Query 026789
Match_columns 233
No_of_seqs 328 out of 1441
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 22:13:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026789.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026789hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 1.4E-40 4.8E-45 268.5 5.0 112 21-133 2-115 (138)
2 1x9u_A Umecyanin; cupredoxin, 100.0 9.1E-38 3.1E-42 245.3 5.4 105 23-128 2-107 (116)
3 1ws8_A Mavicyanin; oxidized fo 100.0 1.2E-37 4.3E-42 242.1 4.6 105 22-128 2-106 (109)
4 2cbp_A Cucumber basic protein; 100.0 7.4E-36 2.5E-40 227.2 5.0 95 24-125 2-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 7.8E-32 2.7E-36 203.1 6.2 90 24-125 2-91 (91)
6 1qhq_A Protein (auracyanin); e 99.2 3.6E-11 1.2E-15 95.4 7.9 94 22-125 16-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.1 5.2E-11 1.8E-15 87.0 5.8 86 24-125 4-91 (91)
8 2cal_A Rusticyanin; iron respi 99.0 2.8E-10 9.7E-15 92.5 5.6 77 48-125 61-154 (154)
9 1pmy_A Pseudoazurin; electron 99.0 8.2E-10 2.8E-14 86.7 7.9 73 48-127 21-95 (123)
10 1paz_A Pseudoazurin precursor; 99.0 9.7E-10 3.3E-14 86.2 7.5 72 48-126 21-94 (123)
11 1plc_A Plastocyanin; electron 98.9 3E-09 1E-13 79.1 8.0 89 25-125 3-99 (99)
12 3ef4_A Pseudoazurin, blue copp 98.9 4.1E-09 1.4E-13 83.0 8.8 73 48-127 22-96 (124)
13 3erx_A Pseudoazurin; copper pr 98.9 2E-09 6.7E-14 84.6 6.8 72 48-126 21-94 (123)
14 2gim_A Plastocyanin; beta shee 98.9 5.2E-09 1.8E-13 78.5 8.8 91 23-125 4-105 (106)
15 2aan_A Auracyanin A; cupredoxi 98.9 9.6E-09 3.3E-13 81.3 10.5 93 22-125 18-139 (139)
16 3tu6_A Pseudoazurin (blue copp 98.9 4.7E-09 1.6E-13 82.9 8.5 74 48-128 23-98 (127)
17 1iuz_A Plastocyanin; electron 98.9 2.5E-09 8.5E-14 79.7 5.7 90 24-125 3-98 (98)
18 1b3i_A PETE protein, protein ( 98.9 9.5E-09 3.3E-13 76.0 8.4 89 24-125 4-97 (97)
19 1ws8_A Mavicyanin; oxidized fo 98.9 5.3E-10 1.8E-14 86.3 1.6 36 195-232 2-37 (109)
20 1byp_A Protein (plastocyanin); 98.8 1.2E-08 4.2E-13 75.7 7.6 89 25-125 3-99 (99)
21 1kdj_A Plastocyanin; electron 98.8 1.1E-08 3.7E-13 76.3 6.4 89 25-125 3-102 (102)
22 2plt_A Plastocyanin; electron 98.7 2.3E-08 8E-13 73.9 6.5 90 24-125 3-98 (98)
23 1pcs_A Plastocyanin; electron 98.7 3.9E-08 1.3E-12 72.7 7.1 90 24-125 4-98 (98)
24 2cbp_A Cucumber basic protein; 98.7 5.9E-09 2E-13 78.6 1.9 31 196-232 1-31 (96)
25 3c75_A Amicyanin; copper prote 98.3 8.9E-07 3E-11 69.8 6.6 67 48-125 60-132 (132)
26 2ux6_A Pseudoazurin; type-1 co 98.3 1.1E-06 3.9E-11 68.4 5.9 71 48-127 21-93 (122)
27 1cuo_A Protein (azurin ISO-2); 98.3 4.7E-06 1.6E-10 65.7 9.3 91 24-125 4-128 (129)
28 3cvb_A Plastocyanin; cupredoxi 98.2 2.4E-06 8E-11 63.5 7.0 88 24-125 4-104 (105)
29 3ay2_A Lipid modified azurin p 98.2 2.6E-06 8.9E-11 70.2 7.7 91 24-125 44-166 (167)
30 4hci_A Cupredoxin 1; structura 98.2 5.8E-07 2E-11 67.0 2.4 67 48-125 28-100 (100)
31 2ov0_A Amicyanin; beta-sandwic 98.1 6.6E-06 2.3E-10 61.8 6.0 67 48-125 33-105 (105)
32 1nwp_A Azurin; electron transp 98.0 1.6E-05 5.5E-10 62.5 8.4 91 24-125 4-128 (128)
33 2ccw_A Azurin II, AZN-2; elect 98.0 2.2E-05 7.6E-10 61.8 8.6 91 24-125 4-128 (129)
34 2iaa_C Azurin; quinoprotein, t 98.0 2.9E-05 9.9E-10 61.1 9.2 90 25-125 4-127 (128)
35 1id2_A Amicyanin; beta barrel, 98.0 1E-05 3.5E-10 61.1 5.7 67 48-125 34-106 (106)
36 1iko_P Ephrin-B2; greek KEY, g 97.5 3.4E-05 1.2E-09 64.1 2.0 81 50-130 24-144 (178)
37 1iby_A Nitrosocyanin; RED copp 96.8 0.0015 5.3E-08 48.9 5.1 67 48-125 38-111 (112)
38 2x11_B Ephrin-A5; receptor-sig 96.7 0.0011 3.7E-08 54.9 3.9 78 49-129 51-165 (177)
39 3fsa_A Azurin; copper, cupredo 96.6 0.021 7.2E-07 44.6 10.3 87 25-125 5-125 (125)
40 2cua_A Protein (CUA); CUA cent 96.6 0.0049 1.7E-07 48.5 6.6 67 48-125 60-134 (135)
41 3czu_B Ephrin-A1; ATP-binding, 96.4 0.0037 1.3E-07 51.9 4.9 76 49-127 49-161 (182)
42 1shx_A Ephrin-A5; ephrin signa 95.7 0.0088 3E-07 47.6 3.9 76 49-127 22-134 (138)
43 3d12_B Ephrin-B3; beta propell 95.6 0.0073 2.5E-07 48.2 3.1 76 50-125 22-140 (141)
44 2dv6_A Nitrite reductase; elec 94.9 0.015 5.1E-07 53.5 3.6 75 47-128 54-134 (447)
45 3s8f_B Cytochrome C oxidase su 94.9 0.06 2E-06 44.0 6.7 66 48-125 93-167 (168)
46 2vsm_B Ephrin-B2; developmenta 94.9 0.0061 2.1E-07 48.6 0.7 77 50-126 23-139 (140)
47 2wo3_B Ephrin-A2; transferase- 93.8 0.06 2E-06 43.6 4.3 36 49-84 31-77 (157)
48 3sbq_A Nitrous-oxide reductase 92.8 0.098 3.4E-06 50.7 4.9 67 48-126 558-637 (638)
49 1fwx_A Nitrous oxide reductase 92.6 0.1 3.6E-06 50.5 4.8 69 48-127 513-593 (595)
50 3hei_B Ephrin-A1; EPH receptor 89.5 0.25 8.5E-06 38.8 3.3 36 49-84 21-67 (132)
51 1oe1_A Dissimilatory copper-co 86.0 0.52 1.8E-05 41.5 3.6 77 48-127 65-153 (336)
52 1mzy_A Copper-containing nitri 85.8 0.53 1.8E-05 41.4 3.6 76 48-126 64-152 (333)
53 1kbv_A ANIA, major outer membr 81.5 1 3.5E-05 39.7 3.6 78 48-127 70-157 (327)
54 3ghp_A Cellulosomal scaffoldin 80.4 0.94 3.2E-05 38.2 2.7 11 49-59 18-28 (227)
55 2zoo_A Probable nitrite reduct 78.6 1 3.6E-05 41.0 2.7 79 47-127 59-147 (442)
56 2bw4_A Copper-containing nitri 77.5 1.7 5.6E-05 38.3 3.6 77 48-127 71-159 (340)
57 1v10_A Laccase; multicopper bl 76.3 1.8 6.3E-05 40.6 3.8 34 94-127 116-150 (521)
58 3gdc_A Multicopper oxidase; be 73.5 2.6 9E-05 36.3 3.8 80 48-127 66-155 (288)
59 3ghp_A Cellulosomal scaffoldin 72.6 2.6 8.8E-05 35.5 3.3 8 57-64 43-50 (227)
60 1x9u_A Umecyanin; cupredoxin, 69.8 1.2 4.2E-05 33.8 0.7 14 196-209 2-15 (116)
61 3iuw_A Activating signal coint 68.1 3.4 0.00012 29.8 2.7 16 50-65 36-52 (83)
62 1fft_B Ubiquinol oxidase; elec 67.4 18 0.00063 32.0 7.9 85 23-125 128-225 (315)
63 3kw8_A Laccase, putative coppe 64.3 4.3 0.00015 34.7 3.1 81 48-128 168-267 (276)
64 1aoz_A Ascorbate oxidase; oxid 64.3 7 0.00024 36.8 4.8 80 48-128 34-125 (552)
65 2zwn_A Two-domain type laccase 62.9 4.6 0.00016 35.6 3.1 78 48-126 35-126 (339)
66 3hb3_B Cytochrome C oxidase su 62.0 25 0.00087 30.8 7.7 66 49-126 190-264 (298)
67 1zpu_A Iron transport multicop 61.5 8.2 0.00028 36.3 4.8 79 48-128 34-126 (534)
68 2q9o_A Laccase-1; multicopper 60.2 5.9 0.0002 37.5 3.5 78 48-127 67-158 (559)
69 3sqr_A Laccase; multicopper ox 58.0 8.1 0.00028 37.0 4.1 34 94-127 155-188 (580)
70 2gsm_B Cytochrome C oxidase su 57.9 13 0.00046 31.9 5.1 66 49-126 172-246 (262)
71 2dv6_A Nitrite reductase; elec 56.2 9.4 0.00032 34.5 4.1 76 49-126 196-281 (447)
72 1sdd_A Coagulation factor V; c 55.6 3 0.0001 36.3 0.6 78 49-127 216-301 (306)
73 3t6v_A Laccase; beta barrel, o 55.6 9.8 0.00033 35.5 4.1 34 94-127 96-130 (495)
74 3pxl_A Laccase; 4-copper prote 55.0 10 0.00035 35.5 4.2 34 94-127 95-129 (499)
75 3g5w_A Multicopper oxidase typ 51.0 7.7 0.00026 33.9 2.5 79 48-127 34-126 (318)
76 1oe1_A Dissimilatory copper-co 50.4 11 0.00036 32.9 3.3 35 94-128 285-320 (336)
77 2uxt_A Protein SUFI, SUFI; oxi 49.9 5.9 0.0002 36.4 1.6 76 48-127 50-139 (451)
78 1mzy_A Copper-containing nitri 46.7 7.6 0.00026 33.9 1.8 35 94-128 285-320 (333)
79 2j5w_A Ceruloplasmin, ferroxid 46.6 6.3 0.00022 40.4 1.3 75 49-127 633-718 (1065)
80 1cyx_A CYOA; electron transpor 45.8 11 0.00039 31.4 2.6 85 23-125 18-115 (205)
81 3cg8_A Laccase; oxidoreductase 45.7 15 0.00051 32.4 3.5 78 49-128 210-308 (343)
82 3l6w_A Hemocyanin 1; cupredoxi 43.7 17 0.00057 34.3 3.6 73 49-124 412-490 (491)
83 3gdc_A Multicopper oxidase; be 42.6 6.8 0.00023 33.6 0.8 77 48-125 195-287 (288)
84 3g5w_A Multicopper oxidase typ 41.4 25 0.00086 30.6 4.3 33 95-127 239-277 (318)
85 2r7e_B Coagulation factor VIII 40.7 9 0.00031 37.9 1.4 77 49-126 369-456 (770)
86 2h8h_A Proto-oncogene tyrosine 40.4 12 0.0004 34.7 2.1 9 223-231 102-110 (535)
87 1v54_B Cytochrome C oxidase po 40.3 15 0.00052 30.9 2.6 30 95-126 183-215 (227)
88 1yel_A AT1G16640; CESG, protei 39.1 12 0.0004 27.2 1.5 18 48-65 74-91 (104)
89 1hfu_A Laccase 1; oxidoreducta 38.1 26 0.0009 32.4 4.1 79 47-127 33-129 (503)
90 3kw8_A Laccase, putative coppe 35.9 24 0.00081 30.0 3.1 78 49-127 37-141 (276)
91 2xu9_A Laccase; oxidoreductase 34.9 39 0.0013 30.6 4.6 75 50-124 49-133 (439)
92 3tas_A Small laccase, multi-co 33.9 38 0.0013 29.2 4.2 79 50-129 44-149 (313)
93 4i1k_A B3 domain-containing tr 33.2 17 0.0006 28.3 1.7 25 48-72 113-137 (146)
94 1whl_A Cylindromatosis tumor s 30.9 66 0.0023 23.2 4.4 15 50-64 6-20 (95)
95 3t9w_A Small laccase, multi-co 30.2 66 0.0022 27.6 5.1 80 50-130 60-166 (299)
96 3nb3_A Outer membrane protein 30.0 8.3 0.00028 33.3 -0.8 35 1-35 1-38 (346)
97 2r7e_A Coagulation factor VIII 29.3 60 0.0021 31.8 5.2 79 49-128 245-331 (742)
98 1sdd_A Coagulation factor V; c 29.2 69 0.0024 27.4 5.1 26 102-127 140-167 (306)
99 2r7e_A Coagulation factor VIII 28.7 32 0.0011 33.8 3.0 77 50-127 628-712 (742)
100 1kbv_A ANIA, major outer membr 28.5 24 0.00083 30.7 2.0 34 95-128 275-309 (327)
101 2a3m_A COG3005: nitrate/TMAO r 26.5 14 0.00047 28.2 -0.0 8 1-8 1-8 (130)
102 2k75_A Uncharacterized protein 26.5 29 0.00098 25.4 1.8 29 24-61 41-69 (106)
103 2vb2_X Copper protein, cation 26.5 37 0.0013 24.1 2.4 19 46-64 56-74 (88)
104 1xne_A Hypothetical protein PF 25.3 16 0.00055 27.5 0.2 13 50-62 33-45 (113)
105 2z0b_A GDE5, KIAA1434, putativ 25.2 42 0.0015 25.4 2.6 44 21-64 22-75 (131)
106 3aw5_A Multicopper oxidase; be 24.6 16 0.00054 33.5 0.0 75 48-128 38-128 (448)
107 2z0t_A Putative uncharacterize 24.6 24 0.00081 26.4 1.0 11 50-60 32-42 (109)
108 2r7e_B Coagulation factor VIII 24.6 22 0.00077 35.1 1.1 29 100-128 269-299 (770)
109 1w0n_A Endo-1,4-beta-xylanase 24.2 93 0.0032 23.9 4.3 63 53-128 41-117 (131)
110 4he6_A Peptidase family U32; u 23.3 27 0.00092 24.5 1.1 14 219-232 24-37 (89)
111 3zx1_A Oxidoreductase, putativ 23.0 35 0.0012 31.7 2.1 79 50-131 84-176 (481)
112 2l8d_A Lamin-B receptor; DNA b 23.0 58 0.002 22.3 2.6 23 49-72 7-29 (66)
113 2qcp_X Cation efflux system pr 22.9 42 0.0014 23.4 2.0 16 49-64 51-66 (80)
114 1ixd_A Cylindromatosis tumour- 22.7 89 0.003 23.1 3.9 24 48-71 14-37 (104)
115 4dny_A Metalloprotease STCE; m 22.4 35 0.0012 26.3 1.6 20 54-73 77-96 (126)
116 2hzs_I RNA polymerase II media 22.3 1.1 3.8E-05 24.8 -4.9 19 49-67 4-22 (27)
117 2kbn_A Conserved protein; nucl 21.4 50 0.0017 24.1 2.3 32 24-62 38-71 (109)
118 1ac0_A Glucoamylase; hydrolase 21.2 30 0.001 25.1 0.9 43 21-63 20-72 (108)
119 2l55_A SILB,silver efflux prot 21.0 37 0.0013 23.9 1.4 25 48-72 44-71 (82)
120 3abg_A Bilirubin oxidase; clea 20.7 1.3E+02 0.0044 28.1 5.5 83 50-136 71-167 (534)
121 1sdd_B Coagulation factor V; c 20.7 71 0.0024 30.4 3.7 80 50-129 71-178 (647)
122 2zoo_A Probable nitrite reduct 20.6 44 0.0015 30.1 2.1 34 95-128 265-299 (442)
123 2laa_A Beta/alpha-amylase; SBD 20.1 54 0.0018 24.2 2.2 35 31-65 27-65 (104)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.4e-40 Score=268.45 Aligned_cols=112 Identities=43% Similarity=0.790 Sum_probs=100.4
Q ss_pred cceEEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEEecCCCceEEEE-cCCCCCcCCCCCCCCcCCCCCceEEe-
Q 026789 21 AQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRV-TQSSFNACNTTSPLSRTTNSPASVTL- 98 (233)
Q Consensus 21 a~~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~H~V~~V-~~~~y~~C~~~~~~~~~~~G~~~v~l- 98 (233)
++++|+|||+.||++.++ ..+|++||++++|+|||+|+|+|..++|+|+|| ++++|+.|+.++++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 356899999999999643 478999999999999999999999999999999 99999999999999999999999999
Q ss_pred ccCCCeeEecCCCCCCCCCCeeeEEecCCCCCCCC
Q 026789 99 TASGPHYFICSFPGHCLGGQKLAINVSARGSSPAP 133 (233)
Q Consensus 99 ~~~G~~yFic~~~~hC~~Gmk~~I~V~~~~a~P~P 133 (233)
++.|.+||||++++||++||||+|+|....+.+++
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC-----
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCC
Confidence 99999999999999999999999999876554333
No 2
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=9.1e-38 Score=245.33 Aligned_cols=105 Identities=44% Similarity=0.858 Sum_probs=96.7
Q ss_pred eEEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccCC
Q 026789 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG 102 (233)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 102 (233)
++|+|||+.||+++. ...+|+.||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~-~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS-DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCS-STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCC-CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 468999999999863 3578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEecCCCCCCCCCCeeeE-EecCCC
Q 026789 103 PHYFICSFPGHCLGGQKLAI-NVSARG 128 (233)
Q Consensus 103 ~~yFic~~~~hC~~Gmk~~I-~V~~~~ 128 (233)
.+||||++++||++||||+| +|..+.
