Query 026784
Match_columns 233
No_of_seqs 213 out of 1655
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 22:05:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4d9s_A UVB-resistance protein 100.0 1.3E-41 4.4E-46 297.5 11.4 216 1-232 138-360 (406)
2 3kci_A Probable E3 ubiquitin-p 100.0 1.2E-41 4.1E-46 296.2 8.9 216 1-232 124-348 (389)
3 4d9s_A UVB-resistance protein 100.0 3.2E-41 1.1E-45 295.0 11.0 210 3-231 88-307 (406)
4 3kci_A Probable E3 ubiquitin-p 100.0 1.9E-41 6.3E-46 295.0 4.6 218 2-231 19-243 (389)
5 3mvd_K Regulator of chromosome 100.0 9.9E-40 3.4E-44 286.7 11.4 212 1-231 41-273 (423)
6 3of7_A Regulator of chromosome 100.0 2.7E-39 9.3E-44 287.9 10.6 217 1-232 165-408 (473)
7 3of7_A Regulator of chromosome 100.0 3.4E-39 1.2E-43 287.3 10.1 228 1-231 27-287 (473)
8 1a12_A RCC1, regulator of chro 100.0 1.2E-38 4.1E-43 279.1 11.8 216 1-231 76-316 (413)
9 1a12_A RCC1, regulator of chro 100.0 3.7E-39 1.3E-43 282.4 7.9 220 1-231 128-367 (413)
10 3mvd_K Regulator of chromosome 100.0 3.1E-37 1.1E-41 270.8 12.5 219 1-232 144-377 (423)
11 3qhy_B Beta-lactamase inhibito 100.0 5.2E-34 1.8E-38 238.0 8.2 169 2-231 80-248 (282)
12 3qhy_B Beta-lactamase inhibito 100.0 4.8E-34 1.7E-38 238.2 7.5 170 2-232 41-210 (282)
13 4gbf_A Phikz131; 7-bladed beta 97.5 0.00025 8.6E-09 56.8 6.6 71 40-133 310-380 (400)
14 4gbf_A Phikz131; 7-bladed beta 96.0 0.0079 2.7E-07 48.3 4.8 66 101-178 309-374 (400)
15 1xip_A Nucleoporin NUP159; bet 64.0 38 0.0013 28.5 9.0 74 28-126 79-152 (388)
16 1p22_A F-BOX/WD-repeat protein 54.2 91 0.0031 25.7 14.2 68 40-127 215-283 (435)
17 1p22_A F-BOX/WD-repeat protein 39.5 1.6E+02 0.0054 24.2 15.8 104 40-176 258-361 (435)
18 4aez_A CDC20, WD repeat-contai 36.9 1.7E+02 0.0057 23.7 10.6 64 41-127 96-163 (401)
19 1xip_A Nucleoporin NUP159; bet 36.9 78 0.0027 26.6 6.5 61 103-175 90-150 (388)
20 2ovr_B FBW7, F-BOX/WD repeat p 34.2 1.9E+02 0.0066 23.6 13.5 65 41-127 122-186 (445)
21 1suu_A DNA gyrase subunit A; t 32.7 1.8E+02 0.0063 23.3 8.0 76 43-129 53-133 (312)
22 3p6j_A De novo designed beta-t 30.9 85 0.0029 22.4 4.9 24 40-63 73-97 (142)
23 1k3i_A Galactose oxidase precu 26.6 1.3E+02 0.0044 26.8 6.5 20 109-128 243-262 (656)
24 2z3g_A Blasticidin-S deaminase 26.5 36 0.0012 23.9 2.2 17 51-68 31-47 (130)
25 2ftc_O L27MT, MRP-L27, mitocho 25.0 34 0.0012 21.3 1.6 20 42-61 49-68 (69)
26 2ovr_B FBW7, F-BOX/WD repeat p 24.8 2.8E+02 0.0097 22.6 14.9 104 40-176 281-387 (445)
27 3q7x_A De novo designed beta-t 23.4 1.3E+02 0.0045 21.0 4.7 19 45-63 54-72 (132)
28 1k3i_A Galactose oxidase precu 22.8 1.5E+02 0.0051 26.4 6.1 23 110-132 511-534 (656)
29 2fr5_A Cytidine deaminase; tet 22.5 47 0.0016 23.9 2.2 17 51-68 40-56 (146)
30 1suu_A DNA gyrase subunit A; t 22.2 2.6E+02 0.0088 22.4 7.0 68 106-174 54-127 (312)
31 1q7f_A NHL, brain tumor CG1071 21.0 2.1E+02 0.0073 21.5 6.1 24 41-64 166-191 (286)
32 1r5t_A Cytidine deaminase; zin 20.9 46 0.0016 23.8 1.9 17 51-68 36-52 (142)
No 1
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=1.3e-41 Score=297.53 Aligned_cols=216 Identities=26% Similarity=0.403 Sum_probs=174.4
Q ss_pred CCCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCc
Q 026784 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80 (233)
Q Consensus 1 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~ 80 (233)
.+|+||+||.|.+||||.+.. .....|+++..+.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+......
T Consensus 138 ~~G~v~~wG~n~~GqLG~g~~---~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~ 214 (406)
T 4d9s_A 138 MEGEVQSWGRNQNGQLGLGDT---EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL 214 (406)
T ss_dssp TTSCEEEEECCTTSTTCSSSC---CCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEE
T ss_pred CCCcEEEeCCCCCccCCCCCC---CCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcC
Confidence 489999999999999999875 45678999999999899999999999999999999999999999999998766542
Q ss_pred ccCCCCCCccccccCeee---cCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCC-CEEE
Q 026784 81 SFIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~p~~~---~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~-~i~~ 156 (233)
.|..+ ...+|++|+||.+|+++|+++|+||+||.|.+||||+++......|++++.+.. +|++
T Consensus 215 -------------~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~ 281 (406)
T 4d9s_A 215 -------------VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQ 281 (406)
T ss_dssp -------------EEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEE
T ss_pred -------------ccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEE
Confidence 22222 247899999999999999999999999999999999999988999999987665 7999
Q ss_pred EeccCCceEEEEcCCCceeeEEeeeccccccCCC--cchhhhhhhcCcHHHHHHHHHHHHhh-hcCCccCCcccccCCC
Q 026784 157 LAAGGGHSAVLTDACSLKELCEFRLAESVTLSNA--SEIEDVASRTGSEALARLCERLREHL-LHGDEFDCDDDTRNGN 232 (233)
Q Consensus 157 i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~cg~~~~~~-~~~~~~~~~~~~~~~~ 232 (233)
|+||.+|++||+++|+||.||....++.+.-... ..+..+..+....++++.|+..+..+ .+++++|+||.+++|.
T Consensus 282 i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~~Gq 360 (406)
T 4d9s_A 282 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 360 (406)
T ss_dssp EEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCTTST
T ss_pred EEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCCCCc
Confidence 9999999999999999977665444433211111 11122222233346668888888777 4568899999998763
No 2
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=296.18 Aligned_cols=216 Identities=27% Similarity=0.402 Sum_probs=174.4
Q ss_pred CCCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCc
Q 026784 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80 (233)
Q Consensus 1 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~ 80 (233)
.+|+||+||.|.+||||.+.. .....|++++.+.+.+|++|+||..|+++|+++|+||+||.|.+||||.+......
