 SPVD 148
V+
Sbjct: 4134 KLVE 4137
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 51/177 (28%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGAL 60
+YTWGLG G+LGH GD +L+P+ V AL + VACG T ALT+ G +
Sbjct: 3217 LYTWGLGEYGRLGH-----GDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKV 3271
Query: 61 YAWGGCQAGQLGLG-------PQT---------------RSFSFIPNES----------- 87
++WG G+LG G P FS
Sbjct: 3272 FSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDY 3331
Query: 88 -------DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
D + R ++ G ++ VA G H L + ++ WG N +GQ N
Sbjct: 3332 FRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGN 3388
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL QLG G K +P AL + +A G ++ G L+A G
Sbjct: 3059 VFVWGLNDKDQLGGVK---GSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG S + ++ Y ++ + V V G H L DGK++
Sbjct: 3116 EGTNGRLGLG---HSNNVSTPRANPYLSHVLVRRV-----AVHSGGKHALALTADGKVYS 3167
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG G+ + P ++ GE V +A G HSA +T
Sbjct: 3168 WGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVT 3212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++ G G+ G+LG L + PR L + ++ VA GG H ALT+ G +Y+
Sbjct: 3111 LFACGEGTNGRLG---LGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYS 3167
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G + + ES R I I ACG +H+ G +
Sbjct: 3168 WGEGEDGKLGHGNRITLEAPRLIESLAGERVISI----------ACGSAHSACVTARGHL 3217
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG YG+ + P V+
Sbjct: 3218 YTWGLGEYGRLGHGDDNIQLVPKMVE 3243
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG G G+LG G E LP R+ L G+ + V CG + AL G++Y
Sbjct: 4164 NVWSWGDGDYGKLGR-----GGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVY 4218
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG +LG G S+ + ++V +A G H + G+
Sbjct: 4219 TWGKGDYHRLGHG----SYEHVRRPMRVTGMQGKMIVS------IATGSLHCVACTDTGE 4268
Query: 122 IHGWGYNSYGQAANEKSTYAWYP 144
++ WG N GQ + + A P
Sbjct: 4269 VYTWGDNDEGQLGDGTTLAAQRP 4291
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
++WG+G G+LGH + D P+ + L + VA G + +TS+GALY WG
Sbjct: 547 WSWGIGEDGRLGHGDTAARDA---PQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGR 603
Query: 66 CQAGQLG-------LGPQTRSFS 81
G+LG L PQ SF+
Sbjct: 604 GAQGRLGHGTIENCLTPQPVSFN 626
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH C P V AL G + VA G +H A+TS+ ++A
Sbjct: 3322 EVWTWGKGDYFRLGHGCDAHVRR----PTLVEALRGRRVIHVAVGALHCLAVTSENQVWA 3377
Query: 63 WGGCQAGQLGLG 74
WG GQ G G
Sbjct: 3378 WGDNDHGQQGNG 3389
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 23/128 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G +LGH EL P++VV L+ +++ V+CG HT A+T++G +YAW
Sbjct: 411 ELYTWGNGQYFRLGHGVTTD---ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAW 467
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +G+LG+ +S ++P V G+ H++ G ++
Sbjct: 468 GDGMSGKLGVQENNKSL------------HLPTRVSAGGL--------HSMALTDQGILY 507
Query: 124 GWGYNSYG 131
WG + G
Sbjct: 508 SWGSSKGG 515
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I+TWG + GQLG + +L P ++ + + G H+ ++ + LY WG
Sbjct: 362 IFTWGKNTRGQLGQ---GHRNDQLKPTMIII--EVMATSICSGDQHSAFISDEKELYTWG 416
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +LG G T D + +++ V V+CG +HTL +G ++
Sbjct: 417 NGQYFRLGHGVTT----------DELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYA 466
Query: 125 WGYNSYGQAANEKSTYAWY-PSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG G+ +++ + + P+ +++AGG HS LTD
Sbjct: 467 WGDGMSGKLGVQENNKSLHLPT----------RVSAGGLHSMALTD 502
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 15/73 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG G G+LG +Q +K L LP RV A GG+H+ ALT +G LY+W
Sbjct: 464 VYAWGDGMSGKLG---VQENNKSLHLPTRVSA-----------GGLHSMALTDQGILYSW 509
Query: 64 GGCQAGQLGLGPQ 76
G + G LG+G Q
Sbjct: 510 GSSKGGVLGIGFQ 522
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES--------DTYFR 92
IK V+CG HT +T +G ++ +G G+L L + + + N+S + F
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQ--LLLQNKSKIQKGQLGNENFV 327
Query: 93 NI----PILVVPNGVQL-VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
N+ +LV P + VACG SH++ +G+I WG N+ GQ P+ +
Sbjct: 328 NVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI 387
Query: 148 DWCVGEV--RKLAAGGGHSAVLTDACSLKELCE------FRLAESVT 186
+ EV + +G HSA ++D KEL FRL VT
Sbjct: 388 ---IIEVMATSICSGDQHSAFISDE---KELYTWGNGQYFRLGHGVT 428
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + D P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 56 ELFAWGQNLHGQLGVGKI--FDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSW 113
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG + D F ++ + V+ +ACG SHT + +DG +
Sbjct: 114 GRNDFGQLGLG----------HTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVF 163
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEFRLA 182
+G YGQ + + P V G V ++A G H+ L L ++ F
Sbjct: 164 TFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHT--LAYVSDLGKVFSFGSG 221
Query: 183 ESVTLSNA 190
E L N
Sbjct: 222 EEGQLGNG 229
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G + F +S T + + L
Sbjct: 38 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG---KIF-----DSTTAPQIVEHL--- 86
Query: 101 NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKL 157
+GV L ++ G SH++ G I+ WG N +GQ + +PS ++ + V L
Sbjct: 87 SGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFL 146
Query: 158 AAGGGHSAVLT 168
A GG H+A+LT
Sbjct: 147 ACGGSHTALLT 157
>gi|410907970|ref|XP_003967464.1| PREDICTED: RCC1 domain-containing protein 1-like [Takifugu
rubripes]
Length = 308
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 28/152 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWGLGS GQLGH L S +K PR V AL G+ + VA GG H+ ++ G LY WG
Sbjct: 116 VYTWGLGSHGQLGHGVLTSEEK---PRAVEALWGMPMVCVATGGWHSVCISDGGDLYVWG 172
Query: 65 GCQAGQLGLGPQTRSFSFIPNES------------------DTYFRNI---PIL--VVPN 101
++GQLGL P +P +S + F +I P L V P+
Sbjct: 173 WNESGQLGL-PSRSLRKTLPQQSSPKAGSSSTEETQEGDKHEEVFISIQAFPALLDVSPS 231
Query: 102 -GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ V+CG HT G ++ G+ YGQ
Sbjct: 232 CEIMAVSCGSRHTAAVTTTGDLYTCGWGDYGQ 263
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
K VA H L++ GA+Y WG GQLG G T P + + +P++
Sbjct: 98 KSVAVSAEHVMLLSATGAVYTWGLGSHGQLGHGVLTSEEK--PRAVEALW-GMPMVC--- 151
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
VA G H++ G ++ WG+N GQ
Sbjct: 152 ----VATGGWHSVCISDGGDLYVWGWNESGQ 178
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + + L+P +V L + V GG H+ A+ S G+ + WG
Sbjct: 366 VWAWGYNSTGQLGDGTTTT---RLVPVQVSGLSEVV--SVVAGGYHSLAVRSDGSAWDWG 420
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G S +++P +P+ V +GV VA G SH+L DG +
Sbjct: 421 SNAYGQLGDG----STTYLP---------VPVRVQQLSGVGAVASGSSHSLALRSDGTVW 467
Query: 124 GWGYNSYGQAAN 135
WGYNS+GQ N
Sbjct: 468 TWGYNSFGQLGN 479
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG S+ + L+P +V L + VA G H+ A+ S G ++A G
Sbjct: 269 VWGWGRNDSNQLGKGSM----RLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVG 322
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T ++ +P +P+L +GV VA H+L DG +
Sbjct: 323 SNNNGQLGDG--TTTYRLVP---------VPVL---SGVVSVAANDYHSLAVRSDGTVWA 368
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACS 172
WGYNS GQ + +T P V + EV + AGG HS AV +D +
Sbjct: 369 WGYNSTGQLGDGTTTTRLVPVQVS-GLSEVVSVVAGGYHSLAVRSDGSA 416
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + +P +V L + D G H+ A+ S G ++AWG
Sbjct: 17 VWAWGANSSGQLGDGTTTY-SPVPVPVQVQGLSEVVAVD--AGSSHSLAVRSDGTVWAWG 73
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG + T R+ P+ V+ +GV VA G SH L DG +
Sbjct: 74 SNASGQLG-------------DETTISRSTPVQVLGLSGVLFVAAGSSHVLALRYDGTVW 120
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTD--ACSLKELCEFR 180
WG NS GQ + + P G V +AAG HS AV +D A + +
Sbjct: 121 AWGSNSSGQRGDGTTNNRALPVQAQGLSG-VMAVAAGDNHSLAVRSDGSAWAWGSNASGQ 179
Query: 181 LAESVTLSNASEIEDVASRTGSEALA 206
L E T SN E V +G A+A
Sbjct: 180 LGEGTT-SNRPEPVQVQGLSGVVAVA 204
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQLG + + + P +V L G+ VA G H+ A+ S G ++AWG
Sbjct: 170 WAWGSNASGQLGEGTTSNRPE---PVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGA 224
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T R +P+ V +GV VA GH H+L DG + G
Sbjct: 225 NASGQLGDGTTTD-------------RLVPVQVQGLSGVVAVAAGHHHSLAVRNDGTVWG 271
Query: 125 WGYNSYGQ 132
WG N Q
Sbjct: 272 WGRNDSNQ 279
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQ G + + LP + L G+ VA G H+ A+ S G+ +AWG
Sbjct: 119 VWAWGSNSSGQRGDGTT---NNRALPVQAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWG 173
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG E T R P+ V +GV VA G +H+L DG +
Sbjct: 174 SNASGQLG-------------EGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVW 220
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG N+ GQ + +T P V G V +AAG HS
Sbjct: 221 AWGANASGQLGDGTTTDRLVPVQVQGLSGVV-AVAAGHHHS 260
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + S P +V+ L G+ VA G H AL G ++AWG
Sbjct: 69 VWAWGSNASGQLGDETTIS---RSTPVQVLGLSGVLF--VAAGSSHVLALRYDGTVWAWG 123
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQ G + T R +P+ +GV VA G +H+L DG
Sbjct: 124 SNSSGQRG-------------DGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAW 170
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHS-AVLTDAC 171
WG N+ GQ + T + P PV + V +AAG HS AV +D
Sbjct: 171 AWGSNASGQLG--EGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGT 218
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 4 DIYTWGLGSV--GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D W +GS GQLG + L+P V L G+ VA H+ A+ S G ++
Sbjct: 315 DGTVWAVGSNNNGQLGDGTTT---YRLVP--VPVLSGVV--SVAANDYHSLAVRSDGTVW 367
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG GQLG G T R +P+ V + V +VA G+ H+L D
Sbjct: 368 AWGYNSTGQLGDGTTTT-------------RLVPVQVSGLSEVVSVVAGGY-HSLAVRSD 413
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G WG N+YGQ + +TY P V G V +A+G HS L
Sbjct: 414 GSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSG-VGAVASGSSHSLAL 460
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHS 164
+A G SH+L DG + WG NS GQ + +TY+ P PV + EV + AG HS
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 165 -AVLTDAC--SLKELCEFRLAESVTLSNASEIE 194
AV +D + +L + T+S ++ ++
Sbjct: 61 LAVRSDGTVWAWGSNASGQLGDETTISRSTPVQ 93
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQLG S +P RV L G+ VA G H+ AL S G ++ WG
Sbjct: 417 WDWGSNAYGQLGDGSTT---YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGY 471
Query: 66 CQAGQLGLGPQTRSFSFI 83
GQLG GP + + I
Sbjct: 472 NSFGQLGNGPPLNTATVI 489
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++Y+WG GQLG + D P + ALD ++ +ACGG HT LT G +
Sbjct: 152 MSRNVYSWGRNDCGQLGLGHTNNKDS---PSLIEALDNQEVEFLACGGSHTALLTKDGLV 208
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYM 117
+ +G + GQLG + P LV V V +ACG HTL Y+
Sbjct: 209 FTFGAGKCGQLGHNSTQNELT-------------PCLVTELVGKRVTQIACGRRHTLAYV 255
Query: 118 RD-GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----------LAAGGGHSA 165
D GK+ +G GQ N + + P P+ E K + AGG S
Sbjct: 256 SDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFESHTSEKELIMIAGGNQSI 315
Query: 166 VL 167
+L
Sbjct: 316 LL 317
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG + GQLG + P+ V L G+ + ++ G H+ AL+ +Y+W
Sbjct: 102 ELFAWGQNTYGQLGVGRTFASTPT--PQIVEHLSGVPLVQISAGEAHSMALSMSRNVYSW 159
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG T ++ P L+ V+ +ACG SHT + +DG
Sbjct: 160 GRNDCGQLGLG-------------HTNNKDSPSLIEALDNQEVEFLACGGSHTALLTKDG 206
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
+ +G GQ + + P V VG+ V ++A G H+
Sbjct: 207 LVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHT 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R+F+ P I+
Sbjct: 84 IIQITCGDYHSLALSKGGELFAWGQNTYGQLGVG---RTFASTPTPQ--------IVEHL 132
Query: 101 NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
+GV LV + G +H++ ++ WG N GQ + PS ++ EV L
Sbjct: 133 SGVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFL 192
Query: 158 AAGGGHSAVLT 168
A GG H+A+LT
Sbjct: 193 ACGGSHTALLT 203
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 533 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 589
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 590 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 637
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 638 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 688
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 477 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 531
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 532 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 578
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 579 TLAVTENGQVWSWGDGDYGK 598
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 588 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 644
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 645 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 692
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 693 HSWGSNDQCQ 702
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 444 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 497
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 498 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 557
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 558 LVAGLKGLKVIDVACGSGDAQTL 580
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG QLG+ + G +L L G + +V+CG H+ ALT +G ++AW
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQGVSPILVS--TNLQGKRVTEVSCGSHHSLALTHEGEVFAW 152
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ+G G + P + +N I+ +ACG + ++ +G+++
Sbjct: 153 GYNNCGQVGSGSTANQPT--PRKVSNCLQNKVIVN-------IACGQTSSMAVTDNGEVY 203
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
GWGYN GQ + P + G V ++A+G HS LTD
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTD 250
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 34/195 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P R++AL G + +A G H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 258 GANTYGQLGTGNKSNQLS--PVQVMTEKERI--------VEIAACHSTHTSAAKTQSGQV 307
Query: 123 HGWGYNSYGQA---------ANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTDACS 172
+ WG GQA A+ +A + +P V W R L+ H LT A S
Sbjct: 308 YMWG-QCRGQAIVLPHLTHFASTDDVFACFATPSVMW-----RMLSM--EHDDFLTVAQS 359
Query: 173 LKELCEFRLAESVTL 187
LK+ EF E+ L
Sbjct: 360 LKK--EFDNPETSDL 372
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
++Y GL LG QS + P+++ L G + ++ G G H +T G LYA
Sbjct: 42 EVYVLGLNCSNCLGTGDSQS---TIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + S PILV N V V+CG H+L
Sbjct: 99 WGHNGYSQLGNGTTNQGVS-------------PILVSTNLQGKRVTEVSCGSHHSLALTH 145
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
+G++ WGYN+ GQ + + P V C+ + +A G S +TD
Sbjct: 146 EGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTD 198
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 562 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 618
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 619 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 666
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 717
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 506 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 560
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 561 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 607
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 608 TLAVTENGQVWSWGDGDYGK 627
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 617 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 674 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 722 HSWGSNDQCQ 731
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 473 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 526
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTL 609
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 45 ACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ 104
ACG +HT ALT +G +Y+WG C G LG G +P D P++ +
Sbjct: 4 ACGKLHTVALTEEGRVYSWG-CANGALGHG--NSKSQLLPKALDR-----PLIYSMPSIT 55
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGH 163
+ACG HTL +DG + WG N YGQ + P V+ ++ K AAGG H
Sbjct: 56 TIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQH 115
Query: 164 SAVLTDACSL-----KELCEFRLAESVTLSNASEIEDVASRTG 201
S VLT+A + + L V S A +I R+G
Sbjct: 116 SLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSG 158
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLGH ++ LPRRV AL+ A GG H+ LT +YA+G
Sbjct: 73 LWTWGRNQYGQLGHGDCKT---HKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFG 129
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + + +S P+ R +GV + CG+SH++ ++ +++
Sbjct: 130 SNVFGQLGLESKVK-YSAAPDIVSRLRR--------SGVCHITCGYSHSMALLKSEQLYS 180
Query: 125 WGYNSYGQ 132
WG N GQ
Sbjct: 181 WGRNDCGQ 188
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y +G GQLG L+S K P V L + + CG H+ AL LY+
Sbjct: 124 KVYAFGSNVFGQLG---LESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYS 180
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD--- 119
WG GQLGLG RS S +P E T F+ + VQ ++CG+ H + ++ +
Sbjct: 181 WGRNDCGQLGLG-HYRS-SPVP-EHLTMFKK-------SQVQQISCGYDHNIAFVSEYAG 230
Query: 120 ------GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACS 172
K++ WG GQ +++ P V + +R +AAGG SA + +A
Sbjct: 231 PGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQ 290
Query: 173 L 173
L
Sbjct: 291 L 291
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR---RVVALDGIFIKDVACGGVHTCALTSKGALY 61
+Y+WG + G LGH + +S +LLP+ R + I +ACG HT A+ G L+
Sbjct: 19 VYSWGCAN-GALGHGNSKS---QLLPKALDRPLIYSMPSITTIACGEFHTLAVGQDGTLW 74
Query: 62 AWGGCQAGQLGLGP-QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG Q GQLG G +T +P + + I I A G H+LV
Sbjct: 75 TWGRNQYGQLGHGDCKTHK---LPRRVEALEKKICI--------KAAAGGQHSLVLTEAN 123
Query: 121 KIHGWGYNSYGQAANE-KSTYAWYPSPVD 148
K++ +G N +GQ E K Y+ P V
Sbjct: 124 KVYAFGSNVFGQLGLESKVKYSAAPDIVS 152
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG G GQLGH L S +P+ V L I+ VA GG + A+ LY W
Sbjct: 238 KVYTWGRGEEGQLGHDELYS---RCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTW 294
Query: 64 GGCQAGQLGLG 74
G + GQLG G
Sbjct: 295 GCSREGQLGHG 305
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G+LGH + S D+ PR + AL G + D++CGG H+ +T LY W
Sbjct: 3461 DVYSWGEGDDGKLGHGNRNSCDR---PRVIEALRGKGVIDISCGGSHSACITQNHELYTW 3517
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G + D + + N V VACG + TL D
Sbjct: 3518 GKGRYGRLGHG----------DSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC 3567
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P V+ +G V K+ G S LT
Sbjct: 3568 VWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALT 3615
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD L P++V + + D+ACG T ALT G
Sbjct: 2581 ELYTWGLGEYGRLGH-----GDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGT 2635
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +PN + + GV VACG +L
Sbjct: 2636 VWSWGDGDFGKLGRG--GSEGCSVPNPVEK--------LQGQGVCKVACGAQFSLALSTS 2685
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG Y + + T+ P VD G ++ +A G H +TD+
Sbjct: 2686 GLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDS 2737
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + D P+ + ++D++CG H+ A+ S G LY WG
Sbjct: 2530 LFSWGEGEDGKLGHGNRMNCDH---PKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWG 2586
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G +S T R I I ACG + TL DG +
Sbjct: 2587 LGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDI----------ACGSRDAQTLALTDDGTV 2636
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG +G+ S P+PV+ G+ V K+A G S L+
Sbjct: 2637 WSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALS 2683
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH ++ P V L G + ++CG H+ A+TS+G LY W
Sbjct: 37 EVYSWGSGDGGKLGHGDTSPREE---PTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTW 93
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGH--SHTLVYMR 118
G G+LG G +P+LV + + VACG +HTL
Sbjct: 94 GRGNYGRLGHGSSEDQL-------------VPVLVSGLRGHHIIDVACGSGDAHTLAAAD 140
Query: 119 DGKIHGWGYNSYGQ 132
DG + WG YG+
Sbjct: 141 DGTVWSWGDGDYGK 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G +LGH + D P+ V ALDG + DV+ G +H ALT G +Y WG
Sbjct: 196 VWTWGKGEGFRLGH---GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 252
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVY 116
GQLG + D R P LV G+ +ACG + + +
Sbjct: 253 RNDQGQLG-------------DIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAW 294
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P +V +L G+ + V CG + ALT GA+Y WG
Sbjct: 3568 VWSWGDGDYGKLGR---GGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWG 3624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ +A G H + G++
Sbjct: 3625 KGDYYRLGHG------------VDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEV 3672
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + + P V G ++ ++A G H+
Sbjct: 3673 YTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHT 3715
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH D P+RV AL G + +A G +H A T G +Y WG
Sbjct: 3620 VYTWGKGDYYRLGH---GVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWG 3676
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G ++ R P LV + VACG +HT+ +
Sbjct: 3677 DNDEGQLGDG-----------TTNAIAR--PRLVTALQGKKISRVACGSAHTIAW 3718
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
++ G + G+LG L + +PR++ L ++ V+ GG H ALT +G L++
Sbjct: 2475 VFACGESTNGRLGLGPLSA--NVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 2532
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R P DT+ + V+ ++CG SH+ + G++
Sbjct: 2533 WGEGEDGKLGHG--NRMNCDHPKLIDTFKSSC--------VRDMSCGSSHSAAILSSGEL 2582
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 2583 YTWGLGEYGR 2592
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G +LGH + K P+ V L G I DVA G +H A+T G ++AWG
Sbjct: 2688 VWTWGKGDYYRLGHGNDTHVRK---PQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 2744
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-----LVACGHSHTLVY 116
GQ G N + T R P LV NG++ VACG SH++ +
Sbjct: 2745 DNDHGQQG------------NNTTTVNRR-PQLV--NGLEGQKITRVACGSSHSIAW 2786
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 17/176 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ ++ WGL QLG G K +P + + ++ +A G A++ G ++
Sbjct: 2420 QIKVFVWGLNDKDQLGGLK---GSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVF 2476
Query: 62 AWGGCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
A G G+LGLGP + + + I N S R + V G H +
Sbjct: 2477 ACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVS----------VHSGGRHAMALTI 2526
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+GK+ WG G+ + +P +D VR ++ G HSA + + L
Sbjct: 2527 EGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGEL 2582
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQ 104
G H ALT +G +Y+WG G+LG G DT R P LV V
Sbjct: 26 GKHFLALTREGEVYSWGSGDGGKLGHG-------------DTSPREEPTLVTGLAGKQVI 72
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 163
++CG +H+ +G+++ WG +YG+ + S P V G + +A G G
Sbjct: 73 RISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGD 132
Query: 164 SAVLTDA 170
+ L A
Sbjct: 133 AHTLAAA 139
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG G K P+ + L G+ + V CG + ALT G+++ WG
Sbjct: 144 VWSWGDGDYGKLGRGG-SDGCKN--PKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWG 200
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+ +LG G ++ + R+ ++ +G + V+ G H L G++
Sbjct: 201 KGEGFRLGHG------------TEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEV 248
Query: 123 HGWGYNSYGQ 132
+ WG N GQ
Sbjct: 249 YCWGRNDQGQ 258
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 3671 EVYTWGDNDEGQLGDGTTNAIAR---PRLVTALQGKKISRVACGSAHTI---------AW 3718
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
C+ G P +P E + + ++IP+ N + L+
Sbjct: 3719 STCKPVNAGRLPDE-----VPMEYN-HLQHIPLAATRNRLILL 3755
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG SL+ G K LP+ + AL I + G A+T++G +YA G
Sbjct: 3356 IYGWGHNHRGQLG--SLE-GAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATG 3412
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG S ES + VV V V G H + DG ++
Sbjct: 3413 YGHGGRLGLGGTDTVTSIKMLESLQH-------VVVRKVA-VHSGGKHAMALSADGDVYS 3464
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG G+ + P ++ G+ V ++ GG HSA +T
Sbjct: 3465 WGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACIT 3509
>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
Length = 1077
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +I++WG G G+LGH D P+ V +L+GI K VACG TCALT G +Y
Sbjct: 338 HGEIFSWGQGKCGRLGHKINMDLDH---PKLVDSLNGIAAKSVACGEYQTCALTKAGEVY 394
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G + ++P + + I I VACG HT V G+
Sbjct: 395 TWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISI-------SNVACGEWHTAVVSACGR 447
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+ +G ++G + P V+ G V+ +A G H+A + D
Sbjct: 448 LFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 496
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL---------- 54
++T+G G+ G LGH +L S + P+ V +L+G+ +K VACG HT A+
Sbjct: 448 LFTYGDGTFGALGHGNLISLSQ---PKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKF 504
Query: 55 -TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN---GVQLVACGH 110
++ G L+ WG G+LG G R +P V P V+CG
Sbjct: 505 KSAVGKLFTWGDGDKGKLGHGDNERKL-------------LPTCVAPLVDCDFAQVSCGR 551
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLT 168
T+ G+++ G + +GQ N S A + V+ + E V+ +++G H A LT
Sbjct: 552 MLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASV-AIVEGKLKEEFVKAISSGSYHVASLT 610
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G G+LGH +++LLP V L V+CG + T LT+ G +Y G
Sbjct: 511 LFTWGDGDKGKLGH---GDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMG 567
Query: 65 GCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG L + S + + + F V+ ++ G H G+++
Sbjct: 568 SSIHGQLGNLSSRDASVAIVEGKLKEEF-----------VKAISSGSYHVASLTSTGRVY 616
Query: 124 GWGYNSYGQ 132
WG ++GQ
Sbjct: 617 TWGKGAHGQ 625
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLG+ S + ++ + L F+K ++ G H +LTS G +Y WG
Sbjct: 563 VYTMGSSIHGQLGNLSSRDASVAIVEGK---LKEEFVKAISSGSYHVASLTSTGRVYTWG 619
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT 113
GQLGLG D+ RN+P V G V+ +ACG + T
Sbjct: 620 KGAHGQLGLG-------------DSDDRNLPTFVEALGDKQVESIACGSNFT 658
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
LLP+ + + + ++ ++ GG H +T G +++WG + G+LG ++
Sbjct: 309 LLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLG------------HKI 356
Query: 88 DTYFRNIPILVVPNGV--QLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN--EKSTYAWY 143
+ + ++ NG+ + VACG T + G+++ WG + +G + E S W
Sbjct: 357 NMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWL 416
Query: 144 PSPVDWCVG--EVRKLAAGGGHSAVLTDAC 171
P + + + +A G H+AV++ AC
Sbjct: 417 PQKLSGPLKGISISNVACGEWHTAVVS-AC 445
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT G+
Sbjct: 1991 ELYTWGLGEYGRLGH-----GDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGS 2045
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDT--PHEIER-LSGI-------GVIQIECGAQFSLALTRA 2095
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 2096 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 2147
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V L I+DVACG H+ A++S+G LY WG
Sbjct: 1940 VFSWGEGEDGKLGHGNRTTLDK---PRLVETLRSKKIRDVACGSSHSAAISSQGELYTWG 1996
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV V VACG + TL D
Sbjct: 1997 LGEYGRLGHG-------------DNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTED 2043
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 2044 GSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRA 2095
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 3084 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 3140
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 3141 GKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 3190
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 3191 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS 3240
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH Q K P+ + L G + VA G +H A+T G +YAW
Sbjct: 2097 EVWTWGKGDYYRLGHGGDQHVRK---PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 2153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
G GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 2154 GDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 2196
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 3047 ADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM---- 3102
Query: 82 FIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 3103 -------SYDR--PKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 3153
Query: 139 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 3154 EDQLRPQLVEALLGYRAIDIACGSGDAQTL 3183
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 3190 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTW 3246
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
+LG G S + R + G ++ +A G H + G+
Sbjct: 3247 SKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 3294
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 3295 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 1886 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 1942
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R+ P +T + ++ VACG SH+ G++
Sbjct: 1943 WGEGEDGKLGHG--NRTTLDKPRLVET--------LRSKKIRDVACGSSHSAAISSQGEL 1992
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 1993 YTWGLGEYGR 2002
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 2102
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 2103 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2150
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 2151 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 2193
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
++YTWG GQLG ++ + + PR V AL G I V CG HT AL++
Sbjct: 3294 EVYTWGDNDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 3343
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G + G +YA G
Sbjct: 1834 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACG 1890
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 1891 EGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVA------VHSGGKHALALTLDGKVFS 1942
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + T P V+ ++R +A G HSA ++ L
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGEL 1992
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 562 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 618
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 619 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 666
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 717
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 506 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 560
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 561 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 607
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 608 TLAVTENGQVWSWGDGDYGK 627
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 617 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 674 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 722 HSWGSNDQCQ 731
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 473 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 526
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTL 609
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNECGQLGLG-------------HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N GQ + PS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
>gi|357601928|gb|EHJ63196.1| hypothetical protein KGM_14591 [Danaus plexippus]
Length = 375
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G QLGH L + + LP V AL GI I + GG H+ AL+ G LY WG
Sbjct: 206 VYTWGNGRRLQLGHGDLTNLE---LPTEVEALAGIKIVKIRAGGWHSLALSDCGDLYLWG 262
Query: 65 GCQAGQLGL----GPQTRSFS--FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
GQLG+ G + + +P D Y N + V V+ +ACG HT + +
Sbjct: 263 WNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYDENDQL--VDLCVKDIACGTRHTALLLE 320
Query: 119 DGKIHGWGYNSYGQ 132
D + G N YGQ
Sbjct: 321 DNTVWTSGCNKYGQ 334
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 21/126 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVVALD------GIFIKDVACGGVHTC 52
D+Y WG GQLG + +K+ LP V D + +KD+ACG HT
Sbjct: 257 DLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYDENDQLVDLCVKDIACGTRHTA 316
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
L ++ G + GQLGL P+ +E F+ + G+ ++CG
Sbjct: 317 LLLEDNTVWTSGCNKYGQLGLPPER-------HEKIESFKKV---FYDEGITNISCGPWS 366
Query: 113 TLVYMR 118
T+V ++
Sbjct: 367 TVVELQ 372
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 35/147 (23%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
D+ CG H LT +G +Y WG + QLG G T +P E + G
Sbjct: 189 DIVCGYEHYMLLTDEGRVYTWGNGRRLQLGHGDLTN--LELPTEVEAL----------AG 236
Query: 103 VQLVA--CGHSHTLVYMRDGKIHGWGYNSYGQ------AANEKSTYAWYPSP-------- 146
+++V G H+L G ++ WG+N GQ EK Y P
Sbjct: 237 IKIVKIRAGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYDE 296
Query: 147 ----VDWCVGEVRKLAAGGGHSAVLTD 169
VD C V+ +A G H+A+L +
Sbjct: 297 NDQLVDLC---VKDIACGTRHTALLLE 320
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 80 FSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
F ++ +E + Y +P V V + CG+ H ++ +G+++ WG Q +
Sbjct: 160 FIYLTSEGNVYTGQLPSYVDTEHCFGKVCDIVCGYEHYMLLTDEGRVYTWGNGRRLQLGH 219
Query: 136 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
T P+ V+ G ++ K+ AGG HS L+D
Sbjct: 220 GDLTNLELPTEVEALAGIKIVKIRAGGWHSLALSD 254
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNECGQLGLG-------------HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 58/138 (42%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H+ G I+ WG N GQ + PS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G+ GQLGH S ++ L P V L + VA G H+ A S G+++ WG
Sbjct: 370 LWTWGHGATGQLGHGS---SERMLSPEVVTRLSNV--ASVASGSFHSVAALSDGSVWTWG 424
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G T R++P+ V + V + A GH H+ DG +
Sbjct: 425 RNTNGQLGDGTTTE-------------RHLPVRVPGLSGVVSVSASGH-HSFALRSDGTV 470
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GWG N+ GQ + + P+ V+ + V+ LA+GG H L
Sbjct: 471 WGWGRNAQGQMGDGTTKDRASPARVE-GLSSVKALASGGSHMVAL 514
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG + GQLG + +S P V L + VA HT AL S G ++AWG
Sbjct: 1125 VQTWGGNADGQLGDGTTES---RATPITVAGLGAMVA--VAPAARHTLALRSDGTVWAWG 1179
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G TR R +P+ VV V +A G H+L DG +
Sbjct: 1180 DNTFGQLGDGSNTR-------------RTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVW 1226
Query: 124 GWGYNSYGQ 132
WGYN +GQ
Sbjct: 1227 AWGYNVFGQ 1235
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + L P +V L G+ V G H AL S G ++AWG
Sbjct: 220 VWAWGANGSGQLGDGTYI---QRLAPTQVSQLQGV--SAVTAGLYHALALRSDGTVWAWG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQ+G G T S P + + R + VA + +LV + DG +
Sbjct: 275 SNSSGQMGDGTWTDRPS--PVQVTSIAR----------AKAVAAQDAGSLVLLDDGGVFA 322
Query: 125 WGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVL 167
WG NS GQ T A P PV +G V LAAG H+ VL
Sbjct: 323 WGLNSQGQLG--IGTTADSPLPVRVRGLGAVTSLAAGTQHAVVL 364
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL S GQLG + + LP RV L + +A G H L + G L+ WG
Sbjct: 320 VFAWGLNSQGQLG---IGTTADSPLPVRVRGLGAV--TSLAAGTQHAVVLRADGTLWTWG 374
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G R S E T N V VA G H++ + DG +
Sbjct: 375 HGATGQLGHGSSERMLS---PEVVTRLSN---------VASVASGSFHSVAALSDGSVWT 422
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+ GQ + +T P V G V ++A G HS L
Sbjct: 423 WGRNTNGQLGDGTTTERHLPVRVPGLSGVV-SVSASGHHSFAL 464
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ TWG GQLG L + LP +V L + ++ G H+ + + G + AWG
Sbjct: 720 LLTWGYNRFGQLG---LGAAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWG 774
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T S + RN+P + + G H+LV DG +
Sbjct: 775 QNTSGQLGDGSTTHRASPV------LARNLPC------ARAASAGRQHSLVLACDGTVWS 822
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG NS GQ + T YP+ V+ G V LA G
Sbjct: 823 WGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGG 858
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ+G S +V L G+ V G H+ AL G L AWG
Sbjct: 620 VWAWGDNTEGQMGDGSW---SDRFRAVQVYGLTGV--SSVVGGLYHSMALAQDGTLRAWG 674
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQ G G T +P L +G++L+ + H L DG +
Sbjct: 675 GNAYGQFGDGGVTPRV---------VAGAVPGL---SGIKLLGASYLHVLAVREDGMLLT 722
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WGYN +GQ + ++ P V +G+ R+L+AG HS
Sbjct: 723 WGYNRFGQLGLGAAGWSSLPVQVR-GLGQGRRLSAGRAHS 761
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG S + LP +VV L+ + +A G H+ A+ G ++AWG
Sbjct: 1175 VWAWGDNTFGQLGDGS---NTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWG 1229
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T +P ++ +G VA G H+L+ DG +
Sbjct: 1230 YNVFGQLGDG--TMDARAVPTR----------MLGLDGAVAVAGGEYHSLMLRFDGTLWA 1277
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
G NS+GQ T P V + +VR + AGG HS L +
Sbjct: 1278 TGNNSHGQLGEGTFTNRLSPFQVV-ELDQVRTVRAGGYHSVALRE 1321
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S+ + ++ ++V L + +A G H+ AL + ++ WG
Sbjct: 69 VWAWGGNGSGQLGTGSVSF--QRVVAQQVPGL--TDVTSIAAGDAHSLALRADRTVWTWG 124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AGQ+G G N + +P L + V VA G H+L DG +
Sbjct: 125 GNNAGQVGDGT---------NVDRPTPQKVPGL---SDVVAVAAGEFHSLALRADGTVWA 172
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG N YGQ S P+ V G V LAAG
Sbjct: 173 WGSNFYGQLGRGHSQPGPSPAQVVGLTGVV-ALAAG 207
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 45/181 (24%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG +L GD+ P V L GI G H ++ G ++AWG
Sbjct: 870 VWTWGANGSGQLGDGTL--GDRAS-PLEVKGLAGIATG--VMGEAHALVVSQDGTVWAWG 924
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPI------LVVPNG---------------- 102
GQLG G T S S + + N+ + V+P+G
Sbjct: 925 ANGRGQLGDGTTTSSASPVRVAGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDG 984
Query: 103 ----------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
V+ V G H + DG + GWG N++GQ + T+ W P
Sbjct: 985 TNVARTTPKPVQDLADVKAVTAGAHHVVAVRHDGTVWGWGANAFGQVGD--GTHFWRFRP 1042
Query: 147 V 147
V
Sbjct: 1043 V 1043
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ+G + + P RV L +K +A GG H AL + G ++ WG
Sbjct: 470 VWGWGRNAQGQMGDGTTK---DRASPARVEGLS--SVKALASGGSHMVALRTDGTVWTWG 524
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G T R P+ V +GV VA G +L DG +
Sbjct: 525 YNGAGQLGDGTTTD-------------RRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVW 571
Query: 124 GWGYNSYGQ 132
WG GQ
Sbjct: 572 AWGDGFEGQ 580
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG + S P +V L G+ V GG + L + G ++ WG
Sbjct: 820 VWSWGGNSQGQLGDGGVTS---RAYPAKVEGLWGVVA--VLAGGDSSMVLRADGTVWTWG 874
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G + S + + G+ G +H LV +DG +
Sbjct: 875 ANGSGQLGDG------TLGDRASPLEVKGLA------GIATGVMGEAHALVVSQDGTVWA 922
Query: 125 WGYNSYGQAANEKSTYAWYP 144
WG N GQ + +T + P
Sbjct: 923 WGANGRGQLGDGTTTSSASP 942
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG + GQ+G + + D+ P++V L + VA G H+ AL + G ++AWG
Sbjct: 120 VWTWGGNNAGQVGDGT--NVDRPT-PQKVPGLSDVVA--VAAGEFHSLALRADGTVWAWG 174
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G P S P VV GV +A G +L DG +
Sbjct: 175 SNFYGQLGRGHSQ------PGPS-------PAQVVGLTGVVALAAGFDFSLAVRSDGTVW 221
Query: 124 GWGYNSYGQ 132
WG N GQ
Sbjct: 222 AWGANGSGQ 230
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 1 MHLDIYTWGLG--SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+ D W G S GQLG + L P +VV LD ++ V GG H+ AL G
Sbjct: 1269 LRFDGTLWATGNNSHGQLGEGTFT---NRLSPFQVVELD--QVRTVRAGGYHSVALREDG 1323
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++ WG GQLG G T P +P L + V G SHT +
Sbjct: 1324 TVWTWGHNGQGQLGDGTVTTRRVPAP---------VPGLTA---IASVGAGTSHT--FAV 1369
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+ WG NS+GQ S+ P+ V G V+ + AGG
Sbjct: 1370 GSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG-VKSVLAGG 1411
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 7 TWGLGSVGQLGHC----SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+WG GQLG SL+ +L +V+ + V+ H AL + G +
Sbjct: 1072 SWGSHEYGQLGDAESGPSLEPVGVKLPSSKVL----VPAVSVSAWHQHAAALLADGTVQT 1127
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGK 121
WGG GQLG + T R PI V G + VA HTL DG
Sbjct: 1128 WGGNADGQLG-------------DGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGT 1174
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHS 164
+ WG N++GQ + +T P V VG +V +AAG HS
Sbjct: 1175 VWAWGDNTFGQLGDGSNTRRTLPVQV---VGLEKVTAIAAGSYHS 1216
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VA G H+ +T G ++AWGG +GQLG G S SF + +P L V
Sbjct: 53 VAAGAQHSLYVTQAGTVWAWGGNGSGQLGTG----SVSF----QRVVAQQVPGL---TDV 101
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
+A G +H+L D + WG N+ GQ + + P V + +V +AAG H
Sbjct: 102 TSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVP-GLSDVVAVAAGEFH 160
Query: 164 SAVL 167
S L
Sbjct: 161 SLAL 164
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLG + + P+ V L +K V G H A+ G ++ WG
Sbjct: 970 VWSWGANDSGQLGDGTNVA---RTTPKPVQDL--ADVKAVTAGAHHVVAVRHDGTVWGWG 1024
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQ+G G ++R P+ V + N V+ + G H+L + D +
Sbjct: 1025 ANAFGQVGDGTH-------------FWRFRPVRVEGLLNAVE-TSAGEQHSLALLGDERA 1070
Query: 123 HGWGYNSYGQAANEKS 138
WG + YGQ + +S
Sbjct: 1071 LSWGSHEYGQLGDAES 1086
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 25/130 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIF-IKDVACGGVHTCALTSKGALYA 62
++TWG GQLG D + RRV A + G+ I V G HT A+ S+ +A
Sbjct: 1325 VWTWGHNGQGQLG-------DGTVTTRRVPAPVPGLTAIASVGAGTSHTFAVGSE--TWA 1375
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG GQLG G D+ R P LV +GV+ V G ++ DG
Sbjct: 1376 WGRNSHGQLGTG-------------DSSDRLEPTLVKGLHGVKSVLAGGDFSVAQGADGS 1422
Query: 122 IHGWGYNSYG 131
WG N +G
Sbjct: 1423 AMSWGTNVHG 1432
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G GQLG + G + P +V L + H A+ G ++AWG
Sbjct: 570 VWAWGDGFEGQLGDGA---GVQRASPVQVTGLTRVVKLAAGA--AHGLAVRDDGTVWAWG 624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ+G G + SD FR + + + GV V G H++ +DG +
Sbjct: 625 DNTEGQMGDG----------SWSD-RFRAVQVYGL-TGVSSVVGGLYHSMALAQDGTLRA 672
Query: 125 WGYNSYGQ 132
WG N+YGQ
Sbjct: 673 WGGNAYGQ 680
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 79/210 (37%), Gaps = 47/210 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G LGH E P +V AL+ + I A GG H A+ +G YAW
Sbjct: 60 QLFTWGWNQRGTLGHPP--ESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAW 117
Query: 64 GGCQAGQLGLGPQT--------RSFSFIPNESDTYFR----------------------- 92
GG + GQ G P+ R IP R
Sbjct: 118 GGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWTW 177
Query: 93 -------NIPILVVP------NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+I + P VQL+A G H L + +G++ WG N YGQ +
Sbjct: 178 GQPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQ 237
Query: 140 YAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
P PV G + +AAGG HS LT
Sbjct: 238 PRSQPVPVQGLSGLILADIAAGGWHSTALT 267
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG Q + P V L G+ + D+A GG H+ ALT+ +YAW
Sbjct: 219 EVWAWGNNEYGQLGTGDTQPRSQ---PVPVQGLSGLILADIAAGGWHSTALTTDAEVYAW 275
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LG G +S +P + L+ + V+CG +H++ DG+I
Sbjct: 276 GRGEHGRLGFG-DDKSSKMVPQKVH--------LLAGETIAQVSCGGTHSVARTADGRIF 326
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G +G+ + +P V
Sbjct: 327 SYGRADHGRLGYGRKVTTGHPMEV 350
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG +S +++P++V L G I V+CGG H+ A T+ G ++++
Sbjct: 271 EVYAWGRGEHGRLGFGDDKS--SKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSY 328
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTL 114
G G+LG G + + P E R +G V+LVACG HTL
Sbjct: 329 GRADHGRLGYGRKVTTGH--PMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTL 380
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG +++ D + + +A G + V G ++ A+ G L+ WG
Sbjct: 7 VLAWGSGEDGQLGVGNMEDKDW-VCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWG 65
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P++++ S P + N+ I+ A G H L G+ +
Sbjct: 66 WNQRGTLGHPPESKTES-TPTQVKA-LENVKIV-------QAAIGGWHCLAVDDQGQAYA 116
Query: 125 WGYNSYGQAANEKSTYAWYPSPV---DWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E S V D + + VR++AAGG HS VLT
Sbjct: 117 WGGNEYGQCGEEPERKE-DGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLT 169
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNECGQLGLG-------------HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N GQ + PS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
>gi|115375506|ref|ZP_01462765.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115367461|gb|EAU66437.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 531
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG + + D+ + P+ V ++G+ VA H+ AL G ++AWG
Sbjct: 180 LYLWGRNNRGQLGLGAEVTADQRV-PKPVPGMEGV--AAVALNQNHSMALKEDGTVWAWG 236
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLGLG + P D R P V +G +A G+ H+LV M DG +
Sbjct: 237 ENAQGQLGLGKPPEAGQ--PRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVR 294
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV-----GEVRKLAAGGGHSAVL 167
+G NS GQ + + SP D+ V EV K+ AG HS L
Sbjct: 295 AFGDNSTGQLGDGTTE-----SPRDYPVLVGGLTEVVKVVAGSMHSVAL 338
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 46 CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
GG HT + +GALY WG GQLGLG + + +P + +P + GV
Sbjct: 167 AGGSHT-GVVRQGALYLWGRNNRGQLGLGAEVTADQRVP-------KPVPGM---EGVAA 215
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS-----------TYAWYPSPVDWCVGEV 154
VA +H++ DG + WG N+ GQ K T W P+ V+ G V
Sbjct: 216 VALNQNHSMALKEDGTVWAWGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAV 275
Query: 155 RKLAAGGGHSAVLTDACSLKELCE 178
LA G HS VL + +++ +
Sbjct: 276 -ALALGYRHSLVLMEDGTVRAFGD 298
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WGL + GQLG G++ P +V L + + V G + A + G L +WG
Sbjct: 396 VSSWGLDASGQLGFGEAIPGEQSNAPVQVKNL--VDARFVFANGNMSYAQRADGTLLSWG 453
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
GQLG G +T DT N+P+ G+ ++ G +H + + RDG +
Sbjct: 454 QNFNGQLGNGSKT----------DT---NVPVPAAEGLKGLLTLSPGATHVVAFHRDGSL 500
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPV 147
WG++ G E W Y P+
Sbjct: 501 FTWGWSFSGSLGREDLLDRWTYTEPI 526
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 14/160 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG + G LG + Q P +V + +G+ D+A G H L + G + +W
Sbjct: 344 VWVWGRNTYGNLGQGT-QDSTAHPTPAQVPGVANGV---DIATGRDHILVLHAGGTVSSW 399
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLG G IP E + LV + V + + DG +
Sbjct: 400 GLDASGQLGFG------EAIPGEQSNAPVQVKNLV---DARFVFANGNMSYAQRADGTLL 450
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
WG N GQ N T P P + + L+ G H
Sbjct: 451 SWGQNFNGQLGNGSKTDTNVPVPAAEGLKGLLTLSPGATH 490
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q P V LD + + D+A GG H+ ALT++G +Y WG
Sbjct: 217 LWAWGNNEYGQLGTGDTQP---RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + L+ + V+CG +H++ RDG+I
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN--------LLPGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 326 FGRGDHGR 333
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG G GQLG L + +++ L V AL+ ++ V G ++ A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q G LG P+T++ S P+ + N+ I+ A G H L G+ +
Sbjct: 64 WNQRGTLGHPPETKTES-TPSLVKS-LANVKIV-------QAAIGAWHCLAVDDQGRAYA 114
Query: 125 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLT 168
WG N YGQ E S P D + + VR++AAGG HS VLT
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 75/209 (35%), Gaps = 46/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LGH E P V +L + I A G H A+ +G YAWG
Sbjct: 59 LFTWGWNQRGTLGHPP--ETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWG 116
Query: 65 GCQAGQLGLGPQ-------TRSFSFIPNE------------------------------- 86
G + GQ G P R IP
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 87 ----SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D ++P+ V V+L+A G H L DG + WG N YGQ +
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPR 236
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
YP PV + +AAGG HS LT+
Sbjct: 237 SYPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K +LP++V L G I V+CGG H+ ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---------------VAC 108
G G+LG G + + + +PI + P + VAC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIHIPPPEGRFNHTDEEDDGKWIAKHVAC 377
Query: 109 GHSHTLVYM 117
G HTL +
Sbjct: 378 GGRHTLAIV 386
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G+ I D+ACGG H+ A+TS G LY WG
Sbjct: 4102 VYSWGEGDDGKLGHGNKVSYDR---PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH--SHTLVYMRDGK 121
+ G+LG G +SD R + + + V VACG + TL D
Sbjct: 4159 KGRYGRLGHG-----------DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 4207
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P +D G V K+ G S LT
Sbjct: 4208 VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALT 4255
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK P+ + L I+D+ACG H+ A+ S G LY WG
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDK---PKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWG 3176
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV + + V VACG + T+ D
Sbjct: 3177 LGEYGRLGHG-------------DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD 3223
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G ++ WG +G+ S + P VD
Sbjct: 3224 GYVYSWGDGDFGKLGRGGSDGCYTPLLVD 3252
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD + P+ V AL G + VACG T ALT+ G
Sbjct: 3171 ELYTWGLGEYGRLGH-----GDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGY 3225
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPN-GVQLVACGHSHTLVY 116
+Y+WG G+LG G ++ P+LV + N GV V CG +L
Sbjct: 3226 VYSWGDGDFGKLGRGGSDGCYT-------------PLLVDRLNNLGVIQVECGAQFSLAL 3272
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ G++ WG Y + + + P+ V+ G ++ +A G H +TD
Sbjct: 3273 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDT 3327
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S D+ L ++ + IFI ACG ++ AL++ G LY WG
Sbjct: 589 VYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFI---ACGSTYSAALSANGELYTWG 645
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
G+LG G N D + + + V VACG S TL G +
Sbjct: 646 RGNYGRLGHG----------NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIV 695
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG YG+ + + P VD + V K+ G SA LT
Sbjct: 696 FSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALT 742
