BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026789
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Query: 25 HVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTS 84
+ VGD W P + P Y+ WA +TF VGD L F+FAAG HDV V++++F C
Sbjct: 25 YDVGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEK 83
Query: 85 PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSARGSSPAPQPSSPAPQPSG 144
P+S T P + L +GP YFIC+ HC GQKL+I V A G++ P + A G
Sbjct: 84 PISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATPAPG 143
Query: 145 STPS 148
STPS
Sbjct: 144 STPS 147
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Query: 7 LAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGN 66
+A ++ L + A V G + W +PP+ +++ WA F VGD +VF + +G
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73
Query: 67 HDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 126
V VT+ ++N+CNTT+PL+ T+ V L SGP YFI GHC GQKL++ V
Sbjct: 74 DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV-- 131
Query: 127 RGSSPAPQPSSPAPQPSGSTPSPVPAPA 154
SP SPAP P P APA
Sbjct: 132 --ISPRHSVISPAPSPVEFEDGPALAPA 157
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 200 VGGALG-WTVPPNASVGYQNWARNNNFSVGDIL 231
VGG G W +PP++S + WA+ F VGD +
Sbjct: 33 VGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFI 65
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 6 FLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG 65
FL AI AL +T T VGD GW++ + YS WA+++TF VGD+LVFN+ AG
Sbjct: 11 FLLAIINMALPSLATVYT---VGDTSGWVIGGD----YSTWASDKTFAVGDSLVFNYGAG 63
Query: 66 NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
H V V +S + +C + + +S + ++ L +G HYFIC PGH GG KL+I V
Sbjct: 64 AHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 27 VGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPL 86
VG + W P + P Y WA +TF VGD L F+FAAG HDV VT+ +F+ C +P+
Sbjct: 5 VGGDMEWKRPSD-PKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPI 63
Query: 87 SRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
S T P + L +GP Y+IC+ HC GQKL+INV
Sbjct: 64 SHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 23 TRHVVGDALGWIVPPNGPATYS-NWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACN 81
T + VGD+ GW VP G Y WA+N+TF +GD LVF + H+V +VTQ ++ +CN
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 82 TTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSAR 127
T+P++ + L G Y+IC P HC GQK+ INV+ R
Sbjct: 61 DTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVTVR 106
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 198 HVVGGALGWTVPPNASVGYQ-NWARNNNFSVGDIL 231
+ VG + GW VP V Y WA N F +GD+L
Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVL 37
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRV-TQSSFNACN 81
T H+VGD GW VP P YS WAA +TF VGD+L FNF A H+V + T+ SF+ACN
Sbjct: 3 TVHIVGDNTGWSVPS-SPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 61
Query: 82 ---TTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 126
+ + + RT SP L G HYF+C+ HC GQKL+INV A
Sbjct: 62 FVNSDNDVERT--SPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 194 QPATHVVGGALGWTVP--PNASVGYQNWARNNNFSVGDIL 231
Q H+VG GW+VP PN Y WA F VGD L
Sbjct: 1 QSTVHIVGDNTGWSVPSSPNF---YSQWAAGKTFRVGDSL 37
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNT 82
T H VGD+ GW P Y+ WA++ F VGD+L+FN+ H+V +V Q F +CN+
Sbjct: 2 TVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNS 59
Query: 83 TSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125
+SP + T+ S+ L G YF+C PGHC GQK+ I V
Sbjct: 60 SSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Query: 197 THVVGGALGWT--VPPNASVGYQNWARNNNFSVGDIL 231
H VG + GWT VP + Y WA +N F VGD L
Sbjct: 3 VHKVGDSTGWTTLVPYD----YAKWASSNKFHVGDSL 35
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 5 FFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA 64
FF ++++ L S A+ + VG + W+ P P Y +W+ F V DTL F++A
Sbjct: 12 FFTILLSLSTLFTISNAR-KFNVGGSGAWVTNP--PENYESWSGKNRFLVHDTLYFSYAK 68
Query: 65 GNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKL-AIN 123
G V V ++ ++ACNT +P+ R + + ++L GP YFI +C GQKL +