T Consensus 124 ~~G~v~~wG~n~~GqLG~g~~---~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~ 200 (389)
T 3kci_A 124 SEGEVYSWGEAEDGKLGHGNR---SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL 200 (389)
T ss_dssp TTSCEEEEECCGGGTTCSSSC---CCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEE
T ss_pred CCCCEEEEeCCCCCcCCCCCC---ccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccc
Confidence 489999999999999999875 45678999999999899999999999999999999999999999999998776542
Q ss_pred ccCCCCCCccccccCeee---cCCCeEEEecCC--ceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCC-CE
Q 026784 81 SFIPNESDTYFRNIPILV---VPNGVQLVACGH--SHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EV 154 (233)
Q Consensus 81 ~~~~~~~~~~~~~~p~~~---~~~~i~~i~~G~--~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~-~i 154 (233)
.|..+ ...+|++|+||. .|+++|+++|+||+||.|.+||||.+.......|++|+.+.. +|
T Consensus 201 -------------~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v 267 (389)
T 3kci_A 201 -------------KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 267 (389)
T ss_dssp -------------EEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCE
T ss_pred -------------cceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcE
Confidence 22222 356899999995 899999999999999999999999999888899999987665 79
Q ss_pred EEEeccCCceEEEEcCCCceeeEEeeecccccc--CCCcchhhhhhhcCcHHHHHHHHHHHHhhh-cCCccCCcccccCC
Q 026784 155 RKLAAGGGHSAVLTDACSLKELCEFRLAESVTL--SNASEIEDVASRTGSEALARLCERLREHLL-HGDEFDCDDDTRNG 231 (233)
Q Consensus 155 ~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~cg~~~~~~~-~~~~~~~~~~~~~~ 231 (233)
++|+||.+|++||+++|+||.||....++.+.- .....+..+....+..++++.|+..+.+++ +++++|+||++++|
T Consensus 268 ~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 268 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 347 (389)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTS
T ss_pred EEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCC
Confidence 999999999999999999976665444333211 111122233333344456678888887774 56799999999876
Q ss_pred C
Q 026784 232 N 232 (233)
Q Consensus 232 ~ 232 (233)
.
T Consensus 348 q 348 (389)
T 3kci_A 348 Q 348 (389)
T ss_dssp T
T ss_pred c
Confidence 3
No 3
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=3.2e-41 Score=295.00 Aligned_cols=210 Identities=27% Similarity=0.421 Sum_probs=170.9
Q ss_pred CcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCccc
Q 026784 3 LDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSF 82 (233)
Q Consensus 3 G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~ 82 (233)
|+||+||.|.+||||.+.. .....|.++..+.+.+|++|+||..|++||+++|+||+||.|.+||||.+.....
T Consensus 88 g~v~~wG~n~~GqLG~g~~---~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~--- 161 (406)
T 4d9s_A 88 MEVYSWGWGDFGRLGHGNS---SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--- 161 (406)
T ss_dssp TEEEEEECCGGGTTCSSSC---CCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCE---
T ss_pred CEEEEEcCCCCcCCCCCCC---CccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCc---
Confidence 4999999999999999875 4567899999999989999999999999999999999999999999999876654
Q ss_pred CCCCCCccccccCeee---cCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCC-CEEEEe
Q 026784 83 IPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 158 (233)
Q Consensus 83 ~~~~~~~~~~~~p~~~---~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~-~i~~i~ 158 (233)
..|..+ ...+|++|+||.+|++||+++|+||+||.|.+||||+++......|+++..+.. +|++|+
T Consensus 162 ----------~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va 231 (406)
T 4d9s_A 162 ----------LVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 231 (406)
T ss_dssp ----------EEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEE
T ss_pred ----------ccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEE
Confidence 223322 246899999999999999999999999999999999999888899999986654 899999
Q ss_pred ccCCceEEEEcCCCceeeEEeeeccccccCCCc-----chhhhhhhcCcHHHHHHHHHHHHhh-hcCCccCCcccccCC
Q 026784 159 AGGGHSAVLTDACSLKELCEFRLAESVTLSNAS-----EIEDVASRTGSEALARLCERLREHL-LHGDEFDCDDDTRNG 231 (233)
Q Consensus 159 ~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~cg~~~~~~-~~~~~~~~~~~~~~~ 231 (233)
||.+|+++|+++|+||.||....+ +++... .+..+.......+.++.|+..+.++ .+++++|+||.++.|
T Consensus 232 ~G~~ht~~l~~~G~v~~wG~n~~G---qlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~G 307 (406)
T 4d9s_A 232 CGWRHTISVSYSGALYTYGWSKYG---QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 307 (406)
T ss_dssp ECSSEEEEEETTCCEEEEECCTTS---TTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTS
T ss_pred ECCCcEEEEcCCCCEEEeeCCCCC---CCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCC
Confidence 999999999999999666654333 333221 1222333333335567788777777 466799999998765
No 4
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=294.97 Aligned_cols=218 Identities=25% Similarity=0.279 Sum_probs=166.2
Q ss_pred CCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcc
Q 026784 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81 (233)
Q Consensus 2 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~ 81 (233)
||+||+||.|.+||||.+.. .....|.++..+.+.+|++|+||..|+++|+++|+||+||.|.+||||.+.......
T Consensus 19 ~G~v~~wG~n~~GqLG~~~~---~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~ 95 (389)
T 3kci_A 19 SGTIYGWGHNHRGQLGGIEG---AKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVST 95 (389)
T ss_dssp --CEEEEEECTTSTTSSCSC---SEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEE
T ss_pred CCeEEEeeCCCCccCCCCcC---ccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccC
Confidence 79999999999999998764 456788888888888899999999999999999999999999999999987655421
Q ss_pred cCCCCCCccccccCeee-cCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCC-CEEEEec
Q 026784 82 FIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~p~~~-~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~-~i~~i~~ 159 (233)
+. .++.+. ...++++|+||.+|++||+++|+||+||.|.+||||+++......|++|+.+.. +|++|+|
T Consensus 96 p~---------~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~ 166 (389)
T 3kci_A 96 PT---------LLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 166 (389)
T ss_dssp EE---------ECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CE---------EcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe
Confidence 11 111110 123468999999999999999999999999999999999988899999987765 8999999
Q ss_pred cCCceEEEEcCCCceeeEEeeeccccccCC--CcchhhhhhhcCcHHHHHHHHH---HHHhhhcCCccCCcccccCC
Q 026784 160 GGGHSAVLTDACSLKELCEFRLAESVTLSN--ASEIEDVASRTGSEALARLCER---LREHLLHGDEFDCDDDTRNG 231 (233)
Q Consensus 160 G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~cg~---~~~~~~~~~~~~~~~~~~~~ 231 (233)
|..|+++|+++|+||.||....++.+.-.. ...+..+....+.+++.+.|+. +.-.+.+++++|+||.++.|
T Consensus 167 G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 167 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGG
T ss_pred CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCC
Confidence 999999999999997776544443321111 1122223333334455677773 33344677899999988654
No 5
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=9.9e-40 Score=286.74 Aligned_cols=212 Identities=20% Similarity=0.249 Sum_probs=164.2
Q ss_pred CCCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCc
Q 026784 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSF 80 (233)
Q Consensus 1 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~ 80 (233)
.+|+||+||.|.+||||++... .....|.+++.+.+ |++|+||..|+++|+++|+||+||.|.+||||.+......
T Consensus 41 ~~G~v~~wG~n~~GqLG~g~~~--~~~~~p~~v~~l~~--v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~ 116 (423)
T 3mvd_K 41 VLGNVLVCGNGDVGQLGLGEDI--LERKRLSPVAGIPD--AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGS 116 (423)
T ss_dssp CCEEEEEEEECTTSTTCSCSSC--CEEEEEEECCSCSS--EEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTS
T ss_pred CCCcEEEEeCCCCCCCCCCCCC--ccCcCCeEccCCCC--ceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCcc
Confidence 4799999999999999998643 35567888888775 8999999999999999999999999999999998765431
Q ss_pred ccCCCCCCccccccCeeec-CCCeEEEecCCceEEEEEcCCcEEEeeC--CCCCCCCCCCCCccccCeeccCCCCCEEEE
Q 026784 81 SFIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGKIHGWGY--NSYGQAANEKSTYAWYPSPVDWCVGEVRKL 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~p~~~~-~~~i~~i~~G~~hs~~L~~~G~v~~wG~--n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i 157 (233)
...|..+. ..+|++|+||..|++||+++|+||+||. |.+||||.+.......|.++.. ..+|++|
T Consensus 117 -----------~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~-~~~i~~v 184 (423)
T 3mvd_K 117 -----------ESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLME-GTVCCSI 184 (423)
T ss_dssp -----------SSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESST-TCCEEEE
T ss_pred -----------ccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecC-CCcEEEE
Confidence 12333332 4689999999999999999999999999 9999999998877777776642 3489999
Q ss_pred eccCCceEEEEcCCCceeeEEeeeccccccCCCc----------------chhhhhhhcCcHHHHHHHHHHHHhhh--cC
Q 026784 158 AAGGGHSAVLTDACSLKELCEFRLAESVTLSNAS----------------EIEDVASRTGSEALARLCERLREHLL--HG 219 (233)
Q Consensus 158 ~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~cg~~~~~~~--~~ 219 (233)
+||.+|+++|+++|+||.||....++ ++... .+..+.......+..+.|+..+.+++ ..
