Query 026801
Match_columns 233
No_of_seqs 174 out of 1485
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 12:55:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026801.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026801hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 2.1E-59 4.6E-64 410.3 27.1 231 1-233 92-349 (371)
2 PRK14296 chaperone protein Dna 100.0 5E-55 1.1E-59 390.5 30.1 230 2-233 103-360 (372)
3 PTZ00037 DnaJ_C chaperone prot 100.0 4.6E-55 1E-59 394.8 28.3 229 2-233 105-365 (421)
4 PRK14298 chaperone protein Dna 100.0 2.8E-54 6.2E-59 386.2 30.6 230 2-232 94-349 (377)
5 PRK14288 chaperone protein Dna 100.0 1.9E-54 4.1E-59 386.6 28.5 227 3-232 93-343 (369)
6 PRK14280 chaperone protein Dna 100.0 4.7E-54 1E-58 385.1 30.0 230 2-232 95-351 (376)
7 PRK14278 chaperone protein Dna 100.0 5E-54 1.1E-58 385.0 29.8 231 2-232 90-348 (378)
8 PRK14286 chaperone protein Dna 100.0 6.2E-54 1.3E-58 383.7 29.5 229 2-233 98-356 (372)
9 PRK14287 chaperone protein Dna 100.0 1.5E-53 3.2E-58 381.1 30.1 230 2-232 90-346 (371)
10 PRK14276 chaperone protein Dna 100.0 1.1E-53 2.4E-58 383.2 29.3 230 2-232 98-354 (380)
11 PRK14277 chaperone protein Dna 100.0 1.5E-53 3.3E-58 383.0 29.9 230 2-232 104-363 (386)
12 PRK14285 chaperone protein Dna 100.0 3.5E-53 7.6E-58 377.9 28.8 229 2-233 98-352 (365)
13 PRK14282 chaperone protein Dna 100.0 6.3E-53 1.4E-57 377.1 30.5 232 2-233 103-362 (369)
14 PRK14297 chaperone protein Dna 100.0 7E-53 1.5E-57 378.1 29.7 231 2-233 98-357 (380)
15 PRK14284 chaperone protein Dna 100.0 1.2E-52 2.5E-57 377.8 30.1 228 2-232 106-364 (391)
16 PRK14295 chaperone protein Dna 100.0 3.4E-52 7.5E-57 374.2 30.0 225 3-232 122-370 (389)
17 PRK14281 chaperone protein Dna 100.0 3.1E-52 6.7E-57 375.5 29.6 212 20-232 134-370 (397)
18 PRK10767 chaperone protein Dna 100.0 3.4E-52 7.3E-57 373.0 29.0 228 2-233 95-347 (371)
19 TIGR02349 DnaJ_bact chaperone 100.0 3.7E-52 8E-57 370.8 28.7 231 2-233 93-352 (354)
20 PRK14301 chaperone protein Dna 100.0 3.2E-52 6.9E-57 372.8 27.5 227 2-232 95-348 (373)
21 PRK14279 chaperone protein Dna 100.0 6.3E-52 1.4E-56 372.8 28.6 229 2-233 125-377 (392)
22 PRK14300 chaperone protein Dna 100.0 2.4E-51 5.3E-56 367.1 29.9 211 20-233 116-351 (372)
23 PRK14294 chaperone protein Dna 100.0 2.8E-51 6.1E-56 366.2 28.7 227 2-232 94-348 (366)
24 PRK14290 chaperone protein Dna 100.0 2E-50 4.4E-55 360.5 29.7 229 2-233 94-355 (365)
25 PRK14283 chaperone protein Dna 100.0 7.5E-50 1.6E-54 358.3 29.4 213 19-232 116-354 (378)
26 PRK14292 chaperone protein Dna 100.0 4.2E-50 9.1E-55 359.4 27.6 229 2-232 89-346 (371)
27 PRK14293 chaperone protein Dna 100.0 3E-50 6.6E-55 360.4 26.0 231 2-233 89-353 (374)
28 PRK14291 chaperone protein Dna 100.0 1.3E-49 2.8E-54 357.1 28.9 212 19-233 126-369 (382)
29 PRK14289 chaperone protein Dna 100.0 7.3E-49 1.6E-53 353.0 29.2 214 19-233 124-363 (386)
30 KOG0712 Molecular chaperone (D 100.0 5.4E-46 1.2E-50 321.7 19.1 226 4-232 83-337 (337)
31 PRK14299 chaperone protein Dna 100.0 7.5E-41 1.6E-45 290.6 22.4 177 2-233 100-285 (291)
32 PRK10266 curved DNA-binding pr 100.0 2.7E-40 5.9E-45 289.0 24.8 195 2-233 96-292 (306)
33 TIGR03835 termin_org_DnaJ term 100.0 1.5E-34 3.2E-39 269.1 21.2 161 21-218 655-816 (871)
34 PF01556 CTDII: DnaJ C termina 99.9 1.4E-23 3.1E-28 148.9 8.9 80 148-227 1-81 (81)
35 KOG0713 Molecular chaperone (D 99.8 1.5E-20 3.2E-25 161.9 1.4 221 2-222 101-328 (336)
36 KOG0715 Molecular chaperone (D 99.4 2.2E-13 4.8E-18 118.0 6.7 133 20-159 135-288 (288)
37 PRK14282 chaperone protein Dna 99.2 2E-11 4.4E-16 109.6 6.3 87 19-152 272-359 (369)
38 PF01556 CTDII: DnaJ C termina 99.2 1E-10 2.2E-15 82.8 6.7 72 24-142 1-74 (81)
39 PRK14290 chaperone protein Dna 99.1 8E-11 1.7E-15 105.6 6.5 87 19-153 266-353 (365)
40 PRK14294 chaperone protein Dna 99.1 1.2E-10 2.6E-15 104.6 6.3 87 18-152 259-346 (366)
41 PRK14299 chaperone protein Dna 99.1 3.9E-10 8.5E-15 98.2 9.0 73 142-221 125-197 (291)
42 PRK14285 chaperone protein Dna 99.1 1.9E-10 4E-15 103.2 5.7 85 19-150 262-347 (365)
43 PRK14284 chaperone protein Dna 99.1 3E-10 6.4E-15 102.8 6.9 86 19-150 274-360 (391)
44 PRK14298 chaperone protein Dna 99.0 2.2E-10 4.8E-15 103.2 5.5 87 19-153 261-348 (377)
45 PRK10767 chaperone protein Dna 99.0 3.1E-10 6.7E-15 102.1 5.8 87 19-153 258-345 (371)
46 PRK14287 chaperone protein Dna 99.0 4.3E-10 9.3E-15 101.1 5.5 84 19-150 258-342 (371)
47 PRK14301 chaperone protein Dna 99.0 7.5E-10 1.6E-14 99.6 6.4 84 19-150 260-344 (373)
48 TIGR02349 DnaJ_bact chaperone 99.0 8.3E-10 1.8E-14 98.8 6.2 83 19-149 263-346 (354)
49 PRK14300 chaperone protein Dna 99.0 2E-09 4.4E-14 96.8 8.5 82 19-147 261-343 (372)
50 PRK14279 chaperone protein Dna 99.0 2.8E-09 6.1E-14 96.5 9.0 77 19-143 289-365 (392)
51 PRK14288 chaperone protein Dna 98.9 1.4E-09 2.9E-14 97.8 5.9 84 18-148 253-337 (369)
52 PRK14289 chaperone protein Dna 98.9 3.3E-09 7.2E-14 95.9 7.6 85 145-229 126-282 (386)
53 PRK14291 chaperone protein Dna 98.9 5.2E-09 1.1E-13 94.5 8.9 75 19-140 271-346 (382)
54 PRK10266 curved DNA-binding pr 98.9 7.1E-09 1.5E-13 91.0 9.4 78 144-221 115-205 (306)
55 PRK14295 chaperone protein Dna 98.9 5.3E-09 1.2E-13 94.6 8.5 76 19-141 282-357 (389)
56 PRK14276 chaperone protein Dna 98.9 5.7E-09 1.2E-13 94.2 8.3 77 19-143 266-343 (380)
57 PRK14293 chaperone protein Dna 98.9 1.9E-09 4E-14 97.1 4.8 87 18-152 262-350 (374)
58 PRK14286 chaperone protein Dna 98.9 3.2E-09 6.9E-14 95.5 6.3 84 19-149 266-350 (372)
59 PRK14280 chaperone protein Dna 98.9 9.1E-09 2E-13 92.7 8.6 77 19-143 263-340 (376)
60 PRK14281 chaperone protein Dna 98.8 9.5E-09 2.1E-13 93.2 8.5 77 19-143 282-359 (397)
61 PRK14278 chaperone protein Dna 98.8 1.4E-08 3E-13 91.6 8.6 80 19-145 259-339 (378)
62 PRK14297 chaperone protein Dna 98.8 1.3E-08 2.7E-13 92.0 8.2 77 19-143 268-345 (380)
63 COG0484 DnaJ DnaJ-class molecu 98.8 4.5E-09 9.7E-14 93.2 5.2 83 18-148 259-342 (371)
64 PRK14292 chaperone protein Dna 98.8 4.2E-09 9E-14 94.8 5.0 84 18-149 257-341 (371)
65 PRK14277 chaperone protein Dna 98.7 2.9E-08 6.4E-13 89.7 8.0 75 19-141 275-350 (386)
66 PRK14283 chaperone protein Dna 98.7 3.7E-08 8.1E-13 88.9 8.3 75 19-141 266-341 (378)
67 PRK14296 chaperone protein Dna 98.7 4.6E-08 1E-12 88.0 8.0 74 22-143 273-348 (372)
68 KOG0714 Molecular chaperone (D 98.7 1.4E-07 3.1E-12 81.0 10.1 144 22-199 159-305 (306)
69 PTZ00037 DnaJ_C chaperone prot 98.7 5.3E-08 1.2E-12 88.8 7.6 81 19-146 270-356 (421)
70 TIGR03835 termin_org_DnaJ term 98.6 9.6E-08 2.1E-12 90.9 7.5 73 18-138 741-813 (871)
71 TIGR02642 phage_xxxx uncharact 97.6 8.2E-05 1.8E-09 60.4 4.5 48 58-117 103-150 (186)
72 KOG0712 Molecular chaperone (D 97.4 0.00042 9.1E-09 61.1 6.6 75 19-140 248-324 (337)
73 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.3 0.00031 6.8E-09 47.5 4.1 35 58-94 19-54 (66)
74 PLN03165 chaperone protein dna 96.0 0.017 3.6E-07 43.1 5.2 39 49-91 41-85 (111)
75 COG2214 CbpA DnaJ-class molecu 89.1 1.2 2.5E-05 36.0 6.0 78 24-149 150-227 (237)
76 COG1107 Archaea-specific RecJ- 85.4 0.63 1.4E-05 44.1 2.5 9 58-66 22-30 (715)
77 KOG2813 Predicted molecular ch 73.5 3.4 7.3E-05 36.4 3.0 38 58-101 238-276 (406)
78 PF04246 RseC_MucC: Positive r 72.6 7.4 0.00016 29.7 4.5 59 37-118 4-63 (135)
79 COG1107 Archaea-specific RecJ- 65.1 3.7 7.9E-05 39.1 1.6 45 48-92 52-106 (715)
80 PF12991 DUF3875: Domain of un 53.4 18 0.00039 23.3 2.8 23 205-227 27-51 (54)
81 COG2214 CbpA DnaJ-class molecu 52.1 49 0.0011 26.2 6.1 71 148-220 150-220 (237)
82 TIGR00630 uvra excinuclease AB 49.4 7.7 0.00017 39.4 1.0 40 58-103 740-779 (924)
83 PRK10862 SoxR reducing system 49.4 36 0.00078 26.8 4.6 56 38-116 12-68 (154)
84 KOG0715 Molecular chaperone (D 45.0 25 0.00055 30.6 3.4 53 160-223 222-274 (288)
85 PRK00349 uvrA excinuclease ABC 44.3 18 0.00038 36.9 2.6 39 58-103 742-781 (943)
86 cd02639 R3H_RRM R3H domain of 43.3 33 0.00071 22.6 2.9 21 211-231 17-37 (60)
87 PF12791 RsgI_N: Anti-sigma fa 43.2 70 0.0015 20.2 4.5 35 163-197 5-39 (56)
88 KOG2813 Predicted molecular ch 40.2 10 0.00022 33.6 0.2 32 34-65 169-209 (406)
89 KOG0713 Molecular chaperone (D 38.2 3.1 6.8E-05 36.8 -3.2 82 17-145 245-328 (336)
90 COG0178 UvrA Excinuclease ATPa 38.2 38 0.00082 34.0 3.7 39 58-103 734-773 (935)
91 cd01491 Ube1_repeat1 Ubiquitin 34.7 3.1E+02 0.0067 23.9 9.4 59 103-165 185-254 (286)
92 PRK14051 negative regulator Gr 31.4 1.8E+02 0.0039 21.6 5.4 72 127-199 47-119 (123)
93 PF08774 VRR_NUC: VRR-NUC doma 29.2 70 0.0015 22.7 3.1 25 208-232 62-87 (100)
94 PF07092 DUF1356: Protein of u 28.4 21 0.00045 30.3 0.2 25 81-105 38-64 (238)
95 TIGR03829 YokU_near_AblA uncha 28.2 73 0.0016 22.7 2.9 25 83-107 1-25 (89)
96 PF02736 Myosin_N: Myosin N-te 26.9 1.5E+02 0.0032 17.7 4.9 35 142-179 5-39 (42)
97 PRK00635 excinuclease ABC subu 26.8 23 0.00049 38.7 0.2 39 58-103 1611-1650(1809)
98 PF08792 A2L_zn_ribbon: A2L zi 25.1 61 0.0013 18.5 1.7 13 82-94 4-16 (33)
99 smart00276 GLECT Galectin. Gal 23.8 1.2E+02 0.0026 22.6 3.7 41 178-218 3-49 (128)
100 cd06007 R3H_DEXH_helicase R3H 23.7 91 0.002 20.3 2.6 22 211-232 16-37 (59)
101 TIGR00757 RNaseEG ribonuclease 23.3 58 0.0013 30.0 2.2 16 81-96 390-405 (414)
102 PF09285 Elong-fact-P_C: Elong 22.4 1.7E+02 0.0036 18.9 3.6 28 165-194 21-48 (56)
103 PF00900 Ribosomal_S4e: Riboso 21.3 2.8E+02 0.0061 19.0 6.3 31 161-193 39-70 (77)
104 KOG0315 G-protein beta subunit 20.9 82 0.0018 27.2 2.4 30 151-180 18-48 (311)
105 cd02641 R3H_Smubp-2_like R3H d 20.3 1.1E+02 0.0023 19.9 2.4 20 213-232 19-38 (60)
106 PF03803 Scramblase: Scramblas 20.1 1E+02 0.0022 25.2 2.9 20 211-230 190-209 (221)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-59 Score=410.28 Aligned_cols=231 Identities=28% Similarity=0.490 Sum_probs=211.1
Q ss_pred CcccccccCCCCC--CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEE
Q 026801 1 MLVFDSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEV 66 (233)
Q Consensus 1 ~d~F~~~Fgg~~~--~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~ 66 (233)
+|||++|||||++ ++..++++|.|+.+.++|||+||+.|++++|.+++...|+ |+|+ ++|+|+|.+
T Consensus 92 ~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v 171 (371)
T COG0484 92 GDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQV 171 (371)
T ss_pred HHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeE
Confidence 3899999986543 2344578999999999999999999999999999999999 9886 789999997
Q ss_pred EEEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEE
Q 026801 67 YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFR 133 (233)
Q Consensus 67 ~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~ 133 (233)
.+.+.. |++++.+ +++|++|+|.+++++.++++|+||+|+.+|++|+++|+|++. .++++|||||.
T Consensus 172 ~~~~~~-g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~ 250 (371)
T COG0484 172 RTVQRT-GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVF 250 (371)
T ss_pred EEEEee-eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEE
Confidence 665533 5555444 899999999999999999999999999999999999999994 57788999999
Q ss_pred EEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEE
Q 026801 134 IRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFE 213 (233)
Q Consensus 134 i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~ 213 (233)
|.+++|+.|.|+|+||+++++|++.+|++|++++|+|+||+ ++|+||+++++|+++||+|+|||...+..+|||||+++
T Consensus 251 i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~ 329 (371)
T COG0484 251 VHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVK 329 (371)
T ss_pred EEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999998 99999999999999999999999988777899999999
Q ss_pred EECCCCCCHHHHHHHHHhhC
Q 026801 214 VLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 214 v~~P~~l~~~~~~~l~~~~~ 233 (233)
|.+|++|+.+|+++|++|.+
T Consensus 330 v~~P~~ls~~q~~lL~~~~~ 349 (371)
T COG0484 330 VETPKNLSDEQKELLEEFAK 349 (371)
T ss_pred EEcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999863
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5e-55 Score=390.50 Aligned_cols=230 Identities=23% Similarity=0.393 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-E
Q 026801 2 LVFDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY-H 68 (233)
Q Consensus 2 d~F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~-~ 68 (233)
|+|++|||+++ +...++++++|+.+.+.|||+|||+|++++|.+.+.+.|+ |.|+ +.|+|+|.+. .
