Query 026791
Match_columns 233
No_of_seqs 192 out of 797
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 12:45:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026791.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026791hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02314 pectinesterase 100.0 2.2E-44 4.7E-49 342.5 21.8 226 1-233 1-245 (586)
2 PLN02468 putative pectinestera 100.0 5.7E-42 1.2E-46 324.4 20.5 216 7-230 1-225 (565)
3 PLN02217 probable pectinestera 100.0 2.7E-40 5.7E-45 315.9 20.3 198 26-230 10-216 (670)
4 PLN02484 probable pectinestera 100.0 4.8E-40 1E-44 312.2 19.9 200 26-230 27-236 (587)
5 PLN02313 Pectinesterase/pectin 100.0 1.2E-39 2.5E-44 309.9 20.2 201 25-230 14-229 (587)
6 PLN02745 Putative pectinestera 100.0 6.4E-39 1.4E-43 304.7 17.5 217 7-231 3-241 (596)
7 PLN02990 Probable pectinestera 100.0 2.1E-38 4.6E-43 300.3 19.3 194 28-230 9-218 (572)
8 PLN02197 pectinesterase 100.0 9.5E-38 2.1E-42 295.8 19.1 189 29-232 3-201 (588)
9 PLN02506 putative pectinestera 100.0 6.4E-32 1.4E-36 254.3 18.9 154 66-223 31-193 (537)
10 smart00856 PMEI Plant invertas 100.0 1.7E-31 3.7E-36 212.8 16.1 142 68-217 3-148 (148)
11 PLN02708 Probable pectinestera 100.0 1.4E-31 3E-36 253.3 17.7 148 67-222 42-196 (553)
12 PLN02301 pectinesterase/pectin 100.0 3.5E-31 7.7E-36 249.6 16.8 152 69-226 50-205 (548)
13 PLN02416 probable pectinestera 100.0 6.6E-31 1.4E-35 247.9 17.8 157 65-225 34-195 (541)
14 PLN02713 Probable pectinestera 100.0 4.3E-31 9.3E-36 250.3 16.5 153 66-225 29-195 (566)
15 PLN03043 Probable pectinestera 100.0 9.3E-31 2E-35 246.9 15.7 150 73-227 3-164 (538)
16 TIGR01614 PME_inhib pectineste 100.0 5.5E-30 1.2E-34 210.6 18.0 146 68-221 28-177 (178)
17 PLN02995 Probable pectinestera 100.0 6.6E-30 1.4E-34 241.0 18.1 151 70-225 35-194 (539)
18 PLN02698 Probable pectinestera 100.0 1.1E-29 2.3E-34 237.8 17.1 150 65-223 18-178 (497)
19 PF04043 PMEI: Plant invertase 100.0 4.3E-28 9.3E-33 193.4 15.0 144 68-217 3-152 (152)
20 PLN02933 Probable pectinestera 99.9 4.2E-25 9.1E-30 207.2 17.4 123 101-225 48-185 (530)
21 PLN02488 probable pectinestera 99.9 6.2E-24 1.4E-28 197.4 13.9 147 74-222 3-160 (509)
22 PLN02170 probable pectinestera 99.9 1E-23 2.2E-28 197.5 14.1 138 69-227 51-190 (529)
23 PLN02201 probable pectinestera 99.9 1.7E-22 3.6E-27 189.7 13.9 119 103-221 36-163 (520)
24 PLN02916 pectinesterase family 99.8 6.1E-18 1.3E-22 158.0 12.9 86 134-227 61-146 (502)
25 KOG1733 Mitochondrial import i 71.9 37 0.0008 25.0 8.0 29 130-158 58-86 (97)
26 PF07870 DUF1657: Protein of u 67.6 31 0.00067 22.3 6.0 39 115-153 5-47 (50)
27 PF08999 SP_C-Propep: Surfacta 55.4 16 0.00034 26.3 3.1 21 29-50 34-54 (93)
28 PF05478 Prominin: Prominin; 44.8 3.6E+02 0.0078 27.5 14.4 24 165-188 273-299 (806)
29 PF12729 4HB_MCP_1: Four helix 41.3 1.6E+02 0.0034 22.4 8.0 20 29-50 6-25 (181)
30 PF10858 DUF2659: Protein of u 36.2 74 0.0016 26.4 4.6 57 68-128 57-118 (220)
31 PRK07021 fliL flagellar basal 32.3 59 0.0013 26.1 3.5 21 26-47 13-33 (162)
32 PRK05696 fliL flagellar basal 31.0 38 0.00082 27.5 2.2 19 26-44 15-33 (170)
33 PRK11376 hlyE hemolysin E; Pro 28.1 86 0.0019 27.1 3.8 42 143-187 38-81 (303)
34 PRK09634 nusB transcription an 26.0 4.1E+02 0.0088 22.5 11.6 54 132-191 43-96 (207)
35 PF02953 zf-Tim10_DDP: Tim10/D 24.1 2.2E+02 0.0048 18.8 7.4 28 130-157 37-64 (66)
36 PF07423 DUF1510: Protein of u 24.0 66 0.0014 27.5 2.5 6 33-38 19-24 (217)
37 TIGR01495 ETRAMP Plasmodium ri 24.0 53 0.0011 23.8 1.6 13 27-39 47-59 (85)
38 PF01093 Clusterin: Clusterin; 23.6 3E+02 0.0066 26.1 6.9 56 134-190 42-106 (436)
39 PRK07718 fliL flagellar basal 23.5 1.3E+02 0.0028 23.6 3.9 9 28-37 2-10 (142)
40 PF03487 IL13: Interleukin-13; 21.5 1.1E+02 0.0024 19.0 2.4 17 173-191 3-19 (43)
41 PRK11677 hypothetical protein; 21.3 85 0.0018 24.7 2.4 14 38-51 7-20 (134)
42 TIGR00847 ccoS cytochrome oxid 21.1 1.2E+02 0.0027 19.7 2.8 24 33-56 6-29 (51)
43 PF10749 DUF2534: Protein of u 20.5 1.2E+02 0.0026 21.9 2.8 14 26-40 10-23 (85)
44 PF03100 CcmE: CcmE; InterPro 20.4 39 0.00084 26.3 0.3 6 26-31 3-8 (131)
No 1
>PLN02314 pectinesterase
Probab=100.00 E-value=2.2e-44 Score=342.45 Aligned_cols=226 Identities=40% Similarity=0.684 Sum_probs=187.7
Q ss_pred CcccccccCCCCCchhhhhhccccccccchhhHHHHHHHHHHHHHHHHHhheeeecCCCcccc-cc---cchhHHHHccC
Q 026791 1 MDAINVMKGYDKVDHLQNRAGIHSLRTHQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQ-QR---LDAAESIKTVC 76 (233)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~i~~~C 76 (233)
||+|+++|+|++.++..++.. .++++||+ +|++++++|||++++++++++..|.+++.++ .+ ...+..|+.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~l~v~~vi~~v~~~~~~~~~~~~~~~~~~~~~~~~~Iks~C 77 (586)
T PLN02314 1 MDSINSFKGYGKVDEAEEQAF--RRKTRKRL-IIIVVSVVVLVAIIIGAVVGTVVHKRKNESNPSPPPELTPATSLKAVC 77 (586)
T ss_pred CcchhhhcccCCccchhhhhh--hhccccee-hHHHHHHHHHHHHHHhheeEEeccccCCCCCCCCccccCHHHHHHHhc
Confidence 899999999999877422222 22347788 9999999999999999998887765443221 11 22456999999
Q ss_pred CCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHHHHHHHH
Q 026791 77 SVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQLRDASSRL 152 (233)
Q Consensus 77 ~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~~~a~d~L 152 (233)
+.|+||++|+++|++.|.+ ...+|++|++++++++++++.++...++++ .+++.+.||+||+|+|++++|+|
T Consensus 78 ~~T~YP~lC~sSLs~~p~s----~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~~~~~~~k~AL~DC~EllddAid~L 153 (586)
T PLN02314 78 SVTRYPESCISSISSLPTS----NTTDPETLFKLSLKVAIDELSKLSDLPQKLINETNDERLKSALRVCETLFDDAIDRL 153 (586)
T ss_pred cCCCChHHHHHHHhcccCc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 567999999999999999999999888877 57899999999999999999999
Q ss_pred HHhHHhhhh--c---ccccChhhHHHHHHHHhccHHHHHHhhhhc------CcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026791 153 NDSMSELNA--T---LTDRTVNDIQTWISAAMTDEETCLDGLEEM------GSTVADEVKTMMKKSKELLSYSLAIIANI 221 (233)
Q Consensus 153 ~~s~~~~~~--~---~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~------~~~~~~~l~~~~~~~~~L~SNaLAiv~~~ 221 (233)
++++.+++. . +....++|++||||||||||+||+|||++. ++.+++.|...+.++.||+||+|||++++
T Consensus 154 ~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaLAIi~~l 233 (586)
T PLN02314 154 NDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSLAIVSKI 233 (586)
T ss_pred HHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999987421 0 114578999999999999999999999864 34578889999999999999999999999
Q ss_pred HhhhhhcCCCCC
Q 026791 222 RTLLQKFGLHMH 233 (233)
Q Consensus 222 ~~~~~~~~~~~~ 233 (233)
...+.+|+++.|
T Consensus 234 ~~~~~~~~~~~~ 245 (586)
T PLN02314 234 LGILSDLGIPIH 245 (586)
T ss_pred cccccccccccc
Confidence 998888876543
No 2
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.7e-42 Score=324.45 Aligned_cols=216 Identities=30% Similarity=0.487 Sum_probs=176.1
Q ss_pred ccCCCCCchhhhhhccccccccchhhHHHHHHHHHHHHHHHHHhheeeecCCCcccc--cccchhHHHHccCCCCCChhc
Q 026791 7 MKGYDKVDHLQNRAGIHSLRTHQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQ--QRLDAAESIKTVCSVTQNPDS 84 (233)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~C~~T~yp~~ 84 (233)
||+|+|..++|+......++++||+ +|++++++|||++++++++++..+.+++.+. .....+..|+.+|+.|+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ik~~C~~T~Yp~l 79 (565)
T PLN02468 1 FKAYGKVDEAEQARLEARRKTRKRI-TIISLSSIILVAIVVAAVVGTTASSGNSEKTGNNGKSISTSVKAVCDVTLYKDS 79 (565)
T ss_pred CCcccccChhhccchhhhhhcccee-hHHHHHHHHHHHHHHhheEEEeccccCCCCCCccccchhHHHHHhccCCCChHH
Confidence 5789998875322111112336788 9999999999999999998877664332211 112245699999999999999
Q ss_pred hhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh------hchhhHHHHHHHHHHHHHHHHHHHHhHHh
Q 026791 85 CFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL------YGNHLEVALRDCVDQLRDASSRLNDSMSE 158 (233)
Q Consensus 85 C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l------~d~~~k~AL~dC~el~~~a~d~L~~s~~~ 158 (233)
|+++|++.|.+ ...+|++|++++++++++++.++...++++ .+++.+.||+||+|+|++++|+|++++.+
T Consensus 80 C~sSLs~~~~s----~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELlddaid~L~~Sl~~ 155 (565)
T PLN02468 80 CYETLAPAPKA----SQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELLDLAIDNLNNSLTS 155 (565)
T ss_pred HHHHHhhcCCc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998875 567999999999999999999998876665 37889999999999999999999999987
