BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026784
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I VACG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIDCQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS 312
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + VACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTD 169
G ++ G N GQ +EKS P V + + +A G H+ L D
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALND 101
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+ G S GQLG QS ++ P + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 43 VYSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF+P + I L +Q V+CGH H+L DG +
Sbjct: 100 AGSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFS 150
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 151 WGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG GS GQLG + + +P ++ AL GI I V+CG H+ AL+ G +++WG
Sbjct: 95 VFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGLG +RS + IP + + IP+ VA G +H+ G G
Sbjct: 153 RNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPL-------AQVAAGGTHSFALSLTGTSFG 203
Query: 125 WGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----GGGHSAVLTD 169
WG N GQ A N+ + P +G ++ L+ G H+AVLT+
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG S GQLG ++ + +P++V +L+GI + VA GG H+ AL+ G + WG
Sbjct: 148 VFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205
Query: 65 GCQAGQLGL-GPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
++GQL L G + + + P+ S +N+ ++ + +CG+ HT V +G++
Sbjct: 206 SNRSGQLALSGNKVKEQIYKPH-SIGALKNLSVIYI-------SCGYEHTAVLTEEGQVF 257
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G NS GQ + P ++ G V ++ H+
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ + G S GQLG Q G+ LP + AL+ + + V+CG H+ A+ KG ++AWG
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLG+G + + SF P + T +I I+ V+CGH H+L +D ++
Sbjct: 101 AGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ-------VSCGHYHSLALSKDSQVFS 151
Query: 125 WGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG S GQLG + + P+RV +L+GI + VA GG H+ AL+ G + W
Sbjct: 148 QVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGKI 122
G AGQL L + +P +S+ + + + + N GV ++CG +HT V +DGK+
Sbjct: 206 GSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 164
+G N GQ + P V+ G V ++ G H+
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 312
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + +ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++Y+WG G G+LGH + S D P + AL GI IK +ACG H A+T +G + +
Sbjct: 87 MEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG Q GQLGLG S +P + F I I ++VA G HT DG +
Sbjct: 144 WGRNQNGQLGLGDTED--SLVPQKIQA-FEGIRI-------KMVAAGAEHTAAVTEDGDL 193
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161
+GWG+ YG T P V GE + A G
Sbjct: 194 YGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG 232
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
M ++ +WG GQLG L + L+P+++ A +GI IK VA G HT A+T G L
Sbjct: 137 MEGEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG + G LGLG +T R +P V G + +VACG HT+
Sbjct: 194 YGWGWGRYGNLGLGDRTD-------------RLVPERVTSTGGEKMSMVACGWRHTISVS 240
Query: 118 RDGKIHGWGYNSYGQ 132
G ++ +G++ YGQ
Sbjct: 241 YSGALYTYGWSKYGQ 255
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 7 TWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+WG G GQLGH GD E P ++ ALDG I V CG HT A + G +Y+W
Sbjct: 38 SWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 92
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G + F+ +P ++ R ++ +ACG SH L +G++
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIR----------IKQIACGDSHCLAVTMEGEVQ 142
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG N GQ + + P + G ++ +AAG H+A +T+ L
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G GQLGH L+ L+P ++ AL FI ++ G HT ALTS G LY WG
Sbjct: 245 LYTYGWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK 121
+ GQ+G+G S P+ V P+ ++ V+CG HTL
Sbjct: 302 WNKFGQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNN 348
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVD 148
+ WG + GQ +S +P ++
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
PR+V+ ++ G H+ AL S + +WG + GQLG G D
Sbjct: 14 PRKVLI--------ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-------------DA 52
Query: 90 YFRNIPI-LVVPNGVQLVA--CGHSHTLVYMRDG-KIHGWGYNSYGQAANEKSTYAWYPS 145
R P L +G Q+V+ CG HT+ Y + G +++ WG+ +G+ + S+ + P
Sbjct: 53 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 112
Query: 146 PVDWCVG-EVRKLAAGGGHSAVLT 168
P+ G ++++A G H +T
Sbjct: 113 PIKALHGIRIKQIACGDSHCLAVT 136
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + ++ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A ++G +Y
Sbjct: 278 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVILPHHTHF 350
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT G +GQLGH + K+ P +VVALD I V+CG HT AL KG +YAWG
Sbjct: 55 VYTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
GQLGL +P RNI L VQ VACG+ H+L + ++
Sbjct: 110 LDSDGQLGLVGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFC 160
Query: 125 WGYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG N YGQ +K T P + +G ++AAGG HS VLT
Sbjct: 161 WGQNKYGQLGLGTDCKKQT---SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 4 DIYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+++ WG GQLG C Q+ P+ + +L GI VA GG H+ LT GA+
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+ WG + GQLGL +E+D Y N+ + + + CG HT ++G
Sbjct: 212 FGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ +G YGQ + +++ P V +G V ++A G H++ +
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS 312
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G G GQLGH S E+ PR+V L G + ++ACG HT A S G +Y++
Sbjct: 263 VFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+ WG GQLGLG P +SD + + V+ V CG HT+ + D
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFF--------INKRVRDVGCGLRHTVFVLDD 52
Query: 120 GKIHGWGYNSYGQAANEKS 138
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G+I
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQI 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L S + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + ++ +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHTCALTSKGALYA 62
+I+ G G LG +QS + PRR+ +L G I ++ G G H T+ G ++
Sbjct: 66 EIFVLGTNCSGCLGVGDIQS---TIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG QLG G T + +P T N ++ V ACG H+LV DG++
Sbjct: 123 WGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSDGEV 173
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLTDA 170
WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDT 223
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
IY WG S GQLG +G+K + P VV I+ AC HT A S+G +Y
Sbjct: 278 IYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSF 80
WG C+ GQ + P F
Sbjct: 333 MWGQCR-GQSVILPHLTHF 350
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLGH +L++ EL PR + AL G+ + +VA GG H+ ++ G +Y W
Sbjct: 178 QVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIW 234
Query: 64 GGCQAGQLGL----------------------GPQTRSFSFIPNESDTYF---RNIPILV 98
G ++GQL L G Q + + + + F + P L+
Sbjct: 235 GWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALL 294
Query: 99 -VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 155
+P G V+CG HT V R G+++ WG+ YGQ +E +T +P V++ V +
Sbjct: 295 DLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQL 354
Query: 156 KLAA 159
++ A
Sbjct: 355 QVKA 358
Score = 37.7 bits (86), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 42 KDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
+ + G H L + G +++WGG + GQLG G T P +L
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPR----------LLEALQ 208
Query: 102 GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
G+ + VA G H++ G I+ WG+N GQ A
Sbjct: 209 GLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 243
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLGH +L++ EL PR + AL G+ + VA GG H+ L+ G +Y W
Sbjct: 181 QVFSWGAGRHGQLGHGTLEA---ELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYF-----------------------RNIPILV-V 99
G ++GQL L ++ + + E T + P L+ +
Sbjct: 238 GWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDL 297
Query: 100 PNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EV 154
P G V +CG HT V R G+++ WG+ YGQ ++ ST P V++ V EV
Sbjct: 298 PLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEV 357
Query: 155 RKLAAG 160
R + G
Sbjct: 358 RAVTCG 363
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
+ ++ + G H L + G +++WG + GQLG G T P +L
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG--TLEAELEPR----------LLE 208
Query: 99 VPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAA 134
G+++ VA G H++ G I+ WG+N GQ A
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA 246
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++WG G GQLGH +L++ EL PR + AL G+ + +VA GG H+ ++ G +Y W
Sbjct: 178 QVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIW 234
Query: 64 GGCQAGQLGL----------------------GPQTRSFSFIPNESDTYF---RNIPILV 98
G ++GQL L G Q + + + F + P L+
Sbjct: 235 GWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALL 294
Query: 99 -VPNGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
+P G V +CG HT V R G+++ WG+ YGQ +E +T P V++ V
Sbjct: 295 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 22 QSGDKELLP--RRVVALDGIFIKDVA---------CGGVHTCALTSKGALYAWGGCQAGQ 70
Q+G LLP R V+ F + +A G H L + G +++WGG + GQ
Sbjct: 130 QAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQ 189
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSY 130
LG G T P + LV+ VA G H++ G I+ WG+N
Sbjct: 190 LGHG--TLEAELEPR----LLEALQGLVMAE----VAAGGWHSVCVSETGDIYIWGWNES 239
Query: 131 GQAA 134
GQ A
Sbjct: 240 GQLA 243
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHT 51
++YTWG G GQLGH S D+ PRRV + +K V CG +T
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDR---PRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 51/148 (34%), Gaps = 43/148 (29%)
Query: 4 DIYTWGLGSVGQLGHCSLQ-SGDKELLPRRVVAL--DGIFIK------------------ 42
DIY WG GQL + + D E + R L DG +K
Sbjct: 230 DIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQP 289
Query: 43 --------------DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
+CG HT +T G LY WG + GQLG + S
Sbjct: 290 FPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG---HEDTTSLDRPRRV 346
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVY 116
YF + + V+ V CG +T VY
Sbjct: 347 EYFVDKQLQ-----VKAVTCGPWNTYVY 369
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + +PRRV L + +ACG + A+ G +Y
Sbjct: 172 EVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
WG GQLGLG + + R VQ VACG++HTLV +G++
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAHTLVLTDEGQV 278
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 159
+ WG NSYGQ + YP+PV + ++AA
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + + P RV AL GI ++ VACG HT LT +G +YAW
Sbjct: 225 EVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G N+S+ + + +++ AC +HT + G +
Sbjct: 282 GANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 123 HGWG 126
+ WG
Sbjct: 332 YMWG 335
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHTCALTSKGA 59
+I+ G G LG +QS + PRR+ +L+G K +AC G H T++G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTEGE 119
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
++ WG QLG G T + +P T N ++ V ACG H+LV D
Sbjct: 120 VFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLTSD 170
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 151