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred CEEEECCCCCccccCCEEEEEEECCCC
Confidence 99999999999999999999 776543
No 3
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1.2e-37 Score=242.09 Aligned_cols=105 Identities=41% Similarity=0.829 Sum_probs=97.4
Q ss_pred ceEEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccC
Q 026789 22 QTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTAS 101 (233)
Q Consensus 22 ~~~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~ 101 (233)
+++|+|||+.||++++ ..+|++||++++|+|||+|+|+|.++.|+|+||++++|+.|+.++++..+++|+++|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 4579999999999853 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecCCCCCCCCCCeeeEEecCCC
Q 026789 102 GPHYFICSFPGHCLGGQKLAINVSARG 128 (233)
Q Consensus 102 G~~yFic~~~~hC~~Gmk~~I~V~~~~ 128 (233)
|.+||||++++||++||||+|+|....
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC--
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCC
Confidence 999999999999999999999997654
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=7.4e-36 Score=227.20 Aligned_cols=95 Identities=38% Similarity=0.777 Sum_probs=91.1
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccCCC
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGP 103 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 103 (233)
+|+|||+.||++ +|++||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+| ++|+
T Consensus 2 ~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~ 74 (96)
T 2cbp_A 2 VYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQ 74 (96)
T ss_dssp EEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEE
T ss_pred EEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCC
Confidence 689999999997 599999999999999999999999999999999999999999999889999999999 8999
Q ss_pred eeEecCCCCCCCCCCeeeEEec
Q 026789 104 HYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 104 ~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+||||++++||++||||+|+|.
T Consensus 75 ~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 75 SYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999984
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=7.8e-32 Score=203.13 Aligned_cols=90 Identities=38% Similarity=0.762 Sum_probs=84.7
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccCCC
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGP 103 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 103 (233)
+|+| ||+++ ++||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+|+ +|+
T Consensus 2 ~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~ 69 (91)
T 1f56_A 2 VYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQ 69 (91)
T ss_dssp EEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEE
T ss_pred EEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCC
Confidence 5778 89972 89999999999999999999999999999999999999999999899999999996 899
Q ss_pred eeEecCCCCCCCCCCeeeEEec
Q 026789 104 HYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 104 ~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+||||++++||++||||+|+|.
T Consensus 70 ~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 70 NYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.20 E-value=3.6e-11 Score=95.42 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=63.6
Q ss_pred ceEEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-----CCceEEEEcCC-CCCcC--------------
Q 026789 22 QTRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-----GNHDVTRVTQS-SFNAC-------------- 80 (233)
Q Consensus 22 ~~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-----~~H~V~~V~~~-~y~~C-------------- 80 (233)
..++.|+-. ++|.+.+ +.++++.||+|.|.|.+ ..|+++..... ++..+
T Consensus 16 ~~~v~V~~~~~~~~F~P----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 1qhq_A 16 AQTVEVRAAPDALAFAQ----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFV 85 (140)
T ss_dssp SEEEEEEBCSSSSSBSC----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTC
T ss_pred CEEEEEEEeCCCceEeC----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccccccc
Confidence 345667654 3577743 57899999999998876 46999887422 11110
Q ss_pred ---CCCC------CCCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 81 ---NTTS------PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 81 ---~~~~------~~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+..+ .+....++...|+++++|.|||+|++.+||+.|||+.|.|.
T Consensus 86 ~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 86 PPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 0000 01111223356777899999999999999999999999985
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.14 E-value=5.2e-11 Score=86.96 Aligned_cols=86 Identities=19% Similarity=0.211 Sum_probs=60.9
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccC
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTAS 101 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~ 101 (233)
++.+|++ .+|.+.+ +.+++++||+|.|.+.. ..|+|+......+. . ............++++++
T Consensus 4 ~v~~~~~~~~~~f~P----------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~---~~~~~~~g~~~~~~f~~~ 69 (91)
T 1bxv_A 4 AIKMGADNGMLAFEP----------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-H---KDLAFSPGETFEATFSEP 69 (91)
T ss_dssp EEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC-E---EEEECSTTCEEEEECCSC
T ss_pred EEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC-c---ccceeCCCCEEEEEeCCC
Confidence 4556754 4566643 46899999999999874 57999975432221 0 001112233578899999
Q ss_pred CCeeEecCCCCCCCCCCeeeEEec
Q 026789 102 GPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 102 G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
|.|+|+|. .||..||+..|.|.
T Consensus 70 G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 70 GTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEEeC--CCccCCCEEEEEEC
Confidence 99999999 89999999999883
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.01 E-value=2.8e-10 Score=92.50 Aligned_cols=77 Identities=17% Similarity=0.320 Sum_probs=58.1
Q ss_pred cCeeeeeCCEEEEEecCC----CceEEEEc-CCCCCcCCCCCCCC-------cCCCC---Cc--eEEeccCCCeeEecCC
Q 026789 48 ANQTFTVGDTLVFNFAAG----NHDVTRVT-QSSFNACNTTSPLS-------RTTNS---PA--SVTLTASGPHYFICSF 110 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~----~H~V~~V~-~~~y~~C~~~~~~~-------~~~~G---~~--~v~l~~~G~~yFic~~ 110 (233)
..+++++||+|+|++.+. .|+++.++ ...|+.|.....+. ....| .. +|++ ++|.|||+|++
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCS
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCC
Confidence 357899999999999763 59999984 44777786543321 11222 33 4567 99999999999
Q ss_pred CCCCCCCCeeeEEec
Q 026789 111 PGHCLGGQKLAINVS 125 (233)
Q Consensus 111 ~~hC~~Gmk~~I~V~ 125 (233)
.+||+.||+..|.|.
T Consensus 140 ~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 140 PGMAATGMFGKIVVK 154 (154)
T ss_dssp TTTGGGTCEEEEEEC
T ss_pred CCHHHCCCEEEEEEC
Confidence 999999999999883
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=99.00 E-value=8.2e-10 Score=86.65 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=54.8
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCC--CCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+.+++++||+|.|.+....|+|+... .|...+. ..........++++++|.|+|+|+ .||..||+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 56899999999999987789998752 2222111 111122346899999999999999 59999999999997
Q ss_pred CC
Q 026789 126 AR 127 (233)
Q Consensus 126 ~~ 127 (233)
..
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 10
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.98 E-value=9.7e-10 Score=86.24 Aligned_cols=72 Identities=22% Similarity=0.253 Sum_probs=54.1
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCC--CCCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTS--PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~--~~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+.+++++||+|.|.+....|+|+... .|...+ ...........++++++|.|+|+|+ .||..||+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 57899999999999987789998741 222111 1111122246889999999999998 69999999999997
Q ss_pred C
Q 026789 126 A 126 (233)
Q Consensus 126 ~ 126 (233)
.
T Consensus 94 ~ 94 (123)
T 1paz_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 5
No 11
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.93 E-value=3e-09 Score=79.10 Aligned_cols=89 Identities=22% Similarity=0.333 Sum_probs=60.6
Q ss_pred EEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecCC-CceEEEEcCC---CCCcCCC---CCCCCcCCCCCceE
Q 026789 25 HVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNT---TSPLSRTTNSPASV 96 (233)
Q Consensus 25 ~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~-~H~V~~V~~~---~y~~C~~---~~~~~~~~~G~~~v 96 (233)
+.+|++ .++.+.+ +.+++++||+|.|.+... .|+|+..+.. +.+.+.. ...+.........+
T Consensus 3 v~m~~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~ 72 (99)
T 1plc_A 3 VLLGADDGSLAFVP----------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEV 72 (99)
T ss_dssp EEESCTTCCSCEES----------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEE
T ss_pred EEEecCCCcceEeC----------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEE
Confidence 456654 3455533 568999999999988764 7999876431 1222211 11111222335688
Q ss_pred EeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 97 TLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 97 ~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 73 ALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999999 89999999999883
No 12
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.92 E-value=4.1e-09 Score=83.02 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=56.2
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCC--CCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+.+++++||+|.|.+....|+|+..+. +...+. .....+....++++++|.|.|+|. .||..||+..|.|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 578999999999999888899998522 222211 111223357899999999999998 89999999999997
Q ss_pred CC
Q 026789 126 AR 127 (233)
Q Consensus 126 ~~ 127 (233)
.+
T Consensus 95 ~p 96 (124)
T 3ef4_A 95 KP 96 (124)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 13
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.91 E-value=2e-09 Score=84.61 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=55.6
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCC--CCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+.+++++||+|.|.+....|+|+..+. |...+. ..........++++++|.|+|+|. .||..||+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 578999999999999887899987422 222111 111123457899999999999999 89999999999998
Q ss_pred C
Q 026789 126 A 126 (233)
Q Consensus 126 ~ 126 (233)
.
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 6
No 14
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.91 E-value=5.2e-09 Score=78.52 Aligned_cols=91 Identities=23% Similarity=0.208 Sum_probs=61.2
Q ss_pred eEEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCCCC-----cCCC-CCCCCcCCCCCc
Q 026789 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFN-----ACNT-TSPLSRTTNSPA 94 (233)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~y~-----~C~~-~~~~~~~~~G~~ 94 (233)
.++.||.+ .++.+.+ +.+++++||+|.|.+.. ..|+|+..+....+ .+.. .+..........
T Consensus 4 ~~V~~~~~~~~~~F~P----------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~ 73 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEP----------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQST 73 (106)
T ss_dssp EEEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEE
T ss_pred EEEEEEecCCcceEcC----------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEE
Confidence 35667653 4576643 56899999999998765 46999864321110 0000 011122223357
Q ss_pred eEEe---ccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 95 SVTL---TASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 95 ~v~l---~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
.+++ +++|.|+|+|. .||+.||+..|.|.
T Consensus 74 ~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 74 STTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 8888 89999999999 89999999999985
No 15
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.90 E-value=9.6e-09 Score=81.25 Aligned_cols=93 Identities=18% Similarity=0.330 Sum_probs=62.7
Q ss_pred ceEEEecC-CCCCccCCCCCCCccccccCeeeeeCCEEEEEecCC----CceEEEEcCC------------------CCC
Q 026789 22 QTRHVVGD-ALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG----NHDVTRVTQS------------------SFN 78 (233)
Q Consensus 22 ~~~~~VGg-~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~----~H~V~~V~~~------------------~y~ 78 (233)
..++.||. ..++.+.+ +.++++.||+|.|.|.+. .|+++..... +|.
T Consensus 18 ~~~V~v~~~~~~~~F~p----------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~ 87 (139)
T 2aan_A 18 PVTIEIGSKGEELAFDK----------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYL 87 (139)
T ss_dssp CEEEEEEBCTTSSSBSC----------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTC
T ss_pred CEEEEEEecCCccEEcC----------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhccccccccc
Confidence 34566742 23566533 568899999999988653 6999887532 455
Q ss_pred cCCCCCCC---CcCCCC-CceEEe--ccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 79 ACNTTSPL---SRTTNS-PASVTL--TASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 79 ~C~~~~~~---~~~~~G-~~~v~l--~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
.|...+.+ .....| ...|++ +++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 88 p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 88 PADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 55422211 112333 345555 48999999999999999 999999883
No 16
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.89 E-value=4.7e-09 Score=82.88 Aligned_cols=74 Identities=23% Similarity=0.228 Sum_probs=56.3
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCC--CCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+..++++||+|.|.+....|+|+..+. +..... ..........++++++|.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 578999999999999877899987532 111111 111123357899999999999999 79999999999998
Q ss_pred CCC
Q 026789 126 ARG 128 (233)
Q Consensus 126 ~~~ 128 (233)
.+.
T Consensus 96 ~~~ 98 (127)
T 3tu6_A 96 EPA 98 (127)
T ss_dssp SCT
T ss_pred cCC
Confidence 643
No 17
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.87 E-value=2.5e-09 Score=79.69 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=60.4
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCC---CCCcCCCCCCCCcCCCC-CceEE
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQS---SFNACNTTSPLSRTTNS-PASVT 97 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~---~y~~C~~~~~~~~~~~G-~~~v~ 97 (233)
++.+|++ .++.+.+ +.+++++||+|.|.+.. ..|+|+..+.. .++.+..+........| ...++
T Consensus 3 ~V~m~~~~~~~~F~P----------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~t 72 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVP----------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRK 72 (98)
T ss_dssp EEEESCTTSCCSEES----------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEecCCCCcEEeC----------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEE
Confidence 3455543 4566644 57899999999998875 37999875321 22322111100112333 46889
Q ss_pred eccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 98 LTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 98 l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
++++|.|+|+|.. ||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 73 LSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred cCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999999995 9999999999883
No 18
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.85 E-value=9.5e-09 Score=75.96 Aligned_cols=89 Identities=26% Similarity=0.309 Sum_probs=60.9
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCC---CCcCCCCCCCCcCCCCCceEEe
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSS---FNACNTTSPLSRTTNSPASVTL 98 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~---y~~C~~~~~~~~~~~G~~~v~l 98 (233)
++.+|++ .++.+.+ +.+++++||+|.|.+.. ..|+|+..+... .+.+.. +...........+++
T Consensus 4 ~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~tf 72 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEP----------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSN-TKLAIAPGSFYSVTL 72 (97)
T ss_dssp EEEEEETTTEEEEES----------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCB-CCCCCSCSCCEEEEC
T ss_pred EEEEeccCCccEEeC----------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccc-cceecCCCCEEEEEe
Confidence 4556653 4455533 56899999999998765 369998764321 001111 112222334578899
Q ss_pred ccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 99 TASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 99 ~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+++|.|+|+|. .||+.||+..|.|.
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 99999999999 99999999999883
No 19
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=98.85 E-value=5.3e-10 Score=86.27 Aligned_cols=36 Identities=42% Similarity=0.771 Sum_probs=32.5
Q ss_pred CceeeecCCCCccCCCCCCcchhccccCCcccCCceec
Q 026789 195 PATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILG 232 (233)
Q Consensus 195 ~~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~F~vGD~L~ 232 (233)
+++|+|||+.||+++. ..+|++||++|+|+|||+|+
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~Lv 37 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLL 37 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEE
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEE
Confidence 6789999999999974 35799999999999999996
No 20
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.80 E-value=1.2e-08 Score=75.65 Aligned_cols=89 Identities=22% Similarity=0.343 Sum_probs=60.0
Q ss_pred EEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecCC-CceEEEEcCC---CCCcCCC---CCCCCcCCCCCceE
Q 026789 25 HVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNT---TSPLSRTTNSPASV 96 (233)
Q Consensus 25 ~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~-~H~V~~V~~~---~y~~C~~---~~~~~~~~~G~~~v 96 (233)
+.||++ .++.+.+ +.+++++||+|.|.+... .|+|+..+.. .++.+.. .+.+.........+
T Consensus 3 V~~~~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~ 72 (99)
T 1byp_A 3 VLLGSSDGGLAFVP----------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSV 72 (99)
T ss_dssp EEESCTTSCCSEES----------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEE
T ss_pred EEEecCCCcceEeC----------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEE
Confidence 456643 4455533 468899999999987754 6999875321 1222211 01111222335688
Q ss_pred EeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 97 TLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 97 ~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+++++|.|.|+|. .||+.||+..|.|.
T Consensus 73 ~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 73 TLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999999 89999999999883
No 21
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.77 E-value=1.1e-08 Score=76.33 Aligned_cols=89 Identities=17% Similarity=0.252 Sum_probs=60.1
Q ss_pred EEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCCCC----cCCCC-----CCCCcCCCCC
Q 026789 25 HVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFN----ACNTT-----SPLSRTTNSP 93 (233)
Q Consensus 25 ~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~y~----~C~~~-----~~~~~~~~G~ 93 (233)
+.||.+ .++.+.+ +.+++++||+|.|.+.. ..|+|+..+...++ .|... +.........