T Consensus 185 a~G~~hs~alt~~G~v~~wG~n~~Gq---LG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~ 261 (423)
T 3mvd_K 185 ASGADHLVILTTAGKVFTVGCAEQGQ---LGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQT 261 (423)
T ss_dssp EECSSEEEEEETTSCEEEEECCTTST---TSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTT
T ss_pred ecCCCeEEEEecCCeEEEeeCCcCCc---cCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCC
Confidence 99999999999999997766544433 33221 11112222222344566777777775 68
Q ss_pred CccCCcccccCC
Q 026784 220 DEFDCDDDTRNG 231 (233)
Q Consensus 220 ~~~~~~~~~~~~ 231 (233)
+++|+||.+..|
T Consensus 262 g~v~~wG~n~~g 273 (423)
T 3mvd_K 262 QVIWATGLNNFK 273 (423)
T ss_dssp CCEEEEEECTTC
T ss_pred CeEEEEeCCCCC
Confidence 999999988655
No 6
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-39 Score=287.92 Aligned_cols=217 Identities=20% Similarity=0.261 Sum_probs=168.9
Q ss_pred CCCcEEEEeC--CCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCC
Q 026784 1 MHLDIYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78 (233)
Q Consensus 1 ~~G~v~~wG~--n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~ 78 (233)
.+|+||+||. |.+||||.+.... .....|.+++.+.+.+|++|+||.+|++||+++|+||+||.|.+||||.+....
T Consensus 165 ~~G~vy~wG~n~~~~GqLG~~~~~~-~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 243 (473)
T 3of7_A 165 SNGEVYAWGTFRCNEGILGFYQDKI-KIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMER 243 (473)
T ss_dssp TTSCEEEEECEEETTEEEESBTTTB-SCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCCGG
T ss_pred CCCeEEEeeCCcCCCCccCCCCCCC-ccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCCCCCCCcccc
Confidence 3799999998 6899999855322 456789999999988999999999999999999999999999999999986543
Q ss_pred CcccCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCC----ccccCeeccCCCC-C
Q 026784 79 SFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST----YAWYPSPVDWCVG-E 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~----~~~~p~~v~~~~~-~ 153 (233)
. ......|..+...+|++|+||.+|++||+++|+||+||.|.+||||.+... ....|++|..+.. +
T Consensus 244 ~---------~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~~ 314 (473)
T 3of7_A 244 F---------RLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVV 314 (473)
T ss_dssp G---------TTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTCC
T ss_pred c---------cccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCcc
Confidence 2 111234544445789999999999999999999999999999999998653 4567888886654 8
Q ss_pred EEEEeccCCceEEEEcCCCceeeEEeeeccccccCCCc-------------------chhhhhhhcCcHHHHHHHHHHHH
Q 026784 154 VRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNAS-------------------EIEDVASRTGSEALARLCERLRE 214 (233)
Q Consensus 154 i~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~cg~~~~ 214 (233)
|++|+||.+|+++|+++|+||.||....++ ++... .+..+.. . ..+..+.||..+.
T Consensus 315 i~~ia~G~~hs~~lt~~G~v~~wG~n~~Gq---LG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~-~-~~v~~Ia~G~~hs 389 (473)
T 3of7_A 315 IRSIAAGEHHSLILSQDGDLYSCGRLDMFE---VGIPKDNLPEYTYKDVHGKARAVPLPTKLNN-V-PKFKSVAAGSHHS 389 (473)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEEECTTCT---TCCCGGGCCTTCEECTTSCEEEEEEEEECCS-S-CCEEEEEECSSEE
T ss_pred EEEEEeCCCeEEEEeCCCeEEEEECCCCCc---cCCCccccccccccccCCceeeeccCcccCC-C-CceEEEEeCCCeE
Confidence 999999999999999999997776644433 33211 0111111 1 0355678888777
Q ss_pred hhh-cCCccCCcccccCCC
Q 026784 215 HLL-HGDEFDCDDDTRNGN 232 (233)
Q Consensus 215 ~~~-~~~~~~~~~~~~~~~ 232 (233)
+++ +.+++|+||.+++|.
T Consensus 390 ~al~~~G~vy~wG~n~~Gq 408 (473)
T 3of7_A 390 VAVAQNGIAYSWGFGETYA 408 (473)
T ss_dssp EEEETTSCEEEEECCTTCT
T ss_pred EEEeCCCcEEEeeCCCCCC
Confidence 775 467899999998763
No 7
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-39 Score=287.32 Aligned_cols=228 Identities=20% Similarity=0.229 Sum_probs=166.0
Q ss_pred CCCcEEEEeCCCCCCcCCCCccCCCcccCCeEeecc--CCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCC
Q 026784 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78 (233)
Q Consensus 1 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l--~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~ 78 (233)
.+|+||+||.|.+||||++..........|++++.+ .+.+|++|+||..|++||+++|+||+||.|.+||||.+....
T Consensus 27 ~~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~ 106 (473)
T 3of7_A 27 QPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNA 106 (473)
T ss_dssp SCCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC--
T ss_pred CCccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCccc
Confidence 379999999999999999986433456778887776 466899999999999999999999999999999999987654
Q ss_pred CcccCCCC----------CCccccccCeee---------cCCCeEEEecCCceEEEEEcCCcEEEeeC--CCCCCCCCCC
Q 026784 79 SFSFIPNE----------SDTYFRNIPILV---------VPNGVQLVACGHSHTLVYMRDGKIHGWGY--NSYGQAANEK 137 (233)
Q Consensus 79 ~~~~~~~~----------~~~~~~~~p~~~---------~~~~i~~i~~G~~hs~~L~~~G~v~~wG~--n~~gqLg~~~ 137 (233)
...+.... ........|..+ ...+|++|+||..|++||+++|+||+||. |.+||||.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~ 186 (473)
T 3of7_A 107 KEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQ 186 (473)
T ss_dssp -------------------CCHHHHSCEECCGGGCHHHHTTCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBT
T ss_pred ccccccccccccCccccccccccccCceecccccCCcccCCCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCC
Confidence 21000000 000012233333 24789999999999999999999999998 6899999854
Q ss_pred C--CccccCeeccCCCC-CEEEEeccCCceEEEEcCCCceeeEEeeeccccccCCCcchh-----hhhhhcC-cHHHHHH
Q 026784 138 S--TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNASEIE-----DVASRTG-SEALARL 208 (233)
Q Consensus 138 ~--~~~~~p~~v~~~~~-~i~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~ 208 (233)
. .....|++|+.+.. +|++|+||..|++||+++|+||.||....+ +++....-. ....... ..+.++.