Sbjct: 69 GADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVV 128
Query: 124 VSARGSSPAPQPSSPAP 140
+SAR S A P + AP
Sbjct: 129 ISARIPSTAQSPHAAAP 145
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 43 YSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG 102
YS WA +TF VGD L F + + +H V V ++ ++ C+ +S ++ + L G
Sbjct: 42 YSGWATGKTFRVGDILEFKYGS-SHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVG 100
Query: 103 PHYFICSFPGHCL--GGQKLAINVSA 126
+YFICS PGHC GG KLA+NV A
Sbjct: 101 INYFICSTPGHCRTNGGMKLAVNVVA 126
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 5 FFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA 64
FFL + LV S + V G W +P + + + WA + F VGDTLV+ +
Sbjct: 10 FFLIFFLLTNLVCS---KEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDE 66
Query: 65 GNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
V +VT+ ++ CNTT+P + +N V L SGP++FI +C+ G+KL I V
Sbjct: 67 EKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVV 126
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 5 FFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA 64
+F+A + + A+ SS A + G GW+V P +++ WA F V DT+VF
Sbjct: 12 WFMAVLGLVAVFSSSEAYVFYA-GGRDGWVVDP--AESFNYWAERNRFQVNDTIVFL--- 65
Query: 65 GNHD------VTRVTQSSFNACNTTSPLSRTTNSPAS---VTLTASGPHYFICSFPGHCL 115
HD V +VT+ F+ C+T +P+ R + A SGP +FI C
Sbjct: 66 --HDDEVGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQ 123
Query: 116 GGQKLAINVSARGSSPAPQPSSPAPQPSGS 145
GQKL I V A P S AP+P+G+
Sbjct: 124 KGQKLYIIVMA----VRPTKPSEAPEPAGA 149
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 25 HVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTS 84
+ VGD GW +G W A +TF GD LVF + H+V V + +C T S
Sbjct: 33 YTVGDGGGWTFGTSG------WPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSC-TAS 85
Query: 85 PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAI 122
P SR S + G +YFICS PGHC GG K+A+
Sbjct: 86 PGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAV 123
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 6 FLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG 65
FL +A+ L+ +S A+ V G W P + P + S+WA + F +GDTL+F +
Sbjct: 11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKR 70
Query: 66 NHDVTRVTQSSFNACNTTSPLSRTTN-SPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
V ++ + CNT N V LT G +FI HC G KLA+ V
Sbjct: 71 TESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 130
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 25 HVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTS 84
+VVG + GW +W + F GD L+FN+ H+V V Q F+ CNT +
Sbjct: 3 YVVGGSGGWTFNT------ESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPA 56
Query: 85 PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAIN 123
T+ + L G YFIC+FPGHC G K+A+N
Sbjct: 57 GAKVYTSGRDQIKL-PKGQSYFICNFPGHCQSGMKIAVN 94
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 7 LAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGN 66
L A+++ L + VGD+ W G W + F GD LVFN+
Sbjct: 18 LMAVSVLLLQADYVQAATYTVGDSGIWTFNAVG------WPKGKHFRAGDVLVFNYNPRM 71
Query: 67 HDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAI 122
H+V +V S+N C T + T+ +TL+ G ++FIC+FP HC K+A+
Sbjct: 72 HNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLS-KGQNFFICNFPNHCESDMKIAV 126
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 6 FLAAIAIAALVQSSTAQTRHVVGDALG-WIVPPNGPATYSNWAANQTFTVGDTLVFNFAA 64
L I L+ S + T +++GD+ W VP ++ WA+ FTVGDT++F +
Sbjct: 8 LLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYDN 67
Query: 65 GNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
V V + + C+T + V L G ++FI HC G KLA+ V
Sbjct: 68 ETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVVV 127
Query: 125 SARGSSPAP 133
+ P
Sbjct: 128 QNKHDLVLP 136
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 4 RF--FLAAIAIAALVQS---STAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTL 58
RF + A+ +A L+ + ++ VG+ W PN Y+ WA + F +GD L
Sbjct: 3 RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFW--NPN--INYTIWAQGKHFYLGDWL 58