G++ WGYN+ GQ + + P V C+
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG S GQLG +G+K + P V I+ AC HT A ++G +Y
Sbjct: 278 VYAWGANSYGQLG-----TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 333 MWGQCR-GQSVILPHLTHFS 351
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LGH + D++ PR++ AL G + ++CG H+ +TS G L+ +
Sbjct: 4102 EVFSWGDGDYGKLGHGN---SDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDG 120
G G+LGLG +T + +P V G Q+ VACG +HTL DG
Sbjct: 4159 GNGDYGRLGLG-------------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG 4205
Query: 121 K-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G YG+ ST P +D G ++K+A G S LT
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT 4255
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
++++WG G G+LGH + + P+ + L G + V+ G H+ A+T G LY
Sbjct: 478 EVFSWGDGDYGKLGHGN---SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGK 121
WG G+LG G D+ RNIP LV + V V+CG SHT+ +DG+
Sbjct: 535 WGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 581
Query: 122 -IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ +G G+ + + + P ++ G +RK+ AG S LT
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G G G+LG L + + P+++ L GI IK VACG + ALT G +Y +G
Sbjct: 4208 VWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
Q +GL P+ R+ + + IP+L GV + VA G HTL +G +
Sbjct: 4265 --QDRLIGL-PEGRA------RNHNRPQQIPVLA---GVIIEDVAVGAEHTLALASNGDV 4312
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+ WG NS GQ + + P+ V G+ VR+++AG HSA T
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
++++G G G+LGH GD + P+ + AL G+FI+ V G + ALTS G +YA
Sbjct: 583 VWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 63 WG-----GCQAGQ-LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
WG GC + + L P+ I + T ++ I G SH L
Sbjct: 638 WGCGACLGCGSSEATALRPK-----LIEELAATRIVDVSI------------GDSHCLAL 680
Query: 117 MRDGKIHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
D +++ WG NS GQ ST P V G +++++AG HS T
Sbjct: 681 SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D+Y WG G GQL ++G ++P + + V CG T + + G + A
Sbjct: 3998 DVYLWGAGRHGQLA----EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLAC 4051
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-------LVACGHS-HTLV 115
G G+LG G N D + +L V + +Q + +CG H++
Sbjct: 4052 GEGSYGRLGQG----------NSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMA 4096
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G++ WG YG+ + S P ++ G EV +++ G HSAV+T
Sbjct: 4097 LTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 9 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HTCALTSKGALYAWGG 65
G GS G+LG + S D +L + AL G + + +CG H+ ALT G +++WG
Sbjct: 4052 GEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 66 CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGW 125
G+LG G R R I L VQ+ +CG H+ V DGK+ +
Sbjct: 4109 GDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLFTF 4158
Query: 126 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLT 168
G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG S QL G +E + + +A + + G T +++ G++ A
Sbjct: 373 EVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 64 GGCQAGQLGLGPQT-----RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
G G+LGLG + +F P+ R+I + G HTL +
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPH------RSIKKVSSSKG------SDGHTLAFTT 475
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLTD 169
+G++ WG YG+ + S+ YP + + G+V ++AG HSA +T+
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHT---CALTSKGAL 60
++Y WG S+GQ G + S P++V LDGI I+ ++ G H+ AL +
Sbjct: 685 EVYAWGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQV 742
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN 101
AW L + SF+ D IP L P+
Sbjct: 743 VAWHRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPS 783
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTS 56
D+Y WG S GQLG L + P V L G ++ ++ G H+ A T+
Sbjct: 4311 DVYAWGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G N + + + +L+ +Q VACG + TL +G +
Sbjct: 3126 LGEYGRLGHG---------DNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3175
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 572 ELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKD 676
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3120 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3295 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4118 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4168 VWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4225 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4266
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 516 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 571 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 617
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 618 TLAVTENGQVWSWGDGDYGK 637
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4220 VYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4277 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4318
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4087
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4088 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4140 EALQGHRVIDIACGSGDAQTL 4160
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 627 VWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 684 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
Y+ G G+LGLG + + IP + + V V G H DG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3067
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4319 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 536
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTL 619
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3956 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4011
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4012 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4064
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT GL + GQLGH + G+K P ++ AL I VACG H+ AL+ +G L++W
Sbjct: 54 EVYTCGLNTKGQLGH--EREGNK---PEQIGALADQHIIHVACGESHSLALSDRGQLFSW 108
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLGL S + +P R I L +Q V+CG+ H L DG+
Sbjct: 109 GAGSDGQLGLMTTEDSVA-VP-------RLIQKLNQQTILQ-VSCGNWHCLALAADGQFF 159
Query: 124 GWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLT 168
WG NS+GQ K + P V G + ++AAGG HS L+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S GQLG + + P+RV +L+GI + VA GG H+ AL+ GA++ W
Sbjct: 157 QFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G AGQLGL + ES + + L+ V ++CG HT V + G +
Sbjct: 215 GMNNAGQLGLSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
+G S GQ ++ P V +G EV ++A G H+ + L
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALT-SKGALYAW 63
++T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG HT A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 64 GGCQAGQLGLG 74
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG+ + GQLG D+E P V L + ++CG HT LT G ++ +G
Sbjct: 211 VFGWGMNNAGQLGLSD--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGKIH 123
GQLG N+ R + ++ + V +ACG HTL ++ G I+
Sbjct: 268 AGSCGQLGHDSM--------NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 124 GWGYNSYGQAANEKSTYAWYPSPV 147
+G + GQ + PSPV
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPV 341
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 8 WGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC 66
WG S+GQ G +LQ E P+ + +K+VACGG H+ L G +Y G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE--PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 67 QAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
GQLG + I +D + + VACG SH+L G++ WG
Sbjct: 62 TKGQLGHEREGNKPEQIGALADQHIIH------------VACGESHSLALSDRGQLFSWG 109
Query: 127 YNSYGQ 132
S GQ
Sbjct: 110 AGSDGQ 115
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 161
V+ VACG +H++ + DG+++ G N+ GQ +E+ P + + + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGE 93
Query: 162 GHSAVLTD 169
HS L+D
Sbjct: 94 SHSLALSD 101
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH S + DK PR + AL I+D+ACG H+ ALTS G LY WG
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGKI 122
+ G+LG G T + + +L+ +Q VACG + TL +G +
Sbjct: 3125 LGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLV 3174
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
WG +G+ S P ++ G+ V ++ G S LT +
Sbjct: 3175 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++YTWG G+ G+LGH S + E +P V L G+ + DVACG T A+T G ++
Sbjct: 571 ELYTWGRGNYGRLGHGS---SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 62 AWGGCQAGQLGLGPQT--RSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+WG G+LG G ++ I D V V CG ++ +D
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKD 675
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
G+++ WG + + + YP ++ G +V +AAG H LT+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 52/212 (24%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V L G + VACG T ALT +G
Sbjct: 3119 ELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 60 LYAWGGCQAGQLGLG-------PQT---------------RSFSFIPNE----------- 86
+++WG G+LG G PQ FS +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 87 -------SDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEK 137
SD + R ++ G ++ VA G H L G+++ WG N +GQ N
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 138 STYAWYPSPVDWCVGE-VRKLAAGGGHSAVLT 168
+T P+ V G+ + ++A G HS T
Sbjct: 3294 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G+LGH + D+ PR + +L GI + DVA GG H+ +T+ G LY W
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMR 118
G + G+LG SD+ + P LV + V +ACG + TL
Sbjct: 4116 GKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
D + WG YG+ S P +D G V K+ G S LT +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI----FIKDVACGGVHTCALTSK 57
++Y+WG G G+LGH GD L P+ + A G + +ACG ++ A+T++
Sbjct: 515 EVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 58 GALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV-PNGVQL--VACGH--SH 112
G LY WG G+LG G + IP+LV G+++ VACG +
Sbjct: 570 GELYTWGRGNYGRLGHG-------------SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 616
Query: 113 TLVYMRDGKIHGWGYNSYGQ 132
TL +G++ WG YG+
Sbjct: 617 TLAVTENGQVWSWGDGDYGK 636
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D +P ++ +L G+ + V CG + ALT GA+Y WG
Sbjct: 4166 VWSWGDGDYGKLGRGG---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVY 116
+LG G SD + R P VQ +A G H +
Sbjct: 4223 KGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCC 4264
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
DG+++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G +LGH S D PR+V L G + +A G +H T G +Y WG
Sbjct: 4218 VYTWGKGDYHRLGHGS---DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 116
GQLG G T P LV V VACG +HTL +
Sbjct: 4275 DNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAW 4316
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 30 PRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P + ++ +FIK VA GG H AL+S+G +Y+WG + G+LG G RS P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVI 4085
Query: 88 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
++ R I ++ VA G +H+ G ++ WG YG+ + S P V
Sbjct: 4086 ES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 148 DWCVG-EVRKLAAGGGHSAVL 167
+ G V +A G G + L
Sbjct: 4138 EALQGHRVVDIACGSGDAQTL 4158
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG D P+ + L + + V CG + ALT G +Y+WG
Sbjct: 626 VWSWGDGDYGKLGRGG---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G ++ + R +L G ++ VA G +H L D ++
