Your job contains 1 sequence.
>026790
MAANTFSFPANLLRYSQSFDAKRSSAPSFLPSSSMFGNKLLIRPQLNSSRFVTKYHRSSA
TATVSFSLPTTVKPETASPDKIPKWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVE
GTSTTAKFLRANGITLFKVREETLNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKS
GESGEITTNHLLLGIWSEKESAGHKILATLGFNDEKAKEIAKSINEDTILSFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026790
(233 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2138048 - symbol:AT4G25370 "AT4G25370" species... 635 3.8e-62 1
TAIR|locus:2118066 - symbol:AT4G12060 "AT4G12060" species... 553 1.9e-53 1
UNIPROTKB|Q3A9N1 - symbol:CHY_2348 "Negative regulator of... 197 1.6e-14 1
TIGR_CMR|CHY_2348 - symbol:CHY_2348 "negative regulator o... 197 1.6e-14 1
TAIR|locus:2157383 - symbol:CLPC1 "CLPC homologue 1" spec... 180 1.3e-12 1
TAIR|locus:2099433 - symbol:HSP93-III species:3702 "Arabi... 176 3.5e-12 1
UNIPROTKB|Q724I0 - symbol:LMOf2365_0244 "ClpC ATPase" spe... 169 1.6e-11 1
UNIPROTKB|P0A522 - symbol:clpC "Probable ATP-dependent Cl... 164 5.8e-11 1
UNIPROTKB|Q81VV9 - symbol:BAS0081 "Negative regulator of ... 159 1.1e-09 1
TIGR_CMR|BA_0080 - symbol:BA_0080 "negative regulator of ... 159 1.1e-09 1
TIGR_CMR|DET_0057 - symbol:DET_0057 "ATP-dependent Clp pr... 156 4.0e-09 1
TAIR|locus:2085592 - symbol:AT3G45450 species:3702 "Arabi... 114 0.00023 1
>TAIR|locus:2138048 [details] [associations]
symbol:AT4G25370 "AT4G25370" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0019538 "protein metabolic
process" evidence=IEA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR004176 Pfam:PF02861 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941 GO:GO:0009579
GO:GO:0019538 eggNOG:COG0542 HOGENOM:HOG000006326
ProtClustDB:CLSN2689402 Gene3D:1.10.1780.10 InterPro:IPR023150
EMBL:AY035135 EMBL:AY059070 EMBL:AY086824 IPI:IPI00526265
RefSeq:NP_567718.1 UniGene:At.21146 ProteinModelPortal:Q93WL3
SMR:Q93WL3 IntAct:Q93WL3 STRING:Q93WL3 PaxDb:Q93WL3 PRIDE:Q93WL3
EnsemblPlants:AT4G25370.1 GeneID:828640 KEGG:ath:AT4G25370
TAIR:At4g25370 InParanoid:Q93WL3 OMA:GTEAILM PhylomeDB:Q93WL3
Genevestigator:Q93WL3 Uniprot:Q93WL3
Length = 238
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 135/237 (56%), Positives = 168/237 (70%)
Query: 1 MAANTFSFPANLLRYSQSFDAKRXXXXXXXX----XXXMFGNKLLIRPQLNSSRFVTKYH 56
MA+ T SF L + F +++ + G KLL Q + FV K
Sbjct: 1 MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLAT-QPSHRCFVPKLR 59
Query: 57 RSSATATVSFSLPTTVKPETASPDKIPKWSARAIRSFAMAELEARKLKYPNTGTEAFLMG 116
++ +TV ++P +PE S DKIPKWSARAI+S AM ELEARKLKYP+TGTEA LMG
Sbjct: 60 CLTSASTV-LNVPIA-QPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMG 117
Query: 117 ILVEGTSTTAKFLRANGITLFKVREETLNLLGKSDLFFFSPERPPLTEQAQRALDWAFNE 176
ILVEGTST AKFLR NG+TLFKVR+ETL+LLGKSD++FFSPE PPLTE AQ+A+ WA +E
Sbjct: 118 ILVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDE 177
Query: 177 KLKSGESGEITTNHLLLGIWSEKESAGHKILATLGFNDEKAKEIAKSINEDTILSFK 233
K KS GE+TT +LLLG+WS+K+SAG +IL LGFN++KAKE+ KS+NED LSFK
Sbjct: 178 KNKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234
>TAIR|locus:2118066 [details] [associations]
symbol:AT4G12060 "AT4G12060" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0019538 "protein metabolic
process" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0043424 "protein
histidine kinase binding" evidence=IPI] [GO:0006569 "tryptophan
catabolic process" evidence=RCA] [GO:0009684 "indoleacetic acid
biosynthetic process" evidence=RCA] InterPro:IPR004176 Pfam:PF02861
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941
GO:GO:0019538 EMBL:AL049638 EMBL:AL161533 EMBL:AK119030
EMBL:AY087178 IPI:IPI00530058 PIR:T06613 RefSeq:NP_567386.1
UniGene:At.43268 ProteinModelPortal:Q8GW78 SMR:Q8GW78 IntAct:Q8GW78
STRING:Q8GW78 PaxDb:Q8GW78 PRIDE:Q8GW78 ProMEX:Q8GW78
EnsemblPlants:AT4G12060.1 GeneID:826814 KEGG:ath:AT4G12060
GeneFarm:2777 TAIR:At4g12060 eggNOG:COG0542 HOGENOM:HOG000006326