Query: 59 VFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG-PHYFICSFPGHCLGG 117
F F H++ V ++ + C P+ T +T + HY++ G C GG
Sbjct: 59 YFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGG 118
Query: 118 QKLAINVSARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPA 160
KL++ V P P AP + + S V A+ P
Sbjct: 119 MKLSVKV-----EKLPPPPKSAPVKNIGSVSMVTGLAQFMIPV 156
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 6 FLAAIAIAALVQSSTAQTRHVVGDALG-WIVPPNGPATYSNWAANQTFTVGDTLVFNFAA 64
L I ++ S + T ++VGD+ W P + WA+N F VGDT+ F +
Sbjct: 8 LLMFIFSIWMLISYSESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNN 67
Query: 65 GNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124
V V + ++ C + V L +G H+FI HC G KLA+ V
Sbjct: 68 KTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVV 127
>sp|Q5KSL6|DGKK_HUMAN Diacylglycerol kinase kappa OS=Homo sapiens GN=DGKK PE=1 SV=1
Length = 1271
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 145 STPSPVPAPARTPTPAPAP------APEPATTPTPAPAS--APTPTPRSAPTPAPTRQP 195
S P P P PA P PAP APE A PTP P + AP P +AP P+ P
Sbjct: 121 SAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAP 179
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 132 APQPSSPAPQPS-GSTPSPVP--APARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAPT 188
AP+P+ P+P+ S P P P P P AP P PEP T AP P P P+
Sbjct: 122 APEPT---PEPALESVPEPAPELTPEVAPELAPEPTPEPVT--ELAPEFCPEAAPEFRPS 176
Query: 189 PAP 191
PAP
Sbjct: 177 PAP 179
Score = 40.0 bits (92), Expect = 0.015, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 34/102 (33%), Gaps = 34/102 (33%)
Query: 130 SPAPQPSSPAPQPSGSTPSPVPAPARTPTP------------------------------ 159
+P P P + + + P P PA P
Sbjct: 62 APGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATES 121
Query: 160 APAPAPEPA--TTPTPAPASAPTPTPRSAPTPAPTRQPATHV 199
AP P PEPA + P PAP P P AP P P +P T +
Sbjct: 122 APEPTPEPALESVPEPAPELTPEVAPELAPEPTP--EPVTEL 161
>sp|Q9JKS4|LDB3_MOUSE LIM domain-binding protein 3 OS=Mus musculus GN=Ldb3 PE=1 SV=1
Length = 723
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 148 SPVPAPARTPTPAPA--PAPEPATTPTPAPASAPTPTPRSAPTPA 190
+P PAPA TP+PAP P+P P +P+PAPA P+P P PTP+
Sbjct: 426 TPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPS 470
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 128 GSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAP--APAPEPATTPTPAPASAPTPT 182
G++ +P P +P+P P+ + P PAP TP+PAP +P+P PA TP+PAP PTP+
Sbjct: 417 GANYSPTPYTPSPAPAYT---PSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPS 470
>sp|Q99109|REP1_USTMA Repellent protein 1 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=REP1 PE=1 SV=1
Length = 652
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 157 PTPAPAPAPEPATTPTPAPASAPTPTPRSAPTPAPT 192
PT P P P+P+ P P P+ P P P P P P+
Sbjct: 505 PTTKPEPKPQPSDKPEPKPSDKPEPKPSDKPEPKPS 540
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 145 STPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTP 183
T P P P P+ P P+P+ P P P+ P P P
Sbjct: 501 DTSKPTTKPEPKPQPSDKPEPKPSDKPEPKPSDKPEPKP 539
>sp|O75112|LDB3_HUMAN LIM domain-binding protein 3 OS=Homo sapiens GN=LDB3 PE=1 SV=2
Length = 727
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 119 KLAINVSARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPA--PAPEPATTPTPAPA 176
++ S R S P P+S G+ SP P TP+PAPA P+P PA TP+P P
Sbjct: 396 RVVTTASIRPSVYQPVPASTYSPSPGANYSPTP---YTPSPAPAYTPSPAPAYTPSPVPT 452
Query: 177 SAPTPTPRSAPTPAPTRQPATHV 199
P+P P P+PAP PA V
Sbjct: 453 YTPSPAPAYTPSPAPNYNPAPSV 475
>sp|C0ZYA5|IF2_RHOE4 Translation initiation factor IF-2 OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=infB PE=3 SV=1
Length = 981
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Query: 128 GSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAP 187
G PAP P P P P P P P P P P P+P S P PR P
Sbjct: 218 GPRPAPGQGGPRPAPGQGGPRPAPGQG-----GPRP-PAGQGGPRPSPGSMP---PRPNP 268
Query: 188 TPAPTR 193
P R
Sbjct: 269 GAMPAR 274
>sp|B2HKS2|IF2_MYCMM Translation initiation factor IF-2 OS=Mycobacterium marinum (strain
ATCC BAA-535 / M) GN=infB PE=3 SV=1