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L I + V CG + ALT+ G +Y WG
Sbjct: 695 VFSWGDGDYGKLGRGGT---DGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWG 751
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
A +LG G +E + + + V+ ++ G +H L D ++G
Sbjct: 752 KGDAYRLGHG----------SEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYG 801
Query: 125 WGYNSYGQ 132
WG N YGQ
Sbjct: 802 WGRNDYGQ 809
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
IY+ G G+ G+LG + D ++P + ++ +FIK VA GG H AL+S+G +Y+
Sbjct: 4048 IYSTGYGAAGRLG---IGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYS 4104
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRD 119
WG G+LG G + +Y R P L+ GV++V ACG H+
Sbjct: 4105 WGEGDDGKLGHGNKV-----------SYDR--PKLIEDLLGVEIVDIACGGHHSAAITSA 4151
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG YG+ + S P V+ +V +A G G + L
Sbjct: 4152 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTL 4200
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PR+V AL G I +A G +H A + KG ++ WG
Sbjct: 4260 VYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 4316
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T + P LV + VACG +HTL +
Sbjct: 4317 DNDEGQLGDG-------------TTSALHRPRLVHALQGKKITRVACGSAHTLAW 4358
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D + P V L G + VACG T +T+ G ++
Sbjct: 640 ELYTWGRGNYGRLGHGNF---DDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 696
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D +I ++ V G Q A +H G+
Sbjct: 697 SWGDGDYGKLGRGGTDGSKT--PKIVDKLL-DINVVKVFCGSQFSAALTAH-------GE 746
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +V+ L+ G H LT+
Sbjct: 747 VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTE 795
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4207 NVWSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTW 4263
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 4264 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4311
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4312 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHT 4355
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P+ + L IK VA GG H ALT G +++
Sbjct: 3066 LYACGEGTNGRLG---LGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G + + P L+ ++ +ACG H+ +
Sbjct: 3123 WGEGEDGKLGHG-------------NCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASN 3169
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 160
G+++ WG YG+ + + P V +G V ++A G
Sbjct: 3170 GELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACG 3211
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G I VA G +H A+T G +YAW
Sbjct: 3277 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3333
Query: 64 GGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G + R S + + D V V+CG SH++ ++
Sbjct: 3334 GDNDHGQQGNGTTSVNRKPSLVHDLEDAR------------VNRVSCGSSHSIAWV 3377
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL QLG G K LP L + +A G ++ +G LYA G
Sbjct: 3014 VYVWGLNDKDQLGGLK---GSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3070
Query: 65 GCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG IP S + + V G H L +DGK+
Sbjct: 3071 EGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVA----------VHSGGKHALALTQDGKV 3120
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + P ++ + +R +A G GHSA +
Sbjct: 3121 FSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAI 3166
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K LP +L + +A G A+T+ G +Y+ G
Sbjct: 3996 IYGWGHNHRGQLGGLE---GPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTG 4052
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AG+LG+G T S IP T +I + + V+ G H + +G ++
Sbjct: 4053 YGAAGRLGIG-GTDSV-MIP----TLLESIQHVFIKKVA--VSSGGKHCIALSSEGHVYS 4104
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG G+ + P ++ +G E+ +A GG HSA +T A
Sbjct: 4105 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSA 4151
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++YTWG G +LGH S + P+ + +L +KD++ G H ALT +Y
Sbjct: 744 HGEVYTWGKGDAYRLGH---GSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVY 800
Query: 62 AWGGCQAGQLG--LGPQTRSFSFIPNES 87
WG GQ+ LGP + P S
Sbjct: 801 GWGRNDYGQIDPTLGPIISEPTLCPTLS 828
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P+RV I +A G H ALT G +Y+WG G+LG G
Sbjct: 551 GSETQYPQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHG------- 603
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
DT + P L+ + + +ACG +++ +G+++ WG +YG+ +
Sbjct: 604 ------DTISYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNF 657
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 658 DDVMTPTLVTTLKGHTVVHVACGSGDSQTL 687
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 4311 EVFTWGDNDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHT---------LAW 4358
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILV 98
+A Q + T + + + S + RN +L+
Sbjct: 4359 STAKATQSRMPASTPMEYDLVKDLSYSVLRNRLVLL 4394
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH + S D+ P+ + L G+ I D+ACGG H+ A+TS G LY WG
Sbjct: 35 VYSWGEGDDGKLGHGNKVSYDR---PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 91
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH--SHTLVYMRDGK 121
+ G+LG G +SD R + + + V VACG + TL D
Sbjct: 92 KGRYGRLGHG-----------DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN 140
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG YG+ S P +D G V K+ G S LT
Sbjct: 141 VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALT 188
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D PR+V AL G I +A G +H A + KG ++ WG
Sbjct: 193 VYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 249
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
GQLG G S + + + + VACG +HTL +
Sbjct: 250 DNDEGQLGDG----------TTSALHRPRLVHALQGKKITRVACGSAHTLAW 291
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 140 NVWSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTW 196
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G +D + R + G ++ +A G H + G+
Sbjct: 197 GKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 244
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 245 VFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHT 288
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
++P + ++ +FIK VA GG H AL+S+G +Y+WG G+LG G +
Sbjct: 1 MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKV-------- 52
Query: 86 ESDTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
+Y R P L+ GV++V ACG H+ G ++ WG YG+ + S
Sbjct: 53 ---SYDR--PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL 107
Query: 143 YPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +V +A G G + L
Sbjct: 108 RPKVVEALQDYKVIDVACGSGDAQTL 133
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG + + + PR V AL G I VACG HT AW
Sbjct: 244 EVFTWGDNDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHTL---------AW 291
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILV 98
+A Q + T + + + S + RN +L+
Sbjct: 292 STAKATQSRMPASTPMEYDLVKDLSYSVLRNRLVLL 327
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNECGQLGLG-------------HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N GQ + PS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S DK P+ + L I+D+ACG H+ A+ S G LY WG
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDK---PKLIEILKSKRIRDIACGSGHSAAIASNGELYTWG 2753
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRD 119
+ G+LG G DT + P LV V V VACG + T+ D
Sbjct: 2754 LGEYGRLGHG-------------DTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTD 2800
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G ++ WG +G+ S + P VD G V ++ G S LT
Sbjct: 2801 GCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALT 2850
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH S D+ L ++ + +FI ACG ++ AL++ G LY WG
Sbjct: 168 VYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFI---ACGSTYSAALSASGELYTWG 224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
G+LG G N D + + + V VACG S TL G +
Sbjct: 225 RGNYGRLGHG----------NFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIV 274
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG YG+ + + P VD + V K+ GG SA LT
Sbjct: 275 FSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALT 321
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD + P+ V AL G + VACG T ALT+ G
Sbjct: 2748 ELYTWGLGEYGRLGH-----GDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGC 2802
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y+WG G+LG G ++ + + GV V CG +L +
Sbjct: 2803 VYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGL----------GVIQVECGAQFSLALTKY 2852
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G++ WG Y + + + P+ V+ G ++ +A G H +TD
Sbjct: 2853 GEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 2903
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L I + V CGG + ALT+ G +Y WG
Sbjct: 274 VFSWGDGDYGKLGRGGT---DGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWG 330
Query: 65 GCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
A +LG G + R I + D +++ + G +H L D +
Sbjct: 331 KGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSV------------GTTHILALTEDQFV 378
Query: 123 HGWGYNSYGQ 132
+GWG N YGQ
Sbjct: 379 YGWGRNDYGQ 388
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D P V L+G+ + V CG + ALT G ++ WG
Sbjct: 2803 VYSWGDGDFGKLGRGG---SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWG 2859
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R ++ G ++ VA G H L G++
Sbjct: 2860 KGDYFRLGHG------------NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 2907
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSA--VLTDACS 172
+ WG N +GQ N ++ PS V D V +++ G HS VL D S
Sbjct: 2908 YAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQPS 2960
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH + D L P V L G + VACG T +T+ G ++
Sbjct: 219 ELYTWGRGNYGRLGHGNF---DDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 275
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G S + P D +I ++ V G Q A +H G+
Sbjct: 276 SWGDGDYGKLGRGGTDGSKT--PKIVDKLL-DINVVKVFCGGQFSAALTAH-------GE 325
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTD 169
++ WG + + + YP ++ +++ L+ G H LT+
Sbjct: 326 VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTE 374
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P+ + L IK VA GG H ALT G +++
Sbjct: 2643 LYACGEGTNGRLG---LGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 2699
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G + I + ++ ++ +ACG H+ +G++
Sbjct: 2700 WGEGEDGKLGHG------NCISLDKPKLIE----ILKSKRIRDIACGSGHSAAIASNGEL 2749
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS---AVLTDAC 171
+ WG YG+ + + P V VG+ V ++A G + A+ TD C
Sbjct: 2750 YTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGC 2802
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + K P V L G I VA G +H A+T G +YAW
Sbjct: 2854 EVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 2910
Query: 64 GGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G GQ G G + R S + + D V V+CG SH++ ++
Sbjct: 2911 GDNDHGQQGNGATSVNRKPSLVHDLEDAR------------VNRVSCGSSHSIAWV 2954
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 16/166 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WGL QLG G K LP L + +A G ++ +G LYA G
Sbjct: 2591 VYVWGLNDKDQLGGLK---GSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 2647
Query: 65 GCQAGQLGLGPQTR--SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG IP S + + V G H L +DGK+
Sbjct: 2648 EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVA----------VHSGGKHALALTQDGKV 2697
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
WG G+ + P ++ + +R +A G GHSA +
Sbjct: 2698 FSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAI 2743
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++YTWG G +LGH S + P+ + +L IKD++ G H ALT +Y
Sbjct: 323 HGEVYTWGKGDAYRLGHGS---EEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVY 379
Query: 62 AWGGCQAGQLG--LGPQTRSFSFIPNES 87
WG GQ+ LGP + P S
Sbjct: 380 GWGRNDYGQIDPTLGPVVSEPTLCPTLS 407
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 24 GDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
G + P RV I +A G H ALT G +Y+WG G+LG G
Sbjct: 130 GSETQYPLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHG------- 182
Query: 82 FIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
DT + P L+ + + +ACG +++ G+++ WG +YG+ +
Sbjct: 183 ------DTVSYDEPKLIESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNF 236
Query: 139 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 167
P+ V G V +A G G S L
Sbjct: 237 DDVLTPTLVTTLKGHTVVHVACGSGDSQTL 266
>gi|146295924|ref|YP_001179695.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409500|gb|ABP66504.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 730
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WGL GQLG+ + +K P +++ +KDVA G + A+T G LY W
Sbjct: 155 DLYAWGLNDRGQLGNGTRVDCNK---PIKIMT----NVKDVAAGWYTSFAITKNGDLYGW 207
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + P+ ++ +GVQ V+ G +H L + G+++
Sbjct: 208 GANEVGQLGDGSKIDKIK-------------PVKIM-SGVQSVSAGSNHVLALTKKGELY 253
Query: 124 GWGYNS 129
WGYN+
Sbjct: 254 AWGYNN 259
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG G KE V L + +A G H+ A+T G LYAW
Sbjct: 107 NLYCWGNNEYGQLG-----DGTKESKTTPVKILGNVVA--IAAGNYHSLAVTKNGDLYAW 159
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + N PI ++ N V+ VA G + ++G ++
Sbjct: 160 GLNDRGQLGNGTRVDC-------------NKPIKIMTN-VKDVAAGWYTSFAITKNGDLY 205
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
GWG N GQ + P + + V+ ++AG H LT
Sbjct: 206 GWGANEVGQLGDGSKIDKIKPVKI---MSGVQSVSAGSNHVLALT 247
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG VGQLG G K + V + G+ + V+ G H ALT KG LYAW
Sbjct: 203 DLYGWGANEVGQLG-----DGSKIDKIKPVKIMSGV--QSVSAGSNHVLALTKKGELYAW 255
Query: 64 GGCQAGQLGLGPQ-TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G +LG P ++FS P + F++I G+ + G S++L+ ++G +
Sbjct: 256 GYNNDSELGFDPGWGKNFSEKPVRVN--FKDI------KGISYIYAGESYSLLIDKNGVL 307
Query: 123 HGWG 126
G G
Sbjct: 308 WGLG 311
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 28/132 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y W LG +L+S LP +V+ +K G H A+ G LY W
Sbjct: 66 ELYEWELGG-------TLES---RYLPTKVME----HVKIAKAGWAHVLAIDQSGNLYCW 111
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + ES T P+ ++ N V +A G+ H+L ++G ++
Sbjct: 112 GNNEYGQLGDGTK---------ESKT----TPVKILGN-VVAIAAGNYHSLAVTKNGDLY 157
Query: 124 GWGYNSYGQAAN 135
WG N GQ N
Sbjct: 158 AWGLNDRGQLGN 169
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 95 PILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 154
P+L++ N V L + G H+L +DGK++GWG NSY Q N P+ +D VGE+
Sbjct: 380 PVLIMKN-VSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNGTKNPLCRPTKIDINVGEI 438
Query: 155 RKLAAGGGHSAVL 167
+ AG S ++
Sbjct: 439 IGILAGTQRSFLI 451
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+K VA G + ALT G +YAWG G LG ++D+++ P+ V
Sbjct: 636 VKMVAAGANRSFALTKNGEVYAWG-FNLGTLG------------TDTDSWYEPRPVKVF- 681
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
G ++C H L R+G ++GWG NS GQ
Sbjct: 682 EGAVWISCKGGHVLALTREGDLYGWGDNSLGQ 713
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQA-GQLGLGPQTRSFSFIPNESDTYFR-NIPILV 98
+ +A G H A+T G+LYAWG A G++G G IPN R + P+ V
Sbjct: 584 VVSMASGYDHCLAVTKDGSLYAWGSDPAHGEIGNGIA------IPN-----LRIDKPVKV 632
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVGEVRKL 157
+ N V++VA G + + ++G+++ WG+N G + T +WY P PV G V +
Sbjct: 633 MDN-VKMVAAGANRSFALTKNGEVYAWGFN-LGTLGTD--TDSWYEPRPVKVFEGAVW-I 687
Query: 158 AAGGGHSAVLT 168
+ GGH LT
Sbjct: 688 SCKGGHVLALT 698
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 24/125 (19%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V GG A+T G LY W +LG ++R ++P + V V
Sbjct: 51 VDTGGNQNLAITENGELYEW------ELGGTLESR---YLPTK------------VMEHV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
++ G +H L + G ++ WG N YGQ + P + +G V +AAG H
Sbjct: 90 KIAKAGWAHVLAIDQSGNLYCWGNNEYGQLGDGTKESKTTPVKI---LGNVVAIAAGNYH 146
Query: 164 SAVLT 168
S +T
Sbjct: 147 SLAVT 151
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG ++G LG D PR V +G ++C G H ALT +G LY W
Sbjct: 654 EVYAWGF-NLGTLG----TDTDSWYEPRPVKVFEGAVW--ISCKGGHVLALTREGDLYGW 706
Query: 64 GGCQAGQL 71
G GQ+
Sbjct: 707 GDNSLGQV 714
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G GQLG + + + L V L G + DVAC HT + G L+A G
Sbjct: 141 LYTVGFNMRGQLGLGTATTVTEATL---VEELAGKRVVDVACSYFHTAIVMDNGDLHACG 197
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G S +P D +FR+ P+L VACG +T+ +RDG +
Sbjct: 198 CNDYGQLGMG--DHSGHLVPRPVDYFFRH-PVLA-------VACGQHYTVASLRDGGVVA 247
Query: 125 WGYNSYGQAANEK-STYAWYPS----PVDWCVGEVRKLAAGGGHSAVLTD 169
+G N +GQ ++ S P+ P+D V V +L+ G H+A++T+
Sbjct: 248 FGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAV--VPQLSCGYHHTAIVTE 295
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +G GQLG + + LLP R+ LD + ++CG HT +T GA+Y +
Sbjct: 245 VVAFGKNDHGQLGLDRVS--EPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTF 302
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG + P ES + R + VACG HTL DGK+
Sbjct: 303 GRNDYGQLGLGHKLHMARPTPVESLSRMR----------ITQVACGCYHTLALSDDGKVF 352
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G N++GQ E S P + + +AAG HS L
Sbjct: 353 PFGRNNHGQLGLETSMDCLSPQLISTLRN--KPVAAGFYHSVCL 394
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 46/120 (38%), Gaps = 10/120 (8%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
G H AL + G LY G GQLGLG T E R V V
Sbjct: 128 GSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKR----------VVDV 177
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 166
AC + HT + M +G +H G N YGQ + P PVD+ A G H V
Sbjct: 178 ACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTV 237
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + S ++ PR + +L G + DVACGG H+ +T+ G LY W
Sbjct: 688 EVYSWGEGDDGKLGHGNKSSCER---PRVIESLRGKEVVDVACGGAHSACITASGELYTW 744
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGH--SHTLVYMRDG 120
G + G+LG G +SD R + + V+ VACG + TL D
Sbjct: 745 GKGRYGRLGHG-----------DSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDD 793
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P VD G V ++ G S LT + S+
Sbjct: 794 CVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSV 847
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH + D P+RV AL G + +A G +H A T G +Y WG
Sbjct: 847 VYTWGKGDYHRLGH---GTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWG 903
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G + + I + P LV + V+CG +HT+ +
Sbjct: 904 DNDEGQLGDG----TVNAI---------HKPRLVAALQGKKINRVSCGSAHTVAW 945
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + +L +FIK V GG H AL+++G +Y+WG G+LG G N+S
Sbjct: 657 PTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHG----------NKS 706
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ + V VACG +H+ G+++ WG YG+ + S P V
Sbjct: 707 SCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKV 766
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G VR +A G G + L
Sbjct: 767 EALSGWRVRCVACGSGDAQTL 787
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P RV L G+ + V CG + ALT+ G++Y WG
Sbjct: 795 VWSWGDGDYGKLGR---GGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWG 851
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G +D + R + G ++ +A G H + G++
Sbjct: 852 KGDYHRLGHG------------TDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEV 899
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + P V G ++ +++ G H+
Sbjct: 900 YTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHT 942
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG ++ + K PR V AL G I V+CG HT AW
Sbjct: 898 EVYTWGDNDEGQLGDGTVNAIHK---PRLVAALQGKKINRVSCGSAHTV---------AW 945
Query: 64 GGCQ---AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV 106
C AG G P +P E D R+IPI + N L+
Sbjct: 946 STCNPSTAGACGRMPPA-----VPLEYD-LLRDIPIPTLRNRYALL 985
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G GS G LG + D E+ P+R+ L I ++ G H+ T KG L++W
Sbjct: 96 DLYSMGKGSYGVLG-LDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKG-LFSW 153
Query: 64 GGCQAGQLGLGPQTRSFS----------FIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
G GQL G FI N SD+ FRNI + V G H+
Sbjct: 154 GRSDKGQLANGELKSEIKDQINYSSKPQFIKN-SDSTFRNI---------KKVCSGSDHS 203
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLT 168
LV +DG ++ WG+ +G K P+ + + KL A GG HS +LT
Sbjct: 204 LVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILT 262
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGALY 61
+Y+WG G G G L D P ++ L+ + D+ACGG H+ LTS +Y
Sbjct: 212 VYSWGHGYFGATG---LGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDNEIY 268
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
++G + GQLG + P + ++ + I V A H+ + G
Sbjct: 269 SFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSV------FAGSHATSFYVDEKGD 322
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ WG+ G + + P+ V + ++K+AAG H+ LT+
Sbjct: 323 VYSWGWGEGGTLGFGDNQNVYVPTQVK-SLSNIKKIAAGFKHTLALTN 369
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-IFIKDVACGGVHTC-ALTSKGALY 61
+IY++G G GQLGH + + P+++ +++ IK V G T + KG +Y
Sbjct: 266 EIYSFGWGEYGQLGHSENDTKNY-YSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVY 324
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDG 120
+WG + G LG G + +P V + ++ +A G HTL D
Sbjct: 325 SWGWGEGGTLGFGDNQNVY-------------VPTQVKSLSNIKKIAAGFKHTLALTNDN 371
Query: 121 KIHGWGYNSYGQAANEKST 139
+++ +G N++GQ ++++
Sbjct: 372 QVYVFGDNTFGQLGSKQNN 390
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG G G LG Q+ +P +V +L I K +A G HT ALT+ +Y +
Sbjct: 322 DVYSWGWGEGGTLGFGDNQN---VYVPTQVKSLSNI--KKIAAGFKHTLALTNDNQVYVF 376
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNI 94
G GQLG Q F N++ NI
Sbjct: 377 GDNTFGQLG-SKQNNVFEDPQNDNQDDSNNI 406
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 20/135 (14%)
Query: 45 ACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ 104
+ GG LT LY+ G G LGL + + P + I L N +
Sbjct: 82 SLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEP-------KRIETLKNRNIIS 134
Query: 105 LVACGHSHTLVYMRDGKIHGWGYNSYGQAAN--------EKSTYAWYPSPV---DWCVGE 153
L + G+ H++V D + WG + GQ AN ++ Y+ P + D
Sbjct: 135 L-SSGYEHSIV-TTDKGLFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRN 192
Query: 154 VRKLAAGGGHSAVLT 168
++K+ +G HS VL
Sbjct: 193 IKKVCSGSDHSLVLN 207
>gi|310818131|ref|YP_003950489.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309391203|gb|ADO68662.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 512
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG + + D+ + P+ V ++G+ VA H+ AL G ++AWG
Sbjct: 161 LYLWGRNNRGQLGLGAEVTADQRV-PKPVPGMEGV--AAVALNQNHSMALKEDGTVWAWG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLGLG + P D R P V +G +A G+ H+LV M DG +
Sbjct: 218 ENAQGQLGLGKPPEAGQ--PRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVR 275
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV-----GEVRKLAAGGGHSAVL 167
+G NS GQ + + SP D+ V EV K+ AG HS L
Sbjct: 276 AFGDNSTGQLGDGTTE-----SPRDYPVLVGGLTEVVKVVAGSMHSVAL 319
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 46 CGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
GG HT + +GALY WG GQLGLG + + +P + +P + GV
Sbjct: 148 AGGSHT-GVVRQGALYLWGRNNRGQLGLGAEVTADQRVP-------KPVPGM---EGVAA 196
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS-----------TYAWYPSPVDWCVGEV 154
VA +H++ DG + WG N+ GQ K T W P+ V+ G V
Sbjct: 197 VALNQNHSMALKEDGTVWAWGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAV 256
Query: 155 RKLAAGGGHSAVLTDACSLKELCE 178
LA G HS VL + +++ +
Sbjct: 257 -ALALGYRHSLVLMEDGTVRAFGD 279
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WGL + GQLG G++ P +V L + + V G + A + G L +WG
Sbjct: 377 VSSWGLDASGQLGFGEAIPGEQSNAPVQVKNL--VDARFVFANGNMSYAQRADGTLLSWG 434
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGKI 122
GQLG G +T DT N+P+ G+ ++ G +H + + RDG +
Sbjct: 435 QNFNGQLGNGSKT----------DT---NVPVPAAEGLKGLLTLSPGATHVVAFHRDGSL 481
Query: 123 HGWGYNSYGQAANEKSTYAW-YPSPV 147
WG++ G E W Y P+
Sbjct: 482 FTWGWSFSGSLGREDLLDRWTYTEPI 507
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 14/160 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG + G LG + Q P +V + +G+ D+A G H L + G + +W
Sbjct: 325 VWVWGRNTYGNLGQGT-QDSTAHPTPAQVPGVANGV---DIATGRDHILVLHAGGTVSSW 380
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +GQLG G IP E + LV + V + + DG +
Sbjct: 381 GLDASGQLGFG------EAIPGEQSNAPVQVKNLV---DARFVFANGNMSYAQRADGTLL 431
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
WG N GQ N T P P + + L+ G H
Sbjct: 432 SWGQNFNGQLGNGSKTDTNVPVPAAEGLKGLLTLSPGATH 471
>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1294
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GS GQLG+ S +S P R+V+ + FI+ V CG HT L K Y
Sbjct: 132 EVYGWGDGSYGQLGNGSQES---RFAPTRIVSENNEFIQ-VQCGSRHTILLDLKKKAYVC 187
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGL T+ FI + F ACG H+L+ G+++
Sbjct: 188 GSNENGQLGL-RSTKIELFIKKLDNKGFIE------------AACGQFHSLLLDEQGRVY 234
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G NS+GQ + + ++ GE A G HSA L
Sbjct: 235 STGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAGSHSAAL 278
Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 14 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
GQLG G +P+ + + I+ V+CG H+ +T +G +Y G + G+LG+
Sbjct: 35 GQLGLGHKHQGKNYTIPK--ICCYNLIIRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGI 92
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
++ + S P + I L + +CG SHT+ M++G+++GWG SYGQ
Sbjct: 93 STKSITSSSTPCLVED-LSKIKCLSL-------SCGQSHTIAVMQNGEVYGWGDGSYGQL 144
Query: 134 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
N + P+ + E ++ G H+ +L
Sbjct: 145 GNGSQESRFAPTRIVSENNEFIQVQCGSRHTILL 178
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
Y G GQLG L+S EL ++ LD + ACG H+ L +G +Y+ G
Sbjct: 185 YVCGSNENGQLG---LRSTKIELFIKK---LDNKGFIEAACGQFHSLLLDEQGRVYSTGA 238
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKIH 123
GQLG+G + + F S G Q+V A G SH+ + G+++
Sbjct: 239 NSFGQLGIGTKNNQYEFTQINS------------LEGEQIVKIAAG-SHSAALNKKGEMY 285
Query: 124 GWGYNSYGQ 132
WG +G+
Sbjct: 286 IWGTGVFGE 294
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3862
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 3863 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3909
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 3910 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3962
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 54/214 (25%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 2868 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2922
Query: 60 LYAWGGCQAGQLGLGPQTR-----------------------SFSFIPNE---------- 86
+++ G ++G GP+ + FS +
Sbjct: 2923 VFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2982
Query: 87 --------SDTYFRNIPILVVPNGVQLVAC---GHSHTLVYMRDGKIHGWGYNSYGQAAN 135
SD + R ++ G ++VAC G H L G+++ WG N +GQ N
Sbjct: 2983 DYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGN 3042
Query: 136 EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3043 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3076
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S +PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 2821 VFSWGEGDDGKLGHFSR-------MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2873
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 2874 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 2923
Query: 123 HGWG 126
G
Sbjct: 2924 FSLG 2927
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 3913 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3969
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 3970 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4011
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4012 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4060
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 3965 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4022 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4063
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 3832
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 3833 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 3884
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 3885 EALQGHRVVDIACGSGDAQTL 3905
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 28/167 (16%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGG 65
WGLG + SG + + AL +K VA G T G +++WG
Sbjct: 2776 WGLG---------ISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGE 2826
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG FS +P R I L ++ +ACG SH+ G+++ W
Sbjct: 2827 GDDGKLG------HFSRMP-------RLIEALKTKR-IRDIACGSSHSAALTSSGELYTW 2872
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG--GHSAVLTD 169
G YG+ + +T P V +G V ++A G + LTD
Sbjct: 2873 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2919
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4016 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4063
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4064 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4091
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3701 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 3756
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 3757 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 3809
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 3810 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 3859
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +G GQLG + + + +L P +V L+ ++ CG HT AL S L+A+G
Sbjct: 777 FAFGKNDYGQLG---IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFG 833
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
GQLGLG S + F N ++ G +V ACG HT+ +G +
Sbjct: 834 RNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVM 893
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G N++GQ +T YP P+D VG+ V +AAG H+ VLT
Sbjct: 894 YVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH S D+++ P+ V AL I VACG HT +T+ G +A+
Sbjct: 723 NLYTFGRNDYGQLGHND--SIDRKI-PQFVEALSDQQIVSVACGQYHTMVVTASGKAFAF 779
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-----VACGHSHTLVYMR 118
G GQLG+ DT + + V G++ + CG+ HT+
Sbjct: 780 GKNDYGQLGI--------------DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCS 825
Query: 119 DGKIHGWGYNSYGQ 132
+ +G N YGQ
Sbjct: 826 GAHLFAFGRNDYGQ 839
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG---ALY 61
+ T G GQLGH + S E +P+ + +L+ ++ V+C HT G LY
Sbjct: 669 VATCGYNYRGQLGHGNTTS---ESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLY 725
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+G GQLG +D+ R IP V + VACG HT+V
Sbjct: 726 TFGRNDYGQLG-------------HNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTA 772
Query: 119 DGKIHGWGYNSYGQ 132
GK +G N YGQ
Sbjct: 773 SGKAFAFGKNDYGQ 786
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++ G S G+LGH S R+ AL I + G HT LT+ G ++
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 619
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ G G R ++ IP + + G HT++ DG++
Sbjct: 620 GYNDNGQCGQGGTARV---------SHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 670
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GYN GQ + +T P + ++ +L + + VL
Sbjct: 671 TCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVL 714
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLGH ++ D +P+ + +L G ACG HT ALT G++YA+G
Sbjct: 162 LWSWGRNDKGQLGHGDIKRID---VPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG +T + +P+ + + PI VACG +++ G ++
Sbjct: 219 ENKMGQLGLGNKTDA---VPSPAQILYNGQPITK-------VACGAEFSMIMDCKGNLYS 268
Query: 125 WGYNSYGQ 132
+G YGQ
Sbjct: 269 FGCPEYGQ 276
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L G+ ++ VA G H+ +T +G L++WG GQLG G
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG------------- 176
Query: 88 DTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
D ++P L+ G V ACG +HTL +G ++ +G N GQ T A P
Sbjct: 177 DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VP 235
Query: 145 SPVDWCVG--EVRKLAAGGGHSAVL 167
SP + K+A G S ++
Sbjct: 236 SPAQILYNGQPITKVACGAEFSMIM 260
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G +GQLG + D P +++ +G I VACG + + KG LY++G
Sbjct: 214 VYAFGENKMGQLGLGN--KTDAVPSPAQIL-YNGQPITKVACGAEFSMIMDCKGNLYSFG 270
Query: 65 GCQAGQLGL---GPQTRSFSFIPNESDTYFRNIPILV----------VPN-GVQLVACGH 110
+ GQLG G I + + R I I + VPN V+ +ACG
Sbjct: 271 CPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGI 330
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+H+L+ ++ WG+ YG+
Sbjct: 331 NHSLILDSQKRVFSWGFGGYGR 352
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+ RR+ + + + ++
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVR 324
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
D+ACG H+ L S+ +++WG G+LG Q +P R + + P
Sbjct: 325 DIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--EMVP-------RLVKLFDFPGR 375
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + G + + G + WG A N YP V D C +VR LA G
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACG 429
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 430 KSSIIVAADESTI 442
>gi|300175557|emb|CBK20868.2| unnamed protein product [Blastocystis hominis]
Length = 1013
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + L S ++GD + P ++ IK V+ G C L G + WG
Sbjct: 237 LYGWGSNAYSML---SQKTGDYKSKPTLIMVPSMSPIKQVSAGSSFACILLENGQICCWG 293
Query: 65 G---CQAGQLGLGPQTRSFSFIPNESDTYFRN-IPILVVPNGVQLVA---CGHSHTLVYM 117
CQ G L P +R RN IPI + GV+ +A CG HTL
Sbjct: 294 NNAHCQCG--FLRPNSRE------------RNPIPIPTIVPGVEDIAEISCGKDHTLCLT 339
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
RDG++ +G N YG+ KST Y +PV+ + + K+AAG HS VL + +L
Sbjct: 340 RDGRLIVFGSNEYGELGLSKSTR--YTAPVEVPMPCRIVKIAAGSHHSLVLDETGAL 394
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG + Q G S ++ +P + I +++CG HT LT G L +G
Sbjct: 289 ICCWGNNAHCQCGFLRPNSRERNPIPIPTIVPGVEDIAEISCGKDHTLCLTRDGRLIVFG 348
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LGL TR + P E +P+ P + +A G H+LV G ++
Sbjct: 349 SNEYGELGLSKSTRYTA--PVE-------VPM---PCRIVKIAAGSHHSLVLDETGALYT 396
Query: 125 WGYNSYGQAA 134
G SYG +
Sbjct: 397 SG--SYGSKS 404
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G LGH S + P R+ L G IK ++CG H A+T G +Y W
Sbjct: 102 EVYSWGKNKGGILGHEDRLSFNM-TQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTW 160
Query: 64 GGCQAGQLGLGPQTRSFSFIP----NESDTYFRN--IPILVVPNG---VQLVACGHSHTL 114
G + G+LG + + I N S Y ++ +P + G + VACG T+
Sbjct: 161 GNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTV 220
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
V DGK++ +GYN YG + + + ++ K++AG A +T L
Sbjct: 221 VLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKL 279
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 4 DIYTWGLGSVGQLGH---------CSLQSGD-------KELLPRRVVALDGIFIKDVACG 47
++YTWG G+LGH ++ G+ +LP+++ +L I K VACG
Sbjct: 156 EVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACG 215
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLV 106
T L+ G +Y +G Q G LG SD P L+ N + +
Sbjct: 216 IQFTVVLSEDGKVYTFGYNQYGSLGY------------VSDQNSVTTPQLIKDLNDIVKI 263
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ G+S + GK++ WG N GQ N +S Y PS V
Sbjct: 264 SAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIV 304
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G LG+ S Q + P+ + L+ I ++ G A+T +G LY WG
Sbjct: 228 VYTFGYNQYGSLGYVSDQ--NSVTTPQLIKDLNDIV--KISAGYSFCAAITKQGKLYTWG 283
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV----PNGVQLVACGHSHTLVYMRDG 120
+ GQLG S + ++ P +V N + V+CG + + G
Sbjct: 284 NNRNGQLG-------------NSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQG 330
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 176
+++ WG+ GQ + + + P V++ ++ K+A GG H+A +T+ L +
Sbjct: 331 QLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ-KIIKIACGGSHAAFITEDNQLYQF 385
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQLG LQ+ + P + L IK V G + ALT G +Y+WG
Sbjct: 51 VYSWGYGGFGQLG---LQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWG 107
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G LG SF + + + ++ ++ ++CG H DG+++
Sbjct: 108 KNKGGILG---HEDRLSFNMTQPERIEK-----LLGKKIKQISCGQFHMAAVTEDGEVYT 159
Query: 125 WGYNSYGQAANEK 137
WG +G+ +E+
Sbjct: 160 WGNKEFGKLGHEE 172
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GQLG+ K + + + I DV+CG ALT +G LY WG
Sbjct: 279 LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIV--DVSCGDNFIAALTQQGQLYTWG 336
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG G N+SD Y R++ + +ACG SH D +++
Sbjct: 337 FGGDGQLGHG----------NKSDLYAPRHVEF---KQKIIKIACGGSHAAFITEDNQLY 383
Query: 124 GWGYNSYGQ------AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+G S GQ A+E S + P+ V + G +V + GG H+ +T
Sbjct: 384 QFGRGSEGQLGIGQNVASEASIRS-TPNLVQYFKGKQVVDVTCGGEHTIAITQ 435
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
+ WG GQLG D + R VA++G+ + +A G HTCALT+ G +
Sbjct: 77 VICWGNNEFGQLG-------DGTTIQRNTPVAVNGLSSGVVAIAAGYAHTCALTTSGGVS 129
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WG ++GQLG G T R P+ V + +GV +A G HT D
Sbjct: 130 CWGNNESGQLGNGI-------------TIQRRTPVQVAGLSSGVAAIAAGEYHTCALTTD 176
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WG N YGQ + +T P V V + AGG H+ LT
Sbjct: 177 GAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCALT 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + + +P VV L + +A GG HTCAL+++G + WG
Sbjct: 536 VTCWGGNWYGQLGDGTTT---QRNMPVNVVGLSS-GVAAIAAGGSHTCALSTEGGVTCWG 591
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
QLG G +T N P+ V + +GV +A G++HT + G++
Sbjct: 592 WNTYDQLGDGTRTN-------------HNTPVQVEGLSSGVAAIAAGYAHTCALITSGEV 638
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG+N YGQ + +T P V+ EV + AG H+ L+
Sbjct: 639 TCWGWNWYGQLGDGTTTQRMTPVVVNGLSSEVAAIVAGYAHTCALS 684
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALY 61
+ WG GQLG D + R V ++G+ + + G HTCAL+++G +
Sbjct: 434 VTCWGNNESGQLG-------DGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVT 486
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
WGG +GQLG G T+ R+ P+ V + +GV + G SHT
Sbjct: 487 CWGGNGSGQLGNGTTTQ-------------RSTPVQVEGLSSGVMAITAGDSHTCALTTG 533
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G + WG N YGQ + +T P V V +AAGG H+ L+
Sbjct: 534 GGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAAIAAGGSHTCALS 582
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG + + P +V L + D+ G HTCAL+++G + WG +
Sbjct: 386 WGRNWSGQLGDGTTT---QRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNE 441
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGW 125
+GQLG + T R+ P+ V + +GV + G SHT +G + W
Sbjct: 442 SGQLG-------------DGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCW 488
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G N GQ N +T P V+ V + AG H+ LT
Sbjct: 489 GGNGSGQLGNGTTTQRSTPVQVEGLSSGVMAITAGDSHTCALT 531
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + + P V+ L + + G V+TCALT+ G + WG
Sbjct: 230 VTCWGRNGNGQLGDGTTT---QRSTPVNVLGLSS-EVAAITAGDVYTCALTTGGGVTCWG 285
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKI 122
+GQLG + T R+ P+ VV +GV +A G+ HT G +
Sbjct: 286 ANWSGQLG-------------DGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGV 332
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N Y Q + +T P V+ +AAG GH+ +T
Sbjct: 333 SCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRAAAIAAGDGHTCAMT 378
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPN 101
+A G +TCALT+ A+ WG + GQLG + T RN P+ V + +
Sbjct: 61 IAAGDAYTCALTTNSAVICWGNNEFGQLG-------------DGTTIQRNTPVAVNGLSS 107
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
GV +A G++HT G + WG N GQ N + P V V +AAG
Sbjct: 108 GVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSGVAAIAAGE 167
Query: 162 GHSAVLT 168
H+ LT
Sbjct: 168 YHTCALT 174
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + QLG + + + P +V L + +A G HTCAL + G + WG
Sbjct: 587 VTCWGWNTYDQLGDGTRTNHNT---PVQVEGLSS-GVAAIAAGYAHTCALITSGEVTCWG 642
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G T+ R P++V + + V + G++HT G +
Sbjct: 643 WNWYGQLGDGTTTQ-------------RMTPVVVNGLSSEVAAIVAGYAHTCALSTGGGV 689
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG+N Y Q N + P VD V LAAG H+ L+
Sbjct: 690 TCWGWNKYYQLGNGTISQRSIPMDVDGLSSGVAALAAGDAHTCGLS 735
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD--VACGGVHTCALTSKGALYAWGG 65
WG+ QLG + ++ P V ++G+ + +A G HTCA+T+ G + WG
Sbjct: 335 WGVNQYSQLGDGTTT---QQSTP---VVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGR 388
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G T+ R P+ V + +GV + G SHT +G +
Sbjct: 389 NWSGQLGDGTTTQ-------------RRTPMQVEGLSSGVADITAGDSHTCALSTEGGVT 435
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG N GQ + + P V+ V + AG H+ L+
Sbjct: 436 CWGNNESGQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALS 480
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG + + + P V L VA G HTCAL++ G + W
Sbjct: 637 EVTCWGWNWYGQLGDGTTT---QRMTPVVVNGLSSEVAAIVA-GYAHTCALSTGGGVTCW 692
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGK 121
G + QLG G ++ R+IP+ V + +GV +A G +HT G
Sbjct: 693 GWNKYYQLGNGTISQ-------------RSIPMDVDGLSSGVAALAAGDAHTCGLSTGGG 739
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG++ YGQ T A+ +PVD
Sbjct: 740 VTCWGWDVYGQLG--VGTIAYRTTPVD 764
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG QLG+ ++ + +P V L + +A G HTC L++ G + WG
Sbjct: 689 VTCWGWNKYYQLGNGTI---SQRSIPMDVDGLSS-GVAALAAGDAHTCGLSTGGGVTCWG 744
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
GQLG+G T ++ P + F +P++
Sbjct: 745 WDVYGQLGVG--TIAYRTTPVDVTVLFVYLPVI 775
>gi|70949528|ref|XP_744165.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524006|emb|CAH74665.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 426
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL--DGIFIKDVACGGVHTCALTSKGA 59
D+Y+WG G G L G+K L P+++ A D ++ CG H+ ALT G
Sbjct: 150 DLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCGEQHSLALTKSGK 209
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y G + G+LG G F E YF N I++ + +ACG+S + +
Sbjct: 210 VYGCGKGEFGRLGKGNHGDQLFF---EEIDYFVNNNIII-----KDIACGNSFSAALSNN 261
Query: 120 GKIHGWGYNSYGQAANEKS-----TYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDAC 171
G+++ WG N YGQ E S ++ YP+ V + E ++ +A G H AC
Sbjct: 262 GEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMI----AC 317
Query: 172 SLKELCEF 179
S + F
Sbjct: 318 SESNIIYF 325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE----LLPRRVVALD-GIFIKDVACGGVHTCALTSKGA 59
IYT+GL GQLG G KE L P + D I KDV CG HT A+
Sbjct: 91 IYTYGLNDKGQLGRTLSNEGGKESKISLTPEEIELDDKSIKFKDVCCGYKHTLAVDENND 150
Query: 60 LYAW---GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
LY+W G G GLG ++ P + + + + + + CG H+L
Sbjct: 151 LYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFIN------ICCGEQHSLAL 204
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTD 169
+ GK++G G +G+ + +D+ V ++ +A G SA L++
Sbjct: 205 TKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNIIIKDIACGNSFSAALSN 260
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y G G G+LG + GD+ + I IKD+ACG + AL++ G +Y W
Sbjct: 210 VYGCGKGEFGRLGKGN--HGDQLFFEEIDYFVNNNIIIKDIACGNSFSAALSNNGEVYVW 267
Query: 64 GGCQAGQLGLGPQT---RSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG+ S PN+ + NI I +L+ACG +H +
Sbjct: 268 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKI-------KLIACGDNHMIACSES 320
Query: 120 GKIHGWG 126
I+ WG
Sbjct: 321 NIIYFWG 327
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG G S+Q+G+K P ++ + I ++ G H A G +Y +
Sbjct: 38 NLWRWGCSGDGLFS--SIQAGEKYPFPEKIRNFENKQINKLSAGCNHA-AFIVDGKIYTY 94
Query: 64 GGCQAGQLGL-----GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G GQLG G + S P E + ++I + V CG+ HTL
Sbjct: 95 GLNDKGQLGRTLSNEGGKESKISLTPEEIELDDKSIKF-------KDVCCGYKHTLAVDE 147
Query: 119 DGKIHGWGY 127
+ ++ WG+
Sbjct: 148 NNDLYSWGW 156
>gi|326519524|dbj|BAK00135.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1067
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG G+ QLG +G+ + LP +V AL G +IK VA H+ A++S G LY
Sbjct: 153 EVFSWGSGTNYQLG-----TGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSSDGELY 207
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G+LG P RS + R + + + V +VA HT++ G+
Sbjct: 208 TWGFGRGGRLG-HPDIRSGQ---TTAVITPRQVTVGLGRKKVNVVAAAKHHTVIATSAGE 263
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ WG N GQ P V + +AA HSA + D
Sbjct: 264 LFTWGSNREGQLGYPSVDTQPTPRRVSSLKQRIIAVAAANKHSAAVAD 311
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + PRRV +L I VA H+ A+ G ++ W
Sbjct: 263 ELFTWGSNREGQLGYPSV---DTQPTPRRVSSLKQRIIA-VAAANKHSAAVADTGEVFTW 318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + + IP + Y + + V+ HTLV+ DG++
Sbjct: 319 GSNKEGQLGYGTSNSASNCIPRMVE-YLKG-------KVFKGVSAAKYHTLVFGADGEVF 370
Query: 124 GWGY 127
WG+
Sbjct: 371 TWGH 374
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G I +ACG H+ +++ G L+ +
Sbjct: 3288 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTF 3344
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRDG 120
G G+LGLG +T + IP V Q+ V CG +HTL DG
Sbjct: 3345 GNGDYGRLGLG-------------NTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADG 3391
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G YG+ ST P VD G V+K+ G S LT
Sbjct: 3392 NTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALT 3441
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P++V AL+ F++DV G H+ ALTS G ++AWG GQLG+G DT
Sbjct: 3468 PQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG-------------DT 3514
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
R P LV T + ++ + WG N GQ + P V
Sbjct: 3515 NARREPCLV--------------TALQGKNVR-QVWGSNGDGQLGIGDTNARREPCLVTD 3559
Query: 150 CVGE-VRKLAAGGGHSAVLTDACSLKELCEFRLAES 184
G+ VR+++AG HS T K +F ES
Sbjct: 3560 LQGKNVRQISAGRNHSGGWTAPPPPKRAPDFCRQES 3595
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++++G G G+LG L + + P+RV L GI +K V CG + ALT G ++ +G
Sbjct: 3394 VWSFGDGDYGKLG---LGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFG 3450
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q +G P++RS + + +P L V+ V G H+L G++
Sbjct: 3451 --QERLIG-QPESRS------RNHNRPQQVPALEA-FFVEDVVVGAEHSLALTSTGEVWA 3500
Query: 125 WGYNSYGQ 132
WG N GQ
Sbjct: 3501 WGSNGDGQ 3508
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDV--ACGGV-HTCALTSKGALYAWG 64
G GS G+LG Q +L ++ AL G + + +CG H+ ALT G +++WG
Sbjct: 3238 GEGSYGRLG----QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 3293
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG G R R I L +Q+ ACG H+ V DGK+
Sbjct: 3294 DGDYGKLGHGNSDR---------QRRPRQIEALQGEEIIQM-ACGFKHSAVVSADGKLFT 3343
Query: 125 WGYNSYGQ 132
+G YG+
Sbjct: 3344 FGNGDYGR 3351
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y WG G GQL ++G L P + + + CG T + + G + A
Sbjct: 3184 EAYMWGGGRHGQLA----ETGRSLLTPTVTPSFSQA--QQIICGQNCTFVIQANGTVQAC 3237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLV-ACGHS-HTLVYMR 118
G G+LG G N D + + I+ G QLV +CG H++
Sbjct: 3238 GEGSYGRLGQG----------NSDDLH--QLTIISALQGFVVTQLVTSCGSDGHSMALTE 3285
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G E+ ++A G HSAV++
Sbjct: 3286 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVS 3336
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG+ + LP +V L G+ V GG ++ AL S G ++AWG
Sbjct: 157 VWAWGDNRYNQLGNVGAT---RSNLPVQVPGLSGVIA--VVAGGYYSLALRSDGTVWAWG 211
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G T+ R +P+ V+ +GV ++ G HT+ DG +
Sbjct: 212 DNRYGQLGDGTTTQ-------------RAVPVQVLNLSGVMNLSAGSFHTVALRSDGSVW 258
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG+N+YGQ + +T + P V + +V L AG HS AV +D
Sbjct: 259 AWGFNAYGQLGDGTTTSRFQPVQV--GLSDVLTLVAGNYHSLAVRSDGA 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ GQLG +L P +V L G+ V+ G H+ AL S G ++AWG
Sbjct: 455 VWAWGVNEHGQLGDGTLT---DRTRPVQVAGLSGV--SAVSAGSYHSLALRSNGTVWAWG 509
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G T R P+ V +GV VA G SH+L DG +
Sbjct: 510 FNRYGQLGDGTNTD-------------RLQPVQVAGLSGVVAVAAGDSHSLALRSDGTVW 556
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
WGYN GQ + +Y+W PV
Sbjct: 557 AWGYNFDGQIGD--GSYSWRFLPV 578
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG +L P RV L G+ VA G H+ L+S G ++AWG
Sbjct: 57 VWAWGFNRQGQLGDGTLV---DSPTPVRVTNLSGVV--SVASGDYHSLGLSSDGTVWAWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQLG G T S S +P +N+ +GV + G SH L DG +
Sbjct: 112 DNTAGQLGNG--TASASPVP----VRVQNL------SGVVSLGSGFSHGLALRSDGTVWA 159
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG N Y Q N +T + P V G + +A G
Sbjct: 160 WGDNRYNQLGNVGATRSNLPVQVPGLSGVIAVVAGG 195
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + S P +V D + + G H+ A+ S GA++AWG
Sbjct: 257 VWAWGFNAYGQLGDGTTTS---RFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWG 310
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ QLG G T + S +P +S + GV LVA G+ H+LV DG +
Sbjct: 311 DNRYRQLGDG--TTTSSRVPVQSG----------LSGGVTLVA-GYKHSLVLRSDGTVWS 357
Query: 125 WGYNSYGQ 132
WG N +GQ
Sbjct: 358 WGDNVFGQ 365
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG S + + P +V L G+ + G H+ L S G ++AWG
Sbjct: 605 VWTWGYNGSGQLGDGS--TAINKPAPVQVAGLSGVV--SLGSGNYHSLGLRSDGTVWAWG 660
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + R+ P+ V +GV V G H+L DG +
Sbjct: 661 FNFDGQLG-------------DGSLLNRSTPVRVSGLSGVVSVVAGDYHSLARRSDGTVW 707
Query: 124 GWGYNSYGQ 132
WGYN GQ
Sbjct: 708 AWGYNGEGQ 716
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGALY 61
+++WG GQLG D PR V+ + DV+ G +H+ L S GA++
Sbjct: 355 VWSWGDNVFGQLG-------DGTFNPRSSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVW 407
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG +GQLG G S P V G V+ G HTLV D
Sbjct: 408 AWGDNYSGQLGNGTGLDSLVAAP-------------VGLGGSVAVSAGFKHTLVLKADTT 454
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRL 181
+ WG N +GQ + T P V G V ++AG HS L ++ R
Sbjct: 455 VWAWGVNEHGQLGDGTLTDRTRPVQVAGLSG-VSAVSAGSYHSLALRSNGTVWAWGFNRY 513
Query: 182 AESVTLSNASEIE--DVASRTGSEALA 206
+ +N ++ VA +G A+A
Sbjct: 514 GQLGDGTNTDRLQPVQVAGLSGVVAVA 540
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G H+ + S G ++AWG + GQLG G + + + + N+ +GV
Sbjct: 41 LALGQYHSVGVHSDGTVWAWGFNRQGQLGDG------TLVDSPTPVRVTNL------SGV 88
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
VA G H+L DG + WG N+ GQ N ++ + P PV
Sbjct: 89 VSVASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPV 130
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQ+G S LP V + + V+ GG H+ AL S G ++ WG
Sbjct: 555 VWAWGYNFDGQIGDGSYS---WRFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWG 609
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G S + P+ V +GV + G+ H+L DG +
Sbjct: 610 YNGSGQLGDG------------STAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVW 657
Query: 124 GWGYNSYGQ 132
WG+N GQ
Sbjct: 658 AWGFNFDGQ 666
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG SL P RV L G+ V G H+ A S G ++AWG