Sbjct: 683 KGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 123 HGWGYNSYGQ 132
H WG N Q
Sbjct: 731 HSWGSNDQCQ 740
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
+ ++ WGL QLG G K +P L + + VA G A+T +G +
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3013
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
YA G G+LGLG + + IP + + V V G H DG
Sbjct: 3014 YACGEATNGRLGLGISSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDG 3066
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
K+ WG G+ + P ++ +R +A G HSA LT + L
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3120
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YTWG GQLG + + + PR V AL G + VACG HT AW
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAW 4316
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL 97
+ G P + +P E + + + IPI+
Sbjct: 4317 STSKPASAGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 28 LLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPN 85
L P+ V L I +A G H AL + G +Y+WG G+LG G +P
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPL 535
Query: 86 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPS 145
E V +ACG +++ +G+++ WG +YG+ + S P
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Query: 146 PVDWCVG-EVRKLAAGGGHSAVL 167
V G +V +A G G + L
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTL 618
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
IY WG GQLG G K +P AL + + G A+T+ G LYA
Sbjct: 3954 IYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA-T 4009
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G AG T S S + T +I + + V G H L +G+++
Sbjct: 4010 GYGAGGRLGIGGTESVS-----TPTLLESIQHVFIKKVA--VNSGGKHCLALSSEGEVYS 4062
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSL 173
WG G+ + + P ++ G EV +AAGG HSA +T A L
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LGH + + DK PR V AL I+DVACG H+ A++S+G LY WG
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDK---PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3150
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGH--SHTLVYMRD 119
+ G+LG G T P LV V VACG + TL D
Sbjct: 3151 LGEYGRLGHGDNTTQLK-------------PKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G + WG +G+ S + P ++ G V ++ G S LT A
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 3249
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHTCALTSKGA 59
++YTWGLG G+LGH GD +L P+ V AL G + VACG T ALT GA
Sbjct: 3145 ELYTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 3199
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
+++WG G+LG G S + P+E + I GV + CG +L R
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRA 3249
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDA 170
G++ WG Y + + + P P+ G V +A G H +TDA
Sbjct: 3250 GEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3301
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G G+LGH + S D+ P+ V L+G+ + D+ACG H+ A+T+ G + W
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGK 121
G + G+LG G E+ +R I I ACG + TL D
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDI----------ACGSGDAQTLCITDDDN 4262
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
+ WG YG+ S P ++ G V K+ G S LT +
Sbjct: 4263 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 4312
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHTCALTSKGALY 61
++ TWG G+ +LGH + D LP VVAL + DVA G H+ ALTS+G ++
Sbjct: 688 NLLTWGRGTYARLGHGN---SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRD 119
AWG G+LG G S PILV +P VQ V G ++ +
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQRVFAGSQFSVALSSE 790
Query: 120 GKIHGWG 126
G+++ WG
Sbjct: 791 GQLYTWG 797
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHTCALTSKGALY 61
+ Y+WG G +LGH GD +P ++ AL+ ++ V CG ++ A+T G L
Sbjct: 636 NAYSWGTGEDHRLGH-----GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 690
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVY 116
WG +LG G N D R++P LVV +V G +H+L
Sbjct: 691 TWGRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+G + WG YG+ N + P V+ + V+++ AG S L+
Sbjct: 738 TSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSVALS 788
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++++WG G G+LG D LP ++ +L G+ + V CG + ALT GA+Y W
Sbjct: 4262 NVWSWGDGDYGKLGRGG---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTW 4318
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGK 121
G +LG G S + R + G ++ +A G H + G+
Sbjct: 4319 GKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
++ WG N GQ + T P V G+ + K+ G H+ L+ +
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3251 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3306
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 116
WG GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3307 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3350
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYA 62
+Y G G+ G+LG L LP ++ L +K VA GG H ALT G +++
Sbjct: 3040 VYACGEGTNGRLG---LGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFS 3096
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 119
WG + G+LG G +T + P LV ++ VACG SH+
Sbjct: 3097 WGEGEDGKLGHGNRTT-------------LDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3143
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
G+++ WG YG+ + +T P V G V ++A G + L
Sbjct: 3144 GELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 25 DKELLPRRVVALDGIFIKDVAC--GGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82
D +P + +L +F+K VA GG H ALT++G +YAWG + G+LG G +
Sbjct: 4120 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM----- 4174
Query: 83 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST 139
+Y R P LV NG+ + +ACG +H+ G + WG YG+ + S
Sbjct: 4175 ------SYDR--PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSE 4226
Query: 140 YAWYPSPVDWCVG-EVRKLAAGGGHSAVL 167
P V+ +G +A G G + L
Sbjct: 4227 DQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG G G+LG + D P + L GI + + CG + ALT G ++ WG
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGKI 122
+LG G D + R + G ++ VA G H L G++
Sbjct: 3257 KGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Query: 123 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 164
+ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3305 YAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3347
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 10 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA-CGGVHTCALTSKGALYAWGGCQA 68
L G+L L + E LP VA D +FI C G H A+ S Y+WG +
Sbjct: 587 LSQEGKLYTWRLAKPEAEPLPMEEVAHD-VFISIAGHCEGRHFLAIDSNHNAYSWGTGED 645
Query: 69 GQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGW 125
+LG G DT+ R +P + + VQ V CG S++ G + W
Sbjct: 646 HRLGHG-------------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 692
Query: 126 GYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLT 168
G +Y + + S P+ V D V +V L +G HS LT
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-ALGSGDAHSLALT 738
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 12/165 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+ WGL QLG G K +P + + +A G ++ G +YA G
Sbjct: 2988 VMVWGLNDKEQLGGLK---GSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACG 3044
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G+LGLG +P++ + + V V G H L DGK+
Sbjct: 3045 EGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVA------VHSGGKHALALTLDGKVFS 3096
Query: 125 WGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLT 168
WG G+ + T P V+ ++R +A G HSA ++
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YTWG + LGH ++ + +PR V +L I DVA H AL+S G ++
Sbjct: 792 QLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV-VPN-GVQLVACGHSHTLVYMR 118
WG + Q + P + S S+ R PILV +P +AC + +LV+ +
Sbjct: 850 WGRNDSQQ--ICPASVS-------SEPLLRT-PILVSLPTFPASGIACTSAQSLVWTQ 897
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+IY+WG GQLG +S D P + LD ++ VACGG H+ LT G L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD- 119
G + GQLG N + R P LV V V +ACG HTL Y+ D
Sbjct: 268 GAGKHGQLG-----------HNSTQNELR--PCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVL 167
GK+ +G GQ N + P PV E KL AGG S +L
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILL 373
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG GQLG + P+ V L G+ + ++ G H+ AL+ G +Y+W
Sbjct: 158 ELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 120
G + GQLGLG T ++ P L+ V+ VACG SH+ + +DG
Sbjct: 216 GKNECGQLGLG-------------HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 121 KIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 164
+ +G +GQ + + P V VG V ++A G H+
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I + CG H+ AL+ G L+AWG GQLG+G R P P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-----------------RKFPSTTTP 182
Query: 101 N------GVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 152
GV L ++ G +H++ G I+ WG N GQ + PS ++
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN 242
Query: 153 E-VRKLAAGGGHSAVLTD 169
+ V +A GG HSA+LT
Sbjct: 243 QKVEFVACGGSHSALLTQ 260
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+++WG GQLGH ++ D +P+ + +L G ACG HT ALT G++YA+G
Sbjct: 162 LWSWGRNDKGQLGHGDIKRID---VPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFG 218
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
+ GQLGLG +T + +P+ + + PI VACG +++ G ++
Sbjct: 219 ENKMGQLGLGNKTDA---VPSPAQILYNGQPITK-------VACGAEFSMIMDCKGNLYS 268
Query: 125 WGYNSYGQ 132
+G YGQ
Sbjct: 269 FGCPEYGQ 276
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L G+ ++ VA G H+ +T +G L++WG GQLG G
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG------------- 176
Query: 88 DTYFRNIPILVVP-NGVQLV--ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
D ++P L+ G V ACG +HTL +G ++ +G N GQ T A P
Sbjct: 177 DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VP 235
Query: 145 SPVDWCVG--EVRKLAAGGGHSAVL 167
SP + K+A G S ++
Sbjct: 236 SPAQILYNGQPITKVACGAEFSMIM 260
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G +GQLG + D P +++ +G I VACG + + KG LY++G
Sbjct: 214 VYAFGENKMGQLGLGN--KTDAVPSPAQIL-YNGQPITKVACGAEFSMIMDCKGNLYSFG 270
Query: 65 GCQAGQLGL---GPQTRSFSFIPNESDTYFRNIPILV----------VPN-GVQLVACGH 110
+ GQLG G I + + R I I + VPN V+ +ACG
Sbjct: 271 CPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGI 330
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+H+L+ ++ WG+ YG+
Sbjct: 331 NHSLILDSQKRVFSWGFGGYGR 352
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+ RR+ + + + ++
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVR 324
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
D+ACG H+ L S+ +++WG G+LG Q +P R + + P
Sbjct: 325 DIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--EMVP-------RLVKLFDFPGR 375
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + G + + G + WG A N YP V D C +VR LA G
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACG 429
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 430 KSSIIVAADESTI 442
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 103 VQLVACGH--SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA- 159
V+ VA G +H+L+ +GK+ WG N GQ + P ++ GEV AA
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 160 GGGHSAVLTDACSLKELCEFRLAE 183
G H+ LT+ S+ E ++ +
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQ 224
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 49/158 (31%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
+++WG G G+LGH + E++PR V D G + G + A++ G L+
Sbjct: 342 VFSWGFGGYGRLGHSEQRD---EMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398
