Citrus Sinensis ID: 026788

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
Protein Sequence
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Secondary Structure (PSIPRED)
cccEEcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccHHHHHHHHHHcccccccEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKgpalvsmssssnlhnelrspqknwiIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAernpnswrlkpdtelIAIGCSAFFAVALRSLAHTwachkkgpvyvsmyKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSViwgqseeekmiddkdidslkssspkapllqtksifcrn
Flexible Loop (DISEMBL)
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDslkssspkapllqtksifcrn
Low Complexity Region (SEG)
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSeeekmiddkdidslkssspkapllQTKSIFCRN
Disordered region (IsUnstruct)
*************KSIGTMVSIAGALTVTLYKGPALV****************KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISOPRED)
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSM****************WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISEMBL)
********QSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Disordered Region (DISPRO)
*EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSS************KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS*********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	233	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.944	0.597	0.443	4e-50
Q94JU2	367	WAT1-related protein At3g	no	no	0.957	0.607	0.414	6e-47
F4KHA8	370	WAT1-related protein At5g	no	no	0.944	0.594	0.434	1e-46
F4JK59	347	WAT1-related protein At4g	no	no	0.871	0.585	0.443	7e-40
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.939	0.608	0.358	7e-37
Q945L4	339	WAT1-related protein At5g	no	no	0.892	0.613	0.397	4e-36
Q56X95	355	WAT1-related protein At3g	no	no	0.862	0.566	0.367	6e-36
Q9LRS5	353	WAT1-related protein At3g	no	no	0.935	0.617	0.356	1e-35
F4IYZ0	358	WAT1-related protein At3g	no	no	0.935	0.608	0.352	5e-35
F4I5D5	375	WAT1-related protein At1g	no	no	0.948	0.589	0.338	7e-33

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  197 bits (502), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 17/237 (7%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSS------SSNLHNELRSPQK 54
           ME++ LR  ++ AK IG ++SI+GAL V LYKGP +++ +S      +  LH +L S + 
Sbjct: 133 MEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIES 192

Query: 55  NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPN 114
           +WIIGGL+LA+  F +S+ YI+QT ++  YPEE+   F   +F T+ S  V L AE N  
Sbjct: 193 SWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLT 252

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
           SW LKPD  L AI  S  F     +L HTW  H KGPVY+S+++PL I  A+ MG   LG
Sbjct: 253 SWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLG 312

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 229
           D L+LGSV+G+ I+  GFY+VIWG++ E         D++K+   S ++PLL T  I
Sbjct: 313 DALHLGSVIGSMILCIGFYTVIWGKARE---------DTIKTVAGSEQSPLLLTHII 360

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  187 bits (474), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 148/239 (61%), Gaps = 16/239 (6%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-NLHNELRSPQKNWIIG 59
           ME +  +  SS+AK +GT+VSI GA  VTLY GP +++ S  S +L ++  +P  NWI+G
Sbjct: 125 MESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNP--NWILG 182

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRL 118
              LA   F + L YIVQT I+REYP E        + V+  + +V L  E N   +W++
Sbjct: 183 AGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKI 242

Query: 119 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 178
           KP+  L++I CS  F   + +  HTWA   KGP++V+M+KPL I  A+ MGV  L D+LY
Sbjct: 243 KPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLY 302

Query: 179 LGSVVGATIVAFGFYSVIWGQSEEEKMIDDK-----------DIDSLKSSSPKAPLLQT 226
           +GS++GAT++  GFY+V+WG+++E  +++D            D+DS  S S KAPLL++
Sbjct: 303 IGSLIGATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDS-PSGSQKAPLLES 360

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 149/237 (62%), Gaps = 17/237 (7%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGP------ALVSMSSSSNLHNELRSPQK 54
           ME++ LR  ++ AK IGT+VSI+GAL V LYKGP      +L   S + +L+  L S   
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDS 193

Query: 55  NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPN 114
           +WIIGGL+LA     +S+ YI+QT ++  YPEE+   F+  +  T+ S  V L AE++ N
Sbjct: 194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLN 253

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
           S+ LKP   L ++  S     +  S+ HTW  H KGPVY+S++KPL IV A+ MGV  LG
Sbjct: 254 SFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLG 313

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 229
           D LYLGSV+G+ I++ GFY+VIWG++ E         DS+K+   + ++PLL + +I
Sbjct: 314 DALYLGSVIGSLILSLGFYTVIWGKARE---------DSIKTVAGTEQSPLLPSHTI 361

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  163 bits (413), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 9/212 (4%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGG 60
           ME++ LR  ++ AK IGT+VSI+GAL + LYKGP L+  +S ++        + +WIIGG
Sbjct: 130 MEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF-------ESSWIIGG 182

Query: 61  LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 120
           L+L      LS+ +I+QT I+  YPEE+   F   +  T+ S  V L+ E++ NSW+LKP
Sbjct: 183 LLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKP 242

Query: 121 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 180
              L ++  S  F  +L S+ HTW  H KGPVY+S++KPL I  A+ M    LGDTL+LG
Sbjct: 243 GFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLG 302

Query: 181 SVVGATIVAFGFYSVIWGQSEEE--KMIDDKD 210
           SV+G+ I++FGFY+VIWG++ E+  K + D +
Sbjct: 303 SVIGSVILSFGFYTVIWGKAREDSTKTVSDSE 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  154 bits (388), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 15/234 (6%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKN 55
           MEK+  + +SSLAK +GT++S+ GAL V  Y GP +   SS   ++    SP       +
Sbjct: 130 MEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSD 189

Query: 56  WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
           W+IGG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++ + L+ E+N P+
Sbjct: 190 WLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPS 249

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
            W +  D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L 
Sbjct: 250 VWIIHFDITLITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 308

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLK-SSSPKAPLLQTK 227
           D+LYLG ++G  ++  GFY+V+WG++ EEK       D L  S   K PLL  +
Sbjct: 309 DSLYLGCLIGGILITLGFYAVMWGKANEEK-------DQLSFSEKEKTPLLLNR 355

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  151 bits (382), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 21/229 (9%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGG 60
           ME + L  +SS+AK +GT++SI GAL VTLY GP L  MSS S+           WIIGG
Sbjct: 126 MENISLGKKSSVAKVLGTILSIIGALVVTLYHGPML--MSSHSD-----------WIIGG 172

Query: 61  LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLK 119
            +LA     +S+ Y+V    +  YP  ++ T +  V + +    V+L+AE+ NP +W ++
Sbjct: 173 GLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIR 232

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
            D  LI +  +         + HTWA   KGPVY+SM+KPL I+ A +     LG++LYL
Sbjct: 233 FDITLITVVATGILNSGYYVI-HTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYL 291

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSP--KAPLLQT 226
           GSV+G  +++ GFY V+WG+++E+K+    DI     SSP   APLL  
Sbjct: 292 GSVMGGILISIGFYMVLWGKAKEDKV----DIIGAIESSPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  150 bits (379), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 127/212 (59%), Gaps = 11/212 (5%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQK------ 54
           MEK   + +SS+AK +GT+VS+ GAL V LY GP + + SS      +LR          
Sbjct: 126 MEKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPP--FPQLRQLLLPLSSSN 183

Query: 55  -NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN- 112
            +WIIGG +LA     + + +I+Q  I++ YP     +F   +  +I ++++ ++AE+N 
Sbjct: 184 SDWIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNN 243

Query: 113 PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTL 172
           P+ W +  D  L+ I     F     ++ H WA   KGPVY+++++PL I+ A+IMG   
Sbjct: 244 PSIWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIF 302

Query: 173 LGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK 204
           LGD+ YLGS+VG  +++ GFY+V+WG+++E K
Sbjct: 303 LGDSFYLGSLVGGILISLGFYTVMWGKAKEGK 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 135/230 (58%), Gaps = 12/230 (5%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-----LRSPQKN 55
           MEK+  + +SS+AK +GT++S+ GAL V LY GP +   SS   ++       L S   +
Sbjct: 127 MEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSD 186

Query: 56  WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
           W+IGG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++++ L+ E+N P+
Sbjct: 187 WLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPS 246

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
            W ++ D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++M    L 
Sbjct: 247 VWIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLN 305

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 224
           D+LYLG ++G  ++  GFY+V+WG++ EE     KD   L S   + PLL
Sbjct: 306 DSLYLGCLIGGLLITLGFYAVMWGKANEE-----KDQLLLVSGKERTPLL 350

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  147 bits (372), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 136/230 (59%), Gaps = 12/230 (5%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-----LRSPQKN 55
           MEK+  + +SS+AK +GT++S+ GA  V  Y GP +   SS   L+       L S + +
Sbjct: 127 MEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSD 186

Query: 56  WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
           W+IGG +L     F+S+ +I+QT I+REYPE    + +  + ++I ++++ L+ E+N P+
Sbjct: 187 WLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPS 246

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
            W +  D  L  I  +     ++  + H+WA   K P+Y++++KPL I+ A++MG   L 
Sbjct: 247 IWIIHFDITLFTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLN 305

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 224
           D+LYLG ++G  ++  GFY V+WG++ EEK   +K +    S   K PLL
Sbjct: 306 DSLYLGCLIGGILITLGFYVVMWGKANEEK---NKLLSF--SGKEKTPLL 350

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  140 bits (353), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 18/239 (7%)

Query: 3   KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQK-------- 54
           KLD R  S+ AK +GT+VS++GA    LYKGP  +  +SS++ +  L+S  K        
Sbjct: 130 KLDWRNTSTRAKLMGTIVSLSGAFVEELYKGP-FIRPASSASPNRFLKSVPKLLVYYNLP 188

Query: 55  -NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP 113
            NW +G + LA   F +SL  +VQT  +++YP  +       +  TIQ  + +L  ER+ 
Sbjct: 189 DNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDL 248

Query: 114 NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLL 173
           ++W+++P+ +L  I  +  F   +R+  H      KGP YV ++KP GI +A + G +  
Sbjct: 249 SAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFF 308

Query: 174 GDTLYLGSVVGATIVAFGFYSVIWGQ--SEEEKMIDDKDIDSLKS------SSPKAPLL 224
            ++L+ GSV+GA I   G+++V WGQ    EEK   +++  S+K+         K PLL
Sbjct: 309 VNSLHYGSVLGAAIAGVGYFTVSWGQLKESEEKQSSNEERKSIKTIHHRDEDEYKVPLL 367

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
255581154	354	Auxin-induced protein 5NG4, putative [Ri	0.974	0.641	0.593	3e-75
296086528	317	unnamed protein product [Vitis vinifera]	0.969	0.712	0.589	4e-73
359473431	348	PREDICTED: auxin-induced protein 5NG4-li	0.969	0.649	0.589	4e-73
225424734	341	PREDICTED: auxin-induced protein 5NG4-li	0.978	0.668	0.558	5e-73
296086520	350	unnamed protein product [Vitis vinifera]	0.978	0.651	0.558	7e-73
225424732	351	PREDICTED: auxin-induced protein 5NG4 [V	0.978	0.649	0.554	4e-70
147790133	336	hypothetical protein VITISV_015327 [Viti	0.978	0.678	0.554	7e-70
255581150	348	Auxin-induced protein 5NG4, putative [Ri	0.965	0.646	0.568	1e-66
356502006	349	PREDICTED: auxin-induced protein 5NG4-li	0.965	0.644	0.534	2e-60
147778659	335	hypothetical protein VITISV_034106 [Viti	0.965	0.671	0.519	6e-60

>gi|255581154|ref|XP_002531390.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528983|gb|EEF30974.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 137/231 (59%), Positives = 178/231 (77%), Gaps = 4/231 (1%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSN-LHNELR--SPQKNWI 57
           ME+LDLR++S  AKSIGTMV I G L  TLYKG  +  +SSS + LH E+   SP  NW 
Sbjct: 122 MERLDLRIKSGQAKSIGTMVLIIGGLVFTLYKGLPITGISSSGDELHKEMLFLSPS-NWA 180

Query: 58  IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR 117
           IGG  LAA S  L+L++++QT IIR+YP  L+     C FVTI S  V+L+AE++PN+WR
Sbjct: 181 IGGFFLAAHSIILALIFVIQTWIIRDYPSVLITNLFTCTFVTILSASVSLVAEKDPNAWR 240

Query: 118 LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTL 177
           +KPD +LI+IG +A FAV+LRS+ HTWACHKKGPVY SM+KP+G+V A+ MGV+ LGDTL
Sbjct: 241 IKPDIQLISIGFTAVFAVSLRSVVHTWACHKKGPVYTSMFKPIGMVIAVFMGVSFLGDTL 300

Query: 178 YLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           YLGSV+GA I+AFGFY+V+WG+++EE  ++DK+  S + SSPKAPLLQ KS
Sbjct: 301 YLGSVIGAVIIAFGFYAVMWGKTQEENTVEDKEDCSFEPSSPKAPLLQNKS 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086528|emb|CBI32117.3| unnamed protein product [Vitis vinifera]

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 135/229 (58%), Positives = 175/229 (76%), Gaps = 3/229 (1%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-LRSPQKNWIIG 59
           MEKLDL+  S  AK IGT+VSI GAL VT+YKGP +   SS+  + +E LRS   NW+IG
Sbjct: 88  MEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIG 147

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G +LA  +  ++L Y+VQTSIIR+YP ELM TFIC +FVT+QS++V+LIAER+P++WRLK
Sbjct: 148 GFLLAISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLK 207

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           PD ELIA+G SA   +A R  AH W  HKKGPV+V+M+KP+ IV A++MGVT LGD L+L
Sbjct: 208 PDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHL 267

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSV+GA I+AFGFY+V+WG+++EE  I+D     + SSS K PLLQ KS
Sbjct: 268 GSVIGAAIIAFGFYTVMWGKAKEE--IEDMTTSGIDSSSHKDPLLQNKS 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473431|ref|XP_002265468.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 135/229 (58%), Positives = 175/229 (76%), Gaps = 3/229 (1%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNE-LRSPQKNWIIG 59
           MEKLDL+  S  AK IGT+VSI GAL VT+YKGP +   SS+  + +E LRS   NW+IG
Sbjct: 119 MEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIG 178

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G +LA  +  ++L Y+VQTSIIR+YP ELM TFIC +FVT+QS++V+LIAER+P++WRLK
Sbjct: 179 GFLLAISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLK 238

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           PD ELIA+G SA   +A R  AH W  HKKGPV+V+M+KP+ IV A++MGVT LGD L+L
Sbjct: 239 PDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHL 298

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSV+GA I+AFGFY+V+WG+++EE  I+D     + SSS K PLLQ KS
Sbjct: 299 GSVIGAAIIAFGFYTVMWGKAKEE--IEDMTTSGIDSSSHKDPLLQNKS 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424734|ref|XP_002266639.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 128/229 (55%), Positives = 175/229 (76%), Gaps = 1/229 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMS-SSSNLHNELRSPQKNWIIG 59
           ME LDLRV+SS AKSIGT++SI GALT+T+Y+GP +   S +S+ L+  +  PQ NW+IG
Sbjct: 110 MENLDLRVRSSRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIG 169

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G++ A  +F L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+
Sbjct: 170 GILSAIAAFMLAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLR 229

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           PD ELIAI  SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYL
Sbjct: 230 PDIELIAIVYSAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYL 289

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSVVGA I+A GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 290 GSVVGAAIIAIGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086520|emb|CBI32109.3| unnamed protein product [Vitis vinifera]

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 128/229 (55%), Positives = 175/229 (76%), Gaps = 1/229 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMS-SSSNLHNELRSPQKNWIIG 59
           ME LDLRV+SS AKSIGT++SI GALT+T+Y+GP +   S +S+ L+  +  PQ NW+IG
Sbjct: 119 MENLDLRVRSSRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIG 178

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G++ A  +F L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+
Sbjct: 179 GILSAIAAFMLAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLR 238

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           PD ELIAI  SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYL
Sbjct: 239 PDIELIAIVYSAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYL 298

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSVVGA I+A GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 299 GSVVGAAIIAIGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424732|ref|XP_002266096.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086521|emb|CBI32110.3| unnamed protein product [Vitis vinifera]

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/229 (55%), Positives = 176/229 (76%), Gaps = 1/229 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSS-SNLHNELRSPQKNWIIG 59
           MEKLDL+V+SS AK +GT+VS+AGAL +T+YKGP +   S++ S L++ L  P+ NWIIG
Sbjct: 120 MEKLDLKVKSSRAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIG 179

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G + AA +F +++L + QTSIIR+YP EL+ T I  +F T+QS++V+LIAER+P++WRL+
Sbjct: 180 GFLTAAAAFMVAVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLR 239

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
            D ELIA+G S  F VALR   + W  H+KGPV+V+M+KP GIV A+IMGVT LGD L+L
Sbjct: 240 LDMELIAVGYSGIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHL 299

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSV+GA I+A GFY+V+WG+++EEKM +D     + +SS + PLLQ KS
Sbjct: 300 GSVIGAAIIALGFYTVVWGKAKEEKMAEDIAACGVNTSSHRVPLLQNKS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790133|emb|CAN67884.1| hypothetical protein VITISV_015327 [Vitis vinifera]

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 127/229 (55%), Positives = 176/229 (76%), Gaps = 1/229 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSS-SNLHNELRSPQKNWIIG 59
           MEKLDL+V+SS AK +GT+VS+AGAL +T+YKGP +   S++ S L++ L  P+ NWIIG
Sbjct: 105 MEKLDLKVKSSRAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIG 164

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G + AA +F +++L + QTSIIR+YP EL+ T I  +F T+QS++V+LIAER+P++WRL+
Sbjct: 165 GFLTAAAAFMVAVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLR 224

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
            D ELIA+G S  F VALR   + W  H+KGPV+V+M+KP GIV A+IMGVT LGD L+L
Sbjct: 225 LDMELIAVGYSGIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHL 284

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 228
           GSV+GA I+A GFY+V+WG+++EEKM +D     + +SS + PLLQ KS
Sbjct: 285 GSVIGAAIIALGFYTVVWGKAKEEKMAEDIAACGVNTSSHRVPLLQNKS 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581150|ref|XP_002531388.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528981|gb|EEF30972.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 129/227 (56%), Positives = 168/227 (74%), Gaps = 2/227 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSN-LHNELRSPQKNWIIG 59
           MEKLD + QS+ AKSIGT+VS+AGAL VTLYKG  + ++ S SN L+  L      W+ G
Sbjct: 119 MEKLDYKSQSTQAKSIGTIVSVAGALIVTLYKGQPITTLPSESNSLNQPLLLLSSTWVTG 178