Sbjct: 656 VWAWGFNFDGQLGDGSLL---NRSTPVRVSGLSGVV--SVVAGDYHSLARRSDGTVWAWG 710
Query: 65 GCQAGQLGLGPQTRSFSFIP 84
GQLG G TR+ + +P
Sbjct: 711 YNGEGQLGDG--TRNDTLVP 728
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+GLG GQLGH + + +P+ V AL I+ V CG HT +T KG LY +
Sbjct: 264 EVYTFGLGQFGQLGHGTFIF--ETHIPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTF 321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G + G+LGLG + + F+P + + VQ VACG H LV+
Sbjct: 322 GDGRHGKLGLGEENFTNQFVPILCSNFLKFT--------VQSVACGGCHMLVF 366
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG +++G P V AL + ACG HT T +G LY+ G
Sbjct: 58 LYVFGSNNWGQLG---VEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG T F+ I ++ ++ G + + DGK+
Sbjct: 115 GNSEGQLGLGDTA---------GRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFM 165
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ EK T P VD G+ + ++ G HSA +T
Sbjct: 166 WGDNSEGQLGLEKGTIYCTPQKVD--TGKPIAWISCGYYHSAFVT 208
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG L+ G P++V G I ++CG H+ +T G LY +G
Sbjct: 163 LFMWGDNSEGQLG---LEKGTIYCTPQKVDT--GKPIAWISCGYYHSAFVTQDGELYTFG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LGL P P +L + V +V+CG HT+ + + +++
Sbjct: 218 EPENGKLGLPPDKIKKHKKPQR---------VLGLSGKVTMVSCGGEHTIA-VTEKEVYT 267
Query: 125 WGYNSYGQAANEKSTYAWY-PSPVDWCV-GEVRKLAAGGGHSAVLTD 169
+G +GQ + + + P VD ++R + G H+A++T+
Sbjct: 268 FGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITE 314
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G+LG K P+RV+ L G + V+CGG HT A+T K +Y +
Sbjct: 212 ELYTFGEPENGKLG-LPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAVTEK-EVYTF 268
Query: 64 GGCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G Q GQLG G +F F IP D + ++ V CG +HT + G
Sbjct: 269 GLGQFGQLGHG----TFIFETHIPKAVDA--------LTKKKIRYVTCGENHTAIITEKG 316
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL-------TDA 170
++ +G +G+ + + P+ ++ V+ +A GG H V ++
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFATPRPQESEV 376
Query: 171 CSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLRE 214
EL E RL +L+ SE+ R+ S ARL R +E
Sbjct: 377 IINDELKENRLVVP-SLNGDSEMSTSLQRSHS---ARLRRREKE 416
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T G LY +G GQLG+ + S I + + V
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGV----EAGSAISKPTCVK------ALKSEKV 91
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGG 161
L ACG HTLVY GK++ G NS GQ + + + + +++L+AG
Sbjct: 92 VLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGS 151
Query: 162 GHSAVLT 168
SA LT
Sbjct: 152 NMSAALT 158
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YT+GLG GQLGH + E P+ V L I +ACG HT +T G +Y +
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSE--PKTVDHLGKHKICHIACGENHTALITENGLMYTF 319
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G + G+LGLG + + F+P + R I V VACG H LV+
Sbjct: 320 GDGRHGKLGLGEENYTNQFVPTLCSNFLRFI--------VHSVACGGCHMLVF 364
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG S + +K P V AL +K ACG HT T +G +YA G
Sbjct: 56 LYMFGSNNWGQLGFGSKNAVNK---PTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E + F I + ++ +A G + V DG++
Sbjct: 113 GNSEGQLGLG---------DTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVM 163
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ Y P VD +G+ V ++ G HSA++T
Sbjct: 164 WGDNSEGQIGLGDKAYVSVPHQVD--IGKPVSCISCGYYHSALIT 206
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VP 100
++CG HT +T G LY +G GQLG G + N P V P
Sbjct: 40 ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAV-------------NKPTCVKALKP 86
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTY---AWYPSPVDWCVGE 153
V+L ACG +HTL+ G ++ G NS GQ E+ST+ +++ +
Sbjct: 87 EKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQ-----HK 141
Query: 154 VRKLAAGGGHSAVLTD 169
+++LAAG SAVLT+
Sbjct: 142 IKQLAAGSYTSAVLTE 157
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 8 WGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQ+G GDK + P +V G + ++CG H+ +T G LY +G
Sbjct: 164 WGDNSEGQIG-----LGDKAYVSVPHQVDI--GKPVSCISCGYYHSALITQDGELYTFGE 216
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIH 123
+ G+LGL P+ + N +P LV + V VACG HT+V + +G ++
Sbjct: 217 PENGKLGLSPKQ-----LKNH------KLPQLVSGISGKVSKVACGGGHTVV-LAEGDVY 264
Query: 124 GWGYNSYGQAANEKSTY-AWYPSPVDWC-VGEVRKLAAGGGHSAVLTD 169
+G YGQ + + P VD ++ +A G H+A++T+
Sbjct: 265 TFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITE 312
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G+LG Q + +L P+ V + G + VACGG HT L ++G +Y +
Sbjct: 210 ELYTFGEPENGKLGLSPKQLKNHKL-PQLVSGISGK-VSKVACGGGHTVVL-AEGDVYTF 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLG G +F F +E T + + + +ACG +HT + +G ++
Sbjct: 267 GLGQYGQLGHG----TFVFETSEPKTVDH-----LGKHKICHIACGENHTALITENGLMY 317
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVR----KLAAGGGHSAVL 167
+G +G+ E T + P+ C +R +A GG H V
Sbjct: 318 TFGDGRHGKLGLGEENYTNQFVPT---LCSNFLRFIVHSVACGGCHMLVF 364
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +G GQLG + + + +L P +V L+ ++ CG HT AL S L+A+G
Sbjct: 588 FAFGKNDYGQLG---IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFG 644
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGKI 122
GQLGLG S + F N ++ G +V ACG HT+ +G +
Sbjct: 645 RNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVM 704
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G N++GQ +T YP P+D VG+ + +AAG H+ VLT
Sbjct: 705 YVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH S D+++ P+ V AL I VACG HT +T G +A+
Sbjct: 534 NLYTFGRNDYGQLGHND--SIDRKI-PQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAF 590
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-----VACGHSHTLVYMR 118
G GQLG+ DT + + V G++ + CG+ HT+
Sbjct: 591 GKNDYGQLGI--------------DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCS 636
Query: 119 DGKIHGWGYNSYGQ 132
+ +G N YGQ
Sbjct: 637 GAHLFAFGRNDYGQ 650
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG---ALY 61
+ T G GQLGH + S E +P+ + +L+ ++ V+C HT G LY
Sbjct: 480 VATCGYNYRGQLGHGNTTS---ESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLY 536
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 118
+G GQLG +D+ R IP V + VACG HT+V
Sbjct: 537 TFGRNDYGQLG-------------HNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTV 583
Query: 119 DGKIHGWGYNSYGQ 132
GK +G N YGQ
Sbjct: 584 SGKAFAFGKNDYGQ 597
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++ G S G+LGH S R+ AL I + G HT LT+ G ++
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 430
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ G G R ++ IP + + G HT++ DG++
Sbjct: 431 GYNDNGQCGQGGTARV---------SHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 481
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GYN GQ + +T P + ++ +L + + VL
Sbjct: 482 TCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVL 525
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 19/174 (10%)
Query: 2 HLDIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
H +++ WG GS G LGH ++ G+ P+ V +L G+ +K V+CG TCALT G L
Sbjct: 325 HGEVFCWGEGSGGXLGHKVNMDMGN----PKIVESLTGVLVKSVSCGEYQTCALTHSGEL 380
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYM 117
Y WG +G +G + + +IP+ L P NG + VACG H +
Sbjct: 381 YTWGDNGSGIDLVGERRKRSQWIPSR----------LSGPLNGTSISNVACGEWHMAIVS 430
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G++ +G ++G + K P V+ G V+ A G H+A + +
Sbjct: 431 TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 484
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 41/190 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL--------- 54
++T+G G+ G LGH L+S + P+ V +L G+++K ACG HT A+
Sbjct: 434 QLFTYGDGTFGVLGHGKLESISQ---PKEVESLSGLWVKAAACGPWHTAAIVEVRADRLK 490
Query: 55 --TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
T G L+ WG G+LG G Q R +P + LV + VQ V+CG
Sbjct: 491 FNTKGGKLFTWGDGDKGRLGHGDQER--KLLPT-------CVAQLVDHDFVQ-VSCGRML 540
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---------EVRKLAAGGGH 163
T+ G ++ G +GQ N P D + V+++++G H
Sbjct: 541 TVGLTCLGTVYTMGSAVHGQLGN--------PQAKDKSIAIVGGKLKDEFVKEISSGSYH 592
Query: 164 SAVLTDACSL 173
A LT SL
Sbjct: 593 VAALTSKGSL 602
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHTCALTSKGALYA 62
+YT G GQLG+ Q+ DK + +V L F+K+++ G H ALTSKG+LY
Sbjct: 550 VYTMGSAVHGQLGN--PQAKDKSIA---IVGGKLKDEFVKEISSGSYHVAALTSKGSLYT 604
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 113
WG GQLGLG DT RN P +V V+ +ACG T
Sbjct: 605 WGMGANGQLGLG-------------DTEDRNSPAVVEALRDRQVESIACGSGFT 645
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALY 61
++TWG G G+LGH GD+E LLP V L D F++ V+CG + T LT G +Y
Sbjct: 498 LFTWGDGDKGRLGH-----GDQERKLLPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGTVY 551
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG PQ +S + + + F V+ ++ G H
Sbjct: 552 TMGSAVHGQLG-NPQAKDKSIAIVGGKLKDEF-----------VKEISSGSYHVAALTSK 599
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G ++ WG + GQ + P+ V+ +V +A G G +A +
Sbjct: 600 GSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAI 648
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
LLP+ + + + +++++ GG H +T G ++ WG G LG ++
Sbjct: 296 LLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLG------------HKV 343
Query: 88 DTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYG--QAANEKSTYAWY 143
+ N I+ G V+ V+CG T G+++ WG N G + W
Sbjct: 344 NMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWI 403
Query: 144 PSPVDWCVG--EVRKLAAGGGHSAVLTDACSL 173
PS + + + +A G H A+++ + L
Sbjct: 404 PSRLSGPLNGTSISNVACGEWHMAIVSTSGQL 435
>gi|68073201|ref|XP_678515.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499009|emb|CAH95917.1| conserved hypothetical protein [Plasmodium berghei]
Length = 426
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL--DGIFIKDVACGGVHTCALTSKGA 59
D+Y+WG G G L G+K L P+++ A D ++ CG H+ ALT G
Sbjct: 150 DLYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFINICCGEQHSLALTESGK 209
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y G + G+LG G F E YF N I++ + +ACG+S + +
Sbjct: 210 VYGCGKGEFGRLGKGNHGDQLFF---EEIDYFTNNNIII-----KDIACGNSFSAALSNN 261
Query: 120 GKIHGWGYNSYGQAANEKS-----TYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDAC 171
G+++ WG N YGQ E S ++ YP+ V + E ++ +A G H AC
Sbjct: 262 GEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMI----AC 317
Query: 172 SLKELCEF 179
S + F
Sbjct: 318 SESNIIYF 325
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE----LLPRRVVALDG--IFIKDVACGGVHTCALTSKG 58
IYT+GL GQLG G KE L P + LD I KDV CG HT A+
Sbjct: 91 IYTYGLNDKGQLGRTLSNEGGKESKISLTPEEI-ELDNKNIKFKDVCCGYKHTLAVDVNN 149
Query: 59 ALYAW---GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
LY+W G G GLG ++ P + + + + + + CG H+L
Sbjct: 150 DLYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFIN------ICCGEQHSLA 203
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTD 169
GK++G G +G+ + +D+ ++ +A G SA L++
Sbjct: 204 LTESGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNIIIKDIACGNSFSAALSN 260
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y G G G+LG + GD+ + I IKD+ACG + AL++ G +Y W
Sbjct: 210 VYGCGKGEFGRLGKGN--HGDQLFFEEIDYFTNNNIIIKDIACGNSFSAALSNNGEVYVW 267
Query: 64 GGCQAGQLGLGPQT---RSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG+ S PN+ + NI I +L+ACG +H +
Sbjct: 268 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKI-------KLIACGDNHMIACSES 320
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG---HSAVLTD 169
I+ WG +A E P + + + + K+ AGG +S +L+D
Sbjct: 321 NIIYFWG----SRAWLEPKAITLNPKYQNSLIKKNIDKIQAGGSTYYYSMLLSD 370
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
W G G S+Q+G+K LP ++ + I ++ G H A G +Y +G
Sbjct: 40 WRWGCSGDSLFSSMQAGEKNTLPEKISNFENKQINKLSAGCNHA-AFIVDGKIYTYGLND 98
Query: 68 AGQLGL-----GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G + S P E + +NI + V CG+ HTL + +
Sbjct: 99 KGQLGRTLSNEGGKESKISLTPEEIELDNKNIKF-------KDVCCGYKHTLAVDVNNDL 151
Query: 123 HGWGY 127
+ WG+
Sbjct: 152 YSWGW 156
>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
protein) like [Arabidopsis thaliana]
gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 454
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I+ WG GQLG + S D P+RV L+ + ++ GV + A+ G+L+ W
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVW 161
Query: 64 GGCQAGQLGLGP---QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG + R S + N + + V V+ G H L DG
Sbjct: 162 GRSKRGQLGLGNGIIEARVPSRVENLAAEH------------VVKVSLGWGHALALTVDG 209
Query: 121 KIHGWGYNSYGQAAN 135
K+ GWGY + G+ N
Sbjct: 210 KVFGWGYVADGRVGN 224
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+I +WG QLG G E LPR V DG V+ G VH+ +T KG + W
Sbjct: 355 NILSWGWNRSRQLGR-----GKPENLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVW 409
Query: 64 GGCQAGQLGLGPQT 77
G + G+LGLG +
Sbjct: 410 GCGKNGRLGLGSSS 423
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 75/197 (38%), Gaps = 40/197 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG L +G E +P RV L + V+ G H ALT G ++ W
Sbjct: 158 LWVWGRSKRGQLG---LGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFR-------------------------NIPILV 98
G G++G S + + +D + ++PI
Sbjct: 215 GYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAW 274
Query: 99 VP--------NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
P V +ACG H+L+ DG + G N YGQ K PVD
Sbjct: 275 EPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGM--KPVDIT 332
Query: 151 VGEVRKLAAGGGHSAVL 167
+ +AAG GHS +
Sbjct: 333 ESPI-SIAAGLGHSLAI 348
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 27 ELLPRRVVALDGIFIKDVACGGVHTCALTS----KGALYAWGGCQAGQLGLGPQTRSFSF 82
+L +V + D F V GV TS + + ++G G LGL S S
Sbjct: 9 KLQISKVYSSDSRFCTHVLFNGVVRRQFTSTSGERRTVMSFGDGNLGALGL-----SSSS 63
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
IP + + +P+ + ++ GH H+L G+I WG N GQ
Sbjct: 64 IPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQ 113
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ ++G G++G LG S+ + VV+ I ++ G H+ A+TS G ++A
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWA 105
Query: 63 WGGCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDG 120
WG GQLG + +R P + N+ + +GV A G DG
Sbjct: 106 WGRNDEGQLGRIVIDSRDSRSEPKRVEG-LENVNVQAAFASGVVSAAIGD--------DG 156
Query: 121 KIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG + GQ A PS V+ E V K++ G GH+ LT
Sbjct: 157 SLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALT 206
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WGL G C S D EL P V +L GI I+ VA G HT ++ G +YA+GG
Sbjct: 107 FGWGL-----YGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGG 161
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G ++++T R + + N V+ ++CG HT + +GK+
Sbjct: 162 NQFGQLGTG---------SDQAETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFS 212
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 213 WGWNKYGQ 220
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS---FIP- 84
+P V G+ I VA GG HT L+ G ++ WG GQLGLG + R S IP
Sbjct: 1 MPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPC 60
Query: 85 ----------NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
S+ + IP + ++ +ACG H+ V G + +G+ YGQ
Sbjct: 61 IDSSSLVQGSMSSEGHNFRIP----GSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCG 116
Query: 135 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ P+ V +G ++ +AAG H+
Sbjct: 117 QGSTDDELSPTCVSSLLGIQIEGVAAGLWHT 147
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 4 DIYTWGLGSVGQLGHCS----------LQSGDKELLPRRVVA-------LDGIFIKDVAC 46
++ WG G GQLG S + D L + ++ + G IK +AC
Sbjct: 31 QVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEGHNFRIPGSCIKAIAC 90
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL- 105
GG H+ +T GA+ A+G GQ G G S P + G+Q+
Sbjct: 91 GGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELS--PTCVSSLL----------GIQIE 138
Query: 106 -VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGG 161
VA G HT+ DG ++ +G N +GQ P +D E V+ ++ G
Sbjct: 139 GVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGA 198
Query: 162 GHSAVLTD 169
H+A++TD
Sbjct: 199 RHTALVTD 206
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG S + P R+ L GI +ACGG HT ++ A++ W
Sbjct: 159 ELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGW 218
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +T R++ P + T R + GV+ VACG ++ +G +
Sbjct: 219 GRNNCGQLGLNDETNRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGV 267
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G +YGQ + S+ P V +G + ++A G H+ L +
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G QLGH + K P ++ L+ I +ACG H+ ALT G + +WG
Sbjct: 57 VYACGSNDYSQLGH---ELPTKR--PLQIPELEDYVITQIACGSRHSMALTEWGQVLSWG 111
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
+ GQLG + SD +P +V V V +ACG++H+L G+
Sbjct: 112 DNECGQLG------------HASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGE 159
Query: 122 IHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
++ WG N YGQ + + + YP + +G +A GG H+ +++ + ++
Sbjct: 160 LYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAV 215
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y WG S GQLG ++ ++ L P ++ + VACG HT LT+ G +YA
Sbjct: 1 MELYCWGNASHGQLGLGGIED-EQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYA 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG T+ IP D I ACG H++ G++
Sbjct: 60 CGSNDYSQLGHELPTKRPLQIPELEDYVITQI------------ACGSRHSMALTEWGQV 107
Query: 123 HGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG N GQ + P V + V + V ++A G HS LT
Sbjct: 108 LSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT 155
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T G G+ GQLGH E+LPR V+ L G I VACG HT AL S+G +Y +
Sbjct: 267 VFTCGAGAYGQLGHGF---SSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGF 323
Query: 64 GGCQAGQLG 72
G +GQLG
Sbjct: 324 GLGSSGQLG 332
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 60 LYAWGGCQAGQLGLG----PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
LY WG GQLGLG Q + S IP + D+ V VACGH HTL
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDS------------AVNQVACGHRHTLF 50
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
GK++ G N Y Q +E T P D+ + ++ A G HS LT+
Sbjct: 51 LTASGKVYACGSNDYSQLGHELPTKRPLQIPELEDYVITQI---ACGSRHSMALTE 103
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 35 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 89
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E +NI L GV + CG +L +
Sbjct: 90 VFSWGDGDFGKLGRG---------GSEGCNIPQNIERL-NGQGVCQIECGAQFSLALTKS 139
Query: 120 G-----KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
G +++ WG N +GQ N +T P+ V G+ + ++A G HS T
Sbjct: 140 GVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 920
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 921 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 967
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 968 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 1020
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR + AL I+D+ACG H+ ALTS G LY WG + G+LG G T
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK-------- 57
Query: 90 YFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+ + +L+ +Q VACG + TL +G + WG +G+ S P +
Sbjct: 58 -PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 115
Query: 148 DWCVGE-VRKLAAGGGHSAVLTDA 170
+ G+ V ++ G S LT +
Sbjct: 116 ERLNGQGVCQIECGAQFSLALTKS 139
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 971 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 1027
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G SD + R + G ++ +A G H + DG++
Sbjct: 1028 KGDYHRLGHG------------SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 1075
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ WG N GQ + + P V G +V ++A G H+
Sbjct: 1076 YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 1118
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 1023 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 1080 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 1121
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 833 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 890
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 891 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 942
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 943 EALQGHRVVDIACGSGDAQTL 963
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 1074 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 1121
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 1122 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 1149
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 759 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 814
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 815 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 867
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 917
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G+ GQLGH + S L P+ V +LDG FI V+ G H+ ++ G ++ G
Sbjct: 72 VLSWGRGNSGQLGHGLVVS--NSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCG 129
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGK 121
GQLG G S P+ V V V+ VACG H+LV ++ +
Sbjct: 130 DGSFGQLGHGDHASHCS-------------PVKVSCFVDQHVEQVACGMRHSLVLLKGNQ 176
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
++G+G GQ +N++ P V G E+ +AA G HSA ++
Sbjct: 177 VYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVS 226
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 26 KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLG-------PQTR 78
+E+ +V LDG I D+A G H+ +T G + WG + GQLGLG P T
Sbjct: 302 REVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTV 361
Query: 79 SFSFIPNES 87
S + NE+
Sbjct: 362 SLGYDLNEA 370
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 44/171 (25%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G G GQLG S +P+ V +G+ I +A G H+ A++ G +Y WG
Sbjct: 177 VYGFGSGKRGQLG-VSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWG 235
Query: 65 G---------------------------------------CQAGQLGLGPQTRSFSFIPN 85
C G LG + + P
Sbjct: 236 RGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPA 295
Query: 86 ESDTYFRNIPILVVP--NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ + R + + VP +G ++ +A G H+++ G+I WG+ +GQ
Sbjct: 296 KHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQ 346
>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1086
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG GS G+LGH ++ G +P+ V +LD + IK V CG TCALT G LY
Sbjct: 330 EVFCWGDGSRGKLGHKVNMDVG----MPKVVESLDDVHIKSVVCGEYQTCALTHSGELYT 385
Query: 63 WGGCQAG-QLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G L +TRS ++P + I I VACG HT + G+
Sbjct: 386 WGDNKNGANLTDEMRTRS-QWLPYKLFGPLDGITI-------SKVACGEWHTAIVSLSGQ 437
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ +G ++G + +P V G V+ +A G H+A + D
Sbjct: 438 LFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVD 486
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS-------- 56
++T+G G+ G LGH SLQS P+ V +L G+ +K VACG HT A+
Sbjct: 438 LFTYGDGTFGVLGHGSLQSVSH---PKEVASLRGLSVKSVACGSWHTAAIVDIIADRFKF 494
Query: 57 ---KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGH 110
G L+ WG G+LG SD + +P V V V+CG
Sbjct: 495 NAVGGKLFTWGDGDKGRLG-------------HSDMEKKLVPTCVAKLVDYDFIRVSCGR 541
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLT 168
T+ GK++ G + +GQ N ++ + V+ + E V+++++G H AVLT
Sbjct: 542 MLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSI-TIVEGKLKEEFVKEISSGSYHVAVLT 600
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG G G+LGH + +K+L+P V L D FI+ V+CG + T ALT+ G +Y
Sbjct: 501 LFTWGDGDKGRLGHSDM---EKKLVPTCVAKLVDYDFIR-VSCGRMLTVALTNTGKVYTM 556
Query: 64 GGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G GQLG PQ +S + + + F V+ ++ G H V G
Sbjct: 557 GSSVHGQLG-NPQAKDKSITIVEGKLKEEF-----------VKEISSGSYHVAVLTSGGN 604
Query: 122 IHGW 125
++ W
Sbjct: 605 VYTW 608
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 4 DIYTWGLG--------SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT 55
D+ WG G V +LG+ S+ D L+P+ + + + ++ ++ G H +T
Sbjct: 268 DVLMWGEGVEGGNIGGMVQRLGNQSVMQVD-ALVPKLLESTAMLDVRSISLGRKHAALIT 326
Query: 56 SKGALYAWGGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+G ++ WG G+LG + + + D + ++ V CG T
Sbjct: 327 KRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKS------------VVCGEYQT 374
Query: 114 LVYMRDGKIHGWGYNSYGQAANE--KSTYAWYP----SPVDWCVGEVRKLAAGGGHSAVL 167
G+++ WG N G + ++ W P P+D + K+A G H+A++
Sbjct: 375 CALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGIT--ISKVACGEWHTAIV 432
Query: 168 T 168
+
Sbjct: 433 S 433
>gi|82915023|ref|XP_728941.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii 17XNL]
gi|23485631|gb|EAA20506.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii]
Length = 426
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL--DGIFIKDVACGGVHTCALTSKGA 59
D+Y+WG G G L G+K L P+++ A D ++ CG H+ ALT G
Sbjct: 150 DLYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFINICCGEQHSLALTKSGK 209
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y G + G+LG G F E YF N I++ + +ACG+S + +
Sbjct: 210 VYGCGKGEFGRLGKGNHGDQLFF---EEIDYFTNNNIII-----KDIACGNSFSAALSNN 261
Query: 120 GKIHGWGYNSYGQAANEKS-----TYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDAC 171
G+++ WG N YGQ E S ++ YP+ V + E ++ +A G H AC
Sbjct: 262 GEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMI----AC 317
Query: 172 SLKELCEF 179
S + F
Sbjct: 318 SESNIIYF 325
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE----LLPRRVVALD-GIFIKDVACGGVHTCALTSKGA 59
IYT+GL GQLG G KE L P + D I KDV CG HT A+
Sbjct: 91 IYTYGLNDKGQLGRTVSNGGGKESKISLTPEEIELDDKNIKFKDVCCGYKHTLAVDVNND 150
Query: 60 LYAW---GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
LY+W G G GLG ++ P + + + + + + CG H+L
Sbjct: 151 LYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFIN------ICCGEQHSLAL 204
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTD 169
+ GK++G G +G+ + +D+ ++ +A G SA L++
Sbjct: 205 TKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNIIIKDIACGNSFSAALSN 260
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y G G G+LG + GD+ + I IKD+ACG + AL++ G +Y W
Sbjct: 210 VYGCGKGEFGRLGKGN--HGDQLFFEEIDYFTNNNIIIKDIACGNSFSAALSNNGEVYVW 267
Query: 64 GGCQAGQLGLGPQT---RSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG+ S PN+ + NI I +L+ACG +H +
Sbjct: 268 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKI-------KLIACGDNHMIACSES 320
Query: 120 GKIHGWG 126
I+ WG
Sbjct: 321 NIIYFWG 327
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
W G G S+++G+K LP ++ + I ++ G H A G +Y +G
Sbjct: 40 WRWGCSGDSLFSSMRAGEKNTLPEKIPNFENKQINKLSAGCSHA-AFIVDGKIYTYGLND 98
Query: 68 AGQLGL-----GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G + S P E + +NI + V CG+ HTL + +
Sbjct: 99 KGQLGRTVSNGGGKESKISLTPEEIELDDKNIKF-------KDVCCGYKHTLAVDVNNDL 151
Query: 123 HGWGY 127
+ WG+
Sbjct: 152 YSWGW 156
>gi|237844347|ref|XP_002371471.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211969135|gb|EEB04331.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221481252|gb|EEE19649.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1858
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D + IK V+CG H +T G ++ +G ++GQ G+ P+ S + +E +F +
Sbjct: 257 IDKMVIKQVSCGASHLACVTDSGRVFTYGSNESGQRGMAPENPKSSRLADE--VFFSS-- 312
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ V+CG +TLV + DG+++G G S+G + + P+ +++ V
Sbjct: 313 ------QAKQVSCGPRYTLVVLDDGRVYGMGDGSHGVLGDVANKIVRVPTKINFQDRRVS 366
Query: 156 KLAAGGGHSAVLTD 169
+AAG H+ +TD
Sbjct: 367 FVAAGMSHALAITD 380
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G GS G LG + +K + + + VA G H A+T G+ YAWG
Sbjct: 333 VYGMGDGSHGVLGDVA----NKIVRVPTKINFQDRRVSFVAAGMSHALAITDLGSTYAWG 388
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLGLG T R P +V + ++ H+ ++ ++ K+
Sbjct: 389 RNDCGQLGLG-------------HTDDRCTPQVVCELSGHKTVMVAAHTASVALTKERKL 435
Query: 123 HGWGYNS 129
+ WG NS
Sbjct: 436 YAWGTNS 442
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLGH ++ D +P+ + +L G ACG HT ALT G++YA+G
Sbjct: 162 LWSWGRNDKGQLGHGDIKRID---VPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG +T + +P+ + + PI VACG +++ G ++
Sbjct: 219 ENKMGQLGLGNKTDA---VPSPAQILYNGQPIT-------KVACGAEFSMIMDCKGNLYS 268
Query: 125 WGYNSYGQ 132
+G YGQ
Sbjct: 269 FGCPEYGQ 276
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L G+ ++ VA G H+ +T +G L++WG GQLG G
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG------------- 176
Query: 88 DTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
D ++P L+ G V ACG +HTL +G ++ +G N GQ T A P
Sbjct: 177 DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VP 235
Query: 145 SPVDWCVG--EVRKLAAGGGHSAVL 167
SP + K+A G S ++
Sbjct: 236 SPAQILYNGQPITKVACGAEFSMIM 260
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G +GQLG + D P +++ +G I VACG + + KG LY++G
Sbjct: 214 VYAFGENKMGQLGLGN--KTDAVPSPAQIL-YNGQPITKVACGAEFSMIMDCKGNLYSFG 270
Query: 65 GCQAGQLGL---GPQTRSFSFIPNESDTYFRNIPILV----------VPN-GVQLVACGH 110
+ GQLG G I + + R I I + VPN V+ +ACG
Sbjct: 271 CPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGI 330
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+H+L+ ++ WG+ YG+
Sbjct: 331 NHSLILDSQKRVFSWGFGGYGR 352
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+ RR+ + + + ++
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVR 324
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
D+ACG H+ L S+ +++WG G+LG Q +P R + + P
Sbjct: 325 DIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--EMVP-------RLVKLFDFPGR 375
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + G + + G + WG A N YP V D C +VR LA G
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACG 429
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 430 KSSIIVAADESTI 442
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG QLG+ + G L P V L G + +VACG HT ALT+ G ++A
Sbjct: 95 EVFSWGHNGYSQLGNGTTNHG---LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +GQ+G G + P + +N V +ACG ++ + G+I
Sbjct: 152 WGYNNSGQVGSGSTANQPT--PRRVSSCLQN-------KAVVNIACGQLCSMAVLDSGEI 202
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+GWGYN GQ + P + G V ++A G H+ LTD
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTD 250
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 104/236 (44%), Gaps = 45/236 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG GQLG L + + P R+ AL G+ + VACG HT ALT +G +YAW
Sbjct: 201 EIYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G + + +P L+ + ++ AC SHT +
Sbjct: 258 GANSYGQLGTGNKCN-------------QALPTLINTDKERMAEVAACHTSHTSAAKTQS 304
Query: 120 GKIHGWGYNSYGQA---------ANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTD 169
G++ WG GQA ++ +A + +P V W + + LT
Sbjct: 305 GQVLMWG-QCRGQAVASPHLTHFSSTDDVFACFATPAVTWHLLSIDT-------EDYLTV 356
Query: 170 ACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARL-CERLREHLLHGDEFDC 224
A SLK+ EF +S +S+ + D +AL ++ CE R L DE DC
Sbjct: 357 AQSLKK--EF---DSPEISDLKFLVDGKCIHVHKALLKIRCEHFRSLLNESDE-DC 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG LQS + PRR+ AL G I ++ G G H T+ G +++
Sbjct: 42 EVFALGTNCSGCLGLGDLQS---TIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + P LV N V VACG HT+
Sbjct: 99 WGHNGYSQLGNGTTNHGLT-------------PALVSTNLLGKRVIEVACGSHHTIALTT 145
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCE 178
DG++ WGYN+ GQ + + A P+P R++++ + AV+ AC +LC
Sbjct: 146 DGEVFAWGYNNSGQVGS--GSTANQPTP--------RRVSSCLQNKAVVNIACG--QLCS 193
Query: 179 FRLAES 184
+ +S
Sbjct: 194 MAVLDS 199
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG QLG+ + G L P V L G + +V+CG HT ALT+ G +YA
Sbjct: 95 EVYAWGHNGYSQLGNGTTNHG---LTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYA 151
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +GQ+G G + P + +N VV N +ACG ++ + +G+
Sbjct: 152 WGYNNSGQVGSGSTANQPT--PRRVSSCLQN---KVVVN----IACGQLCSMAVLDNGET 202
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+GWGYN GQ + P + G + ++A G H+ LTD
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTD 250
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + PRRV + L + ++ACG + + A+ G Y
Sbjct: 148 EVYAWGYNNSGQVGSGSTAN---QPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG N + I L N +Q VACG++HTL +G +
Sbjct: 205 WGYNCNGQLGLGN---------NGNQQTPCRIAALQGINIIQ-VACGYAHTLALTDEGFV 254
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + P+ ++ + ++AA
Sbjct: 255 YSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEVAA 291
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ Y WG GQLG L + + P R+ AL GI I VACG HT ALT +G +Y+W
Sbjct: 201 ETYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + V++ AC SHT + G++
Sbjct: 258 GANSYGQLGTG----------NKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQSGQV 307
Query: 123 HGWG 126
WG
Sbjct: 308 LMWG 311
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG QS + PRR+ L G I ++ G G H T+ G +YA
Sbjct: 42 EVFALGTNCSGCLGLGDTQS---TIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + P LV N V V+CG HT+
Sbjct: 99 WGHNGYSQLGNGTTNHGLT-------------PALVSTNLIGKRVTEVSCGSHHTIALTT 145
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
DG+++ WGYN+ GQ + + P V C+
Sbjct: 146 DGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCL 178
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+T ++A G +G LGLG +S R I IL + L H
Sbjct: 37 VTVNDEVFALGTNCSGCLGLGD---------TQSTIEPRRIDILCGKKIISLSYGTGPHV 87
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGE-VRKLAAGGGHSAVLT 168
++ DG+++ WG+N Y Q N + + P+ V +G+ V +++ G H+ LT
Sbjct: 88 VIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALT 144
>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 480
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WGL G C S D EL P V +L GI I+ VA G HT ++ G +YA+GG
Sbjct: 327 FGWGL-----YGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGG 381
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G ++++T R + + N V+ ++CG HT + +GK+
Sbjct: 382 NQFGQLGTG---------GDQAETIPRLLDCPSLENVNVKRISCGARHTALITDNGKVFC 432
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 433 WGWNKYGQ 440
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 10 LGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
+ S Q S S D + LP V G+ I VA GG HT AL+ G ++ WG
Sbjct: 193 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 252
Query: 69 GQLGLGPQTRSFS---FIP-NESDTYFRNIPILV-------------VPNG-VQLVACGH 110
GQLGLG + R S +P S +Y ++I + VP ++ +ACG
Sbjct: 253 GQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRVPGSYIKGIACGG 312
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
H+ V G + +G+ YGQ + P+ V +G + +AAG H+
Sbjct: 313 RHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHT 367
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG GS G+LGH + + LLP V L G + DVACG HT A+ G ++
Sbjct: 583 ELYTWGRGSYGRLGH---GNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVW 639
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+WG G+LG G +P +T + +V V CG ++ +DG
Sbjct: 640 SWGDGDYGKLGRGGS--DCCKVPKVVETLKHHNKYIVN------VLCGSQFSVALGKDGT 691
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+ WG + + + + YP V+ + + +A G H LTD C +
Sbjct: 692 VWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQI 744
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LGH GD P V L I +ACG ++ A+TS G LY WG
Sbjct: 534 VYSWGSGDGGRLGH-----GDIRREPELVKELVNKKITQIACGSTYSAAVTSNGELYTWG 588
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGH--SHTLVYMRD 119
G+LG G N D R +P LV + V VACG +HTL +D
Sbjct: 589 RGSYGRLGHG----------NSED---RLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKD 635
Query: 120 GKIHGWGYNSYGQ 132
G + WG YG+
Sbjct: 636 GIVWSWGDGDYGK 648
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+ ++++WG G G+LGH GDK PR++ AL G I ++CG H+ A+TSKG
Sbjct: 3875 NFEVFSWGDGEDGKLGH-----GDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGE 3929
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYM 117
LY WG + G+LG G E+ ++ I VACG + TL
Sbjct: 3930 LYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVID----------VACGSGDAQTLAIT 3979
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D + WG YG+ S P ++ +G V K+ G S LT
Sbjct: 3980 DDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALT 4031
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD + L P++V AL + D+ACG T ALT
Sbjct: 3028 ELYTWGLGDYGRLGH-----GDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G IP + D + V +ACG +L
Sbjct: 3083 VWSWGDGDFGKLGRGGS--EGCNIPQKIDA--------LCGRDVCRIACGAQFSLALSTT 3132
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTDA 170
GK+ WG Y + + ++ P ++ + + R ++A G H +TD
Sbjct: 3133 GKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDT 3185
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + +P+++ AL G + +ACG + AL++ G ++ WG
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCN---IPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWG 3139
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+LG G +D+++R+ ++ P + +A G H L G+
Sbjct: 3140 KGDYYRLGHG------------NDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGE 3187
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHS 164
++ WG N +GQ N +T P C+GE + +A G HS
Sbjct: 3188 VYSWGDNDHGQQGNGNTTVNKRPQ---ICLGELDGVKISHIACGSSHS 3232
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + S L P + AL+ I ++ACG H+ A+T+ G LY WG
Sbjct: 2977 VFSWGEGIDGKLGHGDVTS---RLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWG 3033
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
G+LG G D+ +IP V V +ACG + TL +
Sbjct: 3034 LGDYGRLGHG-------------DSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDN 3080
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLT 168
+ WG +G+ S P +D C +V ++A G S L+
Sbjct: 3081 NCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALS 3130
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G +LGH + D PR+V L G I VA G +H A T G ++ W
Sbjct: 4035 DLYTWGKGDYYRLGH---GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTW 4091
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G GQLG G + + IP + ++ V V+L V CG +H+ + +
Sbjct: 4092 GDNDEGQLGNG----TLNPIPEPT--------LVTVLENVKLNRVGCGSAHSFAWSTEAP 4139
Query: 122 I 122
I
Sbjct: 4140 I 4140
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + + +P ++ L+ F+K V GG H+ +T +G +++
Sbjct: 2923 VYVSGEGANGRLG---LGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFS 2979
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLVYMRD 119
WG G+LG G T S P L+ +L +ACG SH+ D
Sbjct: 2980 WGEGIDGKLGHGDVTSRLS-------------PTLIEALESKLIVEIACGSSHSAAVTAD 3026
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPV 147
G+++ WG YG+ + S P V
Sbjct: 3027 GELYTWGLGDYGRLGHGDSKTLHIPKQV 3054
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WGL GQLG C G K P + + + +A G +T G +Y G
Sbjct: 2871 VFVWGLNDKGQLGGC---KGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG T + S IP + DT + V V G H+L R+GK+
Sbjct: 2928 EGANGRLGLG-NTENIS-IPVQLDTLNMHFVKKVT------VHPGGRHSLCITREGKVFS 2979
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG G+ + T P+ ++ + + ++A G HSA +T
Sbjct: 2980 WGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVT 3024
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG K P R+ +L G+ + V CG + ALT G LY WG
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKK---PLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWG 4040
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R + G Q+ VA G H + G++
Sbjct: 4041 KGDYYRLGHG------------TNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEV 4088
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
WG N GQ N T P P V E KL G SA
Sbjct: 4089 FTWGDNDEGQLGN--GTLNPIPEPTLVTVLENVKLNRVGCGSA 4129
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + +L I IK +A G H AL+S G +Y+WG G+LG G R +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKE-- 559
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
+V + +ACG +++ +G+++ WG SYG+ + S P+ V
Sbjct: 560 ----------LVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLV 609
Query: 148 DWCVGE-VRKLAAGGGHSAVL 167
G V +A G G + L
Sbjct: 610 AGLSGSHVVDVACGSGDAHTL 630
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V GG H LTS +++WG + G+LG G + S + P R I L+ G
Sbjct: 3862 VHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSET--P-------RKIEALL---GK 3909
Query: 104 QLV--ACGHSHTLVYMRDGKIHGWGYNSYGQ 132
Q+V +CG SH+ G+++ WG YG+
Sbjct: 3910 QIVHISCGSSHSAAITSKGELYTWGKGRYGR 3940
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG +LGH +L D P+ V L I D+A G H ALT ++ WG
Sbjct: 692 VWTWGKSDGYRLGHGTL---DHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748
>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
Length = 1800
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 29/194 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV--------ALDGIF----IKDVACGGVHT 51
D+Y WG + GQLG+ + + P ++ D I+ ++ G HT
Sbjct: 146 DLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHT 205
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFR---------------NIPI 96
A+++ GA+++WG Q GQLGLG +P D F +
Sbjct: 206 IAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTA 265
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EV 154
+ V +ACG+ H+ + +G + WG N YGQ S P V + ++
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKI 325
Query: 155 RKLAAGGGHSAVLT 168
++A G H+ +LT
Sbjct: 326 NRMALGNNHTILLT 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 22/155 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++ G GQLG +++ +P V L + + G + A+T G LY WG
Sbjct: 95 IFSMGFNQTGQLG---IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWG 151
Query: 65 GCQAGQLGLG----------PQTRSFSFIPN--ESDTYFRNIPILVVPNGVQLVACGHSH 112
GQLG G P T IP+ + D ++N+ + G Q H
Sbjct: 152 SSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQ-------H 204
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
T+ G I WG N YGQ P P+
Sbjct: 205 TIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPI 239
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 49/159 (30%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLP----------RRVVALDGI------------- 39
I++WG GQLG HC + +L+P RR ++ +
Sbjct: 214 IFSWGSNQYGQLGLGHC-----NAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTI 268
Query: 40 --FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ D+ACG H+ LT +G L+ WG Q GQLG G D+ +++P
Sbjct: 269 HRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQG-------------DSLDQSVPKT 315
Query: 98 VVPN----GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V + + +A G++HT++ ++ + +G N + Q
Sbjct: 316 VKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQ 354
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G G H + DK+ P L + + ++ G H+ A+ + L WG
Sbjct: 4 LYTWGKGKTGNTCH----NIDKKY-PSPPSVLISLNLDQLSMGPNHSAAIVNNECL-MWG 57
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ + T F+ +V V V+CG +HTL+ + KI
Sbjct: 58 ----------------EVMGRKHTTLFK----IVWKRRVVSVSCGFNHTLLLTSEYKIFS 97
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G+N GQ E + P PVD V K+ AG SA +T+A L
Sbjct: 98 MGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDL 147
>gi|391344575|ref|XP_003746571.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 293
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G GS GQ G L S D+EL P + L+ + I V+ GG H+ A++ +G LY WG
Sbjct: 142 VFVYGDGSRGQRGSGDL-SADEELRP--LAHLEDLDITHVSAGGWHSAAISDRGYLYQWG 198
Query: 65 GCQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
Q GQ G GP+ +R+ +P D R ++ V CG HT+V DG++
Sbjct: 199 WNQHGQCG-GPRGDSRNVVGLPELRDVGIR----------LRDVRCGSRHTVVLTDDGRL 247
Query: 123 HGWGYNSYGQAANEKST 139
WG++ +GQ + T
Sbjct: 248 LSWGWDDFGQCSKIDRT 264
>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
Length = 1073
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++++WG G+ QLG +G+ + LP +V AL G +IK VA H+ A++S G L
Sbjct: 152 MEVFSWGSGTNYQLG-----TGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSSDGEL 206
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G+LG P S + R + + + V +VA HT++ G
Sbjct: 207 YTWGFGRGGRLG-HPDIHSGQ---TTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ WG N GQ P V + +AA HSA + D
Sbjct: 263 ELFTWGSNREGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVAD 311
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + PRRV +L I VA H+ A+ G ++ W
Sbjct: 263 ELFTWGSNREGQLGYPSV---DTQPTPRRVSSLKARII-SVAAANKHSAAVADTGEVFTW 318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + + IP + Y + + V+ HT+ DG++
Sbjct: 319 GSNKEGQLGYGTSNSASNCIPRMVE-YLKG-------KAFKCVSAAKYHTVALGTDGEVF 370
Query: 124 GWGY 127
WG+
Sbjct: 371 TWGH 374
>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
Length = 1800
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 29/194 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV--------ALDGIF----IKDVACGGVHT 51
D+Y WG + GQLG+ + + P ++ D I+ ++ G HT
Sbjct: 146 DLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHT 205
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFR---------------NIPI 96
A+++ GA+++WG Q GQLGLG +P D F +
Sbjct: 206 IAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTA 265
Query: 97 LVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EV 154
+ V +ACG+ H+ + +G + WG N YGQ S P V + ++
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKI 325
Query: 155 RKLAAGGGHSAVLT 168
++A G H+ +LT
Sbjct: 326 NRMALGNNHTILLT 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 22/155 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++ G GQLG +++ +P V L + + G + A+T G LY WG
Sbjct: 95 IFSMGFNQTGQLG---IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWG 151
Query: 65 GCQAGQLGLG----------PQTRSFSFIPN--ESDTYFRNIPILVVPNGVQLVACGHSH 112
GQLG G P T IP+ + D ++N+ + G Q H
Sbjct: 152 SSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQ-------H 204
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
T+ G I WG N YGQ P P+
Sbjct: 205 TIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPI 239
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 49/159 (30%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLP----------RRVVALDGI------------- 39
I++WG GQLG HC + +L+P RR ++ +
Sbjct: 214 IFSWGSNQYGQLGLGHC-----NAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTI 268
Query: 40 --FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ D+ACG H+ LT +G L+ WG Q GQLG G D+ +++P
Sbjct: 269 HRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQG-------------DSLDQSVPKT 315
Query: 98 VVPN----GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V + + +A G++HT++ ++ + +G N + Q
Sbjct: 316 VKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQ 354
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G G H + DK+ P L + + ++ G H+ A+ + L WG
Sbjct: 4 LYTWGKGKTGNTCH----NIDKKY-PSPPSVLISLNLDQLSMGPNHSAAIVNNECL-MWG 57
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ + T F+ +V V V+CG +HTL+ + KI
Sbjct: 58 ----------------EVMGRKHTTLFK----IVWKRRVVSVSCGFNHTLLLTSEYKIFS 97
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G+N GQ E + P PVD V K+ AG SA +T+A L
Sbjct: 98 MGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDL 147
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYAW 63
++ WG QLG+ + KE V + GI +K +A G +T L + G ++AW
Sbjct: 297 VWAWGDNEHDQLGNETT----KEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTVWAW 352
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDG 120
G + G+LG G SF+ P+ V NG V+ +A G HT+V DG
Sbjct: 353 GVNEYGKLGDGTTNNSFT-------------PVQV--NGISNVKAIAAGAYHTVVLKNDG 397
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ WGYN YG+ N + + P V + +V+ +AAG H+ L +
Sbjct: 398 TVWTWGYNHYGELGNGTTVDSSTPVQVK-GISDVKAIAAGACHTVALKN 445
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV- 99
+K +A G HT AL + G ++AWG GQLG G T R IP+ V
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTN-------------RTIPVQVKG 274
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLA 158
+ V +A G HT+ DG + WG N + Q NE + ++ +PV + +V+ +A
Sbjct: 275 ISDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIA 334
Query: 159 AGGGHSAVLTD 169
AG ++ VL +
Sbjct: 335 AGASYTVVLKN 345
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ G+LG + + P +V + + K +A G HT L + G ++ WG
Sbjct: 349 VWAWGVNEYGKLGDGTT---NNSFTPVQVNGISNV--KAIAAGAYHTVVLKNDGTVWTWG 403
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
G+LG G S + P+ V + V+ +A G HT+ DG +
Sbjct: 404 YNHYGELGNGTTVDS-------------STPVQVKGISDVKAIAAGACHTVALKNDGTVW 450
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDW 149
WG N YG+ N + + P V W
Sbjct: 451 AWGCNYYGELGNGTAVDSSTPVQVKW 476
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG + GQLG L + PR+V A+ + ++CG T A+ G +Y W
Sbjct: 168 VYTWGQNNCGQLG---LSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVW 224
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGLG T + F + F ++ VACG SHTL +G +
Sbjct: 225 GSNGNGQLGLGSLTNQPFPVKIEQLKDVF-----------IKKVACGFSHTLALTDEGLV 273
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG N+ GQ E T P + G + ++AA
Sbjct: 274 YVWGANALGQLGTENKTNQSIPVLMKTIHGRINEVAA 310
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG SL + + P ++ L +FIK VACG HT ALT +G +Y W
Sbjct: 220 EVYVWGSNGNGQLGLGSLTN---QPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVW 276
Query: 64 GGCQAGQLGLGPQT 77
G GQLG +T
Sbjct: 277 GANALGQLGTENKT 290
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG Q+G+ + +L D + +ACGG H+ T G +Y W
Sbjct: 117 EVYGWGHNGYSQVGNDQNSQANSPVL-----VFDRQPVAQIACGGYHSVIRTVSGGVYTW 171
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S P R + + ++CGH+ T G+++
Sbjct: 172 GQNNCGQLGLSASVNHQS--P-------RKVGGAIAEMKCTGISCGHNFTTAVFDTGEVY 222
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N GQ T +P ++ ++K+A G H+ LTD
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTD 269
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 28 LLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNE 86
L P +V L ++ ACG G H ALT++G +Y WG Q+G +++
Sbjct: 85 LSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQVGNDQNSQA------- 137
Query: 87 SDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
N P+LV V +ACG H+++ G ++ WG N+ GQ S P
Sbjct: 138 ------NSPVLVFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVNHQSPR 191
Query: 146 PVDWCVGEVRKLAAGGGHS 164
V + E++ GH+
Sbjct: 192 KVGGAIAEMKCTGISCGHN 210
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH-SH 112
+T + ++A G AG LG+G TRS P + + + GVQ ACG H
Sbjct: 59 VTEEDEVWAMGSNAAGCLGIG-DTRS-CLSPTKVEGLSKK--------GVQSFACGTGPH 108
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
L G+++GWG+N Y Q N++++ A P V + V ++A GG HS + T
Sbjct: 109 VLALTARGEVYGWGHNGYSQVGNDQNSQANSPVLV-FDRQPVAQIACGGYHSVIRT 163
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + G+LG+ + + +P +V L + K +A G H AL G+++AWG
Sbjct: 875 VWSWGQNTYGELGNGTTT---RSSVPVQVALLTDV--KAIAAGDYHGVALKKDGSVFAWG 929
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG S T ++ P+ G++ +A G HTL DG +
Sbjct: 930 YNGNGELG-------------NSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 976
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WGYN YGQ N +T P+ + + + +AAG S