Length = 947
Score = 35.8 bits (81), Expect = 0.29, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 34/97 (35%), Gaps = 27/97 (27%)
Query: 128 GSSPAPQPSSPA----PQPS---GSTPSPVPAPA-RTPT--------------PAPAP-A 164
G PAP P PA P P G+ P PVP P RTP P P P A
Sbjct: 155 GQRPAPTPGKPAAPQAPHPGMAPGARPGPVPKPGVRTPRVGNNPFSSAQPVDRPIPRPQA 214
Query: 165 PEPAT----TPTPAPASAPTPTPRSAPTPAPTRQPAT 197
P P P P AS PR R P T
Sbjct: 215 PRPGAPRPGAPRPGGASPGNMPPRPGGASGGPRPPRT 251
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 117 GQKLAINVSARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPA 176
G+ A G +P +P P P+P TP P + P P P P P P
Sbjct: 163 GKPAAPQAPHPGMAPGARPG-PVPKPGVRTPRVGNNPFSSAQPVDRPIPRP-QAPRPGAP 220
Query: 177 SAPTPTPRSA-PTPAPTRQPATHVVGGALGWTVPP 210
P P A P P R GGA G PP
Sbjct: 221 RPGAPRPGGASPGNMPPRP------GGASGGPRPP 249
>sp|A0PQC4|IF2_MYCUA Translation initiation factor IF-2 OS=Mycobacterium ulcerans
(strain Agy99) GN=infB PE=3 SV=1
Length = 945
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 34/97 (35%), Gaps = 27/97 (27%)
Query: 128 GSSPAPQPSSPA----PQPS---GSTPSPVPAPA-RTPT--------------PAPAP-A 164
G PAP P PA P P G+ P PVP RTP P P P A
Sbjct: 153 GQRPAPTPGKPAAPQAPHPGMAPGARPGPVPKQGVRTPRVGNNPFSSAQPVDRPIPRPQA 212
Query: 165 PEPAT----TPTPAPASAPTPTPRSAPTPAPTRQPAT 197
P P P P AS+ PR R P T
Sbjct: 213 PRPGAPRPGAPRPGGASSGNMPPRPGGASGGPRPPRT 249
>sp|B2RUR4|KPRP_MOUSE Keratinocyte proline-rich protein OS=Mus musculus GN=Kprp PE=1 SV=1
Length = 657
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 147 PSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAPTPAPTRQ 194
P P P P P P P P P P ++P P P+P S P P P RQ
Sbjct: 538 PGPRPQPCPLPHPEPMPRPAPCSSPEPCGQPVRCPSPCSGPNPVPYRQ 585
>sp|A6W7Z2|IF2_KINRD Translation initiation factor IF-2 OS=Kineococcus radiotolerans
(strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=infB
PE=3 SV=1
Length = 1044
Score = 33.1 bits (74), Expect = 1.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 132 APQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTP 181
AP+P + AP+P + +P R+ P AP P P + P P
Sbjct: 255 APRPGAGAPRPGNNPFAPSQGMPRSQGDRPGGAPRPGNNPFASNQGMPRP 304
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 69 VTRVTQSSFNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLAINVSAR 127
V V ++ + CNT N V LT SG +FI HC G KL + V +
Sbjct: 9 VHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKLMVVVMSN 68
Query: 128 GSSPA 132
+
Sbjct: 69 NTKKK 73
>sp|B1ZDQ8|IF2_METPB Translation initiation factor IF-2 OS=Methylobacterium populi
(strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=infB PE=3
SV=1
Length = 990
Score = 31.6 bits (70), Expect = 5.3, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 161 PAPAPEPATTPTPAPASAPTPT 182
PAPAPEP P+P A+ P T
Sbjct: 292 PAPAPEPEKAPSPTTAARPAGT 313
>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1
Length = 3567
Score = 31.2 bits (69), Expect = 6.9, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 125 SARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTPR 184
S+ + P SP P+P ++P P PA P + P T P AS + P+
Sbjct: 2337 SSGSGTSTPLIPSPKPEPEKTSPKP-EYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQ 2395
Query: 185 SA 186
++
Sbjct: 2396 AS 2397
>sp|Q9LJ64|PLRX1_ARATH Pollen-specific leucine-rich repeat extensin-like protein 1
OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=1
Length = 956
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 151 PAPARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAPTPAPTR 193
P TP P +P P+P TP P +P P P TP P
Sbjct: 538 PPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEE 580
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,415,138
Number of Sequences: 539616
Number of extensions: 5984172
Number of successful extensions: 189583
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2902
Number of HSP's successfully gapped in prelim test: 2850
Number of HSP's that attempted gapping in prelim test: 55455
Number of HSP's gapped (non-prelim): 56911
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)