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           G+   AG+  L+LLYIVQT I+++ P EL+ T I C FVT+ S++VAL+AE++ +SW LK
Sbjct: 179 GIFCTAGALCLALLYIVQTWILKDCPAELIITCIACFFVTVLSSIVALVAEKDISSWILK 238

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           PD ELIA  CSA FAV++RS+ H WAC KKGP+Y SM+KPLGI+ A  +G   LGDTLY 
Sbjct: 239 PDIELIATFCSAVFAVSIRSVVHAWACRKKGPLYASMFKPLGIIIATFLGFYFLGDTLYD 298

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSS-SPKAPLLQ 225
           GSV+G  I+A GFYSV+WG+++EEKM  D+   S +SS SPKAPLL+
Sbjct: 299 GSVIGGIIIALGFYSVLWGKAQEEKMGKDERNSSFESSASPKAPLLR 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502006|ref|XP_003519813.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/230 (53%), Positives = 165/230 (71%), Gaps = 5/230 (2%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNL----HNELRSPQKNW 56
           ME L+L+++SS AK IGT++SIAGAL +TLYKG  L   SS  NL         S Q +W
Sbjct: 121 MENLNLKLRSSHAKIIGTVISIAGALIITLYKGMPLTG-SSMRNLVLGGSEAYLSVQLDW 179

Query: 57  IIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSW 116
           IIGG +LA  S  LS+L+IVQT II++YPEEL+ T ICC  V I ST+VAL AE NP +W
Sbjct: 180 IIGGFLLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAW 239

Query: 117 RLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDT 176
            LK + ELIA+  SA F V++RS+ +TWA  KKGPVYV+M+ PLG+V AI MGV  LG++
Sbjct: 240 ILKSNKELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGES 299

Query: 177 LYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQT 226
           LYLGS++GA  +  GFY+V+W Q+++EK++++K+ +    +S  APLL T
Sbjct: 300 LYLGSMIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSAPLLST 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147778659|emb|CAN71719.1| hypothetical protein VITISV_034106 [Vitis vinifera]

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/227 (51%), Positives = 156/227 (68%), Gaps = 2/227 (0%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNEL-RSPQKNWIIG 59
           ME+LD R  SS+AKS+GT+VSIAGA  VT YKG  ++   S SN  ++L  S Q NW+ G
Sbjct: 99  MERLDWR-GSSMAKSMGTVVSIAGAFIVTFYKGSPILMTPSPSNFPDQLFLSQQSNWVFG 157

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           GL+LAA     S   I+Q SI+++YP EL+  F  C FV IQS   +LI ER P +W LK
Sbjct: 158 GLLLAADCVMSSAWLILQASILKKYPAELIINFYYCFFVAIQSAAASLIMERGPGAWSLK 217

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
           P T  IA+  S  F    +  A TW  H+KGPV+V+M+KP+GIV AI MGV  LGDT Y+
Sbjct: 218 PSTRFIAVMYSGVFGYVFQVGAITWCVHQKGPVFVAMFKPVGIVVAIAMGVIFLGDTFYM 277

Query: 180 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQT 226
           GS++GAT++  GFYSV+WG+++EEK+ +D  + SL+S+S KAPLLQ 
Sbjct: 278 GSLIGATVIVIGFYSVMWGKAKEEKIDEDIGVRSLESTSQKAPLLQN 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.858	0.540	0.461	1.7e-43
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.828	0.556	0.455	2.8e-43
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.849	0.539	0.430	1.9e-42
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.854	0.560	0.373	1.5e-35
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.854	0.563	0.359	8.3e-35
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.854	0.555	0.349	2.2e-34
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.854	0.552	0.364	2.8e-34
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.798	0.548	0.398	4.1e-33
TAIR|locus:2020688	375	UMAMIT36 "AT1G70260" [Arabidop	0.841	0.522	0.349	1.8e-30
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.858	0.583	0.325	3.4e-29

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 95/206 (46%), Positives = 134/206 (65%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGP------ALVSMSSSSNLHNELRSPQK 54
             ME++ LR  ++ AK IGT+VSI+GAL V LYKGP      +L   S + +L+  L S   
Sbjct:   134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDS 193

Query:    55 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPN 114
             +WIIGGL+LA     +S+ YI+QT ++  YPEE+   F+  +  T+ S  V L AE++ N
Sbjct:   194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLN 253

Query:   115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
             S+ LKP   L ++  S     +  S+ HTW  H KGPVY+S++KPL IV A+ MGV  LG
Sbjct:   254 SFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLG 313

Query:   175 DTLYLGSVVGATIVAFGFYSVIWGQS 200
             D LYLGSV+G+ I++ GFY+VIWG++
Sbjct:   314 DALYLGSVIGSLILSLGFYTVIWGKA 339

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 91/200 (45%), Positives = 132/200 (66%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGG 60
             ME++ LR  ++ AK IGT+VSI+GAL + LYKGP L+  +S ++        + +WIIGG
Sbjct:   130 MEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF-------ESSWIIGG 182

Query:    61 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 120
             L+L      LS+ +I+QT I+  YPEE+   F   +  T+ S  V L+ E++ NSW+LKP
Sbjct:   183 LLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKP 242

Query:   121 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 180
                L ++  S  F  +L S+ HTW  H KGPVY+S++KPL I  A+ M    LGDTL+LG
Sbjct:   243 GFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLG 302

Query:   181 SVVGATIVAFGFYSVIWGQS 200
             SV+G+ I++FGFY+VIWG++
Sbjct:   303 SVIGSVILSFGFYTVIWGKA 322

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 87/202 (43%), Positives = 129/202 (63%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-NLHNELRSPQKNWIIG 59
             ME +  +  SS+AK +GT+VSI GA  VTLY GP +++ S  S +L ++  +P  NWI+G
Sbjct:   125 MESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNP--NWILG 182

Query:    60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRL 118
                LA   F + L YIVQT I+REYP E        + V+  + +V L  E N   +W++
Sbjct:   183 AGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKI 242

Query:   119 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLY 178
             KP+  L++I CS  F   + +  HTWA   KGP++V+M+KPL I  A+ MGV  L D+LY
Sbjct:   243 KPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLY 302

Query:   179 LGSVVGATIVAFGFYSVIWGQS 200
             +GS++GAT++  GFY+V+WG++
Sbjct:   303 IGSLIGATVITIGFYTVMWGKA 324

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 77/206 (37%), Positives = 124/206 (60%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-----NLHNELRSPQKN 55
             MEK   + +SS+AK +GT+VS+ GAL V LY GP + + SS        L   L S   +
Sbjct:   126 MEKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSD 185

Query:    56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
             WIIGG +LA     + + +I+Q  I++ YP     +F   +  +I ++++ ++AE+N P+
Sbjct:   186 WIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPS 245

Query:   115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
              W +  D  L+ I     F     ++ H WA   KGPVY+++++PL I+ A+IMG   LG
Sbjct:   246 IWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLG 304

Query:   175 DTLYLGSVVGATIVAFGFYSVIWGQS 200
             D+ YLGS+VG  +++ GFY+V+WG++
Sbjct:   305 DSFYLGSLVGGILISLGFYTVMWGKA 330

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 74/206 (35%), Positives = 124/206 (60%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS-----NLHNELRSPQKN 55
             MEK+  + +SS+AK +GT++S+ GAL V LY GP +   SS        L   L S   +
Sbjct:   127 MEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSD 186

Query:    56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
             W+IGG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++++ L+ E+N P+
Sbjct:   187 WLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPS 246

Query:   115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
              W ++ D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++M    L 
Sbjct:   247 VWIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLN 305

Query:   175 DTLYLGSVVGATIVAFGFYSVIWGQS 200
             D+LYLG ++G  ++  GFY+V+WG++
Sbjct:   306 DSLYLGCLIGGLLITLGFYAVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 72/206 (34%), Positives = 125/206 (60%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKN 55
             MEK+  + +SS+AK +GT++S+ GA  V  Y GP +   SS   L+    SP     + +
Sbjct:   127 MEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSD 186

Query:    56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
             W+IGG +L     F+S+ +I+QT I+REYPE    + +  + ++I ++++ L+ E+N P+
Sbjct:   187 WLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPS 246

Query:   115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
              W +  D  L  I  +     ++  + H+WA   K P+Y++++KPL I+ A++MG   L 
Sbjct:   247 IWIIHFDITLFTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLN 305

Query:   175 DTLYLGSVVGATIVAFGFYSVIWGQS 200
             D+LYLG ++G  ++  GFY V+WG++
Sbjct:   306 DSLYLGCLIGGILITLGFYVVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 75/206 (36%), Positives = 122/206 (59%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSS--NLHN---ELRSPQKN 55
             MEK+  + +SSLAK +GT++S+ GAL V  Y GP +   SS    N       L S   +
Sbjct:   130 MEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSD 189

Query:    56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
             W+IGG +L     F+S+ +I+Q  I+  YP     +F+  V V+I ++ + L+ E+N P+
Sbjct:   190 WLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPS 249

Query:   115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
              W +  D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L 
Sbjct:   250 VWIIHFDITLITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 308

Query:   175 DTLYLGSVVGATIVAFGFYSVIWGQS 200
             D+LYLG ++G  ++  GFY+V+WG++
Sbjct:   309 DSLYLGCLIGGILITLGFYAVMWGKA 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 80/201 (39%), Positives = 119/201 (59%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGG 60
             ME + L  +SS+AK +GT++SI GAL VTLY GP L  MSS S+           WIIGG
Sbjct:   126 MENISLGKKSSVAKVLGTILSIIGALVVTLYHGPML--MSSHSD-----------WIIGG 172

Query:    61 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLK 119
              +LA     +S+ Y+V    +  YP  ++ T +  V + +    V+L+AE+ NP +W ++
Sbjct:   173 GLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIR 232

Query:   120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
              D  LI +  +         + HTWA   KGPVY+SM+KPL I+ A +     LG++LYL
Sbjct:   233 FDITLITVVATGILNSGYYVI-HTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYL 291

Query:   180 GSVVGATIVAFGFYSVIWGQS 200
             GSV+G  +++ GFY V+WG++
Sbjct:   292 GSVMGGILISIGFYMVLWGKA 312

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2020688 UMAMIT36 "AT1G70260" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 72/206 (34%), Positives = 117/206 (56%)

Query:     3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQK-------- 54
             KLD R  S+ AK +GT+VS++GA    LYKGP  +  +SS++ +  L+S  K        
Sbjct:   130 KLDWRNTSTRAKLMGTIVSLSGAFVEELYKGP-FIRPASSASPNRFLKSVPKLLVYYNLP 188

Query:    55 -NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP 113
              NW +G + LA   F +SL  +VQT  +++YP  +       +  TIQ  + +L  ER+ 
Sbjct:   189 DNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDL 248

Query:   114 NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLL 173
             ++W+++P+ +L  I  +  F   +R+  H      KGP YV ++KP GI +A + G +  
Sbjct:   249 SAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFF 308

Query:   174 GDTLYLGSVVGATIVAFGFYSVIWGQ 199
              ++L+ GSV+GA I   G+++V WGQ
Sbjct:   309 VNSLHYGSVLGAAIAGVGYFTVSWGQ 334

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 65/200 (32%), Positives = 108/200 (54%)

Query:     1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGG 60
             +E + L+    +AK  G+MV + GAL     KGP+L++  +SS + N      KN + G 
Sbjct:   120 LETVTLKKSHGVAKVTGSMVGMLGALVFAFVKGPSLINHYNSSTIPNGTVPSTKNSVKGS 179

Query:    61 LVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 120
             + + A +    L  I+Q+ +++EYP +L    + C+F  IQS V A+   RNP+ W+++ 
Sbjct:   180 ITMLAANTCWCLWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKIEF 239

Query:   121 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 180
                L+++         L      WA  KKGPV+ ++Y PL ++   I+   L  +T YLG
Sbjct:   240 GLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKETFYLG 299

Query:   181 SVVGATIVAFGFYSVIWGQS 200
             SV GA ++  G Y  +WG++
Sbjct:   300 SVGGAVLLVCGLYLGLWGKT 319

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028865001 SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (300 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	233
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	9e-45
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.004

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  152 bits (386), Expect = 9e-45
 Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 12/230 (5%)

Query: 1   MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSP-----QKN 55
           MEK+  + +SS+AK +GT++S+ GAL V  Y GP +   SS   L+    SP       +
Sbjct: 127 MEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSD 186

Query: 56  WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN 114
           W+IGG +L     F+S+ +I+Q  I+ EYP     +F+  V V+I ++++ L+ E+N P+
Sbjct: 187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246

Query: 115 SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLG 174
            W +  D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L 
Sbjct: 247 VWIIHFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLN 305

Query: 175 DTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 224
           D+LYLG ++G  ++  GFY+V+WG++ EE     KD     S   K PLL
Sbjct: 306 DSLYLGCLIGGILITLGFYAVMWGKANEE-----KDQLLSFSGKEKTPLL 350

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 5/140 (3%)

Query: 60  GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 119
           GL+LA  +  L  LY      +       +A  +  +   +   +  L     P   R  
Sbjct: 155 GLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSR-- 212

Query: 120 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 179
                + +     F+  L  L   +A    G   V++   L  VFA ++GV LLG+ L  
Sbjct: 213 ---AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP 269

Query: 180 GSVVGATIVAFGFYSVIWGQ 199
             ++GA +V  G        
Sbjct: 270 AQLLGAALVVLGVLLASLRA 289

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	233
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.93
PRK11689	295	aromatic amino acid exporter; Provisional	99.9
PRK11272	292	putative DMT superfamily transporter inner membran	99.89
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.89
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.87
PRK15430	296	putative chloramphenical resistance permease RarD;	99.85
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.84
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.82
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.77
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.74
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.62
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.58
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.55
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.54
COG2510	140	Predicted membrane protein [Function unknown]	99.49
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.44
KOG2765	416	consensus Predicted membrane protein [Function unk	99.42
COG2962	293	RarD Predicted permeases [General function predict	99.39
KOG2766	336	consensus Predicted membrane protein [Function unk	99.34
PRK15430	296	putative chloramphenical resistance permease RarD;	99.25
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.18
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.17
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.12
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.1
KOG1580	337	consensus UDP-galactose transporter related protei	99.01
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.99
PLN00411	358	nodulin MtN21 family protein; Provisional	98.92
PRK11272	292	putative DMT superfamily transporter inner membran	98.87
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.86
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.81
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.78
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.77
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.76
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.75
PRK11689	295	aromatic amino acid exporter; Provisional	98.74
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.69
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.6
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.56
KOG1581	327	consensus UDP-galactose transporter related protei	98.56
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.54
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.51
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.49
COG2962	293	RarD Predicted permeases [General function predict	98.37
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.31
KOG1582	367	consensus UDP-galactose transporter related protei	98.3
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.3
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.19
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.16
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.15
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.07
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.97
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.93
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.83
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.65
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.64
COG2076	106	EmrE Membrane transporters of cations and cationic	97.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.6
PRK11431	105	multidrug efflux system protein; Provisional	97.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	97.6
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.56
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.44
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.29
PRK13499	345	rhamnose-proton symporter; Provisional	97.21
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.19
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.16
PRK13499	345	rhamnose-proton symporter; Provisional	97.01
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.01
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	96.54
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.74
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.41
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.39
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.08
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	94.18
KOG2765	416	consensus Predicted membrane protein [Function unk	94.12
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.4
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	92.02
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	91.66
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	90.79
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	90.48
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	88.92
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	88.62
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	88.25
PRK02237	109	hypothetical protein; Provisional	86.5
KOG1580	337	consensus UDP-galactose transporter related protei	85.15
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	84.98
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	81.73
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	81.04
KOG3912	372	consensus Predicted integral membrane protein [Gen	80.34

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=1e-29  Score=229.73  Aligned_cols=200  Identities=38%  Similarity=0.813  Sum_probs=156.0

Q ss_pred             CcceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCc-----cCC-CCCCCCCchhhHHHHHHHHHHHHHHHH
Q 026788            1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSN-----LHN-ELRSPQKNWIIGGLVLAAGSFFLSLLY   74 (233)
Q Consensus         1 ~e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~-----~~~-~~~~~~~~~~~G~ll~l~aa~~~a~y~   74 (233)
                      +|++.+|||+++++++|++++++|++++...+++... .+++++     .+. +......+...|++++++|+++||+|+
T Consensus       127 ~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~  205 (358)
T PLN00411        127 MEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVF-VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSF  205 (358)
T ss_pred             hchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccc-cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            4788899999999999999999999988754443210 000000     000 011122345679999999999999999


Q ss_pred             HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCC-CCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcce
Q 026788           75 IVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVY  153 (233)
Q Consensus        75 v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~  153 (233)
                      +++|+..+++++....++|++.++++.+.+.+...++. ...|...++.....++|.+++ +.++|.+|+|++++.||++
T Consensus       206 il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~  284 (358)
T PLN00411        206 ILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLY  284 (358)
T ss_pred             HHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchH
Confidence            99999988887666788899999998888877776542 223322223345568898876 6789999999999999999


Q ss_pred             eeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhh
Q 026788          154 VSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       154 ~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      ++++.+++|++++++|+++|||++++.+++|+++|+.|++++.+++++|
T Consensus       285 as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        285 LAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            9999999999999999999999999999999999999999998765544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.93  E-value=7.1e-25  Score=193.44  Aligned_cols=182  Identities=16%  Similarity=0.135  Sum_probs=145.3

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|||+++++++|++++++|+.++.. ++.                ........|+++.++++++|++|++++|+..
T Consensus       104 ~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~-~~~----------------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~  166 (299)
T PRK11453        104 GAFTFGERLQGKQLAGIALAIFGVLVLIE-DSL----------------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIM  166 (299)
T ss_pred             HHHHhcCcCcHHHHHHHHHHHHhHHHhcc-ccC----------------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            46789999999999999999999988752 110                0111234799999999999999999999987


