BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026796
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1Q1|TL225_ARATH Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis
thaliana GN=At1g12250 PE=1 SV=1
Length = 280
Score = 249 bits (637), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/222 (67%), Positives = 174/222 (78%), Gaps = 8/222 (3%)
Query: 1 MALSSISPLSIKSLNFCSSSSKGPYQLHALSKPLWVACQISSKTESDGQFPDCSNNQ--- 57
MA SS+SPL +KSL+ SSS + + L Q+SS+ S+ + D SN +
Sbjct: 1 MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSR--SNLEIKDSSNTREGC 58
Query: 58 CAGPYAKLKNWRVFVSTALAAAVVASCSSNISALADLNKYEAETRGEFGIGSAAQFGSAD 117
C+ A+ W+ +S A+AAAV+AS SS + A+A+LN++EA+TRGEFGIGSAAQ+GSAD
Sbjct: 59 CSS--AESNTWKRILSAAMAAAVIAS-SSGVPAMAELNRFEADTRGEFGIGSAAQYGSAD 115
Query: 118 LRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMV 177
L K VH ENFRRANFTSADMRESDFSGS FNGAYLEKAVAYKANF+GADLSDTLMDRMV
Sbjct: 116 LSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMV 175
Query: 178 LNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQ 219
LNEANLTNAVLVR+VLTRSDLGGA IEGADFSDAVIDL QKQ
Sbjct: 176 LNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQ 217
>sp|Q52118|YMO3_ERWST Uncharacterized protein in mobD 3'region OS=Erwinia stewartii PE=4
SV=1
Length = 295
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKA---VAY--KANF 163
S A +ADL++A N A+ T+A++ ++D +GA L A +AY +A+
Sbjct: 170 SNANLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADL 229
Query: 164 TGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADF 208
+ A+LS+ + R L++ANL++A L L R+DL AI++GA+
Sbjct: 230 SNANLSNADLKRADLSDANLSDANLTNVDLKRADLSNAILKGANL 274
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADL 168
S A A+L A N A + AD+ ++ SG+ A L + N +GA+L
Sbjct: 95 SDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLTNANLNQTDLPNVNLSGANL 154
Query: 169 SDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVID 214
+ + L+EA+L+NA L L R+DL A + GAD ++A ++
Sbjct: 155 AHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLN 200
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKA-----NF 163
S A A+L A + + AN ++AD++ +D S + +GA L A + N
Sbjct: 150 SGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNL 209
Query: 164 TGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQV 220
+GA+L+ + L+EA+L+NA L L R+DL A + A+ ++ +DL + +
Sbjct: 210 SGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDANLTN--VDLKRADL 264
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
A DL N AN T A + E+D S + + A L++A AN +GADL++
Sbjct: 137 ANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTN 196
Query: 171 TLMDRM----------VLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDA 211
+++ L ANLT A L L+ ++L A ++ AD SDA
Sbjct: 197 ANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDA 247
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
A ADL A + AN D+ + SG+ A L A +A+ + A+LS+
Sbjct: 117 AYLSEADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSN 176
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLA 216
+ R L+ ANL+ A L L ++DL + GA+ + A + +A
Sbjct: 177 ADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMA 222
>sp|Q55837|Y516_SYNY3 Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0516 PE=4 SV=1
Length = 166
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 186
+ R N +A + SD SG+ +G L +A+ +AN TGA+LS+T + L EANL A
Sbjct: 49 DLREFNLENARLNRSDLSGANLSGVNLRRALLDRANLTGANLSETDLTEAALTEANLAGA 108
Query: 187 VLVRTVLTRS-----DLGGAIIEGADFS 209
L L RS DL GA ++GA+ +
Sbjct: 109 DLSGANLERSFLRDVDLTGANLKGANLA 136
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 132 NFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRT 191
N AD+RE FN LE A +++ +GA+LS + R +L+ ANLT A L T