Query: 63 WGG--------------------------CQAGQLGLGPQTRSFSFIPN----------- 85
WG C + + + S+ P+
Sbjct: 399 WGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDN 458
Query: 86 --ESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRD 119
+S T + + L +G+ V G+SHTLV RD
Sbjct: 459 KAKSSTTAQEVKTL---DGIYSDQVIMGNSHTLVVARD 493
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 67.8 bits (164), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+GLG GQLG + + +P+ + + I +ACG HT +T G +Y +G
Sbjct: 263 VYTFGLGQFGQLGLGTFLF--ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ G+LGLG + + FIP + R I VQLV+CG HTLV+
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHTLVF 364
Score = 62.8 bits (151), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 25/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG S + K P V AL +K ACG HT T G +YA G
Sbjct: 56 LYMFGSNNWGQLGLGSKSTVSK---PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E + F I ++ ++ G + + DG++
Sbjct: 113 GNNEGQLGLG---------DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFM 163
Query: 125 WGYNSYGQAANEKSTYAWYPS------PVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ E T P P+ W ++ G HSA +T
Sbjct: 164 WGDNSEGQIGLENVTNVCVPQQVTVGKPISW-------ISCGYYHSAFVT 206
Score = 58.2 bits (139), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG S GQ+G L++ +P++V G I ++CG H+ +T++G LY +
Sbjct: 160 ELFMWGDNSEGQIG---LENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTF 214
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + G+LGL Q +P P+ +P V VACG HT+V + + ++
Sbjct: 215 GEPECGKLGLPNQLLVNHRMPQ---------PVPGIPGKVVQVACGGGHTVV-LTEKAVY 264
Query: 124 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK-----LAAGGGHSAVLTD 169
+G +GQ T+ + + V + ++ +A G H+A++TD
Sbjct: 265 TFGLGQFGQLG--LGTFL-FETSVPKAIEHIKDQKISFIACGENHTALITD 312
Score = 58.2 bits (139), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T LY +G GQLGLG ++ T + + P V
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTV------SKPTCVKALK----PEKV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTY---AWYPSPVDWCVGEVRK 156
+ ACG +HTLV GK++ G N+ GQ E+ST+ +++ S ++++
Sbjct: 90 KFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQ-----RKIKQ 144
Query: 157 LAAGGGHSAVLTD 169
L+AG SA LT+
Sbjct: 145 LSAGSNTSAALTE 157
Score = 51.6 bits (122), Expect = 5e-06, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G G+LG + Q +P+ V + G ++ VACGG HT LT K A+Y +G
Sbjct: 211 LYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AVYTFG 267
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
Q GQLGLG +F F +T + + +ACG +HT + G ++
Sbjct: 268 LGQFGQLGLG----TFLF-----ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 125 WGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL-------TDACSLK 174
+G +G+ E ST + P+ ++ V+ ++ GG H+ V T+ LK
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPRLGGTEEMELK 378
Query: 175 EL 176
E+
Sbjct: 379 EI 380
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL G+ + + CG HT ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGK 121
G GQLG G + S P + I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQGGH 306
Query: 122 IHGWG 126
++ WG
Sbjct: 307 VYMWG 311
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHTCALTSKGALYA 62
+++ WG + GQ+G S + + PR+V L + ++ACG + A+ G +Y
Sbjct: 148 ELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 204
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD 119
WG GQLGLG + P+ V V + CG++HTL +
Sbjct: 205 WGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCGYAHTLALTDE 251
Query: 120 GKIHGWGYNSYGQ 132
G ++ WG N+YGQ
Sbjct: 252 GLLYAWGANTYGQ 264
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 27/176 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + L+P+++ AL G IK ++ G G H T G +
Sbjct: 42 EVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVV 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
YAWG QLG G + + P+ V N V VACG H++
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIA-------------PVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLTDA 170
DG++ WGYN+ GQ + + P V C+ V +A G S + D+
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDS 199
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LYAW 63
+Y WG + GQLG S + L P +++ I+ AC HT A ++G +Y W
Sbjct: 254 LYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 310
Query: 64 GGCQAGQLGLGPQTRSF 80
G C+ GQ + P F
Sbjct: 311 GQCR-GQSVILPHLTHF 326
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG GQLGH GD + + PR + L I ACG HT ALT G+++A
Sbjct: 171 LWSWGRNEKGQLGH-----GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFA 225
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+G + GQLGLG QT + +P+ + + PI +ACG +++ G +
Sbjct: 226 FGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITK-------MACGAEFSMIMDCKGNL 275
Query: 123 HGWGYNSYGQ 132
+ +G YGQ
Sbjct: 276 YSFGCPEYGQ 285
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+PRRV + + + ++
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 333
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
DVACG HT L S+ +++WG G+LG Q + + R + + P
Sbjct: 334 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ---------KDEMVPRLVKLFDFPGR 384
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + G++ + G + WG A N YP V D C +R LA G
Sbjct: 385 GASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACG 438
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 439 KSSIIVAADESTI 451
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G +GQLG L + + + +G I +ACG + + KG LY++G
Sbjct: 223 VFAFGENKMGQLG---LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFG 279
Query: 65 GCQAGQLGLGPQTRSFS----------FIPNESDTYFRNIP---ILVVPN-GVQLVACGH 110
+ GQLG + + +P + IL VPN V+ VACG
Sbjct: 280 CPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGA 339
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+HTLV ++ WG+ YG+
Sbjct: 340 NHTLVLDSQKRVFSWGFGGYGR 361
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 21/145 (14%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L G+ ++ V G H+ +T++G L++WG + GQLG G
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG------------- 185
Query: 88 DTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
DT P L+ +++ ACG +HTL G + +G N GQ T A P
Sbjct: 186 DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDA-VP 244
Query: 145 SP--VDWCVGEVRKLAAGGGHSAVL 167
SP + + + K+A G S ++
Sbjct: 245 SPAQIMYNGQPITKMACGAEFSMIM 269
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 49/158 (31%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
+++WG G G+LGH + E++PR V D G + G + A++ G L+
Sbjct: 351 VFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFF 407
Query: 63 WGG--------------------------CQAGQLGLGPQTRSFSFIPN----------- 85
WG C + + + S+ P+
Sbjct: 408 WGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH 467
Query: 86 --ESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRD 119
+S T + + L +G+ + VA G+SH+LV RD
Sbjct: 468 KPKSSTAAQEVKTL---DGIFSEQVAMGYSHSLVIARD 502
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 64.3 bits (155), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG L S + P + AL +K ACG HT T G +YA G
Sbjct: 56 LYMFGSNNWGQLG---LGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG ++ DT F I + ++ ++ G + + DGK+
Sbjct: 113 GNNEGQLGLGDT--------DDRDT-FHQIVFFTPADTIKQLSAGANTSAALTEDGKLFM 163
Query: 125 WGYNSYGQAANEKSTYAWYP------SPVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ E + P P+ W ++ G HSA +T
Sbjct: 164 WGDNSEGQIGLEDKSNVCIPHEVTVGKPISW-------ISCGYYHSAFVT 206
Score = 60.8 bits (146), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +GLG GQLG + E P+ + + I ++CG HT +T G LY +G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSE--PKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ G+LGLG + + F P + R VQL+ACG H LV+
Sbjct: 321 DGRHGKLGLGMENFTNQFFPTLCSNFLR--------FAVQLIACGGCHMLVF 364
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG HT +T LY +G GQLGLG + T + + P V
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII------KPTCIKALK----PEKV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTYAW--YPSPVDWCVGEVRKL 157
+L ACG +HTLV G ++ G N+ GQ +++ T+ + +P D +++L
Sbjct: 90 KLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD----TIKQL 145
Query: 158 AAGGGHSAVLTD 169
+AG SA LT+
Sbjct: 146 SAGANTSAALTE 157
Score = 53.9 bits (128), Expect = 8e-07, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGGVHTCALT 55
M ++YT+G G+LG ELL P+RV+ + I+ VACGG HT LT
Sbjct: 207 MDGELYTFGEPENGKLGL------PNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT 259
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 115
K +YA+G Q GQLGLG +F F +E R + + ++CG +HT +
Sbjct: 260 EK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKICHISCGENHTAL 309
Query: 116 YMRDGKIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 167
G ++ +G +G+ E T ++P+ ++ V+ +A GG H V
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQ+G L+ +P V G I ++CG H+ +T G LY +G
Sbjct: 161 LFMWGDNSEGQIG---LEDKSNVCIPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIP-ILVVPNGVQLVACGHSHTLVYMRDGKIH 123
+ G+LGL PNE R+ +L +P V VACG HT+V + + ++
Sbjct: 216 EPENGKLGL----------PNELLMNHRSPQRVLGIPERVIQVACGGGHTVV-LTEKVVY 264
Query: 124 GWGYNSYGQ 132
+G +GQ
Sbjct: 265 AFGLGQFGQ 273
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG GQLGH GD + + PR + AL I ACG HT ALT G+++A
Sbjct: 169 LWSWGRNEKGQLGH-----GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFA 223
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+G + GQLGLG QT + +P+ + + PI +ACG +++ G +
Sbjct: 224 FGENKMGQLGLGNQTDA---VPSPAQIMYNGQPITK-------MACGAEFSMLMDCKGNL 273
Query: 123 HGWGYNSYGQ 132
+ +G YGQ
Sbjct: 274 YSFGCPEYGQ 283
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+PRRV + + + ++
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 331
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
DVACG HT L S+ +++WG G+LG Q + + R + + P
Sbjct: 332 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ---------KDEMVPRLVKLFDFPGR 382
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + G++ + G + WG A N YP V D C +R LA G
Sbjct: 383 GATQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACG 436
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 437 KSSIIVAADESTI 449
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L G+ ++ V G H+ +T++G L++WG + GQLG G
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG------------- 183
Query: 88 DTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYP 144
DT P L+ + L ACG +HTL G + +G N GQ T A P
Sbjct: 184 DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDA-VP 242
Query: 145 SPVDWCVG--EVRKLAAGGGHSAVL 167
SP + K+A G S ++
Sbjct: 243 SPAQIMYNGQPITKMACGAEFSMLM 267
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ +G +GQLG L + + + +G I +ACG + + KG LY++G
Sbjct: 221 VFAFGENKMGQLG---LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFG 277
Query: 65 GCQAGQLGLGPQTRSFS----------FIPNESDTYFRNIP---ILVVPN-GVQLVACGH 110
+ GQLG + + +P + IL VPN V+ VACG
Sbjct: 278 CPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGA 337
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+HTLV ++ WG+ YG+
Sbjct: 338 NHTLVLDSQKRVFSWGFGGYGR 359
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 49/158 (31%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHTCALTSKGALYA 62
+++WG G G+LGH + E++PR V D G + G + A++ G L+
Sbjct: 349 VFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFF 405
Query: 63 WGG--------------------------CQAGQLGLGPQTRSFSFIPN----------- 85
WG C + + + S+ P+