T Consensus 103 d~f~~~fggg~-~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 181 (372)
T PRK14296 103 NIFSDFFGSNK-SDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQ 181 (372)
T ss_pred hhhhhhcCCCc-cCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEE
Confidence 56788887542 1223456799999999999999999999999999999999 9885 6899999954 4
Q ss_pred EEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEE
Q 026801 69 KQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIR 135 (233)
Q Consensus 69 ~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~ 135 (233)
++.||.++|+.+ .+.|+.|+|++++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|+
T Consensus 182 ~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~ 261 (372)
T PRK14296 182 KNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIY 261 (372)
T ss_pred EeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEE
Confidence 467775554322 788999999999999999999999999999999999999984 6778999999999
Q ss_pred ecCCCceeee-CCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCC-CCCccEEEEEE
Q 026801 136 TAPHDRFRRE-GNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFE 213 (233)
Q Consensus 136 v~~~~~f~r~-g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~-~~~GdL~v~~~ 213 (233)
++||+.|+|+ |+||+++++|+|++||+|+++.|+||||+ ++|+||+++++|++++|+|+|||.... ..+|||||+|+
T Consensus 262 v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~ 340 (372)
T PRK14296 262 LKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVN 340 (372)
T ss_pred EeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEE
Confidence 9999999995 89999999999999999999999999997 899999999999999999999995533 34699999999
Q ss_pred EECCCCCCHHHHHHHHHhhC
Q 026801 214 VLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 214 v~~P~~l~~~~~~~l~~~~~ 233 (233)
|.||+.|+++|+++|+++++
T Consensus 341 V~~P~~Ls~~q~~~l~~l~~ 360 (372)
T PRK14296 341 IVVPKNLSKKEKELIEQIYE 360 (372)
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 99999999999999999873
No 3
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=4.6e-55 Score=394.75 Aligned_cols=229 Identities=34% Similarity=0.615 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC----------CCCCcccE-EEEE
Q 026801 2 LVFDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNE-VYHK 69 (233)
Q Consensus 2 d~F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~----------~~C~G~G~-~~~~ 69 (233)
|+|+.|||+++ ...++++|+|+.+.|.|||+|+|+|+++++.+.+.+.|+ |+|+ +.|+|+|. +...
T Consensus 105 d~f~~~Fggg~--~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~ 182 (421)
T PTZ00037 105 DLFDLIFGGGR--KPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIR 182 (421)
T ss_pred hhHHHhhcccc--ccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEE
Confidence 68999998642 123356799999999999999999999999999999999 9875 68999998 4455
Q ss_pred EeCCceEEEee---------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEE
Q 026801 70 QIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRI 134 (233)
Q Consensus 70 ~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i 134 (233)
+.++ ++++.+ .++|+.|+|.+++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||+|+|
T Consensus 183 ~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I 261 (421)
T PTZ00037 183 QMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFIL 261 (421)
T ss_pred eecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEE
Confidence 6676 444333 378999999999999999999999999999999999999997788999999999
Q ss_pred EecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCC--CCCCcEEEECCCCcCCCCCC-CCccEEEE
Q 026801 135 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSN-KKGDLYIT 211 (233)
Q Consensus 135 ~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~--~~~g~~~~i~g~G~p~~~~~-~~GdL~v~ 211 (233)
.++||+.|+|+|+||+++++|+|++||+|+++.|+||||+.++|++|++ ++||++++|+|+|||..+++ .+|||||+
T Consensus 262 ~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~ 341 (421)
T PTZ00037 262 NEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVT 341 (421)
T ss_pred EecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEE
Confidence 9999999999999999999999999999999999999998899999976 99999999999999976653 56999999
Q ss_pred EEEECC--CCCCHHHHHHHHHhhC
Q 026801 212 FEVLFP--TTLTEDQKTRIKEVLG 233 (233)
Q Consensus 212 ~~v~~P--~~l~~~~~~~l~~~~~ 233 (233)
|+|.|| +.|+++|+++|++++.
T Consensus 342 ~~V~~P~~~~Ls~~qk~ll~~l~~ 365 (421)
T PTZ00037 342 FEVIFPVDRKFTNEEKEILKSLFP 365 (421)
T ss_pred EEEEcCCCCCCCHHHHHHHHHhcc
Confidence 999999 9999999999999873
No 4
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-54 Score=386.24 Aligned_cols=230 Identities=25% Similarity=0.391 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEE
Q 026801 2 LVFDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHK 69 (233)
Q Consensus 2 d~F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~ 69 (233)
|+|++|||++++....+++++.|+.+.++|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+...
T Consensus 94 d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 173 (377)
T PRK14298 94 DIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTT 173 (377)
T ss_pred hhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEE
Confidence 6899999864321123456899999999999999999999999999999999 9875 689999996554
Q ss_pred -EeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEE
Q 026801 70 -QIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIR 135 (233)
Q Consensus 70 -~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~ 135 (233)
+..+|+++..+ .++|+.|+|++++.+.++++|.||||+++|++|+|+|+|++ .+++.+|||+|+|.
T Consensus 174 ~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~ 253 (377)
T PRK14298 174 RSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLH 253 (377)
T ss_pred EecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEE
Confidence 44445554332 78999999999999999999999999999999999999998 56788999999999
Q ss_pred ecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEE
Q 026801 136 TAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL 215 (233)
Q Consensus 136 v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~ 215 (233)
++||+.|+|+|+||+++++|+|++|++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+++.+|||||+|+|.
T Consensus 254 v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~ 332 (377)
T PRK14298 254 VKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVK 332 (377)
T ss_pred EecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEE
Confidence 999999999999999999999999999999999999997 8999999999999999999999977655579999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 026801 216 FPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 216 ~P~~l~~~~~~~l~~~~ 232 (233)
+|+.|+++++++|++++
T Consensus 333 ~P~~ls~~~~~ll~~l~ 349 (377)
T PRK14298 333 TPTKLTQEQKELLREFD 349 (377)
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 99999999999999987
No 5
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-54 Score=386.60 Aligned_cols=227 Identities=19% Similarity=0.404 Sum_probs=201.2
Q ss_pred ccccccCCCCCC-CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC----------CCCCcccEEEEEE
Q 026801 3 VFDSFFGGGPME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNEVYHKQ 70 (233)
Q Consensus 3 ~F~~~Fgg~~~~-~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~----------~~C~G~G~~~~~~ 70 (233)
+|++|||+|+.+ ...++++++|+.+.+.|||+|||+|++++|.+.+.+.|+ |.|+ +.|+|+|.+...+
T Consensus 93 ~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~ 172 (369)
T PRK14288 93 FFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQ 172 (369)
T ss_pred HHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEe
Confidence 455666643211 123346799999999999999999999999999999999 9885 6899999865544
Q ss_pred eCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecC
Q 026801 71 IGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAP 138 (233)
Q Consensus 71 ~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~ 138 (233)
|++++.+ .+.|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++.+++.+|||+|+|.+++
T Consensus 173 ---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~ 249 (369)
T PRK14288 173 ---GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKE 249 (369)
T ss_pred ---ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEE
Confidence 3333222 7889999999999999999999999999999999999999977788999999999999
Q ss_pred CCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCC
Q 026801 139 HDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT 218 (233)
Q Consensus 139 ~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~ 218 (233)
|+.|+|+|+||+++++|+|+|||+|++++|+||||+.++|++|+++++|++++|+|+|||..+...+|||||+|+|.+|+
T Consensus 250 h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~ 329 (369)
T PRK14288 250 DEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPK 329 (369)
T ss_pred CCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 99999999999999999999999999999999999889999999999999999999999977644569999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 026801 219 TLTEDQKTRIKEVL 232 (233)
Q Consensus 219 ~l~~~~~~~l~~~~ 232 (233)
+|+++|+++|++++
T Consensus 330 ~ls~~q~~~l~~~~ 343 (369)
T PRK14288 330 SLNKEQQELLEKLH 343 (369)
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999999987
No 6
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.7e-54 Score=385.07 Aligned_cols=230 Identities=26% Similarity=0.439 Sum_probs=206.4
Q ss_pred cccccccCCCCCC-CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-
Q 026801 2 LVFDSFFGGGPME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY- 67 (233)
Q Consensus 2 d~F~~~Fgg~~~~-~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~- 67 (233)
|+|++|||+++.+ ...++++++|+.+.++|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+.
T Consensus 95 d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~ 174 (376)
T PRK14280 95 DIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSV 174 (376)
T ss_pred hhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEE
Confidence 6789999764321 123346899999999999999999999999999999999 9875 6799999965
Q ss_pred EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEE
Q 026801 68 HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRI 134 (233)
Q Consensus 68 ~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i 134 (233)
.+++++|++++.+ .++|+.|+|++++.+.++++|.||+|+++|++|+|+|+|++ ..+..+|||+|+|
T Consensus 175 ~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i 254 (376)
T PRK14280 175 EQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVF 254 (376)
T ss_pred EeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEE
Confidence 4457788876543 78899999999999999999999999999999999999998 4556789999999
Q ss_pred EecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEE
Q 026801 135 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 214 (233)
Q Consensus 135 ~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v 214 (233)
.++||+.|+|+|+||+++++|+|++|++|++++|+|+||+ +.|+||+++++|++++|+|+|||...+..+|||||+|+|
T Consensus 255 ~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v 333 (376)
T PRK14280 255 RVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRV 333 (376)
T ss_pred EEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999996 899999999999999999999998765557999999999
Q ss_pred ECCCCCCHHHHHHHHHhh
Q 026801 215 LFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 215 ~~P~~l~~~~~~~l~~~~ 232 (233)
.+|++|+++|+++|++++
T Consensus 334 ~~P~~Ls~~q~~~l~~l~ 351 (376)
T PRK14280 334 VTPTKLTDRQKELLREFA 351 (376)
T ss_pred ECCCCCCHHHHHHHHHHH
Confidence 999999999999999986
No 7
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5e-54 Score=385.00 Aligned_cols=231 Identities=30% Similarity=0.484 Sum_probs=206.5
Q ss_pred cccccccCCCCCCC--CCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE
Q 026801 2 LVFDSFFGGGPMEE--DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY 67 (233)
Q Consensus 2 d~F~~~Fgg~~~~~--~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~ 67 (233)
|+|++|||+++.+. ..+++++.|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+.
T Consensus 90 d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~ 169 (378)
T PRK14278 90 DVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQ 169 (378)
T ss_pred HHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEE
Confidence 68999998643111 12356799999999999999999999999999999999 9875 6799999965
Q ss_pred E-EEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEE
Q 026801 68 H-KQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFR 133 (233)
Q Consensus 68 ~-~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~ 133 (233)
. ++.++|++++.+ .++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+
T Consensus 170 ~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~ 249 (378)
T PRK14278 170 TVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVE 249 (378)
T ss_pred EEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEE
Confidence 4 456677776444 7889999999999999999999999999999999999999855 4667999999
Q ss_pred EEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEE
Q 026801 134 IRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFE 213 (233)
Q Consensus 134 i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~ 213 (233)
|+++||+.|+|+|+||+++++|+|++|++|+++.|+|+|+..+.|+||+++++|++++|+|+|||..+...+|||||+|+
T Consensus 250 i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~ 329 (378)
T PRK14278 250 VHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVE 329 (378)
T ss_pred EEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999776799999999999999999999999766555799999999
Q ss_pred EECCCCCCHHHHHHHHHhh
Q 026801 214 VLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 214 v~~P~~l~~~~~~~l~~~~ 232 (233)
|.||++|+++|+++|++++
T Consensus 330 V~~P~~Ls~~qk~~l~~~~ 348 (378)
T PRK14278 330 VVVPTRLDHEDIELLRELK 348 (378)
T ss_pred EEcCCCCCHHHHHHHHHHH
Confidence 9999999999999999987
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.2e-54 Score=383.66 Aligned_cols=229 Identities=25% Similarity=0.421 Sum_probs=203.4
Q ss_pred cccccccCCCCCC-----CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCccc
Q 026801 2 LVFDSFFGGGPME-----EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRN 64 (233)
Q Consensus 2 d~F~~~Fgg~~~~-----~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G 64 (233)
|+|++|||+++.+ ...++++++|+.+.++|||+|||+|+++++.+.+.+.|+ |.|+ +.|+|+|
T Consensus 98 d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G 177 (372)
T PRK14286 98 DIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSG 177 (372)
T ss_pred hHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeE
Confidence 6789999864211 122346799999999999999999999999999999999 9885 6799999
Q ss_pred EEEEEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCC-CCCCccEE
Q 026801 65 EVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLK 131 (233)
Q Consensus 65 ~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~ 131 (233)
.+...+ |++++.+ .++|+.|+|++++.+.++++|+||||+++|++|+|+|+|++.+ +..+||||
T Consensus 178 ~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~ 254 (372)
T PRK14286 178 QIRRTQ---GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLY 254 (372)
T ss_pred EEEEEe---ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEE
Confidence 865543 3443222 7889999999999999999999999999999999999999854 45679999
Q ss_pred EEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEE
Q 026801 132 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYIT 211 (233)
Q Consensus 132 v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~ 211 (233)
|+|+++||+.|+|+|+||++++.|+|++|++|+++.|+|+||+.+.|+||+++++|++++|+|+|||..+.+.+|||||+
T Consensus 255 i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~ 334 (372)
T PRK14286 255 VVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVI 334 (372)
T ss_pred EEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEE
Confidence 99999999999999999999999999999999999999999988999999999999999999999998765567999999
Q ss_pred EEEECCCCCCHHHHHHHHHhhC
Q 026801 212 FEVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 212 ~~v~~P~~l~~~~~~~l~~~~~ 233 (233)
|+|.||+.|+++|+++|+++++
T Consensus 335 ~~V~~P~~Ls~~qk~~l~~l~~ 356 (372)
T PRK14286 335 VKIEIPKKITRRQRELIEEFAR 356 (372)
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999873
No 9
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-53 Score=381.07 Aligned_cols=230 Identities=23% Similarity=0.399 Sum_probs=207.0
Q ss_pred cccccccCCCCC-CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-
Q 026801 2 LVFDSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY- 67 (233)
Q Consensus 2 d~F~~~Fgg~~~-~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~- 67 (233)
|+|++|||+++. +...++++++|+.+.++|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+.
T Consensus 90 d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~ 169 (371)
T PRK14287 90 DIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNV 169 (371)
T ss_pred HHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEE
Confidence 789999986431 1112346799999999999999999999999999999999 9875 6899999955
Q ss_pred EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEE
Q 026801 68 HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRI 134 (233)
Q Consensus 68 ~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i 134 (233)
.++.++|++++.+ .+.|+.|.|.+++.+.++++|.||||+++|++|+|+|+|++. .++.+|||+|+|
T Consensus 170 ~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i 249 (371)
T PRK14287 170 EQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVF 249 (371)
T ss_pred EEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEE
Confidence 4567888887544 778999999999999999999999999999999999999984 556789999999
Q ss_pred EecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEE
Q 026801 135 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 214 (233)
Q Consensus 135 ~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v 214 (233)
+++||+.|+|+|+||++++.|+|++|++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+++.+|||||+|+|
T Consensus 250 ~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v 328 (371)
T PRK14287 250 NVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRV 328 (371)
T ss_pred EEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999997 899999999999999999999997765557999999999
Q ss_pred ECCCCCCHHHHHHHHHhh
Q 026801 215 LFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 215 ~~P~~l~~~~~~~l~~~~ 232 (233)
.+|+.|+++|+++|++++
T Consensus 329 ~~P~~l~~~q~~ll~~l~ 346 (371)
T PRK14287 329 VTPKNLTEKEKELMREFA 346 (371)
T ss_pred EcCCCCCHHHHHHHHHHH
Confidence 999999999999999987
No 10
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-53 Score=383.15 Aligned_cols=230 Identities=25% Similarity=0.449 Sum_probs=207.2
Q ss_pred cccccccCCCCC-CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-
Q 026801 2 LVFDSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY- 67 (233)
Q Consensus 2 d~F~~~Fgg~~~-~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~- 67 (233)
|+|++|||+++. +...+++++.|+.+.+.|||+|+|+|+++++.+.+.+.|+ |+|+ +.|+|+|.+.