Sbjct: 44 NLAGADLRE-------FN---LENARLNRSDLSGANLSGVNLRRALLDRANLTGANLSET 93
Query: 192 VLTRSDLGGAIIEGADFSDAVID 214
LT + L A + GAD S A ++
Sbjct: 94 DLTEAALTEANLAGADLSGANLE 116
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADL 168
S A +LR+A+ RAN T A++ E+D + +A +AN GADL
Sbjct: 66 SGANLSGVNLRRAL-----LDRANLTGANLSETDLT----------EAALTEANLAGADL 110
Query: 169 SDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDA 211
S ++R L + +LT A L L ++L A + D +A
Sbjct: 111 SGANLERSFLRDVDLTGANLKGANLAWANLTAANLTDVDLEEA 153
>sp|P81760|TL17_ARATH Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=At5g53490 PE=1 SV=2
Length = 236
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 125 KENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLT 184
+ N + ++A M + F G+ + KA A +A+F G + ++ ++DR+ ++NL
Sbjct: 123 QTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLK 182
Query: 185 NAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
AV TVL+ S A +E F D +I
Sbjct: 183 GAVFRNTVLSGSTFEEANLEDVVFEDTII 211
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 137 DMRESDFSGSKFN--GAYLEKAVAYKANFTGADLSDTLMDRMVLNEA-----NLTNAVLV 189
D+R D++ + N G L A+ A F GAD+++ +M + EA N TNAV+
Sbjct: 113 DLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVID 172
Query: 190 RTVLTRSDLGGA-----IIEGADFSDAVID 214
R +S+L GA ++ G+ F +A ++
Sbjct: 173 RVNFGKSNLKGAVFRNTVLSGSTFEEANLE 202
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 110 AAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLS 169
A+F AD+ + V K A E+ F G F A +++ K+N GA
Sbjct: 138 GAKFDGADMTEVVMSK----------AYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFR 187
Query: 170 DTLMDRMVLNEANLTNAVLVRTVLTRSDL 198
+T++ EANL + V T++ DL
Sbjct: 188 NTVLSGSTFEEANLEDVVFEDTIIGYIDL 216
>sp|P73709|Y1819_SYNY3 Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1819 PE=4 SV=1
Length = 331
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADL 168
S A+ + + + A+ N R N T S+ S ++ N A L +A KAN A+L
Sbjct: 229 SEAEMTAVNCQGAIMTHVNLNRTNLTG-----SNLSFTRMNSADLSRANLTKANLQEAEL 283
Query: 169 SDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
+ R L EAN NA LVR L +++ GA +GA D +
Sbjct: 284 IEAFFARANLTEANFINANLVRADLMSANMVGADFQGATMPDGQV 328
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 100 ETRGEFGIGSAAQFGSADLR----KAVHVKE------NFRRANFTSADMRESDFSGSKFN 149
E +G + AA G ADL+ K V + N + AN D+R++D S +
Sbjct: 140 EKKGYYTNLQAAILGRADLQGANMKGVDLSRADLSYANLKEANLRDVDLRKADLSYANLK 199
Query: 150 GAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLT-----NAVLVRTVLTRSDLGGA--- 201
GA L A A GADL + + R ++EA +T A++ L R++L G+
Sbjct: 200 GALLTDANLSGAKLNGADLQNANLMRAKISEAEMTAVNCQGAIMTHVNLNRTNLTGSNLS 259
Query: 202 --IIEGADFSDAVIDLAQKQVGSKTSYFF 228
+ AD S A + A Q FF
Sbjct: 260 FTRMNSADLSRANLTKANLQEAELIEAFF 288
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 23/135 (17%)
Query: 98 EAETRGE---FGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAY-- 152
EA+ RG F + A G A+L A + +A+ AD+R ++F G+ GA
Sbjct: 39 EADLRGANLLFCYLNRANLGQANLVAANLSGASLNQADLAGADLRSANFHGAMLQGAILR 98
Query: 153 --------LEKAVAYKANFTGADLSDTLMDRMVLNEANL--------TNAVLVRTVLTRS 196
L+ A+ GADLS + L AN+ TN L +L R+
Sbjct: 99 DSDMTLATLQDTNLIGADLRGADLSGATLTGACLRGANMRQEKKGYYTN--LQAAILGRA 156
Query: 197 DLGGAIIEGADFSDA 211
DL GA ++G D S A
Sbjct: 157 DLQGANMKGVDLSRA 171
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 109 SAAQFGSADLRKAVHVKENFRRANFTSAD----------MRESDFSGSKFNGAYLEKAVA 158
S A+ ADL+ A ++ A T+ + + ++ +GS + + A
Sbjct: 209 SGAKLNGADLQNANLMRAKISEAEMTAVNCQGAIMTHVNLNRTNLTGSNLSFTRMNSADL 268
Query: 159 YKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
+AN T A+L + + ANLT A + L R+DL A + GADF A +
Sbjct: 269 SRANLTKANLQEAELIEAFFARANLTEANFINANLVRADLMSANMVGADFQGATM 323