T Consensus 187 ~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~G---qLG~~~~~~~~~~~~~p~~~~~~~v~~Ia 263 (473)
T 3of7_A 187 DKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQN---QLGRKVMERFRLKTLDPRPFGLRHVKYIA 263 (473)
T ss_dssp TTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEEEECCTTS---TTSSCCCGGGTTTTCSCEECSCCSEEEEE
T ss_pred CCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCC---CCCCCccccccccccCceecCCcceEEEe
Confidence 3 46678899887665 799999999999999999999666654443 333221100 0000000 2355678
Q ss_pred HHHHHHhhh-cCCccCCcccccCC
Q 026784 209 CERLREHLL-HGDEFDCDDDTRNG 231 (233)
Q Consensus 209 cg~~~~~~~-~~~~~~~~~~~~~~ 231 (233)
||..+.+++ +.+++|+||.++.|
T Consensus 264 ~G~~hs~alt~~G~v~~wG~n~~G 287 (473)
T 3of7_A 264 SGENHCFALTKDNKLVSWGLNQFG 287 (473)
T ss_dssp ECSSEEEEEETTSCEEEEEECTTS
T ss_pred cCCCeEEEEecCCCEEEeCCCCCC
Confidence 888887775 56799999998765
No 8
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=1.2e-38 Score=279.15 Aligned_cols=216 Identities=19% Similarity=0.221 Sum_probs=161.5
Q ss_pred CCCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeC--CCCCccCCCCCCC
Q 026784 1 MHLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGG--CQAGQLGLGPQTR 78 (233)
Q Consensus 1 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~--n~~GqlG~~~~~~ 78 (233)
.+|+||+||.|.+||||.+.... .....|.++. +.. +|++|+||.+|+++|+++|+||+||. |.+||||.+....
T Consensus 76 ~~G~v~~wG~n~~GqLG~~~~~~-~~~~~P~~v~-l~~-~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~ 152 (413)
T 1a12_A 76 KSGQVYSFGCNDEGALGRDTSVE-GSEMVPGKVE-LQE-KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK 152 (413)
T ss_dssp TTSCEEEEECCTTSTTCSCCCST-TGGGSCEECC-CCS-CEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTB
T ss_pred CCCCEEEEECCCCCCCCCCCCCC-ccccCCeEec-CCC-cEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccc
Confidence 47999999999999999987532 3466888885 433 79999999999999999999999999 9999999876543
Q ss_pred CcccCCCCCCccccccCeee-cCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCC-----------ccccCee
Q 026784 79 SFSFIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKST-----------YAWYPSP 146 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~p~~~-~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~-----------~~~~p~~ 146 (233)
. ...|..+ ...+|++|+||.+|+++|+++|+||+||.|.+||||.+... ....|++
T Consensus 153 ~------------~~~P~~v~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~ 220 (413)
T 1a12_A 153 K------------SMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 220 (413)
T ss_dssp C------------EEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEE
T ss_pred c------------ccCCEEecCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCce
Confidence 2 1223333 35789999999999999999999999999999999987532 2357877
Q ss_pred ccCC------CCCEEEEeccCCceEEEEcCCCceeeEEeeeccccccCC--CcchhhhhhhcC--cHHHHHHHHHHHHhh
Q 026784 147 VDWC------VGEVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSN--ASEIEDVASRTG--SEALARLCERLREHL 216 (233)
Q Consensus 147 v~~~------~~~i~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~cg~~~~~~ 216 (233)
+... ..+|++|+||.+|+++|+++|+||.||....++.+.-.. ...+..+..... ..++++.|+..+.++
T Consensus 221 v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~hs~a 300 (413)
T 1a12_A 221 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVC 300 (413)
T ss_dssp CCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEE
T ss_pred EeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccceEEE
Confidence 7642 248999999999999999999997766544433221110 011122222222 225557788777776
Q ss_pred -hcCCccCCcccccCC
Q 026784 217 -LHGDEFDCDDDTRNG 231 (233)
Q Consensus 217 -~~~~~~~~~~~~~~~ 231 (233)
.+.+++|+||.++.|
T Consensus 301 l~~~G~v~~wG~n~~G 316 (413)
T 1a12_A 301 MDSEGKAYSLGRAEYG 316 (413)
T ss_dssp EETTSCEEEEECCGGG
T ss_pred EeCCCCEEEeeCCCCC
Confidence 456899999988654
No 9
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=3.7e-39 Score=282.42 Aligned_cols=220 Identities=18% Similarity=0.194 Sum_probs=164.1
Q ss_pred CCCcEEEEeC--CCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCC
Q 026784 1 MHLDIYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78 (233)
Q Consensus 1 ~~G~v~~wG~--n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~ 78 (233)
.+|+||+||. |.+||||.+... .....|.++ +...+|++|+||.+|+++|+++|+||+||.|.+||||.+....
T Consensus 128 ~~G~v~~wG~~~n~~GqlG~~~~~--~~~~~P~~v--~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 203 (413)
T 1a12_A 128 DDGRVFLWGSFRDNNGVIGLLEPM--KKSMVPVQV--QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELF 203 (413)
T ss_dssp TTSCEEEEECEEETTEEEESSBBT--BCEEEEEEE--CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGT
T ss_pred CCCcEEEeeCCcCCCCccCcCCcc--ccccCCEEe--cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCcccc
Confidence 4799999999 999999988653 234457777 4556899999999999999999999999999999999875422
Q ss_pred CcccCCCCCCccccccCeee--------cCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCC
Q 026784 79 SFSFIPNESDTYFRNIPILV--------VPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC 150 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~p~~~--------~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~ 150 (233)
.....+ ........|..+ ...+|++|+||.+|+++|+++|+||+||.|.+||||.+.......|++|+.+
T Consensus 204 ~~~~~~--~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l 281 (413)
T 1a12_A 204 ANRGGR--QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSF 281 (413)
T ss_dssp SSSCGG--GGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGG
T ss_pred cccccc--ccccccccCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhc
Confidence 100000 000011223222 2367999999999999999999999999999999999998888999999866
Q ss_pred CC---CEEEEeccCCceEEEEcCCCceeeEEeeeccccccCCCc------chhhhhhhcCcHHHHHHHHHHHHhh-hcCC
Q 026784 151 VG---EVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNAS------EIEDVASRTGSEALARLCERLREHL-LHGD 220 (233)
Q Consensus 151 ~~---~i~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~cg~~~~~~-~~~~ 220 (233)
.. +|++|+||.+|+++|+++|+||.||....+ +++... .+..+.... .+.++.|+..+.++ .+++
T Consensus 282 ~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~G---qLG~g~~~~~~~~P~~v~~l~--~v~~v~~G~~hs~alt~~G 356 (413)
T 1a12_A 282 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYG---RLGLGEGAEEKSIPTLISRLP--AVSSVACGASVGYAVTKDG 356 (413)
T ss_dssp CCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGG---TTCSCTTCCCEEEEEECCSSS--SEEEEEECSSEEEEEETTS
T ss_pred cCCCceEEEEecccceEEEEeCCCCEEEeeCCCCC---ccCCCCCCccccCCEEecccC--ceeEEEECcceEEEEeCCC
Confidence 53 699999999999999999999766654443 333221 111222111 35567788877776 5567
Q ss_pred ccCCcccccCC
Q 026784 221 EFDCDDDTRNG 231 (233)
Q Consensus 221 ~~~~~~~~~~~ 231 (233)
++|+||.+++|
T Consensus 357 ~v~~wG~n~~g 367 (413)
T 1a12_A 357 RVFAWGMGTNY 367 (413)
T ss_dssp CEEEEECCTTS
T ss_pred CEEEecCCCCC
Confidence 99999999876
No 10
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=3.1e-37 Score=270.84 Aligned_cols=219 Identities=17% Similarity=0.219 Sum_probs=161.6
Q ss_pred CCCcEEEEeC--CCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCC
Q 026784 1 MHLDIYTWGL--GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTR 78 (233)
Q Consensus 1 ~~G~v~~wG~--n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~ 78 (233)
.+|+||+||. |.+||||.+... .. |.++..+.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+....