OMA:WSDKESA PhylomeDB:Q8GW78 ProtClustDB:CLSN2689402
Genevestigator:Q8GW78 Gene3D:1.10.1780.10 InterPro:IPR023150
Uniprot:Q8GW78
Length = 241
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 111/164 (67%), Positives = 127/164 (77%)
Query: 67 SLPTTVKPETASPDKIPKWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTA 126
SLPT S K PKWS RAI+SFAM ELEARKLKYPNTGTEA LMGIL+EGTS T+
Sbjct: 76 SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTS 135
Query: 127 KFLRANGITLFKVREETLNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEI 186
KFLRAN I L+KVREET+ LLGK+D++FFSPE PPLTE AQRALD A ++ LK+G GE+
Sbjct: 136 KFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEV 195
Query: 187 TTNHLLLGIWSEKESAGHKILATLGFNDEKAKEIAKSINEDTIL 230
H+LLGIWSE ES GHKILATLGF DEK+KE+ +E L
Sbjct: 196 MPAHILLGIWSEVESPGHKILATLGFTDEKSKELESFASESGFL 239
>UNIPROTKB|Q3A9N1 [details] [associations]
symbol:CHY_2348 "Negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 197 (74.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 52/143 (36%), Positives = 80/143 (55%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
K++ RA + MA+ EARK+ YP TE L+GI+ EG S AK L GI KVRE+
Sbjct: 4 KFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKI 63
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
L L+G + P T +A+R L+ + +E + G + + T HLLLG+ E E
Sbjct: 64 LELVGPGEGPM--PAEIAFTPRAKRVLELSVDEAARFGHN-YVGTEHLLLGLIREGEGVA 120
Query: 204 HKILATLGFNDEKAK-EIAKSIN 225
++L +LG + E+ + EI + ++
Sbjct: 121 ARVLVSLGADLERVRAEITQVLS 143
>TIGR_CMR|CHY_2348 [details] [associations]
symbol:CHY_2348 "negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 197 (74.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 52/143 (36%), Positives = 80/143 (55%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
K++ RA + MA+ EARK+ YP TE L+GI+ EG S AK L GI KVRE+
Sbjct: 4 KFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKI 63
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
L L+G + P T +A+R L+ + +E + G + + T HLLLG+ E E
Sbjct: 64 LELVGPGEGPM--PAEIAFTPRAKRVLELSVDEAARFGHN-YVGTEHLLLGLIREGEGVA 120
Query: 204 HKILATLGFNDEKAK-EIAKSIN 225
++L +LG + E+ + EI + ++
Sbjct: 121 ARVLVSLGADLERVRAEITQVLS 143
>TAIR|locus:2157383 [details] [associations]
symbol:CLPC1 "CLPC homologue 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0031897 "Tic complex" evidence=TAS] [GO:0045037 "protein import
into chloroplast stroma" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IMP] [GO:0045036 "protein targeting to chloroplast"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IDA] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GO:GO:0005618 GO:GO:0009570
GO:GO:0009658 GO:GO:0010380 GO:GO:0009535 GO:GO:0019538
EMBL:AB017063 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 HSSP:P03815 EMBL:AF022909 EMBL:AY102125 EMBL:AK227173
IPI:IPI00535976 PIR:T52292 RefSeq:NP_568746.1 UniGene:At.24774
UniGene:At.74761 UniGene:At.74764 UniGene:At.75059
ProteinModelPortal:Q9FI56 SMR:Q9FI56 IntAct:Q9FI56 STRING:Q9FI56
PRIDE:Q9FI56 EnsemblPlants:AT5G50920.1 GeneID:835165
KEGG:ath:AT5G50920 GeneFarm:797 TAIR:At5g50920 InParanoid:Q9FI56
KO:K03696 OMA:FHQLTRD PhylomeDB:Q9FI56 ProtClustDB:CLSN2689981
Genevestigator:Q9FI56 GO:GO:0031897 GO:GO:0045037 Uniprot:Q9FI56
Length = 929
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ +AI+ +A+ EAR+L + GTE L+G++ EGT AK L++ GI L R E
Sbjct: 97 RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
++G+ F + E P T +A+R L+ + E + G + I + HLLLG+ E E
Sbjct: 157 EKIIGRGS-GFVAVEIP-FTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 213
Query: 204 HKILATLGFNDEKAK-EIAKSINED 227
++L LG + + ++ + + E+
Sbjct: 214 ARVLENLGADPSNIRTQVIRMVGEN 238
>TAIR|locus:2099433 [details] [associations]
symbol:HSP93-III species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=ISS] [GO:0045037 "protein