Sbjct: 406 WGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH 465
Query: 86 --ESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRD 119
+S T + + L +G+ + VA G+SH+LV RD
Sbjct: 466 KPKSSTAAQEVKTL---DGIFSEQVAMGYSHSLVIARD 500
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG GQLG L + +L P RV AL + + + CG HT ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGKI 122
G GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 123 HGWG 126
+ WG
Sbjct: 308 YMWG 311
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVHTCALTSKGAL 60
+++ WG + GQ+G S + + PR+V + + IK V ACG + A+ G +
Sbjct: 148 EVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 117
Y WG GQLGLG + P+ V V + CG++HTL
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 118 RDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
+G ++ WG N+YGQ SP V + R + HSA
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHTCALTSKGAL 60
+++ +GL LG +GD + L+P+++ L G IK ++ G G H T G +
Sbjct: 42 EVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVV 96
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVY 116
YAWG QLG G + + P+ V N V VACG H++
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIA-------------PVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLTD 169
DG++ WGYN+ GQ + + P V C + V +A G S + D
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD 198
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGA-LY 61
+Y WG + GQLG +G+K L P ++ ++ AC HT A ++G +Y
Sbjct: 254 LYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 62 AWGGCQAGQLGLGPQTRSFS 81
WG C+ GQ + P FS
Sbjct: 309 MWGQCR-GQSVILPHLTHFS 327
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
+Y WGL Q C ++ D+E P V AL+G +K + G HT AL G
Sbjct: 300 VYAWGLNITRQ---CGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGR 356
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNES-DTYFRNIPILV--VPNGVQLVACGHSHTLVY 116
+ AWG QLG+ + + +E + Y+ + P ++ + N +Q+V CG H L
Sbjct: 357 VLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVV-CGTHHNLAV 415
Query: 117 MRDGKIHGWG 126
DGK++ WG
Sbjct: 416 TSDGKVYSWG 425
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G QLG L+ + L + +AL I V G H+ A+ +KG +YAWG
Sbjct: 247 VYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNII--SVGAGSYHSFAIDNKGRVYAWG 304
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGK 121
Q G+ + +E + P LV V+ + G HTL + DG+
Sbjct: 305 LNITRQCGI--------EVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGR 356
Query: 122 IHGWGYNSYGQ 132
+ WG + Q
Sbjct: 357 VLAWGRDDRHQ 367
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 11/69 (15%)
Query: 2 HLDIYTWGLGSVGQLGHCSLQSGDKEL----LPR--RVVALDGIFIKDVACGGVHTCALT 55
L++Y +G GS+ +LG G++E+ PR +++ D + + D+A GG+H+ AL+
Sbjct: 70 RLNVYVFGSGSMNELGM-----GEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALS 124
Query: 56 SKGALYAWG 64
G +Y WG
Sbjct: 125 HDGRVYTWG 133
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 62/167 (37%), Gaps = 25/167 (14%)
Query: 6 YTWGLG--SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+TWG S G LG+ Q E R+ I +A G H ALT+ G +Y W
Sbjct: 196 FTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE-----ICQLATGTDHIIALTTTGKVYTW 250
Query: 64 GGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G Q QLG + + R P L + N + V G H+ G+
Sbjct: 251 GNGQQFQLGRRMLERRRLQGLTPQP----------LALKNIIS-VGAGSYHSFAIDNKGR 299
Query: 122 IHGWGYNSYGQAA-----NEKSTYAWYPSPVDWCVGEVRKLAAGGGH 163
++ WG N Q E+ P+ VD G K GG H
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEH 346
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
V CG H A+TS G +Y+WG + ++G G N+ D +P LV +
Sbjct: 405 VVCGTHHNLAVTSDGKVYSWGSAENYEVGQG---------DNDEDVA---VPTLVRSKAI 452
Query: 104 QLVAC 108
+ VA
Sbjct: 453 KEVAI 457
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 4 DIYTW-----GLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTS 56
++YTW G GQLGH GDK P+ V L G I+ V+CG T +T
Sbjct: 389 ELYTWVNMQGGTKLHGQLGH-----GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+G LYA+G G +G+ P + + + N V+ V+CG +H +V
Sbjct: 444 EGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSN--------PVEQVSCGDNHVVVL 495
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
R+ +++ WG YG+ + + P VD
Sbjct: 496 TRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVD 527
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 56/144 (38%), Gaps = 30/144 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LG L S + P++V + I V CG T LT G + A
Sbjct: 500 EVYSWGCGEYGRLG---LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 64 GGCQAGQLGLG---------------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
G + +LGL P T SF+ S R I A
Sbjct: 557 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI------------AP 604
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQ 132
G +HT G++ +G N GQ
Sbjct: 605 GKTHTAAIDERGRLLTFGCNKCGQ 628
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 22/139 (15%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I+ +A G HT A+ +G L +G + GQLG+G + I +L P
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL------------GINLLGGP 646
Query: 101 NG---VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY-------AWYPSPVDWC 150
G V V+CG T+ D I WG G+ A + +P P+
Sbjct: 647 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGS 706
Query: 151 VGEVRKLAAGGGHSAVLTD 169
+ V L+ G H+ ++ +
Sbjct: 707 LHHVPDLSCRGWHTILIVE 725
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 62.4 bits (150), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+GLG GQLG + E P+ + + I ++CG HT +T G +Y +G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+ G+LGLG + + FIP + R I V+LVACG H +V+
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 71/170 (41%), Gaps = 25/170 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y +G + GQLG S + K P V AL +K ACG HT T G +YA G
Sbjct: 56 LYMFGSNNWGQLGLGSKSAISK---PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATG 112
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
G GQLGLG E F I + ++ ++ G + + DG++
Sbjct: 113 GNNEGQLGLG---------DTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFM 163
Query: 125 WGYNSYGQAANEKSTYAWYPS------PVDWCVGEVRKLAAGGGHSAVLT 168
WG NS GQ + + P PV W ++ G HSA +T
Sbjct: 164 WGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-------ISCGYYHSAFVT 206
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 44 VACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV 103
++CG H+ +T LY +G GQLGLG ++ T + + P V
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAI------SKPTCVKALK----PEKV 89
Query: 104 QLVACGHSHTLVYMRDGKIHGWGYNSYGQAA----NEKSTY---AWYPSPVDWCVGEVRK 156
+L ACG +HTLV G ++ G N+ GQ E++T+ +++ S ++++
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSE-----HKIKQ 144
Query: 157 LAAGGGHSAVLTD 169
L+AG SA LT+
Sbjct: 145 LSAGSNTSAALTE 157
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
++ WG S GQ+G L++ +P++V G + ++CG H+ +T+ G LY +G
Sbjct: 161 LFMWGDNSEGQIG---LKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFG 215
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGKI 122
+ G+LGL PN+ R P LV +P V VACG HT+V + + +
Sbjct: 216 EPENGKLGL----------PNQLLGNHRT-PQLVSEIPEKVIQVACGGEHTVV-LTENAV 263
Query: 123 HGWGYNSYGQ 132
+ +G +GQ
Sbjct: 264 YTFGLGQFGQ 273
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y +G G+LG + G+ P+ V + I+ VACGG HT LT + A+Y +
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRT-PQLVSEIPEKVIQ-VACGGEHTVVLT-ENAVYTF 266
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G Q GQLGLG +F F +E NI + ++CG +HT + G ++
Sbjct: 267 GLGQFGQLGLG----TFLFETSEPKV-IENIR----DQTISYISCGENHTALITDIGLMY 317
Query: 124 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGG 162
+G +G+ E T + P+ + + KL A GG
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGG 358
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 4 DIYTW-----GLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTS 56
++YTW G GQLGH GDK P+ V L G I V+CG T +T
Sbjct: 389 ELYTWVNMQGGTKLHGQLGH-----GDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
+G LYA+G G +G+ + P + + + N V+ V+CG +H +V
Sbjct: 444 EGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN--------PVEQVSCGDNHVVVL 495
Query: 117 MRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
R+ +++ WG YG+ + + P VD
Sbjct: 496 TRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVD 527
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 56/144 (38%), Gaps = 30/144 (20%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y+WG G G+LG L S + P+RV + I V CG T LT G + A
Sbjct: 500 EVYSWGCGEYGRLG---LDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLAC 556
Query: 64 GGCQAGQLGLG---------------PQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
G + +LGL P T SF+ S R I A
Sbjct: 557 GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTI------------AP 604
Query: 109 GHSHTLVYMRDGKIHGWGYNSYGQ 132
G +HT G++ +G N GQ
Sbjct: 605 GKTHTAAIDERGRLLTFGCNKCGQ 628
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 22/139 (15%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I+ +A G HT A+ +G L +G + GQLG+G + I +L P
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL------------GINLLGGP 646
Query: 101 NG---VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY-------AWYPSPVDWC 150
G V V+CG T+ D I WG G+ A + +P P+
Sbjct: 647 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGS 706
Query: 151 VGEVRKLAAGGGHSAVLTD 169
+ V L+ G H+ ++ +
Sbjct: 707 LHHVPDLSCRGWHTILIVE 725
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 32/173 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG G K + V G + V G H +T + LY W
Sbjct: 348 EVYVWG--------------GGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 393
Query: 64 GGCQA-----GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
Q GQLG G + P + + + V+CG T+
Sbjct: 394 VNMQGGTKLHGQLGHGDKASYRQ--PKHVEK--------LQGKAIHQVSCGDDFTVCVTD 443
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLT 168
+G+++ +G + YG +K + P+ + V +++ G H VLT
Sbjct: 444 EGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLT 496
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
++T+G G G+LG G++ LL P+ V +L G FI D++ GG H+ LT+KG +
Sbjct: 359 LFTFGRGDHGRLG-----LGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLV 413
Query: 61 YAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120
+++G GQLG+G + + IP + + + P + V+ G H++ +
Sbjct: 414 FSFGRNDQGQLGIGCFSNQQT-IPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNN 472
Query: 121 KIHGWGYNSYG 131
+ WG + YG
Sbjct: 473 DTYAWGRSDYG 483
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G G +G+LGH +L+S L + + +A GG H+ ALT G +Y+W
Sbjct: 208 NLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSW 267
Query: 64 GGCQAGQLGLG 74
GG + QLGLG
Sbjct: 268 GGNDSCQLGLG 278
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 29/149 (19%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG--------IFIKDVACGGVHTCALTS 56
++++G GQLG +++ +P+++ I I V+ GG H+ A++
Sbjct: 413 VFSFGRNDQGQLGIGCFS--NQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD 470
Query: 57 KGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-------VACG 109
YAWG G LG + I + D RN+P+L+ N V + V+ G
Sbjct: 471 NNDTYAWGRSDYGVLG--------TSIDVQGD---RNLPVLINSNSVVVDNVKFIDVSSG 519
Query: 110 HSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
H + DG ++ WG N+ GQ KS
Sbjct: 520 FQHNVAMSIDGSLYSWGCNA-GQRLGFKS 547
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKEL---LPRRVVALDGIFIKDVACGGVHTCALTSKGAL 60
D Y WG G LG GD+ L + V +D + DV+ G H A++ G+L
Sbjct: 473 DTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSL 532