T Consensus 144 ~~G~v~~wG~~~n~~GqlG~~~~~---~~--~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 218 (423)
T 3mvd_K 144 EDGRVFAWGSFRDSHGNMGLTIDG---NK--RTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERS 218 (423)
T ss_dssp TTSCEEEEECEECSSSEEESBTTB---CE--EEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTT
T ss_pred CCCeEEEEeCCCCCCCCcCcCCCC---CC--ceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccc
Confidence 4899999999 999999997653 33 4444456677899999999999999999999999999999999987654
Q ss_pred CcccCCCCCCccccccCeeec---CCCeEEEecCCceEEEE-EcCCcEEEeeCCCCCCCCCCCC--CccccCeeccCCCC
Q 026784 79 SFSFIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY-MRDGKIHGWGYNSYGQAANEKS--TYAWYPSPVDWCVG 152 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~p~~~~---~~~i~~i~~G~~hs~~L-~~~G~v~~wG~n~~gqLg~~~~--~~~~~p~~v~~~~~ 152 (233)
..... .........|..+. ..+|++|+||..|++++ +++|+||+||.|.+||||.+.. .....|.++. ..
T Consensus 219 ~~~~~--~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~--~~ 294 (423)
T 3mvd_K 219 ISGEG--RRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTE--LK 294 (423)
T ss_dssp TTSCS--TTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEEC--CC
T ss_pred ccccc--ccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcC--CC
Confidence 31111 11111223444432 46799999999999999 5999999999999999999654 3444566555 45
Q ss_pred CEEEEeccCCceEEEEcCCCceeeEEeeeccccccCCCc------chhhhhhhcCcHHHHHHHHHHHHhhh-cCCccCCc
Q 026784 153 EVRKLAAGGGHSAVLTDACSLKELCEFRLAESVTLSNAS------EIEDVASRTGSEALARLCERLREHLL-HGDEFDCD 225 (233)
Q Consensus 153 ~i~~i~~G~~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~cg~~~~~~~-~~~~~~~~ 225 (233)
+|++|+||.+|+++|+++|+||.||....+ +++... .+..+..... .++++.|+..+..++ +++++|+|
T Consensus 295 ~v~~ia~G~~ht~alt~~G~v~~wG~n~~G---qLG~g~~~~~~~~p~~v~~l~~-~v~~ia~G~~hs~alt~~G~v~~w 370 (423)
T 3mvd_K 295 DIRHIAGGQHHTVILTTDLKCSVVGRPEYG---RLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSW 370 (423)
T ss_dssp SEEEEEECSSEEEEEETTCCEEEEECCGGG---TTCSSSCCSCEEEEEECTTCCS-CEEEEEEETTEEEEEETTSCEEEE
T ss_pred CeEEEEcccCeEEEEeCCCcEEEEECCCCC---CCCCCCccccccCceEeccCCC-CEEEEEcCCCeEEEEcCCCCEEEE
Confidence 899999999999999999999766654443 333222 1122222222 466688988887775 45789999
Q ss_pred ccccCCC
Q 026784 226 DDTRNGN 232 (233)
Q Consensus 226 ~~~~~~~ 232 (233)
|++++|.
T Consensus 371 G~n~~Gq 377 (423)
T 3mvd_K 371 GSGVNNQ 377 (423)
T ss_dssp ECCTTSC
T ss_pred CCCCCCC
Confidence 9998763
No 11
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=5.2e-34 Score=237.97 Aligned_cols=169 Identities=21% Similarity=0.260 Sum_probs=125.3
Q ss_pred CCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcc
Q 026784 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81 (233)
Q Consensus 2 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~ 81 (233)
||+||+||.|.+||||++ .++. .+|++|+||.+|+++|+ +|+||+||.|.+||||...
T Consensus 80 ~G~v~~wG~n~~Gqlg~P-----------~~~~----~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~------ 137 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVP-----------AEAR----SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA------ 137 (282)
T ss_dssp TTEEEEEECCTTSTTCCC-----------GGGS----SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG------
T ss_pred CCEEEEeeCCCCCCCCCC-----------cccC----CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc------
Confidence 567777777777777642 2221 25888888888888888 8888888888888886321
Q ss_pred cCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCCCEEEEeccC
Q 026784 82 FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i~~G~ 161 (233)
+ ...+|++|+||..|+++|+ +|+||+||.|.+|||+. |.++ ..+|++|+||.
T Consensus 138 -------------~---~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~--------p~~~---~~~v~~i~~G~ 189 (282)
T 3qhy_B 138 -------------E---AQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTV--------PAEA---QSGVDDVAGGI 189 (282)
T ss_dssp -------------G---GGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSC--------CGGG---GSSEEEEEECS
T ss_pred -------------c---CCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCC--------ceec---CCCeEEEEecC
Confidence 1 1256999999999999999 89999999999999973 3333 24799999999
Q ss_pred CceEEEEcCCCceeeEEeeeccccccCCCcchhhhhhhcCcHHHHHHHHHHHHhhhcCCccCCcccccCC
Q 026784 162 GHSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRNG 231 (233)
Q Consensus 162 ~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~cg~~~~~~~~~~~~~~~~~~~~~ 231 (233)
+|+++| ++|++|.| |.+...+++.+... . ..+.++.|+..+..++.++++|+||++++|
T Consensus 190 ~hs~al-~~G~v~~w---G~n~~gqlg~p~~~---~----~~v~~i~~G~~h~~al~~g~v~~wG~n~~g 248 (282)
T 3qhy_B 190 FHSLAL-KDGKVIAW---GDNRYKQTTVPTEA---L----SGVSAIASGEWYSLALKNGKVIAWGSSRTA 248 (282)
T ss_dssp SEEEEE-ETTEEEEE---ECCTTSTTCCCGGG---G----SSCCEEEECSSCEEEEETTEEEEESTTCCC
T ss_pred CEEEEE-ECCeEEEE---ECCCCCCCCCCccc---C----CCceEEEcCCCEEEEEECCEEEEecCCCCc
Confidence 999999 89999555 45555555544321 1 124457788878877668999999999876
No 12
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=4.8e-34 Score=238.17 Aligned_cols=170 Identities=22% Similarity=0.260 Sum_probs=134.7
Q ss_pred CCcEEEEeCCCCCCcCCCCccCCCcccCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcc
Q 026784 2 HLDIYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFS 81 (233)
Q Consensus 2 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~ 81 (233)
||+||+||.|.+||||.+.. . ..+|++|+||.+|+++|+ +|+||+||.|.+||||...
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~-------------~--~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~------ 98 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAA-------------T--QSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPA------ 98 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGG-------------G--GSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCG------
T ss_pred CCEEEEEeCCCCCCCCCCcc-------------C--CCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCc------
Confidence 79999999999999995321 1 126999999999999996 9999999999999998521
Q ss_pred cCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCCCEEEEeccC
Q 026784 82 FIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i~~G~ 161 (233)
.+ ..+|++|+||.+|+++|+ +|+||+||.|.+||||.. .+. ..+|++|+||.
T Consensus 99 -----------~~-----~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~--------~~~---~~~i~~i~~G~ 150 (282)
T 3qhy_B 99 -----------EA-----RSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP--------AEA---QSGVTALDGGV 150 (282)
T ss_dssp -----------GG-----SSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC--------GGG---GSSEEEEEECS
T ss_pred -----------cc-----CCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC--------ccC---CCCeEEEEccc
Confidence 11 246999999999999999 999999999999999842 111 23799999999
Q ss_pred CceEEEEcCCCceeeEEeeeccccccCCCcchhhhhhhcCcHHHHHHHHHHHHhhhcCCccCCcccccCCC
Q 026784 162 GHSAVLTDACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHLLHGDEFDCDDDTRNGN 232 (233)
Q Consensus 162 ~hs~~l~~~g~v~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~cg~~~~~~~~~~~~~~~~~~~~~~ 232 (233)
.|+++|+ +|++|.| |.+...+++.+..+ ..++.++.|+..+..+++++++|+||.+..|.