T Consensus 3 V~~g~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~ 72 (102)
T 1kdj_A 3 VEVGDEVGNFKFYP----------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPS 72 (102)
T ss_dssp EEESCTTCCCCEES----------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCE
T ss_pred EEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCE
Confidence 557764 3455533 56899999999998765 46999875333321 11110 1111222235
Q ss_pred ceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 94 ASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
..++++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 ~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 73 FKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 6788899999999999 99999999999883
No 22
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.71 E-value=2.3e-08 Score=73.86 Aligned_cols=90 Identities=24% Similarity=0.224 Sum_probs=60.0
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecCC-CceEEEEcCC---CCCcCCCCCCCCcCC-CCCceEE
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNTTSPLSRTT-NSPASVT 97 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~-~H~V~~V~~~---~y~~C~~~~~~~~~~-~G~~~v~ 97 (233)
++.+|++ .++.+.+ +..++++||+|.|.+... .|+|+..+.. +++.+.......... .....++
T Consensus 3 ~V~m~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 2plt_A 3 TVKLGADSGALEFVP----------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVK 72 (98)
T ss_dssp EEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEecCCCCceEeC----------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEE
Confidence 4556643 3466533 468899999999988754 6999875321 222211100001122 3346789
Q ss_pred eccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 98 LTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 98 l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 73 LTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred eCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999999 89999999999883
No 23
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=3.9e-08 Score=72.74 Aligned_cols=90 Identities=16% Similarity=0.194 Sum_probs=59.1
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCC--CCcCCCC-CCCCcCCCCCceEEe
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSS--FNACNTT-SPLSRTTNSPASVTL 98 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~--y~~C~~~-~~~~~~~~G~~~v~l 98 (233)
++.+|.+ .++.+.+ +.+++++||+|.|.+.. ..|+|+..+... .+..... +...........+++
T Consensus 4 ~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf 73 (98)
T 1pcs_A 4 TVKMGSDSGALVFEP----------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTF 73 (98)
T ss_dssp EEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEc
Confidence 4566654 4565533 46899999999998765 469998743210 0000000 001112233467889
Q ss_pred ccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 99 TASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 99 ~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+++|.|+|+|. .||..||+..|.|.
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 99999999999 89999999999883
No 24
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=98.66 E-value=5.9e-09 Score=78.58 Aligned_cols=31 Identities=45% Similarity=0.866 Sum_probs=28.5
Q ss_pred ceeeecCCCCccCCCCCCcchhccccCCcccCCceec
Q 026789 196 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILG 232 (233)
Q Consensus 196 ~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~F~vGD~L~ 232 (233)
++|+|||+.||+++ |++|+++++|+|||+|+
T Consensus 1 ~~~~VG~~~GW~~~------y~~Wa~~~~f~vGD~L~ 31 (96)
T 2cbp_A 1 AVYVVGGSGGWTFN------TESWPKGKRFRAGDILL 31 (96)
T ss_dssp CEEETTGGGCSCSS------CTTTTTTCCBCTTCEEE
T ss_pred CEEEECCcCCCccC------hhhhccCceEcCCCEEE
Confidence 46999999999984 99999999999999996
No 25
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.33 E-value=8.9e-07 Score=69.78 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=48.3
Q ss_pred cCeeeeeCCEEEEEecCC-CceEEEEcCCC----CCcCCCCCCCCcCCCC-CceEEeccCCCeeEecCCCCCCCCCCeee
Q 026789 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-~H~V~~V~~~~----y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~hC~~Gmk~~ 121 (233)
+..++++||+|.|..... .|+|+..+... |+. .....| ...++++++|.|.|+|+. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~s-------~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCcccccc-------cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 568999999999986654 69998753221 111 112223 467889999999999996 65 99999
Q ss_pred EEec
Q 026789 122 INVS 125 (233)
Q Consensus 122 I~V~ 125 (233)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 26
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.26 E-value=1.1e-06 Score=68.44 Aligned_cols=71 Identities=23% Similarity=0.250 Sum_probs=51.6
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEEcCCCCCcCCCCCC--CCcCCCCCceEEeccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
+.+++++||+|.|.+....|+|+..+. |..... ..........++++++|.|+|+|.. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 568999999999998776899987531 111111 1111223578899999999999996 777 99999997
Q ss_pred CC
Q 026789 126 AR 127 (233)
Q Consensus 126 ~~ 127 (233)
..
T Consensus 92 ~~ 93 (122)
T 2ux6_A 92 DA 93 (122)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 27
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.26 E-value=4.7e-06 Score=65.67 Aligned_cols=91 Identities=14% Similarity=0.247 Sum_probs=58.3
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeeeeeC-CEEEEEecC-C-------CceEEEEcCCC----------------CC
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTFTVG-DTLVFNFAA-G-------NHDVTRVTQSS----------------FN 78 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vG-D~L~F~y~~-~-------~H~V~~V~~~~----------------y~ 78 (233)
++.|+..+...+.+ +..+++.| |.+.|.+.+ + .|+++..+..+ |.
T Consensus 4 ~v~i~~~d~m~F~p----------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v 73 (129)
T 1cuo_A 4 ETTVTSGDTMTYST----------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFV 73 (129)
T ss_dssp EEEEEECSSSCCSC----------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTS
T ss_pred EEEEEeCCCceEcc----------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccc
Confidence 45566555666643 56899999 977777754 2 39998775432 21
Q ss_pred cCCCCCCC---CcCCCC-CceEEec-----cCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 79 ACNTTSPL---SRTTNS-PASVTLT-----ASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 79 ~C~~~~~~---~~~~~G-~~~v~l~-----~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
.=+..+-+ .....| ...++++ ++|.|+|+|++++|=+ ||+..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 74 TPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 10001111 112233 3556664 7899999999999999 899999985
No 28
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.25 E-value=2.4e-06 Score=63.47 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=57.8
Q ss_pred EEEecCC-CCCccCCCCCCCccccccCeeeeeCCEEEEEecC-CCceEEEEcCCCCCcCCC--------CCCCCcCCCCC
Q 026789 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFNACNT--------TSPLSRTTNSP 93 (233)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~-~~H~V~~V~~~~y~~C~~--------~~~~~~~~~G~ 93 (233)
++.||.+ .+..+.+ ...+++.||+|.|.... ..|+|..-... + .+.. .+...+.....
T Consensus 4 ~V~~~~~~~~~~f~p----------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~-~-~~~~g~~~~~~~~~~~~i~pG~~ 71 (105)
T 3cvb_A 4 TVKMGADSGLFQFEP----------ANVTVHPGDTVKWVNNKLPPHNILFDDKQ-V-PGASKELADKLSHSQLMFSPGES 71 (105)
T ss_dssp EEEESCTTCCSCEES----------SEEEECTTEEEEEEECSSCCEEEEECTTS-S-GGGCHHHHHHHCEEEEECSTTCE
T ss_pred EEEEeecCCccEEeC----------CEEEEcCCCEEEEEECCCCCCeEEEeCCC-C-CcccccccccccccccccCCCCe
Confidence 4567653 4566543 46889999999998664 46998874211 1 1100 00011122334
Q ss_pred ceEEe---ccCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 94 ASVTL---TASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 94 ~~v~l---~~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
..+++ +++|.|+|+|. .||..||+..|.|.
T Consensus 72 ~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 72 YEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 67778 78999999999 89999999999985
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.24 E-value=2.6e-06 Score=70.18 Aligned_cols=91 Identities=14% Similarity=0.216 Sum_probs=58.8
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeee-eeCCEEEEEecC--C------CceEEEEcCCCCC---------------c
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAA--G------NHDVTRVTQSSFN---------------A 79 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~L~F~y~~--~------~H~V~~V~~~~y~---------------~ 79 (233)
++.|+.++++.|.+ +.+++ +.||.|.|.|.+ . .|+++..+..+++ .
T Consensus 44 ~V~I~~~d~m~F~P----------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~ 113 (167)
T 3ay2_A 44 AATVESNDNMQFNT----------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVK 113 (167)
T ss_dssp EEEEEECTTSCBSC----------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSC
T ss_pred EEEEEeCCCceEec----------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccccc
Confidence 56677666776643 56788 889987766643 2 2999876543221 0
Q ss_pred CCCCCCC---CcCCCC-CceEEec----cCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 80 CNTTSPL---SRTTNS-PASVTLT----ASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 80 C~~~~~~---~~~~~G-~~~v~l~----~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
=+..+.+ .....| ...|+++ ++|.|+|+|++.+|-+ ||+..|.|.
T Consensus 114 ~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 114 PDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 0000000 112333 4567775 7899999999999998 999999985
No 30
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.18 E-value=5.8e-07 Score=67.01 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=46.5
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCCCCCCCCeee
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~hC~~Gmk~~ 121 (233)
+.+++++||+|.|.+.+. .|++..-.. ..+ .....| ...++.+++|.|.|+|. .||..||+..
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~-~~~--------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~ 96 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKL-GID--------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGK 96 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGG-TEE--------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecC-Ccc--------eeecCCcceeEEEecccCceEEEECc--cccCCCCEEE
Confidence 578999999999987542 377765211 111 111222 23456679999999997 7999999999
Q ss_pred EEec
Q 026789 122 INVS 125 (233)
Q Consensus 122 I~V~ 125 (233)
|.|.
T Consensus 97 i~Ve 100 (100)
T 4hci_A 97 VIVK 100 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 31
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.05 E-value=6.6e-06 Score=61.83 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=47.8
Q ss_pred cCeeeeeCCEEEEEecCC-CceEEEEcCCC----CCcCCCCCCCCcCCCC-CceEEeccCCCeeEecCCCCCCCCCCeee
Q 026789 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-~H~V~~V~~~~----y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~hC~~Gmk~~ 121 (233)
..+++++||+|.|..... .|+|...+..+ |+.+ ....| ...++++++|.|+|+|.. |. ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 568999999999987654 69998643211 2211 12223 467888999999999997 44 99999
Q ss_pred EEec
Q 026789 122 INVS 125 (233)
Q Consensus 122 I~V~ 125 (233)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9873
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.04 E-value=1.6e-05 Score=62.55 Aligned_cols=91 Identities=18% Similarity=0.257 Sum_probs=57.4
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeee-eeCCEEEEEecCC--------CceEEEEcCCCCC----------------
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSSFN---------------- 78 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~L~F~y~~~--------~H~V~~V~~~~y~---------------- 78 (233)
++.|+.++++.+.+ +.+++ +.||+|.|.+.+. .|+++..+.++.+
T Consensus 4 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~ 73 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT----------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYL 73 (128)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTS
T ss_pred EEEEEeCCCccEec----------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccc
Confidence 45566666677744 46788 8899877777542 2999876433211
Q ss_pred cCCCCCCC---CcCCCC-CceEEec----cCCC-eeEecCCCCCCCCCCeeeEEec
Q 026789 79 ACNTTSPL---SRTTNS-PASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 79 ~C~~~~~~---~~~~~G-~~~v~l~----~~G~-~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
.=+..+-+ .....| ...++++ ++|. |.|+|++++|=+ ||+..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 74 KDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 00000000 112333 4567765 4676 999999999999 999999873
No 33
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.01 E-value=2.2e-05 Score=61.78 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=55.9
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeee-eeCCEEEEEecCC--------CceEEEEcCCC----------------CC
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSS----------------FN 78 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~L~F~y~~~--------~H~V~~V~~~~----------------y~ 78 (233)
++.|+.+++..+.+ +..++ +.||.|.|.+.+. .|+++..+.++ |.
T Consensus 4 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~ 73 (129)
T 2ccw_A 4 EATVESNDAMQYNV----------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYV 73 (129)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCccEec----------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccc
Confidence 45566565666633 45666 7799777776542 39998765432 21
Q ss_pred cCCCCCCC---CcCCCC-CceEEec----cCCC-eeEecCCCCCCCCCCeeeEEec
Q 026789 79 ACNTTSPL---SRTTNS-PASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 79 ~C~~~~~~---~~~~~G-~~~v~l~----~~G~-~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
.=+..+-+ .....| ...|+++ ++|. |+|+|++++|=+ ||+..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 74 KAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 10001101 112333 4567665 4665 999999999998 999999985
No 34
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.01 E-value=2.9e-05 Score=61.07 Aligned_cols=90 Identities=20% Similarity=0.263 Sum_probs=56.3
Q ss_pred EEecCCCCCccCCCCCCCccccccCeee-eeCCEEEEEecCC--------CceEEEEcCCC----------------CCc
Q 026789 25 HVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSS----------------FNA 79 (233)
Q Consensus 25 ~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~L~F~y~~~--------~H~V~~V~~~~----------------y~~ 79 (233)
+.|+..+++.+.+ +.+++ +.||+|.|.|.+. .|+++..+.++ |..
T Consensus 4 v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~ 73 (128)
T 2iaa_C 4 VSIEGNDSMQFNT----------KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVK 73 (128)
T ss_dssp EEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEeCCCceEec----------CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccc
Confidence 4565556677643 45677 7799777777543 39998764332 211
Q ss_pred CCCCCCC---CcCCCC-CceEEec----cCCC-eeEecCCCCCCCCCCeeeEEec
Q 026789 80 CNTTSPL---SRTTNS-PASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 80 C~~~~~~---~~~~~G-~~~v~l~----~~G~-~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
=+..+-+ .....| ...++++ ++|. |.|+|++++|=+ ||+..|.|.
T Consensus 74 ~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 74 AGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 0000101 112333 4567775 5785 999999999999 999999985
No 35
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.97 E-value=1e-05 Score=61.06 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=48.3
Q ss_pred cCeeeeeCCEEEEEecCC-CceEEEEcCCC----CCcCCCCCCCCcCCCC-CceEEeccCCCeeEecCCCCCCCCCCeee
Q 026789 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-~H~V~~V~~~~----y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~hC~~Gmk~~ 121 (233)
+..++++||+|.|..... .|+|+..+... |+. .....| ...++++++|.|.|+|.. |+ ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 568999999999986644 69998643220 111 112223 467889999999999997 76 99999
Q ss_pred EEec
Q 026789 122 INVS 125 (233)
Q Consensus 122 I~V~ 125 (233)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 36
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.48 E-value=3.4e-05 Score=64.05 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=52.9
Q ss_pred eeeeeCCEEEE---EecC------CCceEEEEcCCCCCcCCCCC-CCCcC--C--CCCceEEec-------------cCC
Q 026789 50 QTFTVGDTLVF---NFAA------GNHDVTRVTQSSFNACNTTS-PLSRT--T--NSPASVTLT-------------ASG 102 (233)
Q Consensus 50 ~~f~vGD~L~F---~y~~------~~H~V~~V~~~~y~~C~~~~-~~~~~--~--~G~~~v~l~-------------~~G 102 (233)
..+++||.|-| +|.. ..+.|++|++.+|+.|+... ..... + .+...|++. +.|
T Consensus 24 v~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg 103 (178)
T 1iko_P 24 LYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKN 103 (178)
T ss_dssp ECCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCC
Confidence 34567999988 5543 24889999999999998763 22111 1 222233331 245
Q ss_pred -CeeEecCCC-----------CCCCC-CCeeeEEecCCCCC
Q 026789 103 -PHYFICSFP-----------GHCLG-GQKLAINVSARGSS 130 (233)
Q Consensus 103 -~~yFic~~~-----------~hC~~-Gmk~~I~V~~~~a~ 130 (233)
.|||||+-. ++|.. +|||.|.|......
T Consensus 104 ~~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 104 KDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp EEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred CceEEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 789999864 78976 89999999766544
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.81 E-value=0.0015 Score=48.92 Aligned_cols=67 Identities=10% Similarity=0.139 Sum_probs=44.5
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEEEcCCCCCcCCCCCCCCcCCCC-CceEEe--ccCCCeeEecCCCCCCCC-CCee
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNS-PASVTL--TASGPHYFICSFPGHCLG-GQKL 120 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G-~~~v~l--~~~G~~yFic~~~~hC~~-Gmk~ 120 (233)
+..+++.||.|.|.+.+. .|++..-+. .. ......| ...+++ +++|.|+|.|.. ||.. +|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---~~------~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSIDAF---GV------QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEEGGG---TE------EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEEcCC---Cc------eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 467899999999977542 588764221 10 1112223 345555 899999999995 7754 3999
Q ss_pred eEEec
Q 026789 121 AINVS 125 (233)
Q Consensus 121 ~I~V~ 125 (233)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99885
No 38
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.73 E-value=0.0011 Score=54.90 Aligned_cols=78 Identities=23% Similarity=0.306 Sum_probs=49.1
Q ss_pred CeeeeeCCEEEE---EecC-------CCceEEEEcCCCCCcCCCCCCCC-cC-------CCCCceEEe------------
Q 026789 49 NQTFTVGDTLVF---NFAA-------GNHDVTRVTQSSFNACNTTSPLS-RT-------TNSPASVTL------------ 98 (233)
Q Consensus 49 ~~~f~vGD~L~F---~y~~-------~~H~V~~V~~~~y~~C~~~~~~~-~~-------~~G~~~v~l------------ 98 (233)
.+.+++||.|-+ +|.. ....+++|++++|++|+...... .. ..+..+|++
T Consensus 51 ~i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~ 130 (177)
T 2x11_B 51 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 130 (177)
T ss_dssp EEEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCc
Confidence 367899999977 5652 35677899999999998754321 11 112323322
Q ss_pred -ccCC-CeeEecCCC-----CCCCCCCeeeEEecCCCC
Q 026789 99 -TASG-PHYFICSFP-----GHCLGGQKLAINVSARGS 129 (233)
Q Consensus 99 -~~~G-~~yFic~~~-----~hC~~Gmk~~I~V~~~~a 129 (233)
=++| .||||++-. +-| |||.|.|.....
T Consensus 131 EF~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 131 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred cccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 0345 578887632 345 999999976543
No 39
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.59 E-value=0.021 Score=44.63 Aligned_cols=87 Identities=13% Similarity=0.144 Sum_probs=51.6
Q ss_pred EEecCCCCCccCCCCCCCccccccCeeeee-CCEEEEEecCC--------CceEEEEcCC----------------CCCc
Q 026789 25 HVVGDALGWIVPPNGPATYSNWAANQTFTV-GDTLVFNFAAG--------NHDVTRVTQS----------------SFNA 79 (233)
Q Consensus 25 ~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~v-GD~L~F~y~~~--------~H~V~~V~~~----------------~y~~ 79 (233)
+.|-.++...+.+ +.+++.. |++|.|.+.+. .|+++....+ +|-.