T Consensus 98 d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~ 177 (380)
T PRK14276 98 DIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITV 177 (380)
T ss_pred hHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEE
Confidence 678999986431 1123356899999999999999999999999999999999 9875 6799999965
Q ss_pred EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEE
Q 026801 68 HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRI 134 (233)
Q Consensus 68 ~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i 134 (233)
.+++++|++++.+ +++|+.|+|++++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|
T Consensus 178 ~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i 257 (380)
T PRK14276 178 DTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVF 257 (380)
T ss_pred EEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEE
Confidence 4567888887644 788999999999999999999999999999999999999984 456789999999
Q ss_pred EecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEE
Q 026801 135 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 214 (233)
Q Consensus 135 ~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v 214 (233)
+++||+.|+|+|+||+++++|+|++|++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+.+.+|||||+|+|
T Consensus 258 ~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v 336 (380)
T PRK14276 258 RVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNI 336 (380)
T ss_pred EEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999997 899999999999999999999998765557999999999
Q ss_pred ECCCCCCHHHHHHHHHhh
Q 026801 215 LFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 215 ~~P~~l~~~~~~~l~~~~ 232 (233)
.+|+.|+++|+++|++++
T Consensus 337 ~~P~~l~~~q~~~l~~~~ 354 (380)
T PRK14276 337 VTPTKLNDAQKEALKAFA 354 (380)
T ss_pred ECCCCCCHHHHHHHHHHH
Confidence 999999999999999987
No 11
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-53 Score=382.97 Aligned_cols=230 Identities=26% Similarity=0.410 Sum_probs=205.6
Q ss_pred cccccccCCC--CCC--CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccE
Q 026801 2 LVFDSFFGGG--PME--EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNE 65 (233)
Q Consensus 2 d~F~~~Fgg~--~~~--~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~ 65 (233)
|+|++||++. +.+ ...++++++|+.+.|+|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|+
T Consensus 104 d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~ 183 (386)
T PRK14277 104 DIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQ 183 (386)
T ss_pred HHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEE
Confidence 4577777642 111 112346799999999999999999999999999999999 8874 67999999
Q ss_pred EE-EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEE
Q 026801 66 VY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLK 131 (233)
Q Consensus 66 ~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~ 131 (233)
+. .+++++|++++.+ .++|+.|+|++++.+.++++|.||||+++|++|+|+|+|++ ..+..+|||+
T Consensus 184 ~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~ 263 (386)
T PRK14277 184 VRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLY 263 (386)
T ss_pred EEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEE
Confidence 54 5567889887655 78899999999999999999999999999999999999998 4566789999
Q ss_pred EEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEE
Q 026801 132 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYIT 211 (233)
Q Consensus 132 v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~ 211 (233)
|+|+++||+.|+|+|+||+++++|+|++|++|+++.|+||||+ +.|.||+++++|++++|+|+|||..+++.+|||||+
T Consensus 264 v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 342 (386)
T PRK14277 264 IVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK 342 (386)
T ss_pred EEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 9999999999999999999999999999999999999999997 899999999999999999999998765567999999
Q ss_pred EEEECCCCCCHHHHHHHHHhh
Q 026801 212 FEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 212 ~~v~~P~~l~~~~~~~l~~~~ 232 (233)
|+|.||+.|+++|+++|++++
T Consensus 343 ~~V~~P~~Ls~~qk~~l~~l~ 363 (386)
T PRK14277 343 VYIEVPKKLTEKQKELLREFE 363 (386)
T ss_pred EEEEeCCCCCHHHHHHHHHHH
Confidence 999999999999999999987
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.5e-53 Score=377.94 Aligned_cols=229 Identities=26% Similarity=0.465 Sum_probs=203.8
Q ss_pred cccccccCCCCCC-CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEE
Q 026801 2 LVFDSFFGGGPME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYH 68 (233)
Q Consensus 2 d~F~~~Fgg~~~~-~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~ 68 (233)
|+|++|||+++++ +..+++++.|+.+.++|||+|+|+|+++++.+.+.+.|+ |+|+ +.|+|+|++..
T Consensus 98 d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~ 177 (365)
T PRK14285 98 DIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQ 177 (365)
T ss_pred HHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEe
Confidence 5788899863211 122356899999999999999999999999999999999 9875 67999998653
Q ss_pred EEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEE
Q 026801 69 KQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIR 135 (233)
Q Consensus 69 ~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~ 135 (233)
++|++++.+ .++|+.|+|++++.+.++++|+||||+++|++|+|+|+|++.+ +..+|||+|+|+
T Consensus 178 ---~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~ 254 (365)
T PRK14285 178 ---GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKIL 254 (365)
T ss_pred ---cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEE
Confidence 345554322 7899999999999999999999999999999999999999854 466899999999
Q ss_pred ecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEE
Q 026801 136 TAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL 215 (233)
Q Consensus 136 v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~ 215 (233)
+++|+.|+|+|+||+++++|+|.+|++|++++|+|+||+.++|+||+++++|++++|+|+|||..+...+|||||+|+|.
T Consensus 255 v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~ 334 (365)
T PRK14285 255 IKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIK 334 (365)
T ss_pred EecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999999889999999999999999999999977655569999999999
Q ss_pred CCCCCCHHHHHHHHHhhC
Q 026801 216 FPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 216 ~P~~l~~~~~~~l~~~~~ 233 (233)
+|+.|+++|+++|+++++
T Consensus 335 ~P~~l~~~q~~~l~~l~~ 352 (365)
T PRK14285 335 TPKNLNSNAIKLLENLSK 352 (365)
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 999999999999999873
No 13
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.3e-53 Score=377.13 Aligned_cols=232 Identities=26% Similarity=0.450 Sum_probs=208.1
Q ss_pred cccccccCCCCC--CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE
Q 026801 2 LVFDSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY 67 (233)
Q Consensus 2 d~F~~~Fgg~~~--~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~ 67 (233)
|+|++|||+++. +...++++++|+.+.++|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+.
T Consensus 103 d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~ 182 (369)
T PRK14282 103 DIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIR 182 (369)
T ss_pred hhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEE
Confidence 678888875321 1123356799999999999999999999999999999999 9875 6799999954
Q ss_pred -EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEE
Q 026801 68 -HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFR 133 (233)
Q Consensus 68 -~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~ 133 (233)
.++++||++++.+ .+.|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++ ..++.+|||+|+
T Consensus 183 ~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~ 262 (369)
T PRK14282 183 EERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVI 262 (369)
T ss_pred EEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEE
Confidence 5568888887655 77899999999999999999999999999999999999998 556788999999
Q ss_pred EEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEE
Q 026801 134 IRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFE 213 (233)
Q Consensus 134 i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~ 213 (233)
|.++||+.|+|+|+||+++++|+|.+|++|++++|+|+||+.++|+||+++++|++++|+|+|||..+...+|||||+|+
T Consensus 263 i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~ 342 (369)
T PRK14282 263 VRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVH 342 (369)
T ss_pred EEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999998899999999999999999999999765445799999999
Q ss_pred EECCCCCCHHHHHHHHHhhC
Q 026801 214 VLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 214 v~~P~~l~~~~~~~l~~~~~ 233 (233)
|.+|+.|+++++++|+++++
T Consensus 343 v~~P~~l~~~~~~ll~~l~~ 362 (369)
T PRK14282 343 VEIPKRLSREERKLLKELAK 362 (369)
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 99999999999999999873
No 14
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7e-53 Score=378.14 Aligned_cols=231 Identities=26% Similarity=0.468 Sum_probs=205.9
Q ss_pred cccccccCCCC--CC-CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEE
Q 026801 2 LVFDSFFGGGP--ME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEV 66 (233)
Q Consensus 2 d~F~~~Fgg~~--~~-~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~ 66 (233)
|+|++|||+++ .+ ...++++++|+.+.|+|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+
T Consensus 98 d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 177 (380)
T PRK14297 98 DIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQI 177 (380)
T ss_pred HHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEE
Confidence 67999998631 11 123346799999999999999999999999999999999 9874 679999995
Q ss_pred E-EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEE
Q 026801 67 Y-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKF 132 (233)
Q Consensus 67 ~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v 132 (233)
. .++.++|++++.+ .++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++ ..+..+|||+|
T Consensus 178 ~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v 257 (380)
T PRK14297 178 RVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYI 257 (380)
T ss_pred EEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEE
Confidence 4 4567788776443 78899999999999999999999999999999999999998 45567899999
Q ss_pred EEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEE
Q 026801 133 RIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITF 212 (233)
Q Consensus 133 ~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~ 212 (233)
+|.+++|+.|+|+|+||+++++|+|++|++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+...+|||||+|
T Consensus 258 ~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~ 336 (380)
T PRK14297 258 NIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTV 336 (380)
T ss_pred EEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEE
Confidence 999999999999999999999999999999999999999996 8999999999999999999999976655579999999
Q ss_pred EEECCCCCCHHHHHHHHHhhC
Q 026801 213 EVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 213 ~v~~P~~l~~~~~~~l~~~~~ 233 (233)
+|.||+.|+++|+++|+++++
T Consensus 337 ~v~~P~~ls~~q~~~l~~~~~ 357 (380)
T PRK14297 337 IVDIPKKLNSKQKEALTMFME 357 (380)
T ss_pred EEEcCCCCCHHHHHHHHHHHH
Confidence 999999999999999999873
No 15
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-52 Score=377.80 Aligned_cols=228 Identities=23% Similarity=0.385 Sum_probs=201.3
Q ss_pred cccccccCCCC--CC---CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCccc
Q 026801 2 LVFDSFFGGGP--ME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRN 64 (233)
Q Consensus 2 d~F~~~Fgg~~--~~---~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G 64 (233)
|+|++|||+++ ++ ...+++++.|+.+.|.|||+|+|+|+++++.+.+.+.|+ |+|+ +.|+|+|
T Consensus 106 d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G 185 (391)
T PRK14284 106 SFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSG 185 (391)
T ss_pred cchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCee
Confidence 56778887521 11 112346799999999999999999999999999999999 9775 6799999
Q ss_pred EEEEEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEE
Q 026801 65 EVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLK 131 (233)
Q Consensus 65 ~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~ 131 (233)
.+...+ |++++.+ .++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++. .++.+|||+
T Consensus 186 ~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~ 262 (391)
T PRK14284 186 QVVQSR---GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLY 262 (391)
T ss_pred EEEEEe---ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEE
Confidence 866544 3333222 788999999999999999999999999999999999999985 467889999
Q ss_pred EEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCC-CcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEE
Q 026801 132 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD-EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYI 210 (233)
Q Consensus 132 v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tld-G~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v 210 (233)
|+|+++||+.|+|+|+||+++++|+|++|++|++++|+|+| |+.++|+||+++++|++++|+|+|||..+++.+|||||
T Consensus 263 v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 342 (391)
T PRK14284 263 VFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLV 342 (391)
T ss_pred EEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEE
Confidence 99999999999999999999999999999999999999999 56799999999999999999999999876555799999
Q ss_pred EEEEECCCCCCHHHHHHHHHhh
Q 026801 211 TFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 211 ~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
+|+|.+|+.|+++|+++|++++
T Consensus 343 ~~~v~~P~~l~~~q~~ll~~l~ 364 (391)
T PRK14284 343 RISVETPQNLSEEQKELLRQFA 364 (391)
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999999999986
No 16
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-52 Score=374.17 Aligned_cols=225 Identities=25% Similarity=0.421 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEEE
Q 026801 3 VFDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQ 70 (233)
Q Consensus 3 ~F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~~ 70 (233)
+|++|||+++ ...++++++|+.+.|+|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+...+
T Consensus 122 ~f~~~fg~~~--~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~ 199 (389)
T PRK14295 122 VFGGLFNRGG--RRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS 199 (389)
T ss_pred hhcccccCCC--CCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe
Confidence 4555555421 123356799999999999999999999999999999999 9875 6799999866554
Q ss_pred eCCceE-EEee----------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEecC
Q 026801 71 IGPGMF-QQMT----------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAP 138 (233)
Q Consensus 71 ~~~g~~-~~~~----------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v~~ 138 (233)
+ ++. ++.+ .++|+.|.|++++.+.++++|.||+|+++|++|+|+|+|++ ..+..+|||+|+|.++|
T Consensus 200 -g-~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~ 277 (389)
T PRK14295 200 -G-GFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDP 277 (389)
T ss_pred -c-ceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEec
Confidence 2 221 1111 78899999999999999999999999999999999999998 45677899999999999
Q ss_pred CCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCC
Q 026801 139 HDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT 218 (233)
Q Consensus 139 ~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~ 218 (233)
|+.|+|+|+||+++++|+|++|++|++++|+|+||+.+.|+||+++++|++++|+|+|||... +.+|||||+|+|.||+
T Consensus 278 h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~~-~~~GDL~i~~~v~~P~ 356 (389)
T PRK14295 278 HPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKD-GTRGDLLVTVEVAVPK 356 (389)
T ss_pred CCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCCC-CCCCCEEEEEEEECCC
Confidence 999999999999999999999999999999999998899999999999999999999999743 3479999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 026801 219 TLTEDQKTRIKEVL 232 (233)
Q Consensus 219 ~l~~~~~~~l~~~~ 232 (233)
+|+++|+++|++++
T Consensus 357 ~Ls~~qk~~l~~l~ 370 (389)
T PRK14295 357 DLSGKAREALEAFR 370 (389)
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999999986
No 17
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.1e-52 Score=375.54 Aligned_cols=212 Identities=25% Similarity=0.438 Sum_probs=195.9
Q ss_pred CCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC----------CCCCcccEEE-EEEeCCceEEEee-------
Q 026801 20 VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNEVY-HKQIGPGMFQQMT------- 80 (233)
Q Consensus 20 ~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~----------~~C~G~G~~~-~~~~~~g~~~~~~------- 80 (233)
+++.|+.+.++|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+. ..+.++|++++.+
T Consensus 134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 213 (397)
T PRK14281 134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGG 213 (397)
T ss_pred CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcc
Confidence 4689999999999999999999999999999999 9874 6899999964 4456778876543
Q ss_pred -----eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCceEEEEE
Q 026801 81 -----EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVT 154 (233)
Q Consensus 81 -----~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~ 154 (233)
.++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++
T Consensus 214 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~ 293 (397)
T PRK14281 214 EGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLA 293 (397)
T ss_pred eeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEE
Confidence 7889999999999999999999999999999999999999854 5689999999999999999999999999999
Q ss_pred ECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhh
Q 026801 155 VTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 155 i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
|+|.+|++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+++.+|||||+|+|.||++|+++|+++|++++
T Consensus 294 Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~ 370 (397)
T PRK14281 294 VSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKELK 370 (397)
T ss_pred ecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 99999999999999999996 899999999999999999999997665557999999999999999999999999986
No 18
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-52 Score=372.96 Aligned_cols=228 Identities=26% Similarity=0.423 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEE
Q 026801 2 LVFDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHK 69 (233)
Q Consensus 2 d~F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~ 69 (233)
|+|++|||+++++...++++++|+.+.|+|||+|+|+|++++|.+.+.+.|+ |.|+ +.|+|+|.+...
T Consensus 95 ~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 174 (371)
T PRK10767 95 DIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQ 174 (371)
T ss_pred hhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEe
Confidence 4667777653211223456899999999999999999999999999999999 9875 679999986655
Q ss_pred EeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEe
Q 026801 70 QIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRT 136 (233)
Q Consensus 70 ~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v 136 (233)
+ |++++.+ .+.|+.|+|++++.+.++++|.||||+++|++|+|+|+|++ .+++.+|||+|+|++
T Consensus 175 ~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v 251 (371)
T PRK10767 175 Q---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHV 251 (371)
T ss_pred e---ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEE
Confidence 4 3333222 78899999999999999999999999999999999999998 566789999999999
Q ss_pred cCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEEC
Q 026801 137 APHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLF 216 (233)
Q Consensus 137 ~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~ 216 (233)
+||+.|+|+|+||++++.|+|++|++|++++|+|+|| .+.|.||+++++|++++|+|+|||..+++.+|||||+|+|.+
T Consensus 252 ~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~ 330 (371)
T PRK10767 252 KEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVET 330 (371)
T ss_pred eeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEEC
Confidence 9999999999999999999999999999999999999 589999999999999999999999766555799999999999
Q ss_pred CCCCCHHHHHHHHHhhC
Q 026801 217 PTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 217 P~~l~~~~~~~l~~~~~ 233 (233)
|+.|+++|+++|+++++
T Consensus 331 P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 331 PVNLTKRQKELLEEFEE 347 (371)
T ss_pred CCCCCHHHHHHHHHHHh
Confidence 99999999999999873
No 19
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=3.7e-52 Score=370.81 Aligned_cols=231 Identities=29% Similarity=0.465 Sum_probs=208.1
Q ss_pred cccccccCCCCC-C--CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEE
Q 026801 2 LVFDSFFGGGPM-E--EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEV 66 (233)
Q Consensus 2 d~F~~~Fgg~~~-~--~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~ 66 (233)
|+|++|||++++ + ...++++++|+.+.++|||+|+|+|+++++.+++.+.|+ |.|+ +.|+|+|.+
T Consensus 93 ~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 172 (354)
T TIGR02349 93 DIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQV 172 (354)
T ss_pred hhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEE
Confidence 678899986321 1 123456899999999999999999999999999999999 8875 689999995
Q ss_pred E-EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEE
Q 026801 67 Y-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKF 132 (233)
Q Consensus 67 ~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v 132 (233)
. ..+++||++++.+ .+.|+.|+|++++.+.++++|+||||+++|++|+|+|+|++ ..+..+|||+|
T Consensus 173 ~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v 252 (354)
T TIGR02349 173 RRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYV 252 (354)
T ss_pred EEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEE
Confidence 5 4568899987644 67899999999999999999999999999999999999998 45677899999
Q ss_pred EEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEE
Q 026801 133 RIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITF 212 (233)
Q Consensus 133 ~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~ 212 (233)
+|++++|+.|+|+|+||++++.|+|++|++|+++.|+|+|| .++|.+|+++++|++++|+|+|||..+++.+|||||+|
T Consensus 253 ~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~ 331 (354)
T TIGR02349 253 VIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTV 331 (354)
T ss_pred EEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999977655679999999
Q ss_pred EEECCCCCCHHHHHHHHHhhC
Q 026801 213 EVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 213 ~v~~P~~l~~~~~~~l~~~~~ 233 (233)
+|.+|+.|+++|+++|+++|+
T Consensus 332 ~v~~P~~l~~~~~~~l~~~~~ 352 (354)
T TIGR02349 332 KVETPKNLSKEQKELLEELAE 352 (354)
T ss_pred EEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999999974
No 20
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-52 Score=372.76 Aligned_cols=227 Identities=28% Similarity=0.449 Sum_probs=200.8
Q ss_pred cccccccCCCCC--CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE
Q 026801 2 LVFDSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY 67 (233)
Q Consensus 2 d~F~~~Fgg~~~--~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~ 67 (233)
|+|++|||+++. .+..++++++|+.+.|.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+.