Sbjct: 977 WGYNGYGQLGNGNNTSRSVPAAIP-GLASIASIAAGENQS 1015
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + S +P +V+ L G+ K +A G HT AL S G L+ WG
Sbjct: 725 VWGWGYNGHGQLGTGTSNSTS---VPGKVINLTGM--KMIAGGENHTVALRSDGTLHTWG 779
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG T +S + + T + V+ G +H+L DG +
Sbjct: 780 YNGYGQLGDDSTTTRYSPVQVSTLTNW------------TAVSAGENHSLALKSDGTVWA 827
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+GYN YGQ + ++ P V G V +AAG S L
Sbjct: 828 FGYNGYGQLGDGTTSSQRTPVQVKDLTGVV-AIAAGKDFSLAL 869
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA 107
G HT + S G ++ WG GQLG G T + + +P + ++ G++++A
Sbjct: 713 GNHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGK----------VINLTGMKMIA 760
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G +HT+ DG +H WGYN YGQ ++ +T + P V + ++AG HS L
Sbjct: 761 GGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVS-TLTNWTAVSAGENHSLAL 819
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG+ S S + + GI K +A G HT AL S G +++WG
Sbjct: 925 VFAWGYNGNGELGNSSTISQSTPVQS----GVTGI--KGIAAGPYHTLALKSDGTVWSWG 978
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G T R++P +P + +A G + ++ Y DG +
Sbjct: 979 YNGYGQLGNGNNTS-------------RSVPA-AIPGLASIASIAAGENQSIAYGNDGIL 1024
Query: 123 HGWGYNSYGQAAN 135
+ WG N+ GQ N
Sbjct: 1025 YSWGRNANGQLGN 1037
>gi|124804612|ref|XP_001348055.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
gi|23496310|gb|AAN35968.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
Length = 425
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 5 IYTWGLGSVGQLGHC---SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
I+T+GL GQLG + +S + L+P+ V + I +V CG HT A+ LY
Sbjct: 92 IFTYGLNDKGQLGRTLDGNEKSQNYSLIPKEVKTNEDIKFTNVCCGYKHTLAIDENNELY 151
Query: 62 AW---GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+W G G GLG ++ IP +T F+N + ++CG H+L +
Sbjct: 152 SWGWGGNLFKGANGLGQGNKNNINIPKRVET-FKNEDSEFIN-----ISCGEQHSLALTK 205
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLT 168
+GK++G G +G+ + +D+ V E++ ++ G SA L+
Sbjct: 206 NGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVSNNIEIKDISCGHSFSAALS 258
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL---DGIFIKDVACGGVHTCALTSKG 58
++Y+WG G G L G+K + P+RV D FI +++CG H+ ALT G
Sbjct: 149 ELYSWGWGGNLFKGANGLGQGNKNNINIPKRVETFKNEDSEFI-NISCGEQHSLALTKNG 207
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 116
+Y G + G+LG G F E YF V N +++ ++CGHS +
Sbjct: 208 KVYGCGKGEFGRLGKGNHGDQLFF---EEIDYF-------VSNNIEIKDISCGHSFSAAL 257
Query: 117 MRDGKIHGWGYNSYGQAANEKS-----TYAWYPSPVDWCVGE---VRKLAAGGGHSAVLT 168
++G ++ WG N YGQ E S ++ YP+ V + E ++ +A G H
Sbjct: 258 SKNGDVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKYIACGDNHMI--- 314
Query: 169 DACSLKELCEF 179
ACS + F
Sbjct: 315 -ACSENNIIYF 324
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y G G G+LG + GD+ + I IKD++CG + AL+ G +Y W
Sbjct: 209 VYGCGKGEFGRLGKGN--HGDQLFFEEIDYFVSNNIEIKDISCGHSFSAALSKNGDVYVW 266
Query: 64 GGCQAGQLGLGPQT---RSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG+ S PN+ + NI I + +ACG +H + +
Sbjct: 267 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKI-------KYIACGDNHMIACSEN 319
Query: 120 GKIHGWG 126
I+ WG
Sbjct: 320 NIIYFWG 326
>gi|115470737|ref|NP_001058967.1| Os07g0165200 [Oryza sativa Japonica Group]
gi|113610503|dbj|BAF20881.1| Os07g0165200, partial [Oryza sativa Japonica Group]
Length = 754
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++++WG G+ QLG +G+ + LP +V AL G +IK VA H+ A++S G L
Sbjct: 152 MEVFSWGSGTNYQLG-----TGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSSDGEL 206
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y WG + G+LG P S + R + + + V +VA HT++ G
Sbjct: 207 YTWGFGRGGRLG-HPDIHSGQ---TTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
++ WG N GQ P V + +AA HSA + D
Sbjct: 263 ELFTWGSNREGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVAD 311
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + PRRV +L I VA H+ A+ G ++ W
Sbjct: 263 ELFTWGSNREGQLGYPSV---DTQPTPRRVSSLKARII-SVAAANKHSAAVADTGEVFTW 318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + + IP + Y + + V+ HT+ DG++
Sbjct: 319 GSNKEGQLGYGTSNSASNCIPRMVE-YLKG-------KAFKCVSAAKYHTVALGTDGEVF 370
Query: 124 GWGY 127
WG+
Sbjct: 371 TWGH 374
>gi|221501947|gb|EEE27698.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1819
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
+D + IK V+CG H +T G ++ +G ++GQ G+ P+ S + +E +F +
Sbjct: 257 IDKMVIKQVSCGASHLACVTDSGRVFTYGSNESGQRGMAPENPKSSRLADE--VFFSS-- 312
Query: 96 ILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+ V+CG +TLV + DG+++G G S+G + + P+ +++ V
Sbjct: 313 ------QAKQVSCGPRYTLVVLDDGRVYGMGDGSHGVLGDVANKIVRVPTKINFQDRRVS 366
Query: 156 KLAAGGGHSAVLTD 169
+AAG H+ +TD
Sbjct: 367 FVAAGMSHALAITD 380
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y G GS G LG + +K + + + VA G H A+T G+ YAWG
Sbjct: 333 VYGMGDGSHGVLGDVA----NKIVRVPTKINFQDRRVSFVAAGMSHALAITDLGSTYAWG 388
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLGLG T R P +V + ++ H+ ++ ++ K+
Sbjct: 389 RNDCGQLGLG-------------HTDDRCTPQVVCELSGHKTVMVAAHTASVALTKERKL 435
Query: 123 HGWGYNS 129
+ WG NS
Sbjct: 436 YAWGTNS 442
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
DIYTWG G+ G LGH +E P V AL G I+ VACG HT AL+ G +++W
Sbjct: 208 DIYTWGEGTNGMLGH---GEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSW 264
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY---MRDG 120
G G+LG G F+ I I L N Q VAC H+ + G
Sbjct: 265 GSGYGGRLGQGHLRDRFTPI---------RICGLESLNLTQ-VACNEFHSAAVCACSKQG 314
Query: 121 KIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
+ +G N YGQ +K ++ ++ ++A G HSA L + SL
Sbjct: 315 ALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSL 369
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G GQLG DK L + V +L I VACG H+ AL G+L+
Sbjct: 316 LFSFGENDYGQLG----IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWL 371
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG ++GQLG G T + E+ R+ + V VACG H+ + G++
Sbjct: 372 WGCNESGQLGNGNYTSTSLPSLLEAGNDLRH-------DAVMEVACGDQHSAFITKKGRM 424
Query: 123 HGWGYNSYGQAA-------NEKSTY---AWYPSPVDW-CVGEVRKLAAGGGHSAVLTD 169
G N+YGQ ++ TY P D+ CV +A G H+AV+TD
Sbjct: 425 FCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCV----HVACGDSHTAVVTD 478
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++ WG GQLG+ + S L L + +VACG H+ +T KG ++
Sbjct: 366 HGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMF 425
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMR 118
G GQLG N+ D N+ + V VP + V ACG SHT V
Sbjct: 426 CCGDNTYGQLGA-------HLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTD 478
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSA 165
G+I WG G+ + + P+ ++ + VR ++ G H+A
Sbjct: 479 GGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTA 527
>gi|146083222|ref|XP_001464682.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068776|emb|CAM59710.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1172
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +++TWG+G G+LGH S L R AL+G + DVACG HT ALT+ GA++
Sbjct: 737 HGELFTWGVGYQGRLGHGSKAPAYVPTLVRG--ALEGHRVVDVACGSFHTVALTAAGAVF 794
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
WG +GQ G + + P+ +R + + V GV + +ACG HT+V M
Sbjct: 795 CWGDNASGQCG------TTAGSPDAFTAPYRVVGLEYVAGGVARSIACGRQHTVVVM 845
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + D+ V G+ + ++A G ++CAL+ G++Y +G
Sbjct: 465 LFSWGSGGNGELGTHATR--DEPTPTMAQVTPFGVRVCEIALGANYSCALSDTGSIYTFG 522
Query: 65 GCQAGQLGLG----------PQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL-------- 105
+ GQLGLG N + ++P+ L++P + L
Sbjct: 523 NGEWGQLGLGGSGCAVRGGSSPPGGGVGGGNGTGQDGVDVPVELLIPRRIPLFEQLPAVH 582
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
VA G++ + + ++ WG N++GQ+ ++ + VD V
Sbjct: 583 VAAGYAFAMAIVEGHHVYFWGNNNHGQSGRGRAHFDLPTKKVDAPV 628
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 29/192 (15%)
Query: 31 RRVVALDGIFIK------DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
RR VA G + + G H+ A+ G L+ WG G+LG G +++ +++P
Sbjct: 705 RRRVAPGGAAVTAPERIVRIRAGQWHSGAINEHGELFTWGVGYQGRLGHG--SKAPAYVP 762
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
T R + + V VACG HT+ G + WG N+ GQ + +
Sbjct: 763 ----TLVRGA---LEGHRVVDVACGSFHTVALTAAGAVFCWGDNASGQCGTTAGSPDAFT 815
Query: 145 SP-----VDWCVGEV-RKLAAGGGHSAVLTDACS---LKELCEFRLAESVTLSNAS---- 191
+P +++ G V R +A G H+ V+ + + C AES S+A
Sbjct: 816 APYRVVGLEYVAGGVARSIACGRQHTVVVMEGPQPWCPQPCCRADAAESGCHSHAQVYCF 875
Query: 192 -EIEDVASRTGS 202
E A+ TGS
Sbjct: 876 GEATRTANATGS 887
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG + GQ G H L + K P V L+G I ++CG AL+ G L
Sbjct: 599 VYFWGNNNHGQSGRGRAHFDLPT-KKVDAPVLVDTLEGKRIIQLSCGSFFALALSDDGFL 657
Query: 61 YAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRN----IPILVVPNGVQLVACGHS---- 111
Y+WG LG + R + + ES + R P LV G + VA G +
Sbjct: 658 YSWGLVDCVGLGTPEEVERRYRDVLGESLSNERRAVVLTPQLVTVKGRRRVAPGGAAVTA 717
Query: 112 -HTLVYMRDGKIHGWGYNSYGQ 132
+V +R G+ H N +G+
Sbjct: 718 PERIVRIRAGQWHSGAINEHGE 739
>gi|300122796|emb|CBK23812.2| unnamed protein product [Blastocystis hominis]
Length = 797
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 4 DIYTWGLGSVGQLG--HCSLQSGDK---ELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++Y+WG G G+LG QS + LLPR++V VACG H AL S+G
Sbjct: 158 ELYSWGDGPAGELGLGEPVRQSQAEIVVRLLPRQIV--------KVACGASHVLALDSEG 209
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLV 115
AL+AWGG Q GQLGLG D R P+ VV Q +A G + V
Sbjct: 210 ALFAWGGNQFGQLGLG-------------DRRNRAEPVRVVALKKQHIVDIAAGDGFSAV 256
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G + G N GQ + S PS V + LA G H L
Sbjct: 257 LDDHGVVWTMGLNELGQCGSNASREVGIPSAVRQVPSAAQSLACGQSHVLAL 308
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ +V G + AL + G LY+WG AG+LGLG R ++++ R +P +V
Sbjct: 140 LAEVKTTGKASFALATTGELYSWGDGPAGELGLGEPVRQ-----SQAEIVVRLLPRQIVK 194
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAA 159
VACG SH L +G + WG N +GQ ++ A V + +AA
Sbjct: 195 -----VACGASHVLALDSEGALFAWGGNQFGQLGLGDRRNRAEPVRVVALKKQHIVDIAA 249
Query: 160 GGGHSAVLTD 169
G G SAVL D
Sbjct: 250 GDGFSAVLDD 259
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++T+G G GQLGH G++ L L VV LD + K+VA GG H ALT G ++W
Sbjct: 266 LFTFGNGEAGQLGH-----GERGLCLEPSVVPLDNV--KEVAAGGAHMLALTKDGQAWSW 318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LG G + F+ E IP L GV V+ G H+L G+++
Sbjct: 319 GWGEDGRLGHGA---TEDFLKPEP------IPTLGPAVGVVSVSAGGGHSLALTESGQVY 369
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA--GGGHSAVLTDA 170
GWG+N+ G+ + P+ + + + R L A G HS +T A
Sbjct: 370 GWGFNASGRLGLGNESSVMTPTLIK-ALADKRVLRAICGLDHSLFITQA 417
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 47/210 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQ G L + + + LP R+ I DV+CG H+ A++ G ++ W
Sbjct: 160 EVYIWGNSEFGQTG---LGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTW 216
Query: 64 GGCQAGQLG-------LGPQTRS---------------FSFIPNESDTYFRNI------- 94
G GQLG L P+ + F+ + NE++
Sbjct: 217 GYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQ 276
Query: 95 -----------PILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
P +V + V+ VA G +H L +DG+ WG+ G+ + +
Sbjct: 277 LGHGERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLK 336
Query: 144 PSPVDW---CVGEVRKLAAGGGHSAVLTDA 170
P P+ VG V ++AGGGHS LT++
Sbjct: 337 PEPIPTLGPAVGVV-SVSAGGGHSLALTES 365
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S G ++ + P + I + G H AL+ G +Y W
Sbjct: 107 ELYYWG--SSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIW 164
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ GLG + I E +FR+ I+ V+CG H+ +DG++
Sbjct: 165 GNSEFGQTGLGNKEAQHLPIRME---FFRDKSIVD-------VSCGLDHSAAVSKDGRVW 214
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE 153
WGY GQ + + P + GE
Sbjct: 215 TWGYGIDGQLGHNGTEDELKPKELTVIRGE 244
>gi|398013382|ref|XP_003859883.1| hypothetical protein, conserved [Leishmania donovani]
gi|322498101|emb|CBZ33176.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1172
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +++TWG+G G+LGH S L R AL+G + DVACG HT ALT+ GA++
Sbjct: 737 HGELFTWGVGYQGRLGHGSKAPAYVPTLVRG--ALEGHRVVDVACGSFHTVALTAAGAVF 794
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
WG +GQ G + + P+ +R + + V GV + +ACG HT+V M
Sbjct: 795 CWGDNASGQCG------TTAGSPDAFTAPYRVVGLEYVAGGVARSIACGRQHTVVVM 845
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + D+ V G+ + ++A G ++CAL+ G++Y +G
Sbjct: 465 LFSWGSGGNGELGTHATR--DEPTPTMAQVTPFGVRVCEIALGANYSCALSDTGSIYTFG 522
Query: 65 GCQAGQLGLG----------PQTRSFSFIPNESDTYFRNIPI-LVVPNGVQL-------- 105
+ GQLGLG N + ++P+ L++P + L
Sbjct: 523 NGEWGQLGLGGSGCAVRGGSSPPGGGVGGGNGTGQDGVDVPVELLIPRRIPLFEQLPAVH 582
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
VA G++ + + ++ WG N++GQ+ ++ + VD V
Sbjct: 583 VAAGYAFAMAIVEGHHVYFWGNNNHGQSGRGRAHFDLPTKKVDAPV 628
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 31 RRVVALDGIFIK------DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
RR VA G + + G H+ A+ G L+ WG G+LG G +++ +++P
Sbjct: 705 RRRVAPGGAAVTAPERIVRIRAGQWHSGAINEHGELFTWGVGYQGRLGHG--SKAPAYVP 762
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
T R + + V VACG HT+ G + WG N+ GQ + +
Sbjct: 763 ----TLVRGA---LEGHRVVDVACGSFHTVALTAAGAVFCWGDNASGQCGTTAGSPDAFT 815
Query: 145 SP-----VDWCVGEV-RKLAAGGGHSAVLTD 169
+P +++ G V R +A G H+ V+ +
Sbjct: 816 APYRVVGLEYVAGGVARSIACGRQHTVVVME 846
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG + GQ G H L + K P V L+G I ++CG AL+ G L
Sbjct: 599 VYFWGNNNHGQSGRGRAHFDLPT-KKVDAPVLVDTLEGKRIIQLSCGSFFALALSDDGFL 657
Query: 61 YAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRN----IPILVVPNGVQLVACGHS---- 111
Y+WG LG + R + + ES + R P LV G + VA G +
Sbjct: 658 YSWGLVDCVGLGTPEEVERRYRDVLGESLSNERRAVVLTPQLVTVKGRRRVAPGGAAVTA 717
Query: 112 -HTLVYMRDGKIHGWGYNSYGQ 132
+V +R G+ H N +G+
Sbjct: 718 PERIVRIRAGQWHSGAINEHGE 739
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+GLG GQLGH + + LP+ V L I V CG HT +T KG LY +
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQ--LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTF 321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G + G+LGLG + + F+P + + VQ VACG H LV+
Sbjct: 322 GDGRHGKLGLGEENFTNQFVPILCSNFLKFT--------VQSVACGGCHMLVF 366
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG L++G P V AL + +CG HT T +G LY+ G
Sbjct: 58 LYVFGSNNWGQLG---LEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG + T F+ I ++ ++ G + + DGK+
Sbjct: 115 GNSEGQLGLGDTS---------GRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFM 165
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ EK P +D +G+ + ++ G HSA +T
Sbjct: 166 WGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVT 208
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G+LG S K P+RV L G +K V+CGG HT A+T K +Y +
Sbjct: 212 ELYTFGEPENGKLGLPS-DKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTEK-EVYTF 268
Query: 64 GGCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G Q GQLG G +F F +P D ++ + V CG +HT V G
Sbjct: 269 GLGQFGQLGHG----TFIFETQLPKAVD--------VLTKKTILYVTCGENHTAVITDKG 316
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL 167
++ +G +G+ + + P+ ++ V+ +A GG H V
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T G LY +G GQLGL + S I + + V
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL----EAGSAISKPTCVK------ALKSEKV 91
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGG 161
+CG +HTL+Y GK++ G NS GQ ++ + + + +++L+AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 162 GHSAVLT 168
SA LT
Sbjct: 152 NTSAALT 158
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S GQLG +KE + +D G I ++CG H+ +T G LY +
Sbjct: 163 LFMWGDNSEGQLGL------EKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTF 216
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LGL P + + V++V+CG HT+ + + +++
Sbjct: 217 GEPENGKLGLPSDKLKKHKKPQR---------VSGLSGKVKIVSCGGEHTIA-VTEKEVY 266
Query: 124 GWGYNSYGQAANEKSTY-AWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+G +GQ + + P VD + + + G H+AV+TD
Sbjct: 267 TFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+GLG GQLGH + + LP+ V L I V CG HT +T KG LY +
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQ--LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTF 321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G + G+LGLG + + F+P + + VQ VACG H LV+
Sbjct: 322 GDGRHGKLGLGEENFTNQFVPILCSNFLKFT--------VQSVACGGCHMLVF 366
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG L++G P V AL + +CG HT T +G LY+ G
Sbjct: 58 LYVFGSNNWGQLG---LEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG + T F+ I ++ ++ G + + DGK+
Sbjct: 115 GNSEGQLGLGDTS---------GRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFM 165
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ EK P +D +G+ + ++ G HSA +T
Sbjct: 166 WGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVT 208
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G+LG S K P+RV L G +K V+CGG HT A+T K +Y +
Sbjct: 212 ELYTFGEPENGKLGLPS-DKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTEK-EVYTF 268
Query: 64 GGCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G Q GQLG G +F F +P D ++ + V CG +HT V G
Sbjct: 269 GLGQFGQLGHG----TFIFETQLPKAVD--------VLTKKTILYVTCGENHTAVITDKG 316
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL 167
++ +G +G+ + + P+ ++ V+ +A GG H V
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T G LY +G GQLGL + S I + + V
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGL----EAGSAISKPTCVK------ALKSEKV 91
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGG 161
+CG +HTL+Y GK++ G NS GQ ++ + + + +++L+AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 162 GHSAVLT 168
SA LT
Sbjct: 152 NTSAALT 158
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S GQLG +KE + +D G I ++CG H+ +T G LY +
Sbjct: 163 LFMWGDNSEGQLGL------EKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTF 216
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LGL P + + V++V+CG HT+ + + +++
Sbjct: 217 GEPENGKLGLPSDKLKKHKKPQR---------VSGLSGKVKIVSCGGEHTIA-VTEKEVY 266
Query: 124 GWGYNSYGQAANEKSTY-AWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+G +GQ + + P VD + + + G H+AV+TD
Sbjct: 267 TFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD 314
>gi|345490923|ref|XP_003426495.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 346
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G+G+ GQLGH L+ D+ P+ + AL G+ I ++ GG H+ +T +G LY WG
Sbjct: 185 VYSVGMGTRGQLGHGDLEDCDE---PKLIEALAGLKIVQISSGGWHSAVVTDQGDLYTWG 241
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG P + +P D F + V ++ CG + T+ K+ G
Sbjct: 242 WNNQGQLG-HPDVENVVAVPKIVD--FIDETEETVEINIKKAQCGSAFTICMTDSDKLWG 298
Query: 125 WGYNSYGQ 132
G N YGQ
Sbjct: 299 CGSNKYGQ 306
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD------GIFIKDVACGGVHTCALTSK 57
D+YTWG + GQLGH ++ + +P+ V +D I IK CG T +T
Sbjct: 236 DLYTWGWNNQGQLGHPDVE--NVVAVPKIVDFIDETEETVEINIKKAQCGSAFTICMTDS 293
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
L+ G + GQLGL P E+ T + + +PN
Sbjct: 294 DKLWGCGSNKYGQLGL----------PREAFTSVKKFVAIKLPN 327
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 20/126 (15%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
T L ++GQ+ + + D E L IFI DVACG HT L G +Y+ G
Sbjct: 142 TVALTNLGQVFNIPISLNDPESL---------IFI-DVACGYDHTLLLAKDGGVYSVGMG 191
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G E + I L VQ ++ G H+ V G ++ WG
Sbjct: 192 TRGQLGHGDL---------EDCDEPKLIEALAGLKIVQ-ISSGGWHSAVVTDQGDLYTWG 241
Query: 127 YNSYGQ 132
+N+ GQ
Sbjct: 242 WNNQGQ 247
>gi|357111495|ref|XP_003557548.1| PREDICTED: uncharacterized protein LOC100828625 [Brachypodium
distachyon]
Length = 1078
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG G+ QLG +G+ + LP +V AL G +IK VA H+ A++S G LY
Sbjct: 153 EVFSWGSGTNYQLG-----TGNAHIQKLPCKVEALHGSYIKTVAASKFHSVAVSSDGELY 207
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + G+LG P +S + R + + + V +VA HT++ G+
Sbjct: 208 TWGFGRGGRLG-HPDIQSGQ---TTAVITPRQVTVGLGRKQVNVVAAAKHHTVIATEAGE 263
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ WG N GQ P V + +AA HSA + D
Sbjct: 264 LFTWGSNREGQLGYPSVDTQATPRRVSSLKQRIISVAAANKHSAAVAD 311
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + PRRV +L I VA H+ A+ G ++ W
Sbjct: 263 ELFTWGSNREGQLGYPSV---DTQATPRRVSSLKQRII-SVAAANKHSAAVADTGEVFTW 318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + + IP + Y + ++ V+ HTLV D ++
Sbjct: 319 GCNKEGQLGYGTSNSASNCIPRMVE-YLKG-------KVLKGVSAAKYHTLVLGADSEVF 370
Query: 124 GWGY 127
WG+
Sbjct: 371 TWGH 374
>gi|154335100|ref|XP_001563790.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060819|emb|CAM37835.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1249
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +++TWG+G G+LGH S L R AL+G + DVACG HT ALT+ GA++
Sbjct: 826 HGELFTWGVGYQGRLGHGSKSPAYVPTLVRG--ALEGHRVVDVACGSFHTVALTAAGAVF 883
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
WG +GQ G + + P+ +R + + V GV + +ACG HT+V M
Sbjct: 884 CWGDNASGQCG------TTAGSPDAFTAPYRVVGLEYVAGGVARSIACGRQHTVVVM 934
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GS G+LG + + D+ V G+ + ++A G ++CAL+ G++Y +G
Sbjct: 556 LFSWGSGSNGELGTHATR--DEPTPTMAQVTPFGVRVCEIALGANYSCALSDTGSIYTFG 613
Query: 65 GCQAGQLGLG-------------------PQTRSFSFIPNESDTYFRNIPILVVPNGVQL 105
+ GQLGLG + P E T R IP+ V
Sbjct: 614 SGEWGQLGLGGSGCPVRGGSSPPGGGGSNGVGQDGVEAPVEVLTP-RRIPLFEQLPAVH- 671
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
VA G++ + + ++ WG N++GQ+ +S +
Sbjct: 672 VAAGYAFAMAIVGGHHVYFWGNNNHGQSGRGRSHF 706
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG + GQ G H L + E P V L+G I ++CG AL++ G+L
Sbjct: 688 VYFWGNNNHGQSGRGRSHFDLSTKKVEA-PVLVETLEGKNIIQLSCGSFFALALSADGSL 746
Query: 61 YAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRN----IPILVVPNGVQLVACGHS---- 111
Y+WG LG + R + + ES + R P LV G + +A G +
Sbjct: 747 YSWGLVDCVGLGTPEEVERLYHGVLGESLSNERRAVVLTPQLVTVKGRRRIAPGEATVTV 806
Query: 112 -HTLVYMRDGKIHGWGYNSYGQ 132
+V +R G+ H N +G+
Sbjct: 807 PERIVRIRAGQWHSGAINEHGE 828
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 24 GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI 83
G + + P I + G H+ A+ G L+ WG G+LG G ++S +++
Sbjct: 793 GRRRIAPGEATVTVPERIVRIRAGQWHSGAINEHGELFTWGVGYQGRLGHG--SKSPAYV 850
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
P T R + + V VACG HT+ G + WG N+ GQ + +
Sbjct: 851 P----TLVRGA---LEGHRVVDVACGSFHTVALTAAGAVFCWGDNASGQCGTTAGSPDAF 903
Query: 144 PSP-----VDWCVGEV-RKLAAGGGHSAVLTD 169
+P +++ G V R +A G H+ V+ +
Sbjct: 904 TAPYRVVGLEYVAGGVARSIACGRQHTVVVME 935
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL + + + CG HT ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHT-LVYMRDGK 121
G GQLG G + S PI+V V++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS-----------PTPIMVEKERVVEIAACHSTHTSAAKTQGGH 306
Query: 122 IHGWG 126
++ WG
Sbjct: 307 VYMWG 311
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 20/148 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V + L + +ACG + A+ G +Y
Sbjct: 148 EVFAWGYNNCGQVGSGSTAN---QPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRD 119
WG GQLGLG + P+ V V + CG++HTL +
Sbjct: 205 WGYNGNGQLGLGNNGNQLT-------------PVRVAALQSVCVNQIVCGYAHTLALTDE 251
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPV 147
G ++ WG N+YGQ P+P+
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTPI 279
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + L+P+++ AL G IK ++ G G H T G +
Sbjct: 42 EVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVV 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
YAWG QLG G + + P+ V N V VACG H++
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIA-------------PVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG++ WGYN+ GQ + + P V C+ R ++ G ++ +
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSM 194
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+Y WG + GQLG S + L P ++ ++ AC HT A ++G +Y W
Sbjct: 254 LYAWGANTYGQLG---TGSKNNLLSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHVYMW 310
Query: 64 GGCQAGQLGLGPQTRSFS 81
G C+ GQ + P FS
Sbjct: 311 GQCR-GQSVVLPHLTHFS 327
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG+ + Q+ L V L GI V+ G HT AL G +++WG
Sbjct: 420 LWAWGDNNQGQLGNGTQQNSSLPL----PVNLTGI--TSVSSGHRHTAALRLDGTVWSWG 473
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
Q GQLG G +T R+ P+ V GV +A G H+L +G +
Sbjct: 474 TNQYGQLGDGTRTD-------------RSTPVQVPGLTGVTSIATGDYHSLALRSNGTVW 520
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GWG+N YGQ + + P V + + +AAGGGHS L
Sbjct: 521 GWGFNRYGQLGDGTTVDRTQPVQVS-GLTNIVSIAAGGGHSLAL 563
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
++WG GQLG + Q + P +V L + D G +HT L + G L+AWG
Sbjct: 370 WSWGDNVFGQLGDTTFQ---PRMAPVQVTGL-ALGRADATSGQLHTVMLGANGRLWAWGD 425
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G Q S ++P+ V G+ V+ GH HT DG + W
Sbjct: 426 NNQGQLGNGTQQNS-------------SLPLPVNLTGITSVSSGHRHTAALRLDGTVWSW 472
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G N YGQ + T P V G V +A G HS L
Sbjct: 473 GTNQYGQLGDGTRTDRSTPVQVPGLTG-VTSIATGDYHSLAL 513
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + Q +P +V L I + G H+ AL S G ++AWG
Sbjct: 619 VWAWGYNASGQLGVGTTQG---SAVPLQVSGLSAI--TSITAGTYHSLALRSDGWVWAWG 673
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G SD R P LVV + + G H+L DG +
Sbjct: 674 FNFEGQLGNG-----------TSDN--RLTPGLVVSMSNATAIFAGDLHSLAVRADGTLW 720
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
WG NS+GQ + AW+P V
Sbjct: 721 AWGLNSHGQLGTGDTVEAWFPVQV 744
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYA 62
D++ WG + GQLG +L PRRV L G+ +A G H AL + G ++A
Sbjct: 120 DVWAWGDNASGQLGDGTLT---PRAQPRRVSGLTQGV---SLASGFAHAVALRADGTVWA 173
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG ++ QLG TRS IP +P L + + V G S +L DG +
Sbjct: 174 WGDNRSNQLGSATLTRSPVPIP---------VPGL---SDIVAVVAGGSSSLALRADGTV 221
Query: 123 HGWGYNSYGQ 132
WG N YGQ
Sbjct: 222 WAWGDNRYGQ 231
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 18/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + P RV LD + ++ G H AL + G +AWG
Sbjct: 221 VWAWGDNRYGQLGDGTTV---RRAAPVRVANLDAV--THISAGAYHALALRADGTAWAWG 275
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + T R +P+L+ + V G+ H+L DG +
Sbjct: 276 YNAFGQLG-------------DGTTVQRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVWA 322
Query: 125 WGYNSYGQ 132
WG N Y Q
Sbjct: 323 WGDNRYRQ 330
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P +V L I +A GG H+ AL S G ++A+G
Sbjct: 519 VWGWGFNRYGQLGDGTTV---DRTQPVQVSGLTNIV--SIAAGGGHSLALRSDGTVWAFG 573
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TR+++ +P ++ V V +A G ++L DG +
Sbjct: 574 YNFDGQLGNG--TRTWTILPVQA----------VGLGNVVSLAAGKMYSLALRADGTVWA 621
Query: 125 WGYNSYGQ 132
WGYN+ GQ
Sbjct: 622 WGYNASGQ 629
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG +GQLG + Q DK P +V + VA G ++ AL G ++AWG
Sbjct: 71 VFAWGFNRLGQLGDGTTQ--DKAA-PVQVAGVASAV--SVAAGDQYSLALDENGDVWAWG 125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G + P R + L GV L A G +H + DG +
Sbjct: 126 DNASGQLGDG------TLTPRAQP---RRVSGLT--QGVSL-ASGFAHAVALRADGTVWA 173
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFR---L 181
WG N Q + T + P PV + ++ + AGG S L ++ + R L
Sbjct: 174 WGDNRSNQLGSATLTRSPVPIPVP-GLSDIVAVVAGGSSSLALRADGTVWAWGDNRYGQL 232
Query: 182 AESVTLSNASEIE 194
+ T+ A+ +
Sbjct: 233 GDGTTVRRAAPVR 245
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 23/129 (17%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG D + R + L G+ + V G H+ A+ + GA++AWG
Sbjct: 272 WAWGYNAFGQLG-------DGTTVQRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWG 324
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
+ QLG G T S +P+ + GV LVA G H++ DG
Sbjct: 325 DNRYRQLGTGNLTSSA-------------VPLHAGMTGGVTLVA-GFRHSVALGADGTAW 370
Query: 124 GWGYNSYGQ 132
WG N +GQ
Sbjct: 371 SWGDNVFGQ 379
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG QLG +L S +P G+ + G H+ AL + G ++WG
Sbjct: 320 VWAWGDNRYRQLGTGNLTS---SAVPLHAGMTGGVTL---VAGFRHSVALGADGTAWSWG 373
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPILVVPNGVQL----VACGHSHTLVYMR 118
GQLG DT F R P+ V G+ L G HT++
Sbjct: 374 DNVFGQLG---------------DTTFQPRMAPVQVT--GLALGRADATSGQLHTVMLGA 416
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+G++ WG N+ GQ N + P PV+ + + +++G H+A L
Sbjct: 417 NGRLWAWGDNNQGQLGNGTQQNSSLPLPVN--LTGITSVSSGHRHTAAL 463
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPN 101
+A G H+ A+ S+G ++AWG + GQLG + T + P+ V V +
Sbjct: 55 LAVGQYHSLAVHSEGTVFAWGFNRLGQLG-------------DGTTQDKAAPVQVAGVAS 101
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
V VA G ++L +G + WG N+ GQ + T P V V LA+G
Sbjct: 102 AVS-VAAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSGLTQGV-SLASGF 159
Query: 162 GHSAVL 167
H+ L
Sbjct: 160 AHAVAL 165
>gi|294871534|ref|XP_002765966.1| guanine nucleotide exchange factor p532, putative [Perkinsus
marinus ATCC 50983]
gi|239866429|gb|EEQ98683.1| guanine nucleotide exchange factor p532, putative [Perkinsus
marinus ATCC 50983]
Length = 148
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 20/118 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G G LGH GDK + P+ V AL G I DVA GG HT AL KG LY
Sbjct: 40 ELYTWGYGRDGNLGH-----GDKADVGVPKLVEALKGKRIVDVAAGGGHTMALDDKGVLY 94
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-----VQLVACGHSHTL 114
+G + GQLG G ES +R +P++V G V +ACG+ H++
Sbjct: 95 VFGRGRDGQLGRGDNI--------ESIAAYRPVPVVVEYFGANKLKVTAIACGNDHSV 144
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
LD I ACGG + A+T G LY WG + G LG G +++D +P
Sbjct: 17 LDERRIVRAACGGSYIAAVTDAGELYTWGYGRDGNLGHG----------DKADV---GVP 63
Query: 96 ILV-VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKSTYAWYPSPV 147
LV G ++ VA G HT+ G ++ +G GQ N +S A+ P PV
Sbjct: 64 KLVEALKGKRIVDVAAGGGHTMALDDKGVLYVFGRGRDGQLGRGDNIESIAAYRPVPV 121
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG QLG+ + G L P V L G + +VACG HT ALT+ G ++A
Sbjct: 95 EVFSWGHNGYSQLGNGTSTHG---LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +GQ+G G + P + +N VV N +ACG ++ + G+I
Sbjct: 152 WGYNNSGQVGSGSTANQPT--PRRVSSCLQN---KVVVN----IACGQLCSMAVLDSGEI 202
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+GWGYN GQ + P + G V ++A G H+ LTD
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTD 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PRRV + L + ++ACG + + A+ G +Y
Sbjct: 148 EVFAWGYNNSGQVGSGSTAN---QPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG N + I L N +Q VACG++HT+ +G +
Sbjct: 205 WGYNCNGQLGLGN---------NGNQQTPCRIAALQGVNVIQ-VACGYAHTIALTDEGFV 254
Query: 123 HGWGYNSYGQ 132
+ WG NSYGQ
Sbjct: 255 YSWGANSYGQ 264
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY WG GQLG L + + P R+ AL G+ + VACG HT ALT +G +Y+W
Sbjct: 201 EIYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G + +P +T + ++ AC SHT + G++
Sbjct: 258 GANSYGQLGTGNKCN--QAVPTLINTEKERMS--------EVAACHTSHTSAAKTQSGQV 307
Query: 123 HGWGYNSYGQA---------ANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLTDACS 172
WG GQA ++ +A + +P V W + + +T A S
Sbjct: 308 LMWG-QCRGQAVASPHLTHFSSTDDVFACFATPAVTWHLLSIDA-------EDYMTVAQS 359
Query: 173 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARL-CERLREHLLHGDE 221
LK+ EF +S +S+ + D +AL ++ CE R L DE
Sbjct: 360 LKK--EF---DSPEISDLKFLVDGKCIHVHKALLKIRCEHFRSLLNESDE 404
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 66/153 (43%), Gaps = 21/153 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+++ G G LG LQS + PRR+ L G I ++ G G H T+ G +++
Sbjct: 42 EVFALGTNCSGCLGLGDLQS---TIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G T + P LV N V VACG HT+
Sbjct: 99 WGHNGYSQLGNGTSTHGLT-------------PALVSTNLLGKRVIEVACGSHHTIALTT 145
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
DG++ WGYN+ GQ + + P V C+
Sbjct: 146 DGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCL 178
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+T ++A G +G LGLG +S R I +L V L H
Sbjct: 37 VTVNDEVFALGTNCSGCLGLGDL---------QSTIEPRRIDVLCGKKIVSLSYGTGPHV 87
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLT 168
+ DG++ WG+N Y Q N ST+ P+ V + V ++A G H+ LT
Sbjct: 88 AIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALT 144
>gi|328869013|gb|EGG17391.1| hypothetical protein DFA_08386 [Dictyostelium fasciculatum]
Length = 524
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
L S G+ +++ + + P +V+ L I A G H+ A+ G +YAWG ++
Sbjct: 178 ALYSTGRADMLGIKTDENKYSPNQVITLANKKIDLYATGPKHSYAVDDTGNIYAWG--RS 235
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-----VQLVACGHSHTLVYMRDGKIH 123
LGLG F+ + + R P L+ G + +ACG HTL +++G I+
Sbjct: 236 DLLGLG------QFVKVKQISVQRKEPTLIEHTGFLNFKIVQIACGDEHTLCLLQNGAIY 289
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG GQ N P P+D G +++ ++AG +SA +TD
Sbjct: 290 AWGRGEEGQLGNGVKETRQSPIPIDSLAGLKLKSISAGAFNSAAITD 336
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 4 DIYTWG------LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK 57
+IY WG LG ++ S+Q + L+ I +ACG HT L
Sbjct: 228 NIYAWGRSDLLGLGQFVKVKQISVQRKEPTLIEH--TGFLNFKIVQIACGDEHTLCLLQN 285
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
GA+YAWG + GQLG G + S IP +S + ++ ++ G ++
Sbjct: 286 GAIYAWGRGEEGQLGNGVKETRQSPIPIDSLAGLK----------LKSISAGAFNSAAIT 335
Query: 118 RDGKIHGWG 126
DG+ + WG
Sbjct: 336 DDGECYVWG 344
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 37/198 (18%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ +G GQLG + S QS +P++++ L G+ ++ + GG H+ LT G+LYA
Sbjct: 163 VFAFGSNLKGQLGLGYSSEQSVS---IPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYA 219
Query: 63 WGGCQAGQLGLG---------------------------PQTRSFSFIPNESDTYFRNIP 95
WG GQLGL Q+++ F P ++ +IP
Sbjct: 220 WGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIP 279
Query: 96 ILV-VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW-YPSPVDWCV 151
V G ++V ACG +HT+ RDG + +G YGQ + +ST P + +
Sbjct: 280 TFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFM 339
Query: 152 GE-VRKLAAGGGHSAVLT 168
G V ++A G H+ L
Sbjct: 340 GNVVTQIACGRFHTLALV 357
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+ G QLGH QSG + +VVAL+ I VACG H A+T G L+ W
Sbjct: 62 EVYSCGCNEFQQLGHG--QSGGQL---AKVVALEHYRIISVACGAYHNAAITYNGLLFTW 116
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG + SD + V V+ G HTLV ++
Sbjct: 117 GCNSNGQLGREGDDTGVKLVRALSD------------HKVVQVSLGVEHTLVLTDTARVF 164
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD-WCVG--EVRKLAAGGGHSAVLTDACSL 173
+G N GQ S+ P C+ VR++ AGG HS VLT + SL
Sbjct: 165 AFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSL 217
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG S GQLG +G K V AL + V+ G HT LT ++A+G
Sbjct: 113 LFTWGCNSNGQLGREGDDTGVK-----LVRALSDHKVVQVSLGVEHTLVLTDTARVFAFG 167
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
GQLGLG + IP + IL + V+ + G H+ V G ++
Sbjct: 168 SNLKGQLGLGYSSEQSVSIPQQ---------ILCLSGLPVRRIVAGGWHSFVLTVSGSLY 218
Query: 124 GWGYNSYGQ 132
WG N+YGQ
Sbjct: 219 AWGSNNYGQ 227
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAW 63
++T+G G GQLGH G +PR++ G + +ACG HT AL K G L+A+
Sbjct: 309 VFTFGAGRYGQLGHNESTIGIS--VPRKITEFMGNVVTQIACGRFHTLALVPKTGRLFAF 366
Query: 64 GGCQAGQLGLG 74
G QLG+G
Sbjct: 367 GQGTNAQLGMG 377
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKEL-----------LPRRVVALDGIFIKDVACGGVH 50
H + T GSVG QS ++ +P V L G + +ACG H
Sbjct: 240 HQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETH 299
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
T ALT G ++ +G + GQLG T S +P + + N+ V +ACG
Sbjct: 300 TVALTRDGGVFTFGAGRYGQLGHNESTIGIS-VPRKITEFMGNV--------VTQIACGR 350
Query: 111 SHTLVYM-RDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
HTL + + G++ +G + Q + P PV
Sbjct: 351 FHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPV 388
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
L+AWG C+ GQL L IP D RN+P L+ + CG++HT+ D
Sbjct: 9 LFAWGSCEEGQLTLDKNDAYQILIPKALDV--RNLPTLIQ------ITCGYTHTVFLTID 60
Query: 120 GKIHGWGYNSYGQAANEKS 138
G+++ G N + Q + +S
Sbjct: 61 GEVYSCGCNEFQQLGHGQS 79
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+++ WG GQL +L D + L+P+ + + + + CG HT LT G +Y
Sbjct: 8 ELFAWGSCEEGQL---TLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVY 64
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+ G + QLG G + + + ++R I VACG H +G
Sbjct: 65 SCGCNEFQQLGHGQSGGQLAKV--VALEHYRIIS----------VACGAYHNAAITYNGL 112
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--------AAGGGHSAVLTDA 170
+ WG NS GQ E D V VR L + G H+ VLTD
Sbjct: 113 LFTWGCNSNGQLGREGD---------DTGVKLVRALSDHKVVQVSLGVEHTLVLTDT 160
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++TWG G G LGH +ELLPR+V I +A G HT A+T G LY W
Sbjct: 162 DVFTWGYGGFGALGHYVYH---RELLPRKVNCPWEGKIVHIATSGAHTAAITESGELYTW 218
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + S + + L VP V VACG TL DG++
Sbjct: 219 GRDEGDGRLG--LGSGGGPGEAGSLSVPSKVSALPVP--VAAVACGGFFTLALTSDGQLW 274
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG NS + ++ W P V V ++A GG HS LTD
Sbjct: 275 SWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVACGGYHSLALTD 321
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P +V AL + + VACGG T ALTS G L++WG +LG G N SD
Sbjct: 243 VPSKVSALP-VPVAAVACGGFFTLALTSDGQLWSWGANSNFELGRG---------SNSSD 292
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
+ +P L + +Q VACG H+L +G++ W
Sbjct: 293 WRPQIVPSLKNVHVIQ-VACGGYHSLALTDEGEVLSW 328
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S +LG S S + P+ V +L + + VACGG H+ ALT +G + +W
Sbjct: 272 QLWSWGANSNFELGRGSNSS---DWRPQIVPSLKNVHVIQVACGGYHSLALTDEGEVLSW 328
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G G+LGH + S L+P V LD + VACG T AL+ G +YA G
Sbjct: 491 LFTWGDGDDGKLGHGDIAS---RLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMG 547
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q + R+ S I F VQ VACG+ H V +++
Sbjct: 548 TADPSQDDV---VRAPSCIEGGLGKSF-----------VQEVACGYHHIAVLNSKAEVYT 593
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG S GQ + + Y P+ V G +VRK+ G ++A +
Sbjct: 594 WGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATI 637
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y+WG S G+LGH CS P+ + DG ++ CG HTCA+T+ G LYA
Sbjct: 325 LYSWGEESGGRLGHGVCSYVPH-----PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYA 379
Query: 63 WGGC--QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 118
WG AG LGLG ++++ + IL G V+ ++CG HT
Sbjct: 380 WGDGDHNAGLLGLG-----------SGASHWKPVRILGQMEGINVRTISCGPWHTAFVTS 428
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
GK+ +G ++G + P V+ G + A G HSA +
Sbjct: 429 AGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAV 478
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 31/186 (16%)
Query: 4 DIYTWG--LGSVGQLGHCSLQSGDKE------LLPRRVVALDGIFIKDVACGGVHTCALT 55
D++ WG +G G LG +SG LP+ + + + + ++CG + +T
Sbjct: 262 DVFVWGESIGD-GLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVT 320
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSH 112
+G LY+WG G+LG G S++P+ P L+ + V+L CG H
Sbjct: 321 KQGQLYSWGEESGGRLGHG----VCSYVPH---------PKLIDEFDGSTVELADCGEFH 367
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVL 167
T G ++ WG + + A + PV +G+ VR ++ G H+A +
Sbjct: 368 TCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVR-ILGQMEGINVRTISCGPWHTAFV 426
Query: 168 TDACSL 173
T A L
Sbjct: 427 TSAGKL 432
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCAL 54
++YTWG GS GQLGH GD E +P V AL G ++ V CG +T +
Sbjct: 590 EVYTWGKGSNGQLGH-----GDTEYRRMPTLVKALKGKQVRKVVCGSNYTATI 637
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 93/227 (40%), Gaps = 34/227 (14%)
Query: 8 WGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG S GQLG +G+ L+P V G I +A G H+ A+TS G AWGG
Sbjct: 270 WGGNSNGQLG-----TGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGG 324
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLVYMRDGKI 122
GQLG+G T S + P++V +P + G H+L M G
Sbjct: 325 NSRGQLGIGTTTNS-------------DTPVIVNLPPDTTITTNDGGFFHSLGSMSTGAA 371
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKEL----C 177
WG N GQ +T + P V G ++ +AAGGGHS L + L
Sbjct: 372 LAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVAPPTSTTLQVTPP 431
Query: 178 EFRLAESVTLSNA------SEIEDVASRTGSEALARLCERLREHLLH 218
+ + VTL+ A + + R+ S ALA + H
Sbjct: 432 NPTVGQDVTLTAAVTCNVDTPTGTITFRSNSTALATVPLTASSTATH 478
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 83/197 (42%), Gaps = 20/197 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG +VGQLG S + + P V + VA G H+ ALTS GA+ AWG
Sbjct: 59 ILAWGANNVGQLGDGSTIARNA---PVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWG 115
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VP--NGVQLVACGHSHTLVYMRDGK 121
GQLG G + ++PI V +P V +A H H+L G
Sbjct: 116 ENNFGQLGTG-------------NNLNSSVPITVALPPDTTVVAIAASHGHSLALTSAGA 162
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEFR 180
+ WG N+ GQ N + + P V+ G V +AAG HS +T +
Sbjct: 163 VLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITSTGAALAWGGNG 222
Query: 181 LAESVTLSNASEIEDVA 197
+ S A+ +E +A
Sbjct: 223 NGQLGNNSTATSLEPIA 239
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 16/167 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG +VGQLG+ + + + P V G + +A G H+ A+TS GA AWG
Sbjct: 163 VLAWGANNVGQLGNGNTFNSNT---PVTVNLPPGTTVATIAAGTNHSLAITSTGAALAWG 219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIH 123
+ N + T I + + P+ + +A G S++L G
Sbjct: 220 -----------GNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTAL 268
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG NS GQ + + P V G + +AAG HS +T
Sbjct: 269 AWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTS 315
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VP-- 100
VA G T + + + AWG GQLG G T RN P+ V +P
Sbjct: 43 VAQPGSATPSGVASDTILAWGANNVGQLGDG-------------STIARNAPVAVSLPPD 89
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAA 159
V VA G SH+L G + WG N++GQ + + P V V +AA
Sbjct: 90 TTVTAVAGGDSHSLALTSAGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAA 149
Query: 160 GGGHSAVLTDA 170
GHS LT A
Sbjct: 150 SHGHSLALTSA 160
>gi|262194268|ref|YP_003265477.1| alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
gi|262077615|gb|ACY13584.1| Alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
Length = 1147
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLP----------RRVVALDGIFIKDVACGGVHTCA 53
+++ WG S GQLG DKE + + ++LDG ++ V G HTCA
Sbjct: 820 NVHCWGDNSNGQLGR-----DDKENIGATQPAATTTLKVALSLDGDSVEKVVAGAYHTCA 874
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
LT GA+Y WG GQLG G F I + + P+ V VQ + G HT
Sbjct: 875 LTVNGAVYCWGDNSYGQLGCG----HFDDIGDGTIPVSSLTPV-PVGEAVQDITAGGFHT 929
Query: 114 LVYMRDGK-IHGWGYNSYGQ-----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
V +D + WGYN +GQ A N + +P+ +V ++AG H+ V+
Sbjct: 930 CVTAQDSSGVKCWGYNQFGQLGYGHAENISTPQEEVFTPIASSAAKVISISAGFYHTCVV 989
Query: 168 TDACSLK 174
D K
Sbjct: 990 LDTLQAK 996
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAWGGCQAGQLGLGPQTRSFSFI 83
DK+ L V + V G HTCA+ S G + WGG GQLG G +FS
Sbjct: 726 DKDPLELTNVQCPSGDVTKVIAGFSHTCAVMSDGGRVRCWGGSTLGQLGYG---NTFSIG 782
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG---KIHGWGYNSYGQAANEKSTY 140
+E+ + P V N A G H+ V + +G +H WG NS GQ +
Sbjct: 783 DDET---LISSPDTSVSNAEISFAAGALHSCVLISEGTEKNVHCWGDNSNGQLGRDDKEN 839
Query: 141 AWYPSPVDWCV---------GEVRKLAAGGGHSAVLT 168
P V K+ AG H+ LT
Sbjct: 840 IGATQPAATTTLKVALSLDGDSVEKVVAGAYHTCALT 876
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 5 IYTWGLGSVGQLGHC---SLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ WG GQLG+ ++ + +E+ +A + ++ G HTC +
Sbjct: 939 VKCWGYNQFGQLGYGHAENISTPQEEVF--TPIASSAAKVISISAGFYHTCVVLDTLQAK 996
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-------VPNGVQLVACGHSHTL 114
WG GQLG G T +F +ESD ++ L + + V+L A G HT
Sbjct: 997 CWGAGSNGQLGRGADTTNFG---DESDEQLASLAELNLGANIGDLKDSVELRAGGF-HTC 1052
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVL 167
+ I WG ++GQ ++ P VD V+ LA G HS V+
Sbjct: 1053 ARVNQ-SIKCWGRANHGQVGYGATSDVLAPPDNFVDLDDAPVKTLALGLNHSCVV 1106
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++ I WG + GQ+G+ + + D P V LD +K +A G H+C + G +
Sbjct: 1055 VNQSIKCWGRANHGQVGYGA--TSDVLAPPDNFVDLDDAPVKTLALGLNHSCVVLKTGNV 1112
Query: 61 YAWGGCQAGQLGLG 74
WG GQLG G
Sbjct: 1113 TCWGRSNLGQLGYG 1126
>gi|70919024|ref|XP_733311.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504990|emb|CAH83572.1| hypothetical protein PC300577.00.0 [Plasmodium chabaudi chabaudi]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL--DGIFIKDVACGGVHTCALTSKGA 59
D+Y+WG G G L G+K L P+++ A D ++ CG H+ ALT G
Sbjct: 15 DLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCGEQHSLALTKSGK 74
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y G + G+LG G F E YF N I++ + +ACG+S + +
Sbjct: 75 VYGCGKGEFGRLGKGNHGDQLFF---EEIDYFVNNNIII-----KDIACGNSFSAALSNN 126
Query: 120 GKIHGWGYNSYGQAANEKS-----TYAWYPSPVDWCVGE---VRKLAAGGGHSAVLTDAC 171
G+++ WG N YGQ E S ++ YP+ V + E ++ +A G H AC
Sbjct: 127 GEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMI----AC 182
Query: 172 SLKELCEF 179
S + F
Sbjct: 183 SESNIIYF 190
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y G G G+LG + GD+ + I IKD+ACG + AL++ G +Y W
Sbjct: 75 VYGCGKGEFGRLGKGN--HGDQLFFEEIDYFVNNNIIIKDIACGNSFSAALSNNGEVYVW 132
Query: 64 GGCQAGQLGLGPQT---RSFSFIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G GQLG+ S PN+ + NI I +L+ACG +H +
Sbjct: 133 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKI-------KLIACGDNHMIACSES 185
Query: 120 GKIHGWG 126
I+ WG
Sbjct: 186 NIIYFWG 192
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 46 CGGVHTCALTSKGALYAW---GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
CG HT A+ LY+W G G GLG ++ P + + + + +
Sbjct: 2 CGYKHTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFIN--- 58
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAA 159
+ CG H+L + GK++G G +G+ + +D+ V ++ +A
Sbjct: 59 ---ICCGEQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNIIIKDIAC 115
Query: 160 GGGHSAVLTD 169
G SA L++
Sbjct: 116 GNSFSAALSN 125
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + G+LG+ + + +P +V L + K +A G H AL G+++AWG
Sbjct: 800 VWSWGQNTYGELGNGTTT---RSSVPVQVALLTDV--KAIAAGDYHGVALKKDGSVFAWG 854
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LG S T ++ P+ G++ +A G HTL DG +
Sbjct: 855 YNGNGELG-------------NSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 901
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WGYN YGQ N +T P+ + + + +AAG S
Sbjct: 902 WGYNGYGQLGNGNNTSRSVPAAIP-GLASIASIAAGENQS 940
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA 107
G HT + S G ++ WG GQLG G T + + +P + ++ G++++A
Sbjct: 638 GNHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGK----------VINLTGMKMIA 685
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
G +HT+ DG +H WGYN YGQ ++ +T + P V + ++AG HS L
Sbjct: 686 GGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVS-TLTNWTAVSAGENHSLAL 744
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + S +P +V+ L G+ K +A G HT AL S G L+ WG
Sbjct: 650 VWGWGYNGHGQLGTGTSNSTS---VPGKVINLTGM--KMIAGGENHTVALRSDGTLHTWG 704
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG T +S + + T + V+ G +H+L DG +
Sbjct: 705 YNGYGQLGDDSTTTRYSPVQVSTLTNW------------TAVSAGENHSLALKSDGTVWA 752
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+GYN YGQ + ++ P V G V +AAG S L
Sbjct: 753 FGYNGYGQLGDGTTSSQRTPVQVKDLTGVV-AIAAGKDFSLAL 794
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG+ S S + + GI K +A G HT AL S G +++WG
Sbjct: 850 VFAWGYNGNGELGNSSTISQSTPVQS----GVTGI--KGIAAGPYHTLALKSDGTVWSWG 903
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G T R++P +P + +A G + ++ Y DG +
Sbjct: 904 YNGYGQLGNGNNTS-------------RSVPA-AIPGLASIASIAAGENQSIAYGNDGIL 949
Query: 123 HGWGYNSYGQAAN 135
+ WG N+ GQ N
Sbjct: 950 YSWGRNANGQLGN 962
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG QLG+ S G L P + A L +K+V+CG H+ ALT G ++A
Sbjct: 215 QLFAWGHNGYSQLGNGSTNPG---LSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFA 271
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ+G G + Y R + + + CG + ++ + +G++
Sbjct: 272 WGYNNCGQIGSGS---------TANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEV 322
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+GWGYN GQ + P V G ++++ +G GH LTD
Sbjct: 323 YGWGYNGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTD 370
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG + + +L P RV AL G+ I+ + G H ALT KG LYAW
Sbjct: 321 EVYGWGYNGNGQLG---IGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAW 377
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G ++ S + +D V++ AC +HT + G++
Sbjct: 378 GANTYGQLGTGTKSNHLSPVHIMADK----------ERVVEVAACHSTHTSAAKTQSGQV 427
Query: 123 HGWG 126
WG
Sbjct: 428 FMWG 431
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD ++P+++ L G + ++ G G H T G L
Sbjct: 162 EVFVFGLNCSSCLG-----TGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLATDDGQL 216
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
+AWG QLG G S P+L+ N V+ V+CG H++
Sbjct: 217 FAWGHNGYSQLGNGSTNPGLS-------------PVLITANLQNKKVKEVSCGSHHSMAL 263
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
DG++ WGYN+ GQ + + YP V C+
Sbjct: 264 TLDGEVFAWGYNNCGQIGSGSTANQPYPRKVTGCL 298
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V L G + CG + AL G +Y
Sbjct: 268 EVFAWGYNNCGQIGSGSTAN---QPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYG 324
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRD 119
WG GQLG+G + P V +Q + G+ H L
Sbjct: 325 WGYNGNGQLGIGNNGNQLT-------------PCRVAALQGMCIQQIVSGYGHCLALTDK 371
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
G ++ WG N+YGQ T + + SPV + R + HS
Sbjct: 372 GLLYAWGANTYGQLGT--GTKSNHLSPVHIMADKERVVEVAACHS 414
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LGH + ++ P + AL G I DV CGG ++ A+++ GALY W
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE---PTLIQALKGKDIIDVECGGTYSAAISANGALYTW 591
Query: 64 GGCQAGQLGLGPQTRSF--SFIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 119
G G+LG G + I SD + + VACG ++HTL
Sbjct: 592 GRGNYGRLGHGTAEDCLTPTMISALSDEH------------IIKVACGSFYAHTLCITSQ 639
Query: 120 GKIHGWGYNSYGQ 132
GK++ WG YG+
Sbjct: 640 GKVYSWGDGDYGK 652
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG D LPR + L + I V CG + AL+ G +Y WG
Sbjct: 642 VYSWGDGDYGKLGR---GGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWG 698
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ +LG P E + F + ++ V V+ G SH L G+++G
Sbjct: 699 KGEGWKLGH----------PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
WG N Q + + P ++ G+ V + G S TD
Sbjct: 749 WGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P+ + ALD + +A G H ALT +Y+WG G+LG G
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHG------------- 550
Query: 88 DTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
DT + P L+ + V CG +++ +G ++ WG +YG+ + + P
Sbjct: 551 DTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP 610
Query: 145 SPVDWCVGE-VRKLAAGGGHSAVL 167