Q ss_pred             hhcCh--hhHHHHHHHHHHHHHHHHHHHHhcCCC---CccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeee
Q 026788           82 REYPE--ELMATFICCVFVTIQSTVVALIAERNP---NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSM  156 (233)
Q Consensus        82 ~~~~~--~l~~t~~~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~  156 (233)
                      ++.++  ......++++.+.+.+...+...+.+.   ..+...+...|..++|+|+++|+++|.+|++++++.++++++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~  246 (299)
T PRK11453        167 SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAP  246 (299)
T ss_pred             cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            65432  234556777777766665554444321   0111112346889999999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          157 YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       157 ~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      +.+++|+++.++|++++||++++.+++|+++|+.|+++..++++
T Consensus       247 ~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        247 LSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999999999887765

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.90  E-value=1.7e-23  Score=184.43  Aligned_cols=182  Identities=12%  Similarity=0.048  Sum_probs=134.1

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ..+++|||+++.+++|++++++|++++... +......+        ..+...+...|+++.++|+++||+|+++.|+..
T Consensus       109 ~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~-~~~~~~~~--------~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~  179 (295)
T PRK11689        109 AVLFNGQKANWLLIPGLLLALAGVAWVLGG-DNGLSLAE--------LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYA  179 (295)
T ss_pred             HHHHhcCCccHHHHHHHHHHHHhHhheecC-Cccchhhh--------hhhccccChHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            356789999999999999999999887532 11100000        000001234699999999999999999999987


Q ss_pred             hhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchH
Q 026788           82 REYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLG  161 (233)
Q Consensus        82 ~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~  161 (233)
                      +++ ++....   ...+++.+.+.....+.+...+   +...|..++|.++ +++++|.+|++++|+.++++++.+.+++
T Consensus       180 ~~~-~~~~~~---~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~  251 (295)
T PRK11689        180 RGK-NGITLF---FILTALALWIKYFLSPQPAMVF---SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFT  251 (295)
T ss_pred             CCC-CchhHH---HHHHHHHHHHHHHHhcCccccC---CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhH
Confidence            665 354432   2233444444333332211111   2245777888884 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          162 IVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       162 Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      |+++++++++++||++++.+++|+++|+.|+++..+.++
T Consensus       252 Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        252 PVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            999999999999999999999999999999988766543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.89  E-value=1.6e-22  Score=177.94  Aligned_cols=173  Identities=16%  Similarity=0.196  Sum_probs=142.9

Q ss_pred             ecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026788            5 DLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREY   84 (233)
Q Consensus         5 ~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~   84 (233)
                      ++|||+++++++|++++++|+.++... +.                 . .....|+++.++++++||.|.+..|+..++ 
T Consensus       116 ~~~e~~~~~~~~~~~la~~Gv~ll~~~-~~-----------------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-  175 (292)
T PRK11272        116 LFGIRTRKLEWLGIAIGLAGIVLLNSG-GN-----------------L-SGNPWGAILILIASASWAFGSVWSSRLPLP-  175 (292)
T ss_pred             HhcccCchhHHHHHHHHHHhHHHHhcC-cc-----------------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence            369999999999999999999876421 10                 1 123579999999999999999999987543 


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHHHH
Q 026788           85 PEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVF  164 (233)
Q Consensus        85 ~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~  164 (233)
                       ++...+++++.++++.+.+.....+.+...  ......|..++|+++++|+++|.+|++++++.++++++.+.+++|++
T Consensus       176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~  252 (292)
T PRK11272        176 -VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVV  252 (292)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence             245667899999998888876654432211  11224688999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          165 AIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       165 a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      +++++++++||++++.+++|+++|+.|+++..+.++
T Consensus       253 a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        253 AVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999988766544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.89  E-value=2.7e-22  Score=176.55  Aligned_cols=176  Identities=11%  Similarity=0.054  Sum_probs=136.8

Q ss_pred             ccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCh
Q 026788            7 RVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPE   86 (233)
Q Consensus         7 ke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~   86 (233)
                      +|+++  +..++.++++|+.++.. .+.+                .+.....|+++.++++++|++|++..|+..++++ 
T Consensus       116 ~~~~~--~~~~~~i~~~Gv~li~~-~~~~----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-  175 (293)
T PRK10532        116 SRRPV--DFVWVVLAVLGLWFLLP-LGQD----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-  175 (293)
T ss_pred             cCChH--HHHHHHHHHHHHheeee-cCCC----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence            35554  45667889999987652 1110                1112357999999999999999999999877764 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHH
Q 026788           87 ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAI  166 (233)
Q Consensus        87 ~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~  166 (233)
                      +... .++++++++++.++....+. ...+   ....|..++|+|+++|+++|.+|+++++|.++++++++.++||+++.
T Consensus       176 ~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~---~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~  250 (293)
T PRK10532        176 PATV-AIGSLIAALIFVPIGALQAG-EALW---HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAA  250 (293)
T ss_pred             chHH-HHHHHHHHHHHHHHHHHccC-cccC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHH
Confidence            5555 57778888787776654332 1111   12345567899999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhhhc
Q 026788          167 IMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMID  207 (233)
Q Consensus       167 i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~~~  207 (233)
                      ++|++++||++++.|++|+++|+.|++...+..++|.|.||
T Consensus       251 l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~~  291 (293)
T PRK10532        251 VSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIKE  291 (293)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999888777665555553

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.87  E-value=1.6e-21  Score=167.50  Aligned_cols=168  Identities=16%  Similarity=0.146  Sum_probs=140.5

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ..+++|||+++++++|++++++|++++.. ++                  .......|+++.++++++|+.|.++.|+..
T Consensus        91 ~~l~~~e~~~~~~~~gi~i~~~Gv~li~~-~~------------------~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        91 SDLMGKERPRKLVLLAAVLGLAGAVLLLS-DG------------------NLSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             HHHHccCCCcHHHHHHHHHHHHhHHhhcc-CC------------------cccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            35689999999999999999999988752 11                  112346899999999999999999999988


Q ss_pred             hhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccch
Q 026788           82 REYP-EELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL  160 (233)
Q Consensus        82 ~~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l  160 (233)
                      ++.+ .+...+.+++.++++.+.+.....+++. .+   ....|..+++.+++++.++|.+|++++++.++++++.+.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            7654 2345566788899888888766544322 11   23457788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCccchhhhhhHHHHHHHH
Q 026788          161 GIVFAIIMGVTLLGDTLYLGSVVGATIVAFGF  192 (233)
Q Consensus       161 ~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv  192 (233)
                      +|+++++++++++||+++..+++|+++++.|+
T Consensus       228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.87  E-value=7.9e-22  Score=174.00  Aligned_cols=178  Identities=11%  Similarity=0.035  Sum_probs=134.9

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|||+++++++|++++++|+++..  .+                  ..+....|+++.++|+++|++|.++.|+..
T Consensus       109 ~~~~~~e~~~~~~~~~l~l~~~Gv~l~~--~~------------------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~  168 (302)
T TIGR00817       109 SAFFLGQEFPSTLWLSLLPIVGGVALAS--DT------------------ELSFNWAGFLSAMISNITFVSRNIFSKKAM  168 (302)
T ss_pred             HHHHhCCCCcHHHHHHHHHHHHHHhhhc--CC------------------cccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5678999999999999999999997642  11                  011235699999999999999999999987


Q ss_pred             h--hcChhhHHHHHHHHHHHHHHHHHHHHhcCCCC---cccc----CC-chhHHHHHHHHHHHHHHHHHHHHHhhhccCc
Q 026788           82 R--EYPEELMATFICCVFVTIQSTVVALIAERNPN---SWRL----KP-DTELIAIGCSAFFAVALRSLAHTWACHKKGP  151 (233)
Q Consensus        82 ~--~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~---~~~~----~~-~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~  151 (233)
                      +  ++ ++...+.|++.++++.+.++....+....   .+..    .. ...+...++.+..+....+.++++++++.+|
T Consensus       169 ~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa  247 (302)
T TIGR00817       169 TIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSP  247 (302)
T ss_pred             ccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            7  55 47899999999999999998876653211   0100    00 0011112222222222222455689999999


Q ss_pred             ceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          152 VYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       152 ~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      ++++++.+++|++++++|++++||++++.+++|+++++.|+++..+.|+
T Consensus       248 ~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       248 LTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             hHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999998776543

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.85  E-value=2.5e-20  Score=164.34  Aligned_cols=173  Identities=13%  Similarity=0.112  Sum_probs=124.2

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|||+++++++|++++++|++++....+                    +.    ..+.++++++|++|++++|+..
T Consensus       117 ~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~--------------------~~----~~~~l~aa~~~a~~~i~~r~~~  172 (296)
T PRK15430        117 GMIFLGERFRRMQWLAVILAICGVLVQLWTFG--------------------SL----PIIALGLAFSFAFYGLVRKKIA  172 (296)
T ss_pred             HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC--------------------Cc----cHHHHHHHHHHHHHHHHHHhcC
Confidence            45789999999999999999999988753211                    11    1468889999999999988864


Q ss_pred             hhc-ChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccch
Q 026788           82 REY-PEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL  160 (233)
Q Consensus        82 ~~~-~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l  160 (233)
                      ++. .+....+.|++.++.....+.   ...+...+.. .+..+..+++.+.+.+.++|.+|++++++.|++++|++.++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l  248 (296)
T PRK15430        173 VEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQ-NPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYI  248 (296)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            321 123444556666665443222   1111111111 11222334443334688999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhh
Q 026788          161 GIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       161 ~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      +|++++++|++++||++++.+++|+++|+.|+.+........
T Consensus       249 ~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~  290 (296)
T PRK15430        249 GPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT  290 (296)
T ss_pred             HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998877765544333

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.84  E-value=2.8e-20  Score=162.69  Aligned_cols=171  Identities=16%  Similarity=0.142  Sum_probs=128.3

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|||+++++++|+.+++.|++++.. ++.                 .. ....|+.+.++++++|++|+++.|+..
T Consensus       107 ~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~-~~~-----------------~~-~~~~g~~~~l~aal~~a~~~i~~k~~~  167 (281)
T TIGR03340       107 ATLTLGETLSPLAWLGILIITLGLLVLGL-SRF-----------------AQ-HRRKAYAWALAAALGTAIYSLSDKAAA  167 (281)
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHhc-ccc-----------------cc-cchhHHHHHHHHHHHHHHhhhhccccc
Confidence            45789999999999999999999988753 111                 11 124688899999999999999988764


Q ss_pred             hhcCh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           82 REYPE---ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        82 ~~~~~---~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      ++.++   ....+.+++..+++.+.+.....+...  +. ..+..+..+++.+.+++.++|.+|++++++.|+++++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~  244 (281)
T TIGR03340       168 LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALR  244 (281)
T ss_pred             cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeec
Confidence            43321   112333444444333333222222211  11 1123466778999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHH
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  194 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~l  194 (233)
                      +++|+++.++|++++||+++..+++|+++|+.|+++
T Consensus       245 ~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       245 NTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             ccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.82  E-value=2.3e-19  Score=160.25  Aligned_cols=186  Identities=15%  Similarity=0.180  Sum_probs=147.5

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      .+++|+|+++.+++|+++|++|+++++..+..  +         .+....+.+...||++++.+++.||+|++++++..+
T Consensus       124 ~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~--~---------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~  192 (334)
T PF06027_consen  124 FIFLKRRYSWFHILGVLICIAGVVLVVVSDVL--S---------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK  192 (334)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhhhheeeeccc--c---------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            57899999999999999999999988654211  0         011124556799999999999999999999999998


Q ss_pred             hcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHH
Q 026788           83 EYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGI  162 (233)
Q Consensus        83 ~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~P  162 (233)
                      +.+ ...+.++-.++|.++..+...+.|.+.. -...++...........++..+-|.+....+++.+|+...+-.....
T Consensus       193 ~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd  270 (334)
T PF06027_consen  193 KAP-RVEFLGMLGLFGFIISGIQLAILERSGI-ESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSD  270 (334)
T ss_pred             cCC-HHHHHHHHHHHHHHHHHHHHHheehhhh-hccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhh
Confidence            875 6788888889999998888877775421 01112223333333344466777889999999999999999999999


Q ss_pred             HHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          163 VFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       163 v~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      +++++++++++|+++++..++|.++|+.|+.+....+++
T Consensus       271 ~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  271 FYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            999999999999999999999999999999887665443

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.77  E-value=4.1e-18  Score=153.86  Aligned_cols=176  Identities=12%  Similarity=0.045  Sum_probs=138.6

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +++++|||+++++++++++.++|+++.+.  +.                 .+ ....|+++.++|+++|+.|+++.|+..
T Consensus       158 s~~~l~ek~s~~~~l~l~l~v~Gv~l~~~--~~-----------------~~-~~~~G~~~~l~s~~~~a~~~i~~k~~~  217 (350)
T PTZ00343        158 SILFLKQFLNLYAYLSLIPIVGGVALASV--KE-----------------LH-FTWLAFWCAMLSNLGSSLRSIFAKKTM  217 (350)
T ss_pred             HHHHhCCCccHHHHHHHHHHHHHHHheec--cc-----------------ch-hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            46789999999999999999999988642  11                 11 135799999999999999999999987


Q ss_pred             hhcC------hhhHHHHHHHHHHHHHHHHHHHHhcCCC--Cccc----cCCchhHHHHHHHHHHHHHHHHHHHHH----h
Q 026788           82 REYP------EELMATFICCVFVTIQSTVVALIAERNP--NSWR----LKPDTELIAIGCSAFFAVALRSLAHTW----A  145 (233)
Q Consensus        82 ~~~~------~~l~~t~~~~~~g~l~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~gv~~s~ia~~l~~~----~  145 (233)
                      ++.+      ++.....+++.+|+++++|+....|...  ..+.    ......+..+++ .++.++++|++|+.    +
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~  296 (350)
T PTZ00343        218 KNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYC  296 (350)
T ss_pred             cccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            6532      2445566678899999999887665421  0110    000112334555 46678999999995    9


Q ss_pred             hhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          146 CHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       146 l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      +++.+|...++..++.|++++++|++++||++++.+++|+++++.|+++..+.
T Consensus       297 l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        297 LGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999886543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.74  E-value=7.8e-17  Score=138.98  Aligned_cols=170  Identities=20%  Similarity=0.259  Sum_probs=131.7

Q ss_pred             eecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            4 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKN-WIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         4 ~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      +++|||+++.+++|+.+++.|++++....+                  .+.+ ...|+++.+.++++|++|.+..|+.. 
T Consensus       117 ~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~------------------~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-  177 (292)
T COG0697         117 LLLGERLSLLQILGILLALAGVLLILLGGG------------------GGGILSLLGLLLALAAALLWALYTALVKRLS-  177 (292)
T ss_pred             HHccCCCcHHHHHHHHHHHHhHHheecCCC------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            456999999999999999999988753211                  1111 46899999999999999999999887 


Q ss_pred             hcChhhHHHH-HHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchH
Q 026788           83 EYPEELMATF-ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLG  161 (233)
Q Consensus        83 ~~~~~l~~t~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~  161 (233)
                      +. ++..... +++. +. .+...........  .+ .....+..+.+.|+++++++|.+|++++++.+++.++++.+++
T Consensus       178 ~~-~~~~~~~~~~~~-~~-~~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  251 (292)
T COG0697         178 RL-GPVTLALLLQLL-LA-LLLLLLFFLSGFG--AP-ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLE  251 (292)
T ss_pred             CC-ChHHHHHHHHHH-HH-HHHHHHHHhcccc--cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence            44 3445444 4444 22 2222222222111  11 1224578889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          162 IVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       162 Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      |+++.+++++++||+++..+++|+++++.|+.+...+
T Consensus       252 ~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         252 PVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999887766

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.62  E-value=2.3e-15  Score=114.37  Aligned_cols=125  Identities=20%  Similarity=0.308  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 026788           68 FFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  147 (233)
Q Consensus        68 ~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~  147 (233)
                      ++|+.+.++.|+..++.+ +...+++.+..+++ +.+.....+...  ........+...++.+++++.+++.+|+++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            478999999999998874 88999999999997 666665555432  11112345777888999989999999999999


Q ss_pred             ccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          148 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       148 ~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      +.+++.++++.+++|+++.+++++++||++++.+++|+++++.|++++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.58  E-value=2.9e-14  Score=121.01  Aligned_cols=161  Identities=13%  Similarity=0.046  Sum_probs=127.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHH
Q 026788           16 IGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICC   95 (233)
Q Consensus        16 ~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~   95 (233)
                      +-+.+++.|+.++.-. +.                +.+.-...|..+.+.++.||+.|++..+|..+..+ ...-++..+
T Consensus       123 vwvaLAvlGi~lL~p~-~~----------------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm  184 (292)
T COG5006         123 VWVALAVLGIWLLLPL-GQ----------------SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGM  184 (292)
T ss_pred             HHHHHHHHHHHhheec-cC----------------CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHH
Confidence            3455788899877532 21                12233478999999999999999999999876443 456678999


Q ss_pred             HHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCC
Q 026788           96 VFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGD  175 (233)
Q Consensus        96 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE  175 (233)
                      ..++++.+|++..... +.-+.   +.-...-+-.++++|++-|.+-.-+++|++....+..+.+||.++++.|+++|||
T Consensus       185 ~vAaviv~Pig~~~ag-~~l~~---p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e  260 (292)
T COG5006         185 LVAALIVLPIGAAQAG-PALFS---PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGE  260 (292)
T ss_pred             HHHHHHHhhhhhhhcc-hhhcC---hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcC
Confidence            9999999999874433 21111   1234455678999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhHHHHHHHHHHHhhc
Q 026788          176 TLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       176 ~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .+++.|++|+++|+.+..=..+.
T Consensus       261 ~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         261 TLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             CCCHHHHHHHHHHHHHHhccccc
Confidence            99999999999999876544443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.55  E-value=3.5e-14  Score=125.12  Aligned_cols=172  Identities=14%  Similarity=0.127  Sum_probs=127.2

Q ss_pred             ceecccccCchh----hhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 026788            3 KLDLRVQSSLAK----SIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQT   78 (233)
Q Consensus         3 ~~~lke~~s~~~----~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~   78 (233)
                      .+++|||.++++    ++|++++++|++++...++...            ......+...|.++.++|+++|+.|.+..|
T Consensus       105 ~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~------------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~  172 (290)
T TIGR00776       105 VIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA------------GIKSEFNFKKGILLLLMSTIGYLVYVVVAK  172 (290)
T ss_pred             HHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc------------ccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999    9999999999887643211100            000002346799999999999999999988