T Consensus 95 d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~ 174 (373)
T PRK14301 95 DIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVR 174 (373)
T ss_pred HHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEE
Confidence 567777763221 1123456899999999999999999999999999999999 9875 6899999865
Q ss_pred EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEE
Q 026801 68 HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRI 134 (233)
Q Consensus 68 ~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i 134 (233)
..+ |++++.+ .+.|+.|+|++++.+.++++|.||||+++|++|+|+|+|++ ..++.+|||+|+|
T Consensus 175 ~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i 251 (373)
T PRK14301 175 QSQ---GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVI 251 (373)
T ss_pred EEe---eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEE
Confidence 443 3333222 78899999999999999999999999999999999999998 4467789999999
Q ss_pred EecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEE
Q 026801 135 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 214 (233)
Q Consensus 135 ~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v 214 (233)
.+++|+.|+|+|+||+++++|+|++|++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+++.+|||||+|+|
T Consensus 252 ~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V 330 (373)
T PRK14301 252 TVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSV 330 (373)
T ss_pred EEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999997 999999999999999999999998765557999999999
Q ss_pred ECCCCCCHHHHHHHHHhh
Q 026801 215 LFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 215 ~~P~~l~~~~~~~l~~~~ 232 (233)
.+|+.|+++|+++|++++
T Consensus 331 ~~P~~l~~~q~~~l~~l~ 348 (373)
T PRK14301 331 VTPTKLTKRQEELLREFE 348 (373)
T ss_pred ECCCCCCHHHHHHHHHHH
Confidence 999999999999999986
No 21
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.3e-52 Score=372.81 Aligned_cols=229 Identities=22% Similarity=0.373 Sum_probs=198.4
Q ss_pred cccccccCCCCC-CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEE
Q 026801 2 LVFDSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYH 68 (233)
Q Consensus 2 d~F~~~Fgg~~~-~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~ 68 (233)
|+|++|||+++. ....++++++|+.+.++|||+|+|+|+++++.+.+.+.|+ |+|+ +.|+|+|.+..
T Consensus 125 d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~ 204 (392)
T PRK14279 125 DLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISR 204 (392)
T ss_pred hhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEE
Confidence 345666654321 1123356799999999999999999999999999999999 9875 68999998665
Q ss_pred EEeCCceEEEee----------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEec
Q 026801 69 KQIGPGMFQQMT----------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTA 137 (233)
Q Consensus 69 ~~~~~g~~~~~~----------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~ 137 (233)
.+..++ +++.+ .++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++. .+..+|||+|+|.++
T Consensus 205 ~~g~~~-~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~ 283 (392)
T PRK14279 205 NQGAFG-FSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVR 283 (392)
T ss_pred EecceE-EEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEe
Confidence 542222 22221 889999999999999999999999999999999999999984 456779999999999
Q ss_pred CCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECC
Q 026801 138 PHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFP 217 (233)
Q Consensus 138 ~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P 217 (233)
||+.|+|+|+||+++++|+|.+|++|++++|+|+||+ +.|+||+++++|++++|+|+|||... ..+|||||+|+|.+|
T Consensus 284 ~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~~-~~~GDL~I~~~v~~P 361 (392)
T PRK14279 284 PDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKRS-GGAGDLLVTVKVAVP 361 (392)
T ss_pred cCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCCC-CCCCCEEEEEEEECC
Confidence 9999999999999999999999999999999999996 89999999999999999999999643 347999999999999
Q ss_pred CCCCHHHHHHHHHhhC
Q 026801 218 TTLTEDQKTRIKEVLG 233 (233)
Q Consensus 218 ~~l~~~~~~~l~~~~~ 233 (233)
++|+++|+++|++++.
T Consensus 362 ~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 362 PNLDGAAAEALEAYAE 377 (392)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 9999999999999873
No 22
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.4e-51 Score=367.09 Aligned_cols=211 Identities=23% Similarity=0.409 Sum_probs=193.7
Q ss_pred CCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEEEeCCceEEEee-------
Q 026801 20 VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQMT------- 80 (233)
Q Consensus 20 ~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~~------- 80 (233)
++++|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+...+ |++++.+
T Consensus 116 ~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G 192 (372)
T PRK14300 116 VRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQ---GFFTIEQACHKCQG 192 (372)
T ss_pred CCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEee---ceEEEEEeCCCCCc
Confidence 5789999999999999999999999999999999 8875 6899999865432 4444222
Q ss_pred -----eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEecCCCceeeeCCceEEEEE
Q 026801 81 -----EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVT 154 (233)
Q Consensus 81 -----~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~ 154 (233)
.++|+.|+|++++.+.++++|.||||+++|++|+|+|+|++ .+++.+|||+|+|+++||+.|+|+|+||+++++
T Consensus 193 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~ 272 (372)
T PRK14300 193 NGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLP 272 (372)
T ss_pred cceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEe
Confidence 78999999999999999999999999999999999999998 467789999999999999999999999999999
Q ss_pred ECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhhC
Q 026801 155 VTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 155 i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~~ 233 (233)
|+|++|++|+++.|+|+||+.++|+||+++++|++++|+|+|||..++..+|||||+|+|.+|++|+++|+++|+++++
T Consensus 273 Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~ 351 (372)
T PRK14300 273 ISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351 (372)
T ss_pred cCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999889999999999999999999999976555579999999999999999999999999863
No 23
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-51 Score=366.16 Aligned_cols=227 Identities=28% Similarity=0.486 Sum_probs=200.8
Q ss_pred cccccccC-CCCCC-C-CCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEE
Q 026801 2 LVFDSFFG-GGPME-E-DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEV 66 (233)
Q Consensus 2 d~F~~~Fg-g~~~~-~-~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~ 66 (233)
|+|++||| +++.+ . ..++++++|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+
T Consensus 94 d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 173 (366)
T PRK14294 94 DIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQV 173 (366)
T ss_pred hhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEE
Confidence 67888897 32211 1 12356799999999999999999999999999999999 8874 679999986
Q ss_pred EEEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEE
Q 026801 67 YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFR 133 (233)
Q Consensus 67 ~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~ 133 (233)
.... |+++..+ .+.|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++ ..++.+|||+|+
T Consensus 174 ~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~ 250 (366)
T PRK14294 174 TQSQ---GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVF 250 (366)
T ss_pred EEEe---eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEE
Confidence 5433 3443222 78899999999999999999999999999999999999998 466789999999
Q ss_pred EEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEE
Q 026801 134 IRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFE 213 (233)
Q Consensus 134 i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~ 213 (233)
|.++||+.|+|+|+||++++.|+|++|++|++++|+|+||+ +.|.||+++++|++++|+|+|||..+.+.+|||||+|+
T Consensus 251 i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~ 329 (366)
T PRK14294 251 LTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVE 329 (366)
T ss_pred EEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999996 69999999999999999999999776555799999999
Q ss_pred EECCCCCCHHHHHHHHHhh
Q 026801 214 VLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 214 v~~P~~l~~~~~~~l~~~~ 232 (233)
|.+|+.|+++|+++|++++
T Consensus 330 v~~P~~l~~~q~~ll~~~~ 348 (366)
T PRK14294 330 VKVPTRLTKKQEELLTEFA 348 (366)
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 9999999999999999987
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-50 Score=360.48 Aligned_cols=229 Identities=27% Similarity=0.430 Sum_probs=201.2
Q ss_pred cccccccCCC-C-----C-CCCC-CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC----------CCCCc
Q 026801 2 LVFDSFFGGG-P-----M-EEDE-KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNC 62 (233)
Q Consensus 2 d~F~~~Fgg~-~-----~-~~~~-~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~----------~~C~G 62 (233)
|+|++|||++ + + +..+ .+++++|+.+.|.|||+|+|+|++++|.+.+.+.|+ |+|+ +.|+|
T Consensus 94 d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G 173 (365)
T PRK14290 94 DIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHG 173 (365)
T ss_pred HHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCC
Confidence 6788888852 1 0 1111 123489999999999999999999999999999999 9875 68999
Q ss_pred ccEEEEEEeCCceEEEe--------------eeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCc
Q 026801 63 RNEVYHKQIGPGMFQQM--------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPG 128 (233)
Q Consensus 63 ~G~~~~~~~~~g~~~~~--------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~G 128 (233)
+|.+...+ .+|++++. ..++|+.|+|++++.+.++++|.||||+.+|++|+|+|+|++ +++.+|
T Consensus 174 ~G~~~~~~-~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~G 251 (365)
T PRK14290 174 TGQQRIVR-GQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTG 251 (365)
T ss_pred cCEEEEEe-ccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCC
Confidence 99855443 35554321 178999999999999999999999999999999999999986 678899
Q ss_pred cEEEEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccE
Q 026801 129 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDL 208 (233)
Q Consensus 129 Dl~v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL 208 (233)
||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|+ ++|.||+++++|++++|+|+|||..+...+|||
T Consensus 252 DL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL 330 (365)
T PRK14290 252 DLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDL 330 (365)
T ss_pred CEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCCCCCCCCCCCCE
Confidence 9999999999999999999999999999999999999999999995 999999999999999999999997665557999
Q ss_pred EEEEEEECCCCCCHHHHHHHHHhhC
Q 026801 209 YITFEVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 209 ~v~~~v~~P~~l~~~~~~~l~~~~~ 233 (233)
||+|+|.+|+.|+++|+++|+++++
T Consensus 331 ~V~~~V~~P~~l~~~~~~ll~~~~~ 355 (365)
T PRK14290 331 LVRINVEVPKRLTSKQKELIREFFD 355 (365)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999873
No 25
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-50 Score=358.34 Aligned_cols=213 Identities=29% Similarity=0.458 Sum_probs=196.2
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-EEEeCCceEEEee-----
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY-HKQIGPGMFQQMT----- 80 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~-~~~~~~g~~~~~~----- 80 (233)
++++.|+.+.+.|||+|+|+|+++++.+++.+.|+ |.|+ +.|+|+|.+. ..+.++|++++..
T Consensus 116 ~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C 195 (378)
T PRK14283 116 PQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDC 195 (378)
T ss_pred ccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCC
Confidence 46799999999999999999999999999999999 8874 6899999955 4567777775444
Q ss_pred -------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEecCCCceeeeCCceEEE
Q 026801 81 -------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 81 -------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
.+.|..|+|++++.+.++++|.||||+++|++++|+|+|++ ..++.+|||+|+|++++|+.|+|+|+||+++
T Consensus 196 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~ 275 (378)
T PRK14283 196 QGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYE 275 (378)
T ss_pred CccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEE
Confidence 77899999999999999999999999999999999999998 4567899999999999999999999999999
Q ss_pred EEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhh
Q 026801 153 VTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 153 ~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
+.|+|++|++|++++|+|+|| .+.|.||+++++|++++|+|+|||....+.+|||||+|+|.||++|+++|+++|++++
T Consensus 276 ~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~ 354 (378)
T PRK14283 276 KPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLREFA 354 (378)
T ss_pred EecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 999999999999999999999 6899999999999999999999997665557999999999999999999999999986
No 26
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-50 Score=359.43 Aligned_cols=229 Identities=23% Similarity=0.386 Sum_probs=204.6
Q ss_pred cccccccCCCCCC---CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC------------CCCCcccE
Q 026801 2 LVFDSFFGGGPME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------------RRCNCRNE 65 (233)
Q Consensus 2 d~F~~~Fgg~~~~---~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~------------~~C~G~G~ 65 (233)
|+|++|||+++++ ...+++++.|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|+
T Consensus 89 d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 168 (371)
T PRK14292 89 DIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGA 168 (371)
T ss_pred HHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccE
Confidence 6789999864211 113356799999999999999999999999999999999 9774 57999999
Q ss_pred EE-EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEE
Q 026801 66 VY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKF 132 (233)
Q Consensus 66 ~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v 132 (233)
+. ..++.+|++++.+ ...|+.|+|++++.+.++++|.||+|+++|++|+|+|+|++.+++. |||+|
T Consensus 169 ~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v 247 (371)
T PRK14292 169 VRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYV 247 (371)
T ss_pred EEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEE
Confidence 55 4456678876444 7899999999999999999999999999999999999999866555 99999
Q ss_pred EEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEE
Q 026801 133 RIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITF 212 (233)
Q Consensus 133 ~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~ 212 (233)
+|++++|+.|+|+|+||++++.|+|++|++|+++.|+|+||+ ..|.||+++++|++++|+|+|||..++..+|||||+|
T Consensus 248 ~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~ 326 (371)
T PRK14292 248 HIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEY 326 (371)
T ss_pred EEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEE
Confidence 999999999999999999999999999999999999999997 5899999999999999999999977655579999999
Q ss_pred EEECCCCCCHHHHHHHHHhh
Q 026801 213 EVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 213 ~v~~P~~l~~~~~~~l~~~~ 232 (233)
+|.+|+.|+++|+++|++++
T Consensus 327 ~v~~P~~l~~~q~~ll~~~~ 346 (371)
T PRK14292 327 EIAVPKQLSPEAREALEAYA 346 (371)
T ss_pred EEECCCCCCHHHHHHHHHHH
Confidence 99999999999999999986
No 27
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-50 Score=360.41 Aligned_cols=231 Identities=22% Similarity=0.420 Sum_probs=204.7
Q ss_pred cccccccCCC-CCC------CCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCc
Q 026801 2 LVFDSFFGGG-PME------EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNC 62 (233)
Q Consensus 2 d~F~~~Fgg~-~~~------~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G 62 (233)
|+|++|||+. +.+ ...++++++|+.+.+.|||+|+|+|+++++.+++.+.|. |.|+ +.|+|
T Consensus 89 d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G 168 (374)
T PRK14293 89 DIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGG 168 (374)
T ss_pred HHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCC
Confidence 6788899741 111 112345789999999999999999999999999999999 8774 67999
Q ss_pred ccEEE-EEEeCCceEEEee------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCc
Q 026801 63 RNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPG 128 (233)
Q Consensus 63 ~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~G 128 (233)
+|.+. ..++++|++++.+ ++.|+.|.|.+++.+.++++|.||||+++|++|+|+|+|++ ..+..+|
T Consensus 169 ~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~G 248 (374)
T PRK14293 169 AGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPG 248 (374)
T ss_pred cceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCc
Confidence 99954 4567888877544 77899999999999999999999999999999999999998 4566789
Q ss_pred cEEEEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCC-CCcc
Q 026801 129 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGD 207 (233)
Q Consensus 129 Dl~v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~-~~Gd 207 (233)
||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+ +.|.||+++++|++++|+|+|||..+.. .+||
T Consensus 249 DL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GD 327 (374)
T PRK14293 249 DLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGD 327 (374)
T ss_pred CEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999996 8999999999999999999999976543 4699
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHhhC
Q 026801 208 LYITFEVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 208 L~v~~~v~~P~~l~~~~~~~l~~~~~ 233 (233)
|||+|+|.+|+.|+++|+++|+++++
T Consensus 328 L~v~~~v~~P~~l~~~~~~l~~~l~~ 353 (374)
T PRK14293 328 HLITVKVKIPTRISDEERELLEKLAK 353 (374)
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999873
No 28
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-49 Score=357.05 Aligned_cols=212 Identities=26% Similarity=0.459 Sum_probs=192.6
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEEEeCCceEEEee------
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQMT------ 80 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~~------ 80 (233)
+++++|+.+.+.|||+|+|+|+++++.+.+.+.|. |+|+ +.|+|+|.+...+ |++++.+
T Consensus 126 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~ 202 (382)
T PRK14291 126 PVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRG---GFFRISQTCPTCG 202 (382)
T ss_pred ccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEec---ceEEEEecCCCCC
Confidence 44789999999999999999999999999999999 8874 6899999865442 2332221
Q ss_pred -----eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEecCCCceeeeCCceEEEEE
Q 026801 81 -----EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVT 154 (233)
Q Consensus 81 -----~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~ 154 (233)
.+.|+.|+|.+++.+.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|+++||+.|+|+|+||++++.