Q ss_pred hhh-cccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 026791 159 LNA-TLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTLLQKFGL 230 (233)
Q Consensus 159 ~~~-~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~~~~~~ 230 (233)
++. .. .+..+|++||||||||||+||+|||++ +.+++.|...+.++.||+||+|||++++...+.++++
T Consensus 156 l~~~~~-~~~~dDl~TWLSAAlTnq~TClDGF~e--~~vk~~~~~~l~n~~eLtSNaLAIi~~l~~~~~~~~~ 225 (565)
T PLN02468 156 SGGVSV-LDNVDDLRTWLSSAGTYQETCIDGLAE--PNLKSFGENHLKNSTELTSNSLAIITWIGKIADSVKL 225 (565)
T ss_pred Hhcccc-ccchHHHHHHHHHHhcchhhhhhhhcc--cCchHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 532 12 456799999999999999999999986 3688999999999999999999999998877766554
No 3
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.7e-40 Score=315.90 Aligned_cols=198 Identities=21% Similarity=0.485 Sum_probs=167.6
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhheeeecCCCcccc-cccchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCCh
Q 026791 26 RTHQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQ-QRLDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDP 104 (233)
Q Consensus 26 ~~~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~ 104 (233)
|++||+ +|++++++|||++++++++++..+.++..++ ...++.+.|+.+|+.|+||++|+++|++.+ . ...+|
T Consensus 10 ~~~~~~-~~~~~~~~llv~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~----~~~~p 83 (670)
T PLN02217 10 KRKKRY-VIISISSVLLISMVVAVTIGVSVNKSDNEGKGEITTSVKAIKDVCAPTDYKETCEDTLRKDA-K----NTSDP 83 (670)
T ss_pred hcccee-ehHHHHHHHHHHHHHheeEEEeccccCCCCccccchHHHHHHHHhcCCCCcHHHHHHhhhhc-c----cCCCH
Confidence 556788 8999999999999999998877664433221 223456699999999999999999999877 3 45689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhh----cccccChhhHHHHHH
Q 026791 105 EVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQLRDASSRLNDSMSELNA----TLTDRTVNDIQTWIS 176 (233)
Q Consensus 105 ~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~----~~~~~~~~D~~twLS 176 (233)
++|++++|+++++++.++...++++ .+++++.||+||+|+|++++|+|++++.+++. .+ ....+|++||||
T Consensus 84 ~dLi~aaL~vTl~a~~~a~~~~s~L~~~~~~~r~k~AL~DClELlddAvDeL~~Sl~~L~~~~~~~~-~~~~dDvqTWLS 162 (670)
T PLN02217 84 LELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMALDQCKELMDYAIGELSKSFEELGKFEFHKV-DEALIKLRIWLS 162 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-ccchhHHHHHHH
Confidence 9999999999999999998777766 57899999999999999999999999988531 12 345799999999
Q ss_pred HHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 026791 177 AAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTLLQKFGL 230 (233)
Q Consensus 177 AAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~~~~~~ 230 (233)
||||||+||+|||++.++.+++.|...+.++.+|+||+|||++++...+.+|++
T Consensus 163 AALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~lss~~~~~~~ 216 (670)
T PLN02217 163 ATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEMSNYLGQMQI 216 (670)
T ss_pred HHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 999999999999986545688999999999999999999999998887776665
No 4
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4.8e-40 Score=312.22 Aligned_cols=200 Identities=21% Similarity=0.395 Sum_probs=165.8
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhheeeecCCCcccc-cc---cchhHHHHccCCCCCChhchhHHhccccCCCCCCCC
Q 026791 26 RTHQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQ-QR---LDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTK 101 (233)
Q Consensus 26 ~~~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~ 101 (233)
|++||+ +|++++++|||++++++++++..+.+++.++ .+ ...+..|+.+|+.|+||++|+++|++.|.+ ..
T Consensus 27 ~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iks~C~~T~YP~lC~sSLs~~p~s----~~ 101 (587)
T PLN02484 27 RRRRKT-KLVLFSIVLLIVSAVAAAIFAGVRAKASGQTSPKSLHRKPTQAISKTCSKTRFPNLCVDSLLDFPGS----LT 101 (587)
T ss_pred cccceE-hHHHHHHHHHHHHHHhheEEEeccccCCCCCCCCccccChhHHHHHhccCCCChHHHHHHHhhcccc----cc
Confidence 556788 9999999999999999988877664333221 11 124569999999999999999999998875 56
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHH
Q 026791 102 PDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISA 177 (233)
Q Consensus 102 ~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSA 177 (233)
.+|++|++++++++++++.++......+ .+++++.||+||+|+|++++|+|++++.+++..-.....+|++|||||
T Consensus 102 ~~p~~L~~~slnvtl~~~~~a~~~s~~l~~~~~~~r~k~AL~DClELlddAid~L~~Sl~~l~~~~~~~~~~DvkTWLSA 181 (587)
T PLN02484 102 ASESDLIHISFNMTLQHFSKALYLSSTISYVQMPPRVRSAYDSCLELLDDSVDALSRALSSVVPSSGGGSPQDVVTWLSA 181 (587)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHhHHHH
Confidence 7999999999999999999887665544 578999999999999999999999999885420003467999999999
Q ss_pred HhccHHHHHHhhhhc-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcCC
Q 026791 178 AMTDEETCLDGLEEM-GSTVADEVKTMMKKSKELLSYSLAIIANIRT-LLQKFGL 230 (233)
Q Consensus 178 Alt~q~TC~Dgf~~~-~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~-~~~~~~~ 230 (233)
|||||+||+|||++. ++.++++|.+.+.++.+|+||+|||++.+.+ .+.+|++
T Consensus 182 ALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~~~~~~~~~~~ 236 (587)
T PLN02484 182 ALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSASNGGDFSGVPI 236 (587)
T ss_pred HhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 999999999999875 3568999999999999999999999999876 5555444
No 5
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.2e-39 Score=309.92 Aligned_cols=201 Identities=22% Similarity=0.394 Sum_probs=165.6
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhheeeecCCCccccc-ccchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCC
Q 026791 25 LRTHQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQQ-RLDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPD 103 (233)
Q Consensus 25 ~~~~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~ 103 (233)
+|++||++++++++++|||++++++++++..+.++...+. ....+..|+.+|+.|+||++|+++|++.+.. ...+
T Consensus 14 ~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Iks~C~~T~YP~~C~ssLs~~~~~----~~~~ 89 (587)
T PLN02313 14 FKNNKKLILSSAAIALLLVAAVVGIAAGTTNQNKNRKITTLSSTSHAVLKSVCSSTLYPELCFSAVAATGGK----ELTS 89 (587)
T ss_pred hhccceeeHHHHHHHHHHHHHHHhhheeeecccCCCCCCccccCHhHHHHHhccCCCChHHHHHHHhccCCc----ccCC
Confidence 4677766477889999999999999988876643332211 1224569999999999999999999988765 5568
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh------hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhh-----cccccChhhHH
Q 026791 104 PEVILKLSLQVNVNHFSNITSSIKSL------YGNHLEVALRDCVDQLRDASSRLNDSMSELNA-----TLTDRTVNDIQ 172 (233)
Q Consensus 104 ~~~l~~~sl~~t~~~~~~a~~~~~~l------~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~-----~~~~~~~~D~~ 172 (233)
|++|++++|+++++++.++...++++ ++++++.||+||+|+|++++|+|++++.+++. .+ ....+|++
T Consensus 90 ~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELlddavD~L~~Sl~~l~~~~~~~~~-~~~~dDlq 168 (587)
T PLN02313 90 QKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSL-RKHADDLK 168 (587)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ccchhHHH
Confidence 99999999999999999999888776 36789999999999999999999999988431 22 34579999
Q ss_pred HHHHHHhccHHHHHHhhhhc--CcchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcCC
Q 026791 173 TWISAAMTDEETCLDGLEEM--GSTVADEVKTMMKKSKELLSYSLAIIANIRT-LLQKFGL 230 (233)
Q Consensus 173 twLSAAlt~q~TC~Dgf~~~--~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~-~~~~~~~ 230 (233)
||||||||||+||+|||++. ++.+++.|...+.++.+|+||+|||++.+.. .+.+|++
T Consensus 169 TWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~~~~~~~~~~~~~ 229 (587)
T PLN02313 169 TLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFEL 229 (587)
T ss_pred HHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999999999854 3468899999999999999999999998875 5545554
No 6
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=6.4e-39 Score=304.75 Aligned_cols=217 Identities=24% Similarity=0.445 Sum_probs=171.8
Q ss_pred ccCCCCCchhhhhhccccccccchhhHHHHHHHHHHHHHHHHHhhee-eecCCCc-----cc----cc-------ccchh
Q 026791 7 MKGYDKVDHLQNRAGIHSLRTHQRLKTAVTISAIVLLTLIIGLMLAV-LIRESNA-----EE----QQ-------RLDAA 69 (233)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~k~~~~i~~~s~illv~~~~~~~~~~-~~~~~~~-----~~----~~-------~~~~~ 69 (233)
|.-|+|..|. .....++|.|||| +|+.+++++|+++|++.+++. ..+..++ .+ ++ +.+..