Q ss_pred             HHHhhcChhhHHH---HHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh-ccCccee
Q 026788           79 SIIREYPEELMAT---FICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH-KKGPVYV  154 (233)
Q Consensus        79 ~~~~~~~~~l~~t---~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~-~~~~~~~  154 (233)
                      +.  ++ +|.+.+   ++.++++++.+.+..  ....  .+.  ....+..++ .|++ +.++|.+|..+.+ +.+++.+
T Consensus       173 ~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~--~~~~--~~~--~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~  241 (290)
T TIGR00776       173 AF--GV-DGLSVLLPQAIGMVIGGIIFNLGH--ILAK--PLK--KYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATS  241 (290)
T ss_pred             Hc--CC-CcceehhHHHHHHHHHHHHHHHHH--hccc--chH--HHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhH
Confidence            75  35 467774   444445555444332  1111  111  112244444 8887 7999999999999 9999999


Q ss_pred             eeccchHHHHHHHHHHHHhCCccchhhh----hhHHHHHHHHHHHhh
Q 026788          155 SMYKPLGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFYSVIW  197 (233)
Q Consensus       155 s~~~~l~Pv~a~i~~~l~lgE~l~~~~i----iG~~LIl~Gv~lv~~  197 (233)
                      +++..++|+++.+++++++||+.+..|+    +|+++|+.|+.+...
T Consensus       242 ~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       242 FSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999    999999999887644

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00688 rarD rarD protein

Probab=99.54  E-value=7.1e-14  Score=120.45  Aligned_cols=139  Identities=12%  Similarity=0.104  Sum_probs=97.0

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|||+++++++|++++++|++++...++                   +  .   ..+.++++++|++|.+..|+..
T Consensus       114 a~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------------------~--~---~~~~l~aa~~~a~~~i~~~~~~  169 (256)
T TIGR00688       114 GRVFLKERISRFQFIAVIIATLGVISNIVLKG-------------------S--L---PWEALVLAFSFTAYGLIRKALK  169 (256)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------------------C--c---hHHHHHHHHHHHHHHHHHhhcC
Confidence            46789999999999999999999988753211                   0  1   1457889999999999988875


Q ss_pred             hhcChhhHHHHHHHHHHHHHHHHHHH---HhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           82 REYPEELMATFICCVFVTIQSTVVAL---IAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        82 ~~~~~~l~~t~~~~~~g~l~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      ++ + .....     .+.+.+.+...   ....++......+...|..+++.|++ +.++|.+|++++|+.++++++++.
T Consensus       170 ~~-~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~  241 (256)
T TIGR00688       170 NT-D-LAGFC-----LETLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQ  241 (256)
T ss_pred             CC-C-cchHH-----HHHHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHH
Confidence            42 2 22221     11122222221   11111110111112357778888876 899999999999999999999999


Q ss_pred             chHHHHHHHHHHHH
Q 026788          159 PLGIVFAIIMGVTL  172 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~  172 (233)
                      |++|+++++++++.
T Consensus       242 yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       242 YIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.49  E-value=8.2e-13  Score=101.42  Aligned_cols=135  Identities=19%  Similarity=0.153  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHH
Q 026788           60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  139 (233)
Q Consensus        60 ~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~  139 (233)
                      .++.+++|+.|++-.++.|--.++. +|...|+.......+++..+.+..+.... .....+..|.-++..|+ .++.++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~~~-~~~~~~k~~lflilSGl-a~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNWQA-GGEIGPKSWLFLILSGL-AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCceec-ccccCcceehhhhHHHH-HHHHHH
Confidence            4789999999999999988777766 47777888888888888887776664322 11113456777777884 789999


Q ss_pred             HHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          140 LAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       140 ~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      .+|++++++-.++++.++.-..|++++++|+++|||+++..+++|+.||.+|..++.+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999999999999999877543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.44  E-value=2.1e-12  Score=114.25  Aligned_cols=189  Identities=15%  Similarity=0.165  Sum_probs=141.0

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      +.+++|+|+++.+++++++-.+|+++....+....    ++      ..........|+++++++.++-+.+.+++++..
T Consensus       108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~----~~------~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~  177 (303)
T PF08449_consen  108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS----SS------SNSSSFSSALGIILLLLSLLLDAFTGVYQEKLF  177 (303)
T ss_pred             HHHhcCccccHHHHHHHHHHHhhHheeeecccccc----cc------cccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999999999988754322110    00      011112223499999999999999999999998


Q ss_pred             hhcC-hhhHHHHHHHHHHHHHHHHHHHH--hcCCCCccc--cCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeee
Q 026788           82 REYP-EELMATFICCVFVTIQSTVVALI--AERNPNSWR--LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSM  156 (233)
Q Consensus        82 ~~~~-~~l~~t~~~~~~g~l~~~~~~~~--~~~~~~~~~--~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~  156 (233)
                      ++++ ++.+...+..+++.+...+....  .++....+.  ...+..+..++...+ +..++....++.+++.|+...++
T Consensus       178 ~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~  256 (303)
T PF08449_consen  178 KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTI  256 (303)
T ss_pred             HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhh
Confidence            7764 46788899999999888877766  332111111  111122333333333 45677777888999999999999


Q ss_pred             ccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          157 YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       157 ~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      ...+--+++++++++++|+++++.|++|.++++.|..+-...+++
T Consensus       257 v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  257 VTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999876555443

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.42  E-value=5.9e-13  Score=118.50  Aligned_cols=187  Identities=16%  Similarity=0.177  Sum_probs=138.9

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      .++..||+++.|.++++++++|+++++..+  +.+.          .+....+...|+++.+++|+.||+|+++.|+-..
T Consensus       204 ~if~~e~ft~sKllav~~si~GViiVt~~~--s~~~----------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~  271 (416)
T KOG2765|consen  204 AIFPVERFTLSKLLAVFVSIAGVIIVTMGD--SKQN----------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIG  271 (416)
T ss_pred             HHcCcchhhHHHHHHHHHhhccEEEEEecc--cccc----------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            456689999999999999999998876432  1111          1123345689999999999999999999888765


Q ss_pred             hcChhhH---HHHHHHHHHHHHHHHHHHHhcC-CCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           83 EYPEELM---ATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        83 ~~~~~l~---~t~~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      +....+.   +-.+..++.-+.+.|...+... ....+..+.......+++.++++++++-++|.+++-..+|-.+.+-+
T Consensus       272 ~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tlgm  351 (416)
T KOG2765|consen  272 DEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGM  351 (416)
T ss_pred             cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeee
Confidence            5421222   2223334444444433333221 11122333344566778899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      .++-..|++...++=|.++++.+++|.+.|++|.++++...+.
T Consensus       352 SltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  352 SLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             eEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            9999999999999999999999999999999999988766543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.39  E-value=1.3e-11  Score=107.05  Aligned_cols=176  Identities=11%  Similarity=0.103  Sum_probs=125.3

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ..+++|||+|+.|++++.++.+|+....+..|.                     ..   ...+.=+++|+.|-.+.|+. 
T Consensus       116 G~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~---------------------lp---wval~la~sf~~Ygl~RK~~-  170 (293)
T COG2962         116 GRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS---------------------LP---WVALALALSFGLYGLLRKKL-  170 (293)
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC---------------------Cc---HHHHHHHHHHHHHHHHHHhc-
Confidence            468999999999999999999999988764331                     11   33455678999999884443 


Q ss_pred             hhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchH
Q 026788           82 REYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLG  161 (233)
Q Consensus        82 ~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~  161 (233)
                      + .+ +.+-.+.=++.-....+.+....+.+.+......+..+..++..|+ .|++...++..+-++++-+..+.+.|++
T Consensus       171 ~-v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~  247 (293)
T COG2962         171 K-VD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIE  247 (293)
T ss_pred             C-Cc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            2 33 2222223222222222233223332221011112344666677777 5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhh
Q 026788          162 IVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKM  205 (233)
Q Consensus       162 Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~  205 (233)
                      |..-.+++++++||+++..+.+..++|-.|+.+..+..-++.++
T Consensus       248 Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~  291 (293)
T COG2962         248 PTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK  291 (293)
T ss_pred             HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999998887765544433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.34  E-value=1.2e-13  Score=117.57  Aligned_cols=178  Identities=14%  Similarity=0.154  Sum_probs=139.1

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ...++|.|+++.|+.|+++|..|+++++++            +.|+++++++.+...||++++++|.+||+.++..+.+.
T Consensus       122 sw~fLktrYrlmki~gV~iCi~GvvmvV~s------------DV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflv  189 (336)
T KOG2766|consen  122 SWFFLKTRYRLMKISGVVICIVGVVMVVFS------------DVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLV  189 (336)
T ss_pred             HHHHHHHHHhhheeeeEEeEecceEEEEEe------------eeccccccCCCCCccCcEEEEecceeeeeccccHHHHH
Confidence            357899999999999999999999988753            35667788889999999999999999999999999999


Q ss_pred             hhcChhhHHHHHHHHHHHHHHHHHHHHhcCC-CCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccch
Q 026788           82 REYPEELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL  160 (233)
Q Consensus        82 ~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l  160 (233)
                      |+.+ ..+++....++|+++..+- ++.+.. ...  .+++..+...+. ..++...-|.+-...+|..+++...+-...
T Consensus       190 kn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t--l~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLT  264 (336)
T KOG2766|consen  190 KNAD-RVELMGFLGLFGAIISAIQ-FIFERHHVST--LHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLT  264 (336)
T ss_pred             hcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccceee--EeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhH
Confidence            8875 6788889999999888776 555543 221  112122222222 444556667777788899999988888888


Q ss_pred             HHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          161 GIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       161 ~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .-.++.+.  ..+|-+.+|..++..+.+..|+++-..+
T Consensus       265 sDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  265 SDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            88899888  4566669999999999999998876433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.25  E-value=1.1e-10  Score=102.98  Aligned_cols=139  Identities=13%  Similarity=0.138  Sum_probs=109.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccc--cCCchhHHHHHHHHH
Q 026788           55 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR--LKPDTELIAIGCSAF  132 (233)
Q Consensus        55 ~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gv  132 (233)
                      +...|.++.+++++.|+...+..|.. .+.+ |.++.+++++++.+.+.++.....+ .....  ......+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence            35789999999999999999998764 5564 8899999999998877766543321 11100  0011222 2233566


Q ss_pred             HHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          133 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       133 ~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      ++.++.+.++++++++.+++.+++..+..|++..++++++++|+++..+++|.++.+.|+.++.+
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            67788899999999999999999999999999999999999999999999999999999987653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.18  E-value=5.8e-10  Score=97.53  Aligned_cols=134  Identities=13%  Similarity=0.073  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHH
Q 026788           60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  139 (233)
Q Consensus        60 ~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~  139 (233)
                      .++.++++++||.+.+.+|+..++.+ +  ...+.+..+++.+.++...... ...|+.. +..+......+.......+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLA-QVGWSRL-PATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCc-chhhHHHHHHHHHHHHHHH
Confidence            36789999999999999998766532 3  3455566666666665543211 1122221 1233334444555678889


Q ss_pred             HHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          140 LAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       140 ~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .++++++++.+++.++++.+..|+++.+++++++||+++..+++|.++++.|+.++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999877643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.17  E-value=1e-11  Score=106.41  Aligned_cols=184  Identities=15%  Similarity=0.122  Sum_probs=125.0

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      .+++||||+++...+|.++.+.|+++++-   +.+-+.+   ++...+.+.......|.+..+.+++..|.-.++.|++.
T Consensus       141 aw~~LkE~~t~~eaL~s~itl~GVVLIvR---PpFlFG~---~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iG  214 (346)
T KOG4510|consen  141 AWAFLKEPFTKFEALGSLITLLGVVLIVR---PPFLFGD---TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIG  214 (346)
T ss_pred             HHHHHcCCCcHHHHHHHHHhhheEEEEec---CCcccCC---CccccccccccccCCchHHHHHhHhhhhhHHHHHHHhh
Confidence            46789999999999999999999998752   2211110   00000111112345677777777766665444558887


Q ss_pred             hhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchH
Q 026788           82 REYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLG  161 (233)
Q Consensus        82 ~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~  161 (233)
                      |+.. ......|-.+++.+...+.....+. . +++. ...+|+-++.+|+++ .++..+.+.++|+-.+..+++..+.+
T Consensus       215 k~~h-~~msvsyf~~i~lV~s~I~~~~ig~-~-~lP~-cgkdr~l~~~lGvfg-figQIllTm~lQiErAGpvaim~~~d  289 (346)
T KOG4510|consen  215 KNAH-AIMSVSYFSLITLVVSLIGCASIGA-V-QLPH-CGKDRWLFVNLGVFG-FIGQILLTMGLQIERAGPVAIMTYTD  289 (346)
T ss_pred             cccc-EEEEehHHHHHHHHHHHHHHhhccc-e-ecCc-cccceEEEEEehhhh-hHHHHHHHHHhhhhccCCeehhhHHH
Confidence            7653 3333334444555444443332221 1 1221 224566667788865 78899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          162 IVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       162 Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      -++|.++-++++||.++++.+.|+++|+.+...+.
T Consensus       290 vvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  290 VVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             HHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence            99999999999999999999999999997765544

>TIGR00688 rarD rarD protein

Probab=99.12  E-value=9.2e-10  Score=94.81  Aligned_cols=137  Identities=11%  Similarity=0.144  Sum_probs=107.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCC---CccccCCchh-HHHHHHHHHH
Q 026788           58 IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP---NSWRLKPDTE-LIAIGCSAFF  133 (233)
Q Consensus        58 ~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gv~  133 (233)
                      .|.++.++++++|+...+..|.. .+. +|.+++++.++++++.+.++.....+..   ..++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            47899999999999999998874 456 4899999999999988766654433210   0111001112 3345555654


Q ss_pred             HHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          134 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                       ..+.+.++++++++.+++.++...+..|++++++++++++|+++..+++|.++.+.|+.++..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence             578899999999999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.10  E-value=2.1e-10  Score=89.64  Aligned_cols=122  Identities=13%  Similarity=0.091  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHH
Q 026788           59 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  138 (233)
Q Consensus        59 G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia  138 (233)
                      |-++++.+.++-+...++-|+-.++.++ ...... . .    ..... .  .+           ....+++|+++.+++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~-~----~~~~~-~--~~-----------p~~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F-I----AALLA-F--GL-----------ALRAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H-H----HHHHH-H--hc-----------cHHHHHHHHHHHHHH
Confidence            5678888888888888887776666532 221111 0 0    00000 0  00           122467899999999


Q ss_pred             HHHHHHhhhccCcceeeeccchHHHHHHHHHHH--HhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          139 SLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVT--LLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       139 ~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l--~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      |.+|++++++.+++.+.++..+.++...+.++.  ++||++++.+++|.++|++|++++.+++++
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            999999999999999999999999888888885  899999999999999999999998765443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.01  E-value=1.6e-08  Score=85.60  Aligned_cols=180  Identities=16%  Similarity=0.119  Sum_probs=135.8

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      -++.|++++++|..-+++-++|+++.. ++..-..            .....++..|.++++++-..=+.-...|.++.+
T Consensus       130 Vl~~~KsY~w~kY~cVL~IV~GValFm-YK~~Kv~------------g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira  196 (337)
T KOG1580|consen  130 VLFAHKSYHWRKYCCVLMIVVGVALFM-YKENKVG------------GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRA  196 (337)
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHhh-ccccccC------------CCcccccchHHHHHHHHHHhcccchhHHHHHHH
Confidence            357889999999999999999998864 4422111            123445778999999998888888888888877


Q ss_pred             hcC-hhhHHHHHHHHHHHHHHHHHHHHhcCC--CCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccc
Q 026788           83 EYP-EELMATFICCVFVTIQSTVVALIAERN--PNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKP  159 (233)
Q Consensus        83 ~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~  159 (233)
                      .+. ..-.++.+..+.+.+.+..-.+++++-  ...+...-+..|.-+...++ ++.++.++.+.-+...||-.-|+...
T Consensus       197 ~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTT  275 (337)
T KOG1580|consen  197 SYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTT  275 (337)
T ss_pred             hhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEee
Confidence            663 345677778888877665544444321  00000001234555555666 78999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          160 LGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       160 l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      .--.++++.++++++.+++..||+|..+++.++..=.
T Consensus       276 TRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  276 TRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             hHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999999999999999987643

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.99  E-value=8.7e-09  Score=81.54  Aligned_cols=136  Identities=15%  Similarity=0.199  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh------cChhhHHHHHHHHHHHHHHHHHHHHhcCCCC--cc-ccC------Cchh
Q 026788           59 GGLVLAAGSFFLSLLYIVQTSIIRE------YPEELMATFICCVFVTIQSTVVALIAERNPN--SW-RLK------PDTE  123 (233)
Q Consensus        59 G~ll~l~aa~~~a~y~v~~~~~~~~------~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~--~~-~~~------~~~~  123 (233)
                      |.++.+.|.++.+++.++.|+..++      ..++..+..+....+.+.+.+..++.|....  .. ...      .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6689999999999999999998766      2368899999999999999999888876431  00 000      1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHH
Q 026788          124 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  195 (233)
Q Consensus       124 ~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv  195 (233)
                      +..++..|++. ..-....++.+++.+|...++...+-.+...++|++++||+++..+++|..+.+.|.++-
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            44555556544 455667789999999999999999999999999999999999999999999999998753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.92  E-value=2.2e-08  Score=90.93  Aligned_cols=140  Identities=10%  Similarity=0.067  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHH
Q 026788           57 IIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVA  136 (233)
Q Consensus        57 ~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~  136 (233)
                      ..--+.++..-++|+.+.++.|...+.--+|..+.++-+.++++++.++....++... ++......+..+...|+++ .
T Consensus        12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         12 AVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS-LPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcchHHHHHHHHHHHHHH-H
Confidence            3445778888899999999999887654468889999999999999888766543211 1111113456666677777 4