T Consensus 203 G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~ 282 (382)
T PRK14291 203 GEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVN 282 (382)
T ss_pred CceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEE
Confidence 78999999999999999999999999999999999999998 457889999999999999999999999999999
Q ss_pred ECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCC--CCC------HHHHH
Q 026801 155 VTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT--TLT------EDQKT 226 (233)
Q Consensus 155 i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~--~l~------~~~~~ 226 (233)
|+|++|++|+++.|+|+||+.++|+||+++++|++++|+|+|||..+...+|||||+|+|.||+ .|+ ++|++
T Consensus 283 Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~ 362 (382)
T PRK14291 283 ITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKK 362 (382)
T ss_pred eeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCcCcCccccCCHHHHH
Confidence 9999999999999999999889999999999999999999999987655579999999999998 599 99999
Q ss_pred HHHHhhC
Q 026801 227 RIKEVLG 233 (233)
Q Consensus 227 ~l~~~~~ 233 (233)
+|+++.+
T Consensus 363 ~~~~l~~ 369 (382)
T PRK14291 363 LLKELDK 369 (382)
T ss_pred HHHHHHh
Confidence 9999863
No 29
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-49 Score=352.95 Aligned_cols=214 Identities=22% Similarity=0.379 Sum_probs=196.7
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEE-EEEeCCceEEEee-----
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVY-HKQIGPGMFQQMT----- 80 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~-~~~~~~g~~~~~~----- 80 (233)
+.++.|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+ +.|+|+|.+. ..+.++|+++..+
T Consensus 124 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C 203 (386)
T PRK14289 124 VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTC 203 (386)
T ss_pred CCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCC
Confidence 45789999999999999999999999999999999 8775 6899999955 4467778875433
Q ss_pred -------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceEEE
Q 026801 81 -------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 81 -------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
...|+.|.|++++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|.+++|+.|+|+++||+++
T Consensus 204 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~ 283 (386)
T PRK14289 204 NGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYN 283 (386)
T ss_pred CccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEE
Confidence 778999999999999999999999999999999999999984 577899999999999999999999999999
Q ss_pred EEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhh
Q 026801 153 VTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 153 ~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
+.|+|.+|++|+++.|+|+||+ +.|.||+++++|+++||+|+|||..++..+|||||+|+|.||++|+++|+++|++++
T Consensus 284 ~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~ 362 (386)
T PRK14289 284 LLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLEKME 362 (386)
T ss_pred eccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 9999999999999999999996 899999999999999999999997665557999999999999999999999999987
Q ss_pred C
Q 026801 233 G 233 (233)
Q Consensus 233 ~ 233 (233)
+
T Consensus 363 ~ 363 (386)
T PRK14289 363 N 363 (386)
T ss_pred h
Confidence 3
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.4e-46 Score=321.72 Aligned_cols=226 Identities=36% Similarity=0.664 Sum_probs=208.9
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC----------CCCCcccE-EEEEEe
Q 026801 4 FDSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNE-VYHKQI 71 (233)
Q Consensus 4 F~~~Fgg~~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~----------~~C~G~G~-~~~~~~ 71 (233)
|++||+.|+.++ +++.+++|+.+.+.|||+|+|.|.++++.++++.+|+ |+|. ..|+|+|. +...++
T Consensus 83 f~~~F~~g~~~~-~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~ 161 (337)
T KOG0712|consen 83 FSQFFGFGGNGG-RGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQM 161 (337)
T ss_pred HHHhccCCCcCc-cccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEec
Confidence 788888654333 3334499999999999999999999999999999999 9875 68999999 667789
Q ss_pred CCceEEEee---------------eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEe
Q 026801 72 GPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRT 136 (233)
Q Consensus 72 ~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v 136 (233)
+||+.|+++ ++.|+.|.|.+++.+.+.++|.|++|+++++++.+.+++++.++..+||+++.+..
T Consensus 162 gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~ 241 (337)
T KOG0712|consen 162 GPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQ 241 (337)
T ss_pred cccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecc
Confidence 999998877 78999999999999999999999999999999999999999888889999999999
Q ss_pred cCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeC--CCCCCCcEEEECCCCcCCCCCCCCccEEEEEEE
Q 026801 137 APHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 214 (233)
Q Consensus 137 ~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~--~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v 214 (233)
++|+.|.|+++||++..+|++.+|++|+.+.+.|+||+.+++.++ ++++||++++|+|+|||...++ .|||||+|+|
T Consensus 242 k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v 320 (337)
T KOG0712|consen 242 KEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEV 320 (337)
T ss_pred cccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEE
Confidence 999999999999999999999999999999999999999999866 5889999999999999999887 9999999999
Q ss_pred ECCCCCCHHHHHHHHHhh
Q 026801 215 LFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 215 ~~P~~l~~~~~~~l~~~~ 232 (233)
+||+ +++++..+|+++|
T Consensus 321 ~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 321 KFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred EcCC-CChHHHHHHHhhC
Confidence 9999 9999999999876
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-41 Score=290.58 Aligned_cols=177 Identities=31% Similarity=0.454 Sum_probs=158.1
Q ss_pred cccccccCCC-CCCC--------CCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeC
Q 026801 2 LVFDSFFGGG-PMEE--------DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIG 72 (233)
Q Consensus 2 d~F~~~Fgg~-~~~~--------~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~ 72 (233)
|+|++|||++ +.++ ...+++|.|+.+.+.|||+|++.|+++++.+.
T Consensus 100 d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~------------------------- 154 (291)
T PRK14299 100 DFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA------------------------- 154 (291)
T ss_pred HHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC-------------------------
Confidence 6788899852 1111 12356799999999999999999999998763
Q ss_pred CceEEEeeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCceEEE
Q 026801 73 PGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 73 ~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
.++++|+||||+++|++|+++|+|++. |||+|+|.+++|+.|+|+|+||+++
T Consensus 155 -----------------------g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v~~h~~f~R~G~DL~~~ 206 (291)
T PRK14299 155 -----------------------GERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYAT 206 (291)
T ss_pred -----------------------CEEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEEcCCCCeEEECCEEEEE
Confidence 468899999999999999999999852 9999999999999999999999999
Q ss_pred EEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhh
Q 026801 153 VTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 153 ~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
++|++++|++|+++.|+|+||+ ++|+||+++++|++++|+|+|||... +.+|||||+|+|.+|+.|+++|+++|++++
T Consensus 207 ~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~~-~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~ 284 (291)
T PRK14299 207 VDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRGP-AGRGDQYAEVRITIPTRPTPEEERLYKQLA 284 (291)
T ss_pred EecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999999999996 89999999999999999999999643 357999999999999999999999999986
Q ss_pred C
Q 026801 233 G 233 (233)
Q Consensus 233 ~ 233 (233)
+
T Consensus 285 ~ 285 (291)
T PRK14299 285 E 285 (291)
T ss_pred h
Confidence 3
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=2.7e-40 Score=289.03 Aligned_cols=195 Identities=22% Similarity=0.344 Sum_probs=165.8
Q ss_pred cccccccCCCCC-CCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEee
Q 026801 2 LVFDSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMT 80 (233)
Q Consensus 2 d~F~~~Fgg~~~-~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~ 80 (233)
|+|+.|||++++ .....+++++|+.+.++|||+|++.|+++++.+.+.+. .|.|.+
T Consensus 96 ~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~---------~g~G~~-------------- 152 (306)
T PRK10266 96 DIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVY---------NAFGMI-------------- 152 (306)
T ss_pred HHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecccc---------cCCCeE--------------
Confidence 467778875321 11233457899999999999999999999999875432 222211
Q ss_pred eccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceEEEEEECHhh
Q 026801 81 EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQ 159 (233)
Q Consensus 81 ~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~i~l~~ 159 (233)
.....++++|.||+|+++|++++++|+|++. .+..+|||+|+++++||+.|+|+|+||+++++|++++
T Consensus 153 -----------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~ 221 (306)
T PRK10266 153 -----------EQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWE 221 (306)
T ss_pred -----------EEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHH
Confidence 0112468999999999999999999999984 4567899999999999999999999999999999999
Q ss_pred hccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHHHhhC
Q 026801 160 ALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 233 (233)
Q Consensus 160 al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~~~ 233 (233)
|++|++++|+|++|+ +.|+||+++++|++++|+|+|||..+ .+|||||+|+|.+|++|+++|+++|+++++
T Consensus 222 al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~--~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~ 292 (306)
T PRK10266 222 AALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIVMPPKPDEKTAALWQQLAD 292 (306)
T ss_pred HhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC--CCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999996 89999999999999999999999753 479999999999999999999999999863
No 33
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=1.5e-34 Score=269.13 Aligned_cols=161 Identities=15% Similarity=0.153 Sum_probs=143.9
Q ss_pred CCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEE
Q 026801 21 KGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVT 100 (233)
Q Consensus 21 ~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~ 100 (233)
..-+|.+.+.|||+++|+|++++|.+.|.+.|. .|...+.+.++++
T Consensus 655 ~~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g----------------------------------~G~ktvkE~ktLe 700 (871)
T TIGR03835 655 TNVNLVYEEEVPQILFFNNQIKEIKYTRHTVDG----------------------------------NTESTTNEAITLE 700 (871)
T ss_pred cccceEEecccCHHHHhCCCeEEEEEEEeeccC----------------------------------CCcceeeeeEEEE
Confidence 356899999999999999999999999877652 2334566788999
Q ss_pred EEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEe
Q 026801 101 VDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIST 180 (233)
Q Consensus 101 V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i 180 (233)
|+||||+++|++|+|+|+|++.+++ +|||+|+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ ++|+|
T Consensus 701 VkIPpGVkdGqkIRf~GeGDegpgg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkI 778 (871)
T TIGR03835 701 IQLPITSQLNISAIFKGFGHDFGNG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRI 778 (871)
T ss_pred EecCCCCCCCCEEEeccccCCCCCC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEee
Confidence 9999999999999999999986555 499999999999999999999999999999999999999999999996 89999
Q ss_pred CCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEE-CCC
Q 026801 181 KGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL-FPT 218 (233)
Q Consensus 181 ~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~-~P~ 218 (233)
|+++++|+++||+|+|||..+ ..+|||||+|+|. +++
T Consensus 779 PpgTqpGqvLRIkGKGMP~~~-~~RGDLyV~f~V~~~~k 816 (871)
T TIGR03835 779 PGGIKVNDQVIFKDLGLTKTK-YDKGSLIVHLYYSSVMK 816 (871)
T ss_pred CCCCCCCcEEEECCCCCCCCC-CCCCCEEEEEEEeeccc
Confidence 999999999999999999543 3479999999987 444
No 34
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.90 E-value=1.4e-23 Score=148.91 Aligned_cols=80 Identities=35% Similarity=0.543 Sum_probs=69.6
Q ss_pred ceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCC-CCccEEEEEEEECCCCCCHHHHH
Q 026801 148 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKT 226 (233)
Q Consensus 148 dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~-~~GdL~v~~~v~~P~~l~~~~~~ 226 (233)
||+++++|++++|++|++++|+|+||+.++|++|+++++|++++|+|+|||...++ .+|||||+|+|.+|++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 79999999999999999999999999889999999999999999999999988776 57999999999999999999987
Q ss_pred H
Q 026801 227 R 227 (233)
Q Consensus 227 ~ 227 (233)
+
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 5
No 35
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.5e-20 Score=161.89 Aligned_cols=221 Identities=48% Similarity=0.818 Sum_probs=198.9
Q ss_pred cccccccCCC-----CCCCCCCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceE
Q 026801 2 LVFDSFFGGG-----PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMF 76 (233)
Q Consensus 2 d~F~~~Fgg~-----~~~~~~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~ 76 (233)
++|+.||+.. +-......++|.++...++.+++++|.|......-.+.+.|.|+|+..|+.+=....++.++|.+
T Consensus 101 ~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~ 180 (336)
T KOG0713|consen 101 DIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRF 180 (336)
T ss_pred chHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChh
Confidence 6778887632 11123447889999999999999999999999888889999999999999998888889999999
Q ss_pred EEeeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCceEEEEEEC
Q 026801 77 QQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVT 156 (233)
Q Consensus 77 ~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~i~ 156 (233)
++.|...|..|.+.++..+....++.+..|...+....+..+|.+..-+.+||+++.+..-+|+.|.|+++|+++++.++
T Consensus 181 ~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~s 260 (336)
T KOG0713|consen 181 QMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTIS 260 (336)
T ss_pred hhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHH
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred HhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCC-CccEEEEEEEECCCC-CCH
Q 026801 157 LVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK-KGDLYITFEVLFPTT-LTE 222 (233)
Q Consensus 157 l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~-~GdL~v~~~v~~P~~-l~~ 222 (233)
+.+++.|...++.++|+..+.++.-..+.|+..++.+++|||..+... .|.+|+.|.+.+|.+ ++.
T Consensus 261 l~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 261 LEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred HHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 999999999999999998778888889999999999999999766544 499999999999965 554
No 36
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=2.2e-13 Score=118.05 Aligned_cols=133 Identities=18% Similarity=0.285 Sum_probs=111.1
Q ss_pred CCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeC-CCCC-----------CCCCcccEEEEE-EeCCceE--------EE
Q 026801 20 VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHK-QIGPGMF--------QQ 78 (233)
Q Consensus 20 ~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~-c~g~-----------~~C~G~G~~~~~-~~~~g~~--------~~ 78 (233)
..+.+.++.+.++|++|..|+.+.+.+.....|. |.+. ..|.|+|.+... ...+.+. ..
T Consensus 135 ~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~ 214 (288)
T KOG0715|consen 135 VPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGL 214 (288)
T ss_pred ccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCcccccccccCCcceeecccccccce
Confidence 3467888999999999999999999999999999 8665 679999954332 2223222 11
Q ss_pred eeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCceEEEEEECHh
Q 026801 79 MTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLV 158 (233)
Q Consensus 79 ~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~~i~l~ 158 (233)
...+.|..|.|.+.+...+.+.|.+|+|+.++.+|++.+.+.. ||.|.+.|.+++.|+|+|.|+++...|++.
T Consensus 215 ~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~ 287 (288)
T KOG0715|consen 215 VLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFT 287 (288)
T ss_pred eccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-------eEEEEEEeccCcccccccCccccccccccc
Confidence 1155599999999999999999999999999999999998753 999999999999999999999999999875
Q ss_pred h
Q 026801 159 Q 159 (233)
Q Consensus 159 ~ 159 (233)
+
T Consensus 288 ~ 288 (288)
T KOG0715|consen 288 Q 288 (288)
T ss_pred C
Confidence 3
No 37
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=2e-11 Score=109.61 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=75.8
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||+||+.|+++.|... ..++
T Consensus 272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~ 304 (369)
T PRK14282 272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP-----------------------------------------------EGGT 304 (369)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEeCC-----------------------------------------------CCcE
Confidence 46799999999999999999999988853 2457
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceEEE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
++|+||+|+++|++++++|+|++. .+..+|||||++.+..|+.|++++.+|+.+
T Consensus 305 i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 305 TMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 899999999999999999999984 345689999999999999999999887543
No 38
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.16 E-value=1e-10 Score=82.78 Aligned_cols=72 Identities=22% Similarity=0.450 Sum_probs=56.3
Q ss_pred cEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 24 DVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 24 di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
|++.+++|||.||+.|++++|+.. ..++++|+|
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l-----------------------------------------------~g~~~~i~i 33 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL-----------------------------------------------DGKTIKIKI 33 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T-----------------------------------------------TS-EEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC-----------------------------------------------CCCEEEEec
Confidence 789999999999999999888753 246899999
Q ss_pred cCCCCCCcEEEEcccCCC-CCCC-CCccEEEEEEecCCCce
Q 026801 104 EKGMQDGQEVVFYEDGEP-KIDG-EPGDLKFRIRTAPHDRF 142 (233)
Q Consensus 104 p~G~~~g~~i~~~g~G~~-~~~~-~~GDl~v~i~v~~~~~f 142 (233)
|+|+++|+.++++|+|.+ ..+. ..|||+|++++.-+..+
T Consensus 34 p~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~l 74 (81)
T PF01556_consen 34 PPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKL 74 (81)
T ss_dssp TST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SST
T ss_pred cCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence 999999999999999997 3443 79999999999854433
No 39
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=8e-11 Score=105.65 Aligned_cols=87 Identities=21% Similarity=0.299 Sum_probs=76.0
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|+++.|... ..+
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~~------------------------------------------------~g~ 297 (365)
T PRK14290 266 QRINDDLYVDQKINFPQAALGGEIEIKLF------------------------------------------------REK 297 (365)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEEcC------------------------------------------------Cce
Confidence 46799999999999999999999988853 346
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCceEEEE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTV 153 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~ 153 (233)
++|+||+|+++|++++++|+|++.+ +..+|||||++++..++.|++++.+|+.++
T Consensus 298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999999843 346899999999999999999988876553
No 40
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.10 E-value=1.2e-10 Score=104.58 Aligned_cols=87 Identities=22% Similarity=0.290 Sum_probs=74.3
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.++|.|+++++.|||.||+.|.++.|... ..
T Consensus 259 F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dG 290 (366)
T PRK14294 259 FERDGNDVHCKVPISFVQAALGAQIEVPTL------------------------------------------------EG 290 (366)
T ss_pred ceecCCCEEEEEEeCHHHHhCCCeEEEECC------------------------------------------------CC
Confidence 356799999999999999999999888853 22
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCceEEE
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
.++|.||+|+++|++++++|+|++.+ +..+|||||++++..|+.|.+++.+++.+
T Consensus 291 ~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 291 ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 46999999999999999999999843 34689999999999999999888776544
No 41
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=3.9e-10 Score=98.23 Aligned_cols=73 Identities=23% Similarity=0.372 Sum_probs=66.3
Q ss_pred eeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCC
Q 026801 142 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLT 221 (233)
Q Consensus 142 f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~ 221 (233)
+.|+|.|+++++.|+|.||++|+++.| +++|+.++|+||+++++|++++++|+|++. |||||+|+|..++.+.
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~ 197 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFR 197 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC------CCEEEEEEEcCCCCeE
Confidence 357899999999999999999999998 678888999999999999999999999972 9999999999877654
No 42
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=1.9e-10 Score=103.23 Aligned_cols=85 Identities=16% Similarity=0.334 Sum_probs=73.3
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.+++.|++.++.|||.||+.|.++.|+.. ..++
T Consensus 262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~~ 294 (365)
T PRK14285 262 KRNGKDLYATLPISFTQAALGKEIKIQTI-----------------------------------------------ASKK 294 (365)
T ss_pred EEeccceEEEEecCHHHHhCCCEEEEECC-----------------------------------------------CCCE
Confidence 46799999999999999999999988863 2357
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCC-CCCccEEEEEEecCCCceeeeCCceE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLH 150 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~~-~~~GDl~v~i~v~~~~~f~r~g~dl~ 150 (233)
++|+||+|+++|++++++|+|++.++ ...|||+|++++..|+.|.+++..++
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 89999999999999999999998443 34699999999999999988776554
No 43
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=3e-10 Score=102.85 Aligned_cols=86 Identities=24% Similarity=0.324 Sum_probs=72.3
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||+||+.|++++|+.. .+...