T Consensus 3 ~~~~~~~~e~--~~~~~~~~~r~ri-~~~~~~~~~~~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (596)
T PLN02745 3 FQDFDKISER--RNAERQQKFRKRI-IIGAVSALVVVAAVAGGVFAYVSYENKSQNQSGNGNNSSKDSPVKSESPVSQVD 79 (596)
T ss_pred ccccchhhHH--HHHHHHHhhhheE-EEeehHHHHHHHHHHHHHHHHhhhccccCCcCCCCCCccCCCCCcCcCCCchHH
Confidence 5568898874 2233445677888 788888888777777666443 2221111 00 01 12346
Q ss_pred HHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh--hchhhHHHHHHHHHHHHH
Q 026791 70 ESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL--YGNHLEVALRDCVDQLRD 147 (233)
Q Consensus 70 ~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l--~d~~~k~AL~dC~el~~~ 147 (233)
+.|+.+|+.|+||++|+++|++..... +...+|++|++++|+++++++..+...+.++ .+++.+.|++||+|+|++
T Consensus 80 ~~Ik~~C~~T~YP~~C~sSLs~~~~~~--~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~~~~~r~k~Al~DC~ELldd 157 (596)
T PLN02745 80 KIIQTVCNATLYKQTCENTLKKGTEKD--PSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFKFENPDEKDAIEDCKLLVED 157 (596)
T ss_pred HHHHHhcCCCCChHHHHHHHHhhcccc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 789999999999999999999864310 1356899999999999999999999888877 689999999999999999
Q ss_pred HHHHHHHhHHhhhh---cccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026791 148 ASSRLNDSMSELNA---TLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTL 224 (233)
Q Consensus 148 a~d~L~~s~~~~~~---~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~ 224 (233)
++|+|++++.+++. .+ .+.++|++||||||||||+||+|||++ +.++++|...+.++.+|+||+|||++.+...
T Consensus 158 Aid~L~~Sl~~l~~~~~~~-~~~~~Dv~TWLSAALT~q~TClDGF~e--~~l~s~m~~~l~~~~eLtSNALAiv~~lss~ 234 (596)
T PLN02745 158 AKEELKASISRINDEVNKL-AKNVPDLNNWLSAVMSYQETCIDGFPE--GKLKSEMEKTFKSSQELTSNSLAMVSSLTSF 234 (596)
T ss_pred HHHHHHHHHHHHhhccccc-ccchHHHHHHHHHHhccHhHHHhhhcc--cchHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999988531 23 567899999999999999999999987 4689999999999999999999999999887
Q ss_pred hhhcCCC
Q 026791 225 LQKFGLH 231 (233)
Q Consensus 225 ~~~~~~~ 231 (233)
+..|+++
T Consensus 235 ~~~~~~~ 241 (596)
T PLN02745 235 LSSFSVP 241 (596)
T ss_pred hhhcccC
Confidence 7776653
No 7
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.1e-38 Score=300.25 Aligned_cols=194 Identities=22% Similarity=0.463 Sum_probs=159.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhheeeecCCCccccc--c---cchhHHHHccCCCCCChhchhHHhcc-ccCCCCCCCC
Q 026791 28 HQRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQQ--R---LDAAESIKTVCSVTQNPDSCFTALSS-SLNISSTTTK 101 (233)
Q Consensus 28 ~k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~i~~~C~~T~yp~~C~~sL~~-~~~s~~~~~~ 101 (233)
+||+ +|++++++|||++++ +++++..+.++..+.. + ...+..|+.+|+.|+||++|+++|++ .+. .
T Consensus 9 ~~~~-~~~~~~~~l~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ik~~C~~T~YP~lC~ssLs~a~~~------~ 80 (572)
T PLN02990 9 KKKC-IIAGVITALLVIMVV-AVAIVTSRNTSHNSEKIVPVQIKTTTKAVEAVCAPTDYKETCVNSLMKASPD------S 80 (572)
T ss_pred ccee-hHHHHHHHHHHHhhh-eeEEEeccccCCCCcccCcccccchhHHHHHhhcCCCCcHHHHHHhhhcccc------C
Confidence 4688 889999999999999 6666665543322111 1 12456999999999999999999998 332 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhh------hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhh----cccccChhhH
Q 026791 102 PDPEVILKLSLQVNVNHFSNITSSIKSL------YGNHLEVALRDCVDQLRDASSRLNDSMSELNA----TLTDRTVNDI 171 (233)
Q Consensus 102 ~~~~~l~~~sl~~t~~~~~~a~~~~~~l------~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~----~~~~~~~~D~ 171 (233)
.+|++|++++++++++++.++...+.++ .+++++.||+||+|+|++++|+|++++.+++. .+ ....+|+
T Consensus 81 ~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~ELlddAvdeL~~Sl~~l~~~~~~~~-~~~~~Dv 159 (572)
T PLN02990 81 TQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKLMNDATDDLKKCLDNFDGFSIDQI-EDFVEDL 159 (572)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-cchhHHH
Confidence 6899999999999999999988766544 57899999999999999999999999988531 12 3457999
Q ss_pred HHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 026791 172 QTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTLLQKFGL 230 (233)
Q Consensus 172 ~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~~~~~~ 230 (233)
+||||||||||+||+|||++.++.+++.|...+.++.+|+||+|||++++...+..+++
T Consensus 160 qTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~~~~~~~~~~~ 218 (572)
T PLN02990 160 RVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNISNLLGEFNI 218 (572)
T ss_pred HHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Confidence 99999999999999999986655689999999999999999999999999887777665
No 8
>PLN02197 pectinesterase
Probab=100.00 E-value=9.5e-38 Score=295.75 Aligned_cols=189 Identities=15% Similarity=0.301 Sum_probs=162.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHhheeeecCCCcccccccchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHH
Q 026791 29 QRLKTAVTISAIVLLTLIIGLMLAVLIRESNAEEQQRLDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVIL 108 (233)
Q Consensus 29 k~~~~i~~~s~illv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~ 108 (233)
.|+ +|++++++|||++++++++++..+++++ ..++.+.|+.+|+.|+||++|+++|++.+ . .+|++|+
T Consensus 3 ~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~----~~~~~k~I~s~C~~T~YP~lC~ssLs~~~-s------~~p~~L~ 70 (588)
T PLN02197 3 GKV-VVSVASILLIVGVAIGVVAFINKNGDAN----LSPQMKAVQGICQSTSDKASCVKTLEPVK-S------DDPNKLI 70 (588)
T ss_pred ceE-hHHHHHHHHHHHHHhheeEEEeccCCCC----CChhHHHHHHhcCCCCChHHHHHHHhhcc-C------CCHHHHH
Confidence 467 8889999999999999988877664332 23456699999999999999999999876 2 4799999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-------hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhh---cccccChhhHHHHHHHH
Q 026791 109 KLSLQVNVNHFSNITSSIKSL-------YGNHLEVALRDCVDQLRDASSRLNDSMSELNA---TLTDRTVNDIQTWISAA 178 (233)
Q Consensus 109 ~~sl~~t~~~~~~a~~~~~~l-------~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~---~~~~~~~~D~~twLSAA 178 (233)
+++|+++++++.++...++.+ .+++++.||+||+|+|++++|+|++++.+++. .+ ....+|++||||||
T Consensus 71 ~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl~davd~L~~Sl~~l~~~~~~~-~~~~~DvqTWLSAA 149 (588)
T PLN02197 71 KAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVFMYALEDLSTIVEEMGEDLNQI-GSKIDQLKQWLTGV 149 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-ccchhhHHHHHHHH
Confidence 999999999999998877743 37899999999999999999999999988541 22 44579999999999
Q ss_pred hccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 026791 179 MTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTLLQKFGLHM 232 (233)
Q Consensus 179 lt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~~~~~~~~ 232 (233)
||||+||+|||.+. .+++.|...+.++.+|+||+|||++.++..+..+++++
T Consensus 150 LTnq~TClDGf~~~--~~k~~v~~~l~nv~~LtSNaLAiv~~ls~~~~~~~~~~ 201 (588)
T PLN02197 150 YNYQTDCLDDIEED--DLRKTIGEGIANSKILTSNAIDIFHSVVSAMAKLNNKV 201 (588)
T ss_pred HhChhhhhccccCc--chHHHHHHHHHHHHHHHHHHHHHhhccchhhccccccc
Confidence 99999999999863 57888999999999999999999999988888877653
No 9
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=6.4e-32 Score=254.34 Aligned_cols=154 Identities=24% Similarity=0.443 Sum_probs=132.7
Q ss_pred cchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHH
Q 026791 66 LDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDC 141 (233)
Q Consensus 66 ~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC 141 (233)
......|+..|+.|+||++|+++|++..... ...+|++|++++|+++++++.++...++++ .+++++.|++||
T Consensus 31 ~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~---~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~~~~~r~~~Al~DC 107 (537)
T PLN02506 31 LNFQALIAQACQFVENHSSCVSNIQAELKKS---GPRTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDC 107 (537)
T ss_pred hhHHHHHHHHccCCCCcHHHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 4456699999999999999999999764321 346899999999999999999999988876 478999999999
Q ss_pred HHHHHHHHHHHHHhHHhhhhccc-----ccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHH
Q 026791 142 VDQLRDASSRLNDSMSELNATLT-----DRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLA 216 (233)
Q Consensus 142 ~el~~~a~d~L~~s~~~~~~~~~-----~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLA 216 (233)
+|+|++++|+|++++.+++. +. ....+|++||||||||||+||+|||++.++.+++.|...+.++.+|+||+||
T Consensus 108 ~EllddSvd~L~~Sl~el~~-~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALA 186 (537)
T PLN02506 108 KELLDFSVSELAWSLLEMNK-IRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLA 186 (537)
T ss_pred HHHHHHHHHHHHHHHHHHhh-cccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987531 10 1235899999999999999999999876556888999999999999999999
Q ss_pred HHHHHHh
Q 026791 217 IIANIRT 223 (233)
Q Consensus 217 iv~~~~~ 223 (233)
|++++..