Q ss_pred             HHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHH------hCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          137 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTL------LGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       137 ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~------lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      +.+.++++++++.+++.++++.++.|++++++++++      ++|+++..+++|.++-++|+.++...
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            566789999999999999999999999999999999      69999999999999999999876653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.87  E-value=5.9e-08  Score=85.39  Aligned_cols=132  Identities=13%  Similarity=0.012  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHH
Q 026788           60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  139 (233)
Q Consensus        60 ~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~  139 (233)
                      .+..+...+.|+...+..|...++. +|..++++.+.++++.+.++.........     ....+......|++...+.+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGHPLP-----TLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----cHHHHHHHHHHHHHHHHHHH
Confidence            3567788999999999988777665 58999999999999888877554332111     12345556667777666778


Q ss_pred             HHHHHhh-hccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          140 LAHTWAC-HKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       140 ~l~~~~l-~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .+++++. ++.+++.+++..++.|+++.+++++ ++|+++..+++|.++.+.|++++.+.
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            8889999 9999999999999999999999985 79999999999999999999887643

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.86  E-value=2.9e-08  Score=85.10  Aligned_cols=119  Identities=9%  Similarity=0.002  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026788           70 LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  149 (233)
Q Consensus        70 ~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~  149 (233)
                      |+...+..|...++..++.....+..+.+.+.+.+.....   .      ....+...+..|.++..+.+.++++++++.
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~---~------~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---P------PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc---c------CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4445555666655444577888888888877776653221   1      112455556677777888999999999999


Q ss_pred             CcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          150 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       150 ~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      +++.+++...++|+++.++++++++|++++.+++|..+.+.|+.++..
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999999999999999999999888654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.81  E-value=1.8e-08  Score=76.62  Aligned_cols=76  Identities=11%  Similarity=0.193  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          124 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       124 ~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      +...+..|+++...++.+|++++++.++ .+++...+.|+++.++++++++|+++..+++|.++++.|+.++.+.+.
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            3334455666666889999999999995 888999999999999999999999999999999999999999877654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.78  E-value=1.1e-07  Score=83.84  Aligned_cols=127  Identities=15%  Similarity=0.118  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHH
Q 026788           60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  139 (233)
Q Consensus        60 ~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~  139 (233)
                      .++.++++++|+...+..|...++. +|..++++.++++++.++++.  ..+. .        .+..+...|+......+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~~-~p~~~~~~R~~~a~~~l~~~~--~~~~-~--------~~~~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHNM-PPLMLAGLRFMLVAFPAIFFV--ARPK-V--------PLNLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHh--cCCC-C--------chHHHHHHHHHHHHHHH
Confidence            3678899999999999999887776 489999999988876655432  1111 1        11122233444444455


Q ss_pred             HHHHHhhhc-cCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          140 LAHTWACHK-KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       140 ~l~~~~l~~-~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .+++.++++ .++..++++.++.|+++.++++++++|+++..+++|.++.+.|+.+..+.
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            567778887 67889999999999999999999999999999999999999999877643

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.77  E-value=1.4e-07  Score=81.31  Aligned_cols=178  Identities=17%  Similarity=0.198  Sum_probs=113.2

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      .+++|+|.++++|+++++-++|++++-......   .+.+++..........+...|.+++++++++-++-.++.++..|
T Consensus        62 ~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~---~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK  138 (244)
T PF04142_consen   62 VLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS---SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLK  138 (244)
T ss_pred             HHHHHcccchhhHHHHHHHHHHHheeecCCccc---cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            468999999999999999999998764321110   00000000000112345689999999999999999999999988


Q ss_pred             hcChhh-HHHHHHHHHHHHHHHHHHHHhcCCC-C---ccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeec
Q 026788           83 EYPEEL-MATFICCVFVTIQSTVVALIAERNP-N---SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMY  157 (233)
Q Consensus        83 ~~~~~l-~~t~~~~~~g~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~  157 (233)
                      +.+.++ .-+..-+++|.++.++.....+... .   .+...+...|..++.     .+++=.+....+|+.+...=...
T Consensus       139 ~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~-----~a~gGllva~v~KyadnI~K~fa  213 (244)
T PF04142_consen  139 RSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFL-----QAIGGLLVAFVLKYADNIVKGFA  213 (244)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHH-----HHHhhHHHHHHHHHHhHHHHHHH
Confidence            764333 3333344455544444433322211 1   111111122333333     33344455667888887777777


Q ss_pred             cchHHHHHHHHHHHHhCCccchhhhhhHHHH
Q 026788          158 KPLGIVFAIIMGVTLLGDTLYLGSVVGATIV  188 (233)
Q Consensus       158 ~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LI  188 (233)
                      ..+.-+.+.+++++++|.+++....+|..+|
T Consensus       214 ~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  214 TAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            8888999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.76  E-value=2.2e-07  Score=81.98  Aligned_cols=119  Identities=10%  Similarity=0.089  Sum_probs=93.5

Q ss_pred             HHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q 026788           73 LYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV  152 (233)
Q Consensus        73 y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~  152 (233)
                      ++++.|...++++.|+.++.+++.++++.+.+............   ....+..++..|++. .+.+.++++++++.+++
T Consensus        17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s   92 (302)
T TIGR00817        17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI---SSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVS   92 (302)
T ss_pred             HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHH
Confidence            45567777777667999999999988876655411111111111   224566777778875 77789999999999999


Q ss_pred             eeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHH
Q 026788          153 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  195 (233)
Q Consensus       153 ~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv  195 (233)
                      .+++...+.|++++++++++++|+++..+++|.++++.|+.+.
T Consensus        93 ~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        93 FTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999764

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.75  E-value=3.5e-07  Score=82.80  Aligned_cols=123  Identities=8%  Similarity=-0.026  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcC-CCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026788           71 SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  149 (233)
Q Consensus        71 a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~  149 (233)
                      ..+++..|...+..|-|++++.++++++.+.+.+... ... ..+... .....+..++-+|++... .|...+.++++.
T Consensus        62 ~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~-~~~~~~~~llp~gl~~~~-~~~~~~~sl~~~  138 (350)
T PTZ00343         62 VLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIK-SLKLFLKNFLPQGLCHLF-VHFGAVISMGLG  138 (350)
T ss_pred             HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCC-CHHHHHHHHHHHHHHHHH-HHHHHHHHHhhc
Confidence            4456677888887765899999999999876554422 211 111111 012345667777887654 477778999999


Q ss_pred             CcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          150 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       150 ~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      +++.+++...++|++++++++++++|+++..++++.+++++|+.+..
T Consensus       139 svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             cHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            99999999999999999999999999999999999999999998765

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.74  E-value=2.2e-07  Score=81.95  Aligned_cols=131  Identities=11%  Similarity=0.029  Sum_probs=96.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHH
Q 026788           58 IGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVAL  137 (233)
Q Consensus        58 ~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~i  137 (233)
                      .+.++.++++++|+...+..|...+..+ |..+.++-+.++++++.++.   .. + .+...   .+..++. +.+....
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~---~~-~-~~~~~---~~~~~~~-~~l~~~~   73 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV---GF-P-RLRQF---PKRYLLA-GGLLFVS   73 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc---cc-c-ccccc---cHHHHHH-HhHHHHH
Confidence            4568899999999999999998888875 89999999999988877642   11 1 11110   1111222 2223333


Q ss_pred             HHHHHHHhhh----ccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          138 RSLAHTWACH----KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       138 a~~l~~~~l~----~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .+.+++.+++    ..++..++++.++.|+++.++++++++|+++..+++|.++.+.|+.+....
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            3444555554    567788889999999999999999999999999999999999999877644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.69  E-value=1.2e-07  Score=72.20  Aligned_cols=67  Identities=12%  Similarity=0.061  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          130 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       130 ~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      .++++.++++.+|.+++++.+.+.+.+...+.|+++.++|++++||++++.+++|.++++.|+.++.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3445667899999999999999999999999999999999999999999999999999999987754

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.60  E-value=1.3e-08  Score=90.49  Aligned_cols=184  Identities=11%  Similarity=0.082  Sum_probs=135.2

Q ss_pred             CcceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 026788            1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSI   80 (233)
Q Consensus         1 ~e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~   80 (233)
                      +|+++.+|++++..++.++.-..|+.+-..  +                  ...-...|.+..+++.++.+...++.+++
T Consensus       126 ~~~~~~~~~~s~~~~lsL~piv~GV~ias~--~------------------e~~fn~~G~i~a~~s~~~~al~~I~~~~l  185 (316)
T KOG1441|consen  126 LSVLLLGKTYSSMTYLSLLPIVFGVAIASV--T------------------ELSFNLFGFISAMISNLAFALRNILSKKL  185 (316)
T ss_pred             HHHHHhCCCCcceEEEEEEEeeeeEEEeee--c------------------cccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            467889999999999888888888865432  1                  11124689999999999999999999998


Q ss_pred             Hhh--c-ChhhHHHHHHHHHHHHHHH-HHHHHhcCCCC-cccc-CCchhHHHHHHHHHHHHHHHHHHHHHhhhccCccee
Q 026788           81 IRE--Y-PEELMATFICCVFVTIQST-VVALIAERNPN-SWRL-KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYV  154 (233)
Q Consensus        81 ~~~--~-~~~l~~t~~~~~~g~l~~~-~~~~~~~~~~~-~~~~-~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~  154 (233)
                      .++  . -+++.+..++.-++.+.++ |.....+++.. .+.. .++......++..+ +...-....++.+.+.+|..-
T Consensus       186 l~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~  264 (316)
T KOG1441|consen  186 LTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSV-LAFLLNLSAFLVIGRTSALTY  264 (316)
T ss_pred             hhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHH-HHHHHHHHHHHHHcccCchhh
Confidence            742  2 1578888888888888888 77666554322 0010 11122333344442 223333455788999999999


Q ss_pred             eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhh
Q 026788          155 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKM  205 (233)
Q Consensus       155 s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~  205 (233)
                      ++...+--++.++.|+++++|++++.+..|+++.++|+++-.+.|.+++++
T Consensus       265 ~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  265 SVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             hhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            999999999999999999999999999999999999999877766655543

>TIGR00803 nst UDP-galactose transporter

Probab=98.56  E-value=2.8e-07  Score=77.90  Aligned_cols=186  Identities=13%  Similarity=0.068  Sum_probs=111.0

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCcc---------ccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPAL---------VSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSL   72 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~   72 (233)
                      +....++|+++.|++++++...|++.-.+++.+..         ...+.++.++  ......+...|....+.+.++-+.
T Consensus        22 ~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~--~~~~~g~~~~g~~~~l~a~~~~~~   99 (222)
T TIGR00803        22 NLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA--KTLMFGNPVVGLSAVLSALLSSGF   99 (222)
T ss_pred             cccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--cccccccHHHHHHHHHHHHHHHhh
Confidence            34567899999999999999999875322211000         0000000000  001112456777778778877777


Q ss_pred             HHHHHHHHHhhcChhhHHHHHHH-HHHHHHHHHHHHHhcC-CC-Cccc--cCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 026788           73 LYIVQTSIIREYPEELMATFICC-VFVTIQSTVVALIAER-NP-NSWR--LKPDTELIAIGCSAFFAVALRSLAHTWACH  147 (233)
Q Consensus        73 y~v~~~~~~~~~~~~l~~t~~~~-~~g~l~~~~~~~~~~~-~~-~~~~--~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~  147 (233)
                      -.+++++..++.+.......++. +++.+ .......... +. ..+.  ...+...+    .-++..+++..+..+.++
T Consensus       100 ~~~y~e~~~k~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~v~~vlk  174 (222)
T TIGR00803       100 AGVYFEKILKDGDTMFWSRNLQLPLFGLF-STFSVLLWSDGTLISNFGFFIGYPTAVW----IVGLLNVGGGLCIGGVVR  174 (222)
T ss_pred             hHHHHHHcccCCCCchHHHHHHHHHHHHH-HHHHHHhhcccchhhccCcccCCchHHH----HHHHHHHhcCceeeehhH
Confidence            77777776555432111111222 22222 1111111111 10 0111  00111111    122345667778999999


Q ss_pred             ccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHH
Q 026788          148 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  194 (233)
Q Consensus       148 ~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~l  194 (233)
                      +.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus       175 ~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       175 YADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            99999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.56  E-value=3.1e-07  Score=80.32  Aligned_cols=187  Identities=17%  Similarity=0.148  Sum_probs=134.8

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ..+..|+|++..+.+-..+--.|+-+....+..+     ++      ......+..+|.+++...-+.=+.-+..|.++.
T Consensus       127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~-----s~------~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf  195 (327)
T KOG1581|consen  127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD-----SS------SKSGRENSPIGILLLFGYLLFDGFTNATQDSLF  195 (327)
T ss_pred             HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC-----Cc------cccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh
Confidence            4567899999999988877778886654332211     00      112334668999999999888888888899888


Q ss_pred             hhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCCccc--cCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           82 REYP-EELMATFICCVFVTIQSTVVALIAERNPNSWR--LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        82 ~~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      +++. ++..++.+..+++++.........++.....+  ..-+..+.-++.... +.+++..+.++-+++.|+-.-+.++
T Consensus       196 ~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~  274 (327)
T KOG1581|consen  196 KKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIM  274 (327)
T ss_pred             ccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHH
Confidence            7643 46788888888888776665332222211111  111223444444444 4578899999999999999999999


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      ..-=.++++++.+++|.++++.|++|..+++.|+++-..-++
T Consensus       275 ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  275 TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence            999999999999999999999999999999999987544333

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.54  E-value=4.7e-06  Score=74.43  Aligned_cols=185  Identities=14%  Similarity=0.115  Sum_probs=116.4

Q ss_pred             eecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026788            4 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIRE   83 (233)
Q Consensus         4 ~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~   83 (233)
                      ++||||.++.||..+++-++|+.++-...... + .       +.......+...|....+.++..-+.-.++-+++.|+
T Consensus       138 l~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~-~-~-------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~  208 (345)
T KOG2234|consen  138 LILRRKLSRLQWMALVLLFAGVALVQLPSLSP-T-G-------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG  208 (345)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC-C-C-------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            57999999999999999999998874211110 0 0       0012334567899999999999999988998998876


Q ss_pred             cChhhHHHHHHH-HHHHHHHHHHHHHhcCCCCcc----ccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           84 YPEELMATFICC-VFVTIQSTVVALIAERNPNSW----RLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        84 ~~~~l~~t~~~~-~~g~l~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      ...++-+--.++ ++|.++.+......+.....|    ...+...|..++-.++.+-.++     ..+|+.+--.=....
T Consensus       209 s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs-----~v~KyADnIlK~f~~  283 (345)
T KOG2234|consen  209 SNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVS-----LVMKYADNILKGFST  283 (345)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHH-----HHHHHhHHHHHHHHH
Confidence            433333322333 334433333332232211112    1222334555555555443333     344444433333444


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhh
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      .+.-+++.+.++.++|-+++....+|..+|+.++++....+.+.
T Consensus       284 s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  284 SVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            47778889999999999999999999999999998877555544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.51  E-value=2.6e-06  Score=73.82  Aligned_cols=206  Identities=14%  Similarity=0.113  Sum_probs=128.5

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      ..+.+|+|++.+|+..+++-.+|+++-+.....+...- .+.--+++.......|..|..++..|-+.-|..-++++..-
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~-~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y  187 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSK-LSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY  187 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhh-hcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999999987654333222110 00000111223344578999999999999999888888877


Q ss_pred             hhcC-hhhHHHHHHHHHHHHHHHHHHH--------HhcCCC---CccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026788           82 REYP-EELMATFICCVFVTIQSTVVAL--------IAERNP---NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  149 (233)
Q Consensus        82 ~~~~-~~l~~t~~~~~~g~l~~~~~~~--------~~~~~~---~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~  149 (233)
                      |++. ++-+..+|+-+..-..++...-        ....+.   +.....-+..|..+++..+ ..-++---.+..-.+.
T Consensus       188 ~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~  266 (330)
T KOG1583|consen  188 QKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTET  266 (330)
T ss_pred             HHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhcee
Confidence            7764 4567777877665544333321        000000   0111112334555544332 2222222223334455


Q ss_pred             CcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHH--hhcchhhhhhhccc
Q 026788          150 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV--IWGQSEEEKMIDDK  209 (233)
Q Consensus       150 ~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv--~~~~~~~~~~~~~~  209 (233)
                      .+-.+++...+--.++.++|.+.+..++++++++|.++++.|-.+.  .|.+.|..|.++++
T Consensus       267 ~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~~~k~~~kk  328 (330)
T KOG1583|consen  267 SSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPKATKGAIKK  328 (330)
T ss_pred             cceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccccccc
Confidence            6777888888999999999999999999999999999999996654  35555544443333

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.49  E-value=4.4e-06  Score=71.76  Aligned_cols=142  Identities=18%  Similarity=0.193  Sum_probs=102.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHH
Q 026788           56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAV  135 (233)
Q Consensus        56 ~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s  135 (233)
                      ...+....+.+++.|+......+...+...+...........+.+...+... .+. ....+..  ..+......+.+..
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~   80 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL-LEP-RGLRPAL--RPWLLLLLLALLGL   80 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhc-ccccccc--cchHHHHHHHHHHH
Confidence            4677888888999999998888877654222344444455555555222221 111 0011111  11334455677778


Q ss_pred             HHHHHHHHHhhhccCcceeeeccchHHHHHHHHHH-HHhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          136 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGV-TLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       136 ~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~-l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      ...+.+|+.++++.++..+++..+..|++..++++ ++++|+++..+++|..+.+.|+.++.+....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            88999999999999999999999999999999997 7779999999999999999999988776543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.37  E-value=5.7e-06  Score=72.16  Aligned_cols=140  Identities=14%  Similarity=0.133  Sum_probs=110.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccc-cCCchhHHHHHHHHHHH
Q 026788           56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR-LKPDTELIAIGCSAFFA  134 (233)
Q Consensus        56 ~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gv~~  134 (233)
                      ...|.++.+.|-+.|+..-.+.|-+ +..+ +.++.++-.+.+..++..+.....+....++ ...+..+......++..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4679999999999999988876654 5554 6788888888888777766655544322111 12234566666666654


Q ss_pred             HHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          135 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       135 s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                       .+-+.+|.|++.+-.+-.+|.=.+++|++-+++|.++++|+++..|++..++..+||..-.|.
T Consensus        83 -~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 -GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             -HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence             678999999999999999999999999999999999999999999999999999999876553