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----------------------------------------------d~g~~ 307 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL----------------------------------------------LKEGT 307 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec----------------------------------------------CCCcE
Confidence 56799999999999999999999988853 11357
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCceE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLH 150 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl~ 150 (233)
++|+||+|+++|++++++|+|++.. +..+|||||+|++..++.+..+...++
T Consensus 308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 360 (391)
T PRK14284 308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELL 360 (391)
T ss_pred EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence 8999999999999999999999843 456899999999998887776665554
No 44
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.04 E-value=2.2e-10 Score=103.16 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=74.1
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||.||+.|+++.|+.. ...
T Consensus 261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dG~ 292 (377)
T PRK14298 261 ERVGDDIISEIPISFTQAALGADIMVPTL------------------------------------------------YGK 292 (377)
T ss_pred EEEcCcEEEEEEeCHHHHhCCCeEEEecC------------------------------------------------CCC
Confidence 46799999999999999999999888753 223
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceEEEE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTV 153 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~ 153 (233)
++|+||+|+++|++++++|+|++. .+..+|||||++++..++.+++++.+|+.++
T Consensus 293 i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 293 VKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999999984 3345799999999999998988887776443
No 45
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.03 E-value=3.1e-10 Score=102.10 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=74.8
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|++.++.|||.||+.|+++.|+.. ..+
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------------------------------------------------dG~ 289 (371)
T PRK10767 258 ERDGNDLYCEVPISFTTAALGGEIEVPTL------------------------------------------------DGR 289 (371)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------------------------------------------------CCc
Confidence 46799999999999999999999888743 226
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceEEEE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTV 153 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~~ 153 (233)
++|.||+|+++|++++++|+|.+. .+..+|||||+++|..++.|++++.+|+.++
T Consensus 290 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 290 VKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 899999999999999999999984 3456899999999999999999888776543
No 46
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=4.3e-10 Score=101.11 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=71.5
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|++.++.|||.||+.|+++.|... ...
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------------------------------------------------dg~ 289 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL------------------------------------------------NGK 289 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEcC------------------------------------------------CCC
Confidence 46799999999999999999999888753 234
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCceE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLH 150 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl~ 150 (233)
++|+||+|+++|++++++|+|.+. .+..+|||||+|++..++.+.++...++
T Consensus 290 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 290 VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred EEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 799999999999999999999984 3456799999999999988877665544
No 47
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.98 E-value=7.5e-10 Score=99.63 Aligned_cols=84 Identities=23% Similarity=0.369 Sum_probs=70.2
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||.||+.|.++.|+.. ...
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------------------------------------------------dG~ 291 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------------------------------------------------DDP 291 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------------------------------------------------Ccc
Confidence 56799999999999999999999888753 223
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCceE
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLH 150 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl~ 150 (233)
++|+||+|+++|++++++|+|.+.. +..+|||||++++..++.+..+..+++
T Consensus 292 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l 344 (373)
T PRK14301 292 VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELL 344 (373)
T ss_pred EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 8999999999999999999999843 345899999999998877766554443
No 48
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.97 E-value=8.3e-10 Score=98.75 Aligned_cols=83 Identities=22% Similarity=0.385 Sum_probs=70.6
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|++..+.|||.||+.|+++.|... ..+
T Consensus 263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l------------------------------------------------dG~ 294 (354)
T TIGR02349 263 ERDGNDLYIEVPISFTQAILGGEIEVPTL------------------------------------------------DGD 294 (354)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------------------------------------------------Cce
Confidence 46789999999999999999999888753 226
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCCce
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNL 149 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~dl 149 (233)
++|.||+|+++|++++++|+|++.. +..+|||||++++..++.++++..++
T Consensus 295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 295 VKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred EEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 8999999999999999999999843 34689999999999888777766444
No 49
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.96 E-value=2e-09 Score=96.83 Aligned_cols=82 Identities=22% Similarity=0.343 Sum_probs=69.7
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||.||+.|.++.|+.. ..+.
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l-----------------------------------------------dg~~ 293 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPVI-----------------------------------------------EGGK 293 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence 46799999999999999999999988863 2357
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCceeeeCC
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGN 147 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~r~g~ 147 (233)
++|+||+|+++|++++++|+|++.+ +..+|||||++++..+..+.-+..
T Consensus 294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk 343 (372)
T PRK14300 294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQR 343 (372)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence 9999999999999999999999843 456899999999998876655443
No 50
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.95 E-value=2.8e-09 Score=96.47 Aligned_cols=77 Identities=27% Similarity=0.380 Sum_probs=66.2
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||.||+.|.++.|+.. ..+
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------------------------------------------------dg~ 320 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------------------------------------------------DGP 320 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEcC------------------------------------------------Cce
Confidence 56799999999999999999999888753 235
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCcee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~ 143 (233)
++|+||+|+++|++++++|+|++..+..+|||||+|++.-++...
T Consensus 321 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~Ls 365 (392)
T PRK14279 321 VGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLD 365 (392)
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence 899999999999999999999986556689999999998665433
No 51
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.93 E-value=1.4e-09 Score=97.83 Aligned_cols=84 Identities=18% Similarity=0.273 Sum_probs=70.4
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.++|.|++++++|||.||+.|+++.|+.. ...
T Consensus 253 f~R~G~DL~~~~~Isl~eAllG~~i~v~tL-----------------------------------------------dG~ 285 (369)
T PRK14288 253 FKREGCDLFIEAPVFFTTIALGHTIKVPSL-----------------------------------------------KGD 285 (369)
T ss_pred cEEeCCEEEEEEecCHHHHhcCCEEEeecC-----------------------------------------------CCC
Confidence 356799999999999999999999888853 234
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCCC-CCccEEEEEEecCCCceeeeCCc
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGNN 148 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~~~~~-~~GDl~v~i~v~~~~~f~r~g~d 148 (233)
.++|+||+|+++|+.++++|+|++.++. ..|||||++++..++.+..+...
T Consensus 286 ~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~ 337 (369)
T PRK14288 286 ELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQE 337 (369)
T ss_pred EEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence 6899999999999999999999985443 46999999999988877655533
No 52
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=3.3e-09 Score=95.92 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=71.0
Q ss_pred eCCceEEEEEECHhhhccCCEEEEEcC-----------------------------------------------------
Q 026801 145 EGNNLHTTVTVTLVQALVGFEKTIEHL----------------------------------------------------- 171 (233)
Q Consensus 145 ~g~dl~~~~~i~l~~al~G~~~~i~tl----------------------------------------------------- 171 (233)
++.|+.+.+.|+|.||+.|++.+|...
T Consensus 126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G 205 (386)
T PRK14289 126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG 205 (386)
T ss_pred CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence 478999999999999999998766432
Q ss_pred -------------------CCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHHHHHHHH
Q 026801 172 -------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIK 229 (233)
Q Consensus 172 -------------------dG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~ 229 (233)
+.+.++|.||+++++|++++|+|+|+|...+...|||||+|+|..|+.+..+..+++.
T Consensus 206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~ 282 (386)
T PRK14289 206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIY 282 (386)
T ss_pred cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeE
Confidence 1135889999999999999999999997655557999999999999998887766543
No 53
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=5.2e-09 Score=94.48 Aligned_cols=75 Identities=23% Similarity=0.405 Sum_probs=64.5
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||+||+.|+++.|... ..+.
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~ 303 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPLL-----------------------------------------------DGKK 303 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence 46799999999999999999999988863 2346
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCC
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHD 140 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~ 140 (233)
++|+||+|+++|++++++|+|++.. +..+|||||++++.-+.
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~ 346 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK 346 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence 8999999999999999999999843 34689999999998543
No 54
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.90 E-value=7.1e-09 Score=90.97 Aligned_cols=78 Identities=17% Similarity=0.303 Sum_probs=64.0
Q ss_pred eeCCceEEEEEECHhhhccCCEEEE----EcCC--C-------cEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEE
Q 026801 144 REGNNLHTTVTVTLVQALVGFEKTI----EHLD--E-------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYI 210 (233)
Q Consensus 144 r~g~dl~~~~~i~l~~al~G~~~~i----~tld--G-------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v 210 (233)
++|.|+++++.|+|.||+.|+..+| ++.+ | +.++|.||+++++|++++++|+|+|...+...|||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v 194 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWL 194 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEE
Confidence 4689999999999999999996544 4444 3 4689999999999999999999999765555799999
Q ss_pred EEEEECCCCCC
Q 026801 211 TFEVLFPTTLT 221 (233)
Q Consensus 211 ~~~v~~P~~l~ 221 (233)
+|+|...+.+.
T Consensus 195 ~i~v~ph~~f~ 205 (306)
T PRK10266 195 VIHIAPHPLFD 205 (306)
T ss_pred EEEEcCCCCeE
Confidence 99998444433
No 55
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.89 E-value=5.3e-09 Score=94.59 Aligned_cols=76 Identities=25% Similarity=0.354 Sum_probs=65.6
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|++++++|||.||+.|.+++|+.. ..++
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~tl-----------------------------------------------dG~~ 314 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPTL-----------------------------------------------GGPP 314 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEECC-----------------------------------------------CCCE
Confidence 46799999999999999999999888642 2347
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCc
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDR 141 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~ 141 (233)
++|+||+|+++|++++++|+|++..++.+|||||+|++.-+..
T Consensus 315 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~ 357 (389)
T PRK14295 315 VTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKD 357 (389)
T ss_pred EEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCC
Confidence 9999999999999999999999855566899999999985543
No 56
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=5.7e-09 Score=94.19 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=65.4
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++.+.|||.||+.|.+++|... ..+
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------------------------------------------------dg~ 297 (380)
T PRK14276 266 ERDGSTIYYTLPISFVQAALGDTVEVPTV------------------------------------------------HGD 297 (380)
T ss_pred eeecceEEEEEecCHHHHhCCCeEEEEcC------------------------------------------------CCc
Confidence 46799999999999999999999988863 234
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCC-CCCCccEEEEEEecCCCcee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~~-~~~~GDl~v~i~v~~~~~f~ 143 (233)
++|+||+|+++|++++++|+|++.. +..+|||||+|++.-+....
T Consensus 298 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~ 343 (380)
T PRK14276 298 VELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLN 343 (380)
T ss_pred EEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCC
Confidence 7999999999999999999999843 45679999999998665443
No 57
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=1.9e-09 Score=97.15 Aligned_cols=87 Identities=18% Similarity=0.258 Sum_probs=73.7
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.+++.|++.+++|||.||+.|.++.|... ..
T Consensus 262 f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------------------------------------------------dG 293 (374)
T PRK14293 262 FRRDGINILSEIKISYLQAILGDTLEVDTV------------------------------------------------DG 293 (374)
T ss_pred cChhhhceEEEeccCHHHHhCCCEEEecCC------------------------------------------------CC
Confidence 346789999999999999999999988864 22
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCCC--CCccEEEEEEecCCCceeeeCCceEEE
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEPKIDG--EPGDLKFRIRTAPHDRFRREGNNLHTT 152 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~~~~~--~~GDl~v~i~v~~~~~f~r~g~dl~~~ 152 (233)
.++|+||+|+++|++++++|+|.+.++. ..|||||++++..++.+++++.+++.+
T Consensus 294 ~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~ 350 (374)
T PRK14293 294 PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEK 350 (374)
T ss_pred CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 3689999999999999999999984333 579999999999998888888776544
No 58
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=3.2e-09 Score=95.51 Aligned_cols=84 Identities=20% Similarity=0.297 Sum_probs=69.1
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|+++.|+.. ..+.
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~~ 298 (372)
T PRK14286 266 ERQGNDLILVRKISLAQAILGAEIEVPTI-----------------------------------------------DGKK 298 (372)
T ss_pred EEecCCEEEEEEECHHHHhCCCEEEEeCC-----------------------------------------------CCCE
Confidence 46799999999999999999999888753 2457
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCce
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNL 149 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl 149 (233)
++|+||+|+++|++++++|+|.+. .+...|||||+|++.-++.+..+..++
T Consensus 299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~ 350 (372)
T PRK14286 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQREL 350 (372)
T ss_pred EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Confidence 899999999999999999999984 334579999999998776555444433
No 59
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=9.1e-09 Score=92.73 Aligned_cols=77 Identities=22% Similarity=0.294 Sum_probs=65.1
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|.++.|... ...
T Consensus 263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dg~ 294 (376)
T PRK14280 263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL------------------------------------------------HGK 294 (376)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------------------------------------------------Cce
Confidence 46799999999999999999999888753 224
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCcee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~ 143 (233)
++|+||+|+++|++++++|+|++. .+...|||||++++..++...
T Consensus 295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls 340 (376)
T PRK14280 295 VKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLT 340 (376)
T ss_pred EEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence 799999999999999999999984 344689999999998665443
No 60
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=9.5e-09 Score=93.23 Aligned_cols=77 Identities=23% Similarity=0.261 Sum_probs=64.9
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|.++.|... ...
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dg~ 313 (397)
T PRK14281 282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL------------------------------------------------DGA 313 (397)
T ss_pred EEecCCEEEEEEecHHHHhcCCeEEeecC------------------------------------------------Ccc
Confidence 46799999999999999999999888853 234
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCcee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~ 143 (233)
++|+||+|+++|++++++|+|.+. .+...|||||+++|.-+....
T Consensus 314 i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls 359 (397)
T PRK14281 314 VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVS 359 (397)
T ss_pred EEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCC
Confidence 799999999999999999999984 344679999999998555433
No 61
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=1.4e-08 Score=91.61 Aligned_cols=80 Identities=23% Similarity=0.335 Sum_probs=66.4
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|+++.|... ....
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------d~~~ 291 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI-----------------------------------------------LDGP 291 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEecC-----------------------------------------------CCCe
Confidence 46799999999999999999999888842 2457
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRRE 145 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~ 145 (233)
++|.||+|+++|++++++|+|++. .+..+|||||+++|.-+..+..+
T Consensus 292 i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~ 339 (378)
T PRK14278 292 SEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHE 339 (378)
T ss_pred EEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHH
Confidence 899999999999999999999984 34568999999999855544333
No 62
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=1.3e-08 Score=91.96 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=64.8
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|+++.|... ...
T Consensus 268 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------------------------------------------------dg~ 299 (380)
T PRK14297 268 KRKGFDIYIDKHISFAKAALGTEIKVPTV------------------------------------------------DGE 299 (380)
T ss_pred EEeCCCEEEEEEeCHHHHhCCCcEEEEcC------------------------------------------------CCc
Confidence 45799999999999999999999888863 234
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCcee
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~ 143 (233)
++|+||+|+++|++++++|+|.+. .+..+|||||+|+|.-+....
T Consensus 300 ~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls 345 (380)
T PRK14297 300 VKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLN 345 (380)
T ss_pred EEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCC
Confidence 799999999999999999999983 345679999999998555433
No 63
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.82 E-value=4.5e-09 Score=93.25 Aligned_cols=83 Identities=24% Similarity=0.360 Sum_probs=70.0
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.|.|.|++.+++|||.+|++|.+..|+.. ..
T Consensus 259 F~R~g~dL~~~~~Is~~~AalG~~i~vptl------------------------------------------------~g 290 (371)
T COG0484 259 FERDGDDLYCEVPISFTEAALGGEIEVPTL------------------------------------------------DG 290 (371)
T ss_pred eEECCCceEeccccCHHHHhcCCEEEEEec------------------------------------------------CC
Confidence 356799999999999999999999888853 22
Q ss_pred EEEEEecCCCCCCcEEEEcccCCC-CCCCCCccEEEEEEecCCCceeeeCCc
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNN 148 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~-~~~~~~GDl~v~i~v~~~~~f~r~g~d 148 (233)
.++|+||||++.|+.++++|+|++ ..+...|||||++.|.-+..+......
T Consensus 291 ~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~ 342 (371)
T COG0484 291 RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKE 342 (371)
T ss_pred CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHH
Confidence 399999999999999999999998 567778999999999877765544433
No 64
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.81 E-value=4.2e-09 Score=94.81 Aligned_cols=84 Identities=18% Similarity=0.232 Sum_probs=69.6
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.++|.|++..+.|||.||+.|+++.|+.. ..
T Consensus 257 f~r~g~dL~~~~~isl~eAl~G~~~~i~tl------------------------------------------------dG 288 (371)
T PRK14292 257 LRREQEHLIYEARIGFAKAALGGQITVPTL------------------------------------------------DG 288 (371)
T ss_pred cccchhceeEEeccCHHHHhCCCeEEEECC------------------------------------------------CC
Confidence 356799999999999999999999888843 11
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCceeeeCCce
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNL 149 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~f~r~g~dl 149 (233)
..+|.||+|+++|++++++|+|++. .+..+|||||++++..++.+..+...|
T Consensus 289 ~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 341 (371)
T PRK14292 289 PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREA 341 (371)
T ss_pred CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 2369999999999999999999984 455689999999999988776655444
No 65
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=2.9e-08 Score=89.75 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=63.1
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|+++.|+.. ...