T Consensus 5 v~i~~~d~M~F~p----------~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~ 74 (125)
T 3fsa_A 5 VDIQGNDQMQFNT----------NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLK 74 (125)
T ss_dssp EEEEBCTTSCBSC----------SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEccCCcEEec----------CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCC
Confidence 4455555566633 4566754 99998888653 3999986322 1211
Q ss_pred CCCCCCC---CcCCCC-CceEEec-----cCCCeeEecCCCCCCCCCCeeeEEec
Q 026789 80 CNTTSPL---SRTTNS-PASVTLT-----ASGPHYFICSFPGHCLGGQKLAINVS 125 (233)
Q Consensus 80 C~~~~~~---~~~~~G-~~~v~l~-----~~G~~yFic~~~~hC~~Gmk~~I~V~ 125 (233)
=+..+-+ .....| .+.++++ +.|.|-|+|+ +|= ||+..|.|.
T Consensus 75 ~~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 75 PDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TTCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 0001111 112333 3567776 4599999999 887 999999873
No 40
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.57 E-value=0.0049 Score=48.54 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=46.0
Q ss_pred cCeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCCCCC---CCCe
Q 026789 48 ANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHCL---GGQK 119 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~hC~---~Gmk 119 (233)
+..++.+||.|.|...+. .|++..-+ +.. ......| ...++++++|.|+|+|+. +|. .+|+
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~ip~---~~~------k~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~ 128 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHVEG---TNI------NVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 128 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEETT---SSC------EEEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEecC---CCc------eeEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCE
Confidence 468999999999998653 47766411 110 0011223 356888999999999985 454 6899
Q ss_pred eeEEec
Q 026789 120 LAINVS 125 (233)
Q Consensus 120 ~~I~V~ 125 (233)
+.|.|.
T Consensus 129 g~v~V~ 134 (135)
T 2cua_A 129 GTIVVK 134 (135)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999885
No 41
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.37 E-value=0.0037 Score=51.92 Aligned_cols=76 Identities=16% Similarity=0.319 Sum_probs=47.4
Q ss_pred CeeeeeCCEEEE---EecC--------CCceEEEEcCCCCCcCCCCC-CCCcC------C-CCCce--------------
Q 026789 49 NQTFTVGDTLVF---NFAA--------GNHDVTRVTQSSFNACNTTS-PLSRT------T-NSPAS-------------- 95 (233)
Q Consensus 49 ~~~f~vGD~L~F---~y~~--------~~H~V~~V~~~~y~~C~~~~-~~~~~------~-~G~~~-------------- 95 (233)
.+.+++||.|-+ +|.. ....+++|++.+|++|+... ....+ . .|..+
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 467899999977 5543 23678899999999998653 11111 1 12222
Q ss_pred EEeccCCCeeEecCC----CCCCCCCCeeeEEecCC
Q 026789 96 VTLTASGPHYFICSF----PGHCLGGQKLAINVSAR 127 (233)
Q Consensus 96 v~l~~~G~~yFic~~----~~hC~~Gmk~~I~V~~~ 127 (233)
+++..--.||||++- ++.| ||+.|.|...
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k 161 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGK 161 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC-
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecC
Confidence 233322357888863 4555 8999999744
No 42
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=95.65 E-value=0.0088 Score=47.58 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=48.0
Q ss_pred CeeeeeCCEEEE---EecC-------CCceEEEEcCCCCCcCCCCCCCC-cC-------CCCCceEEec-----------
Q 026789 49 NQTFTVGDTLVF---NFAA-------GNHDVTRVTQSSFNACNTTSPLS-RT-------TNSPASVTLT----------- 99 (233)
Q Consensus 49 ~~~f~vGD~L~F---~y~~-------~~H~V~~V~~~~y~~C~~~~~~~-~~-------~~G~~~v~l~----------- 99 (233)
.+.+++||.|-+ +|.. ....+++|++.+|++|+...... .. ..+..+|++.
T Consensus 22 ~i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~ 101 (138)
T 1shx_A 22 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 101 (138)
T ss_dssp EEEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCce
Confidence 467889999977 5542 25677899999999998654221 11 0133233220
Q ss_pred --cCC-CeeEecCC-----CCCCCCCCeeeEEecCC
Q 026789 100 --ASG-PHYFICSF-----PGHCLGGQKLAINVSAR 127 (233)
Q Consensus 100 --~~G-~~yFic~~-----~~hC~~Gmk~~I~V~~~ 127 (233)
++| .||||++- ++.| |||.|.|...
T Consensus 102 EF~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~ 134 (138)
T 1shx_A 102 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPT 134 (138)
T ss_dssp CCCTTEEEEEEEEESSCCSCSCC---CEEEEEECCT
T ss_pred eecCCCeEEEEEcCCCCCCCCce---eEEEEEEEcc
Confidence 245 57888753 2346 9999999754
No 43
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.56 E-value=0.0073 Score=48.21 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=49.7
Q ss_pred eeeeeCCEEEE---EecC---------CCceEEEEcCCCCCcCCCCC-CCCcC----CCCC--------------ceEEe
Q 026789 50 QTFTVGDTLVF---NFAA---------GNHDVTRVTQSSFNACNTTS-PLSRT----TNSP--------------ASVTL 98 (233)
Q Consensus 50 ~~f~vGD~L~F---~y~~---------~~H~V~~V~~~~y~~C~~~~-~~~~~----~~G~--------------~~v~l 98 (233)
..+++||.|-+ +|.. ....++.|++.+|++|+... ..... ..+. ..+.+
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 56789999977 4543 34678899999999998752 21111 1122 22334
Q ss_pred ccCCCeeEecCC-----------CCCCCC-CCeeeEEec
Q 026789 99 TASGPHYFICSF-----------PGHCLG-GQKLAINVS 125 (233)
Q Consensus 99 ~~~G~~yFic~~-----------~~hC~~-Gmk~~I~V~ 125 (233)
..--.||||++- +|-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 333468888874 356865 899999985
No 44
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=94.93 E-value=0.015 Score=53.45 Aligned_cols=75 Identities=23% Similarity=0.312 Sum_probs=51.3
Q ss_pred ccCeeeeeCCEEEEEecCC---CceEEEEcCCCCCcCCCCCCCCcCCCC-C--ceEEeccCCCeeEecCCCCCCCCCCee
Q 026789 47 AANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNS-P--ASVTLTASGPHYFICSFPGHCLGGQKL 120 (233)
Q Consensus 47 a~~~~f~vGD~L~F~y~~~---~H~V~~V~~~~y~~C~~~~~~~~~~~G-~--~~v~l~~~G~~yFic~~~~hC~~Gmk~ 120 (233)
...++++.||+|+|++.+. .|++..-.......|. ...| . ..|+++++|++||.|.+.+|-..||+.
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~-------i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G 126 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV-------NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEG 126 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB-------CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEE
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee-------cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEE
Confidence 3578999999999988653 3776541111112232 1222 2 345567899999999998898889999
Q ss_pred eEEecCCC
Q 026789 121 AINVSARG 128 (233)
Q Consensus 121 ~I~V~~~~ 128 (233)
.|.|....
T Consensus 127 ~i~V~~~~ 134 (447)
T 2dv6_A 127 NIQVLPGN 134 (447)
T ss_dssp EEEEESSC
T ss_pred EEEEeCCc
Confidence 99997643
No 45
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.90 E-value=0.06 Score=43.99 Aligned_cols=66 Identities=17% Similarity=0.161 Sum_probs=43.6
Q ss_pred cCeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCc-CCCC---CceEEeccCCCeeEecCCCCCCCC---CC
Q 026789 48 ANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSR-TTNS---PASVTLTASGPHYFICSFPGHCLG---GQ 118 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~-~~~G---~~~v~l~~~G~~yFic~~~~hC~~---Gm 118 (233)
+...+.+|+.+.|...+. .|+...- ++ .++. ...| ...++.+++|.|||+|+. .|.. +|
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP---~l-------gik~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M 160 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVE---GT-------NINVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNM 160 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEET---TS-------SCEEEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGC
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEEC---CC-------CeEEEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCC
Confidence 457788899999987653 3665541 11 1111 1123 246778999999999994 5654 59
Q ss_pred eeeEEec
Q 026789 119 KLAINVS 125 (233)
Q Consensus 119 k~~I~V~ 125 (233)
++.|.|.
T Consensus 161 ~g~V~V~ 167 (168)
T 3s8f_B 161 FGTIVVK 167 (168)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999885
No 46
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=94.88 E-value=0.0061 Score=48.62 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=48.6
Q ss_pred eeeeeCCEEEE---EecCC------CceEEEEcCCCCCcCCCCC-CCCcC----CCCCce--------------EEeccC
Q 026789 50 QTFTVGDTLVF---NFAAG------NHDVTRVTQSSFNACNTTS-PLSRT----TNSPAS--------------VTLTAS 101 (233)
Q Consensus 50 ~~f~vGD~L~F---~y~~~------~H~V~~V~~~~y~~C~~~~-~~~~~----~~G~~~--------------v~l~~~ 101 (233)
..+++||.|-| +|..+ ...++.|++.+|+.|+... ..... ..+... +++..-
T Consensus 23 v~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g 102 (140)
T 2vsm_B 23 LYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKN 102 (140)
T ss_dssp ECCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCC
Confidence 44578999988 45432 5778899999999998763 22111 122222 233322
Q ss_pred CCeeEecCCC-----------CCCCC-CCeeeEEecC
Q 026789 102 GPHYFICSFP-----------GHCLG-GQKLAINVSA 126 (233)
Q Consensus 102 G~~yFic~~~-----------~hC~~-Gmk~~I~V~~ 126 (233)
-.||||++-. |-|.. .|||.|.|..
T Consensus 103 ~~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 103 KDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred CceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 3578888743 47865 7999999863
No 47
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=93.76 E-value=0.06 Score=43.64 Aligned_cols=36 Identities=14% Similarity=0.272 Sum_probs=27.3
Q ss_pred CeeeeeCCEEEE---EecC--------CCceEEEEcCCCCCcCCCCC
Q 026789 49 NQTFTVGDTLVF---NFAA--------GNHDVTRVTQSSFNACNTTS 84 (233)
Q Consensus 49 ~~~f~vGD~L~F---~y~~--------~~H~V~~V~~~~y~~C~~~~ 84 (233)
.+.+++||.|-+ +|.. ....+++|++.+|++|+...
T Consensus 31 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 31 TVEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 467889999977 5542 23457899999999998754
No 48
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.84 E-value=0.098 Score=50.71 Aligned_cols=67 Identities=18% Similarity=0.309 Sum_probs=46.5
Q ss_pred cCeeeeeCCEEEEEecCC------CceEEEEcCCCCCcCCCCCCCC-cCCCC---CceEEeccCCCeeEecCCCCCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAG------NHDVTRVTQSSFNACNTTSPLS-RTTNS---PASVTLTASGPHYFICSFPGHCLGG 117 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~------~H~V~~V~~~~y~~C~~~~~~~-~~~~G---~~~v~l~~~G~~yFic~~~~hC~~G 117 (233)
+..++.+||.|.|...+. .|++..-+ +. +. ....| ...|+.+++|.|||+|+. .|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs---lG-------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~ 625 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN---HG-------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHAL 625 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT---TT-------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTT
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC---CC-------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCC
Confidence 568899999999987762 58776521 11 11 11223 246777999999999995 67654
Q ss_pred ---CeeeEEecC
Q 026789 118 ---QKLAINVSA 126 (233)
Q Consensus 118 ---mk~~I~V~~ 126 (233)
|+..|.|..
T Consensus 626 Hs~M~G~ViVEP 637 (638)
T 3sbq_A 626 HMEMVGRMMVEP 637 (638)
T ss_dssp CTTCEEEEEEEC
T ss_pred cccceEEEEEec
Confidence 999998863
No 49
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.62 E-value=0.1 Score=50.46 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=46.4
Q ss_pred cCeeeeeCCEEEEEecCC------CceEEEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCC---CCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAG------NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSF---PGHCL 115 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~------~H~V~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~---~~hC~ 115 (233)
...++++||.|.|.+.+. .|++..-+. .. .+ ....| ...|+++++|.|||+|.. ..|
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~-gv-~~-------~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H-- 581 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY-GV-AM-------EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH-- 581 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTT-TE-EE-------EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCC-Cc-ce-------eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--
Confidence 467899999999987652 477765211 10 01 11223 246778899999999993 244
Q ss_pred CCCeeeEEecCC
Q 026789 116 GGQKLAINVSAR 127 (233)
Q Consensus 116 ~Gmk~~I~V~~~ 127 (233)
.||+..|.|...
T Consensus 582 ~gM~G~IiV~p~ 593 (595)
T 1fwx_A 582 MEMRGRMLVEPK 593 (595)
T ss_dssp TTCEEEEEEECC
T ss_pred cCCEEEEEEEcC
Confidence 499999998753
No 50
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=89.46 E-value=0.25 Score=38.85 Aligned_cols=36 Identities=11% Similarity=0.232 Sum_probs=27.6
Q ss_pred CeeeeeCCEEEE---EecC--------CCceEEEEcCCCCCcCCCCC
Q 026789 49 NQTFTVGDTLVF---NFAA--------GNHDVTRVTQSSFNACNTTS 84 (233)
Q Consensus 49 ~~~f~vGD~L~F---~y~~--------~~H~V~~V~~~~y~~C~~~~ 84 (233)
.+.+++||.|-+ +|.. ....++.|++++|++|+...
T Consensus 21 ~v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 21 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred eEEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 457789999977 5643 23667899999999998654
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=85.97 E-value=0.52 Score=41.51 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=47.8
Q ss_pred cCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCC-C--ceEEeccCCCeeEecCCCC----CCC
Q 026789 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNS-P--ASVTLTASGPHYFICSFPG----HCL 115 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G-~--~~v~l~~~G~~yFic~~~~----hC~ 115 (233)
..++++.||.|++++.+. .|++..-.. .+. +....+.....| . ..|+++..|++||.|...+ |-.
T Consensus 65 P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~-~~~--~~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 141 (336)
T 1oe1_A 65 PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA-TGA--LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVV 141 (336)
T ss_dssp CCEEEETTCEEEEEEEECTTCCSCBCCEETTS-CSG--GGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH
T ss_pred CeEEEcCCCEEEEEEEcCCCCCccccceECCC-CCC--CCCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHh
Confidence 357889999999888763 466654211 110 000111112233 2 4566688999999999754 556
Q ss_pred CCCeeeEEecCC
Q 026789 116 GGQKLAINVSAR 127 (233)
Q Consensus 116 ~Gmk~~I~V~~~ 127 (233)
.||...+.|...
T Consensus 142 ~Gl~G~liV~~~ 153 (336)
T 1oe1_A 142 SGMSGTLMVLPR 153 (336)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCeEEEEEecC
Confidence 899999888643
No 52
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=85.78 E-value=0.53 Score=41.44 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=47.9
Q ss_pred cCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCC-----CC
Q 026789 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPG-----HC 114 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~-----hC 114 (233)
..++++.||.|++++.+. -|.+..-.....+.- ..+.....| ...|+++.+|++||.|-..+ |-
T Consensus 64 P~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 140 (333)
T 1mzy_A 64 PLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHV 140 (333)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHH
T ss_pred CcEEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhh
Confidence 457889999999988764 366654211111100 011112223 24566688999999999864 77
Q ss_pred CCCCeeeEEecC
Q 026789 115 LGGQKLAINVSA 126 (233)
Q Consensus 115 ~~Gmk~~I~V~~ 126 (233)
..||...+.|..
T Consensus 141 ~~Gl~G~~iV~~ 152 (333)
T 1mzy_A 141 VSGMAGCIMVLP 152 (333)
T ss_dssp HTTCEEEEEEEC
T ss_pred hCCCEEEEEEcc
Confidence 789999888864
No 53
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=81.51 E-value=1 Score=39.67 Aligned_cols=78 Identities=17% Similarity=0.177 Sum_probs=46.1
Q ss_pred cCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCCC--ceEEeccCCCeeEecCCC---CCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSP--ASVTLTASGPHYFICSFP---GHCLGG 117 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~---~hC~~G 117 (233)
..++++.||+|++++.+. .|++.-=-....+. ......+...+. ..|+++.+|++||-|... .|-..|
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG--~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~G 147 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG--GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANG 147 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GTTTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC--CCcceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcc
Confidence 468899999999987654 35553200000110 000011222222 356668899999999863 455679
Q ss_pred CeeeEEecCC
Q 026789 118 QKLAINVSAR 127 (233)
Q Consensus 118 mk~~I~V~~~ 127 (233)
|...|.|...
T Consensus 148 l~G~~iV~~~ 157 (327)
T 1kbv_A 148 MYGLILVEPK 157 (327)
T ss_dssp CEEEEEEECT
T ss_pred eEEEEEEecC
Confidence 9999988753
No 54
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=80.40 E-value=0.94 Score=38.19 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=6.7
Q ss_pred CeeeeeCCEEE
Q 026789 49 NQTFTVGDTLV 59 (233)
Q Consensus 49 ~~~f~vGD~L~ 59 (233)
+..++|||+|.