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 113 FGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTL 172
ADLR A + RAN A++ ++ SG+ N A L A ANF GA L +
Sbjct: 37 LNEADLRGANLLFCYLNRANLGQANLVAANLSGASLNQADLAGADLRSANFHGAMLQGAI 96
Query: 173 MDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGA 206
+ + A L + L+ L +DL GA + GA
Sbjct: 97 LRDSDMTLATLQDTNLIGADLRGADLSGATLTGA 130
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 140 ESDFSGSKFNGAYLEKA-----VAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLT 194
E+ F+G K G LE A V +A+ GA+L ++R L +ANL A L L
Sbjct: 14 ETLFTGLKLPGINLEAADLIGIVLNEADLRGANLLFCYLNRANLGQANLVAANLSGASLN 73
Query: 195 RSDLGGAIIEGADFSDAVI 213
++DL GA + A+F A++
Sbjct: 74 QADLAGADLRSANFHGAML 92
>sp|Q9SE95|FIP2_ARATH FH protein interacting protein FIP2 OS=Arabidopsis thaliana GN=FIP2
PE=1 SV=1
Length = 298
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 112 QFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDT 171
+F SA+LR A+ N + AN A + F G+ A+L+ A AN GA+L
Sbjct: 192 EFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHLQNADLTNANLEGANLEGA 251
Query: 172 LMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDA 211
+ L+ AN A L R L +L A +EGA+ A
Sbjct: 252 NLKGAKLSNANFKGANLQRAYLRHVNLREAHMEGANLGGA 291
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
A+F +AD ++ R FTSA++R + +G+ A L+ A +F GADL
Sbjct: 171 AKFRNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRT 230
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDA 211
L A+LTNA L L ++L GA + A+F A
Sbjct: 231 A-----HLQNADLTNANLEGANLEGANLKGAKLSNANFKGA 266
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 128 FRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAV 187
F R N A R +D GS F+ A L + AN GA L+ T L ANL +A
Sbjct: 163 FSRTNLQCAKFRNADAEGSIFHNAILRECEFTSANLRGALLAGT-----NLQSANLQDAC 217
Query: 188 LVRTVLTRSDLGGAIIEGADFSDAVID 214
LV +DL A ++ AD ++A ++
Sbjct: 218 LVGCSFCGADLRTAHLQNADLTNANLE 244
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 99 AETRGEFGIGSAAQFGSADLRKAVHVKENF-----RRANFTSADMRESDFSGSKFNGAYL 153
A RG G+ Q SA+L+ A V +F R A+ +AD+ ++ G+ GA L
Sbjct: 196 ANLRGALLAGTNLQ--SANLQDACLVGCSFCGADLRTAHLQNADLTNANLEGANLEGANL 253
Query: 154 EKAVAYKANFTGADLSDTLMDRMVLNEA----------NLTNAV 187
+ A ANF GA+L + + L EA N+T A+
Sbjct: 254 KGAKLSNANFKGANLQRAYLRHVNLREAHMEGANLGGANMTGAI 297
>sp|P74297|SPKB_SYNY3 Serine/threonine-protein kinase B OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=spkB PE=1 SV=1
Length = 574
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 71 FVSTALAAAVVASCSSNISALADLNKYEAETRGEFGIGSAAQFGSADLRKAVHVKENFRR 130
V LA A V + + L + N +AE + A FG A L+ + N
Sbjct: 456 LVGIVLAKAFVPGINCYQANLTNANFEQAEL-------TRADFGKARLKNVIFKGANLSD 508
Query: 131 ANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADL 168
A F AD+R +D G+ NG + A ANF+GADL
Sbjct: 509 AYFGYADLRGADLRGANLNGVNFKYANLQGANFSGADL 546
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 186
N +AN T+A+ +++ + + F A L+ + F GA+LSD L A+L A
Sbjct: 470 NCYQANLTNANFEQAELTRADFGKARLKNVI-----FKGANLSDAYFGYADLRGADLRGA 524
Query: 187 VLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQVGSKTSY 226
L ++L GA GAD A + Q ++ +KT++
Sbjct: 525 NLNGVNFKYANLQGANFSGADLGSAKVSPEQLKL-AKTNW 563
>sp|Q8ZMM8|PIPB2_SALTY Secreted effector protein pipB2 OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=pipB2 PE=1 SV=1
Length = 350
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 114 GSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLM 173
G +L+ AV AN TS ++ ++D SG+ GA L A ANF GA+LS T
Sbjct: 150 GGMNLKGAV-----LTGANLTSENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT-- 202
Query: 174 DRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
L ++N NA L +++ + L A + GA+ A +
Sbjct: 203 ---SLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASL 239