T Consensus 275 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dG~ 306 (386)
T PRK14277 275 KREGYNVYLEMPITFTDAALGGEIEIPTL------------------------------------------------DGK 306 (386)
T ss_pred EEecCCEEEEEEcCHHHHhCCCEEEEEcC------------------------------------------------CCC
Confidence 46799999999999999999999888753 223
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCc
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDR 141 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~ 141 (233)
++|.||+|+++|++++++|+|.+. .+...|||||+++|.-...
T Consensus 307 ~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~ 350 (386)
T PRK14277 307 VKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKK 350 (386)
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCC
Confidence 799999999999999999999974 3345799999999985543
No 66
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=3.7e-08 Score=88.86 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=63.3
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++|.|+++++.|||.||+.|.++.|... ..+
T Consensus 266 ~r~G~DL~~~~~Isl~eAl~G~~~~i~tl------------------------------------------------dG~ 297 (378)
T PRK14283 266 RREGANLYYEKPISFVQAALGDTVDVPTI------------------------------------------------DGP 297 (378)
T ss_pred EEecCCEEEEEecCHHHHhcCCeEEEEcC------------------------------------------------Cce
Confidence 45689999999999999999999888842 226
Q ss_pred EEEEecCCCCCCcEEEEcccCCCC-CCCCCccEEEEEEecCCCc
Q 026801 99 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDR 141 (233)
Q Consensus 99 ~~V~Ip~G~~~g~~i~~~g~G~~~-~~~~~GDl~v~i~v~~~~~ 141 (233)
++|.||+|+++|++++++|+|.+. .+..+|||||++++.-.+.
T Consensus 298 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~ 341 (378)
T PRK14283 298 VELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKK 341 (378)
T ss_pred EEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCC
Confidence 899999999999999999999973 3446799999999985443
No 67
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=4.6e-08 Score=88.04 Aligned_cols=74 Identities=12% Similarity=0.302 Sum_probs=62.3
Q ss_pred CCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEE
Q 026801 22 GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTV 101 (233)
Q Consensus 22 g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V 101 (233)
|.|++++++|||.||+.|.++.|+.. .. .++|
T Consensus 273 G~DL~~~~~Isl~eAllG~~~~i~tl-----------------------------------------------dG-~~~v 304 (372)
T PRK14296 273 NNDILMTYNISYLDAILGNEIIIKTL-----------------------------------------------DG-DIKY 304 (372)
T ss_pred CCcEEEEEecCHHHHhCCCEEEeeCC-----------------------------------------------CC-CEEE
Confidence 79999999999999999999888853 22 3899
Q ss_pred EecCCCCCCcEEEEcccCCC-C-CCCCCccEEEEEEecCCCcee
Q 026801 102 DIEKGMQDGQEVVFYEDGEP-K-IDGEPGDLKFRIRTAPHDRFR 143 (233)
Q Consensus 102 ~Ip~G~~~g~~i~~~g~G~~-~-~~~~~GDl~v~i~v~~~~~f~ 143 (233)
+||+++++|++++++|+|++ . .....|||||+++|.-++...
T Consensus 305 ~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls 348 (372)
T PRK14296 305 KLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLS 348 (372)
T ss_pred EECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCC
Confidence 99999999999999999997 3 234579999999998555433
No 68
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=1.4e-07 Score=80.99 Aligned_cols=144 Identities=27% Similarity=0.481 Sum_probs=121.0
Q ss_pred CCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEE
Q 026801 22 GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTV 101 (233)
Q Consensus 22 g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V 101 (233)
...+...+.+++++++.++.+...+.+...=.. +...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~ 204 (306)
T KOG0714|consen 159 SPPVEHPLRVSLEDLYKGESKKMKISRQSFTSN----------------------------------GREGSSRSRYLSI 204 (306)
T ss_pred CCCccCCcceeHHHhccccceeeecccccccCC----------------------------------cccccCccceeEE
Confidence 334555666699999999999888864433210 0002345778899
Q ss_pred EecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCceEEE--EEECHhhhccCCEEEEEcCCCcEEEEE
Q 026801 102 DIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTT--VTVTLVQALVGFEKTIEHLDEHLVDIS 179 (233)
Q Consensus 102 ~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl~~~--~~i~l~~al~G~~~~i~tldG~~l~i~ 179 (233)
.+.++++.|+.+.++.+|+..++..+-++++.+..++|..|.+.+.+|... ..+++.+|++|....+++++++.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 284 (306)
T KOG0714|consen 205 SIKPGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLS 284 (306)
T ss_pred eccCCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCc
Confidence 999999999999999999887778899999999999999999999999999 999999999999999999999877777
Q ss_pred eC-CCCCCCcEEEECCCCcCC
Q 026801 180 TK-GITKPKEVRKFGGEGMPL 199 (233)
Q Consensus 180 i~-~~~~~g~~~~i~g~G~p~ 199 (233)
.. ....++...+++++|+|.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 285 INKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ccccccCCCceeeecCCCCCC
Confidence 77 788999999999999985
No 69
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.67 E-value=5.3e-08 Score=88.78 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=66.3
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.|+|.|+++++.|||.||+.|.++.|... ..+.
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL-----------------------------------------------dG~~ 302 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL-----------------------------------------------DGRK 302 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC-----------------------------------------------CCCe
Confidence 56799999999999999999999888753 2346
Q ss_pred EEEEecCC--CCCCcEEEEcccCCCCCC--CCCccEEEEEEecCC--CceeeeC
Q 026801 99 VTVDIEKG--MQDGQEVVFYEDGEPKID--GEPGDLKFRIRTAPH--DRFRREG 146 (233)
Q Consensus 99 ~~V~Ip~G--~~~g~~i~~~g~G~~~~~--~~~GDl~v~i~v~~~--~~f~r~g 146 (233)
++|+||+| +++|+.++++|+|++..+ ...|||||+++|.-+ ..+..+.
T Consensus 303 l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~q 356 (421)
T PTZ00037 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEE 356 (421)
T ss_pred EEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHH
Confidence 89999999 999999999999998433 357999999999855 4444333
No 70
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.61 E-value=9.6e-08 Score=90.90 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeE
Q 026801 18 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGY 97 (233)
Q Consensus 18 ~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~ 97 (233)
-.|+|.|+++.+.|||.+|+.|+++.|... ..
T Consensus 741 FrRdGdDL~~~v~ISL~EALLGgtIeIpTL------------------------------------------------DG 772 (871)
T TIGR03835 741 FQIKNDGLHVAALVDPLVAYNGGIIDVFGP------------------------------------------------NK 772 (871)
T ss_pred eEEECCeEEEEEecCHHHHhcCCEEEeeCC------------------------------------------------CC
Confidence 356799999999999999999999888853 23
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecC
Q 026801 98 FVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAP 138 (233)
Q Consensus 98 ~~~V~Ip~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~ 138 (233)
.++|.||+|+++|+.++++|+|++..++.+|||||++.+..
T Consensus 773 rVkLkIPpgTqpGqvLRIkGKGMP~~~~~RGDLyV~f~V~~ 813 (871)
T TIGR03835 773 LFNVRIPGGIKVNDQVIFKDLGLTKTKYDKGSLIVHLYYSS 813 (871)
T ss_pred CEEEeeCCCCCCCcEEEECCCCCCCCCCCCCCEEEEEEEee
Confidence 48999999999999999999999743456899999999863
No 71
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=97.60 E-value=8.2e-05 Score=60.44 Aligned_cols=48 Identities=19% Similarity=0.378 Sum_probs=41.3
Q ss_pred CCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEcc
Q 026801 58 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE 117 (233)
Q Consensus 58 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~g 117 (233)
+.|+|+|.+... .++|+.|+|.|+++..++..+++ .|+.+|++|++.-
T Consensus 103 ~~C~G~G~~i~~-----------~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~~ 150 (186)
T TIGR02642 103 PRCRGTGLIQRR-----------QRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLKD 150 (186)
T ss_pred CCCCCeeEEecC-----------CCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHHH
Confidence 489999985532 25799999999999999999999 9999999999754
No 72
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.39 E-value=0.00042 Score=61.11 Aligned_cols=75 Identities=17% Similarity=0.232 Sum_probs=63.9
Q ss_pred CCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEE
Q 026801 19 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 98 (233)
Q Consensus 19 ~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 98 (233)
.++++|++....++|.||..|..+.+... ..+.
T Consensus 248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~l-----------------------------------------------dGr~ 280 (337)
T KOG0712|consen 248 DRRGSDLYRKLTISLVEALCGFQRVWETL-----------------------------------------------DGRL 280 (337)
T ss_pred eecccccceeeecchhhccccceEEEEcc-----------------------------------------------CCce
Confidence 56799999999999999999988877721 3568
Q ss_pred EEEEecCC--CCCCcEEEEcccCCCCCCCCCccEEEEEEecCCC
Q 026801 99 VTVDIEKG--MQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD 140 (233)
Q Consensus 99 ~~V~Ip~G--~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~ 140 (233)
+++.++|| +++|++.+++++|++..+...|||||.+.|+-.+
T Consensus 281 l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 281 LKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK 324 (337)
T ss_pred EEEecCCCceeChhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence 99999999 9999999999999994444499999999998554
No 73
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.34 E-value=0.00031 Score=47.49 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=21.7
Q ss_pred CCCCcccEEEEEEeC-CceEEEeeeccCccCCCceEEE
Q 026801 58 RRCNCRNEVYHKQIG-PGMFQQMTEQVCDQCQNVKYER 94 (233)
Q Consensus 58 ~~C~G~G~~~~~~~~-~g~~~~~~~~~C~~C~G~g~~~ 94 (233)
+.|+|+|++...+.. +++++. ...|+.|+|.|.+.
T Consensus 19 ~~C~G~G~~~~~~~~~~~~~~~--~~~C~~C~G~G~~i 54 (66)
T PF00684_consen 19 PQCNGSGQVTRRQQTPGGVFQM--QQTCPKCGGTGKII 54 (66)
T ss_dssp TTSSSSSEEEEEEESSSTTEEE--EEE-TTTSSSSEE-
T ss_pred cCCCCeeEEEEEEeCCCeEEEE--EEECCCCcceeeEE
Confidence 689999996655434 333332 34688888887653
No 74
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.00 E-value=0.017 Score=43.12 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=23.2
Q ss_pred eEeeC-CCCC-----CCCCcccEEEEEEeCCceEEEeeeccCccCCCce
Q 026801 49 NVIKP-APGK-----RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK 91 (233)
Q Consensus 49 ~~~C~-c~g~-----~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g 91 (233)
.+.|. |+|+ +.|+|+|.+...+ ++. ++ ....|+.|+|.|
T Consensus 41 ~v~C~~C~GsG~~~C~~C~G~G~v~~~~-~g~-~q--~~~~C~~C~G~G 85 (111)
T PLN03165 41 TQPCFPCSGTGAQVCRFCVGSGNVTVEL-GGG-EK--EVSKCINCDGAG 85 (111)
T ss_pred CCCCCCCCCCCCcCCCCCcCcCeEEEEe-CCc-EE--EEEECCCCCCcc
Confidence 35687 8776 7899999976444 322 21 244555555554
No 75
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=89.07 E-value=1.2 Score=35.96 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=65.4
Q ss_pred cEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 24 DVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 24 di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
+....+..++.+++.+....+... ......+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~ 182 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARL-----------------------------------------------LGKALKSTI 182 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeecc-----------------------------------------------ccccccccC
Confidence 577788888899888887777653 123334899
Q ss_pred cCCCCCCcEEEEcccCCCCCCCCCccEEEEEEecCCCceeeeCCce
Q 026801 104 EKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNL 149 (233)
Q Consensus 104 p~G~~~g~~i~~~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dl 149 (233)
+.++..+..+++.+.+.... ...++.+..+..++|+.|..+++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (237)
T COG2214 183 KAGALEGKALRLKGLLKSAR-GALGKARLKELSKRHPPFALEGDDK 227 (237)
T ss_pred CcccccCceeeecccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence 99999999999999987655 7789999999999999999999998
No 76
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=85.37 E-value=0.63 Score=44.06 Aligned_cols=9 Identities=11% Similarity=0.117 Sum_probs=6.4
Q ss_pred CCCCcccEE
Q 026801 58 RRCNCRNEV 66 (233)
Q Consensus 58 ~~C~G~G~~ 66 (233)
+.|+|+|..
T Consensus 22 ~vc~gtG~~ 30 (715)
T COG1107 22 PVCHGTGFS 30 (715)
T ss_pred ccccccccc
Confidence 567887764
No 77
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=73.52 E-value=3.4 Score=36.44 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=21.3
Q ss_pred CCCCcccEE-EEEEeCCceEEEeeeccCccCCCceEEEEeEEEEE
Q 026801 58 RRCNCRNEV-YHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTV 101 (233)
Q Consensus 58 ~~C~G~G~~-~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V 101 (233)
..|+|+|.. -....|-| +.+|.+|.|.|-...-..+.|
T Consensus 238 ~~C~G~G~~~C~tC~grG------~k~C~TC~gtgsll~~t~~vV 276 (406)
T KOG2813|consen 238 YMCHGRGIKECHTCKGRG------KKPCTTCSGTGSLLNYTRIVV 276 (406)
T ss_pred hhccCCCcccCCcccCCC------CcccccccCccceeeeEEEEE
Confidence 357777762 23322323 467888888776555444444
No 78
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=72.61 E-value=7.4 Score=29.67 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=36.9
Q ss_pred hcCceEEEEEEeeEeeC-CCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEE
Q 026801 37 YMGGSLKVWREKNVIKP-APGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 115 (233)
Q Consensus 37 ~~G~~~~i~~~~~~~C~-c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~ 115 (233)
+.|....++..|...|. |.....|.-... .+....+...+++.-+.+++.||.+.+
T Consensus 4 v~~~~~~V~~~r~saC~~C~~~~~Cg~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~GD~V~v 60 (135)
T PF04246_consen 4 VEGGIAWVEVQRSSACGSCSASGGCGTGLL-----------------------AKLFSGKPITFRAPNPIGAKVGDRVEV 60 (135)
T ss_pred EeCCEEEEEEccCCcCcccCCCCCCCcchh-----------------------hhhcCCCcEEEEecCCCCCCCCCEEEE
Confidence 45667888888888888 765444441100 001112346777788889999998887
Q ss_pred ccc
Q 026801 116 YED 118 (233)
Q Consensus 116 ~g~ 118 (233)
.-.
T Consensus 61 ~i~ 63 (135)
T PF04246_consen 61 EIP 63 (135)
T ss_pred Eec
Confidence 643
No 79
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=65.12 E-value=3.7 Score=39.14 Aligned_cols=45 Identities=20% Similarity=0.381 Sum_probs=28.3
Q ss_pred eeEeeC-CCCC---------CCCCcccEEEEEEeCCceEEEeeeccCccCCCceE
Q 026801 48 KNVIKP-APGK---------RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKY 92 (233)
Q Consensus 48 ~~~~C~-c~g~---------~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~ 92 (233)
..++|+ |.|+ +.|.|+|.+.....+--.+.+.+.-.|+.|+-+..
T Consensus 52 ~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~~c~~cG~~~~~~~~~lc~~c~~~~~ 106 (715)
T COG1107 52 FEIPCPKCRGKGTVTVYDTCPECGGTGKVLTCDICGDIIVPWEEGLCPECRRKPK 106 (715)
T ss_pred CCCCCCeeccceeEEEEeecccCCCceeEEeeccccceecCcccccChhHhhCCc
Confidence 445677 7665 68888888766544322333333447999998754
No 80
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=53.44 E-value=18 Score=23.26 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=18.4
Q ss_pred CccEEEEEEEECCCC--CCHHHHHH
Q 026801 205 KGDLYITFEVLFPTT--LTEDQKTR 227 (233)
Q Consensus 205 ~GdL~v~~~v~~P~~--l~~~~~~~ 227 (233)
.||+.|-|+|.+|+- +|.++.+.
T Consensus 27 ~gDiTv~f~v~LPEiFtls~~eYea 51 (54)
T PF12991_consen 27 NGDITVAFRVELPEIFTLSEAEYEA 51 (54)
T ss_pred CCCEEEEEEecCCeeEEechhHhHH
Confidence 599999999999995 56655544
No 81
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=52.14 E-value=49 Score=26.23 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=59.5
Q ss_pred ceEEEEEECHhhhccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCC
Q 026801 148 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL 220 (233)
Q Consensus 148 dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l 220 (233)
++...+.++..+++.+....+.-.........++.+...+..+++.+++.... ...++.+.++.+..+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 220 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR--GALGKARLKELSKRHPPF 220 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC--CCcccceeeeeccCCCCc
Confidence 68889999999999998888887777655578999999999999999998766 346999999988866644
No 82
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=49.44 E-value=7.7 Score=39.37 Aligned_cols=40 Identities=18% Similarity=0.357 Sum_probs=26.5
Q ss_pred CCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 58 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 58 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
+.|.|.|.+...+ .| + .-....|+.|+|+++..+. ++|++
T Consensus 740 ~~C~G~G~~~~~~-~f--~-~~~~~~C~~C~G~R~~~e~--l~v~~ 779 (924)
T TIGR00630 740 EACQGDGVIKIEM-HF--L-PDVYVPCEVCKGKRYNRET--LEVKY 779 (924)
T ss_pred CCCccceEEEEEc-cC--C-CCcccCCCCcCCceeChHH--Hhcee
Confidence 5899999977543 11 1 1115799999999987663 44544
No 83
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=49.40 E-value=36 Score=26.76 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=32.3
Q ss_pred cCceEEEEEEeeEeeC-CCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEeEEEEEEecCCCCCCcEEEEc
Q 026801 38 MGGSLKVWREKNVIKP-APGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY 116 (233)
Q Consensus 38 ~G~~~~i~~~~~~~C~-c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~g~~i~~~ 116 (233)
.+....++..|...|. |.....|.- |.+... .-.....+++.-+.+.+.||.+.+.