T Consensus 18 Kt~a~vGDIIt 28 (227)
T 3ghp_A 18 KNAAEVGEIIK 28 (227)
T ss_dssp CSCCCTTCEEE
T ss_pred cceeecCcEEE
Confidence 34567777763
No 55
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=78.63 E-value=1 Score=41.03 Aligned_cols=79 Identities=14% Similarity=0.158 Sum_probs=46.4
Q ss_pred ccCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCCC--ceEEeccCCCeeEecC---CCCCCCC
Q 026789 47 AANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSP--ASVTLTASGPHYFICS---FPGHCLG 116 (233)
Q Consensus 47 a~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G~--~~v~l~~~G~~yFic~---~~~hC~~ 116 (233)
...++++.||+|++++.+. .|++..=-....+. ......+...+. ..|+++.+|++||.|- ...|=..
T Consensus 59 gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG--~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 136 (442)
T 2zoo_A 59 GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG--GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIAN 136 (442)
T ss_dssp CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC--CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhC
Confidence 3467899999999988764 35544310000010 000011112222 3566678999999994 3456678
Q ss_pred CCeeeEEecCC
Q 026789 117 GQKLAINVSAR 127 (233)
Q Consensus 117 Gmk~~I~V~~~ 127 (233)
||...+.|...
T Consensus 137 Gl~G~~iv~~~ 147 (442)
T 2zoo_A 137 GMYGLILVEPK 147 (442)
T ss_dssp TCEEEEEEECT
T ss_pred ccEEEEEEeCC
Confidence 99988888743
No 56
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=77.47 E-value=1.7 Score=38.28 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=47.5
Q ss_pred cCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCC----CCC
Q 026789 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPG----HCL 115 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~----hC~ 115 (233)
..++++.||.|++++.+. .|.+..-.....+ + .........| ...|+++..|++||.|...+ |-.
T Consensus 71 P~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~ 147 (340)
T 2bw4_A 71 PLMVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVT 147 (340)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH
T ss_pred CcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHh
Confidence 357889999999988764 3665541110000 0 0111112223 24566778999999999764 566
Q ss_pred CCCeeeEEecCC
Q 026789 116 GGQKLAINVSAR 127 (233)
Q Consensus 116 ~Gmk~~I~V~~~ 127 (233)
.||...+.|...
T Consensus 148 ~Gl~G~~iV~~~ 159 (340)
T 2bw4_A 148 SGMNGAIMVLPR 159 (340)
T ss_dssp TTCEEEEEEECT
T ss_pred CcCEEEEEEccC
Confidence 899988888653
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=76.30 E-value=1.8 Score=40.61 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=27.7
Q ss_pred ceEEe-ccCCCeeEecCCCCCCCCCCeeeEEecCC
Q 026789 94 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 127 (233)
Q Consensus 94 ~~v~l-~~~G~~yFic~~~~hC~~Gmk~~I~V~~~ 127 (233)
.+|++ +..|++||-|-...|-..||...+.|...
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 150 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP 150 (521)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEecCCCCccEEEEeccCCchhcCceEEEEEcCC
Confidence 45664 57899999999988888899999888654
No 58
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=73.52 E-value=2.6 Score=36.30 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=46.2
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEEE--cCCCCCcCCCCCCCCcCCCCC--ceEEeccCCCeeEecCCC---CCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTRV--TQSSFNACNTTSPLSRTTNSP--ASVTLTASGPHYFICSFP---GHCLGG 117 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~V--~~~~y~~C~~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~---~hC~~G 117 (233)
..++++.||.|++++.+. .|++--= .....|.--......+...+. ..++++.+|++||-|-.. .|=..|
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 145 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKG 145 (288)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred CcEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCc
Confidence 457899999999988653 2343320 000111000000001112222 456778999999999886 366789
Q ss_pred CeeeEEecCC
Q 026789 118 QKLAINVSAR 127 (233)
Q Consensus 118 mk~~I~V~~~ 127 (233)
|...|.|...
T Consensus 146 l~G~liV~~~ 155 (288)
T 3gdc_A 146 LYGGFIVEPK 155 (288)
T ss_dssp CEEEEEEECS
T ss_pred CeEEEEEeCC
Confidence 9998888654
No 59
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=72.65 E-value=2.6 Score=35.53 Aligned_cols=8 Identities=0% Similarity=0.272 Sum_probs=3.6
Q ss_pred EEEEEecC
Q 026789 57 TLVFNFAA 64 (233)
Q Consensus 57 ~L~F~y~~ 64 (233)
.|-.+|++
T Consensus 43 QvNIKYDP 50 (227)
T 3ghp_A 43 QVNIKYDP 50 (227)
T ss_dssp EEEEECCT
T ss_pred EEeeeeCh
Confidence 34445544
No 60
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=69.81 E-value=1.2 Score=33.83 Aligned_cols=14 Identities=36% Similarity=0.788 Sum_probs=12.5
Q ss_pred ceeeecCCCCccCC
Q 026789 196 ATHVVGGALGWTVP 209 (233)
Q Consensus 196 ~~~~VG~~~GW~~~ 209 (233)
++|+|||+.||+++
T Consensus 2 ~~~~VG~~~GW~~~ 15 (116)
T 1x9u_A 2 EDYDVGGDMEWKRP 15 (116)
T ss_dssp CEEETTGGGCSSCC
T ss_pred eEEEECCcCcCcCC
Confidence 57999999999986
No 61
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=68.06 E-value=3.4 Score=29.78 Aligned_cols=16 Identities=38% Similarity=0.912 Sum_probs=12.5
Q ss_pred eeeeeCCEEEE-EecCC
Q 026789 50 QTFTVGDTLVF-NFAAG 65 (233)
Q Consensus 50 ~~f~vGD~L~F-~y~~~ 65 (233)
..|++||.|+| +|..+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 45999999999 47544
No 62
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=67.43 E-value=18 Score=31.98 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=52.1
Q ss_pred eEEEecCCCCCccCCCCCCCcccc----ccCeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCcC-CCC---
Q 026789 23 TRHVVGDALGWIVPPNGPATYSNW----AANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRT-TNS--- 92 (233)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~Y~~W----a~~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~-~~G--- 92 (233)
+..++|-.=.|.+ .|.+- .+...+-+|..|.|...+. .|+...-+. .++.. -.|
T Consensus 128 tIkVig~QW~W~f------~Ypd~~i~t~n~l~lP~g~~V~~~lTS~DViHsf~IP~l----------g~k~DaiPGr~n 191 (315)
T 1fft_B 128 TIEVVSMDWKWFF------IYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRL----------GSQIYAMAGMQT 191 (315)
T ss_dssp EEEEECCTTSCEE------ECTTTCCEEESBCCCCSSSEEEEEECBSSSCEEEEEGGG----------TEEEEECBTSCE
T ss_pred eEEEeeeeccEEE------ecCCCcccccceEEEeCCCEEEEEEEeCCccceeeeccc----------CcEEeecCCcce
Confidence 3555665556765 23221 1345688999999998753 255544111 11111 122
Q ss_pred CceEEeccCCCeeEecCCCCCCCCC---CeeeEEec
Q 026789 93 PASVTLTASGPHYFICSFPGHCLGG---QKLAINVS 125 (233)
Q Consensus 93 ~~~v~l~~~G~~yFic~~~~hC~~G---mk~~I~V~ 125 (233)
...++.+++|.||..|+ ..|..| |++.|.|.
T Consensus 192 ~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 192 RLHLIANEPGTYDGISA--SYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EEEEECCSCBCCEEBCC--SCCSTTTTTCCEECCBC
T ss_pred eeEEecCCCeEEEEecc--ccchhhHHhccceEEEe
Confidence 23577899999999999 578765 88888776
No 63
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=64.29 E-value=4.3 Score=34.69 Aligned_cols=81 Identities=12% Similarity=0.098 Sum_probs=47.5
Q ss_pred cCeeeeeCCEEEEEecC---CCceEEE------EcCC-CCCcCCC----CCCCCcCCCCCceE--Eec---cCCCeeEec
Q 026789 48 ANQTFTVGDTLVFNFAA---GNHDVTR------VTQS-SFNACNT----TSPLSRTTNSPASV--TLT---ASGPHYFIC 108 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~---~~H~V~~------V~~~-~y~~C~~----~~~~~~~~~G~~~v--~l~---~~G~~yFic 108 (233)
...+++.||+++|.+.+ ..|.+-. |... .++.-.. .+.+.+.......+ ..+ .+|.++|-|
T Consensus 168 p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HC 247 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHC 247 (276)
T ss_dssp CCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEEC
Confidence 35789999999887754 2455533 1111 0110000 00011112222333 334 489999999
Q ss_pred CCCCCCCCCCeeeEEecCCC
Q 026789 109 SFPGHCLGGQKLAINVSARG 128 (233)
Q Consensus 109 ~~~~hC~~Gmk~~I~V~~~~ 128 (233)
-+..|=..||...+.|....
T Consensus 248 H~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 248 HVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp CSHHHHHTTCEEEEEEECTT
T ss_pred CCchHhhCCCeEEEEEeCCC
Confidence 99999999999999998754
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=64.25 E-value=7 Score=36.81 Aligned_cols=80 Identities=9% Similarity=0.064 Sum_probs=48.6
Q ss_pred cCeeeeeCCEEEEEecCCC----ceEEE----EcCCC-CCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAGN----HDVTR----VTQSS-FNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHCL 115 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~----H~V~~----V~~~~-y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~hC~ 115 (233)
-.++++.||+|+.++.+.. ++|-- +..+. .|.-- .........| ..+|+++..|++||-|-...|-.
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~-~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~ 112 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTA-SISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRS 112 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCB-TTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGG
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCc-ccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHh
Confidence 4688999999999887542 23321 11110 11100 0000011223 24677789999999999988888
Q ss_pred CCCeeeEEecCCC
Q 026789 116 GGQKLAINVSARG 128 (233)
Q Consensus 116 ~Gmk~~I~V~~~~ 128 (233)
.||...|.|....
T Consensus 113 ~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 113 AGLYGSLIVDPPQ 125 (552)
T ss_dssp GTCEEEEEEECCT
T ss_pred ccCeeeEEEeCCc
Confidence 8999888887653
No 65
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=62.93 E-value=4.6 Score=35.62 Aligned_cols=78 Identities=12% Similarity=0.131 Sum_probs=43.5
Q ss_pred cCeeeeeCCEEEEEecCCC---ceE-----EEEcCCCCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCC--CC
Q 026789 48 ANQTFTVGDTLVFNFAAGN---HDV-----TRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPG--HC 114 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~---H~V-----~~V~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~--hC 114 (233)
..++++.||+|++++.+.. ++| .+......|.=-.. .......| ...|+++..|++||-|.... |-
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~v-tq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~ 113 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGV-TQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHV 113 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTT-TBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHT
T ss_pred CeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCcc-ccCccCCCCeEEEEEECCCCEEEEEEecCCchhhh
Confidence 4678999999999886531 222 21111001110000 00011223 24677788999999998754 44
Q ss_pred C-CCCeeeEEecC
Q 026789 115 L-GGQKLAINVSA 126 (233)
Q Consensus 115 ~-~Gmk~~I~V~~ 126 (233)
. .||...+.|..
T Consensus 114 ~~~Gl~G~liV~p 126 (339)
T 2zwn_A 114 GVRGMWGPLIVDP 126 (339)
T ss_dssp TTSCCEEEEEEEC
T ss_pred hcCCceEeEEecC
Confidence 4 78888887753
No 66
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=61.98 E-value=25 Score=30.84 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=41.7
Q ss_pred CeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCcC-CCCC---ceEEeccCCCeeEecCCCCCCCCC---Ce
Q 026789 49 NQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRT-TNSP---ASVTLTASGPHYFICSFPGHCLGG---QK 119 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~-~~G~---~~v~l~~~G~~yFic~~~~hC~~G---mk 119 (233)
...+.+|+.|.|...+. .|+...-+. .++.. -.|. ..++.+++|.||..|+ .-|..| |+
T Consensus 190 ~lvlP~g~~V~~~ltS~DViHsf~iP~l----------g~k~daiPG~~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~ 257 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATDVIHAWTIPAF----------AVKQDAVPGRIAQLWFSVDQEGVYFGQCS--ELCGINHAYMP 257 (298)
T ss_dssp CEEEESSSEEEEEEEESSSCEEEEEGGG----------TEEEEECTTCCEEEEEECSSSEEEEECCC--SCCSTTTTSCC
T ss_pred eEEEEcCCEEEEEEEeCCccceeeEccc----------CceEEecCCceEEEEEEeCCCEEEEEEcc--cccCcCccCCe
Confidence 34567888888877653 355543111 11111 1232 4577899999999999 567665 88
Q ss_pred eeEEecC
Q 026789 120 LAINVSA 126 (233)
Q Consensus 120 ~~I~V~~ 126 (233)
+.|.|.+
T Consensus 258 ~~v~vvs 264 (298)
T 3hb3_B 258 IVVKAVS 264 (298)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 8888864
No 67
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=61.52 E-value=8.2 Score=36.29 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=48.1
Q ss_pred cCeeeeeCCEEEEEecCCC---------ceEEEEcCCCCCc-CC-CCCCCCcCCCC--CceEEec-cCCCeeEecCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAGN---------HDVTRVTQSSFNA-CN-TTSPLSRTTNS--PASVTLT-ASGPHYFICSFPGH 113 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~---------H~V~~V~~~~y~~-C~-~~~~~~~~~~G--~~~v~l~-~~G~~yFic~~~~h 113 (233)
-.++++.||.|+.++.+.. |.+.+......|. .. ...+| ...+ ..+|+++ ..|++||-|-...|
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI--~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 111 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPI--APGSTMLYNFTVDYNVGTYWYHSHTDGQ 111 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCB--CTTCEEEEEEECSSCCEEEEEECCSSSG
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCc--CCCCeEEEEEEeCccceeEEEEEcCccc
Confidence 3578999999999987643 2222110000110 00 00011 1122 2467777 89999999999888
Q ss_pred CCCCCeeeEEecCCC
Q 026789 114 CLGGQKLAINVSARG 128 (233)
Q Consensus 114 C~~Gmk~~I~V~~~~ 128 (233)
-..||...+.|....
T Consensus 112 ~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 112 YEDGMKGLFIIKDDS 126 (534)
T ss_dssp GGGTCEEEEEEECTT
T ss_pred ccCcceeeEEeCCCC
Confidence 888999988887653
No 68
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=60.24 E-value=5.9 Score=37.51 Aligned_cols=78 Identities=13% Similarity=0.180 Sum_probs=47.6
Q ss_pred cCeeeeeCCEEEEEecCCC----ceEEE----EcCC-CCCc-CC-CCCCCCcCCCC---CceEEeccCCCeeEecCCCCC
Q 026789 48 ANQTFTVGDTLVFNFAAGN----HDVTR----VTQS-SFNA-CN-TTSPLSRTTNS---PASVTLTASGPHYFICSFPGH 113 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~----H~V~~----V~~~-~y~~-C~-~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~h 113 (233)
-.++++.||+|++++.+.. ++|-- +... ..|. -. ...+| ...| ..+|+++..|++||-|-...|
T Consensus 67 P~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I--~P~G~~~~Y~f~~~q~GT~wYH~H~~~q 144 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI--PPKGGQRTYRWRARQYGTSWYHSHFSAQ 144 (559)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB--CTTTEEEEEEEECCSCEEEEEEECSTTG
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCcc--CCCCCeEEEEEECCCCEEEEEEEcccch
Confidence 4578899999999887532 33321 1100 1111 00 00011 1203 256778899999999999888
Q ss_pred CCCCCeeeEEecCC
Q 026789 114 CLGGQKLAINVSAR 127 (233)
Q Consensus 114 C~~Gmk~~I~V~~~ 127 (233)
-..||...+.|...
T Consensus 145 ~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 145 YGNGVVGTIQINGP 158 (559)
T ss_dssp GGGTCEEEEEEECC
T ss_pred hcCCceEEEEecCC
Confidence 88899888887654
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=58.05 E-value=8.1 Score=36.98 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=28.4
Q ss_pred ceEEeccCCCeeEecCCCCCCCCCCeeeEEecCC
Q 026789 94 ASVTLTASGPHYFICSFPGHCLGGQKLAINVSAR 127 (233)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~hC~~Gmk~~I~V~~~ 127 (233)
.+|++++.|++||-|-...|-..||...|.|...
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 5677889999999999888888899888888643
No 70
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=57.92 E-value=13 Score=31.89 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=43.0
Q ss_pred CeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCcC-CCC---CceEEeccCCCeeEecCCCCCCCCC---Ce
Q 026789 49 NQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRT-TNS---PASVTLTASGPHYFICSFPGHCLGG---QK 119 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~-~~G---~~~v~l~~~G~~yFic~~~~hC~~G---mk 119 (233)
...+.+|+.|.|...+. .|+...-+. .++.. -.| ...++.+++|.||..|+ .-|..| |+
T Consensus 172 ~l~lP~g~~v~~~~tS~DViHsf~ip~l----------~~k~da~PG~~n~~~~~~~~~G~y~g~Cs--e~CG~~H~~M~ 239 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGADVIHSWTVPAF----------GVKQDAVPGRLAQLWFRAEREGIFFGQCS--ELCGISHAYMP 239 (262)
T ss_dssp CEEEETTSEEEEEEEESSSCEEEEEGGG----------TEEEEECBTCCEEEEEECCSCEEEEECCC--SCCSTTGGGCC
T ss_pred eEEEecCCEEEEEEEECcccceeeeccc----------CceEEecCCceeEEEEecCCcEEEEEECh--HhcccCcccCe
Confidence 45678999999988753 255544111 11111 122 23677899999999999 678776 88
Q ss_pred eeEEecC
Q 026789 120 LAINVSA 126 (233)
Q Consensus 120 ~~I~V~~ 126 (233)
+.|.|.+
T Consensus 240 ~~v~vv~ 246 (262)
T 2gsm_B 240 ITVKVVS 246 (262)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 8887754
No 71
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=56.23 E-value=9.4 Score=34.52 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=41.3
Q ss_pred CeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCCCCCCCCcCCCCC--ceEEeccCCCeeEecCCC---CCCCCCC
Q 026789 49 NQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSP--ASVTLTASGPHYFICSFP---GHCLGGQ 118 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~---~hC~~Gm 118 (233)
.++++.||+++|++.+. .|++-.=.....|.- ...+.+..... ..|+++.+|.+||.|... .|-..||
T Consensus 196 ~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~~DG~--~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl 273 (447)
T 2dv6_A 196 FLRVRVGDTVELHLKNHKDSLMVHSVDFHGATGPGGA--AAFTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGM 273 (447)
T ss_dssp CEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGG--GGGCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTC
T ss_pred eEEecCCCEEEEEEEeCCCCceeEEEeeccccCCCCC--CccEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCC
Confidence 46778899998877654 133321000000100 00011122222 345567889999999863 2335799
Q ss_pred eeeEEecC
Q 026789 119 KLAINVSA 126 (233)
Q Consensus 119 k~~I~V~~ 126 (233)
...|.|..