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAY-----KANFTG 165
A A+L AV + ANF A++ + S F A LE ++ AN TG
Sbjct: 172 ADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTG 231
Query: 166 ADLSDTLMDRMVLNEANLTNAVLVRT-----VLTRSDLGGAIIEGADFSDAVID 214
A+L + + E N + A + T L R+D+ GA ++GA A+++
Sbjct: 232 ANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIME 285
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 116 ADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDT---- 171
A L A N + A+ M E + SG+ + L A +A+ +GA L
Sbjct: 222 ATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMA 281
Query: 172 -LMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI-DLAQKQVGSKTS 225
+M+ VL ANL A + T L +DL A + F D + DL + TS
Sbjct: 282 AIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTDLRTEDATMSTS 337
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
+ F +A L ++ AN T A+++ + G A N +GA L
Sbjct: 207 SNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIR 266
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAI-----IEGADFSDAVID 214
M L A + A++ VLTR++L A ++GAD ++A ++
Sbjct: 267 ADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLN 315
>sp|Q8Z4G9|PIPB2_SALTI Secreted effector protein pipB2 OS=Salmonella typhi GN=pipB2 PE=3
SV=1
Length = 350
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 35/136 (25%)
Query: 114 GSADLRKAVHVKENFRRANFTSADMRESDFSGS----------KFNGAYLEKAVAYKANF 163
G +L+ AV N N AD+ +D G+ F GA L A +N
Sbjct: 150 GGMNLKGAVLTGANLTAENLCDADLSGADLEGAILFMADCDGANFKGANLSGASLGDSNL 209
Query: 164 TGADLSDTLMDRMVLNEANLTNAVLVRT-------------------------VLTRSDL 198
T A L D++M L+ ANLT A L T L R+D+
Sbjct: 210 TNACLEDSIMCGATLDRANLTGANLQHTSLLGCSMVECNCSGANMDHANVSGSTLIRADM 269
Query: 199 GGAIIEGADFSDAVID 214
GA ++GA A+++
Sbjct: 270 SGATLKGATIMAAIME 285
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAY-----KANFTG 165
A ADL A+ + ANF A++ + S A LE ++ +AN TG
Sbjct: 172 ADLSGADLEGAILFMADCDGANFKGANLSGASLGDSNLTNACLEDSIMCGATLDRANLTG 231
Query: 166 ADLSDT--LMDRMV--------LNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDL 215
A+L T L MV ++ AN++ + L+R ++ + L GA I A AV+
Sbjct: 232 ANLQHTSLLGCSMVECNCSGANMDHANVSGSTLIRADMSGATLKGATIMAAIMEGAVLTR 291
Query: 216 AQKQVGSKTS 225
A Q S T+
Sbjct: 292 ANLQKASFTA 301
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 22/145 (15%)
Query: 109 SAAQFGSADLRKA-----VHVKENFRRANFTSAD----------MRESDFSGSKFNGAYL 153
S A G ++L A + RAN T A+ M E + SG+ + A +
Sbjct: 200 SGASLGDSNLTNACLEDSIMCGATLDRANLTGANLQHTSLLGCSMVECNCSGANMDHANV 259
Query: 154 EKAVAYKANFTGADLSD-----TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADF 208
+ +A+ +GA L +M+ VL ANL A T L +DL A + F
Sbjct: 260 SGSTLIRADMSGATLKGATIMAAIMEGAVLTRANLQKASFTATNLDGADLSEANLRNTSF 319
Query: 209 SDAVI-DL-AQKQVGSKTSYFFFNI 231
D + DL + S ++ FN+
Sbjct: 320 KDCTLTDLRTEDATMSTSTQTLFNV 344
>sp|Q57KZ6|PIPB2_SALCH Secreted effector protein pipB2 OS=Salmonella choleraesuis (strain
SC-B67) GN=pipB2 PE=3 SV=1
Length = 350
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 114 GSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLM 173
G +L+ AV AN T+ ++ ++D SG+ GA L A ANF GA+LS T
Sbjct: 150 GGMNLKGAV-----LTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT-- 202
Query: 174 DRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
L ++N NA L +++ + L A + GA+ A +
Sbjct: 203 ---SLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASL 239
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAY-----KANFTG 165
A A+L AV + ANF A++ + S F A LE ++ AN TG
Sbjct: 172 ADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTG 231
Query: 166 ADL--SDTLMDRMV--------LNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
A+L + L M+ ++ NL+ A L+R ++ + L GA I A DAV+