T Consensus 187 iv~~l~~ 193 (537)
T PLN02506 187 MYTQLHS 193 (537)
T ss_pred HHhhccc
Confidence 9998765
No 10
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=99.98 E-value=1.7e-31 Score=212.76 Aligned_cols=142 Identities=34% Similarity=0.589 Sum_probs=130.7
Q ss_pred hhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHH
Q 026791 68 AAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVD 143 (233)
Q Consensus 68 ~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~e 143 (233)
....|+.+|+.|+||++|+++|.++|++ ...||.+|++++++.++.++..+...++++ .+++.+.||+||.|
T Consensus 3 ~~~~i~~~C~~T~~~~~C~~~L~~~~~~----~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~~C~~ 78 (148)
T smart00856 3 TSKLIDSICKSTDYPDFCVSSLSSDPSS----SATDPKDLAKIAIKVALSQATKTLSFISSLLKKTKDPRLKAALKDCLE 78 (148)
T ss_pred HHHHHHHHhcCCCChHHHHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 5678999999999999999999999876 678999999999999999999999999887 47899999999999
Q ss_pred HHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHH
Q 026791 144 QLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAI 217 (233)
Q Consensus 144 l~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAi 217 (233)
+|++++++|++++.+++ .++++|+++|||+|++|++||+|||.+.++.++++|...+.++.+|++|+|+|
T Consensus 79 ~y~~a~~~L~~a~~~l~----~~~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 79 LYDDAVDSLEKALEELK----SGDYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHHH----hcchhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999998753 46799999999999999999999998754568899999999999999999986
No 11
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.4e-31 Score=253.28 Aligned_cols=148 Identities=23% Similarity=0.439 Sum_probs=126.2
Q ss_pred chhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHHHH
Q 026791 67 DAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL-----YGNHLEVALRDC 141 (233)
Q Consensus 67 ~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-----~d~~~k~AL~dC 141 (233)
..+..|+..|+.|+||++|+++|++.+... ...+|.+|++++|+++++++.++...++.+ .+...+.|++||
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~---~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC 118 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVP---PDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNC 118 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHH
Confidence 467899999999999999999999887421 345899999999999999999999888876 133445899999
Q ss_pred HHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcC--cchhhHHHHHHHHHHHHHHHHHHHHH
Q 026791 142 VDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMG--STVADEVKTMMKKSKELLSYSLAIIA 219 (233)
Q Consensus 142 ~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~--~~~~~~l~~~~~~~~~L~SNaLAiv~ 219 (233)
+|+|++++|+|++++.++. ...++|++||||||||||+||+|||.+.+ +.+++.| ..+.++.+|+||+|||++
T Consensus 119 ~ELlddavd~L~~Sl~~L~----~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv~ 193 (553)
T PLN02708 119 LEVLSNSEHRISSTDIALP----RGKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMMA 193 (553)
T ss_pred HHHHHHHHHHHHHHHHHhh----hcchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhhh
Confidence 9999999999999998743 45689999999999999999999998652 3456666 688999999999999999
Q ss_pred HHH
Q 026791 220 NIR 222 (233)
Q Consensus 220 ~~~ 222 (233)
++.
T Consensus 194 ~~~ 196 (553)
T PLN02708 194 SYD 196 (553)
T ss_pred ccc
Confidence 853
No 12
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=3.5e-31 Score=249.58 Aligned_cols=152 Identities=24% Similarity=0.411 Sum_probs=131.4
Q ss_pred hHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHH
Q 026791 69 AESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQ 144 (233)
Q Consensus 69 ~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el 144 (233)
...|+..|+.|+||++|+++|++.+... ....+|.+|++++|+++++++..+...++++ .+++.+.||+||+|+
T Consensus 50 ~~~Iks~C~~T~YP~~C~ssLs~~a~~~--~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~~~~~~~~~aAL~DC~EL 127 (548)
T PLN02301 50 PSLLQTLCDRAHDQDSCQAMVSEIATNT--VMKLNRVDLLQVLLKESTPHLQNTIEMASEIRIRINDPRDKAALADCVEL 127 (548)
T ss_pred hHHHHHHhcCCCChHHHHHHHhhccCcc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 4789999999999999999999876431 0234799999999999999999999888877 578999999999999
Q ss_pred HHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026791 145 LRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIRTL 224 (233)
Q Consensus 145 ~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~ 224 (233)
|++++|+|++++.+++. ...+.++|++||||||||||+||+|||.+. .++.|...++++.+|+||+|||++.++..
T Consensus 128 l~davd~L~~Sl~~l~~-~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~---~~~~~~~~l~n~~qL~SNsLAiv~~l~~~ 203 (548)
T PLN02301 128 MDLSKDRIKDSVEALGN-VTSKSHADAHTWLSSVLTNHVTCLDGINGP---SRQSMKPGLKDLISRARTSLAILVSVSPA 203 (548)
T ss_pred HHHHHHHHHHHHHHhhc-ccccchHHHHHHHHHHhcchhhHHhhhhhh---hhhhHHHHHHHHHHHHHHHHHhhcccccc
Confidence 99999999999987542 223567999999999999999999999864 36789999999999999999999987655
Q ss_pred hh
Q 026791 225 LQ 226 (233)
Q Consensus 225 ~~ 226 (233)
+.