T Consensus 274 ~g~l~v~~ 281 (447)
T 2dv6_A 274 YGLLLVEP 281 (447)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 88888864
No 72
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=55.64 E-value=3 Score=36.27 Aligned_cols=78 Identities=14% Similarity=0.272 Sum_probs=33.2
Q ss_pred CeeeeeCCEEEEEecCCCc--eEEEE--cCCCCCcCC--CCCCCCcCCCCC--ceEEeccCCCeeEecCCCCCCCCCCee
Q 026789 49 NQTFTVGDTLVFNFAAGNH--DVTRV--TQSSFNACN--TTSPLSRTTNSP--ASVTLTASGPHYFICSFPGHCLGGQKL 120 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~~H--~V~~V--~~~~y~~C~--~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~~hC~~Gmk~ 120 (233)
..+++.||++.|.+-+... ....+ ....|+. + ..+.+.+..... ..|+.+.+|.++|.|-+..|...||..
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~-dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~ 294 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ-NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 294 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE-TTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-CCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeE
Confidence 4677889999998765321 22222 1111211 0 011111222222 356667899999999999999999999
Q ss_pred eEEecCC
Q 026789 121 AINVSAR 127 (233)
Q Consensus 121 ~I~V~~~ 127 (233)
.+.|...
T Consensus 295 ~~~V~~~ 301 (306)
T 1sdd_A 295 YIDIKNC 301 (306)
T ss_dssp CC-----
T ss_pred EEEEecC
Confidence 9888753
No 73
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=55.61 E-value=9.8 Score=35.53 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=27.7
Q ss_pred ceEEe-ccCCCeeEecCCCCCCCCCCeeeEEecCC
Q 026789 94 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 127 (233)
Q Consensus 94 ~~v~l-~~~G~~yFic~~~~hC~~Gmk~~I~V~~~ 127 (233)
.+|++ +..|++||-|-...|-..||...+.|...
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDP 130 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCc
Confidence 46677 67999999999888878899988888643
No 74
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=55.03 E-value=10 Score=35.49 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=27.6
Q ss_pred ceEEe-ccCCCeeEecCCCCCCCCCCeeeEEecCC
Q 026789 94 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 127 (233)
Q Consensus 94 ~~v~l-~~~G~~yFic~~~~hC~~Gmk~~I~V~~~ 127 (233)
.+|++ +..|++||-|-...|-..||...|.|...
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCC
Confidence 46666 57999999999888878899988888643
No 75
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=50.96 E-value=7.7 Score=33.94 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=43.6
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEEE--cCC---CCCcCCCCCCCCcCCCC---CceEEeccCCCeeEecCCCCCC--
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTRV--TQS---SFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHC-- 114 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~V--~~~---~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~hC-- 114 (233)
-.++++.||.|++++.+. .|++--- ... ..|.=. .........| ...++++..|++||.|....+=
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p-~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~ 112 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVP-HATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHV 112 (318)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCB-TTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHH
T ss_pred ceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCc-ccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhh
Confidence 357899999999988753 2333221 000 111100 0000011222 2467778999999999874321
Q ss_pred -CCCCeeeEEecCC
Q 026789 115 -LGGQKLAINVSAR 127 (233)
Q Consensus 115 -~~Gmk~~I~V~~~ 127 (233)
..||...|.|...
T Consensus 113 ~~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 113 TMRGMWGPLIVEPK 126 (318)
T ss_dssp HHSCCEEEEEEECS
T ss_pred ccCCCEEEEEEcCC
Confidence 2699888888643
No 76
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=50.39 E-value=11 Score=32.90 Aligned_cols=35 Identities=17% Similarity=0.026 Sum_probs=29.3
Q ss_pred ceEEeccCCCeeEecCCCCCC-CCCCeeeEEecCCC
Q 026789 94 ASVTLTASGPHYFICSFPGHC-LGGQKLAINVSARG 128 (233)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~hC-~~Gmk~~I~V~~~~ 128 (233)
..|+.+.+|.|+|.|....|+ +.||...+.|....
T Consensus 285 vlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 356677899999999988888 89999999997643
No 77
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=49.87 E-value=5.9 Score=36.37 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=45.7
Q ss_pred cCeeeeeCCEEEEEecCCC---ceEE-----EEcCC-CCCcCCCCCCCCcCCCCCceEEecc-CCCeeEecCC----CCC
Q 026789 48 ANQTFTVGDTLVFNFAAGN---HDVT-----RVTQS-SFNACNTTSPLSRTTNSPASVTLTA-SGPHYFICSF----PGH 113 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~---H~V~-----~V~~~-~y~~C~~~~~~~~~~~G~~~v~l~~-~G~~yFic~~----~~h 113 (233)
-.+.++.||.|++++.+.. ++|- +-... +...|- +.-..+=.++++++. .|++||-|-. ..|
T Consensus 50 P~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~----i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q 125 (451)
T 2uxt_A 50 PTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARM----MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQ 125 (451)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGC----BCTTCEECCEEECCSCSEEEEEEECCTTTHHHH
T ss_pred ceEEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcCc----CCCCCeEEEEEEcCCCCcceEEecCCCCchhhh
Confidence 3577899999999987642 3332 11110 111231 111111135788886 9999999987 345
Q ss_pred CCCCCeeeEEecCC
Q 026789 114 CLGGQKLAINVSAR 127 (233)
Q Consensus 114 C~~Gmk~~I~V~~~ 127 (233)
-..||-..+.|...
T Consensus 126 ~~~Gl~G~liV~~~ 139 (451)
T 2uxt_A 126 VYNGLAGMWLVEDE 139 (451)
T ss_dssp HHTTCEEEEEEECH
T ss_pred HhhcceEEEEEecC
Confidence 56888888887653
No 78
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=46.73 E-value=7.6 Score=33.88 Aligned_cols=35 Identities=11% Similarity=0.002 Sum_probs=29.4
Q ss_pred ceEEeccCCCeeEecCCCCCC-CCCCeeeEEecCCC
Q 026789 94 ASVTLTASGPHYFICSFPGHC-LGGQKLAINVSARG 128 (233)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~hC-~~Gmk~~I~V~~~~ 128 (233)
..|+.+.+|.++|.|-...|+ +.||...+.|....
T Consensus 285 v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 285 ALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 346667899999999999999 99999999997643
No 79
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=46.58 E-value=6.3 Score=40.36 Aligned_cols=75 Identities=20% Similarity=0.235 Sum_probs=51.5
Q ss_pred CeeeeeCCEEEEEecC-C----CceEEEEc------CCCCCcCCCCCCCCcCCCCCceEEeccCCCeeEecCCCCCCCCC
Q 026789 49 NQTFTVGDTLVFNFAA-G----NHDVTRVT------QSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGG 117 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~-~----~H~V~~V~------~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~hC~~G 117 (233)
...+..||.|+.+... + -|++.+-. ...++.|... ...+-...++.+..|++|+-|.+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~----pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLF----PQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEEC----TTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeec----CCceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 5789999999997763 2 47776521 2223445311 111123456667899999999999999999
Q ss_pred CeeeEEecCC
Q 026789 118 QKLAINVSAR 127 (233)
Q Consensus 118 mk~~I~V~~~ 127 (233)
|+..+.|...
T Consensus 709 m~g~~~V~~~ 718 (1065)
T 2j5w_A 709 MKQKYTVNQC 718 (1065)
T ss_dssp CEEEEEEECC
T ss_pred cEEEEEEcCC
Confidence 9999999765
No 80
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=45.77 E-value=11 Score=31.39 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=51.0
Q ss_pred eEEEecCCCCCccCCCCCCCcccc----ccCeeeeeCCEEEEEecCC--CceEEEEcCCCCCcCCCCCCCCcC-CCCC--
Q 026789 23 TRHVVGDALGWIVPPNGPATYSNW----AANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRT-TNSP-- 93 (233)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~Y~~W----a~~~~f~vGD~L~F~y~~~--~H~V~~V~~~~y~~C~~~~~~~~~-~~G~-- 93 (233)
+..++|-.=.|.+ .|.+- .+...+.+|+.|.|...+. .|+...-+. .++.. .-|.
T Consensus 18 tIkVig~QW~W~f------~Ypd~~i~~~n~l~lP~g~~V~~~lTS~DViHSF~IP~l----------gvK~daiPGr~n 81 (205)
T 1cyx_A 18 TIEVVSMDWKWFF------IYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPRL----------GSQIYAMAGMQT 81 (205)
T ss_dssp EEEEEEETTEEEE------EETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEEGGG----------TEEEEECTTCCE
T ss_pred EEEEEEEEeEEEE------EeCCCCccccceEEEeCCCEEEEEEecCCceeeEEeccc----------CcEEEecCCceE
Confidence 4556675556765 22211 1345678899998888753 255543111 11111 1232
Q ss_pred -ceEEeccCCCeeEecCCCCCCCCC---CeeeEEec
Q 026789 94 -ASVTLTASGPHYFICSFPGHCLGG---QKLAINVS 125 (233)
Q Consensus 94 -~~v~l~~~G~~yFic~~~~hC~~G---mk~~I~V~ 125 (233)
..++.+++|.||..|+ .-|..| |++.|.|.
T Consensus 82 ~l~~~~~~pG~y~g~Cs--E~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 82 RLHLIANEPGTYDGICA--EICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECCSSSEEEEEEEC--SCCSTTSTTCCEEEEEE
T ss_pred EEEEEeCCCeEEEEEcc--cccccchhhceEEEEEE
Confidence 3566789999999999 577765 88888886
No 81
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=45.65 E-value=15 Score=32.42 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=47.2
Q ss_pred CeeeeeCCEEEEEecC---CCceEEE------EcCCC-CCcCCCCC------CCCcCCCCCceEEe-----ccCCCeeEe
Q 026789 49 NQTFTVGDTLVFNFAA---GNHDVTR------VTQSS-FNACNTTS------PLSRTTNSPASVTL-----TASGPHYFI 107 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~---~~H~V~~------V~~~~-y~~C~~~~------~~~~~~~G~~~v~l-----~~~G~~yFi 107 (233)
..+++.||+++|.+.+ ..|.+.. |...+ |.. ..+ .+.+.......|.+ +.+|.++|-
T Consensus 210 ~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~~--p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTG--PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCS--TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cEEeCCCCEEEEEEEcCCccccccEecCcEEEEeccCcccC--CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 5789999999987754 3466533 21110 100 000 00111122233333 468999999
Q ss_pred cCCCCCCCCCCeeeEEecCCC
Q 026789 108 CSFPGHCLGGQKLAINVSARG 128 (233)
Q Consensus 108 c~~~~hC~~Gmk~~I~V~~~~ 128 (233)
|-+..|=+.||...+.|....
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTT
T ss_pred CCCHHHHhccCcEEEEEecCC
Confidence 999999999999999997543
No 82
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=43.70 E-value=17 Score=34.29 Aligned_cols=73 Identities=11% Similarity=0.213 Sum_probs=43.9
Q ss_pred CeeeeeCCEEEEEecCCC--ceEEEE-cCCCCCcCCCCCCCCcCCCC--CceEEeccCCCeeEecCCCCCCCCCC-eeeE
Q 026789 49 NQTFTVGDTLVFNFAAGN--HDVTRV-TQSSFNACNTTSPLSRTTNS--PASVTLTASGPHYFICSFPGHCLGGQ-KLAI 122 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~~--H~V~~V-~~~~y~~C~~~~~~~~~~~G--~~~v~l~~~G~~yFic~~~~hC~~Gm-k~~I 122 (233)
+..++-|..|.|.=-... .-++.+ +..+...|...- ..|..= +.+..| ++|.|||..+...-|++|. ++.|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 488 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPP--FSFHAFELGKMYSV-ESGDYFMTASTTELCNDNNLRIHV 488 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCC--CccCcccccceEec-CCCceEecCChHHHHhCCceeEEE
Confidence 456778888888543221 111222 344455686431 112110 124455 4799999999999999997 8888
Q ss_pred Ee
Q 026789 123 NV 124 (233)
Q Consensus 123 ~V 124 (233)
.|
T Consensus 489 ~~ 490 (491)
T 3l6w_A 489 HV 490 (491)
T ss_pred Ee
Confidence 87
No 83
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=42.61 E-value=6.8 Score=33.62 Aligned_cols=77 Identities=10% Similarity=0.019 Sum_probs=46.3
Q ss_pred cCeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCC----CCCC-----CCcCCCCCc--eEEeccCCCeeEecCCC
Q 026789 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACN----TTSP-----LSRTTNSPA--SVTLTASGPHYFICSFP 111 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~----~~~~-----~~~~~~G~~--~v~l~~~G~~yFic~~~ 111 (233)
...+++.||++.|.+.+. .|.+..- ...|+--. ...+ +.+...+.. .++.+.+|.+.|.|-+.
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlh-G~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~ 273 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIH-GNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKT 273 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEET-TCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSH
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEc-CCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecCh
Confidence 357899999999877542 1555321 11111000 0000 111112222 34457899999999999
Q ss_pred CCCCCCCeeeEEec
Q 026789 112 GHCLGGQKLAINVS 125 (233)
Q Consensus 112 ~hC~~Gmk~~I~V~ 125 (233)
.|=+.||...+.|.
T Consensus 274 ~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 274 EFAELGWMGFFEVS 287 (288)
T ss_dssp HHHTTTCEEEEEEE
T ss_pred HHHhcCCCEEEEEe
Confidence 99999999999885
No 84
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=41.43 E-value=25 Score=30.57 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=26.1
Q ss_pred eEEeccCCCeeEecCCCCCCC------CCCeeeEEecCC
Q 026789 95 SVTLTASGPHYFICSFPGHCL------GGQKLAINVSAR 127 (233)
Q Consensus 95 ~v~l~~~G~~yFic~~~~hC~------~Gmk~~I~V~~~ 127 (233)
.|..+.+|.+.|-|-+..|-. .||...|.+...
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 455678999999999999998 467777777654
No 85
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=40.71 E-value=9 Score=37.91 Aligned_cols=77 Identities=9% Similarity=0.064 Sum_probs=47.2
Q ss_pred CeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCC----CCCCCCcCCCCCce--EEeccCCCeeEecCCCCCCCCC
Q 026789 49 NQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACN----TTSPLSRTTNSPAS--VTLTASGPHYFICSFPGHCLGG 117 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~----~~~~~~~~~~G~~~--v~l~~~G~~yFic~~~~hC~~G 117 (233)
..+++.||.+.+.+.+. .|.+..- .-.|.--. ..+.+.+...+... |+.+.+|.+.|.|-+..|...|
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlh-Gh~f~Vv~~dg~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~G 447 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFS-GHVFTVRKKEEYKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAG 447 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBS-SCCEECCSSSCCEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTB
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEc-CCEEEEEecCCceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccccc
Confidence 46789999999988652 3544321 11111100 01112223333333 4456889999999999999999
Q ss_pred CeeeEEecC
Q 026789 118 QKLAINVSA 126 (233)
Q Consensus 118 mk~~I~V~~ 126 (233)
|...+.|.+
T Consensus 448 M~~~~~V~s 456 (770)
T 2r7e_B 448 MSTLFLVYS 456 (770)
T ss_dssp CCCCCCBCC
T ss_pred ccccccccc
Confidence 999888854
No 86
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=40.42 E-value=12 Score=34.70 Aligned_cols=9 Identities=33% Similarity=0.527 Sum_probs=5.7
Q ss_pred CcccCCcee
Q 026789 223 NNFSVGDIL 231 (233)
Q Consensus 223 ~~F~vGD~L 231 (233)
-.|+.||.|
T Consensus 102 l~~~~gd~i 110 (535)
T 2h8h_A 102 LSFKKGERL 110 (535)
T ss_dssp CCBCTTCEE
T ss_pred CCcCCCCEE
Confidence 456777765
No 87
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=40.25 E-value=15 Score=30.88 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=24.3
Q ss_pred eEEeccCCCeeEecCCCCCCCCC---CeeeEEecC
Q 026789 95 SVTLTASGPHYFICSFPGHCLGG---QKLAINVSA 126 (233)
Q Consensus 95 ~v~l~~~G~~yFic~~~~hC~~G---mk~~I~V~~ 126 (233)
.++.+++|.||..|+ .-|..| |.+.|.|.+
T Consensus 183 ~~~~~~~G~y~g~Cs--e~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCS--EICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCC--SCCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEeh--hhcccccccCeEEEEEEc
Confidence 566789999999999 578876 888887754
No 88
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=39.12 E-value=12 Score=27.22 Aligned_cols=18 Identities=17% Similarity=0.338 Sum_probs=14.7
Q ss_pred cCeeeeeCCEEEEEecCC
Q 026789 48 ANQTFTVGDTLVFNFAAG 65 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~ 65 (233)
..+.+++||.|+|+|...