Sbjct: 232 ANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEDAVL 289
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 116 ADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD----- 170
A L A N + A+ M E + SG+ + L A +A+ +GA L
Sbjct: 222 ATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMA 281
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
+M+ VL ANL A + T L +DL A + F D +
Sbjct: 282 AIMEDAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTL 324
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 186
N A ADM + G+ A +E AV +AN A T +D L EANL N
Sbjct: 258 NLSGATLIRADMSGATLQGATIMAAIMEDAVLTRANLRKASFISTNLDGADLAEANLNNT 317
Query: 187 VLVRTVLTR 195
LT
Sbjct: 318 CFKDCTLTH 326
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
+ F +A L ++ AN T A+++ + G A N +GA L
Sbjct: 207 SNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIR 266
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAI-----IEGADFSDAVID 214
M L A + A++ VLTR++L A ++GAD ++A ++
Sbjct: 267 ADMSGATLQGATIMAAIMEDAVLTRANLRKASFISTNLDGADLAEANLN 315
>sp|P73063|Y1851_SYNY3 Uncharacterized protein slr1851 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1851 PE=4 SV=1
Length = 162
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSD 170
AQ SA L+ A N AD+ +D SG+ GA L A A GADL
Sbjct: 53 AQLDSATLKNANLALANMTEVCLIYADLSNADLSGANLVGADLTNADLSGAKLGGADLRK 112
Query: 171 TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSD-AVIDL 215
+ L A+L L+ LT +D A + GA SD AVI++
Sbjct: 113 ANLSEASLRGADLRGVNLIEANLTNTDFSEADLTGAYISDGAVINV 158
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 114 GSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLM 173
G D V+ A+ A + D G+ A L+ A AN A++++ +
Sbjct: 16 GQRDFSHINLVRVCLSNASLIGAQLIFVDLGGANLTRAQLDSATLKNANLALANMTEVCL 75
Query: 174 DRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDA 211
L+ A+L+ A LV LT +DL GA + GAD A
Sbjct: 76 IYADLSNADLSGANLVGADLTNADLSGAKLGGADLRKA 113
>sp|Q5PEX4|PIPB2_SALPA Secreted effector protein pipB2 OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=pipB2 PE=3 SV=1
Length = 350
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 114 GSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLM 173
G +L+ AV AN T+ ++ ++D SG+ GA L A ANF GA+LS T
Sbjct: 150 GGMNLKGAV-----LTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT-- 202
Query: 174 DRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
L ++N NA L ++ + L A + GA+ A +
Sbjct: 203 ---SLGDSNFKNACLEDGIMCGATLDHANLTGANLQHASL 239
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAY-----KANFTG 165
A A+L AV + ANF A++ + S F A LE + AN TG
Sbjct: 172 ADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDGIMCGATLDHANLTG 231
Query: 166 ADL--SDTLMDRMV--------LNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
A+L + L M+ ++ NL+ A L+R ++ + L GA I A DAV+
Sbjct: 232 ANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEDAVL 289
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 104 EFGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANF 163
E GI A A+L A N + A+ M E + SG+ + L A +A+
Sbjct: 215 EDGIMCGATLDHANLTGA-----NLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADM 269
Query: 164 TGADLSD-----TLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVI 213
+GA L +M+ VL ANL A + T L +DL A + F D +
Sbjct: 270 SGATLQGATIMAAIMEDAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTL 324
Score = 34.3 bits (77), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 186
N A ADM + G+ A +E AV +AN A T +D L EANL N
Sbjct: 258 NLSGATLIRADMSGATLQGATIMAAIMEDAVLTRANLRKASFISTNLDGADLAEANLNNT 317
Query: 187 VLVRTVLTR 195
LT
Sbjct: 318 CFKDCTLTH 326
>sp|O22160|TL15A_ARATH Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis
thaliana GN=At2g44920 PE=1 SV=2
Length = 224