Query: 61 YAWGGCQAGQ 70
Y+W GC AGQ
Sbjct: 533 YSW-GCNAGQ 541
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
I WG G + +C++ S G E+ ++ + L ++ G +H+ +T +G LY +
Sbjct: 161 ITIWGNG-IRNYKNCNMSSIGFSEMYNQQKIVL-------ISTGAIHSSFITDQGNLYTF 212
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G G+LG G S+S P + +F+ P L V + +A G H+L GK++
Sbjct: 213 GDGLLGKLGHG-NLESYS-SPKLVE-FFQTKPSLRVVS----IANGGKHSLALTICGKVY 265
Query: 124 GWGYNSYGQ 132
WG N Q
Sbjct: 266 SWGGNDSCQ 274
Score = 37.7 bits (86), Expect = 0.075, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
Query: 39 IFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV 98
I I ++CG + +T KG L+ +G G+LGLG Q+ P + + I
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFII-- 395
Query: 99 VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQA-----ANEKS----------TYAWY 143
++ G H+LV G + +G N GQ +N+++ +
Sbjct: 396 ------DMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVLTD 169
P++ + K++AGG HS ++D
Sbjct: 450 QQPIN-----IIKVSAGGYHSIAISD 470
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 4 DIYTW-----GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
++YTW G GQLGH S + P+ V L G ++ V+CG T +T +G
Sbjct: 371 ELYTWVNMQGGSKLHGQLGHGDRASYRQ---PKHVEKLQGKSVQKVSCGSDFTVCITDEG 427
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
LY++G G LG+ S P D +F N P V V+CG SH + R
Sbjct: 428 QLYSFGSDYYGCLGVNQSAGSEVLEPLLVD-FFLNEP-------VDQVSCGDSHIMALTR 479
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
++ WG YG+ + + P V+
Sbjct: 480 SKSVYSWGCGEYGRLGLDSEDDVYSPQKVE 509
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y+WG G G+LG L S D P++V G+ I +V CG + LT G + A G
Sbjct: 483 VYSWGCGEYGRLG---LDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACG 539
Query: 65 GCQAGQLGLGPQT------RSFSFIP-NESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
+ +LGL T +F +P S T + + ++ ++ G +HT
Sbjct: 540 LNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFY----KIRSISPGRTHTAAID 595
Query: 118 RDGKIHGWGYNSYGQ 132
G++ +G N GQ
Sbjct: 596 ERGRLLTFGSNKCGQ 610
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I+ ++ G HT A+ +G L +G + GQLG+G + I +L P
Sbjct: 581 IRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHL------------GINLLGGP 628
Query: 101 NG---VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAA---NEKST-----YAWYPSPVDW 149
G V V+CG T D I WG G+ A NE+ +W P P+
Sbjct: 629 LGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSW-PRPIFG 687
Query: 150 CVGEVRKLAAGGGHSAVLTD 169
+ V L+ G H+ ++ +
Sbjct: 688 SLHHVTDLSCRGWHTILIVE 707
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 34/179 (18%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHTCALTSKGALYA 62
++Y WG G P+++ G + + V G H +T + LY
Sbjct: 330 EVYVWGGGKT---------------TPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYT 374
Query: 63 WGGCQA-----GQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
W Q GQLG G R+ P + + VQ V+CG T+
Sbjct: 375 WVNMQGGSKLHGQLGHG--DRASYRQPKHVEK--------LQGKSVQKVSCGSDFTVCIT 424
Query: 118 RDGKIHGWGYNSYGQAANEKS--TYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 173
+G+++ +G + YG +S + P VD+ + E V +++ G H LT + S+
Sbjct: 425 DEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSV 483
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78
L G + V+CG T A T+ ++AWG G+L + P R
Sbjct: 629 LGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNER 671
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 29 LPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESD 88
LPR V+ G + +ACG H L+S G L AWGG + GQ G+G R + + D
Sbjct: 767 LPR-VLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGD 825
Query: 89 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAAN--EKSTYAWYPSP 146
++ +ACG H+ DG + +G+ +GQ + ++ P+
Sbjct: 826 W-----------PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTR 874
Query: 147 VDWCVGEVRKLAAGGGHSAVLTDA 170
V+ + +V ++A G H+ VLTD
Sbjct: 875 VNGLICKVTQIACGRAHTVVLTDT 898
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
LDG + VACG H+ +TS+G LY WG QLG G + E F
Sbjct: 1020 LDGNIV-SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM-----EPHQVFE--- 1070
Query: 96 ILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQ 132
PNG + V+ G++HT+ DG + WG N +GQ
Sbjct: 1071 ----PNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQ 1105
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP 100
I+ +ACG H+ + S G+L+ +G GQLG G + S +P +
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK------- 881
Query: 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE---KSTYAWYPSPVDWCVGEVRKL 157
V +ACG +HT+V G++ G SYGQ + K +A+ P P+ VR +
Sbjct: 882 --VTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPL--RVRDI 937
Query: 158 AAGGGHSAVLTD 169
A HS +T+
Sbjct: 938 ATHYYHSICITE 949
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHTCALTSKGALYA 62
++T+G G GQLGH ++ +L+P RV +G+ K +ACG HT LT G +
Sbjct: 848 LWTFGWGVWGQLGHGG-RNNSNQLVPTRV---NGLICKVTQIACGRAHTVVLTDTGRVLV 903
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
G GQ+G + ++ F P+ + P V+ +A + H++ D ++
Sbjct: 904 CGSGSYGQMG----------VDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRV 953
Query: 123 HGWGYN 128
WG N
Sbjct: 954 FEWGRN 959
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YTWG G QLGH + ++ + P +V +G +V+ G HT A T G+++AWG
Sbjct: 1043 LYTWGKGLDYQLGH---GNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWG 1099
Query: 65 GCQAGQLGLGPQ--------TRSF--------SFIPNESDTYFRNIPILV 98
GQ G+ + T+ F F+PN ++ F P L+
Sbjct: 1100 KNDFGQCGVLTKKNGNSADVTKKFFFQARDGRRFMPNVDESQFVQKPGLI 1149
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+++WG GQLGH GD + L P+ + L I ACG HT ALT G +Y
Sbjct: 144 LWSWGRNDKGQLGH-----GDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYT 198
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+G + GQLG G QT + + + + + PI+ VACG +++ G +
Sbjct: 199 FGENKLGQLGQGNQTDA---VLSPATIQYNGQPIV-------KVACGAEFSMIVDCKGNL 248
Query: 123 HGWGYNSYGQ 132
+ +G YGQ
Sbjct: 249 YSFGCPEYGQ 258
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+YT+G +GQLG + +L + +G I VACG + + KG LY++G
Sbjct: 196 VYTFGENKLGQLGQGNQTDA---VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFG 252
Query: 65 GCQAGQLGLGPQTRSFS----------FIPNESDTYFRNIP---ILVVPNGV-QLVACGH 110
+ GQLG + + IP + +L VPN V + VACG
Sbjct: 253 CPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGA 312
Query: 111 SHTLVYMRDGKIHGWGYNSYGQ 132
+HTLV ++ WG+ YG+
Sbjct: 313 NHTLVLDSQKRVFSWGFGGYGR 334
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 4 DIYTWGLGSVGQLGHCS---------LQSGDKELLPRRV------------VALDGIFIK 42
++Y++G GQLGH S D EL+PRRV + + + +
Sbjct: 247 NLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVAR 306
Query: 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP-N 101
DVACG HT L S+ +++WG G+LG Q +P R + + P
Sbjct: 307 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--EMVP-------RLVKLFDFPGR 357
Query: 102 GVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAG 160
G + CG+ + G + WG N YP V D C ++R LA G
Sbjct: 358 GATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACG 411
Query: 161 GGHSAVLTDACSL 173
V D ++
Sbjct: 412 KSSIIVAADDSTI 424
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 30 PRRVVALDGIFIKDVACG--GVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
P R L + + V G H+ +T++G L++WG GQLG G
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHG------------- 158
Query: 88 DTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA-WY 143
DT P L+ G +++ ACG +HTL +G ++ +G N GQ T A
Sbjct: 159 DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLS 218
Query: 144 PSPVDWCVGEVRKLAAGGGHSAVL 167
P+ + + + K+A G S ++
Sbjct: 219 PATIQYNGQPIVKVACGAEFSMIV 242
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+ +++TWG G GQLGH GD L P V LDG + + GG H+ ALT+K
Sbjct: 518 LRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+Y+WG GQLG +E T + + +GV VA GH ++L +
Sbjct: 573 QVYSWGSNTFGQLG-----------HSEFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVD 621
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPS----PVDWC---VGEVRKLAAGGGHSAVLTDAC 171
Y S Q E T PS PV +G + ++ AG L D
Sbjct: 622 TEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSKLGYISRVTAGKDSYLALVDKN 681
Query: 172 SL---KELCEFRLAESVTLSNASEIEDVASR 199
+ L E E S SEI+ R
Sbjct: 682 IMGYIASLHELATTERRFYSKLSEIKSQILR 712
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
G V G +S E+ P + AL G + VA G H+ A+T G +Y WG
Sbjct: 60 GEVYSFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENA 119
Query: 68 AGQLGLGPQTRSFSFIP-NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWG 126
AGQ + Q P + SD+ P+L V + +ACG HTL +I WG
Sbjct: 120 AGQCAVANQQYVSEPSPVSISDS--ETSPLLAV--RILQLACGEEHTLALSISREIWAWG 175
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 18/141 (12%)
Query: 22 QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
Q+G L P R+ G + A G H LT G +Y++G L ++ +
Sbjct: 24 QAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-------LPWKSEAAE 76
Query: 82 FIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
P+ P+L +V + V VA G H+ G ++ WG N+ GQ A
Sbjct: 77 ICPSS--------PLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQ 128
Query: 139 TYAWYPSPVDWCVGEVRKLAA 159
Y PSPV E L A
Sbjct: 129 QYVSEPSPVSISDSETSPLLA 149
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 23/122 (18%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-------GIFIKDVACGGVHTCALTSK 57
+Y WG + GQ C++ + P V D + I +ACG HT AL+
Sbjct: 112 VYMWGENAAGQ---CAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSIS 168
Query: 58 GALYAWG-GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 116
++AWG GCQ G + T +F + + +L VACG H+L
Sbjct: 169 REIWAWGTGCQLGLI-----TTTFPVTKPQKVEHLAGRVVLQ-------VACGAFHSLAL 216
Query: 117 MR 118
++
Sbjct: 217 VQ 218
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I T+G GS G LGH SL + P V AL G + VACG H AL+++ L+AWG
Sbjct: 412 IMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTERELFAWG 468
Query: 65 GCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGKI 122
+G+LGLG TR ES + + +P+ P G Q V CG +++ G+
Sbjct: 469 RGDSGRLGLG--TR-------ESHSCPQQVPM---PPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 123 HGWGYNSYGQAANEKSTYAWYPSP 146
G N + + + + P P
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVP 540
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
D YT+G GQLG + + G + P +V L+GI + VACG T A+ ++ +Y+W
Sbjct: 581 DCYTFGSNQHGQLG-TNTRRGSRA--PCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSW 637
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119
G G+LG + +T+ P V V+C H +TL+ +R
Sbjct: 638 GKGARGRLGRRDEDAGLPRPVQLDETH---------PYTVTSVSCCHGNTLLAVRS 684
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 36 LDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIP 95
LD + + G H+ A+T+ G Y +G Q GQLG TR S P +
Sbjct: 558 LDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGT--NTRRGSRAPCKVQGL----- 610
Query: 96 ILVVPNGVQL--VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD 148
G+++ VACG + T+ + +++ WG + G+ + A P PV
Sbjct: 611 -----EGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGR-RDEDAGLPRPVQ 659
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+++ WG G G+LG L + + P++V G + V CG + LT G A
Sbjct: 463 ELFAWGRGDSGRLG---LGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALAC 519
Query: 64 GGCQAGQLGLGPQTRSFSFIPNE------SDTYFRNIPILVVPNGVQLVACGHSHTLVYM 117
G + +LGL + +P++ S T + P+ P + + G +H+
Sbjct: 520 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEP--LLSIDLGTAHSAAVT 577
Query: 118 RDGKIHGWGYNSYGQ 132