+ + E + K+A G ++ L
Sbjct: 611 TMISALSDEHIIKVACGSFYAHTL 634
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T+ G LY
Sbjct: 476 EVFSWGDGDYGKLGHGN---SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYT 532
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG SD++ RN+P LV +GV VACG SHT+ +DG+
Sbjct: 533 WGEGDFGRLG-------------HSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGR 579
Query: 122 IH-GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
I +G G+ + + + P ++ G +RK+ AG S LT A
Sbjct: 580 IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSA 630
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + +++ P+++ L G + +ACG H+ +T+ G L+ +
Sbjct: 3965 EVFSWGDGDYGKLGHGN---SERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTF 4021
Query: 64 GGCQAGQLGLGPQTRSFSFIPNE----------------SDTYFRN------IPILVVPN 101
G +G+ LG ++ S IP D +N IP L
Sbjct: 4022 GSGDSGR--LGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPAL---E 4076
Query: 102 GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 158
GV + +A G H L G ++ WG N Q S P V G+ +R+++
Sbjct: 4077 GVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQIS 4136
Query: 159 AGGGHSAVLT 168
AG HS+ T
Sbjct: 4137 AGRCHSSAWT 4146
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G I+ V G + ALTS G ++A
Sbjct: 581 VWSFGGGDNGKLGH-----GDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFA 635
Query: 63 W--GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
W G C LG G + + S P R I L + + ++CG SH L +
Sbjct: 636 WGCGSC----LGCG-SSETTSLRP-------RLIEELSITKIID-ISCGDSHCLALSHEN 682
Query: 121 KIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKEL 176
++ WG N+ GQ ST P V G ++++ AG HS T + ++L
Sbjct: 683 EVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQL 740
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G GQL +G +P +L + V CG T + + G + A
Sbjct: 3861 EVYLWGNGRHGQLA----DAGTSASVPTLAPSLSQT--QQVVCGQNCTFLVQANGTVLAV 3914
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV--QLVACGHS--HTLVYMRD 119
G G+LG G N D Y I I + V QLV S H+L
Sbjct: 3915 GEGSYGRLGQG----------NSDDLYTPTI-ISALQGYVVTQLVTSYGSDGHSLALTET 3963
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +LA G HSAV+T
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVT 4013
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG S QL +L +K L P+ + + G T ++++ GA+ A G
Sbjct: 372 VYVWGSNSSHQLAEGTL---EKILQPKLAQGFSDAQM--IEAGQYCTFSVSADGAVKACG 426
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIP---ILVVPNGVQLVACGH---SHTLVYMR 118
G+LGLG D+ +++P +L P ++ V+ HTL
Sbjct: 427 KGSYGRLGLG-------------DSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTA 473
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S YP + +G+V ++AG HSA +T+
Sbjct: 474 EGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTN 526
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 16/142 (11%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG---GVHTCALTSKGALYAWGG 65
G GS G+LG + D P + AL G + + H+ ALT G +++WG
Sbjct: 3915 GEGSYGRLGQGN---SDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGD 3971
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G +E + I L VQL ACG H+ V DGK+ +
Sbjct: 3972 GDYGKLGHG---------NSERQRRPKQIEGLQGEEVVQL-ACGFKHSAVVTADGKLFTF 4021
Query: 126 GYNSYGQAANEKSTYAWYPSPV 147
G G+ ++ P V
Sbjct: 4022 GSGDSGRLGQRSTSNKMIPERV 4043
>gi|307214730|gb|EFN89650.1| RCC1 and BTB domain-containing protein 1 [Harpegnathos saltator]
Length = 225
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG +LG+ S G L+P V + L+G I D+ACG H+ ALT G +YA
Sbjct: 73 EVFSWGHNGYCELGNGSTNQG---LIPTMVNINLNGKHIVDIACGNHHSLALTDDGEVYA 129
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG GQ+G G T + P LV N V + CG + ++
Sbjct: 130 WGQNNCGQVGSGISTN-------------QGAPRLVNSNLAGKKVICITCGQASSMAVTE 176
Query: 119 DGKIHGWGYNSYGQ 132
G+++GWGYN GQ
Sbjct: 177 TGEVYGWGYNGVGQ 190
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYAW 63
+Y G + G LG + S L P+++ AL IK A G G H ALT KG +++W
Sbjct: 21 VYALGSNTSGCLGTGDMHS---TLYPKKIEALCDKGIKTFAYGSGPHVLALTDKGEVFSW 77
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGK 121
G G LG + + IP NI + NG +V ACG+ H+L DG+
Sbjct: 78 G--HNGYCELGNGSTNQGLIPT-----MVNINL----NGKHIVDIACGNHHSLALTDDGE 126
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
++ WG N+ GQ + ST P V+
Sbjct: 127 VYAWGQNNCGQVGSGISTNQGAPRLVN 153
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S G L+ L G + + CG + A+T G +Y
Sbjct: 126 EVYAWGQNNCGQVGSGISTNQGAPRLVNSN---LAGKKVICITCGQASSMAVTETGEVYG 182
Query: 63 WGGCQAGQLGLG 74
WG GQLG+G
Sbjct: 183 WGYNGVGQLGIG 194
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL + + +ACG HT ALT +G LYAW
Sbjct: 207 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAW 263
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 119
G GQLG G ++ S P+ ++ V++ AC +HT +
Sbjct: 264 GANTYGQLGTGNKSNQLS-------------PVQIMMEKERVVEIAACHSAHTSAAKTQS 310
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 311 GQVYMWG 317
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGA 59
M D+Y WG + GQ+G S + + PRRV L G + +ACG + A+ + G
Sbjct: 151 MDGDLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGE 207
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+Y WG GQLGLG T R + V V +ACG++HTL +
Sbjct: 208 VYGWGYNGNGQLGLGNNGNQL--------TPCRVAALHSV--CVLQIACGYAHTLALTDE 257
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
G ++ WG N+YGQ + SPV + + R + HSA
Sbjct: 258 GLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKERVVEIAACHSA 301
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK---DVACGGVHTCALTSKGAL 60
++Y WG QLG+ + G + P +V + IK +VACG H+ AL+ G L
Sbjct: 101 EVYAWGHNGYSQLGNGTTNQG---ITPVQVCT--NLLIKKVVEVACGSHHSMALSMDGDL 155
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG GQ+G G P R + + V +ACG + ++ + +G
Sbjct: 156 YAWGYNNCGQVGSGSTANQ----PTP-----RRVSNCLQGKIVVGIACGQTSSMAVVNNG 206
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLTD 169
+++GWGYN GQ + P V C V ++A G H+ LTD
Sbjct: 207 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC---VLQIACGYAHTLALTD 256
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + ++P+++ AL G I ++ G G H T G +
Sbjct: 48 EVFVFGLNCSNCLG-----TGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEV 102
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG QLG G N+ T + L++ V+ VACG H++ DG
Sbjct: 103 YAWGHNGYSQLGNG--------TTNQGITPVQVCTNLLIKKVVE-VACGSHHSMALSMDG 153
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
++ WGYN+ GQ + + P V C+
Sbjct: 154 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 92/253 (36%), Gaps = 57/253 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 260 LYAWGANTYGQLG-----TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 62 AWGGCQAGQLGLGPQTRSFS-------------------------FI------------P 84
WG C+ GQ P F+ F+ P
Sbjct: 315 MWGQCR-GQSVTFPHLTHFACTDDVFACFATPAVMWRLLSVEHEDFLTVAESLKKEFDSP 373
Query: 85 NESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
SD FR + + V V + C H T+ W + ++ +Y Y
Sbjct: 374 ETSDLKFRVDGKYIHVHKAVLKIRCEHFRTMFQSY------WNEDMKEVIEIDQFSYPVY 427
Query: 144 PSPVDWCVGEVRKLAA--GGGHSAVLTDACS--LKELCEFRLAESVTLSNASEIEDVASR 199
+ +++ + L G + T C LK+LC+ + +T+ NA + A R
Sbjct: 428 RAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLLSAAVR 487
Query: 200 TGSEALARLCERL 212
+E L C +
Sbjct: 488 YDAEDLEEFCFKF 500
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG+ S G+LG + LLP +V L G+ ++A G HT A+ G+ ++WG
Sbjct: 266 VWTWGINSSGELGDGTTT---HSLLPIQVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + T R P+LV GV+ ++ G HT+ DG
Sbjct: 321 NNAYGQLG-------------DGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAW 367
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
GWGYNS GQ N +T + P V + + ++ AGG H+
Sbjct: 368 GWGYNSAGQLGNGTTTNSSIPVQVA-ALTQAVEIDAGGYHT 407
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG+ + +L P+ V LDG+ ++ G HT AL + G ++AWG
Sbjct: 570 VAAWGYNAYGQLGNGTTA---NQLTPQSVPELDGV--TAISAGSTHTVALKADGTVWAWG 624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S + +P L V +A GH HT+ DG +
Sbjct: 625 SNLYGQLGDGTFTHRSSPV---------QVPSL---ENVVSIAAGHFHTVAVKGDGTLWV 672
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGY GQ +T P V +G +AAGG H+ L
Sbjct: 673 WGYGPQGQLGLGTTTNQSVPVQVS-GLGHAVAIAAGGYHTVAL 714
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P +V +L+ + +A G HT A+ G L+ WG
Sbjct: 620 VWAWGSNLYGQLGDGTFT---HRSSPVQVPSLENVV--SIAAGHFHTVAVKGDGTLWVWG 674
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
GQLGLG T +++P+ V G + +A G HT+ + +G++
Sbjct: 675 YGPQGQLGLGTTTN-------------QSVPVQVSGLGHAVAIAAGGYHTVALLANGQVW 721
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYNS GQ + + P V + V LAAGG +AVL
Sbjct: 722 TWGYNSSGQLGDATIIQRYSPVLVP-GLTNVIALAAGGYTTAVL 764
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG + GQLG+ + Q LP + G+ DVA G HT AL++ G + AW
Sbjct: 520 VWTWGYNAYGQLGNGTTTQVVTPTQLP----GMSGVI--DVAAGVNHTVALSADGTVAAW 573
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T + P +++P L +GV ++ G +HT+ DG +
Sbjct: 574 GYNAYGQLGNG--TTANQLTP-------QSVPEL---DGVTAISAGSTHTVALKADGTVW 621
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N YGQ + T+ P V + V +AAG H+ +
Sbjct: 622 AWGSNLYGQLGDGTFTHRSSPVQVP-SLENVVSIAAGHFHTVAV 664
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++TWG + GQLG + +P +V + + VA G T AL + G ++ W
Sbjct: 215 SVWTWGSNAYGQLGDGT---NTLRAVPVQVPGMSDVVA--VAAAGSRTVALKADGTVWTW 269
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGK 121
G +G+LG G T S +PI VPN GV +A G HTL +DG
Sbjct: 270 GINSSGELGDGTTTHSL-------------LPIQ-VPNLSGVTNIAAGLWHTLAVKKDGS 315
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+YGQ + + P V G VR L+ G H+ L
Sbjct: 316 AWSWGNNAYGQLGDGTTLNRLRPVLVAGLTG-VRALSGGVVHTVAL 360
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + G+LG + + P VV + GI A G H+ AL + GA++ WG
Sbjct: 471 LFAWGHNTNGELGDGTTT---QRTSPTAVV-VSGIV--KTAGGSAHSVALGAGGAVWTWG 524
Query: 65 GCQAGQLGLGPQTRSFSF--IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
GQLG G T+ + +P S GV VA G +HT+ DG +
Sbjct: 525 YNAYGQLGNGTTTQVVTPTQLPGMS--------------GVIDVAAGVNHTVALSADGTV 570
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN+YGQ N + P V G V ++AG H+ L
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTPQSVPELDG-VTAISAGSTHTVAL 614
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG S GQLG+ + + +P +V AL ++ GG HT A G LYAWG
Sbjct: 367 WGWGYNSAGQLGNGTTTNSS---IPVQVAALTQAV--EIDAGGYHTLARRQDGTLYAWGD 421
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD---GKI 122
G LG G T S ++P+ V +GV+ G+ +++ + ++
Sbjct: 422 NFYGALGTGNTTSS-------------SVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468
Query: 123 H---GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
H WG+N+ G+ + +T P+ V V + K A G HS L
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAV--VVSGIVKTAGGSAHSVAL 514
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
F V+ G HT + S G+L+AWG +GQLG G +T+ RN P V
Sbjct: 146 FCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQ-------------RNAPTRVR 192
Query: 100 P-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
N V + G H++ DG + WG N+YGQ + +T P V + +V +A
Sbjct: 193 GLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVP-GMSDVVAVA 251
Query: 159 AGGGHSAVL 167
A G + L
Sbjct: 252 AAGSRTVAL 260
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 4 DIYTWGLGSVGQLGHCSL-QSGDKELLP--RRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++TWG S GQLG ++ Q L+P V+AL A GG T L G +
Sbjct: 719 QVWTWGYNSSGQLGDATIIQRYSPVLVPGLTNVIAL--------AAGGYTTAVLKRDGTV 770
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+A+G GQLG G T R+ P + N V ++ G +H + +D
Sbjct: 771 WAFGYNPNGQLGDGTTTS-------------RSSPTATLMNSVVDLSSGVNHMMGLRKDA 817
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ GYNS GQ + +T P+PV
Sbjct: 818 WVRACGYNSAGQLGDGTTTQ--RPTPVQ 843
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T GL GQLG +L++ + V + I DVA G HT A + KG LYAWG
Sbjct: 125 LLTCGLNDNGQLGLGNLENASEF---EEVKGTESI--ADVAAGFWHTLAASKKGKLYAWG 179
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG + P E R+ PI + VACG H++ +DG+++
Sbjct: 180 SNKHGQLGHHDTAVKLAVEPQEI-LLLRDAPI-------KQVACGSYHSMALTKDGEVYT 231
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG+ ++G+ + + + P V+ VGE + + AG +S+ ++ +
Sbjct: 232 WGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTS 278
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+Y WG GQLGH + + P+ ++ L IK VACG H+ ALT G +Y W
Sbjct: 174 KLYAWGSNKHGQLGHHD-TAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTW 232
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+P + +V + + G ++ GK+
Sbjct: 233 GFGAHGRLGHG--STEDEFMPKRVEA--------LVGENISSIHAGFEYSSAVSTSGKVF 282
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WGY + P +D+ +R+LA G H+A ++ + L
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAPVVLDFPT-SIRQLAFGSFHAAAVSHSGML 331
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G+ G+LGH S + E +P+RV AL G I + G ++ A+++ G ++ W
Sbjct: 228 EVYTWGFGAHGRLGHGSTED---EFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVW 284
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G LG G + + + +L P ++ +A G H G +
Sbjct: 285 GYGHFYVLGQGDKKDQLAPV------------VLDFPTSIRQLAFGSFHAAAVSHSGMLF 332
Query: 124 GWGYNSYG 131
WG+ ++G
Sbjct: 333 TWGHATHG 340
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
+K +LP ++ IK VACGG H+ +T G L G GQLGLG
Sbjct: 97 EKPVLPAKL-------IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNL-------- 141
Query: 85 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
E+ + F + + VA G HTL + GK++ WG N +GQ + +
Sbjct: 142 -ENASEFEEVK---GTESIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAV 197
Query: 145 SPVDWCV---GEVRKLAAGGGHSAVLTD 169
P + + ++++A G HS LT
Sbjct: 198 EPQEILLLRDAPIKQVACGSYHSMALTK 225
>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
Length = 220
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLGH + L+P +V AL I ++ G HT ALTS+G LY W
Sbjct: 19 NLYTYGWSKYGQLGHGDFED---HLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGW 75
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQ+G+G N D + VACG HTL +
Sbjct: 76 GWNKFGQVGVG----------NNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVF 125
Query: 124 GWGYNSYGQAAN 135
WG + GQ N
Sbjct: 126 SWGRGTSGQLGN 137
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VACG HT ++ G LY +G + GQLG G +P++ + + + +
Sbjct: 4 VACGWRHTITVSDSGNLYTYGWSKYGQLGHG--DFEDHLVPHKVEA--------LKDSTI 53
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
++ G HT+ +GK++GWG+N +GQ
Sbjct: 54 SQISGGWRHTMALTSEGKLYGWGWNKFGQ 82
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG GQ+G + + D P +V + I VACG HT AL+ K +++WG
Sbjct: 72 LYGWGWNKFGQVG---VGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWG 128
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+GQLG G + RN P+L+
Sbjct: 129 RGTSGQLGNG-------------EIVDRNTPVLI 149
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLG ++ K P V +L K VACG HT T G +Y WG
Sbjct: 56 LYTFGSNDWGQLGLGHTKTASK---PSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E T +L + V+CG+ HT V DG ++
Sbjct: 113 GGSEGQLGLG-----------EDTTECTEPTLLDFDSKAISVSCGYYHTAVVTEDGNLYT 161
Query: 125 WGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G YG+ N + P V +V+ + GGGH+ + ++
Sbjct: 162 FGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAES 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VACG HT +T G LY +G GQLGLG T++ S + +++
Sbjct: 40 VACGDEHTALVTENGRLYTFGSNDWGQLGLG-HTKTAS-----KPSCVKSLK----HEKA 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGG 162
+LVACG SHTL+ DGK++ WG S GQ E +T P+ +D+ + ++ G
Sbjct: 90 KLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYY 148
Query: 163 HSAVLTDACSLKELCE 178
H+AV+T+ +L E
Sbjct: 149 HTAVVTEDGNLYTFGE 164
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 4 DIYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YT+G G+LG + L S D P++V + +K V CGG HT A+ GA+Y
Sbjct: 158 NLYTFGETEYGKLGLNNSDLDSSDT---PQKVTGIKEK-VKFVVCGGGHTTAIAESGAVY 213
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+G +GQLG G S P+ + FR+ + +CG + T V G
Sbjct: 214 TFGNGASGQLGHGNSLLE-SPTPHRVER-FRDA-------DCKHASCGENFTAVITGKGH 264
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLTDA------CS 172
++ +G +G+ +E T + P V + +V+ +A GG H V+ S
Sbjct: 265 LYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIASPRQQNGEIS 324
Query: 173 LKELCEFRLAESVTLSNASEIEDVASRTGSEA-------LARLCERLREHLLHG 219
+ E L ES++ + + ++S E LA L R R + G
Sbjct: 325 SESSDEDPLMESISGQKSLNLSKISSENKEEGEDSQSPLLASLTPRARRRQMDG 378
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+ G G LG C G L P ++ AL + + +ACG H ALT+ G++Y W
Sbjct: 560 DVYSCGSDYYGCLG-CEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTW 618
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VP---NGVQLVACGHSHTLVYMRD 119
G + G+LGLG N++D N+P LV +P N + + CG +T + +
Sbjct: 619 GNGEHGRLGLG----------NQNDF---NLPQLVTLPEKYNYIVKITCGRDNTFILTSN 665
Query: 120 GKIHGWGYNSYGQAA----------------NEKSTYAWYPSPVDWCVG-EVRKLAAGGG 162
G + +G N + A +K +Y P+PV + +A+G
Sbjct: 666 GHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKS 725
Query: 163 HSAVLTD 169
HSAV+ +
Sbjct: 726 HSAVVDE 732
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 25/186 (13%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
LP V L I +A G H+ + G L +G G+LGLG D
Sbjct: 705 LPTPVRPLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLG-------------D 751
Query: 89 TYFRNIPILV--VPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS---TYA 141
RN P LV + NG V + CG + T+V D +I WG G+ S T
Sbjct: 752 YQSRNFPSLVSGLLNGKEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKC 811
Query: 142 WYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTG 201
P P+ + +V +AA + +L + + +L ++ +LS E + +R
Sbjct: 812 CSPKPIFGSLHKVVSMAARSWSTIILAE-----RVLNSKLIQTKSLSITDEKKAEVNRKS 866
Query: 202 SEALAR 207
S + R
Sbjct: 867 SFSKDR 872
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQ---TRSFSFIPNESDTYFRNIPILVV 99
+V+ G H +T + LY W Q G +G R+ P D +F IPI
Sbjct: 487 EVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVD-FFTGIPI--- 542
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG 131
+ CG T++ G ++ G + YG
Sbjct: 543 ----KQAVCGEDFTIILTESGDVYSCGSDYYG 570
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +T+ G L+ +
Sbjct: 1906 EVFSWGDGDYGKLGH---GNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTF 1962
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G G+LGLG T + +P VV + + VACG +HTL DG
Sbjct: 1963 GNGDYGRLGLGTTTN-------------KKVPTRVVALESHQIGYVACGLNHTLCVSADG 2009
Query: 121 -KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
+ +G +G+ + P+ + G V +K+A G S L+
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ +G G G+LG + + LP ++ AL G IK VACG + AL+ G ++ W
Sbjct: 2011 NVWAFGDGDFGKLGQGNTVG---KHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW 2067
Query: 64 GGCQAGQLGLGPQTRSFSFI-PNESDT---YFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G Q +G P TR S P E + YF ++ V CG HTLV D
Sbjct: 2068 G--QERLIG-QPDTRGGSNCQPQEVASLSGYF-----------IEDVVCGAEHTLVLTSD 2113
Query: 120 GKIHGWGYNSYGQ 132
G + GWG NS GQ
Sbjct: 2114 GDVWGWGSNSEGQ 2126
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG + +G + G P+ V +L G FI+DV CG HT LTS G ++ WG
Sbjct: 2064 VFTWGQERL--IGQPDTRGGSN-CQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWG 2120
Query: 65 GCQAGQLGLG 74
GQLGLG
Sbjct: 2121 SNSEGQLGLG 2130
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ + WG G GQ+ + G +P RV + + + CG T + + G + A
Sbjct: 1802 EAFLWGSGRNGQM----CEGGRGAFVPVRVPSFS--CSQQIVCGQNCTFVVQNNGTVLAC 1855
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G S T +I VV V HTL G++
Sbjct: 1856 GEGSYGRLGQGNSDDLHSL------TAISSIQGFVVTQLATSVG-SDGHTLAVTESGEVF 1908
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG YG+ + S P ++ G EV +L+ G HSAV+T
Sbjct: 1909 SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG---GVHTCALTSKGALYAWGG 65
G GS G+LG + S D L + ++ G + +A HT A+T G +++WG
Sbjct: 1856 GEGSYGRLGQGN--SDDLHSL-TAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGD 1912
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L +QL +CG H+ V DGK+ +
Sbjct: 1913 GDYGKLGHGNSDRQ---------RRPRQIEALQGEEVIQL-SCGFKHSAVVTADGKLFTF 1962
Query: 126 GYNSYGQAANEKSTYAWYPSPV 147
G YG+ +T P+ V
Sbjct: 1963 GNGDYGRLGLGTTTNKKVPTRV 1984
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ I +ACG HT ALT +G +Y+W
Sbjct: 200 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSW 256
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G ++ S P + ++ V++ AC +HT + G +
Sbjct: 257 GANTYGQLGTGNKSNQLS--PGQ--------ILMEKERVVEIAACHSAHTSAAKTQSGLV 306
Query: 123 HGWG 126
+ WG
Sbjct: 307 YMWG 310
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PR+V L + +ACG + A+ G +Y
Sbjct: 147 DVYAWGYNNCGQVGSGSTAN---QPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYG 203
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLGLG + P V GV + +ACG++HTL +
Sbjct: 204 WGYNGNGQLGLGNNGNQLT-------------PCRVAALQGVCIMQIACGYAHTLALTDE 250
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N+YGQ
Sbjct: 251 GLMYSWGANTYGQ 263
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + ++P+++ +L G I+ ++ G G H T G +
Sbjct: 41 EVFVFGLNCSNCLG-----TGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEV 95
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
YAWG QLG G + + PI V N V VACG H+L
Sbjct: 96 YAWGHNGYSQLGNGTTNQGVT-------------PIQVCTNLLIKKVIEVACGSHHSLAL 142
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTD 169
DG ++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 143 SSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVD 197
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 57/253 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y+WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 253 MYSWGANTYGQLG-----TGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVY 307
Query: 62 AWGGCQAGQLGLGPQTRSFS-------------------------FI------------P 84
WG C+ GQ + P FS F+ P
Sbjct: 308 MWGQCR-GQSVVLPHVTHFSCTDDVFACFSTPAVMWRLLSVEHEDFLTVTESLKREFDSP 366
Query: 85 NESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
SD FR + + V V + C H T+ W + ++ +Y Y
Sbjct: 367 ETSDLKFRVDGKFIYVHKAVLKIRCEHFRTMFQSY------WNEDMKEVIEIDQFSYPVY 420
Query: 144 PSPVDWCVGEVRKLAA--GGGHSAVLTDACS--LKELCEFRLAESVTLSNASEIEDVASR 199
+ +++ + L G + T C LK+LC+ + +T+ NA + A R
Sbjct: 421 RAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHLIKRGITVENAFSLLSAAVR 480
Query: 200 TGSEALARLCERL 212
+E L C +
Sbjct: 481 YDAEDLEEFCFKF 493
>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T+G G GQ+G S + EL P V A+ G+ + +A G HT +T G +YA+G
Sbjct: 289 LLTFGWGLYGQVGQ---GSNEDELSPCLVSAMGGLQVTGIAAGLWHTLCITDIGDVYAFG 345
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G Q GQLG+G + S + P+L + V VACG H++V GKI
Sbjct: 346 GNQFGQLGVGGNSAEMS-------PRLIDAPLLEDESCVA-VACGARHSVVLTGSGKIFA 397
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 398 WGWNKYGQ 405
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 27/122 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD-----VACGGVHTCALTSKG 58
D+Y +G GQLG + E+ PR + D ++D VACG H+ LT G
Sbjct: 340 DVYAFGGNQFGQLG---VGGNSAEMSPRLI---DAPLLEDESCVAVACGARHSVVLTGSG 393
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLV 115
++AWG + GQLGLG D R++P+ V N +ACG HTL
Sbjct: 394 KIFAWGWNKYGQLGLG-------------DNNNRDLPVQVTMNDGGRAANIACGWWHTLA 440
Query: 116 YM 117
+
Sbjct: 441 TV 442
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 30 PRRVVALD-GIFIKDVACGGVHTCALTSK------GALYAWGGCQAGQLGLGPQTRSFS- 81
P +V LD GI I VA GG HT AL+ + G ++ WG GQLGLG + R S
Sbjct: 185 PPCLVNLDPGIRISIVAAGGRHTLALSGEFSFKYVGHVWGWGYGGEGQLGLGTRMRIVSS 244
Query: 82 --FIP--NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
IP N + + + + ++ +ACG H+ + G + +G+ YGQ
Sbjct: 245 PQLIPCFNSPENGISSSGAPIPGSSIKAIACGGRHSAIVTDAGALLTFGWGLYGQVGQGS 304
Query: 138 STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ P V G +V +AAG H+ +TD
Sbjct: 305 NEDELSPCLVSAMGGLQVTGIAAGLWHTLCITD 337
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 31/182 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQS--GDKELLP----------RRVVALDGIFIKDVACGGVHTC 52
++ WG G GQLG + +L+P + G IK +ACGG H+
Sbjct: 222 VWGWGYGGEGQLGLGTRMRIVSSPQLIPCFNSPENGISSSGAPIPGSSIKAIACGGRHSA 281
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACG 109
+T GAL +G GQ+G G S P LV G V +A G
Sbjct: 282 IVTDAGALLTFGWGLYGQVGQGSNEDELS-------------PCLVSAMGGLQVTGIAAG 328
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAV 166
HTL G ++ +G N +GQ ++ P +D + E +A G HS V
Sbjct: 329 LWHTLCITDIGDVYAFGGNQFGQLGVGGNSAEMSPRLIDAPLLEDESCVAVACGARHSVV 388
Query: 167 LT 168
LT
Sbjct: 389 LT 390
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 768 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 824
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 825 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 872
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 873 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 923
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 712 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 766
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 767 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 813
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 814 TLAVTENGQVWSWGDGDYGK 833
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 823 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 879
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 880 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 927
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 928 HSWGSNDQCQ 937
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 679 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 732
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 733 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 792
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 793 LVAGLKGLKVIDVACGSGDAQTL 815
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 614 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVW 670
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 671 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 718
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 719 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 769
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 558 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 612
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 613 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 659
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 660 TLAVTDNGQVWSWGDGDYGK 679
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 669 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 725
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 726 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 773
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 774 HSWGSNDQCQ 783
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 525 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 578
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 579 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 638
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 639 LVAGLKGLKVIDVACGSGDAQTL 661
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PR+V + + G VACG + A+ G ++
Sbjct: 223 DVYAWGQNNCGQVGSGSTTN---QPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFG 279
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + S N+ +V+ V CG++HT+ +G +
Sbjct: 280 WGYNGNGQLGLGNN------VNQTSPCRVTNLQGVVI----HKVVCGYAHTMALSDEGVL 329
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGH--SAVLTDACSLKELCE 178
+ WG NSYGQ N+ + + + P D +G + ++AA + SAV+T + +
Sbjct: 330 YTWGANSYGQLGTGNKANQVSPFKMPTD--IGRIVEIAASHYNHISAVMTQTSRVYMWGQ 387
Query: 179 FRLAESVTLSNASEIEDV 196
R +SVT+ + +
Sbjct: 388 CR-GQSVTVPTETPFHSI 404
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 4 DIYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ +WG QLG+ C+ Q L+P + A + VACG H+ ALT+ G +YA
Sbjct: 171 ELLSWGHNGYCQLGNNCNTQG----LVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYA 226
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQ+G G T P R + + VACG + ++ M +G++
Sbjct: 227 WGQNNCGQVGSGSTTNQ----PTP-----RKVSSGIGGRRCIGVACGQTSSMAVMENGEV 277
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTD 169
GWGYN GQ + P V G V K+ G H+ L+D
Sbjct: 278 FGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSD 325
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 18/141 (12%)
Query: 36 LDGIFIKDV--AC----GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
LD F+ + AC G +T ++A G +G LGLG S P + D
Sbjct: 89 LDRTFVSKLRLACVFGSSGNEALMVTQDDDVFALGSNSSGCLGLGDTHGSLE--PRKVDA 146
Query: 90 YFRNIPILVVPNGVQLVACGH-SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
R G+ +A G H L G++ WG+N Y Q N +T PS +
Sbjct: 147 LCRK--------GIHALAYGSGPHVLAVTESGELLSWGHNGYCQLGNNCNTQGLVPSSIS 198
Query: 149 WCVG-EVRKLAAGGGHSAVLT 168
+ V ++A G HS LT
Sbjct: 199 AGLSHRVAQVACGSHHSLALT 219
>gi|157867448|ref|XP_001682278.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125731|emb|CAJ03462.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1142
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H +++TWG+G G+LGH S L R AL+G + DVACG HT ALT+ GA++
Sbjct: 737 HGELFTWGVGYQGRLGHGSKAPAYVPTLVRG--ALEGHRVVDVACGSFHTVALTAAGAVF 794
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 117
WG +GQ G + + P+ +R + + V GV + +ACG HT+V M
Sbjct: 795 CWGDNASGQCG------TTAGSPDAFTAPYRVVGLEYVAGGVARSIACGRQHTVVVM 845
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + D+ V G+ + ++A G ++CAL+ G++Y +G
Sbjct: 465 LFSWGSGGNGELGTHATR--DEPTPTMAQVTPFGVRVCEIALGANYSCALSDTGSIYTFG 522
Query: 65 GCQAGQLGLGPQ---TRSFSFIPNESDTYFR-------NIPI-LVVPNGVQL-------- 105
+ GQLGLG R S ++P+ L++P + L
Sbjct: 523 NGEWGQLGLGGSGCVVRGGSNSTGGGGGGGNGTGQDGVDVPVELLIPRRIPLFEQLPAVH 582
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
VA G++ + + ++ WG N++GQ+ ++ +
Sbjct: 583 VAAGYAFAMAIVEGHHVYFWGNNNHGQSGRGRAHF 617
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 28/193 (14%)
Query: 5 IYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+Y WG + GQ G H L + K P V L+G I ++CG AL+ G L
Sbjct: 599 VYFWGNNNHGQSGRGRAHFDLPT-KKVDAPVLVDTLEGKRIIQLSCGSFFALALSDDGFL 657
Query: 61 YAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPIL------------VVPNGVQLVA 107
Y+WG LG + R + + ES + R +L V P G + A
Sbjct: 658 YSWGLVDCVGLGTPEEVERRYRDVLGESLSNERRAVVLTPQLVTVKGRRRVTPGGAAVTA 717
Query: 108 --------CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKL 157
G H+ G++ WG G+ + A+ P+ V + V +
Sbjct: 718 PERIVRIRAGQWHSGAINEHGELFTWGVGYQGRLGHGSKAPAYVPTLVRGALEGHRVVDV 777
Query: 158 AAGGGHSAVLTDA 170
A G H+ LT A
Sbjct: 778 ACGSFHTVALTAA 790
>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
Length = 1261
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG--IFIKDVACGGVHTCALTSKGALYA 62
+ +WG+ GQLG + +P V D +F++ +ACG H+ ALT+ G +Y+
Sbjct: 97 VMSWGVNDCGQLGQTT-----NSRVPTMVKVPDKKPLFVQ-IACGNEHSLALTNDGTIYS 150
Query: 63 WGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + GQLG+ P+ S P T IPI +ACG +H + +
Sbjct: 151 WGSNRYGQLGMSEPENMSNCHFPMHL-TSIHGIPIAT-------IACGGNHCFLISKSSA 202
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
++GWG N+ GQ + YP+ + VR +A G S LT
Sbjct: 203 VYGWGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRYVACGDEFSVFLT 250
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQ------SGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTS 56
D YT L + G++ C L P R+VA L I + +ACG H+ LT
Sbjct: 34 DRYTLFLTAKGKVYECETHGQVHNTRKRSRLSPFRLVAGLQDIEVSAIACGSSHSLVLTK 93
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL---VACGHSH 112
G + +WG GQLG +R +P +V VP+ L +ACG+ H
Sbjct: 94 SGVVMSWGVNDCGQLGQTTNSR---------------VPTMVKVPDKKPLFVQIACGNEH 138
Query: 113 TLVYMRDGKIHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+L DG I+ WG N YGQ + E + +P + G + +A GG H +++
Sbjct: 139 SLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLIS 198
Query: 169 DACSL 173
+ ++
Sbjct: 199 KSSAV 203
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY+WG GQLG ++ P + ++ GI I +ACGG H ++ A+Y WG
Sbjct: 148 IYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISKSSAVYGWG 207
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL + SD + + P GV+ VACG ++ G +
Sbjct: 208 RNNRGQLGLN----------DLSDRPYPTELTTLRPCGVRYVACGDEFSVFLTHKGALFT 257
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
G ++GQ + + A P V
Sbjct: 258 CGDGTHGQLGHGNLSNALAPFKV 280
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQA-GQLGLGPQTRSFSFI-PNESDTYFRNIPILV 98
++D+A G +T LT+KG +Y C+ GQ+ TR S + P ++I
Sbjct: 27 LRDIAFGDRYTLFLTAKGKVYE---CETHGQVH---NTRKRSRLSPFRLVAGLQDI---- 76
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL- 157
V +ACG SH+LV + G + WG N GQ ++T + P+ V V + + L
Sbjct: 77 ---EVSAIACGSSHSLVLTKSGVVMSWGVNDCGQLG--QTTNSRVPTMVK--VPDKKPLF 129
Query: 158 ---AAGGGHSAVLTD 169
A G HS LT+
Sbjct: 130 VQIACGNEHSLALTN 144
>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
Length = 387
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G GQLGH + +K P ++ +L I ++V CG H+ AL + G++Y +
Sbjct: 240 NLYSWGRGLQGQLGHGNSNDCNK---PTQISSLQAI--REVTCGEAHSMALQNNGSVYVF 294
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG D ++ P ++ +G +++ACG H+ V ++G +
Sbjct: 295 GSGQFGQLGLG-------------DYKQQDTPQMLQIHG-EMIACGRHHSGVLTKNGALF 340
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G N Q E Y +P+
Sbjct: 341 MFGNNEQSQLGLECGKSGAYSTPL 364
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I++WG G+LG + K LP + +L I +A G H A+ ++G LY+WG
Sbjct: 188 IFSWGSNEFGRLGQNAFAKCMK--LPSPITSLGNAKIAKLALGTFHVLAIDTQGNLYSWG 245
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G N +D N P + ++ V CG +H++ +G ++
Sbjct: 246 RGLQGQLGHG----------NSNDC---NKPTQISSLQAIREVTCGEAHSMALQNNGSVY 292
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLTDACSL 173
+G +GQ Y +P + GE+ +A G HS VLT +L
Sbjct: 293 VFGSGQFGQLG--LGDYKQQDTPQMLQIHGEM--IACGRHHSGVLTKNGAL 339
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 41 IKDVACGGVHTCALTS---KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
++ +A G H+ AL + ++ WG QLG + F IP++ D+ N+P +
Sbjct: 113 LQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDA-SEQFVAIPHQLDS--DNLPRI 169
Query: 98 VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPV-DWCVGEVR 155
V + H++T+ +G+I WG N +G+ N + PSP+ ++
Sbjct: 170 VD------IYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNAKIA 223
Query: 156 KLAAGGGH 163
KLA G H
Sbjct: 224 KLALGTFH 231
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG G LG Q+ D++ P+RV D I V+CGG HT + G YA+G
Sbjct: 248 VYIWGKEDYGMLG--VGQTSDQQT-PKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFG 304
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDGK 121
+ G+LGLG DT R P LV Q V ACG SHTL DG
Sbjct: 305 RGEYGRLGLG-------------DTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGI 351
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+ G +G+ P+ +D VR+++AGG HS LT
Sbjct: 352 AYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKDVACGGVHTCALTSKGALY 61
+Y WG GQLG E P + L+G+ + V+CGG HT ALT+ G +Y
Sbjct: 128 LYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVY 187
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI--PILVVP-NGVQL--VACGHSHTLVY 116
WG +GQLG+G +++ + D + P LV NG ++ VACG H+
Sbjct: 188 VWGRGDSGQLGIGS-----AWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAV 242
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G ++ WG YG +++ P V++ +++ GG H+ V+ +
Sbjct: 243 TEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKS 297
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
P+++ L G I V+CG HT ALT+ GA+Y+WG GQLG G +S + +P +
Sbjct: 43 FPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHG-DLKSIN-VPQKI- 99
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS-PV 147
+F + V V+CG H+ DG ++ WG +GQ K A + S PV
Sbjct: 100 AFFEQEGLK-----VDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPV 154
Query: 148 DWCVGE------VRKLAAGGGHSAVLTD 169
+ E V K++ GG H+A LT+
Sbjct: 155 KCPLLEGVADESVVKVSCGGTHTAALTN 182
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P +V L G+ +A G H+ AL S G ++AWG
Sbjct: 188 VWAWGYNGYGQLGDGTTM---NRYTPVQVQNLTGVVA--IAAGSSHSLALKSDGTVWAWG 242
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R P+ V V +A G+ H+L DG +
Sbjct: 243 NNGYGQLGDGTTTN-------------RTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVW 289
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG+N GQ + +T + P V G V +AAGGGHS L
Sbjct: 290 TWGWNYSGQLGDGTTTNRYTPVQVQNLTG-VVAIAAGGGHSLAL 332
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P +V L G+ +A GG H+ AL S G ++AWG
Sbjct: 88 VWAWGDNYYGQLGDGTTT---NRYTPVQVQNLTGVVA--IAAGGGHSLALKSDGTVWAWG 142
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R P+ V GV VA G H+L DG +
Sbjct: 143 YNGYGQLGDGTITN-------------RTTPVQVKNLTGVVAVAAGGGHSLALKSDGTVW 189
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN YGQ + + + P V G V +AAG HS L
Sbjct: 190 AWGYNGYGQLGDGTTMNRYTPVQVQNLTG-VVAIAAGSSHSLAL 232
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P RV L + +A G H+ AL S G ++ WG
Sbjct: 238 VWAWGNNGYGQLGDGTTT---NRTTPVRVQGLTDVVA--IAAGNEHSLALKSDGTVWTWG 292
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T ++ + +N+ GV +A G H+L DG +
Sbjct: 293 WNYSGQLGDGTTTNRYTPV------QVQNL------TGVVAIAAGGGHSLALKSDGTVWA 340
Query: 125 WGYNSYGQ 132
WG N +G+
Sbjct: 341 WGNNDWGE 348
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P V L G+ V G ++ AL S G ++AWG GQLG G T ++ +
Sbjct: 60 PVPVQNLTGVVA--VEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPV------ 111
Query: 90 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+N+ GV +A G H+L DG + WGYN YGQ
Sbjct: 112 QVQNL------TGVVAIAAGGGHSLALKSDGTVWAWGYNGYGQ 148
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A GG + A+ S G ++AWGG +P ++ T GV
Sbjct: 37 IAAGGARSLAIKSDGTVWAWGGTP---------------VPVQNLT------------GV 69
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
V G ++L DG + WG N YGQ + +T + P V G V +AAGGGH
Sbjct: 70 VAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTG-VVAIAAGGGH 128
Query: 164 SAVL 167
S L
Sbjct: 129 SLAL 132
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + P +V L G+ +A GG H+ AL S G ++AWG
Sbjct: 288 VWTWGWNYSGQLGDGTTT---NRYTPVQVQNLTGVVA--IAAGGGHSLALKSDGTVWAWG 342
Query: 65 GCQAGQLGLGPQT 77
G+LG G +T
Sbjct: 343 NNDWGELGDGTRT 355
>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG+ + G LP +V+ L + K +A G H+ ALT+ G + AWG
Sbjct: 265 VWTWGSNDEGQLGNGN--KGGLRTLPIQVLNLKDV--KQLAAGIRHSLALTNDGNVMAWG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQLG + P E+ + I I + GHSH+L + +G +
Sbjct: 321 SDSAGQLGDDLSLKE-QLSPVETSSLTNVIAI----------SAGHSHSLALLSNGALFA 369
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG NSYGQ T P PV
Sbjct: 370 WGSNSYGQLGGSTPTMP-IPLPV 391
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG ++GQLG+ + D+ P +V L IK +A GG H+ AL ++ ++ WG
Sbjct: 215 VWAWGDNTLGQLGNGTQ---DESTTPVKVQGLP--TIKLIAAGGAHSLALDTENRVWTWG 269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG N + R +PI V+ V+ +A G H+L DG +
Sbjct: 270 SNDEGQLG------------NGNKGGLRTLPIQVLNLKDVKQLAAGIRHSLALTNDGNVM 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGGHSAVL 167
WG +S GQ ++ S SPV+ + V ++AG HS L
Sbjct: 318 AWGSDSAGQLGDDLSLKEQL-SPVETSSLTNVIAISAGHSHSLAL 361
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQ 70
GSV G QS D +L V L GI +A G H+ AL G ++AWG GQ
Sbjct: 171 GSVWFWGELLDQSSDTPVL---VEGLSGI--TTIAAGNSHSLALDKSGVVWAWGDNTLGQ 225
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSY 130
LG G Q S + + + +P ++L+A G +H+L + ++ WG N
Sbjct: 226 LGNGTQDESTTPV------KVQGLPT------IKLIAAGGAHSLALDTENRVWTWGSNDE 273
Query: 131 GQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
GQ N K P V + +V++LAAG HS LT+
Sbjct: 274 GQLGNGNKGGLRTLPIQV-LNLKDVKQLAAGIRHSLALTN 312
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ V+ G HT AL + G+++AWG A QLG + R+ P V
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLG-------------DETVVNRSAPTRVAG 107
Query: 101 -NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+GVQ VA G+ +L DG + WG + +++ + T A P + ++ ++A
Sbjct: 108 LSGVQSVASGYFQSLALGGDGSVWAWGLTN---SSDIQMTPAKLPE-----LSDIIAISA 159
Query: 160 GGGHSAVLTDACSL 173
G HS L + S+
Sbjct: 160 GTFHSLALQQSGSV 173
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 4 DIYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++ WG S GQLG SL+ ++L P +L + ++ G H+ AL S GAL+A
Sbjct: 315 NVMAWGSDSAGQLGDDLSLK---EQLSPVETSSLTNVIA--ISAGHSHSLALLSNGALFA 369
Query: 63 WGGCQAGQLG 72
WG GQLG
Sbjct: 370 WGSNSYGQLG 379
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG G GQLG ++++G + +PR V L F+ VACG H ALT G +++
Sbjct: 106 VYTWGGGERGQLGLGREAMETGSR--VPRPVKGLGNAFVISVACGTRHCLALTRDGRVFS 163
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLG G F+ S ++ GV VA G +++L ++
Sbjct: 164 WGEGADGQLGDG------QFVSRHSPEVIADL----RGKGVVSVAAGSTYSLAVTGADQV 213
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ +G NS GQ +T + P+ V + G +V + AG H+ T
Sbjct: 214 YAFGSNSKGQLGVGDTTARFRPTLVRFLDGKQVCHVTAGDFHTLART 260
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G QLG +SGD+ R V L+ I A G + + S G +Y WG
Sbjct: 56 VYTTGKNDRRQLG----RSGDEHKWAR-VTPLETITAVAGAVGLDFSVVVDSTGKVYTWG 110
Query: 65 GCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKI 122
G + GQLGLG + + S +P P+ + N + VACG H L RDG++
Sbjct: 111 GGERGQLGLGREAMETGSRVPR---------PVKGLGNAFVISVACGTRHCLALTRDGRV 161
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG + GQ + + P + G+ V +AAG +S +T A
Sbjct: 162 FSWGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGA 210
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 74/178 (41%), Gaps = 26/178 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G S GQLG + P V LDG + V G HT A T G LYAWG
Sbjct: 213 VYAFGSNSKGQLG---VGDTTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWG 269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG + S + P E I ++ V V+ G HT+ +R G
Sbjct: 270 SNQWGQLGLGSEADSVA-APTE-------ITHILEIGRVLEVSAGRRHTVALIRTVTETG 321
Query: 125 --------WGYNSYGQA------ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
+G N+ GQ K T ++P + KL AGG H+ ++
Sbjct: 322 AQATVAVAFGANNTGQLGLDPDHPASKRTQLFHPVRLKRISSMHPIKLIAGGNHTIMI 379
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+++WG G G+LGH S D +P R+VAL + V CG ++ A+T+ G LY W
Sbjct: 650 DVFSWGNGEGGRLGHGDTSSKD---IPTRIVALAERQVTGVFCGSSYSAAITAAGELYTW 706
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGK 121
G G+LG G N D + I ++ V VA CG +H+L G
Sbjct: 707 GRGTYGRLGHG----------NSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756
Query: 122 IHGWGYNSYGQAAN 135
++ WG +G+ N
Sbjct: 757 VYAWGDGDFGKLGN 770
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + S D+ P+ + AL GI + D+ACG H+ +TS+G + W
Sbjct: 4484 EVFSWGEGEDGKLGHGNRDSYDR---PKLIEALSGIGVIDIACGSAHSACITSQGHVLTW 4540
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4541 GKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4590
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+ WG YG+ S P ++ G V K+ G S LT + S+
Sbjct: 4591 VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4643
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL + VACG T LT +G
Sbjct: 3400 ELYTWGLGEYGRLGH-----GDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGL 3454
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G IP++ + + GV + CG +L +
Sbjct: 3455 VFSWGDGDFGKLGRG--GSEGCSIPHQVER--------LNGVGVMQIECGAQFSLALTKS 3504
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P+P+ G +V +A G H +TD+
Sbjct: 3505 GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDS 3556
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + +K P+ + L I+D+ACG H+ A+TS G LY WG
Sbjct: 3349 VFSWGEGEDGKLGHGNRLTLEK---PKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3405
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G D + P LV + V VACG + TL +
Sbjct: 3406 LGEYGRLGHG-------------DNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEE 3452
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
G + WG +G+ S P V+ G V ++ G S LT +
Sbjct: 3453 GLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKS 3504
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+++WG G G+LG CS+ P +V L+G+ + + CG + ALT G
Sbjct: 3455 VFSWGDGDFGKLGRGGSEGCSI--------PHQVERLNGVGVMQIECGAQFSLALTKSGE 3506
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYM 117
++ WG +LG G +D + R + G ++ VA G H L
Sbjct: 3507 VWTWGKGDYYRLGHG------------TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3554
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 164
G+++ WG N +GQ + + PS V G V ++A G HS
Sbjct: 3555 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHS 3602
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALY 61
++YTWG G+ G+LGH + S DK L P V L + VA CG H+ +T G +Y
Sbjct: 702 ELYTWGRGTYGRLGHGN--SEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
AWG G+LG G T + S +P I + +G V G ++ RDG
Sbjct: 759 AWGDGDFGKLGNG--TCNGSSVPVA-------IELPQCSDGAVKVFSGSHFSVALGRDGT 809
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
++ WG G+ + S + P + G+ + LA G H LT + L
Sbjct: 810 VYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGEL 862
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CGGVHTCALTSKGALYAWGGCQA 68
G V L H + + D P+ + L+ + I +A C G H ALT+ G +++WG +
Sbjct: 601 GQVLSLQHSNCHTPDTTA-PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEG 659
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G DT ++IP +V V V CG S++ G+++ W
Sbjct: 660 GRLGHG-------------DTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTW 706
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVR----KLAAGGGHSAVLTD 169
G +YG+ + S P+ V + + R L G HS +TD
Sbjct: 707 GRGTYGRLGHGNSEDKHLPTIVQ-VLKQQRVIHVALGCGDAHSLCVTD 753
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D P V +L + IK VA GG H AL+S G +++WG + G+LG G
Sbjct: 4448 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHG-------- 4499
Query: 83 IPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
D+Y R I + GV +ACG +H+ G + WG YG+ + S
Sbjct: 4500 ---NRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4556
Query: 142 WYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4557 LQPKLVEALLGYRAIDIACGSGDAQTL 4583
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L + P++V L +K VA GG H ALT G +++
Sbjct: 3295 LYACGEGTNGRLG---LGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFS 3351
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG + G+LG G R P +T + ++ +ACG SH+ G++
Sbjct: 3352 WGEGEDGKLGHG--NRLTLEKPKLIET--------LRTKRIRDIACGSSHSAAITSSGEL 3401
Query: 123 HGWGYNSYGQ 132
+ WG YG+
Sbjct: 3402 YTWGLGEYGR 3411
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G +LGH + Q K P + L G + VA G +H A+T G +YAW
Sbjct: 3506 EVWTWGKGDYYRLGHGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAW 3562
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNG--VQLVACGHSHTLVY 116
G GQ G G +T P LV+ +G V VACG SH++ +
Sbjct: 3563 GDNDHGQQGSG-------------NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3605
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D +P ++ +L G+ + V CG + ALT G++Y W
Sbjct: 4590 NVWSWGDGDYGKLGRGG---SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTW 4646
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G + + R + G ++ +A G H + G+
Sbjct: 4647 GKGDYHRLGHG------------NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGE 4694
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSLKELCEFR 180
+ WG N GQ + + P V G+ + K+ G H+ L+ ++
Sbjct: 4695 VFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS---------TYQ 4745
Query: 181 LAESVTLSNASEIE 194
L+E+V + +E
Sbjct: 4746 LSEAVRPPPSPPLE 4759
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 16/172 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K LP L + +A G ++ G LYA G
Sbjct: 3243 VLVWGLNDKEQLGGLK---GSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG 3299
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGKI 122
G+LGLG N + + +PIL V V V G H + DGK+
Sbjct: 3300 EGTNGRLGLG---------HNNNVPTPKQVPILSQYVVKKVA-VHSGGKHAMALTLDGKV 3349
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
WG G+ + P ++ +R +A G HSA +T + L
Sbjct: 3350 FSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGEL 3401
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P+ + AL+G I D+A G H ALT+ G LY WG QL TR +
Sbjct: 832 PKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCVTRDPIVL------ 885
Query: 90 YFRNIPILVVPNGVQL--VACGHSHTLVY 116
+PIL P +++ +A G + ++V+
Sbjct: 886 ----LPILTTPPTLRIAGMAAGGAQSIVW 910
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+HL+ ++ WG GQLG ++ S +P +V L G+ VA G H+ AL + G
Sbjct: 625 VHLNGTVWVWGNNDFGQLGDGTVTS---RAMPVQVSGLTGV--TAVAVGVYHSLALRNDG 679
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L+AWG GQLG G T P + +P L GV +A G+ H+L
Sbjct: 680 TLWAWGYNNVGQLGNG--TSGIQSTPAQ-------VPGLT---GVIALAAGNGHSLALRT 727
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
DG + GWG NS+GQ + +T P+ V
Sbjct: 728 DGTVWGWGANSFGQLGDGTTTPRSTPTQV 756
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG ++ S P +V L + + V G H+ A+ G ++ WG
Sbjct: 581 VWVWGSNDFGQLGDGTVTS---RKTPVQVSGLSAM--RAVEAGPAHSVAVHLNGTVWVWG 635
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R +P+ V GV VA G H+L DG +
Sbjct: 636 NNDFGQLGDGTVTS-------------RAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLW 682
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN+ GQ N S P+ V G V LAAG GHS L
Sbjct: 683 AWGYNNVGQLGNGTSGIQSTPAQVPGLTG-VIALAAGNGHSLAL 725
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG K P +V L I +A G H+ A+ S G ++AWG
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAK---PMQVSGL--AAITALATGDGHSVAVGSDGGIWAWG 485
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG+G T R IP+ + +A G SH+L +G +
Sbjct: 486 DNRRGQLGIG-------------ITATREIPVQATGLASISALAAGDSHSLALRGNGSVW 532
Query: 124 GWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+YGQ A +++T A P D + LAAG HS L
Sbjct: 533 TWGSNAYGQLGDGTAIDRATAAQVPGLTD-----ITALAAGNHHSLAL 575
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--------VHTCALTS 56
++ WG GQLG + + P +V+ L G+ +A GG H+ AL S
Sbjct: 214 VWAWGDNGYGQLGDGTKA---QRTTPVQVLGLAGV--TALAAGGNGTTVAISAHSLALRS 268
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 115
G ++AWG AGQLG G T R P+ V+ V +A G H+L
Sbjct: 269 DGTVWAWGDNSAGQLGDGTTTE-------------RATPVQVLGLTSVTALAAGAFHSLA 315
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGG 162
DG + WG NS GQ + +T P+PV + V +AAGGG
Sbjct: 316 LRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGG 361
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + P +V L + VA H+ AL S G ++AWG
Sbjct: 164 VWAWGFNGSGQLGNGTAT---DRATPVQVPGLTSVMA--VAASEAHSLALRSDGTVWAWG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACG--------HSHTLV 115
GQLG G + + R P+ V+ GV +A G +H+L
Sbjct: 219 DNGYGQLGDGTKAQ-------------RTTPVQVLGLAGVTALAAGGNGTTVAISAHSLA 265
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