T Consensus 151 ~~~~~l~-~G~v~~w---G~n~~gqlg~p~~~-------~~~v~~i~~G~~hs~al~~G~v~~wG~n~~gq 210 (282)
T 3qhy_B 151 YTALAVK-NGGVIAW---GDNYFGQTTVPAEA-------QSGVDDVAGGIFHSLALKDGKVIAWGDNRYKQ 210 (282)
T ss_dssp SEEEEEE-TTEEEEE---ECCTTSTTSCCGGG-------GSSEEEEEECSSEEEEEETTEEEEEECCTTST
T ss_pred CEEEEEE-CCEEEEe---cCCCCCCCCCceec-------CCCeEEEEecCCEEEEEECCeEEEEECCCCCC
Confidence 9999999 8998555 55555555544332 12244577888888888899999999987763
No 13
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=97.46 E-value=0.00025 Score=56.83 Aligned_cols=71 Identities=18% Similarity=0.224 Sum_probs=60.0
Q ss_pred cEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcC
Q 026784 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119 (233)
Q Consensus 40 ~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~ 119 (233)
.|..|+--..|++++--+++++.+|+++.|||-..... .+..++++|.++++-+..-
T Consensus 310 ~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~ta-----------------------gPfla~~AG~~fTVTVn~~ 366 (400)
T 4gbf_A 310 PIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDDHA-----------------------GPYIQLAAGHNFTVTVNTL 366 (400)
T ss_dssp CCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCGGG-----------------------CCEEEEEECSSEEEEEETT
T ss_pred ccccccccccceEEEecCceeEEeccCCCCceecCCCc-----------------------chHHhHhccCCeEEEEece
Confidence 57888888999999999999999999999998664432 2378899999999999999
Q ss_pred CcEEEeeCCCCCCC
Q 026784 120 GKIHGWGYNSYGQA 133 (233)
Q Consensus 120 G~v~~wG~n~~gqL 133 (233)
..|--||+.....|
T Consensus 367 nyv~FWGDSPDNSL 380 (400)
T 4gbf_A 367 NQVMFWGDSPDNSL 380 (400)
T ss_dssp CCEEEEECCTTSTT
T ss_pred eeEEEecCCCCcce
Confidence 99999998665554
No 14
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=95.99 E-value=0.0079 Score=48.26 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=56.6
Q ss_pred CCeEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCCCEEEEeccCCceEEEEcCCCceeeEE
Q 026784 101 NGVQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCE 178 (233)
Q Consensus 101 ~~i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i~~G~~hs~~l~~~g~v~~~g~ 178 (233)
..|.+|+--..|.+++--+++++.+|+|+.||+-... ...+..++.+|..+++-+..-+.+-.||.
T Consensus 309 n~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~------------tagPfla~~AG~~fTVTVn~~nyv~FWGD 374 (400)
T 4gbf_A 309 NPIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDD------------HAGPYIQLAAGHNFTVTVNTLNQVMFWGD 374 (400)
T ss_dssp SCCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCG------------GGCCEEEEEECSSEEEEEETTCCEEEEEC
T ss_pred CccccccccccceEEEecCceeEEeccCCCCceecCC------------CcchHHhHhccCCeEEEEeceeeEEEecC
Confidence 5588899999999999999999999999999986543 23489999999999999999998877775
No 15
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=64.00 E-value=38 Score=28.55 Aligned_cols=74 Identities=8% Similarity=0.056 Sum_probs=45.9
Q ss_pred cCCeEeeccCCCcEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEe
Q 026784 28 LLPRRVVALDGIFIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVA 107 (233)
Q Consensus 28 ~~p~~v~~l~~~~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~ 107 (233)
..|.....++. |.+|++ +...+++..+|.|..|=-...-+.- ..+ .....+.++.
T Consensus 79 ~~~~~~~~lp~--V~~l~f-d~~~L~v~~~~~l~v~dv~sl~~~~--------------------~~~--~~~~~v~~i~ 133 (388)
T 1xip_A 79 LTFKWEKEIPD--VIFVCF-HGDQVLVSTRNALYSLDLEELSEFR--------------------TVT--SFEKPVFQLK 133 (388)
T ss_dssp CCCSEEEECTT--EEEEEE-ETTEEEEEESSEEEEEESSSTTCEE--------------------EEE--ECSSCEEEEE
T ss_pred ccceEEeeCCC--eeEEEE-CCCEEEEEcCCcEEEEEchhhhccC--------------------ccc--eeecceeeEE
Confidence 34544444555 899999 7788888888999988543322110 000 0112345555
Q ss_pred cCCceEEEEEcCCcEEEee
Q 026784 108 CGHSHTLVYMRDGKIHGWG 126 (233)
Q Consensus 108 ~G~~hs~~L~~~G~v~~wG 126 (233)
+-....++++++|.|+.|=
T Consensus 134 ~~~p~~av~~~dG~L~v~d 152 (388)
T 1xip_A 134 NVNNTLVILNSVNDLSALD 152 (388)
T ss_dssp ECSSEEEEEETTSEEEEEE
T ss_pred ecCCCEEEEECCCCEEEEE
Confidence 5554577788999999993
No 16
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=54.20 E-value=91 Score=25.69 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=37.6
Q ss_pred cEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCee-ecCCCeEEEecCCceEEEEEc
Q 026784 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPIL-VVPNGVQLVACGHSHTLVYMR 118 (233)
Q Consensus 40 ~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~i~~i~~G~~hs~~L~~ 118 (233)
.|..++......+.-..+|.|..|-......+ ...... .....|..++....+.+.-..
T Consensus 215 ~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~~~l~s~~~ 274 (435)
T 1p22_A 215 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI--------------------TLRRVLVGHRAAVNVVDFDDKYIVSASG 274 (435)
T ss_dssp CEEEEECCTTEEEEEETTSCEEEEECSSSSCC--------------------EEEEEECCCSSCEEEEEEETTEEEEEET
T ss_pred cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc--------------------eeeeEecCCCCcEEEEEeCCCEEEEEeC
Confidence 46666666666666667777777743221100 000000 012346666666666667777
Q ss_pred CCcEEEeeC
Q 026784 119 DGKIHGWGY 127 (233)
Q Consensus 119 ~G~v~~wG~ 127 (233)
+|.|..|=.
T Consensus 275 dg~i~vwd~ 283 (435)
T 1p22_A 275 DRTIKVWNT 283 (435)
T ss_dssp TSEEEEEET
T ss_pred CCeEEEEEC
Confidence 888888843
No 17
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=39.47 E-value=1.6e+02 Score=24.18 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=61.7
Q ss_pred cEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcC
Q 026784 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119 (233)
Q Consensus 40 ~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~ 119 (233)
.|..++....+.+.-..||.|..|-....-.+ ..+ ......|..++......+.-..+
T Consensus 258 ~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------------------~~~--~~~~~~v~~~~~~~~~l~~g~~d 315 (435)
T 1p22_A 258 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV--------------------RTL--NGHKRGIACLQYRDRLVVSGSSD 315 (435)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTTCCEE--------------------EEE--ECCSSCEEEEEEETTEEEEEETT
T ss_pred cEEEEEeCCCEEEEEeCCCeEEEEECCcCcEE--------------------EEE--cCCCCcEEEEEeCCCEEEEEeCC
Confidence 57777776677777778899998854321100 000 00124466676666777777889
Q ss_pred CcEEEeeCCCCCCCCCCCCCccccCeeccCCCCCEEEEeccCCceEEEEcCCCceee
Q 026784 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 176 (233)
Q Consensus 120 G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i~~G~~hs~~l~~~g~v~~~ 176 (233)
|.|..|=... ++ ....+......|..++.-..+.+.-..||.+..|
T Consensus 316 g~i~iwd~~~-~~----------~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vw 361 (435)
T 1p22_A 316 NTIRLWDIEC-GA----------CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW 361 (435)
T ss_dssp SCEEEEETTT-CC----------EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEE
T ss_pred CeEEEEECCC-CC----------EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEE
Confidence 9999995432 11 1112222233677777766666667778887444
No 18
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=36.92 E-value=1.7e+02 Score=23.70 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=37.5
Q ss_pred EEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeee--cCCCeEEEecC--CceEEEE
Q 026784 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILV--VPNGVQLVACG--HSHTLVY 116 (233)
Q Consensus 41 i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~i~~i~~G--~~hs~~L 116 (233)
+..++-...+.++...+|.|+.|-....-.. .... ....|..|+-- ..+.++-
T Consensus 96 ~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~-----------------------~~~~~~~~~~v~~v~~s~~~~~l~~~ 152 (401)
T 4aez_A 96 LNLLDWSNLNVVAVALERNVYVWNADSGSVS-----------------------ALAETDESTYVASVKWSHDGSFLSVG 152 (401)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTCCEE-----------------------EEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred EEEEeecCCCEEEEECCCeEEEeeCCCCcEe-----------------------EeeecCCCCCEEEEEECCCCCEEEEE
Confidence 3346656677888889999999964321100 0000 12345555543 3445555
Q ss_pred EcCCcEEEeeC
Q 026784 117 MRDGKIHGWGY 127 (233)
Q Consensus 117 ~~~G~v~~wG~ 127 (233)
..+|.|..|=.