G + +G N +GQ
Sbjct: 578 ASGDCYTFGSNQHGQ 592
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 88/239 (36%), Gaps = 25/239 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG GQL LLP+R+ A I V G H A T G ++
Sbjct: 232 ELYVWGSNKHGQLA----SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVF 287
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPN------GVQLVACGHSHTLV 115
WG GQLG +TR + + + P P+ G ++CG H L
Sbjct: 288 TWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLA 347
Query: 116 YMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLTDACS 172
+ G H WG+N +G + W P PV + +G + G GHS L C
Sbjct: 348 VI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG--LHVGCGAGHSLAL---CQ 401
Query: 173 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRNG 231
L L SVT + ++ S+ E ER E D RNG
Sbjct: 402 LPALPALGQHPSVTSPSPDATKEARSQEAMEQERNQKERHAETSPQAQ----SDRFRNG 456
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
++ WG S GQLG G KE +L + ++ IK + GG H+ +T +G+L+
Sbjct: 17 LFAWGANSYGQLG-----LGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLF 71
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
G + GQLGLG F P +S ++ +Q VACG T++ +G+
Sbjct: 72 VCGLNKDGQLGLGHTEEVLYFTPCKS----------LLGCAIQQVACGWDFTIILTENGQ 121
Query: 122 IHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLT 168
+ G NS+GQ P ++ +V +AAG H+ T
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAAT 169
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P V L+ V G H+ +LT G LY WG + GQL +F +P +
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA---SQAAFLLLPQRIEA 259
Query: 90 Y-FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ 132
F+N I V + G +H + GK+ WG YGQ
Sbjct: 260 RCFQNEKIAAVWS-------GWTHLVAQTVTGKVFTWGRADYGQ 296
Score = 37.7 bits (86), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 69/184 (37%), Gaps = 33/184 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++ GL GQLG L ++ L +L G I+ VACG T LT G + +
Sbjct: 69 SLFVCGLNKDGQLG---LGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSC 125
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G GQLG+ P IP I ++ V +A G H L G +
Sbjct: 126 GSNSFGQLGV-PHGPRRCVIPQA---------IELLREKVVSIAAGLRHALAATASGTVF 175
Query: 124 GWGYN--SYGQ------------AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 169
WG S G+ A E ST + CV AG HSA LTD
Sbjct: 176 QWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV------LAGSDHSASLTD 229
Query: 170 ACSL 173
A L
Sbjct: 230 AGEL 233
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 122 IHGWGYNSYGQAA-NEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLTDACSL 173
+ WG NSYGQ K D+C G ++++ GGGHSAV+TD SL
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSL 70
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 53 ALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSH 112
A+ + AL+AWG GQLGLG + S + + ++ + G H
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLS---------AQQLSDFCKSGCIKRITGGGGH 60
Query: 113 TLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTD 169
+ V +G + G N GQ + Y +P +G ++++A G + +LT+
Sbjct: 61 SAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTE 118
>sp|Q54HT1|TIRA_DICDI Protein tirA OS=Dictyostelium discoideum GN=tirA PE=2 SV=1
Length = 1336
Score = 57.4 bits (137), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 28/158 (17%)
Query: 5 IYTWGLGSVGQLGH------CSLQSGDKELL-----PRRVVALDGIFIKDV---ACGGVH 50
I+T GL GQLG+ C G+ +L+ R + ++ F+K V +CG
Sbjct: 397 IHTVGLNKFGQLGYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKDF 456
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSF---IPNESDTYFRNIPILVVPNGVQLVA 107
LT++G +++WG GQLGLG ++ + N D Y N + ++
Sbjct: 457 NVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKF-----ISFIS 511
Query: 108 CGHSHTLVY----MRDG--KIHGWGYNSYGQAANEKST 139
CG +H++ DG +++GWG NS GQ + S+
Sbjct: 512 CGGNHSIAIESNSSTDGNCRLYGWGSNSQGQIGEKYSS 549
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 84/211 (39%), Gaps = 28/211 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+ +++TWG G GQLGH GD L P V LDG + + GG H+ ALT+K
Sbjct: 518 LRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 118
+Y+WG GQLG +E T + + NGV VA G ++L +
Sbjct: 573 QVYSWGSNTFGQLG-----------HSEFPTTVPRLSKVSSENGVWSVAAGQDYSLFLVD 621
Query: 119 DGKIHGWGYNSYGQAANEKSTYAWYPS----PVDWC---VGEVRKLAAGGGHSAVLTDAC 171
Y S Q E T PS PV +G + ++ AG L D
Sbjct: 622 TEDFQPGLYYSGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLALVDKN 681
Query: 172 SL---KELCEFRLAESVTLSNASEIEDVASR 199
+ L E E S SEI+ R
Sbjct: 682 IMGYIASLHELASTERRFYSKLSEIKSQILR 712
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
G V G +S E+ P + AL G + VA G H+ A+T G +Y WG
Sbjct: 60 GEVYSFGTLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENA 119
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRN---IPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQ + Q ++P S + P L V + +ACG HTL +I
Sbjct: 120 AGQCAVANQ----QYVPEPSPVSISDSETSPSLAV--RILQLACGEEHTLALSLSREIWA 173
Query: 125 WG 126
WG
Sbjct: 174 WG 175
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 22 QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81
Q+G L P R+ G + A G H LT G +Y++G L ++ S
Sbjct: 24 QAGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFG-------TLPWKSESAE 76
Query: 82 FIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKS 138
P+ P+L +V + V VA G H+ G ++ WG N+ GQ A
Sbjct: 77 ICPSS--------PLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQ 128
Query: 139 TYAWYPSPVDWCVGE--------VRKLAAGGGHSAVLT 168
Y PSPV E + +LA G H+ L+
Sbjct: 129 QYVPEPSPVSISDSETSPSLAVRILQLACGEEHTLALS 166
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 32/147 (21%)
Query: 4 DIYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++Y WGL GQ + L+ G + P + L IK++A G HT ALT G
Sbjct: 271 NVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHHTLALTEDGQ 330
Query: 60 LYAWGGCQAGQLGLGPQTR--------------SFSFIPNESDTYFRNIPILVVPNGVQL 105
+YAWG ++G+ P+ + SFSF+ N + ++
Sbjct: 331 VYAWGRYDMKEIGI-PKDKLPKSTFKINTGTHGSFSFLQN------------LFAVKIKT 377
Query: 106 VACGHSHTLVYMRDGKIHGWGY-NSYG 131
+ G H+ DG ++ WG+ +YG
Sbjct: 378 IGVGSHHSFAVTEDGVVYAWGFAETYG 404
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRV------VALDGIFIKDVACGGVHTCALTS 56
LD++ WG GS+ +LG + +KE+ R+ L G I D A GG+HT AL
Sbjct: 24 LDVFVWGTGSMCELG-LGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDG 82
Query: 57 KGALYAWGGCQAGQLG 72
K +++WGG + LG
Sbjct: 83 KNRIWSWGGNDSEVLG 98
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 18/134 (13%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIF-IKDVACGGVHTCALT 55
+ LD W G GQ Q G + L R +L+ G++ IK +A G H A+
Sbjct: 212 LALDSKEWMPGVNGQ----QYQLGRRILERHRYRSLEPQQFGLYNIKYIASGDFHCFAID 267
Query: 56 SKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVP---NGVQLVACGHSH 112
+YAWG Q GQ L D P L+ G++ +A G H
Sbjct: 268 HSHNVYAWGLNQYGQCALTGDNGEL------EDGSVLMKPTLIPELSHKGIKEIAAGEHH 321
Query: 113 TLVYMRDGKIHGWG 126
TL DG+++ WG
Sbjct: 322 TLALTEDGQVYAWG 335
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 20/119 (16%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--------------GIFIKDVACGGVH 50
+Y WG + ++G K+ LP+ ++ + IK + G H
Sbjct: 331 VYAWGRYDMKEIGI------PKDKLPKSTFKINTGTHGSFSFLQNLFAVKIKTIGVGSHH 384
Query: 51 TCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG 109
+ A+T G +YAWG + GLGP +T +N IL++ G Q G
Sbjct: 385 SFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRIVNTATKNEDILLIGAGGQFSVSG 443
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 88/239 (36%), Gaps = 25/239 (10%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG GQL + +P+++ A + + G H A T G ++
Sbjct: 232 EVYVWGSNKHGQLAN----EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMF 287
Query: 62 AWGGCQAGQLGLGPQT-------RSFSFIP-NESDTYFRNIPILVVPNGVQLVACGHSHT 113
WG GQLG +T + SF+P + + P + G V+CG H
Sbjct: 288 TWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT--GATEVSCGSEHN 345
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLTDACS 172
L + G + WG+N +G + W P PV + L G GHS L C
Sbjct: 346 LAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL---CQ 401
Query: 173 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRNG 231
L VT + IED S+ + ER E D +RNG
Sbjct: 402 LPAHPALVQDPKVTYLSPDAIEDTESQKAMDKERNWKERQSETSTQSQ----SDWSRNG 456
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P RV L+ V G H+ +LT G +Y WG + GQL +F +P + +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEA 259
Query: 90 Y-FRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTY 140
+ F+N V + G +H + GK+ WG YGQ + TY
Sbjct: 260 HCFQN-------EKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETY 304
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 12 SVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQ 70
S GQLG L + LLP+++ ++ + GG H+ +T G L+ G + GQ
Sbjct: 24 SYGQLG---LGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQ 80
Query: 71 LGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSY 130
LGLG F P +S + P +Q VACG T++ +G++ G NS+
Sbjct: 81 LGLGHTEDIPYFTPCKS--------LFGCP--IQQVACGWDFTIMLTENGQVLSCGSNSF 130
Query: 131 GQ 132
GQ
Sbjct: 131 GQ 132
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 68/180 (37%), Gaps = 31/180 (17%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHTCALTSKGALY 61
D++ GL GQLG G E +P +L G I+ VACG T LT G +
Sbjct: 69 DLFVCGLNKDGQLG-----LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+ G GQLG+ P +P + + V +A G H + G
Sbjct: 124 SCGSNSFGQLGV-PHGPRRCVVPQAIELHKEK---------VVCIAAGLRHAVAATASGI 173
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA-----------AGGGHSAVLTDA 170
+ WG G A+ + P+ + E ++ AG HSA LTDA
Sbjct: 174 VFQWGT---GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 230
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI----FIKDVACGGVHTCALTSKG 58
+ IY+WG G++GQLG + + D P V+ DG + D+ GG H+ + G
Sbjct: 1 MKIYSWGSGNLGQLGIGN--TDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNG 58
Query: 59 ALYAWGGCQAGQLGLGPQ-----------TRSFSFIPNESDTYFRNIPILV---VPNGVQ 104
LY +G +GQLG+ + + ++ IP ++ N ++
Sbjct: 59 DLYTFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIK 118
Query: 105 LVAC--GHSHTLVYMRDGKIHGWGYNSYGQ 132
+ C G +H+L +G I+ WG NS+GQ
Sbjct: 119 IKNCSGGWAHSLACDNNGNIYSWGSNSHGQ 148
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 30 PRRVVAL--DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL---GPQTRSFSFIP 84
P+ + L + I I V+CG H+ AL+S+ +Y WG + GQL G +S +
Sbjct: 220 PKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNN 279
Query: 85 NE---SDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGK-IHGWGYNSYGQAANEK 137
N +D ++ P L+ N +++ ++CG HTL+ + K + +G N +GQ N
Sbjct: 280 NINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGN 339
Query: 138 STYAWYPSPVD 148
P +D
Sbjct: 340 FIDQSNPCVID 350
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 4 DIYTWGLGSVGQLGH---------CSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAL 54
++ ++G GQLG+ C + L +L+ I IK++ CG ++C L
Sbjct: 323 NVLSFGQNKFGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLL 382
Query: 55 TSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
T++ LY C G+ G+ R S + S+ + N ++ + G H L
Sbjct: 383 TNQDKLYI---CGRGEYGILGDNRDLSLDNSNSNQFKLLNSESFNENKIKNFSIGSEHIL 439
Query: 115 V 115
+
Sbjct: 440 I 440
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 35 ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGL 73
++ I IK+ + G H+ A + G +Y+WG GQLG+
Sbjct: 113 KINSIKIKNCSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHTCALTSKGALY 61
++Y WG GQL ++ LP+R+ A + V G H A T G ++