DG + WG NS GQ + +T P V + V LAAG HS L D
Sbjct: 266 LRSDGTVWAWGDNSAGQLGDGTTTERATPVQV-LGLTSVTALAAGAFHSLALRD 318
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+ G HT AL G ++AWG +GQLG G T + + +P L V
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPV---------QVPGLT---SV 195
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
VA +H+L DG + WG N YGQ + P V G V LAAGG
Sbjct: 196 MAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG-VTALAAGGNG 254
Query: 164 SAVLTDACSL 173
+ V A SL
Sbjct: 255 TTVAISAHSL 264
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + P +V L + + G +T AL S+ +++ WG
Sbjct: 731 VWGWGANSFGQLGDGTTT---PRSTPTQVPGLTNVIALN--AGAFYTVALRSERSVWEWG 785
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G T+ + P+ V V +A G++H L D +
Sbjct: 786 SKSAGQLGDGTVTQ-------------KTTPVQVSGLTDVTALAAGNAHALALRTDRTVW 832
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
WG N GQ + ++ P+PV+
Sbjct: 833 AWGGNQRGQIGDGTASI--MPAPVN 855
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + + P +V+ L + +A G H+ AL G ++AWG
Sbjct: 272 VWAWGDNSAGQLGDGTTT---ERATPVQVLGL--TSVTALAAGAFHSLALRDDGTVWAWG 326
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T + + ++ + G + H+L DG +
Sbjct: 327 NNSSGQLGDGTTTARPTPVQVPG---LTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWA 383
Query: 125 WGYN 128
WGYN
Sbjct: 384 WGYN 387
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-------GVHTCALTSK 57
++ WG S GQLG + + P +V L + G G H+ AL S
Sbjct: 322 VWAWGNNSSGQLGDGTTTA---RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 378
Query: 58 GALYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G ++AWG + Q G G P TR+ +E + G LVA G H +V
Sbjct: 379 GTVWAWGYNLSRQFGDGMPATRTTPVQVSE------------LTGGTALVA-GDLHAVVL 425
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WG NS GQ + P V + + LA G GHS +
Sbjct: 426 KSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVS-GLAAITALATGDGHSVAV 475
>gi|66816467|ref|XP_642243.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470320|gb|EAL68300.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 514
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL----DGIFIKDVACGGVHTCALTSKG 58
+Y+WG G G LGH + S DKE + P+++ + I D+ACGG H+ LT+
Sbjct: 266 LYSWGNGYFGALGH-GVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDN 324
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG-HSHTLVYM 117
+Y +G + GQLG G +IP + N N ++ + G H+++
Sbjct: 325 EIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDN----AAGNKIKSIFAGDHANSFYIT 380
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
DG ++ WG+N G + + + P + + ++K+ +G H+
Sbjct: 381 TDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ-SLSNIKKITSGFKHT 426
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGG-VHTCALTSKG 58
+IYT+G G GQLGH + + +P+R+ + G IK + G ++ +T+ G
Sbjct: 325 EIYTFGYGEFGQLGHGENDTLN-HYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDG 383
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
++Y+WG G LG G +S P + I + N ++ + G HTL
Sbjct: 384 SVYSWGWNDGGSLGHGTNENHYS--PKK---------IQSLSN-IKKITSGFKHTLAQSI 431
Query: 119 DGKIHGWGYNSYGQAA 134
+ I+ +G N++GQ A
Sbjct: 432 NNDIYVFGDNTFGQTA 447
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 30 PRRVVA-LDGIF--IKDVACGGVHTCALTSKGALYAWGGCQAGQL--GLGPQTRSFSFIP 84
P +V+ D IF K + G H L + G+LY+WG G L G+G + + P
Sbjct: 233 PIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTP 292
Query: 85 NESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ T+ N +V +ACG H++ D +I+ +GY +GQ
Sbjct: 293 KKITTFTLNNNESRIVD-----IACGGYHSMFLTNDNEIYTFGYGEFGQ 336
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 15 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSK-GALYAWGGCQAGQLGL 73
+ H L S +P ++ + I +V+ GG T LY+ G + G LG+
Sbjct: 92 EFYHWGLYSNLVTEVPNKIKINNDKKISNVSLGGNFIILQTKDDNQLYSIGKSKYGVLGI 151
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA 133
G RS + ++ + I + + + G+ H+LV +D I+GWG N Q
Sbjct: 152 G---RSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGRNHKNQL 208
Query: 134 ANEKST------------YAWYPSPV------DWCVGEVRKLAAGGGHSAVLTDACSL 173
+ +Y P+ D + +K+ +G H+ +L + SL
Sbjct: 209 GGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSL 266
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G+ S QLG S S P+ V L+G+ +K + G H+ AL++KG +Y WG
Sbjct: 115 VYAFGINSEHQLGVKS--SAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWG 172
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKIH 123
+ GQLGLG + + R +P+ + G + ++ G H+ DG ++
Sbjct: 173 SSEHGQLGLGRKKQ-------------RKLPVQLKTEGKAIAISAGAYHSAYVNTDGVLY 219
Query: 124 GWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+G +G+ N PS V G V +A GG H+ LT
Sbjct: 220 TFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALT 265
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 29/229 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG + + K P +V + G+ + VACGG HT ALT G Y++G
Sbjct: 218 LYTFGETEHGKLG--TNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFG 274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
GQLGLG + T+ ++ +P GV++ V+ G SHT ++
Sbjct: 275 DGSQGQLGLGQRV-----------THAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQM 323
Query: 123 HGWGYNSYGQAA---NEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLTDACSLKELCE 178
+ G +G+ A E + + P VD + +V++++ GG H+ VL L +
Sbjct: 324 YTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLV-VPGLTDPQG 382
Query: 179 FRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDD 227
R+ +S +S A + ++ LARL R + L + D + ++D
Sbjct: 383 NRMGDS-PISAAVQATEL-------TLARLRRRYKRALSYADLYADEND 423
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VACG H+ +T+ G +++G GQLG G T++ R + L +
Sbjct: 47 VACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKAL--------VNPRCVKALKDKRAI 97
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP--VDWCVG-EVRKLAAG 160
LVACG SHTLV D K++ +G NS Q KS+ A++ P V G +V+ L AG
Sbjct: 98 -LVACGRSHTLVATDDKKVYAFGINSEHQLG-VKSSAAYHADPQLVATLNGVQVKALTAG 155
Query: 161 GGHSAVLT 168
HS L+
Sbjct: 156 ADHSLALS 163
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G + GQLG + + +K P V AL +K ACG HT TS+G LYA G
Sbjct: 57 LFMFGSNNWGQLGLGTKTTVNK---PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACG 113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG SF + + + + PI +++A G + + +DG+++
Sbjct: 114 GNNEGQLGLGDCNDRTSF--HLVEFFNKQGPI-------KMLAAGSNTSAALTQDGRLYM 164
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
WG NS GQ K + A P V VG+ V ++ G HSA +T
Sbjct: 165 WGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYHSAFVT 207
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG S GQ+G L L P+ V +F V+CG H+ +T GALY +G
Sbjct: 162 LYMWGDNSEGQIG---LGKESNALTPQEVSVGKRVFW--VSCGYYHSAFVTVDGALYTFG 216
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+G+LGL + + +P + + +P+ V VACG HT V + + +++
Sbjct: 217 EKDSGKLGLSTEKLANHKVPQQ---------VTDIPDRVVQVACGGGHT-VALTENEVYS 266
Query: 125 WGYNSYGQAANEKSTY-AWYPSPVD-WCVGEVRKLAAGGGHSAVLTD 169
+G +GQ + + + P V+ + G V+ A G H+A++TD
Sbjct: 267 FGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD 313
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y++GLG GQLGH + + LPR V +K ACG HT +T G LY +
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESR--LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G + G+LGLG + + F P + + V V CG H LV +
Sbjct: 321 GDGRHGKLGLGEENFTNQFKPTLCPRF--------LDYHVHSVTCGGCHMLVLAK 367
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VP 100
++CG HT +T G L+ +G GQLGLG +T N P V
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV-------------NKPTCVKALKS 87
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTYAWYPSPVDWC--VGEV 154
V+L ACG +HTLV+ G ++ G N+ GQ N+++++ V++ G +
Sbjct: 88 ERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHL----VEFFNKQGPI 143
Query: 155 RKLAAGGGHSAVLT 168
+ LAAG SA LT
Sbjct: 144 KMLAAGSNTSAALT 157
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 27/172 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG + + + ++ P++V + ++ VACGG HT ALT + +Y++G
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKV-PQQVTDIPDRVVQ-VACGGGHTVALT-ENEVYSFG 268
Query: 65 GCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
Q GQLG G +F F +P + +FR V+ ACG +HT + +G
Sbjct: 269 LGQFGQLGHG----TFIFESRLPRVVE-HFRK-------GRVKHAACGENHTALITDNGL 316
Query: 122 IHGWGYNSYGQ--AANEKSTYAWYPSP----VDWCVGEVRKLAAGGGHSAVL 167
++ +G +G+ E T + P+ +D+ V + GG H VL
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDY---HVHSVTCGGCHMLVL 365
>gi|405970894|gb|EKC35758.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Crassostrea gigas]
Length = 1288
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 48/246 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G GQLGH +++ L P +V L + + + G H+ LT +G +Y++G
Sbjct: 799 VYSWGWGVHGQLGHGNIEDA---LTPTKVTFLTSLNVSHIQAGHCHSLVLTEQGVVYSFG 855
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG+G +S ++P+ V +P + +VA + H + K+
Sbjct: 856 CGFFGQLGIGNNRKS-------------SVPVKVHTLPEKIAIVATRYFHNVAVTHSNKV 902
Query: 123 HGWGYNSY---------------GQAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSA 165
+ WG + Y G+ + P VD + G + K+A G H
Sbjct: 903 YTWGCHPYNLRFVAHAARKARQAGKFMGDPVERYLLPEVVDTGYVHGRITKVAVGSSHGL 962
Query: 166 VLT---DACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEF 222
++T D S E ++ N S+ E + ++ +R HL G EF
Sbjct: 963 LMTLDGDVYSWGRNAEGQIG------NNSKYE----MKQPNIITQINDRQMAHLASGGEF 1012
Query: 223 DCDDDT 228
+ DT
Sbjct: 1013 NVTMDT 1018
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGALY 61
++YTWG S G+LGH L + P RV L + IK V+CGG HT ALT +G +Y
Sbjct: 718 ELYTWGKTSQGRLGHGDLALENTVSPPCRVETLHMLQIKVLSVSCGGEHTVALTQQG-VY 776
Query: 62 AWGGCQAGQLGLGPQ---TRSFSFI-----------PNESDTYFRNIPILVVPNGVQLVA 107
WG + GQ+G G +R + N D + V +
Sbjct: 777 GWGSSKYGQVGTGTTHIYSRPIVYSWGWGVHGQLGHGNIEDALTPTKVTFLTSLNVSHIQ 836
Query: 108 CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
GH H+LV G ++ +G +GQ + + P V ++ +A H+ +
Sbjct: 837 AGHCHSLVLTEQGVVYSFGCGFFGQLGIGNNRKSSVPVKVHTLPEKIAIVATRYFHNVAV 896
Query: 168 T 168
T
Sbjct: 897 T 897
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y+WG + GQ+G+ S + P + ++ + +A GG + ++G ++ W
Sbjct: 969 DVYSWGRNAEGQIGNNSKYEMKQ---PNIITQINDRQMAHLASGGEFNVTMDTEGLVWVW 1025
Query: 64 GGCQAGQLGL 73
G GQLG+
Sbjct: 1026 GKNDFGQLGM 1035
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
+ V G H + G LY WG G+LG G + P + I V+
Sbjct: 702 RPVGTGPQH-VGVVRNGELYTWGKTSQGRLGHGDLALENTVSPPCRVETLHMLQIKVLS- 759
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
V+CG HT+ + G ++GWG + YGQ T Y P+ + G
Sbjct: 760 ----VSCGGEHTVALTQQG-VYGWGSSKYGQVGT--GTTHIYSRPIVYSWG 803
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 29/149 (19%)
Query: 5 IYTWG-----LGSVGQLGHCSLQSG-------DKELLPRRVVALDGIF--IKDVACGGVH 50
+YTWG L V + Q+G ++ LLP VV + I VA G H
Sbjct: 902 VYTWGCHPYNLRFVAHAARKARQAGKFMGDPVERYLLPE-VVDTGYVHGRITKVAVGSSH 960
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VAC 108
+T G +Y+WG GQ+G N S + I+ N Q+ +A
Sbjct: 961 GLLMTLDGDVYSWGRNAEGQIG------------NNSKYEMKQPNIITQINDRQMAHLAS 1008
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
G + +G + WG N +GQ +K
Sbjct: 1009 GGEFNVTMDTEGLVWVWGKNDFGQLGMDK 1037
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+YTWG G G+LGH E LPR V AL G I V+ GG H A+ G LY W
Sbjct: 111 DVYTWGSGEYGKLGH---NDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCW 167
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G +A G G FIP R I + V V+CG SHT G++
Sbjct: 168 G--RAASAGSGGT--EHVFIP-------RLIKGDLEKEKVISVSCGRSHTAAVTEKGEVW 216
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG G+ + + + P V +V +A G
Sbjct: 217 TWGNGYEGELGHGEKNSQYQPKKVQSLTEKVVDVACG 253
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 61/122 (50%), Gaps = 18/122 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWGLG GQLGH G+K L + V L I VACGG HT A+T G LY
Sbjct: 320 VYTWGLGREGQLGH-----GEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYT 374
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQL-VACGHSHTLVYMRD 119
WG + GQLG G + ES +R P+ V +P G L V G H+ V +D
Sbjct: 375 WGRGRDGQLGRGGEL--------ESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLCQD 426
Query: 120 GK 121
K
Sbjct: 427 MK 428
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG G G+LGH S + P++V +L + DVACG T + G LY+
Sbjct: 214 EVWTWGNGYEGELGHGEKNS---QYQPKKVQSLTEKVV-DVACGRDFTIFVCESG-LYSC 268
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGLG ++ F+ + +V ++ G H RDG ++
Sbjct: 269 GADDYGQLGLG-RSHGERFVQTPRSLSGTGLSDVVA------ISAGDYHVCALGRDGLVY 321
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEFRLA 182
WG GQ + + PVD E+ ++A GGGH+A +T L R
Sbjct: 322 TWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDG 381
Query: 183 ESVTLSNASEIEDVAS 198
+ L E+E +AS
Sbjct: 382 Q---LGRGGELESIAS 394
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVHTCALTSKGALY 61
+Y+ G GQLG L E + +L G + DV + G H CAL G +Y
Sbjct: 265 LYSCGADDYGQLG---LGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVY 321
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG + GQLG G + P ++ RN I+ VACG HT +DG
Sbjct: 322 TWGLGREGQLGHGEKADCSLAKPVDN---LRNFEIV-------QVACGGGHTAAVTKDGV 371
Query: 122 IHGWGYNSYGQ---AANEKSTYAWYPSPVDWC---VGEVRKLAAGGGHSAVL 167
++ WG GQ +S ++ SPV G V + G HSAVL
Sbjct: 372 LYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T+GL +GQLG + D+ P V AL G I VA G T A++ G +Y WG
Sbjct: 60 LTTFGLNLIGQLGQGHERPADR---PFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWG 116
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
+ G+LG +D N+P LV + V+ G +H +DG
Sbjct: 117 SGEYGKLG-------------HNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGH 163
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLTD 169
++ WG + A + + + + P + D +V ++ G H+A +T+
Sbjct: 164 LYCWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTE 211
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 15/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG GQLG + +G+K + P V +L GI I +ACGG H+ A++ GA++ W
Sbjct: 162 ELFSWGANGYGQLGLGT--TGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 64 GGCQAGQLGLGPQ-TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL +R F P + T RN+ GV+ ++CG + ++G +
Sbjct: 220 GKNTFGQLGLNDLVSRCF---PQQLKT-LRNL-------GVRYISCGDDFSAFLTQEGGV 268
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
G ++GQ + + P V +G ++ ++A G H+
Sbjct: 269 FTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHT 311
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+ +Y WG G+LG ++ ++ LLPR + ++ ACG HT LT G L++
Sbjct: 1 MAVYCWGNTVHGELGLGGIED-EQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQLG +PN+ + ++ +V + V+CG +H+L G++
Sbjct: 60 CGNNDHGQLG-----HDTDCLPNKRPQFISSLENYIVTH----VSCGTTHSLALTNWGQV 110
Query: 123 HGWGYNSYGQAANEK--STYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG NS GQ ++ TY V ++A+G HS LT++ L
Sbjct: 111 FSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGEL 163
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++ G GQLGH + +K P+ + +L+ + V+CG H+ ALT+ G +++WG
Sbjct: 57 LFSCGNNDHGQLGHDTDCLPNKR--PQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG +++ T R I + VQ +A G H+L G++
Sbjct: 115 SNSIGQLGHDTDLQTY--------TTPRMIKTIATKTVVQ-IASGQFHSLALTNSGELFS 165
Query: 125 WGYNSYGQ----AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
WG N YGQ EK P+ V G + +A GG HS ++ +
Sbjct: 166 WGANGYGQLGLGTTGEKVV---TPTLVKSLAGIPIAFIACGGNHSFAVSKS 213
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 5 IYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
++T G G+ GQLGH CS E+LPR V L G I +ACG HT A S+G +Y
Sbjct: 268 VFTCGAGTFGQLGHGTCS-----NEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
>gi|398016945|ref|XP_003861660.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499887|emb|CBZ34961.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1755
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG+G G+LGH + + E+ PR V L F+ D +C H+ LTS GA+Y +
Sbjct: 786 EVYTWGVGRNGRLGH---GTDNSEVKPRLVEGLRSSFVVDASCSNAHSAVLTSTGAVYVF 842
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL R +P +V +P V C HT + + DG +
Sbjct: 843 GENSEGQLGL-------------RGRAPRRLPTMVPLPMKAVAVTCAREHTCILLADGDV 889
Query: 123 HGWG 126
G
Sbjct: 890 VACG 893
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ VACG T LT GALY+ G GQLG+G + +S + + + + +L
Sbjct: 595 VAQVACGLAVTYVLTVDGALYSCGRADNGQLGIGECSVRYS---DAGVSKLQRV-LLKDN 650
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V +A G + + D ++ WG+N YGQ
Sbjct: 651 ERVTRIAAGTACAMALTGDSALYCWGHNVYGQ 682
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+HL+ ++ WG GQLG ++ S +P +V L G+ VA G H+ AL + G
Sbjct: 626 VHLNGTVWVWGNNDFGQLGDGTVTS---RAMPVQVSGLTGV--TAVAVGVYHSLALRNDG 680
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L+AWG GQLG G T P + +P L GV +A G+ H+L
Sbjct: 681 TLWAWGYNNVGQLGNG--TSGIQSTPAQ-------VPGLT---GVIALAAGNGHSLALRT 728
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
DG + GWG NS+GQ + +T P+ V
Sbjct: 729 DGTVWGWGANSFGQLGDGTTTPRSTPTQV 757
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG ++ S P +V L + + V G H+ A+ G ++ WG
Sbjct: 582 VWVWGSNDFGQLGDGTVTS---RKTPVQVSGLSAM--RAVEAGPAHSVAVHLNGTVWVWG 636
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T R +P+ V GV VA G H+L DG +
Sbjct: 637 NNDFGQLGDGTVTS-------------RAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLW 683
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN+ GQ N S P+ V G V LAAG GHS L
Sbjct: 684 AWGYNNVGQLGNGTSGIQSTPAQVPGLTG-VIALAAGNGHSLAL 726
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 28/168 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG K P +V L I +A G H+ A+ S G ++AWG
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAK---PMQVSGL--AAITALATGDGHSVAVGSDGGIWAWG 486
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG+G T R IP+ + +A G SH+L +G +
Sbjct: 487 DNRRGQLGIG-------------ITATREIPVQATGLASISALAAGDSHSLALRGNGSVW 533
Query: 124 GWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+YGQ A +++T A P D + LAAG HS L
Sbjct: 534 TWGSNAYGQLGDGTAIDRATAAQVPGLTD-----ITALAAGNHHSLAL 576
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--------VHTCALTS 56
++ WG GQLG + + P +V+ L G+ +A GG H+ AL S
Sbjct: 215 VWAWGDNGYGQLGDGTKA---QRTTPVQVLGLAGV--TALAAGGNGTTVAISAHSLALRS 269
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 115
G ++AWG AGQLG G T R P+ V+ V +A G H+L
Sbjct: 270 DGTVWAWGDNSAGQLGDGTTTE-------------RATPVQVLGLTSVTALAAGAFHSLA 316
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGG 162
DG + WG NS GQ + +T P+PV + V +AAGGG
Sbjct: 317 LRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGG 362
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + P +V L + VA H+ AL S G ++AWG
Sbjct: 165 VWAWGFNGSGQLGNGTAT---DRATPVQVPGLTSVMA--VAASEAHSLALRSDGTVWAWG 219
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACG--------HSHTLV 115
GQLG G + + R P+ V+ GV +A G +H+L
Sbjct: 220 DNGYGQLGDGTKAQ-------------RTTPVQVLGLAGVTALAAGGNGTTVAISAHSLA 266
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
DG + WG NS GQ + +T P V + V LAAG HS L D
Sbjct: 267 LRSDGTVWAWGDNSAGQLGDGTTTERATPVQV-LGLTSVTALAAGAFHSLALRD 319
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V+ G HT AL G ++AWG +GQLG G T + + +P L V
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPV---------QVPGLT---SV 196
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
VA +H+L DG + WG N YGQ + P V G V LAAGG
Sbjct: 197 MAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG-VTALAAGGNG 255
Query: 164 SAVLTDACSL 173
+ V A SL
Sbjct: 256 TTVAISAHSL 265
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + P +V L + + G +T AL S+ +++ WG
Sbjct: 732 VWGWGANSFGQLGDGTTT---PRSTPTQVPGLTNVIALN--AGAFYTVALRSERSVWEWG 786
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G T+ + P+ V V +A G++H L D +
Sbjct: 787 SKSAGQLGDGTVTQ-------------KTTPVQVSGLTDVTALAAGNAHALALRTDRTVW 833
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVD 148
WG N GQ + ++ P+PV+
Sbjct: 834 AWGGNQRGQIGDGTASI--MPAPVN 856
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + + P +V+ L + +A G H+ AL G ++AWG
Sbjct: 273 VWAWGDNSAGQLGDGTTT---ERATPVQVLGL--TSVTALAAGAFHSLALRDDGTVWAWG 327
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G T + + ++ + G + H+L DG +
Sbjct: 328 NNSSGQLGDGTTTARPTPVQVPG---LTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWA 384
Query: 125 WGYN 128
WGYN
Sbjct: 385 WGYN 388
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-------GVHTCALTSK 57
++ WG S GQLG + + P +V L + G G H+ AL S
Sbjct: 323 VWAWGNNSSGQLGDGTTTA---RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 379
Query: 58 GALYAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
G ++AWG + Q G G P TR+ +E + G LVA G H +V
Sbjct: 380 GTVWAWGYNLSRQFGDGMPATRTTPVQVSE------------LTGGTALVA-GDLHAVVL 426
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
DG + WG NS GQ + P V + + LA G GHS +
Sbjct: 427 KSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVS-GLAAITALATGDGHSVAV 476
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + L+P RV L G+ + ++ G H+ A S G L+AWG
Sbjct: 470 VWAWGGNSFGQLGEGTTS---NALVPVRVRGLSGV--ETISAGFNHSLARASDGGLWAWG 524
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + S ++P+ V +GV V G +H+L DG +
Sbjct: 525 GNYTGQLGDGTTSNS-------------SVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVW 571
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG NS+GQ + ++ P V G + +AAG HS
Sbjct: 572 AWGINSFGQLGEGTTNTSFAPVRVQGLSG-METVAAGSLHS 611
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQL H S + +P V L G+ VA G +H+ A+ S G+++AWG
Sbjct: 370 VWTWGYNHDGQLAHGST---NDSPVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWG 424
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG G + S P+ V +GV V+ G +H+L DG +
Sbjct: 425 YNRQGQLGDGSLSSSAE-------------PVRVQGLSGVAAVSAGLNHSLARGTDGGVW 471
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG NS+GQ ++ A P V G V ++AG HS
Sbjct: 472 AWGGNSFGQLGEGTTSNALVPVRVRGLSG-VETISAGFNHS 511
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG SL S + P RV L G+ V+ G H+ A + G ++AWG
Sbjct: 420 VWAWGYNRQGQLGDGSLSSSAE---PVRVQGLSGV--AAVSAGLNHSLARGTDGGVWAWG 474
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLG G T S + +P R + +GV+ ++ G +H+L DG +
Sbjct: 475 GNSFGQLGEG--TTSNALVP----VRVRGL------SGVETISAGFNHSLARASDGGLWA 522
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N GQ + ++ + P V G V + AG HS AV TD
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLSG-VAAVFAGLNHSLAVRTDGS 569
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG ++ + LP++V L G+ + G H+ S G+++AWG
Sbjct: 168 VWAWGDNFAGQLGDGNILT--TRWLPKQVQGLSGVVAA--SAGWAHSMVALSDGSVWAWG 223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG G + +P + GV VA G ++L DG +
Sbjct: 224 NNTSGQLGNGISV-GYGALPEQVQGL----------RGVMAVAAGGLYSLALRSDGTLWA 272
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N +GQ + + Y V W G V +AAG HS AV +D
Sbjct: 273 WGSNDHGQRGDGSTVYLSSSVRVRWLSGVV-AMAAGSAHSLAVRSDGT 319
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 1 MHLD--IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+H D ++ WG ++GQLG + D P RV L G+ V+ G H+ AL S G
Sbjct: 61 LHRDGTVWAWGDNALGQLGDGT---SDSHSEPVRVPGLSGVVA--VSAGDNHSLALRSDG 115
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+++AWG + QLG P +S+S +P ++ +V VA G +H+L
Sbjct: 116 SVWAWGDNNSDQLGGAPGAQSYS-VPWR----LEDLSEVVA------VAAGGNHSLAVRA 164
Query: 119 DGKIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVGEVRKLAAGGGHSAV-LTDAC 171
DG + WG N GQ + T W P V G V +AG HS V L+D
Sbjct: 165 DGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVV-AASAGWAHSMVALSDGS 218
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG ++GQLG S D P RV L G+ V+ G H+ AL G ++AWG
Sbjct: 17 VWAWGGNALGQLGDG---SSDSHSEPVRVRGLSGVVA--VSAGEGHSLALHRDGTVWAWG 71
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G ++S + +P L +GV V+ G +H+L DG +
Sbjct: 72 DNALGQLGDG---------TSDSHSEPVRVPGL---SGVVAVSAGDNHSLALRSDGSVWA 119
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC---VGEVRKLAAGGGHS-AVLTDAC 171
WG N+ Q + Y P W + EV +AAGG HS AV D
Sbjct: 120 WGDNNSDQLGGAPGAQS-YSVP--WRLEDLSEVVAVAAGGNHSLAVRADGT 167
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + + D P+RV L + VA G H+ AL + G ++ WG
Sbjct: 320 LWAWGANYYGQLGDGTRKDHDT---PKRVQGLSRVVA--VAAGDGHSIALCADGTVWTWG 374
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQL G S +P+ V +GV VA G H+L + DG +
Sbjct: 375 YNHDGQLAHGSTNDS-------------PVPLHVRELSGVVAVAAGALHSLAVLSDGSVW 421
Query: 124 GWGYNSYGQ 132
WGYN GQ
Sbjct: 422 AWGYNRQGQ 430
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQ G S + RV L G+ +A G H+ A+ S G L+AWG
Sbjct: 270 LWAWGSNDHGQRGDGSTVYLSSSV---RVRWLSGVVA--MAAGSAHSLAVRSDGTLWAWG 324
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G TR P R V VA G H++ DG +
Sbjct: 325 ANYYGQLGDG--TRKDHDTPKRVQGLSR----------VVAVAAGDGHSIALCADGTVWT 372
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHS-AVLTDAC 171
WGYN GQ A+ + SPV V E V +AAG HS AVL+D
Sbjct: 373 WGYNHDGQLAHGSTN----DSPVPLHVRELSGVVAVAAGALHSLAVLSDGS 419
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ S GQLG + + P RV L G+ + VA G +H+ ++ S G++++WG
Sbjct: 570 VWAWGINSFGQLGEGTT---NTSFAPVRVQGLSGM--ETVAAGSLHSLSVGSDGSMWSWG 624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNI 94
GQLG G +P S T R++
Sbjct: 625 NNHHGQLGHG--------LPGRSPTPVRSL 646
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G H+ AL G ++AWGG GQLG G SD++ + + + +GV
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDG-----------SSDSHSEPVRVRGL-SGV 48
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
V+ G H+L RDG + WG N+ GQ + S P V G V ++AG H
Sbjct: 49 VAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVV-AVSAGDNH 107
Query: 164 SAVL 167
S L
Sbjct: 108 SLAL 111
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG Q + P RV L + + D+A GG H+ ALT +G +Y WG
Sbjct: 222 LWAWGNNEYGQLGTGDTQPRSQ---PIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWG 278
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ G+LG G +S +P + + +L + VQ V+CG +H++ RDG +
Sbjct: 279 RGEHGRLGFGDSDKSSKMVP-------QKVQLLAGEDIVQ-VSCGGTHSVALTRDGHMFS 330
Query: 125 WGYNSYGQ 132
+G +G+
Sbjct: 331 FGRGDHGR 338
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 81/212 (38%), Gaps = 47/212 (22%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG LGH +S +K E P +V AL + I A GG H A+ +G YA
Sbjct: 59 LFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYA 118
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPILVV--------------------- 99
WGG + GQ G P+ + + P D R P LVV
Sbjct: 119 WGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWT 178
Query: 100 -----PNG----------------VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
P G V+L+A G H L DG + WG N YGQ +
Sbjct: 179 WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 238
Query: 139 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
P V + +AAGG HS LTD
Sbjct: 239 QPRSQPIRVQGLSDLTLVDIAAGGWHSTALTD 270
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H I WG G GQLG S + + L V AL I+ V G ++ A+ G L+
Sbjct: 4 HSHIIAWGSGEDGQLGIGSNEEKEWVCL---VKALQPHRIRSVVAGSRNSLAIADDGKLF 60
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG Q LG +T+S N+++ + L VQ A G H L G+
Sbjct: 61 TWGWNQRATLGHPAETKS----ENKTENTPSQVKALSSVKIVQ-AAIGGWHCLAVDDQGR 115
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV-------DWCVGE--VRKLAAGGGHSAVLT 168
+ WG N YGQ E P+ C + VR++AAGG HS VLT
Sbjct: 116 AYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLT 171
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LG K ++P++V L G I V+CGG H+ ALT G ++++
Sbjct: 273 EVYGWGRGEHGRLGFGDSDKSSK-MVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSF 331
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
G G+LG G + + + D P G +LVACG HTL +
Sbjct: 332 GRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHTLAIV 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P RV L+ + + +A G H AL G L+AWG + GQLG G D
Sbjct: 193 VPVRVQGLENVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTG-------------D 237
Query: 89 TYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKSTYAW 142
T R+ PI V + + LV A G H+ +G+++GWG +G+ ++KS+
Sbjct: 238 TQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKM- 296
Query: 143 YPSPVDWCVGE-VRKLAAGGGHSAVLT 168
P V GE + +++ GG HS LT
Sbjct: 297 VPQKVQLLAGEDIVQVSCGGTHSVALT 323
>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2063
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++TWG+G G+LGH GD+ + PR V L I VA G HT A + G LY+
Sbjct: 30 LFTWGMGRYGRLGH-----GDETDQNAPRLVGELLNTNIVGVALGERHTAAFSETGELYS 84
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL------VVPNGVQLVACGHSHTLVY 116
WG G LG G E D + P L V+ V VACG HTL
Sbjct: 85 WGDANFGVLGHGEL--------QEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHTLCT 136
Query: 117 MRDGKIHGWGYNSYGQAANEKS---TYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACS 172
D + WG +G T W P + G V+++A G H AVL D
Sbjct: 137 TADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQQIACGWAHCAVLMDTGD 196
Query: 173 L 173
L
Sbjct: 197 L 197
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 17/119 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D+YTWG G+ G+LGH GD+E P +V +L G I +ACG H AL+ KG ++
Sbjct: 196 DLYTWGEGAGGRLGH-----GDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSDKGEVF 250
Query: 62 AWG-GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLV 115
G GC G+LGL G Q +S P ++ + IP V P G+Q+ VACG T+V
Sbjct: 251 VCGTGC--GRLGLDGEQGKSN---PEHTEVANQKIPRRVEPLRGLQILQVACGMISTIV 304
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 15/173 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDV---ACGGVHTCALTSKG 58
++Y+WG + G LGH LQ GD ++ P+ + L + K V ACG HT T+
Sbjct: 81 ELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHTLCTTADK 140
Query: 59 ALYAWGGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
Y WG G LG G R+ + P + GVQ +ACG +H V M
Sbjct: 141 LTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGA--------LAGRGVQQIACGWAHCAVLM 192
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G ++ WG + G+ + P V G + ++A G H A L+D
Sbjct: 193 DTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSD 245
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 32 RVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYF 91
+V +L I I VACG HT A+++KG L+ WG + G+LG G +E+D
Sbjct: 2 QVASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHG----------DETD--- 48
Query: 92 RNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYG 131
+N P LV + + VA G HT + G+++ WG ++G
Sbjct: 49 QNAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFG 91
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G ++G+LG QS P+ V AL + V+CG HTCA+ G L++WG
Sbjct: 43 LYTMGSNALGKLG-IGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWG 101
Query: 65 GCQAGQLGLGPQTRSFS-FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+ ++ + N SD + I V V+CG+ HT+ +++G++
Sbjct: 102 DSSEGQLGINSNGSHYNPQLVNFSD--LKGINTFVTD-----VSCGYYHTVAVLKNGQVC 154
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G GQ + P ++ + ++ K+ G H+ L ++
Sbjct: 155 SFGSGKKGQLGTGNQNKQYKPFLLN-SLSQIIKVKCGFYHTLFLDES 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGI--FIKDVACGGVHTCALTSKGA 59
++++WG S GQLG + S P+ V L GI F+ DV+CG HT A+ G
Sbjct: 96 ELFSWGDSSEGQLG---INSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQ 152
Query: 60 LYAWGGCQAGQLGLGPQTRSFS-FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+ ++G + GQLG G Q + + F+ N + V CG HTL
Sbjct: 153 VCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQIIK-------------VKCGFYHTLFLDE 199
Query: 119 DGKIHGWGYN---SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
G+++ G N GQ NE + + P V K G HSA +TDA
Sbjct: 200 SGRVYSCGLNDEGQLGQGHNEGNISS--PRLVLELEHSFIKKIFAGSHSAAITDA 252
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
I I +ACG HT + G LY G G+LG+G Q+ SF P + +
Sbjct: 22 IVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQP--------QLVSAL 73
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
V V+CGHSHT + G++ WG +S GQ + + P V++
Sbjct: 74 SKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNF 124
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ GL GQLG + PR V+ L+ FIK + G H+ A+T +Y +G
Sbjct: 203 VYSCGLNDEGQLGQGHNEGNISS--PRLVLELEHSFIKKIFAGS-HSAAITDANEIYFFG 259
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQ L PQ + + V ++ G+ + DGK++
Sbjct: 260 KSQLGQF-LYPQL------------------VRICQGDVNEISIGNHFGVAVTYDGKVYS 300
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLAE 183
WG N GQ S PS V+ + E + ++A G + V+ L ++ RLA+
Sbjct: 301 WGINQQGQLGQGDSDVRIIPSLVE-PLNEKKVISATCGENYVIC----LGQVMNSRLAK 354
>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
Length = 286
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALT-SKGALY 61
+ +WG G GQLGH GD E +P V ALDG I V CG HT A + S+ +Y
Sbjct: 35 VCSWGRGEDGQLGH-----GDAEDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVY 89
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 119
+WG G+LG G S FIP+ T G+Q+ +ACG SH L +
Sbjct: 90 SWGWGDFGRLGHG--NSSDLFIPHAIKTL----------QGLQIKQIACGDSHCLAVTIN 137
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLT 168
G++ WG N GQ + +P V EV +++ G H+ +T
Sbjct: 138 GEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAIT 187
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
L +Y+WG G G+LGH + S D +P + L G+ IK +ACG H A+T G + +
Sbjct: 86 LVVYSWGWGDFGRLGHGN--SSDL-FIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQS 142
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLG+G + D F L V V+CG HT+ +
Sbjct: 143 WGRNQNGQLGVG----------DNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNV 192
Query: 123 HGWGYNSYGQ 132
WG + GQ
Sbjct: 193 FSWGRGTSGQ 202
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ +WG GQLG + P+RV + V+CG HT A+T K +++W
Sbjct: 139 EVQSWGRNQNGQLG---VGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSW 195
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
G +GQLG G D RN+P+L+ V AC T
Sbjct: 196 GRGTSGQLGHG-------------DILDRNMPVLIEALSVDGSACEQIQT 232
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NG 102
++ G HT AL + + +WG + GQLG G D R +P V +G
Sbjct: 19 ISAGASHTVALVAGNLVCSWGRGEDGQLGHG-------------DAEDRPMPTFVSALDG 65
Query: 103 VQL--VACGHSHTLVYMRDGK--IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 157
++ V CG HT Y D + ++ WG+ +G+ + S+ + P + G +++++
Sbjct: 66 CEITSVICGADHTTAY-SDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQI 124
Query: 158 AAGGGHSAVLT 168
A G H +T
Sbjct: 125 ACGDSHCLAVT 135
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + D +P +V L G+ VA GG H+ A+ S G+++AWG
Sbjct: 169 VWAWGRNTSGQLGDGTR---DDRAVPVQVTGLSGVV--SVAAGGNHSLAVRSDGSVWAWG 223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+GQLG P+ ++ D +GV VA G H+L DG +
Sbjct: 224 NNASGQLGGAPEA-AYPVPWRVEDV-----------SGVVAVAAGQYHSLAVRYDGTVWA 271
Query: 125 WGYNSYGQAANEK--STYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N YGQ + K W P V +G V ++AG HS V+
Sbjct: 272 WGDNLYGQLGDGKLEGNSRWLPKQVP-GLGGVVAVSAGFYHSLVV 315
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG L+ G+ LP++V L G+ V+ G H+ + S G ++AWG
Sbjct: 269 VWAWGDNLYGQLGDGKLE-GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWG 325
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G + + S P+ V+ +G VA G+ H+LV DG +
Sbjct: 326 NNAYGQLGGGSRAHAAS-------------PVQVLGVSGAVAVAAGYRHSLVVNSDGTLW 372
Query: 124 GWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N GQ + T YP+P V G V +AAGGGH A+L+D
Sbjct: 373 AWGSNLDGQRGDGTLTR--YPTPGRVPGLSGVV-SVAAGGGHVLALLSDGT 420
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + S +PR+V L G+ VA G + A+ G++++WG
Sbjct: 421 VWAWGDNASGQLGDGTRHS---RWVPRQVPELSGVVA--VAAGSSFSLAVRYDGSVWSWG 475
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G + S +P + R + +V VA G H L DG + G
Sbjct: 476 DNAYGQLGHG--STDASSVP----LHVRELSEVVA------VAAGSMHALAVRADGTVWG 523
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 524 WGFNDYGQ 531
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + P +V L G+ VA H+ A+ + G ++AWG
Sbjct: 521 VWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMV--SVAADFGHSLAVRADGTVWAWG 578
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
+LG G TR R +P+ V P V L++ G+++++ DG +
Sbjct: 579 NNTDSELGDGTTTR-------------RLVPLRVNAPGTVALLSAGYNYSMAMRADGSLW 625
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHS 164
WG N GQ + +T P V G VR LAAG HS
Sbjct: 626 AWGTNFAGQLGDGSTTSRAVPVRVQ---GPVRASTLAAGQSHS 665
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG S P +V+ + G VA G H+ + S G L+AWG
Sbjct: 321 VWAWGNNAYGQLGGGSRA---HAASPVQVLGVSGAVA--VAAGYRHSLVVNSDGTLWAWG 375
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQ G G TR P +P L +GV VA G H L + DG +
Sbjct: 376 SNLDGQRGDGTLTR----YPTPG-----RVPGL---SGVVSVAAGGGHVLALLSDGTVWA 423
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N+ GQ + W P V
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQV 446
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 12 SVGQLGHCSLQSGDKELLPRRV-VALDGIF-IKDVACGGVHTCALTSKGALYAWGGCQAG 69
+ G GH L GD L RR V + G+ + VA G H+ AL G ++AWG G
Sbjct: 71 TTGGNGHGQL--GDGTTLSRRTPVQVQGLSGVAAVAAGHGHSLALRYDGTVWAWGNNAYG 128
Query: 70 QLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYN 128
QLG TR R +P+ V +GV V G +H+L DG + WG N
Sbjct: 129 QLG--DDTRDN-----------RTVPVQVTGLSGVVSVVAGDTHSLAVRSDGSVWAWGRN 175
Query: 129 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
+ GQ + P V G V +AAGG HS AV +D
Sbjct: 176 TSGQLGDGTRDDRAVPVQVTGLSGVV-SVAAGGNHSLAVRSDGS 218
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 19/137 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + +LG + + L+P RV A + + ++ G ++ A+ + G+L+AWG
Sbjct: 574 VWAWGNNTDSELGDGTTT---RRLVPLRVNAPGTVAL--LSAGYNYSMAMRADGSLWAWG 628
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
AGQLG G T R +P+ V P +A G SH++ DG +
Sbjct: 629 TNFAGQLGDGSTTS-------------RAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLW 675
Query: 124 GWGYNSYGQAANEKSTY 140
WG+N GQ + T+
Sbjct: 676 AWGFNFEGQLGDGTLTH 692
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S S +P RV + +A G H+ A+ S G L+AWG
Sbjct: 624 LWAWGTNFAGQLGDGSTTS---RAVPVRVQGP--VRASTLAAGQSHSMAVGSDGFLWAWG 678
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G T +P+ V +GV V + +L DG +
Sbjct: 679 FNFEGQLGDGTLTH-------------HALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLW 725
Query: 124 GWGYNSYGQAANEKSTY 140
WG N GQ + STY
Sbjct: 726 AWGNNDVGQLGTQPSTY 742
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 50 HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVAC 108
H+ A+ G ++ GG GQLG + T R P+ V +GV VA
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLG-------------DGTTLSRRTPVQVQGLSGVAAVAA 105
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
GH H+L DG + WG N+YGQ ++
Sbjct: 106 GHGHSLALRYDGTVWAWGNNAYGQLGDDT 134
>gi|307190578|gb|EFN74560.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1036
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 26 KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
KE +V L+ +I D+ACG H ALTS G +Y WG GQ+ G +F +P
Sbjct: 599 KESTFTKVPRLEKKYILDIACGHCHCLALTSDGKVYTWGENYCGQIEDG-NIDTFDSVP- 656
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS-TYAWYP 144
R + + V +ACG +V + KI+GWG N GQ + +S Y YP
Sbjct: 657 ------RQVHHELEKKNVVHIACGSKFNVVITDENKIYGWGKNDKGQISIVQSEKYYAYP 710
Query: 145 SPVDWCVGEVRKLAAGGGHSAVLTD 169
+ ++ K+ G H+ LT+
Sbjct: 711 QEIITISDKIVKVTCGYDHTLALTN 735
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG GQ+ ++ + D +PR+V L+ + +ACG +T + +Y W
Sbjct: 633 VYTWGENYCGQIEDGNIDTFDS--VPRQVHHELEKKNVVHIACGSKFNVVITDENKIYGW 690
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ+ + + +++ P E I+ + + + V CG+ HTL G+I+
Sbjct: 691 GKNDKGQISIVQSEKYYAY-PQE---------IITISDKIVKVTCGYDHTLALTNKGEIY 740
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVL 167
WG N YGQ K P V+ +G+V +AA G S +
Sbjct: 741 AWGDNIYGQIGVNKKLKRSGPIMVNVPEMGKVLDIAAFGDLSVAV 785
>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
Y-400-fl]
Length = 790
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG ++ S + P V L+ + +A G HTCALT+ G + WG
Sbjct: 244 WGDNLEGQLGGGTIYS---HITPVDVAGLES-DVAAIAVGWEHTCALTTVGGVRCWGNNS 299
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKIHGW 125
+GQLG G T RN+P+ V+ +GV + G HT G + W
Sbjct: 300 SGQLGDGTMTE-------------RNVPVGVIGLESGVTAITAGGGHTCALTTGGGVKCW 346
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELC-----EFR 180
G N YGQ N + P V V +AAGG H+ LT + +K C + +
Sbjct: 347 GNNFYGQLGNVTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVK--CWGYNYDVQ 404
Query: 181 LAESVTLSNASEIE 194
L + T + ++ ++
Sbjct: 405 LGDGTTTARSTPVD 418
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG ++ + P VV L+ + +A GG HTCALT+ G + WG
Sbjct: 91 WGDNSSGQLGDGTM---NDRNTPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANV 146
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
+GQLG Q IP Y + ++ + GV + G HT G + WG
Sbjct: 147 SGQLGNETQ------IP-----YSAPVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGD 195
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
NS GQ + + P V V +AAG GH+ LT + +K
Sbjct: 196 NSSGQLGDGTTNDRNTPVDVAGLESGVAAIAAGEGHTCALTTSGGVK 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 22/195 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG ++ + +P V+ L+ + + GG HTCALT+ G + WG
Sbjct: 295 WGNNSSGQLGDGTMT---ERNVPVGVIGLES-GVTAITAGGGHTCALTTGGGVKCWGNNF 350
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGKIHGW 125
GQLG + IP+ V G+ +VA G +HT G + W
Sbjct: 351 YGQLG-------------NVTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKCW 397
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK---ELCEFRLA 182
GYN Q + +T P V +V + AGG H+ LT + +K F+L
Sbjct: 398 GYNYDVQLGDGTTTARSTPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLG 457
Query: 183 ESVTLSNASEIEDVA 197
+ + + ++ +
Sbjct: 458 DGTMIDRNTPVDVIG 472
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV- 99
I +A G HTCALT+ G + WG +GQLG G RN P+ VV
Sbjct: 69 ITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMND-------------RNTPVDVVG 115
Query: 100 -PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGE-VRK 156
+GV +A G SHT +G + WG N GQ NE T Y +PVD +G V
Sbjct: 116 LESGVAAIAAGGSHTCALTTNGGVKCWGANVSGQLGNE--TQIPYSAPVDVVELGRGVFD 173
Query: 157 LAAGGGHSAVLTDACSLK---ELCEFRLAESVTLSNASEIEDVASRTGSEALA 206
+ AG H+ LT +K + +L + T + ++ +G A+A
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESGVAAIA 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 21 LQSGDKELLPRRV-VALDGIF--IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQT 77
+Q GD R V + G+ + + GG HTCALT+ G + WG
Sbjct: 403 VQLGDGTTTARSTPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWG------------- 449
Query: 78 RSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
R+F+F + RN P+ V+ G V + G +HT + WG N YGQ +
Sbjct: 450 RNFNFQLGDGTMIDRNTPVDVIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGH 509
Query: 136 EKSTYAWYPSPVDWC--VGEVRKLAAGGGHS-AVLTDA 170
T +Y +PVD G+V +AAG H+ A++TD
Sbjct: 510 --GTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDG 545
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLGH ++ + P V+ L+G + +A G HTCAL + G + WG
Sbjct: 499 WGSNLYGQLGHGTM---NFYGTPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWGAND 554
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
+GQLG G TRS IP + + + +GV + G HT G + WG
Sbjct: 555 SGQLGDG--TRSDRSIP---------VDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGS 603
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
NS Q N + P V V + AG H+ LT
Sbjct: 604 NSSWQLGNITVGQPYIPVDVFGLWSGVTAITAGLHHTCALT 644
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 69/169 (40%), Gaps = 19/169 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG + + P V L+ + +A G HTCALT+ G + WG
Sbjct: 193 WGDNSSGQLGDGTT---NDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGVKCWGDNL 248
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G Y P+ V + + V +A G HT G + W
Sbjct: 249 EGQLGGGT-------------IYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVRCW 295
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
G NS GQ + T P V V + AGGGH+ LT +K
Sbjct: 296 GNNSSGQLGDGTMTERNVPVGVIGLESGVTAITAGGGHTCALTTGGGVK 344
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 20 SLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGP 75
+ Q GD ++ P V+ L G + + GG HTCALT+ + WG GQLG G
Sbjct: 453 NFQLGDGTMIDRNTPVDVIGL-GSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHG- 510
Query: 76 QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN 135
T +F P + ++ + V +A G HT M DG + WG N GQ +
Sbjct: 511 -TMNFYGTP---------VDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGD 560
Query: 136 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
+ P V V + AG H+ LT + +K
Sbjct: 561 GTRSDRSIPVDVSGLGSGVAAITAGLFHTCALTTSGGVK 599
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + + P+ V+ L+G +A GG HTCALT G + WG
Sbjct: 650 VQCWGGNYDGQLGDGTT---NLRRFPQTVIGLEGSETA-IAAGGAHTCALTVSGGMKCWG 705
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKI 122
GQLG G + R+ P+ V+ + V +A G HT D +
Sbjct: 706 DNFYGQLGDGSM-------------HDRSTPVDVIRLESNVDAIAAGFFHTCALTTDKGV 752
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVD 148
WG N Y Q + + W PVD
Sbjct: 753 KCWGDNFYAQLGDGRP--LWRSVPVD 776
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 19/169 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG+ + + +P V L GI + +A GG HTCALT+ G + WG
Sbjct: 346 WGNNFYGQLGNVTAH---QPGIPVDVAGL-GIGVVAIAAGGAHTCALTTSGGVKCWGYNY 401
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGW 125
QLG G T R+ P+ V + + V + G +HT G + W
Sbjct: 402 DVQLGDGTTTA-------------RSTPVDVSGLESDVVTITAGGAHTCALTTSGGVKCW 448
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
G N Q + P V V + AGG H+ LT + +K
Sbjct: 449 GRNFNFQLGDGTMIDRNTPVDVIGLGSRVTAITAGGNHTCALTTSDGVK 497
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG GQLG + D+ + P V L G + + G HTCALT+ G + WG
Sbjct: 550 WGANDSGQLGDGTRS--DRSI-PVDVSGL-GSGVAAITAGLFHTCALTTSGGVKCWGSNS 605
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGKIHGWG 126
+ Q LG T +IP + + + +GV + G HT ++ WG
Sbjct: 606 SWQ--LGNITVGQPYIP---------VDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWG 654
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
N GQ + + +P V G +AAGG H+ LT + +K
Sbjct: 655 GNYDGQLGDGTTNLRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMK 702
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 20/170 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAWGGC 66
WG S QLG+ ++ + +P V L + + G HTCALT+ A + WGG
Sbjct: 601 WGSNSSWQLGNITV---GQPYIPVDVFGLWS-GVTAITAGLHHTCALTTGSAQVQCWGGN 656
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG + T R P V+ +A G +HT G +
Sbjct: 657 YDGQLG-------------DGTTNLRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKC 703
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
WG N YGQ + P V V +AAG H+ LT +K
Sbjct: 704 WGDNFYGQLGDGSMHDRSTPVDVIRLESNVDAIAAGFFHTCALTTDKGVK 753
>gi|383459913|ref|YP_005373902.1| hypothetical protein COCOR_07957 [Corallococcus coralloides DSM
2259]
gi|380731837|gb|AFE07839.1| hypothetical protein COCOR_07957 [Corallococcus coralloides DSM
2259]
Length = 767
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WGL + GQLG S GD EL + + ++ G HTCAL G + WG
Sbjct: 570 WGLNNHGQLGQLHYNSIGDDELPNSQTPFEPAGPVSQISAGTSHTCALLKTGTVRCWGYN 629
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQ+G G + SF FR+ + + ++ G HT + G + WG
Sbjct: 630 GNGQMGTGQNSGSF---------LFRDSGSIDLGTSALQISAGSHHTCALLSTGGVRCWG 680
Query: 127 YNSYGQAANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHS 164
YN+YGQ +T + P P VD +++A GHS
Sbjct: 681 YNAYGQLGYGNTTARFTPGPAVDLDGATAYQVSASTGHS 719
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRR-VVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WGL + GQLG+ S Q+ GD E + V L G I+ +A GG H+CA+ + G + WG
Sbjct: 457 WGLNTYGQLGYNSTQNLGDGEPVASFGYVNLGGPAIR-IAVGGEHSCAVMATGKVRCWGR 515
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG G + S NE ++ + V V G +HT + + K+ W
Sbjct: 516 NHYGQLGYG---HNNSIGDNEQPWSAGDVNLGSVT--ATDVVVGENHTCALLSNDKMLCW 570
Query: 126 GYNSYGQ 132
G N++GQ
Sbjct: 571 GLNNHGQ 577
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 58/135 (42%), Gaps = 25/135 (18%)
Query: 8 WGLGSVGQLGHCSLQS-GDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG G GQLG+ + Q+ GD EL V + G K +A GG HTCAL G + WG
Sbjct: 401 WGYGVYGQLGYENTQNIGDNELPYTAGAVKILGKATK-LAVGGNHTCALLDTGLVRCWGL 459
Query: 66 CQAGQLGL--------GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
GQLG G SF ++ N R +A G H+ M
Sbjct: 460 NTYGQLGYNSTQNLGDGEPVASFGYV-NLGGPAIR-------------IAVGGEHSCAVM 505
Query: 118 RDGKIHGWGYNSYGQ 132
GK+ WG N YGQ
Sbjct: 506 ATGKVRCWGRNHYGQ 520
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 8 WGLGSVGQLGHCSLQS-GDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALYAWG 64
WG GQLG+ S GD E P V L + DV G HTCAL S + WG
Sbjct: 513 WGRNHYGQLGYGHNNSIGDNEQ-PWSAGDVNLGSVTATDVVVGENHTCALLSNDKMLCWG 571
Query: 65 GCQAGQLG-LGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKI 122
GQLG L + +PN S T F P G V ++ G SHT ++ G +
Sbjct: 572 LNNHGQLGQLHYNSIGDDELPN-SQTPFE-------PAGPVSQISAGTSHTCALLKTGTV 623
Query: 123 HGWGYNSYGQ 132
WGYN GQ
Sbjct: 624 RCWGYNGNGQ 633
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 74 GPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
G T ++ P++ F + P+ P +G+ V G HT + DG + WGY YGQ
Sbjct: 353 GTTTLTYKLTPDQ----FPDNPVAEGPLDGINSVRNGTDHTCALLNDGSVRCWGYGVYGQ 408
Query: 133 AANEKSTYAW-----YPSPVDWCVGEVRKLAAGGGHSAVLTD 169
E + Y + +G+ KLA GG H+ L D
Sbjct: 409 LGYENTQNIGDNELPYTAGAVKILGKATKLAVGGNHTCALLD 450
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 26 KELLPRRVVA---LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
+ P VA LDGI V G HTCAL + G++ WG GQLG T++
Sbjct: 363 PDQFPDNPVAEGPLDGI--NSVRNGTDHTCALLNDGSVRCWGYGVYGQLGY-ENTQNIG- 418
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+++ + + ++ +L A G +HT + G + WG N+YGQ
Sbjct: 419 ---DNELPYTAGAVKILGKATKL-AVGGNHTCALLDTGLVRCWGLNTYGQ 464
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH-TCALTSKGALYAWGGC 66
WG + GQLG+ + + P V LDG V+ H TCAL S G WG
Sbjct: 679 WGYNAYGQLGYGNTTA---RFTPGPAVDLDGATAYQVSASTGHSTCALLSTGKARCWGQG 735
Query: 67 QAGQLGLG 74
GQLG G
Sbjct: 736 NLGQLGYG 743
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y++G G G+LGH D +L P+++ L I + +A GG H+ ALT G +Y++
Sbjct: 197 DVYSFGFGLFGRLGH---GDTDSQLEPKKIEDLSDI--QAIAAGGNHSLALTKSGDVYSF 251
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G + P + + + +Q VA G +H+L + G+++
Sbjct: 252 GWGLHGQLGHGDTENQLT--PKKIEDL----------SDIQAVAAGANHSLALTKSGEVY 299
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G + GQ + + P ++ + +++ +AAG HS LT +
Sbjct: 300 SFGRGNTGQLGHGDTDDQLTPKKIE-GLKDIQAIAAGDFHSLALTKS 345
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 19/167 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y++G G+ G LGH + + + P+++ +L + + +A GG H+ ALT G +Y++
Sbjct: 148 DVYSFGNGTSG-LGHGNTED---QSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSF 201