T Consensus 74 ~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 74 KDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHTCCTTCEEEEEECSS
T ss_pred HHcCCCCCCEEEEEEcCC
Confidence 456788999999999854
No 89
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=38.12 E-value=26 Score=32.42 Aligned_cols=79 Identities=9% Similarity=0.092 Sum_probs=46.4
Q ss_pred ccCeeeeeCCEEEEEecCCC--------ceEEE----EcCC-CCCcC-C-CCCCCCcCCCCC--ceEEe-ccCCCeeEec
Q 026789 47 AANQTFTVGDTLVFNFAAGN--------HDVTR----VTQS-SFNAC-N-TTSPLSRTTNSP--ASVTL-TASGPHYFIC 108 (233)
Q Consensus 47 a~~~~f~vGD~L~F~y~~~~--------H~V~~----V~~~-~y~~C-~-~~~~~~~~~~G~--~~v~l-~~~G~~yFic 108 (233)
.-.++++.||.|+.++.+.. ++|-- +... ..|.- . ...+ +...+. .+|++ +..|++||-|
T Consensus 33 GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~--I~PG~~~~Y~f~~~~~~GT~wYH~ 110 (503)
T 1hfu_A 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCP--ISPGHAFLYKFTPAGHAGTFWYHS 110 (503)
T ss_dssp SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCC--BCTTCEEEEEECCTTCCEEEEEEE
T ss_pred CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCC--cCCCCeEEEEEEeCCCCccEEEEe
Confidence 45688999999999887532 22211 1000 01110 0 0001 112222 34553 4689999999
Q ss_pred CCCCCCCCCCeeeEEecCC
Q 026789 109 SFPGHCLGGQKLAINVSAR 127 (233)
Q Consensus 109 ~~~~hC~~Gmk~~I~V~~~ 127 (233)
-...|-..||...+.|...
T Consensus 111 H~~~q~~~Gl~G~liV~~~ 129 (503)
T 1hfu_A 111 HFGTQYCDGLRGPMVIYDD 129 (503)
T ss_dssp CSTTGGGGTCEEEEEEECT
T ss_pred cchhhhhCcceeeEEEcCC
Confidence 9988888899999988654
No 90
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=35.93 E-value=24 Score=29.96 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=41.9
Q ss_pred CeeeeeCCEEEEEecCCC---ceEEEEcCCCCCcCCCCCCC--CcCCCC-C--ceEEecc-------------CCCeeEe
Q 026789 49 NQTFTVGDTLVFNFAAGN---HDVTRVTQSSFNACNTTSPL--SRTTNS-P--ASVTLTA-------------SGPHYFI 107 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~~---H~V~~V~~~~y~~C~~~~~~--~~~~~G-~--~~v~l~~-------------~G~~yFi 107 (233)
.++++.||.|++++.+.. ++|--= .-.+....-..++ .....| . ..+++++ .|.+||-
T Consensus 37 ~i~~~~Gd~v~v~~~N~~~~~~siH~H-G~~~~~~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH 115 (276)
T 3kw8_A 37 LIEVNEGDTLHIEFTNTMDVRASLHVH-GLDYEISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYH 115 (276)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEES-SSBCCGGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEE
T ss_pred eEEEECCCEEEEEEEECCCCCccEeec-CcccCCccCCCcCCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEe
Confidence 467899999999887642 222210 0001111000011 011222 2 4555653 4788899
Q ss_pred cCCCC------CCCCCCeeeEEecCC
Q 026789 108 CSFPG------HCLGGQKLAINVSAR 127 (233)
Q Consensus 108 c~~~~------hC~~Gmk~~I~V~~~ 127 (233)
|-..+ |=..||...+.|...
T Consensus 116 ~h~~~~~~~~~~~~~Gl~G~liV~~~ 141 (276)
T 3kw8_A 116 DHVVGTEHGTGGIRNGLYGPVIVRRK 141 (276)
T ss_dssp CSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred cCccccccchhhhhCccEEEEEEecC
Confidence 98753 445799888888754
No 91
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=34.88 E-value=39 Score=30.56 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCCCceEEEE-cCCCCCcCCCCCCCCcCCCCC---ceEEe--ccCCCeeEecCCCC----CCCCCCe
Q 026789 50 QTFTVGDTLVFNFAAGNHDVTRV-TQSSFNACNTTSPLSRTTNSP---ASVTL--TASGPHYFICSFPG----HCLGGQK 119 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~~H~V~~V-~~~~y~~C~~~~~~~~~~~G~---~~v~l--~~~G~~yFic~~~~----hC~~Gmk 119 (233)
++++.||+|+.++.+....-+.+ -..-.......+.......|. .++++ +..|++||-|-..+ |-..||.
T Consensus 49 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~ 128 (439)
T 2xu9_A 49 LRVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLL 128 (439)
T ss_dssp EEECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCC
T ss_pred EEEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCe
Q ss_pred eeEEe
Q 026789 120 LAINV 124 (233)
Q Consensus 120 ~~I~V 124 (233)
..+.|
T Consensus 129 G~liV 133 (439)
T 2xu9_A 129 GALVV 133 (439)
T ss_dssp EEEEE
T ss_pred EEEEE
No 92
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=33.90 E-value=38 Score=29.21 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCCC--------ceEEEEcCCCCCcCCCCCCCCcCCCCCceEEeccC-------------CCeeEec
Q 026789 50 QTFTVGDTLVFNFAAGN--------HDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTAS-------------GPHYFIC 108 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~~--------H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~-------------G~~yFic 108 (233)
+++++||+|++++.+.. |.+..-...+=.. ....++.--.+=.++++++.+ |++||-|
T Consensus 44 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~ 122 (313)
T 3tas_A 44 IELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHD 122 (313)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEEC
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCCcCCccCCCCc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEee
Q ss_pred CCCCCCC------CCCeeeEEecCCCC
Q 026789 109 SFPGHCL------GGQKLAINVSARGS 129 (233)
Q Consensus 109 ~~~~hC~------~Gmk~~I~V~~~~a 129 (233)
-+..+=+ .||...|.|.....
T Consensus 123 h~~~~~~~~~~~~~Gl~G~liV~~~~~ 149 (313)
T 3tas_A 123 HVVGTEHGTGGIRNGLYGPVIVRRKGD 149 (313)
T ss_dssp SSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred cCcccccchhhhhccccCceEeecccc
No 93
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=33.16 E-value=17 Score=28.31 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=17.4
Q ss_pred cCeeeeeCCEEEEEecCCCceEEEE
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTRV 72 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~V 72 (233)
..+.+++||.++|++.....-+.+|
T Consensus 113 ~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 113 LENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHcCCCCCCEEEEEEecCCceEEEE
Confidence 3567889999999998643224444
No 94
>1whl_A Cylindromatosis tumor suppressor CYLD; deubiquitinating enzyme, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=30.88 E-value=66 Score=23.22 Aligned_cols=15 Identities=13% Similarity=0.233 Sum_probs=11.8
Q ss_pred eeeeeCCEEEEEecC
Q 026789 50 QTFTVGDTLVFNFAA 64 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~ 64 (233)
..++|||.+......
T Consensus 6 ~~~~VG~rV~V~~~~ 20 (95)
T 1whl_A 6 SGIDVGCPVKVQLRS 20 (95)
T ss_dssp CCCCSSCEEEEECSS
T ss_pred ccCcCCCEEEEecCC
Confidence 568999999987544
No 95
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=30.16 E-value=66 Score=27.56 Aligned_cols=80 Identities=19% Similarity=0.103 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCCC--------ceEEEEcCCCCCcCCCCCCCCcCCCCCceEEec-------------cCCCeeEec
Q 026789 50 QTFTVGDTLVFNFAAGN--------HDVTRVTQSSFNACNTTSPLSRTTNSPASVTLT-------------ASGPHYFIC 108 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~~--------H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~-------------~~G~~yFic 108 (233)
+++++||+|++++.+.. |.+..-...+-.. ....++.--.+-.+++++. ..|++||-|
T Consensus 60 i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~ 138 (299)
T 3t9w_A 60 LEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVNSDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHD 138 (299)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEEC
T ss_pred EEEECCeEEEEEEEECCCCCccEEeCCcccCCccCCCc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEec
Q ss_pred CCCCCCCC------CCeeeEEecCCCCC
Q 026789 109 SFPGHCLG------GQKLAINVSARGSS 130 (233)
Q Consensus 109 ~~~~hC~~------Gmk~~I~V~~~~a~ 130 (233)
-..+.=.. ||...+.|......
T Consensus 139 H~~~~~~~~~~~~~GL~G~liV~~~~~~ 166 (299)
T 3t9w_A 139 HAMGTEHGTEGVLKGLYGALVVRRQGDL 166 (299)
T ss_dssp SSSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred CCcccccchhhhcccccceEEEeccccc
No 96
>3nb3_A Outer membrane protein A; virus assembly, cementing protein, bacteriophage, SF6, shige beta-barrel, icosahedral, virus; 19.00A {Escherichia coli}
Probab=29.96 E-value=8.3 Score=33.35 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=6.9
Q ss_pred ChhHHHHHHHHHHHHhhhcccc---eEEEecCCCCCcc
Q 026789 1 MFNRFFLAAIAIAALVQSSTAQ---TRHVVGDALGWIV 35 (233)
Q Consensus 1 m~~~~~~~~~~~~~l~~~~~a~---~~~~VGg~~GW~~ 35 (233)
|+|.+++++++++++...+.|+ ....||+..||..
T Consensus 1 MKk~ll~~a~~~~~~~~~A~Aa~~~~~~yvg~~~G~~~ 38 (346)
T 3nb3_A 1 MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQ 38 (346)
T ss_dssp ---------------------CCCTTEEEEEEEEEEEC
T ss_pred CchhHHHHHHHHHHhhhhhhhccccCCceEEEeeeeee
Confidence 7765554444433332222222 2344776655543
No 97
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=29.26 E-value=60 Score=31.80 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=47.2
Q ss_pred CeeeeeCCEEEEEecCC-----CceEEEEcCCCCCcCC-CCCCCCcCCCCC--ceEEeccCCCeeEecCCCCCCCCCCee
Q 026789 49 NQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACN-TTSPLSRTTNSP--ASVTLTASGPHYFICSFPGHCLGGQKL 120 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~-----~H~V~~V~~~~y~~C~-~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~~hC~~Gmk~ 120 (233)
..+++.||++.+.+-+. .|.+.. ..-.|.--. ..+.+.+...+. ..++.+.+|.+.|.|-+..|=..||..
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~~~~h~~hl-hGh~f~Vvg~~~Dtv~v~Pg~~~~v~~~~~~pG~w~~hCH~~~H~~~GM~~ 323 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTTPEVHSIFL-EGHTFLVRNHRQASLEISPITFLTAQTLLMDLGQFLLFCHISSHQHDGMEA 323 (742)
T ss_dssp CCEECSSSCEEEECCCCCSSSCCCCCCC-TTCCCEETTEECCSCCCCTTCCCEEEECCCSCSEECCCCCSSSSSTTSCCB
T ss_pred ceEEcCCCEEEEEEEeCCCCCcceEEEE-CCCEEEEEeEecceEEeCCCcEEEEEEEeCCCeeEEEEeCChhHHhCCCeE
Confidence 46789999999987542 233311 000110000 011122222222 345557899999999999999999999
Q ss_pred eEEecCCC
Q 026789 121 AINVSARG 128 (233)
Q Consensus 121 ~I~V~~~~ 128 (233)
.+.|....
T Consensus 324 ~~~V~~~~ 331 (742)
T 2r7e_A 324 YVKVDSCP 331 (742)
T ss_dssp CEEECCCC
T ss_pred EEEEecCC
Confidence 99987653
No 98
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=29.20 E-value=69 Score=27.39 Aligned_cols=26 Identities=8% Similarity=-0.004 Sum_probs=19.7
Q ss_pred CCeeEecCCCC--CCCCCCeeeEEecCC
Q 026789 102 GPHYFICSFPG--HCLGGQKLAINVSAR 127 (233)
Q Consensus 102 G~~yFic~~~~--hC~~Gmk~~I~V~~~ 127 (233)
|++||-|-... |-..||...+.|...
T Consensus 140 GT~wYHsH~~~~~q~~~GL~G~liV~~~ 167 (306)
T 1sdd_A 140 LTHIYYSYVNLVEDFNSGLIGPLLICKK 167 (306)
T ss_dssp EEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred eEEEEeccCCchhhhccCceEEEEEccC
Confidence 79999998654 556799888887654
No 99
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=28.65 E-value=32 Score=33.80 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=49.3
Q ss_pred eeeeeCCEEEEEecC-C----CceEEEEcCCCCCcC-CCCCCCCcCCCCC--ceEEeccCCCeeEecCCCCCCCCCCeee
Q 026789 50 QTFTVGDTLVFNFAA-G----NHDVTRVTQSSFNAC-NTTSPLSRTTNSP--ASVTLTASGPHYFICSFPGHCLGGQKLA 121 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~-~----~H~V~~V~~~~y~~C-~~~~~~~~~~~G~--~~v~l~~~G~~yFic~~~~hC~~Gmk~~ 121 (233)
.+++.||++.+.+-+ + .|.+..- .-.|.-- ...+.+.+..... ..++.+.+|.++|.|-+..|=..||...
T Consensus 628 l~v~~Ge~vr~rliN~g~~~~~h~~Hlh-Gh~f~v~~~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~ 706 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGAQTDFLSVFFS-GYTFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTAL 706 (742)
T ss_dssp CCCCSSCCCEEEEEECSSCCCCCCCEES-SSCCCCBSSSBCSSCCCCCSSEECCEECCCCCCSCCEECCCSTTHHHHSCC
T ss_pred EEEeCCCEEEEEEEeCCCCcceEEEEEc-CcEEEEeccceeEEEECCCcEEEEEEEcCCCeEEEEEeCCchHHhCCCeEE
Confidence 789999999997754 2 3555431 1122210 1112222322232 3456678999999999999999999998
Q ss_pred EEecCC
Q 026789 122 INVSAR 127 (233)
Q Consensus 122 I~V~~~ 127 (233)
+.|...
T Consensus 707 ~~V~~~ 712 (742)
T 2r7e_A 707 LKVSSC 712 (742)
T ss_dssp CCCCCC
T ss_pred EEEEeC
Confidence 888754
No 100
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=28.49 E-value=24 Score=30.65 Aligned_cols=34 Identities=9% Similarity=-0.022 Sum_probs=27.9
Q ss_pred eEEeccCCCeeEecCCCCCC-CCCCeeeEEecCCC
Q 026789 95 SVTLTASGPHYFICSFPGHC-LGGQKLAINVSARG 128 (233)
Q Consensus 95 ~v~l~~~G~~yFic~~~~hC-~~Gmk~~I~V~~~~ 128 (233)
.|+.+.+|.++|.|....|| ..||...+.+....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 45667889999999999998 78998888887543
No 101
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=26.54 E-value=14 Score=28.21 Aligned_cols=8 Identities=25% Similarity=0.401 Sum_probs=0.0
Q ss_pred ChhHHHHH
Q 026789 1 MFNRFFLA 8 (233)
Q Consensus 1 m~~~~~~~ 8 (233)
|.|+++++
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 88877665
No 102
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=26.49 E-value=29 Score=25.36 Aligned_cols=29 Identities=10% Similarity=0.197 Sum_probs=22.9
Q ss_pred EEEecCCCCCccCCCCCCCccccccCeeeeeCCEEEEE
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFN 61 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~L~F~ 61 (233)
..++||+.| ...++.|.+. |+.||+|.+.
T Consensus 41 ~~~l~DeTG-------~I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-------RIRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-------EEEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-------eEEEEEEcCc--cCCCCEEEEE
Confidence 467888865 3467889777 9999999997
No 103
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=26.48 E-value=37 Score=24.14 Aligned_cols=19 Identities=26% Similarity=0.483 Sum_probs=14.7
Q ss_pred cccCeeeeeCCEEEEEecC
Q 026789 46 WAANQTFTVGDTLVFNFAA 64 (233)
Q Consensus 46 Wa~~~~f~vGD~L~F~y~~ 64 (233)
.+.-..+++||.|.|.|..
T Consensus 56 ~~~l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 56 QTKMSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp TCEECCCCTTCEEEEEEEE
T ss_pred hhhhhcCCCCCEEEEEEEE
Confidence 3334568999999999974
No 104
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=25.31 E-value=16 Score=27.55 Aligned_cols=13 Identities=31% Similarity=0.621 Sum_probs=10.5
Q ss_pred eeeeeCCEEEEEe
Q 026789 50 QTFTVGDTLVFNF 62 (233)
Q Consensus 50 ~~f~vGD~L~F~y 62 (233)
+.+++||.|+|+-
T Consensus 33 ~~i~vGD~I~f~~ 45 (113)
T 1xne_A 33 KDIKRGDKIIFND 45 (113)
T ss_dssp TTCCTTCEEEETT
T ss_pred hccCCCCEEEEcc
Confidence 4579999999953
No 105
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=25.18 E-value=42 Score=25.43 Aligned_cols=44 Identities=14% Similarity=0.280 Sum_probs=32.0
Q ss_pred cceEEEecCC---CCCccCC---CCCC----CccccccCeeeeeCCEEEEEecC
Q 026789 21 AQTRHVVGDA---LGWIVPP---NGPA----TYSNWAANQTFTVGDTLVFNFAA 64 (233)
Q Consensus 21 a~~~~~VGg~---~GW~~~~---~~~~----~Y~~Wa~~~~f~vGD~L~F~y~~ 64 (233)
.+..++||+. ..|+..- .... .|..|.....+..|..|+|+|-.