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 130 RANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLM---DRMVLN--EANLT 184
R +F ++ +R+++F G+K GA + A+ TGADLS+ + D + N + NLT
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASF-----FDADLTGADLSEADLRGADFSLANVTKVNLT 164
Query: 185 NAVLV-RTVLTRSDLGGAIIEGADFSDAVIDLAQK 218
NA L TV + G+ I GADF+D + Q+
Sbjct: 165 NANLEGATVTGNTSFKGSNITGADFTDVPLRDDQR 199
>sp|P74221|Y1152_SYNY3 Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1152 PE=4 SV=1
Length = 331
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMR-----ESDFSGSKFNGAYLEKAVAYKANFTG 165
A F A+L++A N R A + D+R E D S +G ++ A TG
Sbjct: 170 ADFSWANLQEACLSLANLRDARLWATDLRRAFMKEMDLSALSLHGLAMDGA-----KLTG 224
Query: 166 ADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAV 212
+ L DT + L ANL A L LT DL GA + GA+ + V
Sbjct: 225 SCLRDTNLSHSSLRGANLRGADLTGANLTGVDLTGADLMGANLTQVV 271
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 123 HVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEAN 182
H + N+ A+ T A + ++D S + A L A A K NF GA LS L AN
Sbjct: 89 HCQMNW--ADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGA-----TLAHAN 141
Query: 183 LTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQ 219
L A L +T LT ++L A + A+F A A Q
Sbjct: 142 LRGANLEQTNLTGANLFAANLREANFQKADFSWANLQ 178
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 131 ANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVR 190
A T + +R+++ S S GA L A + TGA+L+ +LT A L+
Sbjct: 220 AKLTGSCLRDTNLSHSSLRGANLRGA-----DLTGANLTGV----------DLTGADLMG 264
Query: 191 TVLTRSDLGGAIIEGADFSDAVID 214
LT+ A++EG ++ +A+ D
Sbjct: 265 ANLTQVVWHDAVVEGVNWEEAIAD 288
>sp|Q8ZQ59|PIPB_SALTY Secreted effector protein PipB OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=pipB PE=2 SV=1
Length = 291
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 126 ENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTN 185
E+ + + ++AD RE+ S GA L A + N G++++ + L AN++
Sbjct: 169 EDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSG 228
Query: 186 AVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQVGS 222
L +L SDL + GA + LA+ G+
Sbjct: 229 VNLTAAILFGSDLTDTKLNGAKLDKIALTLAKALTGA 265
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 116 ADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEK-AVAYKANFTGADLS 169
A+L A N N T+A + SD + +K NGA L+K A+ TGADL+
Sbjct: 214 ANLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTLAKALTGADLT 268
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 186
N R N D + D S + A + N GA+L + + L +N+T A
Sbjct: 155 NLRGVNLAHKDFQGEDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKA 214
Query: 187 VLVRTVLTRSDLGG-----AIIEGADFSDAVIDLAQ 217
L LT +++ G AI+ G+D +D ++ A+
Sbjct: 215 NLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAK 250
>sp|P05530|MCBG_ECOLX Protein McbG OS=Escherichia coli GN=mcbG PE=4 SV=1
Length = 187
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 111 AQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFT---GAD 167
F S L+K++ + FR F D+R+SDF+GS+FN + +F+ G D
Sbjct: 97 VDFISLRLQKSIFLSCRFRDCLFEETDLRKSDFTGSEFNNTEFRHSDLSHCDFSMTEGLD 156
Query: 168 LS 169
++
Sbjct: 157 IN 158
>sp|P85304|TL18_SPIOL Thylakoid lumenal 18.3 kDa protein (Fragment) OS=Spinacia oleracea
PE=1 SV=1
Length = 18
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 93 DLNKYEAETRGEFGIGSA 110
DLNK+EAE RGEFGI SA
Sbjct: 1 DLNKFEAEMRGEFGIXSA 18
>sp|Q58EE9|GFAP_DANRE Glial fibrillary acidic protein OS=Danio rerio GN=gfap PE=1 SV=2
Length = 444
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 162 NFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAII 203
NFT DT MD + EA++ +++VRTV TR G II
Sbjct: 395 NFTNLQFRDTSMDTKLTPEAHVKRSIVVRTVETRD---GEII 433