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.31  E-value=6.2e-06  Score=72.72  Aligned_cols=131  Identities=12%  Similarity=0.066  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHH
Q 026788           59 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  138 (233)
Q Consensus        59 G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia  138 (233)
                      |.++.++++++|+..-+..|+.. ..+ +....  .+.+|++.+..+......+.  ...  ...+..-+..|+ .=+++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~--~~~~~~g~l~G~-~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGP-YSQTL--GTTFGALILSIAIAIFVLPE--FWA--LSIFLVGLLSGA-FWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHHHhCCc--ccc--cHHHHHHHHHHH-HHHhh
Confidence            56889999999999888877754 332 22222  45667776666555544221  110  111221111222 24667


Q ss_pred             HHHHHHhhhccCcceeeeccc-hHHHHHHHHHHHHhCCccchhh----hhhHHHHHHHHHHHhhc
Q 026788          139 SLAHTWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGS----VVGATIVAFGFYSVIWG  198 (233)
Q Consensus       139 ~~l~~~~l~~~~~~~~s~~~~-l~Pv~a~i~~~l~lgE~l~~~~----iiG~~LIl~Gv~lv~~~  198 (233)
                      ..+|+.++++.|.+.+-++.+ ++|++..+++.+++||+.+..+    ++|.++++.|++++...
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            799999999999999999888 8999999999999999999999    99999999998886444

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.30  E-value=9.5e-06  Score=70.30  Aligned_cols=180  Identities=12%  Similarity=0.107  Sum_probs=128.1

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKN-WIIGGLVLAAGSFFLSLLYIVQTSII   81 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~G~ll~l~aa~~~a~y~v~~~~~~   81 (233)
                      .++.+.|+...-..+..+-..|+++.++.+..                 .+++ ...|..++-+|-++=|+--.+|++..
T Consensus       151 ifIqGkRY~v~d~~aA~lm~lGli~FTLADs~-----------------~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m  213 (367)
T KOG1582|consen  151 IFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQ-----------------TSPNFNLIGVMMISGALLADAVIGNVQEKAM  213 (367)
T ss_pred             eeeccccccHHHHHHHHHHHHHHHhhhhcccc-----------------cCCCcceeeHHHHHHHHHHHHHhhHHHHHHH
Confidence            35667789999999988999999887764321                 1222 25788888888888888778888888


Q ss_pred             hhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCCcccc--CCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           82 REYP-EELMATFICCVFVTIQSTVVALIAERNPNSWRL--KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        82 ~~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      +.++ +..++.+++..+|.+.++.....+++-.+.|..  .-+....+..+.=-..+-++-....-.++-.|+..++...
T Consensus       214 ~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvT  293 (367)
T KOG1582|consen  214 KMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVT  293 (367)
T ss_pred             hhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHH
Confidence            7765 345677788888888777666555543333431  1111122222111123344444555567778999999999


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      ..--.+++++|++++..++|....-|+.+|++|+++-...+
T Consensus       294 TaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  294 TARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999977655

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.30  E-value=1.5e-05  Score=70.43  Aligned_cols=179  Identities=9%  Similarity=0.072  Sum_probs=133.5

Q ss_pred             CcceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 026788            1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSI   80 (233)
Q Consensus         1 ~e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~   80 (233)
                      .|.+++|.|+++..+..+....+|...-... .                  . .-...|-.|++...++-+.|.+..|+.
T Consensus       120 ~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~-d------------------~-sf~~~gY~w~~~n~~~~a~~~v~~kk~  179 (314)
T KOG1444|consen  120 GEVLFFGKRPSNKVWASVFAMIIGSVAAAFT-D------------------L-SFNLRGYSWALANCLTTAAFVVYVKKS  179 (314)
T ss_pred             hHHhhcCcCchhhHHHHHHHHHHHHHhhccc-c------------------c-eecchhHHHHHHHHHHHHHHHHHHHHh
Confidence            3788999999999999988888888654321 1                  0 112348999999999999999998887


Q ss_pred             HhhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCC------CccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcce
Q 026788           81 IREYP-EELMATFICCVFVTIQSTVVALIAERNP------NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVY  153 (233)
Q Consensus        81 ~~~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~  153 (233)
                      .+... ....+..|..++...++....+++++..      +.|..  ...+..+...++.+-++.|. -.|..+..+++.
T Consensus       180 vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~--~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT  256 (314)
T KOG1444|consen  180 VDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD--SSVLVVMLLSCVMGFGISYT-SFLCTRVNSATT  256 (314)
T ss_pred             hccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc--hhHHHHHHHHHHHHHHHHHH-HHHHHhhccccc
Confidence            65421 2456778999999888888887777522      11221  23466777888888777774 458999999999


Q ss_pred             eeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhh
Q 026788          154 VSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       154 ~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      .++.....-..+.+...++.|++.++..++|..+-++|-.+....++++
T Consensus       257 ~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~  305 (314)
T KOG1444|consen  257 TTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK  305 (314)
T ss_pred             eeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence            9999977888888888888999999999999999887755544444433

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.19  E-value=4.8e-06  Score=64.19  Aligned_cols=69  Identities=20%  Similarity=0.293  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHhhhccCcceeeecc-chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          131 AFFAVALRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       131 gv~~s~ia~~l~~~~l~~~~~~~~s~~~-~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      .+.+-+++|+++.+++|+++.+.+-... .+--+.+.+.+++++||++++.+++|..+|+.|+..++...
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3444578899999999999998887775 58888999999999999999999999999999998876544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.16  E-value=4.6e-05  Score=67.09  Aligned_cols=127  Identities=6%  Similarity=-0.078  Sum_probs=95.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHH
Q 026788           56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAV  135 (233)
Q Consensus        56 ~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s  135 (233)
                      ...|..++++++++|+......|...++.+ |..+.++.++++++++.++......   .+   ....+...+..|+. .
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~~---~~---~~~~~~~~~~~g~~-~   81 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWRL---RF---AKEQRLPLLFYGVS-L   81 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHhc---cC---CHHHHHHHHHHHHH-H
Confidence            467899999999999999999998887775 8899999999999888765422111   11   11344445455654 4


Q ss_pred             HHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          136 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       136 ~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      .+.+.++++++++.+++.++...+..|+++.+++.    |++..  ..+.++.+.|++++.
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~  136 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLL  136 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheee
Confidence            66678899999999999999999999999998873    55543  455667778887654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.15  E-value=4.2e-05  Score=66.67  Aligned_cols=166  Identities=13%  Similarity=0.156  Sum_probs=106.5

Q ss_pred             eecccccCchhhh----HHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 026788            4 LDLRVQSSLAKSI----GTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTS   79 (233)
Q Consensus         4 ~~lke~~s~~~~~----G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~   79 (233)
                      ++|+|+.+...++    ++++-++|+++....+..+            +..+...+...|.+.++++.+.|..|.+..|.
T Consensus        92 ~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~------------~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen   92 LFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS------------DKSSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             hhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc------------cccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            5788988866653    5666677776654321110            00112345678999999999999999999665


Q ss_pred             HHhhcChhhHHHH---HHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeee
Q 026788           80 IIREYPEELMATF---ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSM  156 (233)
Q Consensus        80 ~~~~~~~~l~~t~---~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~  156 (233)
                      .  +. ++.....   ..++.+++.+..+.   +.... .+    ..|..++ .|++ =.++-.++..+.++.|.+.+-.
T Consensus       160 ~--~~-~~~~~~lPqaiGm~i~a~i~~~~~---~~~~~-~k----~~~~nil-~G~~-w~ignl~~~is~~~~G~a~af~  226 (269)
T PF06800_consen  160 F--HV-SGWSAFLPQAIGMLIGAFIFNLFS---KKPFF-EK----KSWKNIL-TGLI-WGIGNLFYLISAQKNGVATAFT  226 (269)
T ss_pred             c--CC-ChhHhHHHHHHHHHHHHHHHhhcc---ccccc-cc----chHHhhH-HHHH-HHHHHHHHHHhHHhccchhhhh
Confidence            3  23 2444333   34445554444332   22111 11    1122222 2221 2567778899999999999999


Q ss_pred             ccchHHHHHHHHHHHHhCCccchh----hhhhHHHHHHHHHH
Q 026788          157 YKPLGIVFAIIMGVTLLGDTLYLG----SVVGATIVAFGFYS  194 (233)
Q Consensus       157 ~~~l~Pv~a~i~~~l~lgE~l~~~----~iiG~~LIl~Gv~l  194 (233)
                      +.-+.++++.+.|.++|||+=+..    .++|.++|+.|..+
T Consensus       227 lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  227 LSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999986644    56788888877543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.07  E-value=1.3e-05  Score=69.81  Aligned_cols=182  Identities=10%  Similarity=0.098  Sum_probs=117.2

Q ss_pred             eecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026788            4 LDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIRE   83 (233)
Q Consensus         4 ~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~   83 (233)
                      -++++++..++|+|+....+|++.+...   +... +  +++    -...++.+.|+++++++-+.-|.-.++.+|..++
T Consensus       132 ~~Ln~ti~~~qWl~i~fv~lGlviVg~~---d~~~-~--~~p----~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~  201 (372)
T KOG3912|consen  132 MFLNRTITGRQWLGILFVSLGLVIVGSL---DVHL-V--TDP----YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKK  201 (372)
T ss_pred             HHHhcccchhhHHHHHHHHhhhheeeee---eccc-c--cCC----ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence            4789999999999999999999876321   1100 0  000    0122456899999999999999999987777765


Q ss_pred             cC-hhhHHHHHHHHHHHHHHHHHHHHhc----C-----CCCc-cccCCchhHH-----HHHHHHHHHHHHHHHHHHH---
Q 026788           84 YP-EELMATFICCVFVTIQSTVVALIAE----R-----NPNS-WRLKPDTELI-----AIGCSAFFAVALRSLAHTW---  144 (233)
Q Consensus        84 ~~-~~l~~t~~~~~~g~l~~~~~~~~~~----~-----~~~~-~~~~~~~~~~-----~l~~~gv~~s~ia~~l~~~---  144 (233)
                      +. +|+....|+.++|-+++.+......    .     ++.. |.. +...|-     -.++..+.+..++-.++|.   
T Consensus       202 ~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD-~~~~~~~~~e~p~l~val~~~~vSiAffNfaGl  280 (372)
T KOG3912|consen  202 SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED-WGDAFAALQESPSLAVALIGFTVSIAFFNFAGL  280 (372)
T ss_pred             ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh-HHHHHHHhcCCchhHHHHhhhhhheeeeeehhh
Confidence            53 6899999999999666655544321    1     1110 100 000010     0123333333333333332   


Q ss_pred             -hhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          145 -ACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       145 -~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                       --+..+++.-.+.-.+-..+-=+++.....|.++..|+.|..+.+.|.++.+
T Consensus       281 sitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  281 SITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             2344566666666666666666777778889999999999999999988754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.97  E-value=0.00012  Score=64.85  Aligned_cols=129  Identities=16%  Similarity=0.144  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHhhcC-h--hhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 026788           72 LLYIVQTSIIREYP-E--ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHK  148 (233)
Q Consensus        72 ~y~v~~~~~~~~~~-~--~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~  148 (233)
                      .|.++++++.++.. .  +..+++.|+++.++...+.......... ..    ..+......++ ...++..+-++++++
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~-~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-RK----IPLKKYAILSF-LFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-Cc----ChHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence            35567777765432 3  6788889998888776666554441111 11    11222333333 346677889999999


Q ss_pred             cCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhhh
Q 026788          149 KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  206 (233)
Q Consensus       149 ~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~~  206 (233)
                      ++...-.++....|+..+++++++++++.+..++++.+++.+|+.+....+.++.++.
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            9999999999999999999999999999999999999999999998777655444433

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.95  E-value=2.4e-05  Score=59.45  Aligned_cols=67  Identities=12%  Similarity=0.126  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHhhhccCcceeeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          133 FAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       133 ~~s~ia~~l~~~~l~~~~~~~~s~~-~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      ++-+++|.++..++++++.+.+-.. .-+--+.+.+.|++++||++++.+++|+.+|+.|+...+..+
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3446778888888888887776555 446778889999999999999999999999999999876544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.93  E-value=0.00016  Score=65.15  Aligned_cols=139  Identities=13%  Similarity=0.103  Sum_probs=93.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHH
Q 026788           57 IIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVA  136 (233)
Q Consensus        57 ~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~  136 (233)
                      ..|.++.++-+.+-.....+.++   +...|...+.+.++.-.+...++.. ..++...+.......|+..+.++++ =+
T Consensus        16 ~lgQ~lsl~~~~t~~~s~~l~~~---~~~~P~~Qs~~~Y~~l~~vy~~~~~-~r~~~~~~~~~~~~~~w~y~lla~~-Dv   90 (334)
T PF06027_consen   16 LLGQVLSLCITGTGTFSSLLANK---GVNIPTFQSFFNYVLLALVYTPILL-YRRGFKKWLKVLKRPWWKYFLLALL-DV   90 (334)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHhc---CccCcHHHHHHHHHHHHHHHhhhhh-hccccccchhhcchhHHHHHHHHHH-HH
Confidence            45556666655555555555444   1223555555555544444443322 2221111111111334444455654 46


Q ss_pred             HHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          137 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       137 ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      .+-++++.+.++.+.+.+.++....-++++++++++|+|+.++.|++|.++.+.|+.++.....
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            7899999999999999999999999999999999999999999999999999999988776643

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.89  E-value=0.00028  Score=55.72  Aligned_cols=131  Identities=13%  Similarity=0.136  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHH
Q 026788           60 GLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRS  139 (233)
Q Consensus        60 ~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~  139 (233)
                      .++.+.+...-++...+..++.++..+|+..+.+.+..|.+.+..+..+.++.  ++....+.+|+..+ -|+++ ++--
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG-~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLG-VFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHH-HHHH
Confidence            46677788888888888888887765588888899999999888887777653  12111112333322 34443 5556


Q ss_pred             HHHHHhhhccCcceeeeccch-HHHHHHHHHHH----HhCCccchhhhhhHHHHHHHHHH
Q 026788          140 LAHTWACHKKGPVYVSMYKPL-GIVFAIIMGVT----LLGDTLYLGSVVGATIVAFGFYS  194 (233)
Q Consensus       140 ~l~~~~l~~~~~~~~s~~~~l-~Pv~a~i~~~l----~lgE~l~~~~iiG~~LIl~Gv~l  194 (233)
                      .+..+.++|+|++.+..+... |-+.+.++..+    .-.+++++.+++|.++++.|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            778889999999888777665 77777777776    23567999999999999999863

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.83  E-value=7e-05  Score=63.35  Aligned_cols=195  Identities=11%  Similarity=0.073  Sum_probs=130.6

Q ss_pred             CcceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 026788            1 MEKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSI   80 (233)
Q Consensus         1 ~e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~   80 (233)
                      +|-++++.|.+-......++.+.--+.-.+.+-+..             .......+.|-+|+...+++-+.|.+..|+.
T Consensus       111 gEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~-------------~~~~~~lN~GY~Wm~~NclssaafVL~mrkr  177 (309)
T COG5070         111 GEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS-------------AFKAQILNPGYLWMFTNCLSSAAFVLIMRKR  177 (309)
T ss_pred             hHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH-------------HHHhcccCCceEEEehhhHhHHHHHHHHHHh
Confidence            366788888887777666665555443332110000             0112245789999999999999999998876


Q ss_pred             HhhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCC-cccc-CCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeec
Q 026788           81 IREYP-EELMATFICCVFVTIQSTVVALIAERNPN-SWRL-KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMY  157 (233)
Q Consensus        81 ~~~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~  157 (233)
                      .+-.. ....-++|..+.+-.+++..++++|.+.+ .... -......++...|+..-++.| +-.|.++-.+.+.-|+.
T Consensus       178 i~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy-~saWcvrVtSSTtySMv  256 (309)
T COG5070         178 IKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY-CSAWCVRVTSSTTYSMV  256 (309)
T ss_pred             hcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh-ccceeEeehhhhHHHHH
Confidence            54211 23566789999999888888888876422 1111 112334566667775545544 77899999999999999


Q ss_pred             cchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhhhccccc
Q 026788          158 KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDI  211 (233)
Q Consensus       158 ~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~~~~~~~  211 (233)
                      ..++-.-.++.|.+++||+.+...+....+-+..-.+  ..-.+++|+|.|+|+
T Consensus       257 GALNKlp~alaGlvffdap~nf~si~sillGflsg~i--Yavaks~k~q~q~~~  308 (309)
T COG5070         257 GALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI--YAVAKSKKQQNQKDP  308 (309)
T ss_pred             HHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCC
Confidence            9999999999999999999999988887776543322  223334445555553

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.69  E-value=4.8e-05  Score=66.09  Aligned_cols=193  Identities=13%  Similarity=0.031  Sum_probs=128.3

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      .+++|+|-+.....++++-+.|--+     |.+-.            ...+.-...|.++...|.++-|+..+.+|+...
T Consensus       147 yvllkqkTs~~~~~~C~lIi~GF~l-----GvdqE------------~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~  209 (347)
T KOG1442|consen  147 YVLLKQKTSFFALGCCLLIILGFGL-----GVDQE------------GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLP  209 (347)
T ss_pred             Hhhcccccccccceeehhheehhee-----ccccc------------cccCccchhhhHHHHHHHHHHHHHHHhhheecc
Confidence            5778888888766665555444321     11000            011223468999999999999999999987654


Q ss_pred             hcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCCccc---cCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc
Q 026788           83 EYP-EELMATFICCVFVTIQSTVVALIAERNPNSWR---LKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK  158 (233)
Q Consensus        83 ~~~-~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~  158 (233)
                      ... .-..+++|..+.+.+.++|...+.++-...+.   .+....|..+...|+++-.++|. -.|-+|-.+|-.=.+..
T Consensus       210 ~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISg  288 (347)
T KOG1442|consen  210 PVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISG  288 (347)
T ss_pred             cccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecH
Confidence            332 24577889999999888887766543111111   11223467777778877666653 23455555555444444