T Consensus 204 ~~ 205 (548)
T PLN02301 204 KE 205 (548)
T ss_pred cc
Confidence 44
No 13
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.6e-31 Score=247.88 Aligned_cols=157 Identities=24% Similarity=0.402 Sum_probs=133.7
Q ss_pred ccchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHH
Q 026791 65 RLDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL-----YGNHLEVALR 139 (233)
Q Consensus 65 ~~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-----~d~~~k~AL~ 139 (233)
+.++.+.|+++|+.|+||++|+++|++.+... ...++.++++.+|+.++.++..+...++.+ .+++++.||+
T Consensus 34 ~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~---~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~ 110 (541)
T PLN02416 34 LDPHLSSLTSFCKSTPYPDACFDSLKLSISIN---ISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQ 110 (541)
T ss_pred CchHHHHHHHhcCCCCChHHHHHHHhhccccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHH
Confidence 45567899999999999999999999886431 245788999999999999999888777754 3578899999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 026791 140 DCVDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIA 219 (233)
Q Consensus 140 dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~ 219 (233)
||.|+|++++|+|++++.+++.. ..+.++|++||||||||||+||+|||++.++.+++.|...+.++.||+||+|||++
T Consensus 111 DC~El~~dAvD~L~~Sl~~L~~~-~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~ 189 (541)
T PLN02416 111 DCKELHQITVSSLKRSVSRIQAG-DSRKLADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLP 189 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cccchhhHHHHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999885421 12468999999999999999999999876556788999999999999999999999
Q ss_pred HHHhhh
Q 026791 220 NIRTLL 225 (233)
Q Consensus 220 ~~~~~~ 225 (233)
.+...+
T Consensus 190 ~~~~~~ 195 (541)
T PLN02416 190 KSRRST 195 (541)
T ss_pred cccccc
Confidence 876533
No 14
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=4.3e-31 Score=250.28 Aligned_cols=153 Identities=24% Similarity=0.340 Sum_probs=129.6
Q ss_pred cchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh-------hchhhHHHH
Q 026791 66 LDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL-------YGNHLEVAL 138 (233)
Q Consensus 66 ~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-------~d~~~k~AL 138 (233)
+.....++.+|+.|+||++|+++|++. ...+|+++++++|++++.++.++...++++ .+++++.||
T Consensus 29 ~~~~~~~~s~C~~T~YP~~C~ssLs~s-------~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL 101 (566)
T PLN02713 29 PSTPVSPSTICNTTPDPSFCKSVLPHN-------QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRAL 101 (566)
T ss_pred cCCCCCCccccCCCCChHHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHH
Confidence 345566788999999999999999762 345899999999999999999999888876 177889999
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhh---cccccChhhHHHHHHHHhccHHHHHHhhhhc--CcchhhHHHHHHHHHHHHHHH
Q 026791 139 RDCVDQLRDASSRLNDSMSELNA---TLTDRTVNDIQTWISAAMTDEETCLDGLEEM--GSTVADEVKTMMKKSKELLSY 213 (233)
Q Consensus 139 ~dC~el~~~a~d~L~~s~~~~~~---~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~--~~~~~~~l~~~~~~~~~L~SN 213 (233)
+||+|+|++++|+|++++.+++. ....+..+|++||||||||||+||+|||.+. ++.+++.|...+.++.+|+||
T Consensus 102 ~DC~ELlddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSN 181 (566)
T PLN02713 102 EDCQFLAGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSV 181 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988532 1114578999999999999999999999865 335778899999999999999
Q ss_pred HHHHHHH--HHhhh
Q 026791 214 SLAIIAN--IRTLL 225 (233)
Q Consensus 214 aLAiv~~--~~~~~ 225 (233)
+|||++. +...+
T Consensus 182 aLAlv~~~~~~~~~ 195 (566)
T PLN02713 182 SLALFTKGWVPKKK 195 (566)
T ss_pred HHHHhccccccccc
Confidence 9999997 44443
No 15
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.97 E-value=9.3e-31 Score=246.94 Aligned_cols=150 Identities=25% Similarity=0.343 Sum_probs=127.9
Q ss_pred HccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh---------hchhhHHHHHHHHH
Q 026791 73 KTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL---------YGNHLEVALRDCVD 143 (233)
Q Consensus 73 ~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l---------~d~~~k~AL~dC~e 143 (233)
..+|+.|+||++|+++|++.+.. ..+|+++++++|++++.++.++...++++ .+++++.||+||+|
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~-----~~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~E 77 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSS-----PSDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGE 77 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHH
Confidence 46899999999999999987653 35899999999999999999998888765 35788899999999
Q ss_pred HHHHHHHHHHHhHHhhhh--cccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHH-
Q 026791 144 QLRDASSRLNDSMSELNA--TLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIAN- 220 (233)
Q Consensus 144 l~~~a~d~L~~s~~~~~~--~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~- 220 (233)
||++++|+|++++.+++. .......+|++||||||||||+||+|||.+.++.+++.|...+.++.+|+||+|||++.
T Consensus 78 LlddSvD~L~~Sl~~L~~~~~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~~ 157 (538)
T PLN03043 78 LSELNVDYLETISSELKSAELMTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSHA 157 (538)
T ss_pred HHHHHHHHHHHHHHHHhccccccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999988542 11134579999999999999999999998664568889999999999999999999996
Q ss_pred HHhhhhh
Q 026791 221 IRTLLQK 227 (233)
Q Consensus 221 ~~~~~~~ 227 (233)
+...+..
T Consensus 158 ~s~~~~~ 164 (538)
T PLN03043 158 LNRNLKK 164 (538)
T ss_pred ccccccc
Confidence 5544444
No 16
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=99.97 E-value=5.5e-30 Score=210.59 Aligned_cols=146 Identities=31% Similarity=0.515 Sum_probs=133.1
Q ss_pred hhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHH
Q 026791 68 AAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVD 143 (233)
Q Consensus 68 ~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~e 143 (233)
....|+.+|+.|+||++|+++|.++|++ ...+|.+|+.++++.+..++..+...+.++ .+++.+.+|+||.+
T Consensus 28 ~~~~i~~~C~~t~~~~~C~~~L~~~~~~----~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~al~~C~~ 103 (178)
T TIGR01614 28 TQSLIKRICKKTEYPNFCISTLKSDPSS----AKADLQGLANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCVE 103 (178)
T ss_pred hHHHHHHHHcCCCChHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence 4579999999999999999999999876 556999999999999999999999999988 46889999999999
Q ss_pred HHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026791 144 QLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANI 221 (233)
Q Consensus 144 l~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~ 221 (233)
+|++++++|++++.+.+ .++++|+++|||+|+++++||.|||.+.++..++++...++++.+|++|+|+|++.+
T Consensus 104 ~y~~a~~~L~~a~~~l~----~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 104 LYSDAVDALDKALASLK----SKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HHHHHHHHHHHHHHHHH----hcchhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998743 567999999999999999999999987633568899999999999999999999865
No 17
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.6e-30 Score=241.04 Aligned_cols=151 Identities=22% Similarity=0.338 Sum_probs=125.7
Q ss_pred HHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHH
Q 026791 70 ESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQL 145 (233)
Q Consensus 70 ~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~ 145 (233)
..|+.+|+.|+||++|+++|.+.|.+. ...++.++++.++++++.++.++...++.+ .+++.+.||+||+|+|
T Consensus 35 ~~Irs~C~~T~YP~lC~sSLs~~~~s~---s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~~~~~r~~~AL~DC~ELl 111 (539)
T PLN02995 35 TDIDGWCDKTPYPDPCKCYFKNHNGFR---QPTQISEFRVMLVEAAMDRAISARDELTNSGKNCTDFKKQAVLADCIDLY 111 (539)
T ss_pred HHHHhhcCCCCChHHHHHHHhhccccc---cccCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 489999999999999999999987641 334899999999999999999999888776 4788999999999999
Q ss_pred HHHHHHHHHhHHhhhhccc---ccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHH--HHHHHHHHHHHHHHHH
Q 026791 146 RDASSRLNDSMSELNATLT---DRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMM--KKSKELLSYSLAIIAN 220 (233)
Q Consensus 146 ~~a~d~L~~s~~~~~~~~~---~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~--~~~~~L~SNaLAiv~~ 220 (233)
+|++|+|++++.+++..-. ....+|++||||||||||+||+|||++. .++..+...+ .++.+|+||+|||++.
T Consensus 112 ~DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~--~~~~~v~~~v~~~~~~~ltSNaLAi~~~ 189 (539)
T PLN02995 112 GDTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDL--NVSDFITPIVSNTKISHLISNCLAVNGA 189 (539)
T ss_pred HHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccc--cchhhhhhhhhhhhHHHHHHHHHHHhhh
Confidence 9999999999988532100 1256899999999999999999999864 3444455555 6799999999999998
Q ss_pred HHhhh
Q 026791 221 IRTLL 225 (233)
Q Consensus 221 ~~~~~ 225 (233)
+...+
T Consensus 190 l~~~~ 194 (539)
T PLN02995 190 LLTAG 194 (539)
T ss_pred hcccc
Confidence 76543
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.1e-29 Score=237.79 Aligned_cols=150 Identities=23% Similarity=0.364 Sum_probs=130.6
Q ss_pred ccchhHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh-----h--chhhHHH
Q 026791 65 RLDAAESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL-----Y--GNHLEVA 137 (233)
Q Consensus 65 ~~~~~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-----~--d~~~k~A 137 (233)
+.+....|+.+|+.|+||++|+++|++.+. +|++|++++|++++.++.++...++++ . +++.+.|
T Consensus 18 ~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~--------~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~A 89 (497)
T PLN02698 18 PFAYQNEVQRECSFTKYPSLCVQTLRGLRH--------DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSV 89 (497)
T ss_pred chhHHHHHHHhccCCCChHHHHHHHhccCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHH
Confidence 345788999999999999999999988631 799999999999999999999888876 1 3777899
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhc----CcchhhHHHHHHHHHHHHHHH
Q 026791 138 LRDCVDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEM----GSTVADEVKTMMKKSKELLSY 213 (233)
Q Consensus 138 L~dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~----~~~~~~~l~~~~~~~~~L~SN 213 (233)
++||+|+|++++|+|++++.+++. .+...++|++||||||||||+||+|||.+. ++.+++.|...+.++.+|+||
T Consensus 90 l~DC~Ell~dsvd~L~~Sl~~l~~-~~~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSN 168 (497)
T PLN02698 90 SDSCERLMKMSLKRLRQSLLALKG-SSRKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSN 168 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-ccccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987542 223678999999999999999999999542 246789999999999999999
Q ss_pred HHHHHHHHHh
Q 026791 214 SLAIIANIRT 223 (233)
Q Consensus 214 aLAiv~~~~~ 223 (233)
+|||++.+..