>sp|Q7L273|KCTD9_HUMAN BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens GN=KCTD9
PE=2 SV=1
Length = 389
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 162 NFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQ 219
NF+GADLS R+ L N A L R L ++L A +E AD S +V+D A Q
Sbjct: 224 NFSGADLS-----RLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQ 276
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 20/104 (19%)
Query: 127 NFRRANFTSADMRESDFSGSKFNGAYL--------------------EKAVAYKANFTGA 166
N AN A++ +D SGS + A L E KAN GA
Sbjct: 249 NLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCNFEDPSGLKANLEGA 308
Query: 167 DLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSD 210
+L M+ + NL A L L +L GA + G D +
Sbjct: 309 NLKGVDMEGSQMTGINLRVATLKNAKLKNCNLRGATLAGTDLEN 352
>sp|P37497|YYBG_BACSU Uncharacterized protein YybG OS=Bacillus subtilis (strain 168)
GN=yybG PE=4 SV=1
Length = 279
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 115 SADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGA-YLEKAVAYKAN 162
+ADLR A + R +F ADMR++D SG+ G+ +L +A AN
Sbjct: 218 AADLRNA-----DLRMTDFIGADMRDADLSGADLTGSIFLTQAQVNAAN 261
>sp|O06733|YISX_BACSU Uncharacterized protein YisX OS=Bacillus subtilis (strain 168)
GN=yisX PE=4 SV=1
Length = 212
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 20/112 (17%)
Query: 118 LRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMV 177
R V + +FR T + D S + F+GA + + ++ G ++++ + +
Sbjct: 55 FRNVVFIDVSFRHIELTDVIFEKCDLSNADFSGAVIHRTSVKQSKMVGMNVAEATLRNVS 114
Query: 178 LNEAN-------LTNAVLVR-------------TVLTRSDLGGAIIEGADFS 209
E + +N VR TVL ++ G +EGA F+
Sbjct: 115 FEECHGHFSSFSYSNMKQVRFDHCALMQSECSDTVLQQTHFDGCELEGASFT 166
>sp|P32704|YJCF_ECOLI Uncharacterized protein YjcF OS=Escherichia coli (strain K12)
GN=yjcF PE=4 SV=1
Length = 430
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 137 DMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANL 183
D+ S+F+G + A + YK NF A + L D +L+++N
Sbjct: 163 DLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSNF 209
>sp|Q80UN1|KCTD9_MOUSE BTB/POZ domain-containing protein KCTD9 OS=Mus musculus GN=Kctd9
PE=2 SV=1
Length = 339
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 31/80 (38%)
Query: 131 ANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVR 190
AN M S+ G+ E KAN GA+L M+ + NL A L
Sbjct: 223 ANLQGVKMLCSNAEGASLRLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKN 282
Query: 191 TVLTRSDLGGAIIEGADFSD 210
L +L GA + G D +
Sbjct: 283 AKLKNCNLRGATLAGTDLEN 302
>sp|P48677|GFAP_CARAU Glial fibrillary acidic protein (Fragment) OS=Carassius auratus
GN=gfap PE=2 SV=2
Length = 365
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 162 NFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAII 203
NFT DT +D + EA++ +++VRTV TR G II
Sbjct: 316 NFTNLQFRDTSLDTKLTPEAHVKRSIVVRTVETRD---GEII 354
>sp|Q6AAX3|PSTB_PROAC Phosphate import ATP-binding protein PstB OS=Propionibacterium
acnes (strain KPA171202 / DSM 16379) GN=pstB PE=3 SV=1
Length = 258
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 89 SALADLNKYEAETRGEFGIGSAAQFGSADLR----KAVHVKEN----FRRAN-FTSADMR 139
+ L LN+ G + G + DL V V+ N F+RAN F + +R
Sbjct: 45 TVLRTLNRMHEVIPGAYCTGKV-ELDGVDLYGKGVDPVAVRRNVGMVFQRANPFPAMSIR 103
Query: 140 ESDFSGSKFNGAYLEKAV--AYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRS 196
++ +G K NG K + A + + GA+L D + DR+ + A+L+ R + R+
Sbjct: 104 DNVVAGLKLNGVRDNKLLDEACEKSLRGANLWDEVKDRLERSGASLSGGQQQRLCIARA 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,666,742
Number of Sequences: 539616
Number of extensions: 2849817
Number of successful extensions: 7403
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7093
Number of HSP's gapped (non-prelim): 151
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)