T Consensus 153 ~~dg~i~iwd~ 163 (401)
T 4aez_A 153 LGNGLVDIYDV 163 (401)
T ss_dssp ETTSCEEEEET
T ss_pred CCCCeEEEEEC
Confidence 67899999954
No 19
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=36.90 E-value=78 Score=26.62 Aligned_cols=61 Identities=13% Similarity=0.115 Sum_probs=36.9
Q ss_pred eEEEecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCCCCCEEEEeccCCceEEEEcCCCcee
Q 026784 103 VQLVACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKE 175 (233)
Q Consensus 103 i~~i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~~~~i~~i~~G~~hs~~l~~~g~v~~ 175 (233)
|.+|++ ....+++.++|.|..|=-...-+ ...++....++.++.+-....++++.||.++.
T Consensus 90 V~~l~f-d~~~L~v~~~~~l~v~dv~sl~~-----------~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v 150 (388)
T 1xip_A 90 VIFVCF-HGDQVLVSTRNALYSLDLEELSE-----------FRTVTSFEKPVFQLKNVNNTLVILNSVNDLSA 150 (388)
T ss_dssp EEEEEE-ETTEEEEEESSEEEEEESSSTTC-----------EEEEEECSSCEEEEEECSSEEEEEETTSEEEE
T ss_pred eeEEEE-CCCEEEEEcCCcEEEEEchhhhc-----------cCccceeecceeeEEecCCCEEEEECCCCEEE
Confidence 999999 77788888999999994332211 11111222345555555445666777777743
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=34.16 E-value=1.9e+02 Score=23.63 Aligned_cols=65 Identities=14% Similarity=0.162 Sum_probs=36.9
Q ss_pred EEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcCC
Q 026784 41 IKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 120 (233)
Q Consensus 41 i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~G 120 (233)
+..++.-...-+.-..||.|..|-....-.+- .++ .....|..++......+.-..||
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~--------------------~~~--~h~~~v~~~~~~~~~l~s~~~dg 179 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLR--------------------TLV--GHTGGVWSSQMRDNIIISGSTDR 179 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEE--------------------ECC--CCSSCEEEEEEETTEEEEEETTS
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEE--------------------EEc--CCCCCEEEEEecCCEEEEEeCCC
Confidence 45555556666667788999999643211110 000 01233555555555666667788
Q ss_pred cEEEeeC
Q 026784 121 KIHGWGY 127 (233)
Q Consensus 121 ~v~~wG~ 127 (233)
.|+.|=.
T Consensus 180 ~i~vwd~ 186 (445)
T 2ovr_B 180 TLKVWNA 186 (445)
T ss_dssp CEEEEET
T ss_pred eEEEEEC
Confidence 8888843
No 21
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=32.72 E-value=1.8e+02 Score=23.30 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=43.3
Q ss_pred EEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEecC-----CceEEEEE
Q 026784 43 DVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACG-----HSHTLVYM 117 (233)
Q Consensus 43 ~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G-----~~hs~~L~ 117 (233)
.++....+.+++|+.|++|..-...--..+..... ......++ +..+++|+.+... ..+.+++|
T Consensus 53 ~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G----------~~i~~~l~-l~~~e~i~~~~~~~~~~~~~~ll~~T 121 (312)
T 1suu_A 53 LCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG----------QNISELIN-LGDQEEILTIKNSKDLTDDAYLLLTT 121 (312)
T ss_dssp EEEETTCEEEEEETTSEEEEEEGGGSCC-----------------CBGGGTSC-CCTTCCEEEEEEESCCCTTCEEEEEE
T ss_pred EEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCC----------cChhhccC-CCCCCEEEEEEEeccCCCCCEEEEEe
Confidence 35567788999999999998854321111111000 00111122 2245667777554 45688999
Q ss_pred cCCcEEEeeCCC
Q 026784 118 RDGKIHGWGYNS 129 (233)
Q Consensus 118 ~~G~v~~wG~n~ 129 (233)
++|.++-.-...
T Consensus 122 ~~G~~kr~~l~~ 133 (312)
T 1suu_A 122 ASGKIARFESTD 133 (312)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCeEEEEEHHH
Confidence 999998875443
No 22
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=30.95 E-value=85 Score=22.41 Aligned_cols=24 Identities=4% Similarity=-0.177 Sum_probs=17.8
Q ss_pred cEEEEEeC-CceeEEEEcCCcEEEe
Q 026784 40 FIKDVACG-GVHTCALTSKGALYAW 63 (233)
Q Consensus 40 ~i~~is~G-~~hs~~lt~~G~v~~w 63 (233)
.++.|-|= ..+-+++..+|+||+-
T Consensus 73 G~V~L~g~~sg~yL~mn~~G~l~Gs 97 (142)
T 3p6j_A 73 GEVLLKSTETGQYLRINPDGTVDGT 97 (142)
T ss_dssp TEEEEEETTTTEEEEECTTSBEEEE
T ss_pred CEEEEEEecCCEEEeECCCCCEeec
Confidence 36666664 4677888999999965
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=26.57 E-value=1.3e+02 Score=26.80 Aligned_cols=20 Identities=20% Similarity=0.066 Sum_probs=15.1
Q ss_pred CCceEEEEEcCCcEEEeeCC
Q 026784 109 GHSHTLVYMRDGKIHGWGYN 128 (233)
Q Consensus 109 G~~hs~~L~~~G~v~~wG~n 128 (233)
...|++++..+|++|++|-.
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~ 262 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGN 262 (656)
T ss_dssp CSSCEEEECTTSCEEEECSS
T ss_pred CccccccCCCCCCEEEeCCC
Confidence 34556777789999999954
No 24
>2z3g_A Blasticidin-S deaminase; hydrolase, cytidine deaminase family, zinc, tetramer; HET: TRE; 1.50A {Aspergillus terreus} SCOP: c.97.1.1 PDB: 1wn6_A* 1wn5_A* 2z3h_A* 2z3j_A 2z3i_A*
Probab=26.46 E-value=36 Score=23.90 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=14.0
Q ss_pred eEEEEcCCcEEEeeCCCC
Q 026784 51 TCALTSKGALYAWGGCQA 68 (233)
Q Consensus 51 s~~lt~~G~v~~wG~n~~ 68 (233)
++++++||++|. |.|..