Q ss_pred             chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhhhccccccc
Q 026788          159 PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDS  213 (233)
Q Consensus       159 ~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~~~~~~~~~  213 (233)
                      .---..=.++++.+++|..+..-|-|-++|+.|-....+.|+.|++++.++.+..
T Consensus       289 TAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s~~  343 (347)
T KOG1442|consen  289 TAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRSPA  343 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCCcc
Confidence            4444555688899999999999999999999998888888888888876665543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.65  E-value=4.4e-05  Score=67.82  Aligned_cols=69  Identities=14%  Similarity=0.126  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHhhhccCcceeeeccch-HHHHHHHHHHHHhCCc--cch----hhhhhHHHHHHHHHHHhhcch
Q 026788          132 FFAVALRSLAHTWACHKKGPVYVSMYKPL-GIVFAIIMGVTLLGDT--LYL----GSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       132 v~~s~ia~~l~~~~l~~~~~~~~s~~~~l-~Pv~a~i~~~l~lgE~--l~~----~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      +.+...-....|+++++.+++.+.+..+. -..++++-|.++++|.  .+.    ....|..+++.|+++....|+
T Consensus       220 v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  220 VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            44556667778999999999999888776 4567777778888885  444    345667778888877654443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.64  E-value=0.00073  Score=51.23  Aligned_cols=63  Identities=19%  Similarity=0.160  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHhhhccCcceeeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHh
Q 026788          134 AVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  196 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~~-~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~  196 (233)
                      +-+++|++...++|++|...+-.. .-+--+.+.+.+++++||++++.+++|..+|+.|+...+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            346788899999999988766444 446778889999999999999999999999999998753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.63  E-value=0.00016  Score=54.36  Aligned_cols=64  Identities=22%  Similarity=0.327  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHhhhccCccee-eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          135 VALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       135 s~ia~~l~~~~l~~~~~~~~-s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      -.++|.+..+++|+++...+ +++.-+--+.+++.|++++||++++.+++|..++++|+...+..
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            35678888888888876655 44555677888999999999999999999999999999876654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.60  E-value=0.00079  Score=58.79  Aligned_cols=108  Identities=14%  Similarity=0.190  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeecc-chHHHHHHHHHHH
Q 026788           93 ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVT  171 (233)
Q Consensus        93 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~-~l~Pv~a~i~~~l  171 (233)
                      ..+.+|++.+.++..+..++  .++. +...++.-+..|++ =.++...++++.++.|.+++-++. -+|-+.+.+.+++
T Consensus        17 lG~t~Gali~alv~~~~~~p--~~~~-~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~   92 (269)
T PF06800_consen   17 LGTTIGALIFALVVFLFRQP--AFSM-SGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVL   92 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhCC--Ccch-HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHh
Confidence            44456666666655554432  2221 01234433444553 477899999999999999999998 5677889999999


Q ss_pred             HhCCccchhhh----hhHHHHHHHHHHHhhcchhhhh
Q 026788          172 LLGDTLYLGSV----VGATIVAFGFYSVIWGQSEEEK  204 (233)
Q Consensus       172 ~lgE~l~~~~i----iG~~LIl~Gv~lv~~~~~~~~~  204 (233)
                      +|||--+..+.    ++.++++.|+++..++++++.+
T Consensus        93 ~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   93 FFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             hcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            99997765554    4778888999887776555443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.60  E-value=0.0002  Score=53.91  Aligned_cols=64  Identities=19%  Similarity=0.283  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHhhhccCcceeee-ccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          134 AVALRSLAHTWACHKKGPVYVSM-YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~-~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      +-+++|++...++|++|...+-. +.-+--+.+.+.|++++||++++.+++|..+|+.|+...+.
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            44677888888888888766543 44477888899999999999999999999999999987643

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=97.60  E-value=0.0012  Score=58.33  Aligned_cols=167  Identities=17%  Similarity=0.181  Sum_probs=111.0

Q ss_pred             cccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q 026788            8 VQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP--   85 (233)
Q Consensus         8 e~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~--   85 (233)
                      ||+++.-..-+++-.+|+++++. +.                   .+-...|-.++++|+++-++-=.+++.+.++.|  
T Consensus       134 Ek~~w~L~l~v~lI~~Glflft~-Ks-------------------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~  193 (349)
T KOG1443|consen  134 EKFRWALVLIVLLIAVGLFLFTY-KS-------------------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSA  193 (349)
T ss_pred             HHHHHHHHHHHHHHhhheeEEEe-cc-------------------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccc
Confidence            77777777777777777776653 32                   112467888888888777765555666666543  


Q ss_pred             --hhhHHHHHHHHHHHHHHHHHHHHhcCCCC-----ccccCCc-hhHHHHHHHHHHHHHHHH---HHHHHhhhccCccee
Q 026788           86 --EELMATFICCVFVTIQSTVVALIAERNPN-----SWRLKPD-TELIAIGCSAFFAVALRS---LAHTWACHKKGPVYV  154 (233)
Q Consensus        86 --~~l~~t~~~~~~g~l~~~~~~~~~~~~~~-----~~~~~~~-~~~~~l~~~gv~~s~ia~---~l~~~~l~~~~~~~~  154 (233)
                        +|++......-.-.+.+++..+..|+...     .|....+ ..+..+.+.++. ...+|   ..-+..+.+.+.-..
T Consensus       194 ~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~-g~laF~l~~sEflLl~~Ts~ltl  272 (349)
T KOG1443|consen  194 KRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG-GLLAFLLEFSEFLLLSRTSSLTL  272 (349)
T ss_pred             cCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH-HHHHHHHHHHHHheeeeccceee
Confidence              46666655555556677777777775321     1221111 123333333321 22333   334567788888888


Q ss_pred             eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHH
Q 026788          155 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  195 (233)
Q Consensus       155 s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv  195 (233)
                      +++.-.--+...++|..+++|.++...++|..+...|+..-
T Consensus       273 SIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  273 SIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             eHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            88888899999999999999999999999999999998653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.56  E-value=0.00022  Score=63.37  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=86.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHH
Q 026788           54 KNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFF  133 (233)
Q Consensus        54 ~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~  133 (233)
                      .++..|.++.+.++++.+...+++|+-..|.+. -..-.-+   ..     ...        +.  .+..|.     |+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~---~~-----~~~--------l~--~~~W~~-----G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS---GG-----RSY--------LR--RPLWWI-----GLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc---hh-----hHH--------Hh--hHHHHH-----HHH
Confidence            357899999999999999999999987655431 0000000   00     000        00  011123     333


Q ss_pred             HHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          134 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      ..+++..+..-++...|++.++++..+.-++.++++..++||+++..+++|.++++.|..+...
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            3345556677788889999999999999999999999999999999999999999999876543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.44  E-value=0.00014  Score=63.05  Aligned_cols=134  Identities=13%  Similarity=0.155  Sum_probs=85.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHH-HHHHHHH
Q 026788           56 WIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAI-GCSAFFA  134 (233)
Q Consensus        56 ~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~~  134 (233)
                      ...|.++.-.+ ..+....++.++..+..  |....-..+++--++..+..+ ....+ .+......-|..+ .++|.  
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcli-y~~~~-v~gp~g~R~~LiLRg~mG~--  108 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLI-YYMQP-VIGPEGKRKWLILRGFMGF--  108 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEE-EEeee-eecCCCcEEEEEeehhhhh--
Confidence            46788888888 66666666667766543  444443332221111111111 11111 0111011112111 12233  


Q ss_pred             HHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          135 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       135 s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                        .+.+..+|++++.+-+.++++....|+++++++|++|+|+.+....+|..+-+.|+.+..|.
T Consensus       109 --tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  109 --TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             --hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence              35667788999999999999999999999999999999999999999999999999887664

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.29  E-value=0.00042  Score=50.89  Aligned_cols=55  Identities=24%  Similarity=0.304  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHhhhccCcceeee-ccchHHHHHHHHHHHHhCCccchhhhhhHHHH
Q 026788          134 AVALRSLAHTWACHKKGPVYVSM-YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIV  188 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~-~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LI  188 (233)
                      +-++++.++.+++|+.+.+.+-. +.-+..+...+.|++++||++++.+++|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            45778999999999999998855 45689999999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.21  E-value=0.0029  Score=57.27  Aligned_cols=138  Identities=9%  Similarity=0.010  Sum_probs=88.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHH-----HhcCCC-CccccCCchhHHHHH
Q 026788           55 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVAL-----IAERNP-NSWRLKPDTELIAIG  128 (233)
Q Consensus        55 ~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~-----~~~~~~-~~~~~~~~~~~~~l~  128 (233)
                      +...|.++++++++||+.+.+-+|+ .|+.+  .+.. |- ..+. +..++..     +..++. ......+...+..-+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            4678999999999999999998887 45442  3332 43 1222 2111111     111111 011111122333333


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCcceeeeccc-hHHHHHHHHHHHHhCCcc-------chhhhhhHHHHHHHHHHHhhcc
Q 026788          129 CSAFFAVALRSLAHTWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTL-------YLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       129 ~~gv~~s~ia~~l~~~~l~~~~~~~~s~~~~-l~Pv~a~i~~~l~lgE~l-------~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      ..|++ =.++-..+..++|++|.+.+-++.. ++-+.+.+++.+++||-.       ....++|.+++++|+.+..+..
T Consensus        78 l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         78 LFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            34443 3678999999999999988876654 588899999999999753       2346788999999999887743

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.19  E-value=0.00042  Score=59.79  Aligned_cols=71  Identities=17%  Similarity=0.139  Sum_probs=62.1

Q ss_pred             HHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhhhhhh
Q 026788          136 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  206 (233)
Q Consensus       136 ~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~~~~~  206 (233)
                      .+.-.+.+.++++++|+.-.+..-+..++++++++++|+++++..||++..+..+|+.++........+.+
T Consensus        28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~   98 (244)
T PF04142_consen   28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNS   98 (244)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccc
Confidence            34567788999999999999999999999999999999999999999999999999998877766554443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.16  E-value=0.0095  Score=47.58  Aligned_cols=140  Identities=14%  Similarity=0.114  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHH
Q 026788           57 IIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVA  136 (233)
Q Consensus        57 ~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~  136 (233)
                      ....++.+.+..+-.+..-+..++.+...+|+....+++..|.+.+..+..+.+..+ .+....+..|+.. .-|+++ +
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~-~GG~lG-a   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAW-IGGLLG-A   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHH-Hccchh-h
Confidence            445677778888888888787888776666888888999999999888887755432 1221111223322 123333 2


Q ss_pred             HHHHHHHHhhhccCcceeeecc-chHHHHHHHHHHHHhC----CccchhhhhhHHHHHHHHHHHhhcc
Q 026788          137 LRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLG----DTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       137 ia~~l~~~~l~~~~~~~~s~~~-~l~Pv~a~i~~~l~lg----E~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      +--+.-.....|+|++.+-.+. .-|-+.+.++..+=+.    .++++..++|.+++++|+++..+++
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            2234456678888876554433 3366677777666544    5689999999999999976655543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.01  E-value=0.098  Score=47.43  Aligned_cols=179  Identities=11%  Similarity=0.035  Sum_probs=99.3

Q ss_pred             chhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHH-------HHHHHHH-hh
Q 026788           12 LAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLY-------IVQTSII-RE   83 (233)
Q Consensus        12 ~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~-------v~~~~~~-~~   83 (233)
                      ..-.+|+++.++|+++.......-    ++++   .+....+.++..|.++.+++.+.+++|.       ...+... ..
T Consensus       135 ~~~~~gv~liliGi~l~s~Ag~~k----~~~~---~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g  207 (345)
T PRK13499        135 RMTLLGVLVALIGVAIVGRAGQLK----ERKM---GIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALG  207 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhc----cccc---ccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcC
Confidence            445679999999998876531110    0000   0000134567899999999999999999       4332211 11


Q ss_pred             cChhhHHHHH---HHHHHHHHHHHHHHHh---c-CCCCcc-ccCCc-hh-HHHHHH--HHHHHHHHHHHHHHHhhhccCc
Q 026788           84 YPEELMATFI---CCVFVTIQSTVVALIA---E-RNPNSW-RLKPD-TE-LIAIGC--SAFFAVALRSLAHTWACHKKGP  151 (233)
Q Consensus        84 ~~~~l~~t~~---~~~~g~l~~~~~~~~~---~-~~~~~~-~~~~~-~~-~~~l~~--~gv~~s~ia~~l~~~~l~~~~~  151 (233)
                      . ++.....-   .++.|++....+-...   . ++.... ....+ .. +-..++  ++-+.=.+++..|..+-++.|.
T Consensus       208 ~-~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~  286 (345)
T PRK13499        208 V-DPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGA  286 (345)
T ss_pred             C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2 22222222   3336665554332221   1 111101 11010 11 111111  1111224567778888888876


Q ss_pred             ceeee---cc-chHHHHHHHHHHHHhCCccc------hhhhhhHHHHHHHHHHHhhcc
Q 026788          152 VYVSM---YK-PLGIVFAIIMGVTLLGDTLY------LGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       152 ~~~s~---~~-~l~Pv~a~i~~~l~lgE~l~------~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      .....   +. -+.-+++.+.|. ++||.=+      ...++|.++++.|..++..++
T Consensus       287 ~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        287 QYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             ccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            65544   33 566689999999 5999866      667899999999988776554

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.01  E-value=0.00025  Score=60.75  Aligned_cols=133  Identities=11%  Similarity=0.052  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHH
Q 026788           59 GGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  138 (233)
Q Consensus        59 G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia  138 (233)
                      ..++.++-++.|+..-....|...   +|..-+ ..+.+|++.+.++.++...+...+     ..++.-+..|.+ =.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~-lGtT~GALifaiiv~~~~~p~~T~-----~~~iv~~isG~~-Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQT-LGTTLGALIFAIIVFLFVSPELTL-----TIFIVGFISGAF-WSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhh-hhccHHHHHHHHHHheeecCccch-----hhHHHHHHhhhH-hhhh
Confidence            457788888999987776555432   244443 556678877766655443221111     122222223332 3568


Q ss_pred             HHHHHHhhhccCcceeeeccc-hHHHHHHHHHHHHhCCccchhhh----hhHHHHHHHHHHHhhcchh
Q 026788          139 SLAHTWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       139 ~~l~~~~l~~~~~~~~s~~~~-l~Pv~a~i~~~l~lgE~l~~~~i----iG~~LIl~Gv~lv~~~~~~  201 (233)
                      ...++++++..|++++.+.+. +|-+-+.+++++++||-.+..|+    +..++++.|+++..++++.
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            889999999999999998865 68899999999999998887765    4567778888876555443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=96.54  E-value=0.0049  Score=51.48  Aligned_cols=175  Identities=12%  Similarity=0.099  Sum_probs=105.4

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNELRSPQKNWIIGGLVLAAGSFFLSLLYIVQTSIIR   82 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~   82 (233)
                      .+.++.|+...|++..+++..|++++...+                  ..-.+...|..+..+++..-++|-++-|+...
T Consensus        98 ~IVL~D~~~~~kIlaailAI~GiVmiay~D------------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iG  159 (290)
T KOG4314|consen   98 IIVLGDRFMGFKILAAILAIGGIVMIAYAD------------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIG  159 (290)
T ss_pred             HHHhccchhhhhHHHHHHHhCcEEEEEecc------------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            456899999999999999999998875321                  12235689999999999999999999888765


Q ss_pred             hcChhhHHHHHHHHHHHHHHHHHH------HHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcceeee
Q 026788           83 EYPEELMATFICCVFVTIQSTVVA------LIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSM  156 (233)
Q Consensus        83 ~~~~~l~~t~~~~~~g~l~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~~~s~  156 (233)
                      +.. --...-+.+..|..-+....      .+++  ..+|+......|..+.-.+.+..++ -++.+.++.-..|-..|+
T Consensus       160 nAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~--VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISi  235 (290)
T KOG4314|consen  160 NAN-FGDAAHFMSCLGFFNLCFISFPALILAFTG--VEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISI  235 (290)
T ss_pred             cCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhc--hHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhhee
Confidence            421 11112222223332222211      1111  1123210112354444333333232 234566777777777776


Q ss_pred             ccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          157 YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       157 ~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      -+...-..-.....++=+-..+-...+|.++|..|..+.....
T Consensus       236 G~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  236 GMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             hheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            6665444444556555444567778899999999988766554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.74  E-value=0.0052  Score=54.63  Aligned_cols=192  Identities=13%  Similarity=0.097  Sum_probs=97.5

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHHhcCCccccCCCCCccCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTLYKGPALVSMSSSSNLHNEL--RSPQKNWIIGGLVLAAGSFFLSLLYIVQTS   79 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~G~ll~l~aa~~~a~y~v~~~~   79 (233)
                      .+.++|||.+..-.+|+++|++|-.+++.. +|-.+.   -+++ ...  -..+..+..=..+.++..   .+-..+.++
T Consensus       108 a~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h-aP~e~~---i~t~-~el~~~~~~~~Fliy~~~iil~~---~il~~~~~p  179 (335)
T KOG2922|consen  108 ASFFLKEKLNLLGILGCVLCVVGSTTIVIH-APKEQE---IESV-EEVWELATEPGFLVYVIIIILIV---LILIFFYAP  179 (335)
T ss_pred             HHHHHHHHHHHhhhhheeEEecccEEEEEe-cCcccc---cccH-HHHHHHhcCccHHHHHHHHHHHH---HHHheeecc
Confidence            457899999999999999999999888753 221000   0000 000  001112211111111111   111111111


Q ss_pred             HHhhcChhhHHHHHHHHHHHHHHHH-------HHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccCcc
Q 026788           80 IIREYPEELMATFICCVFVTIQSTV-------VALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV  152 (233)
Q Consensus        80 ~~~~~~~~l~~t~~~~~~g~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~~~  152 (233)
                      . ....+.+.......++|++-..-       +-.....+.+ ..  .+..|..++.... +...-..-.|+|++...++
T Consensus       180 ~-~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~q-l~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fnts  254 (335)
T KOG2922|consen  180 R-YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQ-LF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTS  254 (335)
T ss_pred             c-ccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcc-cc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhh
Confidence            0 11112344444555555332111       1111222221 11  1234444433333 3455555668999999998