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G ++D+ I + + +Q +A G +H+L + G ++
Sbjct: 202 GFGLFGRLGHG-----------DTDSQLEPKKIEDLSD-IQAIAAGGNHSLALTKSGDVY 249
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
+G+ +GQ + + P ++ + +++ +AAG HS LT +
Sbjct: 250 SFGWGLHGQLGHGDTENQLTPKKIE-DLSDIQAVAAGANHSLALTKS 295
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++++G+G G+LGH GD +L P+++ L I + +A G H+ ALT G +
Sbjct: 47 VSVFSFGMGMYGKLGH-----GDTANQLAPKKIEGLSDI--QAIAAGTNHSLALTKSGDV 99
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y++G G+LG G +D+ I + + +Q +A G H+L + G
Sbjct: 100 YSFGFGLFGRLGHG-----------NTDSQLEPKKIEGLSD-IQAIAAGDFHSLALTKSG 147
Query: 121 KIHGWGYNSYGQA---ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ +G + G ++ST P ++ + +V+ +AAGG HS LT +
Sbjct: 148 DVYSFGNGTSGLGHGNTEDQST----PKKIE-SLSDVQAIAAGGNHSLALTKS 195
>gi|427795769|gb|JAA63336.1| Putative e3 ubiquitin-protein ligase herc2, partial [Rhipicephalus
pulchellus]
Length = 561
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
D+Y WG + GQ+G S + + PR+V + + G VACG + A+ G ++
Sbjct: 178 DVYAWGQNNCGQVGSGSTTN---QPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFG 234
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + S N+ +V+ V CG++HT+ +G +
Sbjct: 235 WGYNGNGQLGLGNN------VNQTSPCRVTNLQGVVI----HKVVCGYAHTMALSDEGVL 284
Query: 123 HGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGH--SAVLTDACSLKELCE 178
+ WG NSYGQ N+ + + + P D +G + ++AA + SAV+T + +
Sbjct: 285 YTWGANSYGQLGTGNKANQVSPFKMPTD--IGRIVEIAASHYNHISAVMTQTSRVYMWGQ 342
Query: 179 FRLAESVTLSNASEIEDV 196
R +SVT+ + +
Sbjct: 343 CR-GQSVTVPTETPFHSI 359
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ VACG H+ ALT+ G +YAWG GQ+G G T P R + +
Sbjct: 160 VAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQ----PTP-----RKVSSGIGG 210
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAA 159
VACG + ++ M +G++ GWGYN GQ + P V G V K+
Sbjct: 211 RRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVC 270
Query: 160 GGGHSAVLTD 169
G H+ L+D
Sbjct: 271 GYAHTMALSD 280
>gi|357393793|ref|YP_004908634.1| hypothetical protein KSE_69190 [Kitasatospora setae KM-6054]
gi|311900270|dbj|BAJ32678.1| hypothetical protein KSE_69190 [Kitasatospora setae KM-6054]
Length = 430
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG GQLG S+ S + P +VV L +DVA GG H+ AL + AWG
Sbjct: 120 VQSWGANGSGQLGDGSVFSHNA---PGQVVNLS--SARDVAAGGWHSLALLDDQTVVAWG 174
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S S +P + N V +A G +H++ DG +
Sbjct: 175 RNNYGQLGNG--TNSDSSVPVRVEGL----------NKVIAIAAGLNHSIALREDGTVWA 222
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WGYN GQ + S P+PV G V K+AAG H+ L
Sbjct: 223 WGYNINGQLGDGTSASRNVPAPVGGLTG-VTKIAAGCNHNLAL 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF---IKDVACGGVHTCALT-SKGA 59
+ WG + GQLG D + R V GI+ + +A G H+ A+T S
Sbjct: 280 VKAWGYNATGQLG-------DNSTINRYTPVDTQGIWLGGVSQIAAGCNHSLAVTDSDNK 332
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
L AWG +GQ+G G + +P +P L G+QLVA G HT+V + D
Sbjct: 333 LKAWGQNTSGQVGDGTTDYRITPVP---------VPGL---KGIQLVAGGREHTIVLLGD 380
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG N GQ N +T + P + V K+AA
Sbjct: 381 NTVRSWGANGSGQLGNGTTTESSTPVTTLTALTGVDKIAA 420
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 36/181 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG+ + +P RV L+ + +A G H+ AL G ++AWG
Sbjct: 170 VVAWGRNNYGQLGNGT---NSDSSVPVRVEGLNKVIA--IAAGLNHSIALREDGTVWAWG 224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYM------ 117
GQLG + + RN+P V GV +A G +H L +
Sbjct: 225 YNINGQLG-------------DGTSASRNVPAPVGGLTGVTKIAAGCNHNLALVGPPSGG 271
Query: 118 ----RDGKIHGWGYNSYGQAANEKSTYAWYPSPVD----WCVGEVRKLAAGGGHSAVLTD 169
+ WGYN+ GQ + ST Y +PVD W +G V ++AAG HS +TD
Sbjct: 272 VKPTSGNAVKAWGYNATGQLG-DNSTINRY-TPVDTQGIW-LGGVSQIAAGCNHSLAVTD 328
Query: 170 A 170
+
Sbjct: 329 S 329
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 13/124 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG VGQLG + + +L P +V L+GI I+ VACG HT AL+ +GALY W
Sbjct: 202 EVFGWGYNGVGQLG---IGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVW 258
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKI 122
GG GQLGLG + + + I + + + + ++H V M + GKI
Sbjct: 259 GGNGFGQLGLGNKANACTPI---------KLNVTEMGRISDIATLHYNHISVAMGQGGKI 309
Query: 123 HGWG 126
+ WG
Sbjct: 310 YMWG 313
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG +LG+ S G L P + L+ + +ACG H+ ALT G +Y+W
Sbjct: 97 EIYSWGHNGYCELGNGSTNQG---LTPTLCLNLNEKVVTAIACGSHHSVALTEDGEVYSW 153
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQ+ G + + P R + + V +ACG + ++ G++
Sbjct: 154 GQNNCGQVSSGISSNQGA--P-------RKVNSALTGKVVVSIACGQTSSMAVTDVGEVF 204
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLTDACSL 173
GWGYN GQ P V G V K+A G H+ L+D +L
Sbjct: 205 GWGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGAL 255
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYA 62
++Y+WG + GQ+ S + PR+V AL G + +ACG + A+T G ++
Sbjct: 149 EVYSWGQNNCGQV---SSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFG 205
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLG+G S P V NG+ + VACG++HTL +
Sbjct: 206 WGYNGVGQLGIGNYVNQLS-------------PCKVTGLNGIVIEKVACGYAHTLALSDE 252
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N +GQ
Sbjct: 253 GALYVWGGNGFGQ 265
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
D+Y G + G LG +GD L P++V AL G IK A G G H ALT+KG +
Sbjct: 44 DVYALGSNTAGCLG-----TGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKGEI 98
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+WG +LG G + + T N+ V V +ACG H++ DG
Sbjct: 99 YSWGHNGYCELGNGSTNQGL------TPTLCLNLNEKV----VTAIACGSHHSVALTEDG 148
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTD 169
+++ WG N+ GQ ++ S+ P V+ + V +A G S +TD
Sbjct: 149 EVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTD 199
>gi|134095394|ref|YP_001100469.1| BLIP-II repeat-containing protein [Herminiimonas arsenicoxydans]
gi|133739297|emb|CAL62346.1| Conserved hypothetical protein, putative regulator of chromosome
condensation [Herminiimonas arsenicoxydans]
Length = 500
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WGL GQLG S S ++P V L G + + G HTCA+ + GAL WG
Sbjct: 171 WGLNDQGQLGDNSTTS---RMIPVDVAGL-GSGVSSINAGRAHTCAI-AAGALKCWGENI 225
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKIHGW 125
GQLG T+ RN P+ V + +GV V+ GHSH G + W
Sbjct: 226 YGQLGDNSATQ-------------RNAPVDVAGLGSGVASVSAGHSHNCAITTSGAVKCW 272
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLK 174
G+N+ GQ S W P V + +AAGG H+ T + ++K
Sbjct: 273 GWNAAGQLGIPPSVERWTPVDVVQLGNDGASIAAGGLHTCATTKSGAVK 321
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 37/207 (17%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSKGALYAWGG 65
WG + GQLG + + P VV L DG I A GG+HTCA T GA+ WG
Sbjct: 272 WGWNAAGQLG---IPPSVERWTPVDVVQLGNDGASI---AAGGLHTCATTKSGAVKCWGW 325
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGKIH 123
GQLG ++ T R+ P+ VV +GV +A G H M G
Sbjct: 326 NAHGQLG-------------DNSTTQRDTPMNVVGLESGVSSIAAGLHHNCAVMTTGAAK 372
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACS-------LKE 175
WG+N Y Q + +T +PVD V +AA H+ AV+T + +
Sbjct: 373 CWGWNEYSQLGDNSATQ--RNAPVDVAGSGVASIAADLYHTCAVMTTGAAKCWGRNDYGQ 430
Query: 176 LCEFRLAESVTLSN----ASEIEDVAS 198
L + L +S T N AS + +AS
Sbjct: 431 LGDNSLTDSPTPVNVSGLASGVSSIAS 457
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG + GQLG S D P VV L+ + +A G H CA+ + GA WG +
Sbjct: 323 WGWNAHGQLGDNSTTQRDT---PMNVVGLES-GVSSIAAGLHHNCAVMTTGAAKCWGWNE 378
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
QLG T+ RN P+ V +GV +A HT M G WG
Sbjct: 379 YSQLGDNSATQ-------------RNAPVDVAGSGVASIAADLYHTCAVMTTGAAKCWGR 425
Query: 128 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLT 168
N YGQ + T + P V V +A+G H+ AVLT
Sbjct: 426 NDYGQLGDNSLTDSPTPVNVSGLASGVSSIASGYSHTCAVLT 467
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 22 QSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80
Q GD R V + G + +A HTCA+ + GA WG GQLG T S
Sbjct: 381 QLGDNSATQRNAPVDVAGSGVASIAADLYHTCAVMTTGAAKCWGRNDYGQLGDNSLTDSP 440
Query: 81 SFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ + N+ L +GV +A G+SHT + G++ WG N YGQ + ST
Sbjct: 441 TPV---------NVSGLA--SGVSSIASGYSHTCAVLTTGQVKCWGRNDYGQVG-DGSTT 488
Query: 141 AWYPSPVD 148
+ +PVD
Sbjct: 489 VLHLTPVD 496
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ ++++A G HTCA+T G + WG GQLG ++ T R IP+ V
Sbjct: 147 LHVRNIAAGEQHTCAVTDAGGVKCWGLNDQGQLG-------------DNSTTSRMIPVDV 193
Query: 99 --VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK 156
+ +GV + G +HT + G + WG N YGQ + +T P V V
Sbjct: 194 AGLGSGVSSINAGRAHTCA-IAAGALKCWGENIYGQLGDNSATQRNAPVDVAGLGSGVAS 252
Query: 157 LAAGGGHSAVLTDACSLK 174
++AG H+ +T + ++K
Sbjct: 253 VSAGHSHNCAITTSGAVK 270
>gi|440290324|gb|ELP83750.1| guanine nucleotide exchange factor, putative [Entamoeba invadens
IP1]
Length = 965
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P R+ ++ F+ D G C L SKG LY WG GQLG+ P R F
Sbjct: 88 VPTRIEGIN--FVIDKVSMGSFFCMLLSKGRLYTWGSFSFGQLGI-PDARIF-------- 136
Query: 89 TYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
N P LV +G+Q V+CG HTL G+I WG + YGQ +S P+ +
Sbjct: 137 ----NKPELVPQLSGIQDVSCGSCHTLALNVWGEIFSWGQDDYGQLGRSRSQKNDIPTDI 192
Query: 148 DWCVGE-VRKLAAGGGHSAVLTD 169
++ V K+ G SA +TD
Sbjct: 193 EFFRNHVVTKIFTGAFCSACITD 215
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+YTWG S GQLG + +K EL+P+ L G I+DV+CG HT AL G +++W
Sbjct: 117 LYTWGSFSFGQLGIPDARIFNKPELVPQ----LSG--IQDVSCGSCHTLALNVWGEIFSW 170
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
G GQLG + + IP + + +FRN + + G AC
Sbjct: 171 GQDDYGQLGRSRSQK--NDIPTDIE-FFRNHVVTKIFTGAFCSAC 212
>gi|157871059|ref|XP_001684079.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127147|emb|CAJ04887.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1754
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG+G G+LGH + + E+ PR V L F+ D +C H+ LTS GA+Y +
Sbjct: 786 EVYTWGVGRNGRLGH---GTDNSEVKPRLVEGLRSSFVVDASCSNAHSAVLTSTGAVYVF 842
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKI 122
G GQLGL R +P +V +P V C HT + + DG +
Sbjct: 843 GENAEGQLGL-------------RGREPRRLPTMVPLPMKAVAVTCAREHTCILLADGDV 889
Query: 123 HGWG 126
G
Sbjct: 890 VACG 893
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+ VACG T LT GALY+ G GQLG+G + +S + + + + +L
Sbjct: 595 VAQVACGLAVTYVLTVDGALYSCGRADNGQLGIGEGSARYS---DAGVSKLQRV-LLKDN 650
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
V +A G + + D ++ WG+N YGQ
Sbjct: 651 ERVTRIAAGTACAMALTGDSALYCWGHNVYGQ 682
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 5 IYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+YTWG S GQLG CS+ S P+ V +L G+ + V+ GG H+ AL+ G++
Sbjct: 138 VYTWGQNSRGQLGLGKKGCSISS------PQCVRSLSGMPLVQVSAGGDHSFALSVSGSV 191
Query: 61 YAWGGCQAGQLGLG-PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG Q R P D+ N+ ++CG HT + +
Sbjct: 192 FGWGRNDCGQLGLGDSQDRC---TPTSVDSL--NL------KKTTSISCGKDHTAILTKH 240
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G + +G +GQ + S P V G +V ++A G H+ VL +
Sbjct: 241 GTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
LPR + A I + VACG HT ALT +G +Y WG GQLGLG + S S S
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSIS-----SP 161
Query: 89 TYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
R++ +G+ L V+ G H+ G + GWG N GQ S P+
Sbjct: 162 QCVRSL------SGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTS 215
Query: 147 VD-WCVGEVRKLAAGGGHSAVLT 168
VD + + ++ G H+A+LT
Sbjct: 216 VDSLNLKKTTSISCGKDHTAILT 238
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++T+G G GQLGH S EL PR V L G + +ACG HT L +Y
Sbjct: 240 HGTVFTFGSGQFGQLGH---NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIY 296
Query: 62 AWGGCQAGQLG 72
++G QLG
Sbjct: 297 SFGCNDQNQLG 307
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I+ V CG L+ KG++Y QA L L +F IP
Sbjct: 77 IEAVGCGDDEVILLSEKGSVYRVDVTQA--LYLPRMLEAFCRIP---------------- 118
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLA 158
V VACG HT+ ++G+++ WG NS GQ +K P V G + +++
Sbjct: 119 --VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVS 176
Query: 159 AGGGHSAVLT 168
AGG HS L+
Sbjct: 177 AGGDHSFALS 186
>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 478
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ T+G G GQ S + EL P V A+ G+ + +A G HT +T G +YA+G
Sbjct: 321 LLTFGWGLYGQ--QVGQGSTEDELSPCLVSAMRGLRVVGIAAGLWHTLCITDIGDVYAFG 378
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G Q GQLG+G T E+ + P+L V VACG H++V GKI
Sbjct: 379 GNQFGQLGVGGNTA-------ETSPRLVDAPLLEDETSVA-VACGARHSVVLTGSGKIFA 430
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 431 WGWNKYGQ 438
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD-----VACGGVHTCALTSKG 58
D+Y +G GQLG + E PR V D ++D VACG H+ LT G
Sbjct: 373 DVYAFGGNQFGQLG---VGGNTAETSPRLV---DAPLLEDETSVAVACGARHSVVLTGSG 426
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTL 114
++AWG + GQLGLG D+ R++P+ V N +ACG HTL
Sbjct: 427 KIFAWGWNKYGQLGLG-------------DSNNRDLPVQVTMNDGGRAASIACGWWHTL 472
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 58/138 (42%), Gaps = 30/138 (21%)
Query: 28 LLPRRVVALD-GIFIKDVACGGVHTCALTSKGA----------------LYAWGGCQAGQ 70
P +V LD GI I VA GG HT AL+ + +Y WG GQ
Sbjct: 205 FAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHVYGWGYGGEGQ 264
Query: 71 LGLGPQTR---------SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
LGLG +TR FS + N +IP + V +ACG H+ V G
Sbjct: 265 LGLGSRTRIVSTPQRVPCFSSLENGVTIGEASIP----GSCVTRIACGGRHSAVITDAGA 320
Query: 122 IHGWGYNSYGQAANEKST 139
+ +G+ YGQ + ST
Sbjct: 321 LLTFGWGLYGQQVGQGST 338
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-IFIKDVACGGVHTCALTSKGALYA 62
++YTWG + GQ+G S + PR+V A G I D+ CG + +T G +Y+
Sbjct: 171 EVYTWGYNNCGQIGSGSTANQGS---PRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYS 227
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRD 119
WG GQLG+G N+++ P V GV + V CG++H L +
Sbjct: 228 WGYNGNGQLGVGNNV-------NQTN------PCRVAALQGVVIAQVVCGYAHALALTDN 274
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
G + GWG NSYGQ + P V +G V LAA
Sbjct: 275 GVVFGWGANSYGQLGSGNKANTCTPLQVATRIGRVVCLAA 314
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYAW 63
+Y+ G + G LG + L PR + + G I ++ G G H LT G +Y+W
Sbjct: 67 VYSLGTNTSGCLG---VGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSW 123
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G QLG G + P S + RNI N V +ACG H++ +G++
Sbjct: 124 GHNSYMQLGNGGTS------PGTSPSLLSRNIS-----NKVVQIACGSHHSMALTTEGEV 172
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
+ WGYN+ GQ + + P V C+G R + G + L
Sbjct: 173 YTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSL 217
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG + GQLG S + G PR + I+D+ACG HT + G +Y+ G
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSF--SVVIEDIACGEEHTSFIAQNGYVYSMG 93
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP----NGVQLVACGHSHTLVYMRDG 120
GQLG+ + ++Y+++ P LV VQ ++CG HT +G
Sbjct: 94 NNNQGQLGV-----------SVDESYYKSAPTLVEGLKGYKAVQ-ISCGAYHTATVCDNG 141
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVD 148
++ WG N GQ KS P VD
Sbjct: 142 QLFTWGQNCEGQLGIGKSDNMTTPQIVD 169
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G + GQLG S+ + P V L G ++CG HT + G L+ WG
Sbjct: 89 VYSMGNNNQGQLG-VSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWG 147
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G +SD + + N V+CG +T+V + KI G
Sbjct: 148 QNCEGQLGIG-----------KSDNMTTPQIVDLKNNLAVFVSCGKRNTMVITQTQKIFG 196
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+G GQ + P + + + ++ G H+ L +
Sbjct: 197 FGDGKCGQLGLGNECNEYKPRQLQIQMQNIVAISCGDRHTLFLNE 241
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + D P+ +V L V+CG +T +T ++ +G
Sbjct: 143 LFTWGQNCEGQLG---IGKSDNMTTPQ-IVDLKNNLAVFVSCGKRNTMVITQTQKIFGFG 198
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG + + P + +NI ++CG HTL +G+
Sbjct: 199 DGKCGQLGLGNECNEYK--PRQLQIQMQNIVA---------ISCGDRHTLFLNEEGEAFS 247
Query: 125 WGYNSYGQ---AANEKST 139
G N+Y Q A N +S+
Sbjct: 248 CGNNTYNQLGCANNSQSS 265
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHTCALTSKGALYAW 63
I+ +G G GQLG L + E PR++ + + I ++CG HT L +G ++
Sbjct: 194 IFGFGDGKCGQLG---LGNECNEYKPRQLQIQMQNIVA--ISCGDRHTLFLNEEGEAFSC 248
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG----VQLVACGHSHTLVYMRD 119
G QLG ++S NIP+ V V+++A + +
Sbjct: 249 GNNTYNQLGCANNSQS------------SNIPVKVKQKSTLKFVKVIAANTPMSAALSSE 296
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG +GQ
Sbjct: 297 GYLYLWGTGFFGQ 309
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG GQLG + D P + ALD ++ +ACGG HT LT G ++ +
Sbjct: 225 NVYSWGRNDCGQLGLGHTYNKDS---PSCIEALDDQKVEFLACGGSHTALLTKSGLVFTF 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V N V +ACG HTL Y+ D
Sbjct: 282 GDGKYGQLG-----------HNSTQNELR--PCLVAGLVGNRVTQIACGRQHTLAYVSDM 328
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPV 147
GK+ +G GQ N + P P+
Sbjct: 329 GKVFSFGSGKEGQLGNGGTCNQLMPRPM 356
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + + P V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 172 ELFAWGQNLDGQLGVGRIFASTST--PEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 229
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDG 120
G GQLGLG TY ++ P + V+ +ACG SHT + + G
Sbjct: 230 GRNDCGQLGLG-------------HTYNKDSPSCIEALDDQKVEFLACGGSHTALLTKSG 276
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G YGQ + + P V VG V ++A G H+
Sbjct: 277 LVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHT 321
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G F + N+
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGR-----IFASTSTPEIVENL------ 202
Query: 101 NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKL 157
+GV LV + G +H++ G ++ WG N GQ + PS ++ + V L
Sbjct: 203 SGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFL 262
Query: 158 AAGGGHSAVLTDA 170
A GG H+A+LT +
Sbjct: 263 ACGGSHTALLTKS 275
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 106 VFWWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 162
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T P + + +L+ +Q VACG + TL +G +
Sbjct: 163 LGEYGRLGHGDNTTQLK--P-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 212
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 213 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 261
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 157 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G +E +NI L GV + CG +L +
Sbjct: 212 VFSWGDGDFGKLGRG---------GSEGCNIPQNIERL-NGQGVCQIECGAQFSLALTKS 261
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG Y + + + P V+ G ++ +A G H +TD+
Sbjct: 262 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 313
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + + +P+ + L+G + + CG + ALT G ++ WG
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 268
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G SD + R ++ G ++ VA G H L G++
Sbjct: 269 KGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 316
Query: 123 HGWGYNSYGQ 132
+ WG N +GQ
Sbjct: 317 YAWGDNDHGQ 326
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 11/168 (6%)
Query: 7 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WGL QLG G K +P L + + VA G A+T +G +YA G
Sbjct: 1 VWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 57
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
G+LGLG + + IP + + V V G H DGK+ WG
Sbjct: 58 TNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDGKVFWWG 110
Query: 127 YNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
G+ + P ++ +R +A G HSA LT + L
Sbjct: 111 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 158
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G +LGH S K P+ V L G I VA G +H A+T G +YAWG
Sbjct: 264 VWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 320
Query: 65 GCQAGQLG 72
GQ G
Sbjct: 321 DNDHGQQG 328
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+GLG GQLG + + +P+ + + I +ACG HT +T G +Y +G
Sbjct: 263 VYTFGLGQFGQLGLGTFLF--ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ G+LGLG + + FIP + R I VQLV+CG HTLV+
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHTLVF 364
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 25/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG S + K P V AL +K ACG HT T G +YA G
Sbjct: 56 LYMFGSNNWGQLGLGSKSTVSK---PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E + F I ++ ++ G + + DG++
Sbjct: 113 GNNEGQLGLG---------DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFM 163
Query: 125 WGYNSYGQAANEKSTYAWYPS------PVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ E T P P+ W ++ G HSA +T
Sbjct: 164 WGDNSEGQIGLENVTNVCVPQQVTVGKPISW-------ISCGYYHSAFVT 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQ+G L++ +P++V G I ++CG H+ +T++G LY +
Sbjct: 160 ELFMWGDNSEGQIG---LENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTF 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LGL Q +P P+ +P V VACG HT+V + + ++
Sbjct: 215 GEPECGKLGLPNQLLVNHRMPQ---------PVPGIPGKVVQVACGGGHTVV-LTEKAVY 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLTD 169
+G +GQ T+ + + V + ++ +A G H+A++TD
Sbjct: 265 TFGLGQFGQLG--LGTFL-FETSVPKAIEHIKDQKISFIACGENHTALITD 312
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T LY +G GQLGLG ++ T + + P V
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTV------SKPTCVKALK----PEKV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTY---AWYPSPVDWCVGEVRK 156
+ ACG +HTLV GK++ G N+ GQ E+ST+ +++ S ++++
Sbjct: 90 KFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQ-----RKIKQ 144
Query: 157 LAAGGGHSAVLTD 169
L+AG SA LT+
Sbjct: 145 LSAGSNTSAALTE 157
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG + Q +P+ V + G ++ VACGG HT LT K A+Y +G
Sbjct: 211 LYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AVYTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG +F F +T + + +ACG +HT + G ++
Sbjct: 268 LGQFGQLGLG----TFLF-----ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL-------TDACSLK 174
+G +G+ E ST + P+ ++ V+ ++ GG H+ V T+ LK
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPRLGGTEEMELK 378
Query: 175 EL 176
E+
Sbjct: 379 EI 380
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G+ GQLG+ S S +L I I V CG H+ AL+S G +Y+W
Sbjct: 984 ELYLWGKGNSGQLGNSSFNSSKVPILAN---IPQTIPIVQVVCGWQHSMALSSSGQVYSW 1040
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMR 118
G + GQLG +D N P ++ ++ ++CGHSH+
Sbjct: 1041 GLGEEGQLG-------------HNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISE 1087
Query: 119 DGKIHGWGYN 128
+G ++ WG N
Sbjct: 1088 EGDLYTWGCN 1097
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 47/196 (23%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG------- 58
+ WG G G+LG L + E P + + I++ +CG HT +T KG
Sbjct: 915 FAWGSGKDGRLG---LGTDRGESNPTMLNSQQFIYL---SCGYYHTAGITEKGIYNQYYL 968
Query: 59 ---------------ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG 102
LY WG +GQLG SF N S +PIL +P
Sbjct: 969 QTDKVKNILYFIQTGELYLWGKGNSGQLG----NSSF----NSS-----KVPILANIPQT 1015
Query: 103 VQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC---VGEVRKL 157
+ + V CG H++ G+++ WG GQ + P +++ +++ +
Sbjct: 1016 IPIVQVVCGWQHSMALSSSGQVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYI 1075
Query: 158 AAGGGHSAVLTDACSL 173
+ G HSA +++ L
Sbjct: 1076 SCGHSHSAAISEEGDL 1091
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 43 DVACGGVHTCALTSKGALYAWGG-CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
D+ACG T L ++G +Y +G G +G + ++ +S I
Sbjct: 1215 DIACGYEFTIVLNAEGTVYQFGKKISQGPDFIGTKQEIQDYVTKDSQNVTPQIMYEFGNI 1274
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSY 130
VQ +A G +H + +G+++ WG N Y
Sbjct: 1275 RVQQIAAGKNHIAIITENGELYTWGKNFY 1303
>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 567
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 38/210 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA---- 59
++ WG+ GQLG+ S E P +V+ L+ + + D+ GG H+ ALT++G
Sbjct: 258 EVLAWGINDFGQLGNGSTF---YETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQ 314
Query: 60 ---------LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH 110
++ WG + G+LGLG RS S + F+ P+ +CG
Sbjct: 315 IECAKAGKMVFVWGRGEYGRLGLG--DRSGSSKLRATGVAFKE------PD----ASCGG 362
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKL-----AAGGGHS 164
+HT+V +G+I+ WG S+G+ T Y SPV+ + G + A+GG HS
Sbjct: 363 THTMVLTSEGRIYTWGRGSFGRLGT--GTEKDYLSPVEVFLPGGPERWRVICCASGGRHS 420
Query: 165 AVLT--DACSLKELCEFRLAESVTLSNASE 192
VL D R+A L +SE
Sbjct: 421 LVLALPDNSDSDRTARMRIAAGPALGGSSE 450
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 80/201 (39%), Gaps = 41/201 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG LGH + E PRRV AL G+ I V+ GG H AL S G +YAWG
Sbjct: 110 VLSWGWNDRATLGHSHRE---HERKPRRVAALRGMEITQVSTGGWHCLALDSAGLVYAWG 166
Query: 65 GCQAGQLGLGPQTRSFS----------------------FIPNESDTYFRNIP------- 95
G + GQ + R + + + + P
Sbjct: 167 GNEYGQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEVWTWGEPWGDFSMK 226
Query: 96 ILVVPNGVQ------LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW 149
+ P V+ +ACG H L G++ WG N +GQ N + Y P+ V
Sbjct: 227 VDRHPKKVEGAIDIVKLACGAFHNLALNAAGEVLAWGINDFGQLGNGSTFYETSPTKV-L 285
Query: 150 CVGEVR--KLAAGGGHSAVLT 168
+ +VR + AGG HS LT
Sbjct: 286 GLEDVRVADIVAGGWHSLALT 306
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 30/177 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI------FIKD-VACGGVHTCALTSK 57
++ WG+ GQL +L + + P+ + AL G F+K + CG T A+ +
Sbjct: 51 VFGWGVNEDGQL---ALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAIDAD 107
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLV 115
G + +WG LG + E + R + L G+++ V+ G H L
Sbjct: 108 GQVLSWGWNDRATLGHSHR---------EHERKPRRVAAL---RGMEITQVSTGGWHCLA 155
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVG--EVRKLAAGGGHSAVLTD 169
G ++ WG N YGQ E + P+P CV V+++AAGG HS VLTD
Sbjct: 156 LDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTP---CVPGLRVKQVAAGGMHSCVLTD 209
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WG QL +S + P+R+ DG+ IK + G H A+T ++Y
Sbjct: 365 LYIWGCNKWSQLAQP--KSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYT 422
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRN------------IP--ILVVPNGVQLVAC 108
WG GQLG P +S IPN S N +P I ++ N Q+V C
Sbjct: 423 WGRNDYGQLGR-PAAKS---IPNGSAESESNATPTTTTPDCCHVPTEISILKNAKQIV-C 477
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGH 163
G H+L +D K+ WG+N +G A+ T + P V G+V K+ G GH
Sbjct: 478 GAEHSLAITKDDKLLAWGWNEHGMCADGTKTNVFLPKQVQGLDGQVASKVGVGAGH 533
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG L LLP + +K + GG HT LT G L+ G
Sbjct: 154 WGANSYGQLG---LGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGSNN 209
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGY 127
GQLGLG + + +P L ++ +ACG +HT+ + ++ WG
Sbjct: 210 KGQLGLGHTSDINKLV---------RVPDL---RPLKKIACGWNHTVAITENDELLCWGS 257
Query: 128 NSYGQAANEKS 138
N++GQ +++S
Sbjct: 258 NTHGQLTHKES 268
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGV-HTCALTSKGAL 60
++ WG + GQL H + + R + L G+ A GG+ HT A+++ G L
Sbjct: 251 ELLCWGSNTHGQLTH-----KESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTDGQL 305
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL----VACGHSHTLVY 116
+ WG + GQLG T S +P++ + + + I V + V + VA G H+
Sbjct: 306 WTWGAGKKGQLGW---TDSKMRVPHQ---WNKPVHIPVKEDDVDVKFVQVAAGAYHSAAL 359
Query: 117 MRDGKIHGWGYNSYGQAANEKST 139
G ++ WG N + Q A KS+
Sbjct: 360 SDMGILYIWGCNKWSQLAQPKSS 382
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+GLG GQLG + + +P+ + + I +ACG HT +T G +Y +G
Sbjct: 263 VYTFGLGQFGQLGLGTFLF--ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ G+LGLG + + FIP + R I VQLV+CG HTLV+
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHTLVF 364
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 25/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG S + K P V AL +K ACG HT T G +YA G
Sbjct: 56 LYMFGSNNWGQLGLGSKSTVSK---PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E + F I ++ ++ G + + DG++
Sbjct: 113 GNNEGQLGLG---------DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFM 163
Query: 125 WGYNSYGQAANEKSTYAWYP------SPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ E T P P+ W ++ G HSA +T
Sbjct: 164 WGDNSEGQIGLENVTNVCVPQQVTVGKPISW-------ISCGYYHSAFVT 206
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQ+G L++ +P++V G I ++CG H+ +T++G LY +
Sbjct: 160 ELFMWGDNSEGQIG---LENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTF 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LGL Q +P P+ +P V VACG HT+V + + ++
Sbjct: 215 GEPECGKLGLPNQLLVNHRMPQ---------PVPGIPGKVVQVACGGGHTVV-LTEKAVY 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLTD 169
+G +GQ T+ + S V + ++ +A G H+A++TD
Sbjct: 265 TFGLGQFGQLG--LGTFLFETS-VPKAIEHIKDQKISFIACGENHTALITD 312
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 22/133 (16%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T LY +G GQLGLG ++S + P V
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG----------SKSTVSKPTCVKALKPEKV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQA----ANEKSTY---AWYPSPVDWCVGEVRK 156
+ ACG +HTLV GK++ G N+ GQ E+ST+ +++ S ++++
Sbjct: 90 KFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTS-----QRKIKQ 144
Query: 157 LAAGGGHSAVLTD 169
L+AG SA LT+
Sbjct: 145 LSAGSNTSAALTE 157
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG + Q +P+ V + G ++ VACGG HT LT K A+Y +G
Sbjct: 211 LYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AVYTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG +F F +T + + +ACG +HT + G ++
Sbjct: 268 LGQFGQLGLG----TFLF-----ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 125 WGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVL-------TDACSLK 174
+G +G+ E ST + P+ ++ V+ ++ GG H+ V T+ LK
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPRLGGTEEMELK 378
Query: 175 EL 176
E+
Sbjct: 379 EI 380
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG S GQLG + D+ P V G I +A H+ ALT GA+ AWG
Sbjct: 217 WGSNSRGQLGDGTTT--DRST-PVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNS 273
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGKIHG 124
GQLG + T R+ P+ V +P G + +A G SHTLV G +
Sbjct: 274 NGQLG-------------DGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLA 320
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
WG NS GQ + +T P V G + LAAG HS LTD
Sbjct: 321 WGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + P V G I +A G HT LTS GA+ AWG
Sbjct: 266 VLAWGSNSNGQLGDGTTT---NRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWG 322
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
GQLG + T R+ P+ V +P G + +A G+ H+L G
Sbjct: 323 SNSNGQLG-------------DGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGA 369
Query: 122 IHGWGYNSYGQAANEKST 139
+ WG NSYGQ + +T
Sbjct: 370 VLAWGGNSYGQLGDGTTT 387
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG + + P V G I +A GG H+ ALT G + AWG
Sbjct: 59 VLAWGDNFSGQLGDGTTTA---RSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWG 115
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
GQLG + T R+ P+ V +P G + +A G H+L G
Sbjct: 116 SNSRGQLG-------------DGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGA 162
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
+ WG NS GQ + +T P V G A +S LTD
Sbjct: 163 VLAWGSNSNGQLGDGTTTARSTPVTVGLPAGTTITALAASTYSLALTD 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + + P V G I +A ++ ALT GA AWG
Sbjct: 163 VLAWGSNSNGQLGDGTTTA---RSTPVTVGLPAGTTITALAAS-TYSLALTDTGAALAWG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHS--HTLVYMRDGK 121
GQLG + T R+ P+ V +P G + A S H+L G
Sbjct: 219 SNSRGQLG-------------DGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGA 265
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
+ WG NS GQ + +T P V G + LAAG H+ VLT A
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSA 315
>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
Length = 627
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G G+LGH ++ + + P+ + L G +K + G H+ A+T G LY W
Sbjct: 465 LFSWGDGDYGKLGHGNIST---QKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTW 521
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKI 122
G G+LG G D RN+P LV + V VACG SHT+ +DG+
Sbjct: 522 GEGDFGRLGHG-------------DNSGRNVPTLVKDISNVGQVACGSSHTIAVSQDGRT 568
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKEL 176
W + G+ E + + P VD G +RK+A G S LT + + L
Sbjct: 569 V-WTFGG-GKLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLALTSSGQVAPL 621
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y WG S QL + +K L P+ V + + + G T + + GA+ A G
Sbjct: 360 VYAWGSNSSHQLAE---GTSEKILQPKLVTNFPKV--QQLEAGQYCTFVIDNDGAVSACG 414
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS------HTLVYMR 118
G+LGLG D+ + P + + LV S HTL
Sbjct: 415 KGSYGRLGLG-------------DSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTV 461
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRK-LAAGGGHSAVLTD 169
+G + WG YG+ + + YP + G+V K + AG HSA +T+
Sbjct: 462 EGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTE 514
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ + + CG HT ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGK 121
G GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 306
Query: 122 IHGWG 126
++ WG
Sbjct: 307 VYMWG 311
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 24/172 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGD------KELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+Y WG QLG+ + G LL ++VV +VACG H+ AL + G
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVV--------EVACGSHHSMALAADG 147
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
L+AWG GQ+G G P R + + V +ACG + ++ +
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQ----PTP-----RKVTNCLHTKKVVNIACGQTSSMAVLD 198
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G+++GWGYN GQ + P V G V ++ G H+ LTD
Sbjct: 199 SGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD 250
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + L+P+++ AL G IK ++ G G H T G +
Sbjct: 42 EVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVV 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YAWG QLG G + + I ++ L+V V+ VACG H++ DG
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLVKQVVE-VACGSHHSMALAADG 147
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDA 170
++ WGYN+ GQ + + P V C+ +V +A G S + D+
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS 199
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V L + ++ACG + A+ G +Y
Sbjct: 148 ELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGV--QLVACGHSHTLVYMRD 119
WG GQLGLG + P+ V +GV + CG++HTL +
Sbjct: 205 WGYNGNGQLGLGNNGNQLT-------------PVRVAALHGVCVNQIVCGYAHTLALTDE 251
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N+YGQ
Sbjct: 252 GLLYAWGANTYGQ 264
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+Y WG + GQLG S + L P +++ I+ AC HT A ++G +Y W
Sbjct: 254 LYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 310
Query: 64 GGCQAGQLGLGPQTRSFS 81
G C+ GQ + P FS
Sbjct: 311 GQCR-GQSVILPHLTHFS 327
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 8 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
WG G LG + D +L P RV G I DVA G VH+ ALTS G + AWG
Sbjct: 68 WGRDGYGALG-VGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNY 126
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGKIHG 124
G LG G +T + + ++D+Y +P V +P G V VA +++L G +
Sbjct: 127 YGVLGNGTKTDNSA----QNDSY---VPAAVHLPAGTTVTSVAASSTYSLALTATGTVLA 179
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N GQ N +T ++ P P+
Sbjct: 180 WGNNDQGQLGNGTNTDSYLPVPL 202
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 24 GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFI 83
G +LP +V GI I VA G H+ ALTS G ++ WG G LG G +F+
Sbjct: 285 GQDTVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNG----TFA-- 338
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW- 142
N S ++P + +A G++ +L GK+ WG N+YGQ N T +W
Sbjct: 339 -NSSVPVPASVPTDTT---ITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRTGSWP 394
Query: 143 -----YPSPVDWCVGEVRKLAAGG 161
P PV AGG
Sbjct: 395 GMGVSVPVPVSLAADTKITTMAGG 418
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 77/204 (37%), Gaps = 42/204 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG+ + LP + I +A H ALTS G + AWG
Sbjct: 177 VLAWGNNDQGQLGN---GTNTDSYLPVPLALPAATTITAIAAATNHGLALTSNGTVLAWG 233
Query: 65 GCQAGQLGLGPQTRSFSFI----PNES--------------------------DTYFRNI 94
+GQLG G T S + + P + DT I
Sbjct: 234 SNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLP-I 292
Query: 95 PILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV- 151
PI V P G+ + VA G+ H+L GK+ WG N +G N T+A PV V
Sbjct: 293 PI-VFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLGN--GTFANSSVPVPASVP 349
Query: 152 --GEVRKLAAGGGHSAVLTDACSL 173
+ +A G S LT L
Sbjct: 350 TDTTITAIAGGNAQSLALTSTGKL 373
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G LG+ + + +P I +A G + ALTS G L AWG
Sbjct: 321 VFTWGANYFGSLGNGTFANSS---VPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWG 377
Query: 65 GCQAGQLGLGPQTRSF 80
GQ+G G +T S+
Sbjct: 378 RNNYGQVGNGTRTGSW 393
>gi|340939343|gb|EGS19965.1| putative regulator of chromosome condensation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 623
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 5 IYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+Y WGL + +LG Q G + P+ + AL G I D+A G H+ A T G L
Sbjct: 443 VYGWGLNNYAELGIEDGVGQEGSYLMRPQLIEALAGYKIVDIAGGEHHSLACTEDGKLLT 502
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYF--RNIPIL-----VVPN--GVQLVACGHSHT 113
WG Q+G + SFS E +T + R P + VVPN GV VA G H+
Sbjct: 503 WGRIDGHQVGQ--PSESFS----EDNTVWDERQKPRILIFPTVVPNIEGVVKVAAGTDHS 556
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--AAGGGHSAVL 167
+DGK++ WG+++ Q + P+ +D RK+ A GG +L
Sbjct: 557 FAVTKDGKVYSWGFSANYQTGQGTTDDIEAPTLIDNSAIRDRKIIFAGAGGQYGIL 612
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
IK +A G H A+ K +YAWG Q QL R +E T + I +P
Sbjct: 366 IKKLAAGLNHILAMDEKNKIYAWGAGQQAQLARRLLER------DEGSTGLQPTGIGSLP 419
Query: 101 NGVQ--LVACGHSHTLVYMRDGKIHGWGYNSYGQ-----AANEKSTYAWYPSPVDWCVG- 152
+ + ++ACG H+ V +++GWG N+Y + ++ +Y P ++ G
Sbjct: 420 HRAKPDMIACGSYHSFVIDTKKRVYGWGLNNYAELGIEDGVGQEGSYLMRPQLIEALAGY 479
Query: 153 EVRKLAAGGGHSAVLTDACSL 173
++ +A G HS T+ L
Sbjct: 480 KIVDIAGGEHHSLACTEDGKL 500
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKG 58
+D++ +G G+ G+LG S++ K+ + PR L + +ACGG+H ALT
Sbjct: 194 MDVFVFGEGTAGELGLGSVRYDGKKPIDVKRPRINHNLKNVV--QIACGGMHVAALTKDN 251
Query: 59 ALYAWGGCQAGQLG-----------------LGPQTRSFSFIPNESDTYFRNIPILVVPN 101
+ WG G LG P ES I +P
Sbjct: 252 KILTWGVNDQGALGRDTTWDGGLRDINEEDSDDDDNDDTGMNPKESTPG--EIDTTDIPE 309
Query: 102 G---VQLVACGHSHTLVYMRDGKIHGWG--YNSYGQAANEKSTYAWYPSPVDWCVGEVRK 156
G VQ+VA S T G ++GWG ++ G K+ + + +++K
Sbjct: 310 GTRWVQVVAS-DSATFALTDTGLVYGWGTFRSNEGILGFSKNVLVQRTPTLVPGLSKIKK 368
Query: 157 LAAGGGH 163
LAAG H
Sbjct: 369 LAAGLNH 375
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P R+VAL G+ ++ V G H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 258 GANTYGQLGTGNKSNQLS--PVQIMTEKERI--------VEIAACHSTHTSAAKTQSGQV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG QLG+ + G +L L + +VACG H+ ALT G +YAW
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVS--ATLLNRKVTEVACGSHHSMALTDSGEVYAW 152
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRN-IPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQ+G G + P + +N + + +V CG + +L + +G++
Sbjct: 153 GYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIV--------CGQTSSLAVVDNGEV 202
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
+GWGYN GQ + P + G V+++ +G HS LTD
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTD 250
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + PRRV + L + CG + A+ G +Y
Sbjct: 148 EVYAWGYNNCGQVGSGSTAN---QPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDG 120
WG GQLGLG + P LV G VQ V G++H+L +G
Sbjct: 205 WGYNGNGQLGLGNNGNQLT--PCR----------LVALQGLCVQQVVSGYAHSLALTDEG 252
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
++ WG N+YGQ + SPV + R + HS
Sbjct: 253 LLYAWGANTYGQLGTGNKSNQL--SPVQIMTEKERIVEIAACHST 295
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
++Y +GL LG +GD + ++P++V L G + ++ G G H T G L
Sbjct: 42 EVYAFGLNCSNCLG-----TGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLATEDGEL 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVY 116
+AWG QLG G + + P+LV + V VACG H++
Sbjct: 97 FAWGHNGYSQLGNGTTNQGVA-------------PVLVSATLLNRKVTEVACGSHHSMAL 143
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 144 TDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCL 178
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 254 LYAWGANTYGQLG-----TGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVY 308
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 309 MWGQCR-GQSIILPYLTHF 326
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+TS +YA+G + LG G + +P + D IL V L H
Sbjct: 37 ITSDDEVYAFGLNCSNCLGTGDS--QCTIVPKKVD-------ILSGRKVVSLSYGSGPHI 87
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDA 170
L+ DG++ WG+N Y Q N + P V + +V ++A G HS LTD+
Sbjct: 88 LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDS 146
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG G +LGH L E+ P+++ L +++ DVA G +H+ +T++G +YAW
Sbjct: 424 ELYTWGNGDYYRLGHGMLLD---EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAW 480
Query: 64 GGCQAGQLGLGPQTRSFSFIPNE---SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
G + LG+ Q +P FR+ VA G SH+L +G
Sbjct: 481 GSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFY-------QVAAGTSHSLSLSENG 533
Query: 121 KIHGWGYN 128
++ WG N
Sbjct: 534 HLYVWGSN 541
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+GS G LG+ + +L + + G+F ++A G H+ AL +Y WG
Sbjct: 320 VFIWGMGSQGCLGNGRVD----DLETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWG 375
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + +P + T+F I Q + CG H+ + +++
Sbjct: 376 VNNRGQLGIG--NKENQLLPKQL-TFFDRKKI-----QCQYLYCGDQHSACITTNKELYT 427
Query: 125 WGYNSY 130
WG Y
Sbjct: 428 WGNGDY 433
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 34 VALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN 93
+AL F+K + CG HT ALT +GA++ WG G LG G
Sbjct: 295 IALKQEFVK-IVCGHHHTMALTEEGAVFIWGMGSQGCLGNG------------------R 335
Query: 94 IPILVVPNGVQL-------VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+ L P + + +A G H+L ++ +++GWG N+ GQ
Sbjct: 336 VDDLETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQ 381
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
+Y WG+ + GQLG + + + +LLP+++ D I + + CG H+ +T+ LY
Sbjct: 371 VYGWGVNNRGQLG---IGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYT 427
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG +LG G + +E + + I IL V VA G H+L +G +
Sbjct: 428 WGNGDYYRLGHG-------MLLDEMEP--KKIEIL-QDVYVLDVALGTIHSLCITNEGFV 477
Query: 123 HGWG 126
+ WG
Sbjct: 478 YAWG 481
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 25 DKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIP 84
++ P +V I+ ++C H A+T+KG Y WG Q QLGLG Q
Sbjct: 674 EQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQ-------- 725
Query: 85 NESDTYFRNIPILV---VPNGVQLVA-CGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
SD F PIL+ + V ++A G + + G++ +G + +G +E +
Sbjct: 726 --SDHVF--TPILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNF 781
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF----IKDVACGGVHTCALTSKGAL 60
+Y WG LG + Q D + LP+RV + F VA G H+ +L+ G L
Sbjct: 477 VYAWGSSKDSVLGMPTQQYKD-QTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHL 535
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNE 86
Y WG + LG+ Q + + +P +
Sbjct: 536 YVWGSNKNSLLGVRLQGQEHTCVPQK 561
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 84 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWY 143
PN SD PI + V++V CGH HT+ +G + WG S G N +
Sbjct: 286 PNNSDFI---QPIALKQEFVKIV-CGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLET 341
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVL 167
P+ +D ++AAG HS L
Sbjct: 342 PTQIDISGLFFNEIAAGAYHSLAL 365
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
IK VACG H L +G Y WG G+LGL
Sbjct: 999 IKFVACGPNHALILNDQGQTYTWGATMGGRLGL 1031
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ + + CG HT ALT +G LYAW
Sbjct: 233 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 289
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGK 121
G GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 290 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 338
Query: 122 IHGWG 126
++ WG
Sbjct: 339 VYMWG 343
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V L + ++ACG + A+ G +Y
Sbjct: 180 ELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 236
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD 119
WG GQLGLG + P+ V V + CG++HTL +
Sbjct: 237 WGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCGYAHTLALTDE 283
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N+YGQ
Sbjct: 284 GLLYAWGANTYGQ 296
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 27/176 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + L+P+++ AL G IK ++ G G H T G +
Sbjct: 74 EVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVV 128
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
YAWG QLG G + + P+ V N V VACG H++
Sbjct: 129 YAWGHNGYSQLGNGTTNQGIA-------------PVQVCTNLLIKQVIEVACGSHHSMAL 175
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDA 170
DG++ WGYN+ GQ + + P V C+ V +A G S + D+
Sbjct: 176 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDS 231
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+Y WG + GQLG S + L P +++ I+ AC HT A ++G +Y W
Sbjct: 286 LYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 342
Query: 64 GGCQAGQLGLGPQTRSF 80
G C+ GQ + P F
Sbjct: 343 GQCR-GQSVILPHLTHF 358
>gi|320163592|gb|EFW40491.1| hypothetical protein CAOG_01016 [Capsaspora owczarzaki ATCC 30864]
Length = 2245
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G GQLGH Q+ D + P R+ +L I +A GG H+ AL++ G +YAW
Sbjct: 314 EVYSWGEGEAGQLGHS--QTTDLAV-PTRIESLQNCGILRLAAGGAHSIALSNTGEVYAW 370
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 115
G GQLGL P +S SF +P+L + + +A G HTLV
Sbjct: 371 GNGSHGQLGL-PDNKSVSF----------PMPVLALRGKNIFSIAAGSVHTLV 412
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGAL---- 60
++WG GS QLGH + + PR++ GI + +ACG HT A+ +G L
Sbjct: 239 FSWGTGS--QLGHGADAIARCDT-PRQIEKFVGIQVVAIACGHRHTLAIGKPQGPLRIAN 295
Query: 61 --------------------YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
Y+WG +AGQLG QT + +P ++ +N
Sbjct: 296 YSFVDEQSTPRAMYHRVTEVYSWGEGEAGQLGHS-QTTDLA-VPTRIES-LQNC------ 346
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 159
G+ +A G +H++ G+++ WG S+GQ + +P PV G+ + +AA
Sbjct: 347 -GILRLAAGGAHSIALSNTGEVYAWGNGSHGQLGLPDNKSVSFPMPVLALRGKNIFSIAA 405
Query: 160 GGGHSAVLTDACSLKE 175
G H+ V + S E
Sbjct: 406 GSVHTLVAGERTSSNE 421
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLG-------PQTRSFSFIPNESDTYFRN 93
+K VA GG H+ +T G L+ G + GQLGLG P F +E D
Sbjct: 51 VKSVAVGGEHSAFVTLDGTLFTMGSNKHGQLGLGDTLTRTEPTLVRFD---DEQDAAAAG 107
Query: 94 IPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
P+++V VACG HT+ G+++ WG GQ
Sbjct: 108 APVVIV-----AVACGRDHTVALSSSGRVYAWGDAQDGQ 141
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 68/176 (38%), Gaps = 51/176 (28%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPR------RVVALDGIFIKDVACGGVHTCALTSKG 58
++T G GQLG + + L R A + I VACG HT AL+S G
Sbjct: 70 LFTMGSNKHGQLGLGDTLTRTEPTLVRFDDEQDAAAAGAPVVIVAVACGRDHTVALSSSG 129
Query: 59 ALYAWGGCQAGQLGLG---------------PQTRSF----------------------- 80
+YAWG Q GQLGL P+ F
Sbjct: 130 RVYAWGDAQDGQLGLPAADVASNGSRRMQLRPRRVRFHACSADNSLNAQDPFAGSAGGDP 189
Query: 81 SFIPNESDTYF---RNIPILVVPNGVQLV----ACGHSHTLVYMRDGKIHGWGYNS 129
SF+ +E D RN PI V + +V ACG+SHT+ DG+ WG S
Sbjct: 190 SFLDSEHDQQQMDERNRPIGQVGAEMDVVITRIACGNSHTVAVSDDGRCFSWGTGS 245
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG+ SLQ + +P R L I V G +H+ A+ S G ++ WG
Sbjct: 69 VWAWGDNAYGQLGNGSLQ---DQRVPVRAWGL--WNISAVGAGDLHSLAMKSDGTVWTWG 123
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGKIH 123
G GQLG + T R P+ V G V VA G SH+L DG +
Sbjct: 124 GNNFGQLG-------------DGTTTGRQAPVQVPGLGEVVRVAAGFSHSLALKTDGTVW 170
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N G+ + +T P V + ++ +AAG HS L
Sbjct: 171 AWGSNGAGRLGDGTTTQRLMPVQVQ-GLPTIKAIAAGNAHSLAL 213
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG + GQLG + D+ + P +V + G+ VA G H+ + G ++AWG
Sbjct: 520 LWTWGDNNTGQLGDGTTV--DRPI-PTQVPGVTGVV--SVAAGLYHSLVVKVDGTVWAWG 574
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGKI 122
GQLG G T + +P+++ PN GV + G H+L DG +
Sbjct: 575 SNYEGQLGGG--TTTIRPVPSQT------------PNLTGVVAITAGLYHSLALKTDGTV 620
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACSLKELCEFR 180
WGYN +GQ N +T P+ V G V L AG HS A+ TD +R
Sbjct: 621 WAWGYNLHGQLGNGNTTTQQVPTQVPGFSGGV-SLGAGIYHSLAIKTDGSVWTWGYNYR 678
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG G+LG + + L+P +V L IK +A G H+ AL G ++AWG
Sbjct: 169 VWAWGSNGAGRLGDGTTT---QRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWG 223
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
GQLG ++ +R +P LV + N L A G +H+LV DG
Sbjct: 224 SNSNGQLG-------------DTTAGYRMLPALVPGLTNATGLSA-GSNHSLVRQADGTT 269
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
WG N+YGQ + +T P V
Sbjct: 270 WVWGANTYGQLGDGTTTSRSAPQQV 294
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYAW 63
++ WG + GQLG + L R + G+ ++ +A G H + G ++ W
Sbjct: 769 VWAWGDNTYGQLGDGT------TLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVWTW 822
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G TR +P + +P L GV VA G++H+L DG +
Sbjct: 823 GNNAKGQLGDGTTTRRL--VPTQ-------VPGLT---GVVAVAAGYAHSLALKADGTVW 870
Query: 124 GWGYNSYGQAANEKST 139
GWG N YGQ + +T
Sbjct: 871 GWGENIYGQLGDGTTT 886
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG S +P+R AL + VA G H A G ++AW
Sbjct: 369 EVWTWGHNVEGQLGEGS---SSYSAVPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAW 423
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T + +P + +P L + VA GH +L DG +
Sbjct: 424 GDNAKGQLGDG--TTAQRLLPTQ-------VPGLT---NMVAVAAGHHSSLALKADGTVW 471
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N+ GQ N +T P+ V G V +AAG GH+ AV D
Sbjct: 472 AWGDNANGQLGNGSTTDRSNPTQVPGLTGVV-SIAAGPGHALAVKADGT 519
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 44/198 (22%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++TWG + GQLG + + L+P +V L G+ VA G H+ AL + G +
Sbjct: 815 MDGTVWTWGNNAKGQLGDGTTT---RRLVPTQVPGLTGVVA--VAAGYAHSLALKADGTV 869
Query: 61 YAWGGCQAGQLGLGPQTR-------------------SFSFIPNESD------------- 88
+ WG GQLG G T+ ++ + ++D
Sbjct: 870 WGWGENIYGQLGDGTTTQRVAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQ 929
Query: 89 -----TYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAW 142