T Consensus 169 ALAmv~~l~~ 178 (497)
T PLN02698 169 SLALVNRITP 178 (497)
T ss_pred HHHHHhhhhc
Confidence 9999998775
No 19
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.96 E-value=4.3e-28 Score=193.42 Aligned_cols=144 Identities=30% Similarity=0.518 Sum_probs=123.5
Q ss_pred hhHHHHccCCCCCChh-chhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHHHH
Q 026791 68 AAESIKTVCSVTQNPD-SCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL-----YGNHLEVALRDC 141 (233)
Q Consensus 68 ~~~~i~~~C~~T~yp~-~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-----~d~~~k~AL~dC 141 (233)
+...|+.+|+.|+||. +|+++|.+.+.. ...+|.+|+++++++++.++..+...++++ .++..+.+|++|
T Consensus 3 ~~~~I~~~C~~T~~~~~~C~~~L~~~~~~----~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C 78 (152)
T PF04043_consen 3 TSSLIQDICKSTPYPYNLCLSTLSSDPSS----SAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDC 78 (152)
T ss_dssp -HHHHHHHHCTSS--HHHHHHHHHTCCCG----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHH
T ss_pred hHHHHHHHhhCCCCCcHHHHHHHhccCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHH
Confidence 4678999999999888 999999999665 678999999999999999999999999887 368899999999
Q ss_pred HHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHH
Q 026791 142 VDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAI 217 (233)
Q Consensus 142 ~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAi 217 (233)
.++|++++++|++++...+ ...++++|+++|||+|++|++||.|||.+..+..+++|...+.++.+|++|+|||
T Consensus 79 ~~~y~~a~~~l~~a~~~l~--~~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 79 QELYDDAVDSLQRALEALN--SKNGDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhh--cccchhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999861 0267899999999999999999999995323567899999999999999999997
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=4.2e-25 Score=207.21 Aligned_cols=123 Identities=25% Similarity=0.401 Sum_probs=107.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhh-------hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhhcccccChhhHHH
Q 026791 101 KPDPEVILKLSLQVNVNHFSNITSSIKSL-------YGNHLEVALRDCVDQLRDASSRLNDSMSELNATLTDRTVNDIQT 173 (233)
Q Consensus 101 ~~~~~~l~~~sl~~t~~~~~~a~~~~~~l-------~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~t 173 (233)
..+|++|++++|+++++++.++...++.+ .++++++|++||+|+|++++|+|++++.+++. . .+.++|++|
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~-~-~~~~~Dv~T 125 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRS-S-SPEFNDVSM 125 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c-ccchhHHHH
Confidence 46899999999999999999999888876 26889999999999999999999999987542 1 245899999
Q ss_pred HHHHHhccHHHHHHhhhhcC--------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026791 174 WISAAMTDEETCLDGLEEMG--------STVADEVKTMMKKSKELLSYSLAIIANIRTLL 225 (233)
Q Consensus 174 wLSAAlt~q~TC~Dgf~~~~--------~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~ 225 (233)
|||||||||+||+|||.+.+ +.+++.|...+.++.+|+||+|||+++++..+
T Consensus 126 WLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~~~ 185 (530)
T PLN02933 126 LLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISGKI 185 (530)
T ss_pred HHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 99999999999999998542 14788899999999999999999999877644
No 21
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=6.2e-24 Score=197.40 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=123.1
Q ss_pred ccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh----h-chhhHHHHHHH----HHH
Q 026791 74 TVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSL----Y-GNHLEVALRDC----VDQ 144 (233)
Q Consensus 74 ~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l----~-d~~~k~AL~dC----~el 144 (233)
.+|+.|+||+.|...|+............++.+++.++|+.++.++..+...+..+ . +++++.|++|| +||
T Consensus 3 ~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~el 82 (509)
T PLN02488 3 GVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEEM 82 (509)
T ss_pred eecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHHH
Confidence 58999999999999988765110001334689999999999999999999888877 4 89999999999 999
Q ss_pred HHHHHHHHHHhHHhhh--hcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 026791 145 LRDASSRLNDSMSELN--ATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANIR 222 (233)
Q Consensus 145 ~~~a~d~L~~s~~~~~--~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~~ 222 (233)
|++++|+|++++.... ........+|++||||||||||+||+|||.+ +.++..|...+.++++|+||+|||+..+.
T Consensus 83 ~~~~~~~l~~s~~~~~~~~~~~~~~~~d~~twLSa~lt~q~TC~dg~~~--~~~~~~~~~~l~~~~~~~sn~La~~~~~~ 160 (509)
T PLN02488 83 MESAKDRMIRSVEELLGGESPNLGSYENVHTWLSGVLTSYITCIDEIGE--GAYKRRVEPELEDLISRARVALAIFISIS 160 (509)
T ss_pred HHHHHHHHHHHHHHhhcccccccCcHHHHHHHHHHhHhchhhHhccccC--cchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999998853 1111244689999999999999999999953 46888999999999999999999999765
No 22
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=1e-23 Score=197.49 Aligned_cols=138 Identities=23% Similarity=0.314 Sum_probs=108.1
Q ss_pred hHHHHccCCCCCChhchhHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHH
Q 026791 69 AESIKTVCSVTQNPDSCFTALSSSLNISSTTTKPDPEVILKLSLQVNVNHFSNITSSIKSLYGNHLEVALRDCVDQLRDA 148 (233)
Q Consensus 69 ~~~i~~~C~~T~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~sl~~t~~~~~~a~~~~~~l~d~~~k~AL~dC~el~~~a 148 (233)
...+++. +||..|+.+|++... +-|+.++..++++.+........ ....+|++||+|+|+++
T Consensus 51 ~~~~~~~----~~~~~~~~~~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Al~DC~ELldda 112 (529)
T PLN02170 51 DSSSRSS----PSSSSKQGFLSSVQE-------SMNHALFARSLAFNLTLSHRTVQ-------THTFDPVNDCLELLDDT 112 (529)
T ss_pred cccccCC----CCcchhhhhhhhhhc-------cChHHHHHhhhHhhhhhhhhhcc-------cchhHHHHHHHHHHHHH
Confidence 3445544 999999999997732 34888999999887773322221 22268999999999999
Q ss_pred HHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 026791 149 SSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMG--STVADEVKTMMKKSKELLSYSLAIIANIRTLLQ 226 (233)
Q Consensus 149 ~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~--~~~~~~l~~~~~~~~~L~SNaLAiv~~~~~~~~ 226 (233)
+|+|+++++.... .+..+|++||||||||||+||+|||++.+ ..++..+...+.++.+|+||+|||++.+...+.
T Consensus 113 vd~L~~S~~~~~~---~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~~ 189 (529)
T PLN02170 113 LDMLSRIVVIKHA---DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKHS 189 (529)
T ss_pred HHHHHHHHHhhcc---ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 9999999965321 46789999999999999999999998652 345667888889999999999999998776555
Q ss_pred h
Q 026791 227 K 227 (233)
Q Consensus 227 ~ 227 (233)
.
T Consensus 190 ~ 190 (529)
T PLN02170 190 S 190 (529)
T ss_pred c
Confidence 3
No 23
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.7e-22 Score=189.72 Aligned_cols=119 Identities=24% Similarity=0.376 Sum_probs=103.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHHHHHHHHHHhHHhhhhc-----ccccChhhHHH
Q 026791 103 DPEVILKLSLQVNVNHFSNITSSIKSL----YGNHLEVALRDCVDQLRDASSRLNDSMSELNAT-----LTDRTVNDIQT 173 (233)
Q Consensus 103 ~~~~l~~~sl~~t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~~~a~d~L~~s~~~~~~~-----~~~~~~~D~~t 173 (233)
.+.++++++|+++++++.++...++++ .++++++|++||+|++++++|+|++++.+++.. ......+|++|
T Consensus 36 ~~~~~~~~~L~~tl~~a~~a~~~vs~l~~~~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 36 VPPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 356889999999999999999888876 478999999999999999999999999885320 00235799999
Q ss_pred HHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 026791 174 WISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSYSLAIIANI 221 (233)
Q Consensus 174 wLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SNaLAiv~~~ 221 (233)
|||||||||+||+|||++.++.+++.+...+.++.+|+||+|||++..
T Consensus 116 WLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~ 163 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPP 163 (520)
T ss_pred HHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999987655678888899999999999999999874
No 24
>PLN02916 pectinesterase family protein
Probab=99.76 E-value=6.1e-18 Score=158.03 Aligned_cols=86 Identities=33% Similarity=0.521 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhhcCcchhhHHHHHHHHHHHHHHH
Q 026791 134 LEVALRDCVDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEEMGSTVADEVKTMMKKSKELLSY 213 (233)
Q Consensus 134 ~k~AL~dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~~~~~~~~~l~~~~~~~~~L~SN 213 (233)
..+|++||+|+|++++|+|++++..+. ....+|++||||||||||+||+|||++. +... ...+.++.+|+||
T Consensus 61 ~~~Al~DC~ELl~dSvd~L~~Sl~~~~----~~~~~DvqTWLSAALTnq~TClDGf~~~-~~~~---~~~v~nvt~ltSN 132 (502)
T PLN02916 61 LGEALSDCEKLYDESEARLSKLLVSHE----NFTVEDARTWLSGVLANHHTCLDGLEQK-GQGH---KPMAHNVTFVLSE 132 (502)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhc----cCchHHHHHHHHHHHhCHhHHHHhhhhc-cccc---hHHHHHHHHHHHH
Confidence 568999999999999999999997643 3357999999999999999999999864 2222 3457899999999
Q ss_pred HHHHHHHHHhhhhh
Q 026791 214 SLAIIANIRTLLQK 227 (233)
Q Consensus 214 aLAiv~~~~~~~~~ 227 (233)
+|||++.+...+..