T Consensus 22 ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 22 GEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp TCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 4568899983 3598631 1122 68889988999899999999953
No 106
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=24.59 E-value=16 Score=33.48 Aligned_cols=75 Identities=13% Similarity=0.101 Sum_probs=45.2
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEE----E-cCC-CCCcCCCCCCCCcCCCC--CceEEec-cCCCeeEecC----CC
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTR----V-TQS-SFNACNTTSPLSRTTNS--PASVTLT-ASGPHYFICS----FP 111 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~----V-~~~-~y~~C~~~~~~~~~~~G--~~~v~l~-~~G~~yFic~----~~ 111 (233)
-.++++.||.|+.++.+. .++|-- + +.. +...|- + ...+ ..++++. ..|++||-|- ..
T Consensus 38 P~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~----i--~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~ 111 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFA----I--TPGESYNYSFDVVNRAGTYLYHPHPHGLTA 111 (448)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGC----B--CTTCEEEEEEECCSCSEEEEEEECCTTTHH
T ss_pred ceEEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCcc----C--CCCCEEEEEEEcCCCCCceEeccCCCCchH
Confidence 357899999999988764 233321 1 100 011132 1 1122 2467777 7899999988 33
Q ss_pred CCCCCCCeeeEEecCCC
Q 026789 112 GHCLGGQKLAINVSARG 128 (233)
Q Consensus 112 ~hC~~Gmk~~I~V~~~~ 128 (233)
.|-..||...+.|....
T Consensus 112 ~q~~~Gl~G~liV~~~~ 128 (448)
T 3aw5_A 112 KQFYMGQLGLVIVEDSG 128 (448)
T ss_dssp HHHHTTCCEEEEEECTT
T ss_pred HHHhccceEEEEEeCCc
Confidence 45568998888887654
No 107
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=24.59 E-value=24 Score=26.45 Aligned_cols=11 Identities=27% Similarity=0.739 Sum_probs=9.9
Q ss_pred eeeeeCCEEEE
Q 026789 50 QTFTVGDTLVF 60 (233)
Q Consensus 50 ~~f~vGD~L~F 60 (233)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 56899999999
No 108
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=24.58 E-value=22 Score=35.08 Aligned_cols=29 Identities=7% Similarity=-0.051 Sum_probs=23.2
Q ss_pred cCCCeeEecCCCC--CCCCCCeeeEEecCCC
Q 026789 100 ASGPHYFICSFPG--HCLGGQKLAINVSARG 128 (233)
Q Consensus 100 ~~G~~yFic~~~~--hC~~Gmk~~I~V~~~~ 128 (233)
..|++||.|.+.. |...||...|.|....
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 5699999998865 6778999888887543
No 109
>1w0n_A Endo-1,4-beta-xylanase D; hydrolase, carbohydrate-binding module, carbohydrate binding, CBM36; 0.8A {Paenibacillus polymyxa} SCOP: b.18.1.28 PDB: 1ux7_A
Probab=24.24 E-value=93 Score=23.91 Aligned_cols=63 Identities=21% Similarity=0.421 Sum_probs=36.4
Q ss_pred eeCCEEEE--EecCCCceEEEEcCCCCCcCCCCCCCCcCCCCCceEEec----cCCCeeEecCCC-----C---CCCCCC
Q 026789 53 TVGDTLVF--NFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLT----ASGPHYFICSFP-----G---HCLGGQ 118 (233)
Q Consensus 53 ~vGD~L~F--~y~~~~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~----~~G~~yFic~~~-----~---hC~~Gm 118 (233)
.-||.+.| +|.++.|++-.. -|.. ++...+|.|. +.|.+||--+.+ . |-..-|
T Consensus 41 an~D~~~~~~nFa~~~~sfslR------gasn-------Nsn~A~VdLrigg~~~GTfy~~gt~P~v~t~nnv~~~tg~q 107 (131)
T 1w0n_A 41 ANADYVSYSQYFANSTHNISVR------GASS-------NAGTAKVDLVIGGVTVGSFNFTGKTPTVQTLSNITHATGDQ 107 (131)
T ss_dssp STTCEEEEEEEESSSEEEEEEE------EEES-------SSSEEEEEEEETTEEEEEEEEESSSCEEEEEEEEECCCEEE
T ss_pred ecCCEEEEEEEeccccceEEEE------eccC-------CCCceEEEEEeCCeeeEEEEeccccceeeeeccccccCCce
Confidence 35899998 466777888541 3432 2223344442 357777776653 2 323337
Q ss_pred eeeEEecCCC
Q 026789 119 KLAINVSARG 128 (233)
Q Consensus 119 k~~I~V~~~~ 128 (233)
++.+.|....
T Consensus 108 ~vel~vT~dn 117 (131)
T 1w0n_A 108 EIKLALTSDD 117 (131)
T ss_dssp EEEEEESCSS
T ss_pred EEEEEEECCC
Confidence 8888776543
No 110
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=23.34 E-value=27 Score=24.53 Aligned_cols=14 Identities=29% Similarity=0.444 Sum_probs=11.5
Q ss_pred cccCCcccCCceec
Q 026789 219 WARNNNFSVGDILG 232 (233)
Q Consensus 219 Wa~~~~F~vGD~L~ 232 (233)
-..+++|.+||.|.
T Consensus 24 ie~rN~f~~GD~iE 37 (89)
T 4he6_A 24 VQQRNHFRPGDEVE 37 (89)
T ss_dssp EEESSCBCTTCEEE
T ss_pred EEEcCCcCCCCEEE
Confidence 35689999999984
No 111
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=23.01 E-value=35 Score=31.68 Aligned_cols=79 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCC--------CceEEEEcCCCCCcCCCCCCCCcCCCCCceEEecc--CCCeeEecCC----CCCCC
Q 026789 50 QTFTVGDTLVFNFAAG--------NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTA--SGPHYFICSF----PGHCL 115 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~--------~H~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~--~G~~yFic~~----~~hC~ 115 (233)
++++.||.|+.++.+. -|.+.+-+..|-.. ..++.-..+=.+.|++.. .|++||-|-. ..|=.
T Consensus 84 Ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~ 160 (481)
T 3zx1_A 84 IEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVF 160 (481)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCCGGGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHH
T ss_pred EEEECCcEEEEEEEeCCCCCeeEEecCcccCCccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhh
Q ss_pred CCCeeeEEecCCCCCC
Q 026789 116 GGQKLAINVSARGSSP 131 (233)
Q Consensus 116 ~Gmk~~I~V~~~~a~P 131 (233)
.||...+.|.......
T Consensus 161 ~GL~G~lIV~~~~~~~ 176 (481)
T 3zx1_A 161 MGLAGAFVIKAKKDAL 176 (481)
T ss_dssp TTCCEEEEEECSSCTT
T ss_pred ccceEEEEEcCccccc
No 112
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=22.99 E-value=58 Score=22.27 Aligned_cols=23 Identities=17% Similarity=0.323 Sum_probs=18.7
Q ss_pred CeeeeeCCEEEEEecCCCceEEEE
Q 026789 49 NQTFTVGDTLVFNFAAGNHDVTRV 72 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~~H~V~~V 72 (233)
..+|++||+|.=+| +|.+..+++
T Consensus 7 ~~~~~vgd~VmaRW-~Gd~~yYpa 29 (66)
T 2l8d_A 7 NRKYADGEVVMGRW-PGSVLYYEV 29 (66)
T ss_dssp SSSSCSSCEEEEEC-TTSSCEEEE
T ss_pred ceEeecCCEEEEEc-CCCccceEE
Confidence 46789999999999 777777665
No 113
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=22.90 E-value=42 Score=23.42 Aligned_cols=16 Identities=31% Similarity=0.625 Sum_probs=13.4
Q ss_pred CeeeeeCCEEEEEecC
Q 026789 49 NQTFTVGDTLVFNFAA 64 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~ 64 (233)
-..+++||.|.|.|..
T Consensus 51 l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp ECCCCTTCEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEE
Confidence 3568999999999974
No 114
>1ixd_A Cylindromatosis tumour-suppressor CYLD; structural genomics, riken structural genomics/proteomics initiative, RSGI, antitumor protein; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=22.67 E-value=89 Score=23.06 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=15.0
Q ss_pred cCeeeeeCCEEEEEecCCCceEEE
Q 026789 48 ANQTFTVGDTLVFNFAAGNHDVTR 71 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~~H~V~~ 71 (233)
....++|||.+...-.....-+++
T Consensus 14 ~~~~l~VG~RV~V~~~~~~~GtVr 37 (104)
T 1ixd_A 14 NSHGLEVGSLAEVKENPPFYGVIR 37 (104)
T ss_dssp SSSCCCTTSEEEECSSSCCCEEEE
T ss_pred CCcccccCCEEEECcCCCcEEEEE
Confidence 356799999998863322333443
No 115
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=22.37 E-value=35 Score=26.35 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=14.4
Q ss_pred eCCEEEEEecCCCceEEEEc
Q 026789 54 VGDTLVFNFAAGNHDVTRVT 73 (233)
Q Consensus 54 vGD~L~F~y~~~~H~V~~V~ 73 (233)
-|+.|.|.-.++.++-+..+
T Consensus 77 ~gK~V~~~S~AgY~S~V~y~ 96 (126)
T 4dny_A 77 EGKMVRFVSSAGYSSTVFYG 96 (126)
T ss_dssp TTCEEEEEEECSSCEEEEET
T ss_pred CCCEEEEEEecCccEEEEEC
Confidence 67788887777777776653
No 116
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=22.31 E-value=1.1 Score=24.85 Aligned_cols=19 Identities=37% Similarity=0.739 Sum_probs=13.7
Q ss_pred CeeeeeCCEEEEEecCCCc
Q 026789 49 NQTFTVGDTLVFNFAAGNH 67 (233)
Q Consensus 49 ~~~f~vGD~L~F~y~~~~H 67 (233)
++.|.|.|.|.|.|....|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 4678999999999876544
No 117
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=21.44 E-value=50 Score=24.12 Aligned_cols=32 Identities=16% Similarity=0.408 Sum_probs=23.1
Q ss_pred EEEecCCCCCccCCCCCCCccccc--cCeeeeeCCEEEEEe
Q 026789 24 RHVVGDALGWIVPPNGPATYSNWA--ANQTFTVGDTLVFNF 62 (233)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~Y~~Wa--~~~~f~vGD~L~F~y 62 (233)
..++||+.| ...++.|. ....|+.||+|.++.
T Consensus 38 ~~~l~DeTG-------~I~~t~W~~~~~~~~~~G~~V~i~n 71 (109)
T 2kbn_A 38 VGLLGDETG-------IIKFTIWKNAELPLLEQGESYLLRS 71 (109)
T ss_dssp EEEEECTTC-------CEEEEEEGGGCCCCCCTTCEEEEEE
T ss_pred EEEEECCCC-------eEEEEEECcccccccCCCCEEEEEE
Confidence 356788765 34678887 234789999999873
No 118
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=21.17 E-value=30 Score=25.10 Aligned_cols=43 Identities=21% Similarity=0.516 Sum_probs=29.1
Q ss_pred cceEEEecCC--C-CCccCC---CCCCCc----cccccCeeeeeCCEEEEEec
Q 026789 21 AQTRHVVGDA--L-GWIVPP---NGPATY----SNWAANQTFTVGDTLVFNFA 63 (233)
Q Consensus 21 a~~~~~VGg~--~-GW~~~~---~~~~~Y----~~Wa~~~~f~vGD~L~F~y~ 63 (233)
.+..++||+. . .|+... .....| ..|.....+..|..|+|+|-
T Consensus 20 Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~ 72 (108)
T 1ac0_A 20 GENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFI 72 (108)
T ss_dssp SCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCE
T ss_pred CCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEE
Confidence 3557888973 3 498631 122333 67988888888888888885
No 119
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=21.04 E-value=37 Score=23.88 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=17.8
Q ss_pred cCeeeeeCCEEEEEecCC---CceEEEE
Q 026789 48 ANQTFTVGDTLVFNFAAG---NHDVTRV 72 (233)
Q Consensus 48 ~~~~f~vGD~L~F~y~~~---~H~V~~V 72 (233)
.-..+++||.|.|.+... ...|+++
T Consensus 44 ~l~~lk~Gd~V~F~~~~~~~g~~~it~i 71 (82)
T 2l55_A 44 LPQGLKAGDRVAFSFRLDPHGMATLVTV 71 (82)
T ss_dssp CCSSCSTTCEEEEEEEEETTTEEEEEEE
T ss_pred HhhcCCCCCEEEEEEEECCCCeEEEEEE
Confidence 346799999999999753 3445554
No 120
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=20.73 E-value=1.3e+02 Score=28.09 Aligned_cols=83 Identities=10% Similarity=-0.029 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCCC--------ceEEEE-cCCCCCcCCCCCCCCcCCCCCceEEecc-CCCeeEecCCCCCCC----
Q 026789 50 QTFTVGDTLVFNFAAGN--------HDVTRV-TQSSFNACNTTSPLSRTTNSPASVTLTA-SGPHYFICSFPGHCL---- 115 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~~--------H~V~~V-~~~~y~~C~~~~~~~~~~~G~~~v~l~~-~G~~yFic~~~~hC~---- 115 (233)
+.++.||.|+.++.+.. |.+.+- ...+...| ++.-..+=..+++++. .|++||-|-..++-.
T Consensus 71 I~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~----~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~ 146 (534)
T 3abg_A 71 FQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAED----ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAY 146 (534)
T ss_dssp EEEETTCCEEEEEEECSSSCBCEEEETCCCCTTTTTCSSS----CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHH
T ss_pred EEEeCCcEEEEEEEECCCCCceEEECCCcCCCCCCCCCCC----CCCCCCeEEEEEecCCcceeEEEecCccccchhhhh
Q ss_pred CCCeeeEEecCCCCCCCCCCC
Q 026789 116 GGQKLAINVSARGSSPAPQPS 136 (233)
Q Consensus 116 ~Gmk~~I~V~~~~a~P~P~p~ 136 (233)
.||...+.|......+..-|.
T Consensus 147 ~Gl~G~liV~~~~~~~~~lp~ 167 (534)
T 3abg_A 147 RGQAGLYMLTDPAEDALNLPS 167 (534)
T ss_dssp TBCEEEEEEECTTTTTSCTTC
T ss_pred hcceEEEEEECCcccccCCCc
No 121
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=20.68 E-value=71 Score=30.39 Aligned_cols=80 Identities=11% Similarity=0.121 Sum_probs=0.0
Q ss_pred eeeeeCCEEEEEecCC--------CceEEEEcCCCCCcCCC--------CCCCCcCCCCCceEEecc------CC----C
Q 026789 50 QTFTVGDTLVFNFAAG--------NHDVTRVTQSSFNACNT--------TSPLSRTTNSPASVTLTA------SG----P 103 (233)
Q Consensus 50 ~~f~vGD~L~F~y~~~--------~H~V~~V~~~~y~~C~~--------~~~~~~~~~G~~~v~l~~------~G----~ 103 (233)
+++++||+|++++.+. -|.+.+-...+-..-.. ..++.-..+=...++++. +| +
T Consensus 71 I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T 150 (647)
T 1sdd_B 71 IRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRA 150 (647)
T ss_dssp EEEETTCEEEEEECCCSSSCBCCEEETCC---------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEE
T ss_pred EEEeCCCEEEEEEEECCCCceEEecCcceeCCCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceE
Q ss_pred eeEecCC--CCCCCCCCeeeEEecCCCC
Q 026789 104 HYFICSF--PGHCLGGQKLAINVSARGS 129 (233)
Q Consensus 104 ~yFic~~--~~hC~~Gmk~~I~V~~~~a 129 (233)
+||-|-. ..|-..||...+.|.....
T Consensus 151 ~wYHsH~~~~~q~~~GL~G~lIV~~~~~ 178 (647)
T 1sdd_B 151 WAYYSAVNPEKDIHSGLIGPLLICRKGT 178 (647)
T ss_dssp EEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred EEEccCCCCcccccccCccCEEEeeCCC
No 122
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=20.58 E-value=44 Score=30.07 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=27.9
Q ss_pred eEEeccCCCeeEecCCCCCC-CCCCeeeEEecCCC
Q 026789 95 SVTLTASGPHYFICSFPGHC-LGGQKLAINVSARG 128 (233)
Q Consensus 95 ~v~l~~~G~~yFic~~~~hC-~~Gmk~~I~V~~~~ 128 (233)
.|+++++|.|+|.|....|+ ..||...+.|....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 46678889999999988887 78998888887554
No 123
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=20.10 E-value=54 Score=24.23 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=25.1
Q ss_pred CCCccCCC---CCCCccccc-cCeeeeeCCEEEEEecCC
Q 026789 31 LGWIVPPN---GPATYSNWA-ANQTFTVGDTLVFNFAAG 65 (233)
Q Consensus 31 ~GW~~~~~---~~~~Y~~Wa-~~~~f~vGD~L~F~y~~~ 65 (233)
..|+..+. ....|+.|. ..+.+..|+.|.|.|..+
T Consensus 27 g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~dG 65 (104)
T 2laa_A 27 GSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFNDG 65 (104)
T ss_dssp SCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEECS
T ss_pred CCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEeCC
Confidence 46988653 245578895 667777789999999643
Done!