import into chloroplast stroma" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0034214 "protein hexamerization"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GO:GO:0042803 GO:GO:0016020
GO:GO:0009941 GO:GO:0016887 GO:GO:0009658 GO:GO:0019538
EMBL:AL132963 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HSSP:P03815 KO:K03696 ProtClustDB:CLSN2689981 GO:GO:0045037
EMBL:AB022324 EMBL:AY056787 IPI:IPI00535199 PIR:T49283 PIR:T52456
RefSeq:NP_566912.2 UniGene:At.23421 ProteinModelPortal:Q9SXJ7
SMR:Q9SXJ7 IntAct:Q9SXJ7 STRING:Q9SXJ7 PRIDE:Q9SXJ7
EnsemblPlants:AT3G48870.1 GeneID:824048 KEGG:ath:AT3G48870
GeneFarm:2764 TAIR:At3g48870 InParanoid:Q9SXJ7 OMA:QTIHYTP
PhylomeDB:Q9SXJ7 Genevestigator:Q9SXJ7 GO:GO:0034214 Uniprot:Q9SXJ7
Length = 952
Score = 176 (67.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 52/176 (29%), Positives = 91/176 (51%)
Query: 57 RSSATATVSFSLPTTVKPETAS---PDKI-PKWSARAIRSFAMAELEARKLKYPNTGTEA 112
R S V + L + E AS P + +++ +AI+ +++ EAR+L + GTE
Sbjct: 86 RPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQ 145
Query: 113 FLMGILVEGTSTTAKFLRANGITLFKVREETLNLLGKSDLFFFSPERPPLTEQAQRALDW 172
L+G++ EGT AK L++ GI L R E ++G+ F + E P T +A+R L+
Sbjct: 146 ILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGS-GFVAVEIP-FTPRAKRVLEL 203
Query: 173 AFNEKLKSGESGEITTNHLLLGIWSEKESAGHKILATLGFNDEKAK-EIAKSINED 227
+ E + G + I + HLLLG+ E E ++L LG + + ++ + + E+
Sbjct: 204 SLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN 258
>UNIPROTKB|Q724I0 [details] [associations]
symbol:LMOf2365_0244 "ClpC ATPase" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0006950 "response to stress"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IMP]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0016887 EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0019538
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 OMA:QTIHYTP RefSeq:YP_012854.1 ProteinModelPortal:Q724I0
SMR:Q724I0 STRING:Q724I0 GeneID:2799882 KEGG:lmf:LMOf2365_0244
PATRIC:20321701 ProtClustDB:CLSK2753149 Uniprot:Q724I0
Length = 820
Score = 169 (64.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/136 (30%), Positives = 77/136 (56%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ RA + A+++ EA +L + N GTE L+G++ EG AK L GI+ KV++E
Sbjct: 5 RFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEV 64
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
L+G + + + P +A++ ++ + +E K G + + T H+LLG+ E E
Sbjct: 65 EGLIGHGEKAVTTIQYTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVA 120
Query: 204 HKILATLGFNDEKAKE 219
++L+ LG + KA++
Sbjct: 121 ARVLSNLGISLNKARQ 136
>UNIPROTKB|P0A522 [details] [associations]
symbol:clpC "Probable ATP-dependent Clp protease
ATP-binding subunit" species:1773 "Mycobacterium tuberculosis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006457 "protein folding" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0044183 "protein binding involved in protein
folding" evidence=IMP] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS50151 SMART:SM00382 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0016887 GO:GO:0044183 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:FHQLTRD PIR:E70954
RefSeq:NP_338246.1 RefSeq:YP_006517086.1 RefSeq:YP_177995.1
ProteinModelPortal:P0A522 SMR:P0A522 IntAct:P0A522 PRIDE:P0A522
EnsemblBacteria:EBMYCT00000002289 EnsemblBacteria:EBMYCT00000069514
GeneID:13317205 GeneID:885104 GeneID:922793 KEGG:mtc:MT3703
KEGG:mtu:Rv3596c KEGG:mtv:RVBD_3596c PATRIC:18129893
TubercuList:Rv3596c ProtClustDB:CLSK2391256 Uniprot:P0A522
Length = 848
Score = 164 (62.8 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 43/129 (33%), Positives = 70/129 (54%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ RA R +A+ EAR L + GTE L+G++ EG AK L + GI+L VR +
Sbjct: 4 RFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQV 63
Query: 144 LNLLGKSDLFFFSPE-RPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESA 202
++G+ +P P T +A++ L+ + E L+ G + I T H+LLG+ E E