T Consensus 133 aLAlv~~~~~~~~~ 146 (502)
T PLN02916 133 ALALYKKSRGHMKK 146 (502)
T ss_pred HHHHhhhhhhhhhc
Confidence 99999998875543
No 25
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=71.93 E-value=37 Score=24.98 Aligned_cols=29 Identities=14% Similarity=0.266 Sum_probs=24.8
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHhHHh
Q 026791 130 YGNHLEVALRDCVDQLRDASSRLNDSMSE 158 (233)
Q Consensus 130 ~d~~~k~AL~dC~el~~~a~d~L~~s~~~ 158 (233)
.++.++.|+.-|.+-|.+|-.-+.++.-.
T Consensus 58 l~~~e~~Cis~CmdRyMdawniVSrty~s 86 (97)
T KOG1733|consen 58 LDSSEKSCISRCMDRYMDAWNIVSRTYIS 86 (97)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999998888777654
No 26
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=67.56 E-value=31 Score=22.33 Aligned_cols=39 Identities=8% Similarity=0.216 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhh----hchhhHHHHHHHHHHHHHHHHHHH
Q 026791 115 NVNHFSNITSSIKSL----YGNHLEVALRDCVDQLRDASSRLN 153 (233)
Q Consensus 115 t~~~~~~a~~~~~~l----~d~~~k~AL~dC~el~~~a~d~L~ 153 (233)
++..++++.+....+ .|+..|..++.|.+.++..+++|+
T Consensus 5 ~lAslK~~qA~Le~fal~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 5 TLASLKKAQADLETFALQTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHhhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 344444444444444 578889999999999999988885
No 27
>PF08999 SP_C-Propep: Surfactant protein C, N terminal propeptide; InterPro: IPR015091 The N-terminal propeptide of surfactant protein C adopts an alpha-helical structure, with turn and extended regions. Its main function is the stabilisation of metastable surfactant protein C (SP-C), since the latter can irreversibly transform from its native alpha-helical structure to beta-sheet aggregates and form amyloid-like fibrils. The correct intracellular trafficking of proSP-C has also been reported to depend on the propeptide []. ; PDB: 1SPF_A 2YAD_F.
Probab=55.43 E-value=16 Score=26.33 Aligned_cols=21 Identities=19% Similarity=0.619 Sum_probs=14.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHh
Q 026791 29 QRLKTAVTISAIVLLTLIIGLM 50 (233)
Q Consensus 29 k~~~~i~~~s~illv~~~~~~~ 50 (233)
||+ +|+++..+++|.+++|+.
T Consensus 34 Krl-liivvVvVlvVvvivg~L 54 (93)
T PF08999_consen 34 KRL-LIIVVVVVLVVVVIVGAL 54 (93)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHH
T ss_pred ceE-EEEEEeeehhHHHHHHHH
Confidence 777 776666666666666655
No 28
>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology. Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane
Probab=44.83 E-value=3.6e+02 Score=27.53 Aligned_cols=24 Identities=8% Similarity=0.237 Sum_probs=14.5
Q ss_pred ccChhhHHHHHHHHhcc---HHHHHHh
Q 026791 165 DRTVNDIQTWISAAMTD---EETCLDG 188 (233)
Q Consensus 165 ~~~~~D~~twLSAAlt~---q~TC~Dg 188 (233)
.....++|.-|..++.+ ...|.+-
T Consensus 273 ~~~L~~vK~~L~~~l~~~C~~~~C~~i 299 (806)
T PF05478_consen 273 RDGLRGVKRDLNNTLQDLCTNRECNSI 299 (806)
T ss_pred HHHHHHHHHHHHHHHHhhCCChhhHHH
Confidence 44566777777777766 1256654
No 29
>PF12729 4HB_MCP_1: Four helix bundle sensory module for signal transduction; InterPro: IPR024478 This entry represents a four-helix bundle that operates as a ubiquitous sensory module in prokaryotic signal-transduction, which is known as four-helix bundles methyl-accepting chemotaxis protein (4HB_MCP) domain. The 4HB_MCP is always found between two predicted transmembrane helices indicating that it detects only extracellular signals. In many cases the domain is associated with a cytoplasmic HAMP domain suggesting that most proteins carrying the bundle might share the mechanism of transmembrane signalling which is well-characterised in E coli chemoreceptors [].
Probab=41.27 E-value=1.6e+02 Score=22.42 Aligned_cols=20 Identities=35% Similarity=0.665 Sum_probs=8.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHh
Q 026791 29 QRLKTAVTISAIVLLTLIIGLM 50 (233)
Q Consensus 29 k~~~~i~~~s~illv~~~~~~~ 50 (233)
+|+ ++ +|.+++++.+++|++
T Consensus 6 ~KL-~~-~f~~~~~l~~~~~~~ 25 (181)
T PF12729_consen 6 TKL-IL-GFGLIILLLLIVGIV 25 (181)
T ss_pred HHH-HH-HHHHHHHHHHHHHHH
Confidence 455 33 344444444444443
No 30
>PF10858 DUF2659: Protein of unknown function (DUF2659); InterPro: IPR022588 This bacterial family of proteins has no known function.
Probab=36.23 E-value=74 Score=26.43 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=33.0
Q ss_pred hhHHHHccCCCC--CChhchhHHhccccCCCCCCCCCChHHHHHH---HHHHHHHHHHHHHHHHHh
Q 026791 68 AAESIKTVCSVT--QNPDSCFTALSSSLNISSTTTKPDPEVILKL---SLQVNVNHFSNITSSIKS 128 (233)
Q Consensus 68 ~~~~i~~~C~~T--~yp~~C~~sL~~~~~s~~~~~~~~~~~l~~~---sl~~t~~~~~~a~~~~~~ 128 (233)
..-.|+++=.-| .+.++-+.+|...... +.+..++++.. +++.....-..+.....+
T Consensus 57 gDI~vkti~ldt~~~N~eLa~~tLEnLvt~----snTKikEiA~leqva~kis~~~~~eaK~Llnk 118 (220)
T PF10858_consen 57 GDIFVKTIGLDTTKNNSELAFNTLENLVTN----SNTKIKEIAALEQVAIKISEKKYSEAKQLLNK 118 (220)
T ss_pred cceeeeecccccccCcHHHHHHHHHHHHHc----cchHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 344666666666 7888999999876544 45556666554 344444443444444433
No 31
>PRK07021 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=32.27 E-value=59 Score=26.15 Aligned_cols=21 Identities=10% Similarity=0.113 Sum_probs=9.7
Q ss_pred cccchhhHHHHHHHHHHHHHHH
Q 026791 26 RTHQRLKTAVTISAIVLLTLII 47 (233)
Q Consensus 26 ~~~k~~~~i~~~s~illv~~~~ 47 (233)
.++|++ +++++..+++++..+
T Consensus 13 g~kkkl-~ii~l~~l~l~~~g~ 33 (162)
T PRK07021 13 GKKRKL-WLIILILLLLAAAAG 33 (162)
T ss_pred CCccch-hHHHHHHHHHHHHHH
Confidence 344566 554444444444333
No 32
>PRK05696 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=30.97 E-value=38 Score=27.50 Aligned_cols=19 Identities=16% Similarity=0.412 Sum_probs=7.9
Q ss_pred cccchhhHHHHHHHHHHHH
Q 026791 26 RTHQRLKTAVTISAIVLLT 44 (233)
Q Consensus 26 ~~~k~~~~i~~~s~illv~ 44 (233)
+++|++++|+++.+++|++
T Consensus 15 ~~kkkliiii~~~~lll~~ 33 (170)
T PRK05696 15 KSKKKLIIIIVIGVLLALG 33 (170)
T ss_pred CCceeEEeeHHHHHHHHHH
Confidence 3344432444444444443
No 33
>PRK11376 hlyE hemolysin E; Provisional
Probab=28.15 E-value=86 Score=27.06 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhHHh--hhhcccccChhhHHHHHHHHhccHHHHHH
Q 026791 143 DQLRDASSRLNDSMSE--LNATLTDRTVNDIQTWISAAMTDEETCLD 187 (233)
Q Consensus 143 el~~~a~d~L~~s~~~--~~~~~~~~~~~D~~twLSAAlt~q~TC~D 187 (233)
.-++++++++.+++.. +.. ....+++++.+|.|-...+-|.+
T Consensus 38 ~eLQeAIdeIDRaMlgYqG~A---K~~Ld~IRsLnSdAr~kYqecV~ 81 (303)
T PRK11376 38 QTFDETIKELSRFKQEYSQAA---SVLVGDIKTLLMDSQDKYFEATQ 81 (303)
T ss_pred HHHHHHHHHHHHHhhhhhhHH---HHhhhHHHHHHHHHHHHHHHhhH
Confidence 4578899999999865 221 45689999999998777777764
No 34
>PRK09634 nusB transcription antitermination protein NusB; Provisional
Probab=26.05 E-value=4.1e+02 Score=22.50 Aligned_cols=54 Identities=24% Similarity=0.322 Sum_probs=40.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHhhhhcccccChhhHHHHHHHHhccHHHHHHhhhh
Q 026791 132 NHLEVALRDCVDQLRDASSRLNDSMSELNATLTDRTVNDIQTWISAAMTDEETCLDGLEE 191 (233)
Q Consensus 132 ~~~k~AL~dC~el~~~a~d~L~~s~~~~~~~~~~~~~~D~~twLSAAlt~q~TC~Dgf~~ 191 (233)
...+..|+.|..-++.+-++|-+|-. ...+...+++.|..+++-.++-++|...