T R P LV +GV ++ H H+L DG + WGYNS GQ + +T
Sbjct: 930 LGIGTTTTRLAPTLVPSLSGVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRH 989
Query: 143 YPSPVDWCVGEVRKLAAG 160
P+ + V+ ++AG
Sbjct: 990 VPTQAP-SLSSVKAVSAG 1006
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG + GQLG + S P++V L G+ V +H+ L S G ++ WG
Sbjct: 270 WVWGANTYGQLGDGTTTS---RSAPQQVSGLAGV--DGVLGAELHSLVLKSDGTVWTWGS 324
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGH-SHTLVYMRDGKIH 123
Q GQLG G Q + R +P+ V+ +GV VA G H++ M +G++
Sbjct: 325 NQRGQLGDGTQEQ-------------RLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVW 371
Query: 124 GWGYNSYGQAANEKSTYAWYP 144
WG+N GQ S+Y+ P
Sbjct: 372 TWGHNVEGQLGEGSSSYSAVP 392
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + LLP +V L + VA G + AL + G ++AWG
Sbjct: 420 VWAWGDNAKGQLGDGTTA---QRLLPTQVPGLTNMVA--VAAGHHSSLALKADGTVWAWG 474
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + P + +P L GV +A G H L DG +
Sbjct: 475 DNANGQLGNGSTTDRSN--PTQ-------VPGLT---GVVSIAAGPGHALAVKADGTLWT 522
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+ GQ + + P+ V G V +AAG HS V+
Sbjct: 523 WGDNNTGQLGDGTTVDRPIPTQVPGVTGVV-SVAAGLYHSLVV 564
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WG GQLG S + L R V A + +A G T A S G ++AWG
Sbjct: 721 WAWGSNDKGQLGDGSARWHYAPTLSRLVGA------RGLAAGDRFTAARKSDGTVWAWGD 774
Query: 66 CQAGQLGLGPQ--TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG G TRS + + +D V+ +A G H +V DG +
Sbjct: 775 NTYGQLGDGTTLATRSPAQVSGLTD--------------VEGLAAGEGHVVVVKMDGTVW 820
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N+ GQ + +T P+ V G V +AAG HS L
Sbjct: 821 TWGNNAKGQLGDGTTTRRLVPTQVPGLTGVV-AVAAGYAHSLAL 863
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + L P V +L G+ ++ H+ AL G ++AWG
Sbjct: 919 LWAWGYNAHGQLG---IGTTTTRLAPTLVPSLSGVV--SLSATHQHSLALKPDGTVWAWG 973
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + +P ++ P L + V+ V+ G ++L DG +
Sbjct: 974 YNSNGQLGDG--TTTTRHVPTQA-------PSL---SSVKAVSAGFEYSLAVKADGTVWS 1021
Query: 125 WGYNSYGQAANEKSTYAWYPSPV 147
WG N GQ + +T P+ V
Sbjct: 1022 WGINDRGQLGSGTATPRATPTQV 1044
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
VA G HT A+ S G ++AWG GQLG G + +P + + +
Sbjct: 53 VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNG--SLQDQRVPVRAWGLWN----------I 100
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
V G H+L DG + WG N++GQ + +T P V +GEV ++AAG H
Sbjct: 101 SAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVP-GLGEVVRVAAGFSH 159
Query: 164 SAVL 167
S L
Sbjct: 160 SLAL 163
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + + + +P +V G + G H+ A+ + G+++ WG
Sbjct: 620 VWAWGYNLHGQLGNGNTTT---QQVPTQVPGFSGGV--SLGAGIYHSLAIKTDGSVWTWG 674
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T + T GV +A G H++ DG
Sbjct: 675 YNYRGQLGDGTTTSRTTPTQVAGFT------------GVSFLAAGEFHSVALRTDGTAWA 722
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 160
WG N GQ + + + + P+ + VG R LAAG
Sbjct: 723 WGSNDKGQLGDGSARWHYAPT-LSRLVG-ARGLAAG 756
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + + +P + +L +K V+ G ++ A+ + G +++WG
Sbjct: 969 VWAWGYNSNGQLGDGTTTT---RHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWG 1023
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T P + T + N V L+ +H LV DG + G
Sbjct: 1024 INDRGQLGSGTAT------PRATPTQVAGL------NSVTLLLAARAHALVVSADGTMRG 1071
Query: 125 WGYNSYGQ 132
+G N GQ
Sbjct: 1072 FGDNEAGQ 1079
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 4 DIYTWGLGSVGQLGHC----SLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSK 57
+++TWG G G+LGH L GD + P+ + AL G++I+ V CG + ALTS
Sbjct: 536 ELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTST 595
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVY 116
G L+AW GC A LG G + T R + + N + VACG SH L
Sbjct: 596 GQLFAW-GCGAC-LGCG----------SPESTALRPKLVEELANTRIVDVACGDSHCLAL 643
Query: 117 MRDGKIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG N+ GQ S + P V G V +++AG HS T
Sbjct: 644 THDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWT 697
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+++ AL G +K ++ G H+ A+T G L+
Sbjct: 483 EVFSWGDGDYGKLGHGN---SSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFT 539
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG G+LG G R + + Y + +V ++ V CG +L G++
Sbjct: 540 WGEGDYGRLGHGDSNRKLGH-GDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQL 598
Query: 123 HGWG 126
WG
Sbjct: 599 FAWG 602
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL S +K L P+ A + + G T + S G + A
Sbjct: 378 EVYVWGSNSSHQLAEGS---QEKILQPKLSPAFANA--QTIEAGQYCTFVVYSDGTVRAC 432
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LGLG N++ N V + HTL DG++
Sbjct: 433 GKGSYGRLGLGDSN-------NQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVF 485
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTD 169
WG YG+ + S+ YP + + V+ ++AG HSA +T+
Sbjct: 486 SWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE 533
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
++Y WG ++GQ G QS + P++VV LDG+ + ++ G H+ A T+
Sbjct: 648 EVYAWGNNAMGQCGQGHSQSPITK--PKKVVGLDGVTVHQISAGTSHSLAWTA 698
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG G GQLGH + DK++ P V +L G I+ + G HT AL+++G +YA+G
Sbjct: 943 VFTWGWGVHGQLGHGN---TDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFG 999
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG+G +S ++P+ V + + L+ G+ H L K++
Sbjct: 1000 CNIFGQLGVGSNVKS-------------SVPMKVSLSERITLITTGYFHNLAVSYTNKLY 1046
Query: 124 GWG 126
WG
Sbjct: 1047 IWG 1049
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 4 DIYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++YTWG G LG L+ G + + L + + V+CG HT A+T+ G +Y
Sbjct: 836 NVYTWGSSVHGCLGIGPSVLRYGSPQAI--TFFWLMEVEVLSVSCGHCHTLAVTNNG-VY 892
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMR 118
AWG Q GQLGLG + + P L+ +++ G H++
Sbjct: 893 AWGSSQFGQLGLGKVLQC-------------STPELITSLAQEVIIDAVAGQYHSVALTA 939
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLT 168
DG++ WG+ +GQ + + P+ V +G V R + AG H+ L+
Sbjct: 940 DGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALS 990
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 5 IYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y WG GQLG CS P + +L I D G H+ ALT+ G
Sbjct: 891 VYAWGSSQFGQLGLGKVLQCST--------PELITSLAQEVIIDAVAGQYHSVALTADGR 942
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
++ WG GQLG G +T + P LV ++ + GH+HTL
Sbjct: 943 VFTWGWGVHGQLGHG-------------NTDKKMTPTLVTSLLGTVIRYITAGHAHTLAL 989
Query: 117 MRDGKIHGWGYNSYGQ 132
+G ++ +G N +GQ
Sbjct: 990 STEGIVYAFGCNIFGQ 1005
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV 99
F + C G AL G +Y WG G LG+GP + ++ T+F + + V+
Sbjct: 817 FKRRPLCAGFSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYG--SPQAITFFWLMEVEVL 874
Query: 100 PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA- 158
V+CGH HTL +G ++ WG + +GQ K P + EV A
Sbjct: 875 S-----VSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAV 928
Query: 159 AGGGHSAVLT 168
AG HS LT
Sbjct: 929 AGQYHSVALT 938
>gi|26354741|dbj|BAC40997.1| unnamed protein product [Mus musculus]
Length = 391
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ + + CG HT ALT +G LYAW
Sbjct: 61 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGK 121
G GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 118 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 166
Query: 122 IHGWG 126
++ WG
Sbjct: 167 VYMWG 171
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V L + ++ACG + A+ G +Y
Sbjct: 8 ELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 64
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD 119
WG GQLGLG + P+ V V + CG++HTL +
Sbjct: 65 WGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCGYAHTLALTDE 111
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N+YGQ
Sbjct: 112 GLLYAWGANTYGQ 124
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
AL + G L+AWG GQ+G G P R + + V +ACG +
Sbjct: 2 ALAADGELFAWGYNNCGQVGSGSTANQ----PTP-----RKVTNCLHTKRVVNIACGQTS 52
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
++ + G+++GWGYN GQ + P V G V ++ G H+ LTD
Sbjct: 53 SMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 110
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+Y WG + GQLG S + L P +++ I+ AC HT A ++G +Y W
Sbjct: 114 LYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 170
Query: 64 GGCQAGQLGLGPQTRSF 80
G C+ GQ + P F
Sbjct: 171 GQCR-GQSVILPHLTHF 186
>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Glycine max]
Length = 472
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WGL G C S D EL P V +L GI I+ VA G HT + G +YA+GG
Sbjct: 319 FGWGL-----YGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGG 373
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G ++++T R + + N V+ ++CG HT + +GK+
Sbjct: 374 NQFGQLGTG---------GDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFC 424
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 425 WGWNKYGQ 432
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 10 LGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
+ S Q S S D + LP V G+ I VA GG HT AL+ G ++ WG
Sbjct: 189 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 248
Query: 69 GQLGLGPQTRSFS---FIP-NESDTYFRNIPILVVPNG----------VQLVACGHSHTL 114
GQLGLG + R S +P S +Y +++ + + + ++ +ACG H+
Sbjct: 249 GQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSA 308
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
V G + +G+ YGQ + PS V +G ++ +AAG H+
Sbjct: 309 VITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHT 359
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 4 DIYTWGLGSVGQLG--------------HCSLQSGDKELLPRRVVALD-------GIFIK 42
++ WG G GQLG C S + + R ++ D G +IK
Sbjct: 239 QVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIK 298
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
+ACGG H+ +T GA+ +G GQ G G S P+ + G
Sbjct: 299 GIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELS--PSCVSSLL----------G 346
Query: 103 VQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKL 157
+Q+ VA G HT+ DG ++ +G N +GQ P +D E V+++
Sbjct: 347 IQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRI 406
Query: 158 AAGGGHSAVLTD 169
+ G H+A++ D
Sbjct: 407 SCGARHTALIAD 418
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S G LG G+ L +V L + VA G +H+ ALT G ++AWG
Sbjct: 313 VWVWGHNSYGVLGS---NVGEHSFLLVQVKGLKNVVA--VAAGRLHSVALTKNGTIWAWG 367
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
GQLG E++++ N+P V + V +A G SHTL RDG +
Sbjct: 368 NNAFGQLG------------RENNSFSLNLPYKVKWLDNVVAIATGGSHTLAIKRDGTVW 415
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
WG N+ GQ N ++ P+ V V + AG HS
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPTCVKGLNNAVL-VEAGSQHS 455
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 11 GSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
G+V G +L + K L P ++ L G+ VA G H+ AL G +++WG
Sbjct: 564 GTVWSWGDTNLDNKKKYLNFSEKPVKIKGLSGVV--KVAAGKYHSLALKKDGTVWSWGYN 621
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG G TR SF+P N V +A G H++ +DG + WG
Sbjct: 622 AYGQLGNG--TRETSFVPVRVKGL----------NNVVAIAAGDYHSMALKKDGTVWVWG 669
Query: 127 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
N GQ ++ P V+ + V +AAG HS L
Sbjct: 670 SNIRGQLGRRNIEFSTVPLKVEK-LDNVVAIAAGDTHSVAL 709
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
I+ WG + GQLG ++ L LP +V LD + +A GG HT A+ G +++W
Sbjct: 363 IWAWGNNAFGQLGR---ENNSFSLNLPYKVKWLDNVVA--IATGGSHTLAIKRDGTVWSW 417
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG G T S+IP T + + N LV G H+L +DG +
Sbjct: 418 GANNKGQLGNG--TYKSSYIP----TCVKGL------NNAVLVEAGSQHSLAVDKDGTVW 465
Query: 124 GWGY 127
WG+
Sbjct: 466 VWGF 469
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 32 RVVALDGI-FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
+++ LD I ++ +A G H+ A+ + G +++WG L + + +F +E
Sbjct: 537 KLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWG-----DTNLDNKKKYLNF--SEKPVK 589
Query: 91 FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150
+ + +GV VA G H+L +DG + WGYN+YGQ N ++ P V
Sbjct: 590 IKGL------SGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVK-G 642
Query: 151 VGEVRKLAAGGGHSAVL 167
+ V +AAG HS L
Sbjct: 643 LNNVVAIAAGDYHSMAL 659
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G+LG+ + + P RV L + ++ GG H+ AL GA++ WG
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSV-PVRVKGLSDVIA--ISAGGFHSIALNKDGAVWIWG 269
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIH 123
G I IP+ + N V +A G+ H++ DG +
Sbjct: 270 G---------------GIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVW 314
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
WG+NSYG + +++ V + V +AAG HS LT
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLLVQVK-GLKNVVAVAAGRLHSVALT 358
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG + GQLG+ + ++ +P RV L+ + +A G H+ AL G ++ WG
Sbjct: 615 VWSWGYNAYGQLGNGTRET---SFVPVRVKGLNNVVA--IAAGDYHSMALKKDGTVWVWG 669
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG + F +P+ V + V +A G +H++ +DG +
Sbjct: 670 SNIRGQLG-------------RRNIEFSTVPLKVEKLDNVVAIAAGDTHSVALKKDGTVW 716
Query: 124 GWG 126
WG
Sbjct: 717 VWG 719
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + G+LG SL+ +P +V L + V+ G H+ AL G +++WG
Sbjct: 163 VWAWGINNHGELGIGSLKP---SAVPVKVKGLKDVVA--VSAGLYHSLALKRDGTVWSWG 217
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ G+LG P ++ Y ++P+ V + V ++ G H++ +DG +
Sbjct: 218 YNEDGELGNRP-----------TEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVW 266
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG + N K ++ P + W + +V +AAG HS L D
Sbjct: 267 IWGGGIIEK--NGKIDNSYIPVRIRW-LNKVVAIAAGYRHSIALKD 309
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
+A G + A+ S G+++AWG G+LG+G S P+ + + +V
Sbjct: 147 IAAGWDFSLAVGSDGSVWAWGINNHGELGIG------SLKPSAVPVKVKGLKDVVA---- 196
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGG 162
V+ G H+L RDG + WGYN G+ N + PV + +V ++AGG
Sbjct: 197 --VSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGF 254
Query: 163 HSAVL 167
HS L
Sbjct: 255 HSIAL 259
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 47 GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL 105
G +HT A+ G ++AWG GQLG G S IP+ V V
Sbjct: 50 GSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSC-------------IPVRVKGLKDVVA 96
Query: 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
V+ G H+L +DG + WG+ +YGQ ++ Y + +PV V E++ + A
Sbjct: 97 VSAGTFHSLALKKDGSVWIWGHTNYGQRKSD--VYRDFTTPVK--VKELKNIVA 146
>gi|281212541|gb|EFA86701.1| hypothetical protein PPL_00504 [Polysphondylium pallidum PN500]
Length = 237
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKDVACGGVHTCALTSKGALY 61
IY WG + GQLG S + LP+ + F I + G ++ +LT G L
Sbjct: 18 IYGWGWTNDGQLGSISNEKDKPVPLPKEISMEQPEFSGNIVGIYAGSDYSMSLTRDGRLI 77
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMR 118
+WG + GQLG G D N P + NG ++ V+CG SHT++
Sbjct: 78 SWGSGEFGQLGHG-------------DCQHSNTPTAI--NGFEAIRFVSCGFSHTMIIDS 122
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLTDACSL 173
G ++ +G+N GQ + P+ VD +C +++ +AAG HS LT++ L
Sbjct: 123 KGDLYTFGWNGSGQLGLGDKSNRSVPTLVDPMLFCGEKLKMVAAGRAHSVALTESGRL 180
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 23/136 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ +WG G GQLGH Q + P + + I + V+CG HT + SKG LY +G
Sbjct: 76 LISWGSGEFGQLGHGDCQHSNT---PTAINGFEAI--RFVSCGFSHTMIIDSKGDLYTFG 130
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-----NGVQLVACGHSHTLVYMRD 119
+GQLGLG ++ R++P LV P +++VA G +H++
Sbjct: 131 WNGSGQLGLGDKSN-------------RSVPTLVDPMLFCGEKLKMVAAGRAHSVALTES 177
Query: 120 GKIHGWGYNSYGQAAN 135
G++ WG S G+ N
Sbjct: 178 GRLFTWGSGSKGKLGN 193
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHTCALTSKGALY 61
D+YT+G GQLG L +P V + G +K VA G H+ ALT G L+
Sbjct: 125 DLYTFGWNGSGQLG---LGDKSNRSVPTLVDPMLFCGEKLKMVAAGRAHSVALTESGRLF 181
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
WG G+LG G + D I V N +A G HTL+ +
Sbjct: 182 TWGSGSKGKLGNGDTSNELLVPTQLYDIDENQIETPKVVN----IATGFDHTLIQTK 234
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ + D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DVVKVRCGSQFSVALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL----DGIFIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ V L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP 146
H WG N Q + + +A P P
Sbjct: 732 HSWGSND--QCQHFDTLHATKPEP 753
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHTCALTSKGALY 61
+YT+G G+LG DK LP V V LD I V CGG HT LT G Y
Sbjct: 212 VYTFGEDDNGKLGR-----SDK--LPNDVPEGVELDENCIS-VKCGGSHTIILTESGKAY 263
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
A+G +GQLGLG FS IP + N+ ++ V CG SH+ +GK
Sbjct: 264 AFGSNFSGQLGLGNFETEFS-IPQRVNFTDENVNLI-------YVTCGESHSAFLTDEGK 315
Query: 122 IHGWGYNSYGQAANE-KSTYAWYPSPVD-----WCVGEVRKLAAGGGHSAVLTDACSL-- 173
++ G G+ NE +ST P+ ++ +C ++ GG H+ VL A L
Sbjct: 316 LYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCT----YVSCGGCHTMVLAKALKLEN 371
Query: 174 -----------KELCEFRLAESVTLSNASEIEDVASRTGSEA 204
K++ +L++ + N E E+ S++ +E+
Sbjct: 372 HENASECIINEKKISNEKLSQD-HVQNNKESENCDSKSNTES 412
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
+K+++CG HT + G ++ +G GQLG G I N+ P +
Sbjct: 38 VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTK-----IVNKPSCLKSLKPFQSIH 92
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---L 157
VACG SHTL+ KI +G NS GQ W P + + + L
Sbjct: 93 -----VACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIAL 147
Query: 158 AAGGGHSAVLTDACSL 173
+AG HSA LT+ S+
Sbjct: 148 SAGCHHSAFLTEEGSV 163
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G GQLG + +K + + I VACG HT T ++A+G
Sbjct: 57 VFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIH---VACGKSHTLISTECNKIFAFG 113
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-----NGVQLVACGHSHTLVYMRD 119
GQLG+G D R +P ++ N + ++ G H+ +
Sbjct: 114 CNSDGQLGVG-------------DLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEE 160
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
G ++ WG NS GQ + Y P +++ + ++ G H+A ++
Sbjct: 161 GSVYIWGDNSDGQCGIKNENYLLNPRKIEF-QNPINSISCGYYHTAFIS 208
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG+ + GQLG + + +P + L G+ VA G H A+ + +++AWG
Sbjct: 315 VWTWGINTYGQLGDGTTIA---RSVPVQTSGLSGVVA--VAAGRTHALAMRANNSIWAWG 369
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQ G ++RS F P + N V +A + H+L DG +
Sbjct: 370 GNVNGQRG--DESRSVYFSPR------------TILNEVVTMAATNDHSLAVRSDGGLWA 415
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 173
WG N+ GQ + + W P+ V +G V +AAG HS + D SL
Sbjct: 416 WGANNEGQLGDGTTKNRWAPAEV---LGNVVSVAAGRRHSLAVRDDGSL 461
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG +L + GD P +V L G+ VA G H+ AL G+++AW
Sbjct: 115 VWAWGRNDDGQLGDGTLSTRGD----PVQVQGLSGV--TTVALGATHSLALCYDGSVWAW 168
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRDG 120
G GQLG G + R P +V G+Q VA G +H+L + DG
Sbjct: 169 GANDHGQLGDG-------------TSIARRTPQMVA--GLQEVVAVAAGANHSLAVLSDG 213
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT---DACSLKELC 177
+ WG N GQ + + P P+ G V +A+G HS L + +
Sbjct: 214 TVWAWGENYDGQLGDGTTVTRRVPVPIQGLSGIV-AVASGTSHSLALRYDGNVWAWGSNY 272
Query: 178 EFRLAESVTLSNASEIE 194
+L + +LS +S ++
Sbjct: 273 SGQLGDGSSLSRSSPVQ 289
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQLG + + P V+ + VA G H+ A+ G+L+AWG
Sbjct: 413 LWAWGANNEGQLGDGTTK---NRWAPAEVLG----NVVSVAAGRRHSLAVRDDGSLWAWG 465
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG G T S IP + +P + +G+ VA G +++ D +
Sbjct: 466 SNTVGQLGDG--TGSSRTIPMQ-------VPGI---SGIASVAAGSDYSVALRYDRTLWA 513
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC--SLKELCEFRL 181
WG NSYGQ + + P+ V G V +A G GH AV ++ + + +L
Sbjct: 514 WGENSYGQLGDGTTVNRHVPTRVQGLSGIV-AIATGNGHMLAVRSNGTVWAWGDNSSGQL 572
Query: 182 AESVTLSNASEIE 194
+ T++ A+ ++
Sbjct: 573 GDGTTINRATPVQ 585
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG + +P RV L GI +A G H A+ S G ++AWG
Sbjct: 511 LWAWGENSYGQLGDGTTV---NRHVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWG 565
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIH 123
+GQLG G T R P+ V V +G+ VA G +H+L DG +
Sbjct: 566 DNSSGQLGDG-------------TTINRATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLW 612
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
WG N+ Q + P+ V +G ++A HS AVL D
Sbjct: 613 AWGINNTSQLGDGTGIPRLVPTQVQ-GIGSAVAVSAAKHHSLAVLADGT 660
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF-IKDVACGGVHTCALTSKGALYA 62
++ WG GQLG D + RRV V + G+ I VA G H+ AL G ++A
Sbjct: 215 VWAWGENYDGQLG-------DGTTVTRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWA 267
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG +GQLG G + R+ P+ V +G+ V G +++ DG
Sbjct: 268 WGSNYSGQLGDG-------------SSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGT 314
Query: 122 IHGWGYNSYGQ 132
+ WG N+YGQ
Sbjct: 315 VWTWGINTYGQ 325
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 26 KELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
++ P ++ L G+ D G + A+ S G ++AWG GQLG G +
Sbjct: 83 RQDWPGQLPGLSGMVSID--SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLST------- 133
Query: 86 ESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
R P+ V +GV VA G +H+L DG + WG N +GQ + S P
Sbjct: 134 ------RGDPVQVQGLSGVTTVALGATHSLALCYDGSVWAWGANDHGQLGDGTSIARRTP 187
Query: 145 SPVDWCVGEVRKLAAGGGHS-AVLTDAC--SLKELCEFRLAESVTLS 188
V + EV +AAG HS AVL+D + E + +L + T++
Sbjct: 188 QMVA-GLQEVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + QLG + G L+P +V + V+ H+ A+ + G L+ WG
Sbjct: 611 LWAWGINNTSQLGDGT---GIPRLVPTQVQGIGSAVA--VSAAKHHSLAVLADGTLWDWG 665
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG N + + + + G + G H+L DG + G
Sbjct: 666 ANNYGQLGRNQDNT------NPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVG 719
Query: 125 WGYNSYGQ 132
WG+N+YGQ
Sbjct: 720 WGHNTYGQ 727
>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
Length = 1025
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELL-PRRV-VALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG G G+LGH + SG ++ PR+V + L +K +A HT T G
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG + GQLG + ++ R + L + + VA + HT V
Sbjct: 267 VFTWGSNREGQLG---------YTSVDTQPIPRRVSSL--KSKIVAVAAANKHTAVISES 315
Query: 120 GKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRK-LAAGGGHSAVL 167
G++ WG N GQ +N S Y P V++ G+V K +AA H+ VL
Sbjct: 316 GEVFTWGCNKKGQLGYGTSNSASNYT--PRVVEYLKGKVLKGVAAAKYHTIVL 366
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG G QLG +G+ + LP +V +L G FIK V+ H+ A++++G +Y
Sbjct: 155 ELFSWGSGVNYQLG-----TGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVY 209
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG P+ F ++ R + + + V+ +A HT+V G
Sbjct: 210 TWGFGRGGRLG-HPE---FDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGG 265
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ WG N GQ P V ++ +AA H+AV++++
Sbjct: 266 EVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISES 315
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + +PRRV +L + VA HT ++ G ++ W
Sbjct: 266 EVFTWGSNREGQLGYTSV---DTQPIPRRVSSLKSKIVA-VAAANKHTAVISESGEVFTW 321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + ++ P + Y + ++ VA HT+V DG+I
Sbjct: 322 GCNKKGQLGYGTSNSASNYTPRVVE-YLKG-------KVLKGVAAAKYHTIVLGADGEIF 373
Query: 124 GWGY 127
WG+
Sbjct: 374 TWGH 377
>gi|444917320|ref|ZP_21237422.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
gi|444711215|gb|ELW52165.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
Length = 773
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG + GQ+G+ + ++L P +V L + VA G +H+ AL G ++AWG
Sbjct: 520 VWAWGDNTSGQVGNGTKL---RQLAPIQVPDLTNVVA--VATGSMHSFALRQDGTVWAWG 574
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G TR IP + +P L V +A G HTL DG +
Sbjct: 575 DNQFGQLGDG--TRLGRLIPFQ-------VPGLT---NVVAIASGAFHTLALRADGTVWA 622
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGGHSAVL 167
WGYN +GQ + ST ++ P+P + +V LAAG H+ L
Sbjct: 623 WGYNWHGQLG-DGSTSSFRPTPARVEGLTDVSALAAGDWHTLAL 665
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
H ++ WG GQLG + + L P RV L + + VA G +H+ AL G ++
Sbjct: 57 HGALWAWGYNDFGQLGDGT---ANAHLTPIRVPGLQDV--EAVANGSLHSLALRRDGTVW 111
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG Q GQLG G P + +++P L V +A H+L RDG
Sbjct: 112 TWGDNQFGQLGTGE--------PWVTHATPQHLPSLT---NVAAIAASEDHSLALRRDGT 160
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRL 181
+ WG N YGQ + P+ H A LTD ++ RL
Sbjct: 161 VWVWGNNRYGQLGGAGNVLLLEPT-----------------HLAGLTDIAAIATSPSHRL 203
Query: 182 A 182
A
Sbjct: 204 A 204
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + L+P +V L + +A G HT AL + G ++AWG
Sbjct: 570 VWAWGDNQFGQLGDGTRLG---RLIPFQVPGLTNVVA--IASGAFHTLALRADGTVWAWG 624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
GQLG G S + FR P V V +A G HTL DG +
Sbjct: 625 YNWHGQLGDG------------STSSFRPTPARVEGLTDVSALAAGDWHTLALRTDGTVW 672
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLTDACSL 173
WG N GQ A+ P+ V G L+AG +S A L D +L
Sbjct: 673 AWGRNGSGQLADGTVEPRSVPTQVTGVKGRAVALSAGADNSLARLADGTAL 723
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 IYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG G LG S LQ+ P +V L G+ +A GG AL G L+ W
Sbjct: 320 VWAWGDRMDGPLGGTSGLQT-----TPAQVQGLRGVMA--IAAGGRQALALRRDGTLWGW 372
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGKI 122
G + GQLG G + R +P+ + G ++ VA H L DG +
Sbjct: 373 GDNRFGQLGTG--------------SNLRTVPVPLKDLGSEVSVAFNSYHALAVRADGSL 418
Query: 123 HGWGYNSYGQ 132
WG N GQ
Sbjct: 419 WAWGSNHRGQ 428
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG S S P RV L + +A G HT AL + G ++AWG
Sbjct: 620 VWAWGYNWHGQLGDGSTSS--FRPTPARVEGL--TDVSALAAGDWHTLALRTDGTVWAWG 675
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
+GQL G + P R++P V V ++ G ++L + DG
Sbjct: 676 RNGSGQLADG------TVEP-------RSVPTQVTGVKGRAVALSAGADNSLARLADGTA 722
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPV 147
GWG N++ + + ST P+ V
Sbjct: 723 LGWGSNAFSKIGDGVSTVHAAPTRV 747
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 23 SGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
S D P R A D +A G H+ A+ + GAL+AWG GQLG G +
Sbjct: 26 SADDAPFPER--AWDAAAGNKLATQG-HSLAVDAHGALWAWGYNDFGQLGDGTANAHLTP 82
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
I +P L V+ VA G H+L RDG + WG N +GQ
Sbjct: 83 I---------RVPGL---QDVEAVANGSLHSLALRRDGTVWTWGDNQFGQ 120
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 10/129 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG GQLG G+ LL P + L I +A H AL + G ++AW
Sbjct: 161 VWVWGNNRYGQLGGA----GNVLLLEPTHLAGL--TDIAAIATSPSHRLALRADGTVWAW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLG G T S + T ++ + H+L RDG +
Sbjct: 215 GSNQTGQLGDG-TTESRGTVAQV--TALTDVVAIAAGGTGSGTINKTGHSLALRRDGTVW 271
Query: 124 GWGYNSYGQ 132
WG N +GQ
Sbjct: 272 AWGDNQFGQ 280
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG + Q P RV L + ++ + AL G ++AWG
Sbjct: 270 VWAWGDNQFGQLGDGTNQ---PRSTPARVQGLTNVV--SISGNSRSSLALRRDGTVWAWG 324
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG T P + GV +A G L RDG + G
Sbjct: 325 DRMDGPLG---GTSGLQTTPAQVQGL----------RGVMAIAAGGRQALALRRDGTLWG 371
Query: 125 WGYNSYGQ 132
WG N +GQ
Sbjct: 372 WGDNRFGQ 379
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 30 PRRVVALDGIFIKDVACGGV--HTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P V L I VA H A+ G ++AWG +GQ+G G + R + I
Sbjct: 488 PGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGDNTSGQVGNGTKLRQLAPI---- 543
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
+P L V VA G H+ +DG + WG N +GQ
Sbjct: 544 -----QVPDLT---NVVAVATGSMHSFALRQDGTVWAWGDNQFGQ 580
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++TWG GQLG + + P+ + +L + +A H+ AL G ++ WG
Sbjct: 110 VWTWGDNQFGQLG--TGEPWVTHATPQHLPSL--TNVAAIAASEDHSLALRRDGTVWVWG 165
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG + L + +A SH L DG +
Sbjct: 166 NNRYGQLG------------GAGNVLLLEPTHLAGLTDIAAIATSPSHRLALRADGTVWA 213
Query: 125 WGYNSYGQ 132
WG N GQ
Sbjct: 214 WGSNQTGQ 221
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P R+VAL G+ ++ + G H+ ALT +G LYAW
Sbjct: 216 EVYGWGYNGNGQLG---LGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAW 272
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 273 GANTYGQLGTGNKSNQLS--PVQIMTEKERI--------VEIAACHSTHTSAAKTQSGQV 322
Query: 123 HGWG 126
+ WG
Sbjct: 323 YMWG 326
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG QLG+ + G + P V A L + +VACG H+ ALT G +YA
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQG---VAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYA 166
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRN-IPILVVPNGVQLVACGHSHTLVYMRDGK 121
WG GQ+G G + P + +N + + +V CG + +L + +G+
Sbjct: 167 WGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIV--------CGQTSSLAVVDNGE 216
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
++GWGYN GQ + P + G V+++ +G HS LTD
Sbjct: 217 VYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
++Y WG + GQ+G S + + PRRV + L + CG + A+ G +Y
Sbjct: 163 EVYAWGYNNCGQVGSGSTAN---QPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYG 219
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDG 120
WG GQLGLG + P LV G VQ + G++H+L +G
Sbjct: 220 WGYNGNGQLGLGNNGNQLT--PCR----------LVALQGLCVQQIVSGYAHSLALTDEG 267
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
++ WG N+YGQ + SPV + R + HS
Sbjct: 268 LLYAWGANTYGQLGTGNKSNQL--SPVQIMTEKERIVEIAACHST 310
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 21/153 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
++Y GL LG QS ++P++V L G + ++ G G H T G L+A
Sbjct: 57 EVYALGLNCSNCLGTGDSQSS---IVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFA 113
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMR 118
WG QLG G + + P+LV N V VACG H++
Sbjct: 114 WGHNGYSQLGNGTTNQGVA-------------PVLVSANLLNKKVTEVACGSHHSMALTD 160
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G+++ WGYN+ GQ + + P V C+
Sbjct: 161 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCL 193
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCAL-TSKGALY 61
+Y WG + GQLG +G+K +L P +++ ++ AC HT A T G +Y
Sbjct: 269 LYAWGANTYGQLG-----TGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVY 323
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P F+
Sbjct: 324 MWGQCR-GQSIVLPYLTHFA 342
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 54 LTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT 113
+T+ +YA G + LG G S +P + D IL V L H
Sbjct: 52 ITADDEVYALGLNCSNCLGTGDSQSSI--VPKKVD-------ILSGRKVVSLSYGSGPHI 102
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLTDA 170
L+ DG++ WG+N Y Q N + P V + +V ++A G HS LTD+
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDS 161
>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Glycine max]
Length = 459
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 6 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG 65
+ WGL G C S D EL P V +L GI I+ VA G HT + G +YA+GG
Sbjct: 306 FGWGL-----YGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGG 360
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKIHG 124
Q GQLG G ++++T R + + N V+ ++CG HT + +GK+
Sbjct: 361 NQFGQLGTG---------GDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFC 411
Query: 125 WGYNSYGQ 132
WG+N YGQ
Sbjct: 412 WGWNKYGQ 419
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 10 LGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQA 68
+ S Q S S D + LP V G+ I VA GG HT AL+ G ++ WG
Sbjct: 176 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 235
Query: 69 GQLGLGPQTRSFS---FIP-NESDTYFRNIPILVVPNG----------VQLVACGHSHTL 114
GQLGLG + R S +P S +Y +++ + + + ++ +ACG H+
Sbjct: 236 GQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSA 295
Query: 115 VYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
V G + +G+ YGQ + PS V +G ++ +AAG H+
Sbjct: 296 VITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHT 346
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 4 DIYTWGLGSVGQLG--------------HCSLQSGDKELLPRRVVALD-------GIFIK 42
++ WG G GQLG C S + + R ++ D G +IK
Sbjct: 226 QVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIK 285
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG 102
+ACGG H+ +T GA+ +G GQ G G S P+ + G
Sbjct: 286 GIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELS--PSCVSSLL----------G 333
Query: 103 VQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKL 157
+Q+ VA G HT+ DG ++ +G N +GQ P +D E V+++
Sbjct: 334 IQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRI 393
Query: 158 AAGGGHSAVLTD 169
+ G H+A++ D
Sbjct: 394 SCGARHTALIAD 405
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G+LGH + S D+ PR + +L G + D+A GG H+ +TS G L+ W
Sbjct: 409 EVFSWGEAEDGKLGHGNRNSCDR---PRVIESLRGKEVVDIAAGGAHSACITSTGELFTW 465
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGH--SHTLVYMR 118
G + G+LG G D+ + P LV GV++ VACG + TL
Sbjct: 466 GKGRYGRLGHG-------------DSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITD 512
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P V+ +G+ V K+ G S LT +
Sbjct: 513 DDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKS 565
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V AL G + +A G +H A T +G ++ WG
Sbjct: 568 VYTWGKGDYHRLGH---GSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWG 624
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G S S IP P LV + VACG +H+L +
Sbjct: 625 DNDEGQLGDG----STSAIPR---------PRLVAALQGKKINRVACGSAHSLAW 666
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P++V AL G + V CG + ALT G +Y WG
Sbjct: 516 VWSWGDGDYGKLGR---GGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWG 572
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G SD + R + G + +A G H + G++
Sbjct: 573 KGDYHRLGHG------------SDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEV 620
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
WG N GQ + ++ P V G ++ ++A G HS
Sbjct: 621 FTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHS 663
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ + IK VA GG H AL+S+G +++WG + G+LG G + N
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR--------NSC 429
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
D R I L V +A G +H+ G++ WG YG+ + S P V
Sbjct: 430 DRP-RVIESLRGKEVVD-IAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLV 487
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 488 EALKGVRVIDVACGSGDAQTL 508
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG GQLG S + + PR V AL G I VACG H+ A ++ + A
Sbjct: 619 EVFTWGDNDEGQLGDGSTSAIPR---PRLVAALQGKKINRVACGSAHSLAWSTSKPVNA 674
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 5 IYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG GQLG+ S+ S +P +V L + +A G H+ AL G ++AW
Sbjct: 368 VWSWGNNYYGQLGNGNSIDS----YVPVQVRGLKDVVA--IATGNAHSLALKKDGTVWAW 421
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G T SF+P + + + +V +A G H+L + +DG +
Sbjct: 422 GNNEFGQLGNG--TNKSSFVPVQ----VKGLKDVVA------IAAGSDHSLAFKKDGTVW 469
Query: 124 GWGYNSYGQAANEKSTYA-WYPSPVDWC-VGEVRKLAAGGGHSAVL 167
WG N +GQ N Y +Y PV + +V +AAG HS L
Sbjct: 470 AWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLAL 515
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + L+P +V L I +A G H+ A+ G ++AWG
Sbjct: 621 VWAWGDNFFGQLGNSPREK--YSLVPVQVKGLKDILA--IATGEWHSLAIKKDGTVWAWG 676
Query: 65 GCQAGQLGLGPQTR-SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
GQLG + +S++P + + I V ++ G H+L +DG +
Sbjct: 677 ENSTGQLGNETSGKDKYSYVPVQ----VKGI------KDVLAISAGSYHSLALKKDGTVW 726
Query: 124 GWGYNSYGQAAN 135
GWG N+ GQ N
Sbjct: 727 GWGANARGQLGN 738
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P ++ L + +A G H+ L G ++AWG GQLG P+ + +S +P +
Sbjct: 592 VPVQIKGLKDVVA--IAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREK-YSLVPVQVK 648
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE---KSTYAWYPS 145
+ +A G H+L +DG + WG NS GQ NE K Y++ P
Sbjct: 649 GL----------KDILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPV 698
Query: 146 PVDWCVGEVRKLAAGGGHSAVL 167
V + +V ++AG HS L
Sbjct: 699 QVK-GIKDVLAISAGSYHSLAL 719
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ S G +P +V L + VA G VH+ AL G ++AWG
Sbjct: 468 VWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLALKKDGTIWAWG 525
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G LG SF+P + + + +V +A G +H+LV +DG +
Sbjct: 526 SNYHGLLG---NDIERSFVPVQ----VKGLKDVVA------IAAGSNHSLVLKKDGTVWA 572
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHS 164
WG + NE S + PV + +V +AAG HS
Sbjct: 573 WG-EVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEHHS 612
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ + P +V L + +A G H+ AL G ++AWG
Sbjct: 268 VWAWGNNYYGQLGNGK---SEDSYDPVQVKNLKDVVA--IAAGENHSLALKKDGTIWAWG 322
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG + +P + F+++ +V +A G H+L +DG +
Sbjct: 323 DNEWGQLGNSISEKLC--VPVQ----FKSLKDVVA------IAAGCEHSLALKKDGTVWS 370
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 167
WG N YGQ N S ++ P V + +V +A G HS L
Sbjct: 371 WGNNYYGQLGNGNSIDSYVPVQVR-GLKDVVAIATGNAHSLAL 412
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I +A G H+ AL G ++AWG GQ G T S IP + + +V
Sbjct: 48 IIQIAAGNYHSLALKGDGTVWAWGWNHWGQCG----TEESSIIP----VKVKGLKDVVA- 98
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVGEVRKLAA 159
+A G H+L +DG + WG N GQ N + Y+ P V + +V +AA
Sbjct: 99 -----IAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVK-GLKDVVAIAA 152
Query: 160 GGGHS 164
G G+S
Sbjct: 153 GDGYS 157
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 45/203 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQLG+ +G+ ++P +V L + +A G ++ L G ++ WG
Sbjct: 115 VWAWGSNKDGQLGN--RDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLGLKKDGTVWCWG 170
Query: 65 GCQAGQLGLGPQT--------------------RSFSFIPNESDT---------YFRNI- 94
++ Q+ G + +S + T Y+ +
Sbjct: 171 LNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLR 230
Query: 95 -------PILVVPNGVQ---LVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
P+ V G++ +A G H+L +DG + WG N YGQ N KS ++ P
Sbjct: 231 RGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDP 290
Query: 145 SPVDWCVGEVRKLAAGGGHSAVL 167
V + +V +AAG HS L
Sbjct: 291 VQVK-NLKDVVAIAAGENHSLAL 312
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GQ G + + ++P +V L + +A G H+ L G ++AWG
Sbjct: 67 VWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVA--IAAGRYHSLTLKKDGTVWAWG 119
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGKIH 123
+ GQLG N + +P+ V V +A G ++L +DG +
Sbjct: 120 SNKDGQLG------------NRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVW 167
Query: 124 GWGYN 128
WG N
Sbjct: 168 CWGLN 172
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQLG+ + +P +V + + ++ G H+ AL G ++ WG
Sbjct: 672 VWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLA--ISAGSYHSLALKKDGTVWGWG 729
Query: 65 GCQAGQLGLG 74
GQLG G
Sbjct: 730 ANARGQLGNG 739
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 158
+ N + +A G+ H+L DG + WG+N +GQ E+S+ P V + +V +A
Sbjct: 44 LENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESSI--IPVKVK-GLKDVVAIA 100
Query: 159 AGGGHSAVL 167
AG HS L
Sbjct: 101 AGRYHSLTL 109
>gi|145355761|ref|XP_001422119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582359|gb|ABP00436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 399
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG GQLGH S P RV AL ACG HT + G +Y +G
Sbjct: 62 LYTWGRNERGQLGHGDYVS---RGTPTRVEALGETRCASAACGKGHTVVVCENGDVYGFG 118
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLG G + E D + P+ + + +CG T V RDG++
Sbjct: 119 SNKFGQLGCGTMKKQMKKGDAEDD---KLTPVKALVTNGKSASCGAEFTAVVTRDGEVFT 175
Query: 125 WGYNSYGQ------------AANEKSTYAWYPSP---VDWCVGE--VRKLAAGGGHSAVL 167
+G YGQ A++ K Y P P V GE + KLA G H A
Sbjct: 176 YGLPQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLACGTNHVACF 235
Query: 168 TDACSL 173
DA +
Sbjct: 236 DDAGKI 241
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 4 DIYTWGLGSVGQLG----HCSLQSGDKE---LLPRRVVALDGIFIKDVACGGVHTCALTS 56
D+Y +G GQLG ++ GD E L P + + +G K +CG T +T
Sbjct: 113 DVYGFGSNKFGQLGCGTMKKQMKKGDAEDDKLTPVKALVTNG---KSASCGAEFTAVVTR 169
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNI-PILVVPNG-----VQLVACGH 110
G ++ +G Q GQLG G + + Y P VV NG + +ACG
Sbjct: 170 DGEVFTYGLPQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLACGT 229
Query: 111 SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
+H + GKI WG YG+ + + P V+
Sbjct: 230 NHVACFDDAGKIWTWGNGGYGRLGHRVQKDEFAPKMVE 267
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 23 SGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
+GD + P ++ L G ++D ACG V K A+ WGG G+LG GP+ + S
Sbjct: 307 TGDNTMYPVPLMDLQGWVLRDFACGSVTFAGCAEKSAV-TWGGGAYGELGYGPKGKKSSA 365
Query: 83 IPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
P+ +P L + VACG+ +TL
Sbjct: 366 NPDL-------VPSLEGKT-TRRVACGNGYTL 389
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 30 PRRVVALDGIFIKDVACGG--VHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L VA G H A+ +G LY WG + GQLG G
Sbjct: 30 PHRYATLADKTWTRVAGGAAATHCAAIDDEGRLYTWGRNERGQLGHG------------- 76
Query: 88 DTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
D R P V G ACG HT+V +G ++G+G N +GQ
Sbjct: 77 DYVSRGTPTRVEALGETRCASAACGKGHTVVVCENGDVYGFGSNKFGQ 124
>gi|242045582|ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
gi|241924039|gb|EER97183.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
Length = 432
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++TWG G G LGH +ELLPR+V I ++ G HT A+T G LY W
Sbjct: 155 DVFTWGYGGFGALGHYVYH---RELLPRQVNGPWEGKITHISTSGAHTAAITDSGELYTW 211
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + + S N +P V VACG T+ DG++
Sbjct: 212 GRDEGDGRLGLGSGGGPGEAGSLSVPSKVN----ALPVPVAAVACGGFFTMALTSDGQLW 267
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLTD 169
WG NS + + W P V + +R ++A GG HS LTD
Sbjct: 268 SWGANSNFELGRGSNFSDWRPQLVP-SLKSIRVIQVACGGYHSLALTD 314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P +V AL + + VACGG T ALTS G L++WG +LG G N SD
Sbjct: 236 VPSKVNALP-VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRG---------SNFSD 285
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
+ +P L +Q VACG H+L +G++ W
Sbjct: 286 WRPQLVPSLKSIRVIQ-VACGGYHSLALTDEGEVLSW 321
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 1 MHLDIYTWGLGSVGQLG--------------HCSLQSGDKELLPR--RVVA---LDGIFI 41
+ + +WG G+ GQLG H L D L P R+ + G+ +
Sbjct: 30 IPFSLLSWGRGASGQLGGGKEERRLYPSPVAHLLLPESDPRLAPTPGRLPSAGETSGVEV 89
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
++CG H+ AL +G+++ WG G+LGLG ++ +F PN + R++
Sbjct: 90 -GISCGLFHS-ALLVEGSVWVWGKGDGGRLGLGDESSAFVPRPNPN---LRDL------- 137
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD--WCVGEVRKLAA 159
+L+A G H+ G + WGY +G + P V+ W G++ ++
Sbjct: 138 --RLLALGGIHSAALTTSGDVFTWGYGGFGALGHYVYHRELLPRQVNGPW-EGKITHIST 194
Query: 160 GGGHSAVLTDACSL 173
G H+A +TD+ L
Sbjct: 195 SGAHTAAITDSGEL 208
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+P + AL I +ACGG + A++ KG LY WG + QLG+ P +P + +
Sbjct: 339 IPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGV-PGLPEVQPLPVKVN 397
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTL 114
+ R+ + P+ V VA G SH +
Sbjct: 398 -FLRDGDEDLGPSRVISVAIGASHAM 422
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S +LG S S + P+ V +L I + VACGG H+ ALT +G + +W
Sbjct: 265 QLWSWGANSNFELGRGSNFS---DWRPQLVPSLKSIRVIQVACGGYHSLALTDEGEVLSW 321
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 66/148 (44%), Gaps = 29/148 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV------ALDG--------IFIKDVACG 47
D+ TWG GS G LGH GD++ L PRR+ A+DG + +ACG
Sbjct: 1926 DVLTWGFGSSGALGH-----GDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACG 1980
Query: 48 GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLV 106
HT A TS GALY WG AGQL S +I I V N G++ V
Sbjct: 1981 SYHTLAATSDGALYGWGDAAAGQL-------SVEYITAPEMVVLTPQRIRVPTNSGIRSV 2033
Query: 107 ACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
ACG + V G + WG + G A
Sbjct: 2034 ACGTFTSAVCTNQGHLFLWGSPAAGNGA 2061
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG+ S D+EL P V L+ I + G H+CAL+++G + WG
Sbjct: 1875 VFAFGAGFGGRLGNGS--ETDEEL-PFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWG 1931
Query: 65 GCQAGQLG-------LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
+G LG L P+ + N D V V +ACG HTL
Sbjct: 1932 FGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSV---VSAIACGSYHTLAAT 1988
Query: 118 RDGKIHGWGYNSYGQAANEKST 139
DG ++GWG + GQ + E T
Sbjct: 1989 SDGALYGWGDAAAGQLSVEYIT 2010
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D++ +G G G+LG S L P RV L I VACG HT ALT KG ++A+
Sbjct: 1824 DLFGFGWGEAGRLGTGETGSS---LYPTRVTDLQNI--AAVACGREHTLALTRKGRVFAF 1878
Query: 64 GGCQAGQLGLGPQT-RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G G+LG G +T F + Y + + G H+ +G +
Sbjct: 1879 GAGFGGRLGNGSETDEELPFAVQGLEDY-----------RIAAIDAGECHSCALSTEGDV 1927
Query: 123 HGWGYNSYG 131
WG+ S G
Sbjct: 1928 LTWGFGSSG 1936
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 32/156 (20%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV-------------ACGGVHT 51
+YT+G G G+LGH G++E V G F + +CG HT
Sbjct: 1764 LYTFGHGECGRLGH-----GNQEDCTEPVSV--GYFTSLIEAEGVDVGGVVEVSCGREHT 1816
Query: 52 CALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHS 111
A+T+ G L+ +G +AG+LG G +T S S P T +NI VACG
Sbjct: 1817 MAVTASGDLFGFGWGEAGRLGTG-ETGS-SLYPTRV-TDLQNIAA---------VACGRE 1864
Query: 112 HTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
HTL R G++ +G G+ N T P V
Sbjct: 1865 HTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAV 1900
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 31 RRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTY 90
RRVV +ACG HT +T LY +G + G+LG G Q + S Y
Sbjct: 1743 RRVV--------QIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPV---SVGY 1791
Query: 91 FRNI--PILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
F ++ V GV V+CG HT+ G + G+G+ G+ ++ + YP+ V
Sbjct: 1792 FTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVT 1851
Query: 149 WCVGEVRKLAAGGGHSAVLT 168
+ + +A G H+ LT
Sbjct: 1852 -DLQNIAAVACGREHTLALT 1870
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 85/209 (40%), Gaps = 48/209 (22%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG + GQLG+ + S + P V GI I VA G H+ ALTS G+L AWG
Sbjct: 108 VLAWGRNTEGQLGNGTTTSSGE---PVAVSLPSGIRIVAVAVGADHSLALTSTGSLLAWG 164
Query: 65 GCQAGQLGLGPQTRSFSFI-----PNESDTYF---------------------------- 91
GQLG G T S + + PN +
Sbjct: 165 SNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQ 224
Query: 92 --------RNIPILV-VPNG--VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
R+ P+ V +P G V +A G H+L D + WG NS+GQ + +T
Sbjct: 225 LGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTG 284
Query: 141 AWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
+ P V VG E +AAG HS LT
Sbjct: 285 SLLPVTVVLPVGAEATAIAAGRLHSLALT 313
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M I WG GQLG + + + R G + VA G H+ ALTS G +
Sbjct: 52 MSDAILAWGGNDGGQLGDGTTTDSSEPIAVRLPT---GTTVAAVAAGDRHSVALTSAGTV 108
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYM 117
AWG GQLG G T S P+ V +P+G+++ VA G H+L
Sbjct: 109 LAWGRNTEGQLGNGTTTSSGE-------------PVAVSLPSGIRIVAVAVGADHSLALT 155
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G + WG N GQ + T + P V V +AAG H+ VLT
Sbjct: 156 STGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLT 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG S GQLG + LLP VV G +A G +H+ ALTS G AWG
Sbjct: 266 VLAWGGNSHGQLGDGTTT---GSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWG 322
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQLVACG---HSHTLVYMRDG 120
G GQLG G T + P+ V +P G +L++ H + +G
Sbjct: 323 GNHWGQLGNG-------------STSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEG 369
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
WG NS G + +T + P V G + +A G HS L
Sbjct: 370 AALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WG GQLG ++ + P V G+ + +A G H+ ALTS + AWG
Sbjct: 214 LLAWGANREGQLGDGTVVDRSR---PVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWG 270
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQ--LVACGHSHTLVYMRDGK 121
G GQLG G T S +P+ VV P G + +A G H+L DG
Sbjct: 271 GNSHGQLGDGTTTGSL-------------LPVTVVLPVGAEATAIAAGRLHSLALTSDGT 317
Query: 122 IHGWGYNSYGQAANEKSTYAWYP 144
WG N +GQ N ++ + P
Sbjct: 318 ALAWGGNHWGQLGNGSTSDSSEP 340
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLV 115
A+ AWGG GQLG G T S PI V +P G V VA G H++
Sbjct: 55 AILAWGGNDGGQLGDGTTTDSSE-------------PIAVRLPTGTTVAAVAAGDRHSVA 101
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
G + WG N+ GQ N +T + P V G + +A G HS LT SL
Sbjct: 102 LTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSL 160
>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
Length = 1076
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCS--LQSGDKELL-PRRV-VALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG G G+LGH + SG ++ PR+V + L +K +A HT T G
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG + GQLG + ++ R + L + + VA + HT V
Sbjct: 267 VFTWGSNREGQLG---------YTSVDTQPIPRRVSSL--KSKIVAVAAANKHTAVISES 315
Query: 120 GKIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRK-LAAGGGHSAVL 167
G++ WG N GQ +N S Y P V++ G+V K +AA H+ VL
Sbjct: 316 GEVFTWGCNKKGQLGYGTSNSASNYT--PRVVEYLKGKVLKGVAAAKYHTIVL 366
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
++++WG G QLG +G+ + LP +V +L G FIK V+ H+ A++++G +Y
Sbjct: 155 ELFSWGSGVNYQLG-----TGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVY 209
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRDG 120
WG + G+LG P+ F ++ R + + + V+ +A HT+V G
Sbjct: 210 TWGFGRGGRLG-HPE---FDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGG 265
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDA 170
++ WG N GQ P V ++ +AA H+AV++++
Sbjct: 266 EVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISES 315
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++TWG GQLG+ S+ D + +PRRV +L + VA HT ++ G ++ W
Sbjct: 266 EVFTWGSNREGQLGYTSV---DTQPIPRRVSSLKSKIVA-VAAANKHTAVISESGEVFTW 321
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLG G + ++ P + Y + ++ VA HT+V DG+I
Sbjct: 322 GCNKKGQLGYGTSNSASNYTPRVVE-YLKG-------KVLKGVAAAKYHTIVLGADGEIF 373
Query: 124 GWGY 127
WG+
Sbjct: 374 TWGH 377
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,878,708,670
Number of Sequences: 23463169
Number of extensions: 156445164
Number of successful extensions: 446235
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3181
Number of HSP's successfully gapped in prelim test: 1970
Number of HSP's that attempted gapping in prelim test: 388374
Number of HSP's gapped (non-prelim): 28617
length of query: 233
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 95
effective length of database: 9,121,278,045
effective search space: 866521414275
effective search space used: 866521414275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)