Q ss_pred             eeeeccch-HHHHHHHHHHHHhCCcc--chh----hhhhHHHHHHHHHHHhhcchhhhhhh
Q 026788          153 YVSMYKPL-GIVFAIIMGVTLLGDTL--YLG----SVVGATIVAFGFYSVIWGQSEEEKMI  206 (233)
Q Consensus       153 ~~s~~~~l-~Pv~a~i~~~l~lgE~l--~~~----~iiG~~LIl~Gv~lv~~~~~~~~~~~  206 (233)
                      .+++..|. -..++++.|.+.+.|--  +..    .+.|+..++.|+++.++.|+.+.+.+
T Consensus       255 lV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~  315 (335)
T KOG2922|consen  255 IVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLA  315 (335)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecccccccc
Confidence            88887776 56788888888888853  333    45677888899888755544443333

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.41  E-value=0.025  Score=43.11  Aligned_cols=58  Identities=14%  Similarity=0.099  Sum_probs=50.5

Q ss_pred             HHHHHHHHhhhccCcceeeecc-chHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHH
Q 026788          137 LRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  194 (233)
Q Consensus       137 ia~~l~~~~l~~~~~~~~s~~~-~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~l  194 (233)
                      .+-.+|++.+++.+-+.+.+.. .+.=+++++.++++.+|..+...++|+++|+.|+.+
T Consensus        53 ~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   53 SGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3456788899999999999995 888899999998777777888899999999999865

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.39  E-value=0.01  Score=53.14  Aligned_cols=117  Identities=15%  Similarity=0.184  Sum_probs=79.8

Q ss_pred             HHHHHHHHHh--hcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 026788           73 LYIVQTSIIR--EYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKG  150 (233)
Q Consensus        73 y~v~~~~~~~--~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~s~ia~~l~~~~l~~~~  150 (233)
                      ++++.|+..+  ..+-|.+++......+.+.+...-..-..++...  .....+..++-+|++- .++..+=+-++++.+
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~--~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKI--SSKLPLRTLLPLGLVF-CISHVLGNVSLSYVP  108 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcc--ccccchHHHHHHHHHH-HHHHHhcchhhhccc
Confidence            3445666666  4556788888866666665555443322222211  1223466666667754 677888899999999


Q ss_pred             cceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHH
Q 026788          151 PVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGF  192 (233)
Q Consensus       151 ~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv  192 (233)
                      ++..-+.-.++|++.+++++++.+|+.+.........|+.|+
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV  150 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGV  150 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeE
Confidence            999999999999999999999999998876444444444443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.08  E-value=0.0046  Score=54.93  Aligned_cols=125  Identities=14%  Similarity=0.199  Sum_probs=87.0

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHH
Q 026788           52 PQKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSA  131 (233)
Q Consensus        52 ~~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  131 (233)
                      .+.++..|.++.+.+.+..+...++.|+-.+|.. .   ...+.             -+++..-...  +. |    +.|
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~~~ra-------------~~gg~~yl~~--~~-W----w~G   70 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---SGLRA-------------GEGGYGYLKE--PL-W----WAG   70 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---hcccc-------------cCCCcchhhh--HH-H----HHH
Confidence            3556789999999999999999988777655431 1   11110             0111110100  11 2    335


Q ss_pred             HHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          132 FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       132 v~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      ++..+++=..-+-+....+++.++++..+.-++.++++..+++|++++...+|+++.++|-.+......
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP  139 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP  139 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence            555566666666667778999999999999999999999999999999999999999999655444333

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=94.18  E-value=1.7  Score=39.30  Aligned_cols=61  Identities=15%  Similarity=0.023  Sum_probs=55.3

Q ss_pred             HHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          139 SLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       139 ~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      -.+++.+.++++|+.-.+..-+--+.++++++++|+++++..||...++..+|+.+++...
T Consensus       106 Nnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen  106 NNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             hhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            3477888899999999999999999999999999999999999999999999999988443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.12  E-value=0.031  Score=50.78  Aligned_cols=67  Identities=13%  Similarity=0.182  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchhh
Q 026788          136 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       136 ~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      .+|-+.++-++++..++...+.....-+++..+|.++.+|++++...++.++-+.|++++..++.++
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            5677888999999999999999999999999999999999999999999999999999988776544

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.40  E-value=0.035  Score=46.47  Aligned_cols=61  Identities=16%  Similarity=0.186  Sum_probs=55.5

Q ss_pred             HHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          138 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       138 a~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      +-+.|..++++++|+.++.+...+-.+..++++++||+++....++..++.+.|+.+..+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            4668999999999999999999999999999999999999999999999999998665443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=92.02  E-value=2  Score=38.79  Aligned_cols=140  Identities=14%  Similarity=0.110  Sum_probs=77.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHH-HHHHHHHHHHHHHHHHH--HhcCCCC-ccccCCchhHHHHHHH
Q 026788           55 NWIIGGLVLAAGSFFLSLLYIVQTSIIREYPEELMA-TFICCVFVTIQSTVVAL--IAERNPN-SWRLKPDTELIAIGCS  130 (233)
Q Consensus        55 ~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~~~l~~-t~~~~~~g~l~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~  130 (233)
                      ....|.++..+++++-+.+.+=.||. |+.+  .+. -..+.+++=++ .|...  ..-++.. .....+...+......
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            35799999999999999988876765 3442  222 22233333322 22222  1111111 1111111233333333


Q ss_pred             HHHHHHHHHHHHHHhhhccCcceee-eccchHHHHHHHHHHHHhCC-------ccchhhhhhHHHHHHHHHHHhhcc
Q 026788          131 AFFAVALRSLAHTWACHKKGPVYVS-MYKPLGIVFAIIMGVTLLGD-------TLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       131 gv~~s~ia~~l~~~~l~~~~~~~~s-~~~~l~Pv~a~i~~~l~lgE-------~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      |++ =+++=..|-.++|++|.+... +..-+.-+++.++--++.|+       +-....++|.++.++|+.+.-+..
T Consensus        80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            443 256667888899999986543 33334444555554444332       223467889999999998876653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=91.66  E-value=0.35  Score=42.05  Aligned_cols=25  Identities=20%  Similarity=0.110  Sum_probs=18.3

Q ss_pred             chhhhhhHHHHHHHHHHHhhcchhh
Q 026788          178 YLGSVVGATIVAFGFYSVIWGQSEE  202 (233)
Q Consensus       178 ~~~~iiG~~LIl~Gv~lv~~~~~~~  202 (233)
                      .+...+|.+++++|..+...-|..+
T Consensus       115 ~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen  115 PWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hHHHHHHHHHHHHHHHheeeecCCC
Confidence            5678899999999887765544433

The region concerned is approximately 280 residues long.

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=90.79  E-value=0.22  Score=37.26  Aligned_cols=30  Identities=17%  Similarity=0.150  Sum_probs=26.8

Q ss_pred             HHHHHHHhCCccchhhhhhHHHHHHHHHHH
Q 026788          166 IIMGVTLLGDTLYLGSVVGATIVAFGFYSV  195 (233)
Q Consensus       166 ~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv  195 (233)
                      +.+++++++|++++++.+|.++++.+++.+
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            467889999999999999999999998764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=90.48  E-value=0.057  Score=46.59  Aligned_cols=130  Identities=15%  Similarity=0.147  Sum_probs=85.3

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHH
Q 026788           53 QKNWIIGGLVLAAGSFFLSLLYIVQTSIIREYP--EELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCS  130 (233)
Q Consensus        53 ~~~~~~G~ll~l~aa~~~a~y~v~~~~~~~~~~--~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  130 (233)
                      ..+...|...++.+.+.|-.|.++.+...  .+  +.+--.+..|.++++.+....   + +...-+    ..|..++ -
T Consensus       147 ~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~saiLPqAiGMv~~ali~~~~~---~-~~~~~K----~t~~nii-~  215 (288)
T COG4975         147 PSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSAILPQAIGMVIGALILGFFK---M-EKRFNK----YTWLNII-P  215 (288)
T ss_pred             hHhhhhheeeeeeeccceeeeEeeecccc--ccchhhhhHHHHHHHHHHHHHhhcc---c-ccchHH----HHHHHHh-h
Confidence            34567899999999999999999866542  21  223334566667766544321   1 111001    1222221 2


Q ss_pred             HHHHHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhh----hhhHHHHHHHHHH
Q 026788          131 AFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGS----VVGATIVAFGFYS  194 (233)
Q Consensus       131 gv~~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~----iiG~~LIl~Gv~l  194 (233)
                      |+. =+++-..+..+.++.|.+..=.++-+-.+++.+-|.++|+|+=|..+    ++|.++++.|..+
T Consensus       216 G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         216 GLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            222 24567777888899998888788888889999999999999877665    5678888877554

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=88.92  E-value=2.5  Score=39.51  Aligned_cols=71  Identities=10%  Similarity=0.055  Sum_probs=42.4

Q ss_pred             hHHHHHHHHHHHHhCCcc-chhhhhhHHHHHHHHHHHhhcchhhhh------hhcccccccc-CCCCCCCcccccccccc
Q 026788          160 LGIVFAIIMGVTLLGDTL-YLGSVVGATIVAFGFYSVIWGQSEEEK------MIDDKDIDSL-KSSSPKAPLLQTKSIFC  231 (233)
Q Consensus       160 l~Pv~a~i~~~l~lgE~l-~~~~iiG~~LIl~Gv~lv~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~  231 (233)
                      +.|+++.+ +++..+-.. ...-.-|++-+++|+++..+.|+++++      |+-++|+..+ ++.+++++ |++|.||+
T Consensus       168 l~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~-ls~~~i~~  245 (448)
T COG2271         168 LAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEG-LTAWQIFV  245 (448)
T ss_pred             hHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCC-ccHHHHHH
Confidence            55666555 666655333 333455666677888887776666542      2334455444 44455555 88888886


Q ss_pred             c
Q 026788          232 R  232 (233)
Q Consensus       232 ~  232 (233)
                      +
T Consensus       246 ~  246 (448)
T COG2271         246 K  246 (448)
T ss_pred             H
Confidence            4

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.62  E-value=0.99  Score=33.47  Aligned_cols=33  Identities=12%  Similarity=0.111  Sum_probs=29.0

Q ss_pred             HHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          165 AIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       165 a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      -+.+|++.++|++.|.++.|..++..|++.+.+
T Consensus        83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr  115 (116)
T COG3169          83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR  115 (116)
T ss_pred             HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence            356899999999999999999999999987654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=88.25  E-value=12  Score=33.46  Aligned_cols=116  Identities=12%  Similarity=0.167  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHhhcC--hhhHHHHHHHHHHHHHHHHHHHHh--cCCCCccccCCchhH--HHHHHHHHHHHHHHHHHHHHh
Q 026788           72 LLYIVQTSIIREYP--EELMATFICCVFVTIQSTVVALIA--ERNPNSWRLKPDTEL--IAIGCSAFFAVALRSLAHTWA  145 (233)
Q Consensus        72 ~y~v~~~~~~~~~~--~~l~~t~~~~~~g~l~~~~~~~~~--~~~~~~~~~~~~~~~--~~l~~~gv~~s~ia~~l~~~~  145 (233)
                      ..++..|.....++  ..+.+..+|++...+.+......-  +.++-.|..  ..-|  ..++|.+-+-|+      .++
T Consensus        26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~--~kk~~P~~~lf~~~i~t~------~~s   97 (314)
T KOG1444|consen   26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRT--AKKWFPVSLLFVGMLFTG------SKS   97 (314)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHH--HHHHccHHHHHHHHHHHc------ccc
Confidence            34455555555554  344555589988877665554321  222222321  1223  345555443333      468


Q ss_pred             hhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHH
Q 026788          146 CHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  195 (233)
Q Consensus       146 l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv  195 (233)
                      +++++.....++-.+.|+..++....++|.+++...+....++++|-...
T Consensus        98 lk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~  147 (314)
T KOG1444|consen   98 LKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAA  147 (314)
T ss_pred             ccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999999999999999999998886553

>PRK02237 hypothetical protein; Provisional

Probab=86.50  E-value=2.4  Score=31.91  Aligned_cols=38  Identities=13%  Similarity=0.107  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          163 VFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       163 v~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      +.+.+.++.+-|++|+..+++|.++.+.|+.+..+..+
T Consensus        71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            34557788888999999999999999999987766543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=85.15  E-value=1.9  Score=37.33  Aligned_cols=131  Identities=16%  Similarity=0.139  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHhh-cC----------hhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCchhHHHHHHHHHH
Q 026788           65 AGSFFLSLLYIVQTSIIRE-YP----------EELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFF  133 (233)
Q Consensus        65 ~aa~~~a~y~v~~~~~~~~-~~----------~~l~~t~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~  133 (233)
                      +--+||=.|-+.|+|+.+. |.          -.+.+.++||..-.++.=....+.....  ... + ..+......  .
T Consensus        20 GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~--~D~-t-~~~~YaAcs--~   93 (337)
T KOG1580|consen   20 GIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTE--IDN-T-PTKMYAACS--A   93 (337)
T ss_pred             chhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccc--ccC-C-cchHHHHHH--H
Confidence            3346888899999998753 21          1355666777776655433222222111  110 0 122221110  0


Q ss_pred             HHHHHHHHHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcchh
Q 026788          134 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  201 (233)
Q Consensus       134 ~s~ia~~l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~~  201 (233)
                      .-..+...-|.++|..+=-..-+--..-|+=.+++|+++.+.+-+|....=..+|++|+.+....+++
T Consensus        94 sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   94 SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            11334555677888877544445555677888899999999999999999999999999887766443

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=84.98  E-value=21  Score=29.70  Aligned_cols=32  Identities=16%  Similarity=0.213  Sum_probs=22.5

Q ss_pred             HHHHHHHhCCccchhhhhhHHHHH--HHHHHHhh
Q 026788          166 IIMGVTLLGDTLYLGSVVGATIVA--FGFYSVIW  197 (233)
Q Consensus       166 ~i~~~l~lgE~l~~~~iiG~~LIl--~Gv~lv~~  197 (233)
                      -.+|..++++-.-+.+++|.+|.+  .|.....+
T Consensus       133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~  166 (198)
T PRK06638        133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR  166 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            455788888888888999988866  44443333

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=81.73  E-value=1.8  Score=32.53  Aligned_cols=37  Identities=16%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             HHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcch
Q 026788          164 FAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  200 (233)
Q Consensus       164 ~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~~  200 (233)
                      .+.+.++.+=|++|+..+++|..+.+.|+.+..+..+
T Consensus        70 ~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   70 ASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            4556788888999999999999999999988766543

; GO: 0016020 membrane

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=81.04  E-value=29  Score=33.24  Aligned_cols=44  Identities=2%  Similarity=-0.124  Sum_probs=23.4

Q ss_pred             eeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          155 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       155 s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      ..+....|+-+.+.|.+.=.-.++....++++.++++..+..+.
T Consensus       350 ~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~  393 (524)
T PF05977_consen  350 MVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF  393 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555678888888876533333333344444444444444333

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=80.34  E-value=1.8  Score=38.27  Aligned_cols=57  Identities=16%  Similarity=0.124  Sum_probs=43.7

Q ss_pred             HHHHhhhccCcceeeeccchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhh
Q 026788          141 AHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  197 (233)
Q Consensus       141 l~~~~l~~~~~~~~s~~~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~  197 (233)
                      +.+-++....++.--+..--.-++..+++.-+|+.+++..||+|+..+.+|+.++-.
T Consensus       102 lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen  102 LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            334444445555555555567789999999999999999999999999999877543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	233
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.36
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.91
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	87.02
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	80.02

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.36  E-value=6.7e-13  Score=103.59  Aligned_cols=70  Identities=11%  Similarity=0.126  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHhhhccCcceeeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhcc
Q 026788          130 SAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  199 (233)
Q Consensus       130 ~gv~~s~ia~~l~~~~l~~~~~~~~s~~-~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~~  199 (233)
                      +++++++++|++|++++++.+++.+.++ ..+.|++++++|++++||++++.+++|+++|++|++++.+.+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5777889999999999999999999999 899999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.91  E-value=2.3e-09  Score=80.32  Aligned_cols=69  Identities=12%  Similarity=0.127  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHhhhccCcceeeec-cchHHHHHHHHHHHHhCCccchhhhhhHHHHHHHHHHHhhc
Q 026788          130 SAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  198 (233)
Q Consensus       130 ~gv~~s~ia~~l~~~~l~~~~~~~~s~~-~~l~Pv~a~i~~~l~lgE~l~~~~iiG~~LIl~Gv~lv~~~  198 (233)
                      .++++.+++|.+|.+++|+.+.+.+.++ ..+.|+.+.+++++++||++++.+++|.++|+.|+++....
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4666778999999999999999999888 79999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=87.02  E-value=0.2  Score=36.61  Aligned_cols=29  Identities=28%  Similarity=0.261  Sum_probs=25.7

Q ss_pred             cceecccccCchhhhHHHHHHHHHHHHHH
Q 026788            2 EKLDLRVQSSLAKSIGTMVSIAGALTVTL   30 (233)
Q Consensus         2 e~~~lke~~s~~~~~G~~la~~G~~~l~~   30 (233)
                      ..+++||++++.+++|+.+.++|++++..
T Consensus        75 ~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           75 SWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            35789999999999999999999988753

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=80.02  E-value=0.63  Score=35.46  Aligned_cols=28  Identities=29%  Similarity=0.268  Sum_probs=19.6

Q ss_pred             ceecccccCchhhhHHHHHHHHHHHHHH
Q 026788            3 KLDLRVQSSLAKSIGTMVSIAGALTVTL   30 (233)
Q Consensus         3 ~~~lke~~s~~~~~G~~la~~G~~~l~~   30 (233)
                      .++++|+++..+++|+++.++|++++..
T Consensus        76 ~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           76 WGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4689999999999999999999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	233
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	83.66

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=9  Score=30.43  Aligned_cols=28  Identities=11%  Similarity=-0.103  Sum_probs=14.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCccee
Q 026788          127 IGCSAFFAVALRSLAHTWACHKKGPVYV  154 (233)
Q Consensus       127 l~~~gv~~s~ia~~l~~~~l~~~~~~~~  154 (233)
                      ....|..........+.+..+..+....
T Consensus       350 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~  377 (447)
T d1pw4a_         350 MIVIGFLIYGPVMLIGLHALELAPKKAA  377 (447)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTSCTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence            3344444444444556666666665543