T Consensus 43 ~~~~~~l~~~~~el~~~~~~l~~s~~------~~~~~~~~r~~l~~~~~~~~~~~ng~s~ 96 (207)
T PRK09634 43 QEVRETLDTAAAELERAQQRLLDSEG------DASDLESARTMLQEALTLAETAINRLSA 96 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc------cccchHHHHHHHHHHHHHHHHHHccccH
Confidence 34456777777777777777665532 2567889999999999999999999864
No 35
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=24.14 E-value=2.2e+02 Score=18.84 Aligned_cols=28 Identities=18% Similarity=0.401 Sum_probs=22.4
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 026791 130 YGNHLEVALRDCVDQLRDASSRLNDSMS 157 (233)
Q Consensus 130 ~d~~~k~AL~dC~el~~~a~d~L~~s~~ 157 (233)
+++.+..+++.|.+-|-++-..+.+.+.
T Consensus 37 L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 37 LSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999888776654
No 36
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=24.00 E-value=66 Score=27.47 Aligned_cols=6 Identities=17% Similarity=0.069 Sum_probs=2.7
Q ss_pred HHHHHH
Q 026791 33 TAVTIS 38 (233)
Q Consensus 33 ~i~~~s 38 (233)
+|++|+
T Consensus 19 aI~IV~ 24 (217)
T PF07423_consen 19 AIGIVS 24 (217)
T ss_pred HHHHHH
Confidence 444444
No 37
>TIGR01495 ETRAMP Plasmodium ring stage membrane protein ETRAMP. These genes have been shown to be found in the sub-telomeric regions of both P. falciparum and P. yoelii chromosomes.
Probab=23.97 E-value=53 Score=23.82 Aligned_cols=13 Identities=8% Similarity=0.243 Sum_probs=5.9
Q ss_pred ccchhhHHHHHHH
Q 026791 27 THQRLKTAVTISA 39 (233)
Q Consensus 27 ~~k~~~~i~~~s~ 39 (233)
++|+.++++++++
T Consensus 47 knkK~i~iS~ias 59 (85)
T TIGR01495 47 KNKKIILYSSIAS 59 (85)
T ss_pred hcCceeehHHHHH
Confidence 4444425554443
No 38
>PF01093 Clusterin: Clusterin; InterPro: IPR000753 Clusterin is a vertebrate glycoprotein [], the exact function of which is not yet clear. Clusterin expression is complex, appearing as different forms in different cell compartments. One set of proteins is directed for secretion, and other clusterin species are expressed in the cytoplasm and nucleus. The secretory form of the clusterin protein (sCLU) is targeted to the ER by an initial leader peptide. This ~60kDa pre-sCLU protein is further glycosylated and proteolytically cleaved into alpha- and beta-subunits, held together by disulphide bonds. External sCLU is an 80kDa protein and may act as a molecular chaperone, scavenging denatured proteins outside cells following specific stress-induced injury such as heat shock. sCLU possesses nonspecific binding activity to hydrophobic domains of various proteins in vitro []. A specific nuclear form of CLU (nCLU) acts as a pro-death signal, inhibiting cell growth and survival. The nCLU protein has two coiled-coil domains, one at its N terminus that is unable to bind Ku70, and a C-terminal coiled-coil domain that is uniquely able to associate with Ku70 and is minimally required for cell death. Clusterin is synthesized as a precursor polypeptide of about 400 amino acids which is post-translationally cleaved to form two subunits of about 200 amino acids each. The two subunits are linked by five disulphide bonds to form an antiparallel ladder-like structure []. In each of the mature subunits the five cysteines that are involved in disulphide bonds are clustered in domains of about 30 amino acids located in the central part of the subunits. This entry represents the clusterin precursor and related proteins.; GO: 0008219 cell death
Probab=23.60 E-value=3e+02 Score=26.07 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhhh-------cccccChhhHHHHH-HHHhccHH-HHHHhhh
Q 026791 134 LEVALRDCVDQLRDASSRLNDSMSELNA-------TLTDRTVNDIQTWI-SAAMTDEE-TCLDGLE 190 (233)
Q Consensus 134 ~k~AL~dC~el~~~a~d~L~~s~~~~~~-------~~~~~~~~D~~twL-SAAlt~q~-TC~Dgf~ 190 (233)
.-..|+-|.+-.++|+...++.-..+.. ++ ..--+.-+--| ++.|.+.. ||.-||.
T Consensus 42 Lm~tL~k~kk~KeeAl~l~~e~e~kLee~e~~Cn~sm-~~lWeECkpCL~~tCm~FYt~tCr~g~~ 106 (436)
T PF01093_consen 42 LMKTLEKSKKEKEEALKLANEVEEKLEEEEEVCNESM-MALWEECKPCLKQTCMRFYTRTCRSGSG 106 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHhcccCCCch
Confidence 3478999999999988877666544321 11 11123333334 67888888 9999886
No 39
>PRK07718 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=23.48 E-value=1.3e+02 Score=23.63 Aligned_cols=9 Identities=11% Similarity=0.456 Sum_probs=4.4
Q ss_pred cchhhHHHHH
Q 026791 28 HQRLKTAVTI 37 (233)
Q Consensus 28 ~k~~~~i~~~ 37 (233)
+||+ +++.+
T Consensus 2 kkkl-~~i~~ 10 (142)
T PRK07718 2 KNKL-IKIML 10 (142)
T ss_pred cchH-HHHHH
Confidence 4566 44433
No 40
>PF03487 IL13: Interleukin-13; InterPro: IPR020470 Interleukin-13 (IL-13) is a pleiotropic cytokine which may be important in the regulation of the inflammatory and immune responses []. It inhibits inflammatory cytokine production and synergises with IL-2 in regulating interferon-gamma synthesis. The sequences of IL-4 and IL-13 are distantly related.; PDB: 3G6D_A 3L5W_J 3BPO_A 1GA3_A 1IK0_A 3L5X_A 3L5Y_A 1IJZ_A 3LB6_B.
Probab=21.52 E-value=1.1e+02 Score=19.01 Aligned_cols=17 Identities=35% Similarity=0.913 Sum_probs=0.0
Q ss_pred HHHHHHhccHHHHHHhhhh
Q 026791 173 TWISAAMTDEETCLDGLEE 191 (233)
Q Consensus 173 twLSAAlt~q~TC~Dgf~~ 191 (233)
-||..++. -||+-|+..
T Consensus 3 lwlt~via--ltClggLas 19 (43)
T PF03487_consen 3 LWLTVVIA--LTCLGGLAS 19 (43)
T ss_dssp -------------------
T ss_pred HHHHHHHH--HHHhcccCC
Confidence 48888876 799999975
No 41
>PRK11677 hypothetical protein; Provisional
Probab=21.27 E-value=85 Score=24.74 Aligned_cols=14 Identities=21% Similarity=0.323 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHhh
Q 026791 38 SAIVLLTLIIGLML 51 (233)
Q Consensus 38 s~illv~~~~~~~~ 51 (233)
.+.|+|+++||+++
T Consensus 7 ~i~livG~iiG~~~ 20 (134)
T PRK11677 7 LIGLVVGIIIGAVA 20 (134)
T ss_pred HHHHHHHHHHHHHH
Confidence 35556777777765
No 42
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=21.09 E-value=1.2e+02 Score=19.74 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHhheeeec
Q 026791 33 TAVTISAIVLLTLIIGLMLAVLIR 56 (233)
Q Consensus 33 ~i~~~s~illv~~~~~~~~~~~~~ 56 (233)
+++.+|+++.+..++++..++.++
T Consensus 6 ~LIpiSl~l~~~~l~~f~Wavk~G 29 (51)
T TIGR00847 6 ILIPISLLLGGVGLVAFLWSLKSG 29 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccC
Confidence 556777777666666666665543
No 43
>PF10749 DUF2534: Protein of unknown function (DUF2534); InterPro: IPR019685 This entry represents proteins with unknown function, and appear to be restricted to Enterobacteriaceae.
Probab=20.53 E-value=1.2e+02 Score=21.90 Aligned_cols=14 Identities=0% Similarity=0.055 Sum_probs=6.5
Q ss_pred cccchhhHHHHHHHH
Q 026791 26 RTHQRLKTAVTISAI 40 (233)
Q Consensus 26 ~~~k~~~~i~~~s~i 40 (233)
|..||+ ++++..+.
T Consensus 10 ~~~kkF-l~~l~~vf 23 (85)
T PF10749_consen 10 KEGKKF-LLALAIVF 23 (85)
T ss_pred hhhhHH-HHHHHHHH
Confidence 344566 55433333
No 44
>PF03100 CcmE: CcmE; InterPro: IPR004329 CcmE is the product of one of a cluster of Ccm genes that are necessary for cytochrome c biosynthesis in eubacteria. Expression of these proteins is induced when the organisms are grown under anaerobic conditions with nitrate or nitrite as the final electron acceptor.; GO: 0017003 protein-heme linkage, 0017004 cytochrome complex assembly, 0005886 plasma membrane; PDB: 1SR3_A 2KCT_A 1J6Q_A 1LM0_A.
Probab=20.40 E-value=39 Score=26.26 Aligned_cols=6 Identities=50% Similarity=0.850 Sum_probs=0.0
Q ss_pred cccchh
Q 026791 26 RTHQRL 31 (233)
Q Consensus 26 ~~~k~~ 31 (233)
+++||+
T Consensus 3 ~~~~rl 8 (131)
T PF03100_consen 3 RRKKRL 8 (131)
T ss_dssp ------
T ss_pred cceeeh
Confidence 455565
Done!