T Consensus 31 Aal~~~dG~i~~-G~NvE 47 (130)
T 2z3g_A 31 SAALSSDGRIFT-GVNVY 47 (130)
T ss_dssp EEEEETTSCEEE-EECCC
T ss_pred EEEEecCCeEEE-Eeccc
Confidence 456789999996 99876
No 25
>2ftc_O L27MT, MRP-L27, mitochondrial 39S ribosomal protein L27; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_O
Probab=25.03 E-value=34 Score=21.28 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=17.1
Q ss_pred EEEEeCCceeEEEEcCCcEE
Q 026784 42 KDVACGGVHTCALTSKGALY 61 (233)
Q Consensus 42 ~~is~G~~hs~~lt~~G~v~ 61 (233)
..|-+|.+||++-..+|.|.
T Consensus 49 ~nVg~GkD~TLfAl~~G~V~ 68 (69)
T 2ftc_O 49 AHVGVGKNKCLYALEEGIVR 68 (69)
T ss_pred CCeeecCCCcEEEccceEEe
Confidence 35789999999999999874
No 26
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=24.80 E-value=2.8e+02 Score=22.56 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=58.6
Q ss_pred cEEEEEeCCceeEEEEcCCcEEEeeCCCCCccCCCCCCCCcccCCCCCCccccccCeeecCCCeEEEecCCceEEEEEcC
Q 026784 40 FIKDVACGGVHTCALTSKGALYAWGGCQAGQLGLGPQTRSFSFIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 119 (233)
Q Consensus 40 ~i~~is~G~~hs~~lt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~i~~G~~hs~~L~~~ 119 (233)
.|..++....+.+.-..+|.|..|-....-.+. .+. .....+..++......+.-..+
T Consensus 281 ~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--------------------~~~--~~~~~v~~~~~~~~~l~~~~~d 338 (445)
T 2ovr_B 281 RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH--------------------TLT--GHQSLTSGMELKDNILVSGNAD 338 (445)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEETTTCCEEE--------------------EEC--CCCSCEEEEEEETTEEEEEETT
T ss_pred ceEEEEECCCEEEEEeCCCeEEEEECCCCCEEE--------------------EEc--CCcccEEEEEEeCCEEEEEeCC
Confidence 577777766666667778888888543211100 000 0123355566556666777789
Q ss_pred CcEEEeeCCCCCCCCCCCCCccccCeeccC---CCCCEEEEeccCCceEEEEcCCCceee
Q 026784 120 GKIHGWGYNSYGQAANEKSTYAWYPSPVDW---CVGEVRKLAAGGGHSAVLTDACSLKEL 176 (233)
Q Consensus 120 G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~---~~~~i~~i~~G~~hs~~l~~~g~v~~~ 176 (233)
|.|..|=... ++ ....+.. ....|..++....+.++-..||.+..|
T Consensus 339 g~i~vwd~~~-~~----------~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 339 STVKIWDIKT-GQ----------CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387 (445)
T ss_dssp SCEEEEETTT-CC----------EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred CeEEEEECCC-Cc----------EEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEE
Confidence 9999995422 11 0111111 223677777766676777778877443
No 27
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=23.35 E-value=1.3e+02 Score=20.99 Aligned_cols=19 Identities=5% Similarity=-0.003 Sum_probs=13.9
Q ss_pred EeCCceeEEEEcCCcEEEe
Q 026784 45 ACGGVHTCALTSKGALYAW 63 (233)
Q Consensus 45 s~G~~hs~~lt~~G~v~~w 63 (233)
..-..+-+++..+|+||+-
T Consensus 54 g~~sg~yL~m~~~G~v~Gs 72 (132)
T 3q7x_A 54 STETGQFLRINPDGTVDGT 72 (132)
T ss_dssp ETTTCCEEEECTTSBEEEE
T ss_pred EEcccEEEEECCCCCEeec
Confidence 3345566788899999965
No 28
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=22.80 E-value=1.5e+02 Score=26.40 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=16.9
Q ss_pred CceEEE-EEcCCcEEEeeCCCCCC
Q 026784 110 HSHTLV-YMRDGKIHGWGYNSYGQ 132 (233)
Q Consensus 110 ~~hs~~-L~~~G~v~~wG~n~~gq 132 (233)
..|+++ |..+|+||+.|.+..+.
T Consensus 511 ~~hs~a~ll~dg~v~v~GG~~~~~ 534 (656)
T 1k3i_A 511 VYHSISLLLPDGRVFNGGGGLCGD 534 (656)
T ss_dssp CTTEEEEECTTSCEEEEECCCCTT
T ss_pred ccccHhhcCCCcEEEecCCCCCCC
Confidence 357644 55799999999876653
No 29
>2fr5_A Cytidine deaminase; tetrahydrouridine, protein-inhibitor COM alternate conformation of Arg68, hydrolase; HET: TYU; 1.48A {Mus musculus} SCOP: c.97.1.1 PDB: 1zab_A* 2fr6_A* 1mq0_A*
Probab=22.48 E-value=47 Score=23.88 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.3
Q ss_pred eEEEEcCCcEEEeeCCCC
Q 026784 51 TCALTSKGALYAWGGCQA 68 (233)
Q Consensus 51 s~~lt~~G~v~~wG~n~~ 68 (233)
++++++||++|. |.|..
T Consensus 40 Aal~~~dG~i~~-G~NvE 56 (146)
T 2fr5_A 40 AALLTGDGRIFS-GCNIE 56 (146)
T ss_dssp EEEEETTSCEEE-EECBC
T ss_pred EEEEeCCCcEEE-EEecc
Confidence 456779999995 98854
No 30
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=22.20 E-value=2.6e+02 Score=22.42 Aligned_cols=68 Identities=7% Similarity=0.038 Sum_probs=37.9
Q ss_pred EecCCceEEEEEcCCcEEEeeCCCCCCCCCCCCCccccCeeccCC-CCCEEEEecc-----CCceEEEEcCCCce
Q 026784 106 VACGHSHTLVYMRDGKIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAG-----GGHSAVLTDACSLK 174 (233)
Q Consensus 106 i~~G~~hs~~L~~~G~v~~wG~n~~gqLg~~~~~~~~~p~~v~~~-~~~i~~i~~G-----~~hs~~l~~~g~v~ 174 (233)
++...++.+++|+.|++|..=-..-...+....- .+....++.. .++|+.+... ..+.+++|++|.+.
T Consensus 54 ~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G-~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 54 CVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG-QNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEETTCEEEEEETTSEEEEEEGGGSCC--------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EECCCCEEEEEECCCeEEEEEHHHCCCCCccCCC-cChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 4566788999999999998854432222211100 1111122221 2367776654 34578889998873
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=20.96 E-value=2.1e+02 Score=21.53 Aligned_cols=24 Identities=4% Similarity=0.080 Sum_probs=10.6
Q ss_pred EEEEEeCCceeEEEEc--CCcEEEee
Q 026784 41 IKDVACGGVHTCALTS--KGALYAWG 64 (233)
Q Consensus 41 i~~is~G~~hs~~lt~--~G~v~~wG 64 (233)
+..|+.-..-.++++. +++|+.|-
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEc
Confidence 3444444333344432 45555554
No 32
>1r5t_A Cytidine deaminase; zinc dependent deaminase, RNA editing, apobec-1 related protein, hydrolase; 2.00A {Saccharomyces cerevisiae} SCOP: c.97.1.1
Probab=20.92 E-value=46 Score=23.77 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=13.0
Q ss_pred eEEEEcCCcEEEeeCCCC
Q 026784 51 TCALTSKGALYAWGGCQA 68 (233)
Q Consensus 51 s~~lt~~G~v~~wG~n~~ 68 (233)
.+++++||++|+ |.|..
T Consensus 36 AAl~~~dG~i~~-G~NvE 52 (142)
T 1r5t_A 36 CSILTNNDVIFT-GANVE 52 (142)
T ss_dssp EEEECTTSCEEE-EECBC
T ss_pred EEEEeCCCCEEE-EEeec
Confidence 456778999996 88744
Done!