Sbjct: 232 ELYVWGRNKHGQLASRAV----FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVF 287
Query: 62 AWGGCQAGQLG--LGPQTRSFSFIPNESDTYFRNIPILVVPN------GVQLVACGHSHT 113
WG GQLG L P + + +S F+ P VP+ G ++CG H
Sbjct: 288 TWGRADYGQLGRRLEP-PEAQKPVEQDSSLAFQG-PQNSVPSPLHCLTGATEISCGSEHN 345
Query: 114 LVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL---AAGGGHS 164
L +RD K WG+N +G + + W P+PV +L G GHS
Sbjct: 346 LAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHS 398
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHTCALTSKGALYAW 63
++ WG S GQLG L + LP+++ IK V GG H+ +T G L+
Sbjct: 17 LFAWGANSYGQLG---LGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVC 73
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
G + GQLGLG F + R PI + VACG T++ G++
Sbjct: 74 GLNKDGQLGLGHTEEVLRFTICKP---LRGCPI-------RQVACGWDFTIMLTEKGQVL 123
Query: 124 GWGYNSYGQ 132
G N++GQ
Sbjct: 124 SCGSNAFGQ 132
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P RV L+ G H+ +LT G LY WG + GQL F +P +
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA---SRAVFLPLPQRIEA 259
Query: 90 -YFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQ------------AANE 136
YF++ V V G +H + GK+ WG YGQ +
Sbjct: 260 HYFQD-------EKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQ 312
Query: 137 KSTYAW------YPSPVDWCVGEVRKLAAGGGHS-AVLTDAC 171
S+ A+ PSP+ C+ +++ G H+ AV+ D C
Sbjct: 313 DSSLAFQGPQNSVPSPLH-CLTGATEISCGSEHNLAVIRDKC 353
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHTCALTSKGALY 61
D++ GL GQLG G E + R + L G I+ VACG T LT KG +
Sbjct: 69 DLFVCGLNKDGQLGL-----GHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVL 123
Query: 62 AWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGK 121
+ G GQLG+ P +P I + V VA G H L G
Sbjct: 124 SCGSNAFGQLGV-PHGPRKCVVPQA---------IECLREKVVCVAAGLRHALATTATGS 173
Query: 122 IHGWG 126
+ WG
Sbjct: 174 VFQWG 178
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 122 IHGWGYNSYGQAANEKSTYAWYPSPV-DWC-VGEVRKLAAGGGHSAVLTD 169
+ WG NSYGQ + P + D+C G ++ + GGGHSAV+TD
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD 66
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+ +++TWG G GQLGH GD L P V LDG + + GG H+ ALT+K
Sbjct: 524 LRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 59 ALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 114
+Y+WG GQLG S P T + + NGV VA G ++L
Sbjct: 579 QVYSWGSNTFGQLG-------HSDFP----TTVPRLAKISSENGVWSVAAGRDYSL 623
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
G V G +SG E+ P + AL G ++ VA G H+ A+T G Y WG
Sbjct: 60 GEVYSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENS 119
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRN---IPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQ + Q ++P + + P+L V + +ACG HTL +I
Sbjct: 120 AGQCAVANQ----QYVPEPNPVSIADSEASPLLAV--RILQLACGEEHTLALSISREIWA 173
Query: 125 WG 126
WG
Sbjct: 174 WG 175
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 22 QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC--QAGQLGLGPQTRS 79
Q+G + P R+ G + A G H LT G +Y++G ++G + + P +
Sbjct: 24 QAGSFPITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSS-- 81
Query: 80 FSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
PIL +V V VA G H+ +G + WG NS GQ A
Sbjct: 82 ---------------PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVA 126
Query: 137 KSTYAWYPSPVDWCVGEVRKLAA 159
Y P+PV E L A
Sbjct: 127 NQQYVPEPNPVSIADSEASPLLA 149
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 1 MHLDIYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHTCALTSKG 58
+ +++TWG G GQLGH GD L P V LDG + + GG H+ ALT+K
Sbjct: 524 LRTEVWTWGKGKEGQLGH-----GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 59 ALYAWGGCQAGQLG 72
+Y+WG GQLG
Sbjct: 579 QVYSWGSNTFGQLG 592
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 11 GSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHTCALTSKGALYAWGGCQ 67
G V G +SG E+ P + AL G ++ VA G H+ A+T G Y WG
Sbjct: 60 GEVYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENS 119
Query: 68 AGQLGLGPQTRSFSFIPNESDTYFRN---IPILVVPNGVQLVACGHSHTLVYMRDGKIHG 124
AGQ + Q ++P + + P+L V + +ACG HTL +I
Sbjct: 120 AGQCAVANQ----QYVPEPNPVSIADSEASPLLAV--RILQLACGEEHTLALSISREIWA 173
Query: 125 WG 126
WG
Sbjct: 174 WG 175
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 22 QSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGC--QAGQLGLGPQTRS 79
Q+G + P R+ G + A G H LT G +Y++G ++G + + P +
Sbjct: 24 QAGSFPITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSS-- 81
Query: 80 FSFIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANE 136
PIL +V V VA G H+ +G + WG NS GQ A
Sbjct: 82 ---------------PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVA 126
Query: 137 KSTYAWYPSPVDWCVGEVRKLAA 159
Y P+PV E L A
Sbjct: 127 NQQYVPEPNPVSIADSEASPLLA 149
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNES 87
L P+ + + VACG HT LT G +Y +G Q GQLG G
Sbjct: 955 LAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSG------------- 1001
Query: 88 DTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSP 146
D + P+ V VP + VA G +HT++ G ++ +G GQ S Y P P
Sbjct: 1002 DLQPVSGPVRVQVPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPP 1061
Query: 147 VD 148
D
Sbjct: 1062 QD 1063
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++YT+G GQLG LQ P RV I VA G HT LTSKG +Y +
Sbjct: 986 EVYTFGSNQYGQLGSGDLQPVSG---PVRVQVPGAI--SQVAAGSNHTVLLTSKGMVYTF 1040
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDT 89
G Q GQLG P P + D+
Sbjct: 1041 GNYQKGQLGRLPSDYGLKPPPQDDDS 1066
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVV- 99
+K +A G +T ALT G LY WG + G+LGLG DT R P V+
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLG-------------DTIDRRTPTRVIR 462
Query: 100 --PNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPV 147
V +AC +H+ Y GK++ WG ++E PSP+
Sbjct: 463 LKNEVVSTIACSSTHSACYTESGKMYVWG------QSDETGKIQAIPSPL 506
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
++Y WG+ G+LG L P RV+ L + +AC H+ T G +Y W
Sbjct: 434 ELYMWGINEHGELG---LGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVW 490
Query: 64 G 64
G
Sbjct: 491 G 491
Score = 36.2 bits (82), Expect = 0.21, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 20/150 (13%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRN------- 93
IK VA G H LT G ++ WG GQLG T+ + +
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASS 394
Query: 94 ------------IPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYA 141
P +V V+ +A G +T G+++ WG N +G+ +
Sbjct: 395 SSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDR 454
Query: 142 WYPSPVDWCVGE-VRKLAAGGGHSAVLTDA 170
P+ V E V +A HSA T++
Sbjct: 455 RTPTRVIRLKNEVVSTIACSSTHSACYTES 484
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVHTCALTSKGAL 60
+ ++T+G GS G LG + + D P++V I +K VACG HT +T L
Sbjct: 1 MSVFTFGHGSNGALGLGKI-TDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHL 59
Query: 61 YAWG 64
Y G
Sbjct: 60 YICG 63
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
I WG + GQ+G S + + P L I IK ++ G T AL++ G LY++G
Sbjct: 210 ILLWGASNSGQIG--SPEYNRVQYDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFG 267
Query: 65 GCQAGQLGLGP--QTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKI 122
+LG G R I N+ L+ N + + CG HT+ D KI
Sbjct: 268 SSTFNELGNGDMFNEREPKLIDNQ----------LLQDNEIIDLECGFFHTVALTSDNKI 317
Query: 123 HGWGYNSYGQ 132
WG N Q
Sbjct: 318 LTWGRNQESQ 327
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWG 64
+Y++G + +LG+ + + + L + D I D+ CG HT ALTS + WG
Sbjct: 263 LYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEII-DLECGFFHTVALTSDNKILTWG 321
Query: 65 GCQAGQLGLGPQ-TRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIH 123
Q Q P+ T SF ++ + + L + + + + ++ + +G I+
Sbjct: 322 RNQESQCFPVPEGTGKGSF----TNVQYLDTSSLGDHDKIIQIGASNLNSYILTENGNIY 377
Query: 124 GWGYNSYGQAANEKSTYA 141
G N +GQ EKS +
Sbjct: 378 SIGSNDHGQCGIEKSNFK 395
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 29/138 (21%)
Query: 4 DIYTWGLGSVGQLGHCSLQSGDK----ELLPRRVVALDGIFIKDVACGGVHTCALTSKGA 59
++YTWG LGH + QS E+ PR G++IK + H+ L+ KG
Sbjct: 144 ELYTWGDNVNFTLGHGTQQSKHHPELVEMFPR-----SGVYIKQMVLCKFHSVFLSQKGQ 198
Query: 60 LYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQ-----LVACGHSHTL 114
+Y G Q G+LG G + +P LV G++ VA HT+
Sbjct: 199 VYTCGHGQGGRLGHGDELTCL-------------VPRLV--EGLRGHPCTQVAGAKDHTV 243
Query: 115 VYMRDGKIHGWGYNSYGQ 132
V DG ++ +G N++ Q
Sbjct: 244 VLTEDGYVYTFGLNTFHQ 261
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 5 IYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYA 62
+YT G G G+LGH GD+ L+PR V L G VA HT LT G +Y
Sbjct: 199 VYTCGHGQGGRLGH-----GDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYT 253
Query: 63 WGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGK 121
+G QLG+ P P + R I + L VA G HT+++ +D
Sbjct: 254 FGLNTFHQLGIQP--------PPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA- 304
Query: 122 IHGWGYN 128
++ G N
Sbjct: 305 VYTVGLN 311
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 173 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 209
LKE+CE +AE +TL NA+E+ + A+ ++ L C
Sbjct: 849 LKEICEVTIAERITLKNAAELLEFAALYNADQLKLSC 885
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 30 PRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDT 89
P +V I +A G H L +G ++AWG Q QLG R
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMER----------- 260
Query: 90 YFRNIPILVVPNG---VQLVACGHSHTLVYMRDGKIHGWGYNSYGQ--AANEKSTYAWYP 144
FR + P G V+ +A G +H +D K+ WG N +GQ + + A
Sbjct: 261 -FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVT 319
Query: 145 SPVDWCVGE---VRKLAAGGGHSAVLT 168
P + + +R +AAG HS +L+
Sbjct: 320 KPKRLALPDNVVIRSIAAGEHHSLILS 346
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 5 IYTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAW 63
+ +WGL GQ G ++ G P+R+ D + I+ +A G H+ L+ G LY+
Sbjct: 295 LVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSC 354
Query: 64 GGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGV---QLVACGHSHTLVYMRDG 120
G ++G+ P+ + + R +P+ N V + VA G H++ ++G
Sbjct: 355 GRLDMFEVGI-PKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNG 413
Query: 121 KIHGWGY 127
+ WG+
Sbjct: 414 IAYSWGF 420
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIKDVACGGVHTCALTSKGAL 60
LDI+ WG GS+ +LG L + PR + D I A GG+HT AL + +
Sbjct: 46 LDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 61 YAWGGCQAGQLG 72
++WG G LG
Sbjct: 106 WSWGCNDVGALG 117
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Query: 51 TCALTSKGALYAWGG--CQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVAC 108
+CAL S G +YAWG C G LG P +P N VQL A
Sbjct: 177 SCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTP-------WKVPTFSKYNIVQL-AP 228
Query: 109 GHSHTLVYMRDGKIHGWG---YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 165
G H L +G + WG N G+ E+ P + + V+ +A+G H
Sbjct: 229 GKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTL-DPRPFGLRHVKYIASGENHCF 287
Query: 166 VLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALA 206
LT +L + L + + ++ED A T + LA
Sbjct: 288 ALTKD---NKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLA 325
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGP 75
K VA G H+ A+ G Y+WG + +GLGP
Sbjct: 396 FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGP 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,923,174
Number of Sequences: 539616
Number of extensions: 3723110
Number of successful extensions: 8921
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7993
Number of HSP's gapped (non-prelim): 409
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)