Sbjct: 64 EEIIGQGQQ---APSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGV 119
Query: 203 GHKILATLG 211
++L LG
Sbjct: 120 AAQVLVKLG 128
>UNIPROTKB|Q81VV9 [details] [associations]
symbol:BAS0081 "Negative regulator of genetic competence
ClpC/MecB" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/136 (30%), Positives = 77/136 (56%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ RA + A+++ EA ++ + N GTE L+G++ EG AK L A G++ KV++E
Sbjct: 5 RFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEV 64
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
L+G+ + + T +A++ ++ + +E K G S + T H+LLG+ E E
Sbjct: 65 EALIGRGTE---ASQTVHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVA 120
Query: 204 HKILATLGFNDEKAKE 219
++L LG + KA++
Sbjct: 121 ARVLNNLGVSLNKARQ 136
>TIGR_CMR|BA_0080 [details] [associations]
symbol:BA_0080 "negative regulator of genetic competence
ClpC/MecB" species:198094 "Bacillus anthracis str. Ames"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009294 "DNA
mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/136 (30%), Positives = 77/136 (56%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ RA + A+++ EA ++ + N GTE L+G++ EG AK L A G++ KV++E
Sbjct: 5 RFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEV 64
Query: 144 LNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKESAG 203
L+G+ + + T +A++ ++ + +E K G S + T H+LLG+ E E
Sbjct: 65 EALIGRGTE---ASQTVHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVA 120
Query: 204 HKILATLGFNDEKAKE 219
++L LG + KA++
Sbjct: 121 ARVLNNLGVSLNKARQ 136
>TIGR_CMR|DET_0057 [details] [associations]
symbol:DET_0057 "ATP-dependent Clp protease, ATP-binding
subunit ClpC" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 GO:GO:0008233
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 RefSeq:YP_180810.1 ProteinModelPortal:Q3ZAD9 SMR:Q3ZAD9
STRING:Q3ZAD9 GeneID:3229040 KEGG:det:DET0057 PATRIC:21607213
OMA:NYINTEH ProtClustDB:CLSK836766
BioCyc:DETH243164:GJNF-57-MONOMER Uniprot:Q3ZAD9
Length = 824
Score = 156 (60.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 81 KIPKWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVR 140
+ K+S RA R A+ EA+ L + GTE L+G++ E A+ L + L KVR
Sbjct: 4 RFDKFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVR 63
Query: 141 EETLNLLGKSDLFFFSPERPPLTEQAQRALDWAFNEKLKSGESGEITTNHLLLGIWSEKE 200
+LG+ + + LT +A++ ++ +E G + I T HLLLG+ E E
Sbjct: 64 SAVEFILGRGE--HPATSETGLTSRAKKVIELGIDEARNLGHN-YIGTEHLLLGLLREGE 120
Query: 201 SAGHKILATLGFNDEKAK-EIAKSINE 226
A +L + G EK + E+ + +N+
Sbjct: 121 GAAAGVLESFGVTVEKVRTEVGRILNQ 147
>TAIR|locus:2085592 [details] [associations]
symbol:AT3G45450 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003959
InterPro:IPR004176 Pfam:PF00004 Pfam:PF02861 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009941
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218211 HSSP:P03815 KO:K03696 EMBL:AL138657
IPI:IPI00545666 PIR:T47485 RefSeq:NP_190131.1 UniGene:At.53754
ProteinModelPortal:Q9M1G2 SMR:Q9M1G2 PaxDb:Q9M1G2 PRIDE:Q9M1G2
EnsemblPlants:AT3G45450.1 GeneID:823685 KEGG:ath:AT3G45450
TAIR:At3g45450 InParanoid:Q9M1G2 OMA:EAIQITT PhylomeDB:Q9M1G2
ProtClustDB:CLSN2915415 Genevestigator:Q9M1G2 Uniprot:Q9M1G2
Length = 341
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 84 KWSARAIRSFAMAELEARKLKYPNTGTEAFLMGILVEGTSTTAKFLRANGITLFKVREET 143
+++ +AI+ +A+ EAR+L Y GTE L+ ++ EGT AK L++ GI L R E
Sbjct: 4 RFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEV 63
Query: 144 LNLLGKSDLF 153
++G+ F
Sbjct: 64 EKIIGRGSGF 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 233 222 0.00096 112 3 11 22 0.40 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 579 (62 KB)
Total size of DFA: 159 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.52u 0.12s 18.64t Elapsed: 00:00:00
Total cpu time: 18.52u 0.12s 18.64t Elapsed: 00:00:00
Start: Sat May 11 05:53:50 2013 End: Sat May 11 05:53:50 2013