T Consensus 12 ~~~~a~Ve~~r~saCg~C~a~~gCG~-~~l~~~----------------------~~~~~~~~~v~~~~~~~vGD~V~v~ 68 (154)
T PRK10862 12 QNGIALLRCEVKAGCSSCASRAGCGS-RLLNKL----------------------GPQTTHQLVVPSSQPLVPGQKVELG 68 (154)
T ss_pred ECCEEEEEEecCCCCcCcCCCCCchh-hHHHHh----------------------cCCCceEEEecCCCCCCCCCEEEEe
Confidence 4556777777888887 665444542 110000 0012455777777778888877764
No 84
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=45.00 E-value=25 Score=30.62 Aligned_cols=53 Identities=17% Similarity=0.296 Sum_probs=39.0
Q ss_pred hccCCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCCCCHH
Q 026801 160 ALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTED 223 (233)
Q Consensus 160 al~G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~ 223 (233)
+-.|.. .|..- +.+.|.+|++...+.++++.+.|- .||+|.+.|.....+..+
T Consensus 222 ~~~g~~-~v~~~--k~i~i~~~~g~~~~~~l~~~~~~~--------~~l~v~~~v~~~~~~~r~ 274 (288)
T KOG0715|consen 222 ACSGAG-QVRRA--KDIMIVLPAGVRSADTLRFAGHGN--------DDLFVRLIVAKSPSFRRE 274 (288)
T ss_pred Hhhcch-hhhhh--eeEEeecCcccccccEEEEecCCc--------ceEEEEEEeccCcccccc
Confidence 444444 34333 347889999999999999999764 299999999877766643
No 85
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=44.31 E-value=18 Score=36.94 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=26.4
Q ss_pred CCCCcccEEEEEE-eCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 58 RRCNCRNEVYHKQ-IGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 58 ~~C~G~G~~~~~~-~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
+.|.|.|.+...+ ..+. ....|+.|+|+++..+. ++|++
T Consensus 742 ~~C~G~G~~~~~~~f~~~-----~~~~C~~C~G~R~~~e~--l~v~~ 781 (943)
T PRK00349 742 EACQGDGVIKIEMHFLPD-----VYVPCDVCKGKRYNRET--LEVKY 781 (943)
T ss_pred CcccccceEEEEeccCCC-----ccccCccccCccccccc--eEEEE
Confidence 5899999976543 1111 14689999999987664 44444
No 86
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=43.29 E-value=33 Score=22.56 Aligned_cols=21 Identities=19% Similarity=0.418 Sum_probs=17.9
Q ss_pred EEEEECCCCCCHHHHHHHHHh
Q 026801 211 TFEVLFPTTLTEDQKTRIKEV 231 (233)
Q Consensus 211 ~~~v~~P~~l~~~~~~~l~~~ 231 (233)
..+..||.+||++++..+-.+
T Consensus 17 ~~eL~Fp~~ls~~eRriih~l 37 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLL 37 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHH
Confidence 567889999999999988765
No 87
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=43.22 E-value=70 Score=20.16 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCcEEEEEeCCCCCCCcEEEECCCCc
Q 026801 163 GFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGM 197 (233)
Q Consensus 163 G~~~~i~tldG~~l~i~i~~~~~~g~~~~i~g~G~ 197 (233)
+-...|-|.||.-++|+.++..+-|+.+.+.-.-.
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDI 39 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhh
Confidence 45677889999988999887788888887766443
No 88
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=40.17 E-value=10 Score=33.56 Aligned_cols=32 Identities=13% Similarity=0.253 Sum_probs=18.3
Q ss_pred hhHhcCceEEEEEEeeEe---eC-CCCC-----CCCCcccE
Q 026801 34 EDLYMGGSLKVWREKNVI---KP-APGK-----RRCNCRNE 65 (233)
Q Consensus 34 ~e~~~G~~~~i~~~~~~~---C~-c~g~-----~~C~G~G~ 65 (233)
-.++.|-...+.++...+ |. |.|. +.|+|.|.
T Consensus 169 p~mf~~~~~~~~vphs~~v~~ch~c~gRG~~vc~gc~g~G~ 209 (406)
T KOG2813|consen 169 PGMFSGVAHPAVVPHSMIVTFCHACLGRGAMVCHGCSGSGS 209 (406)
T ss_pred CCcccccccceeccchHhhhhhhcccCCCceeccCcCCCCc
Confidence 345666666666665433 33 4432 67888774
No 89
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=38.25 E-value=3.1 Score=36.84 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=65.7
Q ss_pred CCCCCCCcEEEEEEeehhhHhcCceEEEEEEeeEeeCCCCCCCCCcccEEEEEEeCCceEEEeeeccCccCCCceEEEEe
Q 026801 17 EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREG 96 (233)
Q Consensus 17 ~~~~~g~di~~~l~isl~e~~~G~~~~i~~~~~~~C~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~ 96 (233)
.-.+++.+++..+.+||+++..|.+..+... +.
T Consensus 245 ~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~-----------------------------------------------d~ 277 (336)
T KOG0713|consen 245 RFERKGDDLYTNVTISLEAALVGFEMEILHL-----------------------------------------------DG 277 (336)
T ss_pred ceecCccchhhHHHHHHHHHHHHHHHHhhcc-----------------------------------------------ch
Confidence 4467889999999999999999998877753 35
Q ss_pred EEEEEEecCCCCCCcEEEEcccCCC--CCCCCCccEEEEEEecCCCceeee
Q 026801 97 YFVTVDIEKGMQDGQEVVFYEDGEP--KIDGEPGDLKFRIRTAPHDRFRRE 145 (233)
Q Consensus 97 ~~~~V~Ip~G~~~g~~i~~~g~G~~--~~~~~~GDl~v~i~v~~~~~f~r~ 145 (233)
..+++.-.....++..+...++|++ ..+.+-+.+++++.+..+..+-+.
T Consensus 278 ~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 278 HYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 6677788888889999999999998 355667999999998877554433
No 90
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=38.24 E-value=38 Score=34.00 Aligned_cols=39 Identities=21% Similarity=0.459 Sum_probs=25.6
Q ss_pred CCCCcccEEEEEE-eCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 58 RRCNCRNEVYHKQ-IGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 58 ~~C~G~G~~~~~~-~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
..|.|.|.+.+.+ .-|.+ --+|+.|+|++|..+ +++|+.
T Consensus 734 e~C~GdG~ikIeM~FLpdV-----yv~CevC~GkRYn~E--tLev~y 773 (935)
T COG0178 734 EACQGDGVIKIEMHFLPDV-----YVPCEVCHGKRYNRE--TLEVKY 773 (935)
T ss_pred ccccCCceEEEEeccCCCc-----eeeCCCcCCcccccc--eEEEEE
Confidence 4788999866553 22322 257999999988644 666543
No 91
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=34.70 E-value=3.1e+02 Score=23.87 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=38.3
Q ss_pred ecCCCCCCcEEEEcc-cCCC-CCCCCCccEEEEEEecCCCceeee---------CCceEEEEEECHhhhccCCE
Q 026801 103 IEKGMQDGQEVVFYE-DGEP-KIDGEPGDLKFRIRTAPHDRFRRE---------GNNLHTTVTVTLVQALVGFE 165 (233)
Q Consensus 103 Ip~G~~~g~~i~~~g-~G~~-~~~~~~GDl~v~i~v~~~~~f~r~---------g~dl~~~~~i~l~~al~G~~ 165 (233)
-+.|..+|+.++|+. +|+. ..+.. ...+.++....|... ..-+...+++++..|+.|+-
T Consensus 185 ~~h~l~~gd~V~f~ev~gm~~lN~~~----~~~v~~~~~~~f~i~d~~~~~~y~~gG~~~qvK~~~~~~~~g~~ 254 (286)
T cd01491 185 TRHGFEDGDYVTFSEVEGMTELNGCE----PRKIKVKGPYTFSIGDTSSFSEYIRGGIVTQVKLSPMAAFFGGL 254 (286)
T ss_pred cccCCcCCCEEEEeccCcchhhCCCc----cEEEEECCCCeEEECcCcCcCccccCcEEEEEecccHHHHhhhH
Confidence 378999999999988 5665 33333 356666655556643 12345667777777777764
No 92
>PRK14051 negative regulator GrlR; Provisional
Probab=31.38 E-value=1.8e+02 Score=21.57 Aligned_cols=72 Identities=11% Similarity=0.017 Sum_probs=39.8
Q ss_pred CccEEEEEEecCCCceeeeCCceEEEEEECHhhhccCCEEEEE-cCCCcEEEEEeCCCCCCCcEEEECCCCcCC
Q 026801 127 PGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIE-HLDEHLVDISTKGITKPKEVRKFGGEGMPL 199 (233)
Q Consensus 127 ~GDl~v~i~v~~~~~f~r~g~dl~~~~~i~l~~al~G~~~~i~-tldG~~l~i~i~~~~~~g~~~~i~g~G~p~ 199 (233)
.-|++++++-..|+.-.--+-+--+.+.|+-.-.-.|..+++. |..|. -++.+....+-=..+.|++-|||.
T Consensus 47 d~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~N-ekl~vdv~akFI~~LvI~~~~~~~ 119 (123)
T PRK14051 47 DEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGN-EKLFVDVYAKFIEPLVIKNTGMPQ 119 (123)
T ss_pred cceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCC-cEEEEEEeeeeeeeeEEccCCCcc
Confidence 3678888887766544333333335555552222334444433 33342 244444445556678899999984
No 93
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=29.24 E-value=70 Score=22.66 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=20.8
Q ss_pred EEEEEEEECCC-CCCHHHHHHHHHhh
Q 026801 208 LYITFEVLFPT-TLTEDQKTRIKEVL 232 (233)
Q Consensus 208 L~v~~~v~~P~-~l~~~~~~~l~~~~ 232 (233)
.+.-++|+.|. .||++|++-++.+.
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~~~~~l~ 87 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKEWIDKLR 87 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHHHHHHHH
Confidence 57778889996 69999999998764
No 94
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=28.39 E-value=21 Score=30.27 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=15.7
Q ss_pred eccCccCCCceEEEEeE--EEEEEecC
Q 026801 81 EQVCDQCQNVKYEREGY--FVTVDIEK 105 (233)
Q Consensus 81 ~~~C~~C~G~g~~~~~~--~~~V~Ip~ 105 (233)
...|+.|+|.|++..+. .+---||=
T Consensus 38 ~vtCPTCqGtGrIP~eqe~qLVALIPy 64 (238)
T PF07092_consen 38 SVTCPTCQGTGRIPREQENQLVALIPY 64 (238)
T ss_pred CCcCCCCcCCccCCccchhcEEEEEec
Confidence 35799999988865543 33334553
No 95
>TIGR03829 YokU_near_AblA uncharacterized protein, YokU family. Members of this protein family occur in various species of the genus Bacillus, always next to the gene (kamA or ablA) for lysine 2,3-aminomutase. Members have a pair of CXXC motifs, and share homology to the amino-terminal region of a family of putative transcription factors for which the C-terminal is modeled by pfam01381, a helix-turn-helix domain model. This family, however, is shorter and lacks the helix-turn-helix region. The function of this protein family is unknown, but a regulatory role in compatible solute biosynthesis is suggested by local genome context.
Probab=28.24 E-value=73 Score=22.74 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=19.4
Q ss_pred cCccCCCceEEEEeEEEEEEecCCC
Q 026801 83 VCDQCQNVKYEREGYFVTVDIEKGM 107 (233)
Q Consensus 83 ~C~~C~G~g~~~~~~~~~V~Ip~G~ 107 (233)
.|..|++........++.+..|.|.
T Consensus 1 ~C~~C~~~~~~~~~tTv~~el~~G~ 25 (89)
T TIGR03829 1 KCRWCEEEKAIARTTTVYWELPDGT 25 (89)
T ss_pred CCcccCCCceecceEEEEEEecCCc
Confidence 4899988777777778888887664
No 96
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold. It is found at the N terminus of many but not all myosins. The function of this domain is unknown.; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 2EC6_A 2W4H_M 1O1E_P 1O1D_D 1O18_A 1O1C_P 1O1B_D 1O1F_A 2W4A_M 2W4G_M ....
Probab=26.94 E-value=1.5e+02 Score=17.68 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=23.1
Q ss_pred eeeeCCceEEEEEECHhhhccCCEEEEEcCCCcEEEEE
Q 026801 142 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIS 179 (233)
Q Consensus 142 f~r~g~dl~~~~~i~l~~al~G~~~~i~tldG~~l~i~ 179 (233)
|-.+..+-+....|. ...|..++|.+.+|+.+.++
T Consensus 5 WvpD~~egfv~g~I~---~~~g~~vtV~~~~G~~~tv~ 39 (42)
T PF02736_consen 5 WVPDPKEGFVKGEII---EEEGDKVTVKTEDGKEVTVK 39 (42)
T ss_dssp EEEESSSSEEEEEEE---EEESSEEEEEETTTEEEEEE
T ss_pred EEeCCcccEEEEEEE---EEcCCEEEEEECCCCEEEeC
Confidence 334445555555554 56788999999999765554
No 97
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=26.82 E-value=23 Score=38.68 Aligned_cols=39 Identities=10% Similarity=0.223 Sum_probs=25.5
Q ss_pred CCCCcccEEEEEE-eCCceEEEeeeccCccCCCceEEEEeEEEEEEe
Q 026801 58 RRCNCRNEVYHKQ-IGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 103 (233)
Q Consensus 58 ~~C~G~G~~~~~~-~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 103 (233)
+.|.|.|.+...+ .-+ -....|+.|+|+++..+. ++|+.
T Consensus 1611 ~~C~G~G~i~i~m~fl~-----dv~~~C~~C~G~R~~~e~--L~v~~ 1650 (1809)
T PRK00635 1611 SDCWGLGYQWIDRAFYA-----LEKRPCPTCSGFRIQPLA--QEVVY 1650 (1809)
T ss_pred CCCccCceEEEecccCC-----CcccCCCCCCCcCCCHHH--Hhhee
Confidence 4899999876553 111 115689999999887653 44433
No 98
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=25.12 E-value=61 Score=18.51 Aligned_cols=13 Identities=15% Similarity=0.478 Sum_probs=7.9
Q ss_pred ccCccCCCceEEE
Q 026801 82 QVCDQCQNVKYER 94 (233)
Q Consensus 82 ~~C~~C~G~g~~~ 94 (233)
..|+.|++.+.+.
T Consensus 4 ~~C~~C~~~~i~~ 16 (33)
T PF08792_consen 4 KKCSKCGGNGIVN 16 (33)
T ss_pred eEcCCCCCCeEEE
Confidence 3566666666553
No 99
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=23.85 E-value=1.2e+02 Score=22.62 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=27.8
Q ss_pred EEeCCCCCCCcEEEECCCCcCCCCC------CCCccEEEEEEEECCC
Q 026801 178 ISTKGITKPKEVRKFGGEGMPLHFS------NKKGDLYITFEVLFPT 218 (233)
Q Consensus 178 i~i~~~~~~g~~~~i~g~G~p~~~~------~~~GdL~v~~~v~~P~ 218 (233)
..+|....+|+.+.|.|.=.+..+. ...+|+.++|++.+++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 3567778888888888764433221 1226999999999886
No 100
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=23.73 E-value=91 Score=20.33 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=17.5
Q ss_pred EEEEECCCCCCHHHHHHHHHhh
Q 026801 211 TFEVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 211 ~~~v~~P~~l~~~~~~~l~~~~ 232 (233)
.-...||+.|++.++..+-++.
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a 37 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLC 37 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHH
Confidence 3457799999999999887653
No 101
>TIGR00757 RNaseEG ribonuclease, Rne/Rng family. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome.
Probab=23.31 E-value=58 Score=29.96 Aligned_cols=16 Identities=19% Similarity=0.542 Sum_probs=13.8
Q ss_pred eccCccCCCceEEEEe
Q 026801 81 EQVCDQCQNVKYEREG 96 (233)
Q Consensus 81 ~~~C~~C~G~g~~~~~ 96 (233)
...|+.|+|.|.+...
T Consensus 390 ~~~Cp~C~G~G~v~s~ 405 (414)
T TIGR00757 390 GTVCPHCSGTGIVKTS 405 (414)
T ss_pred cCCCCCCcCeeEEccH
Confidence 7899999999988654
No 102
>PF09285 Elong-fact-P_C: Elongation factor P, C-terminal; InterPro: IPR015365 These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology []. ; GO: 0043043 peptide biosynthetic process, 0005737 cytoplasm; PDB: 1YBY_A 3OYY_B 1UEB_B 3HUW_V 3HUY_V 3A5Z_H.
Probab=22.35 E-value=1.7e+02 Score=18.94 Aligned_cols=28 Identities=11% Similarity=-0.032 Sum_probs=16.3
Q ss_pred EEEEEcCCCcEEEEEeCCCCCCCcEEEECC
Q 026801 165 EKTIEHLDEHLVDISTKGITKPKEVRKFGG 194 (233)
Q Consensus 165 ~~~i~tldG~~l~i~i~~~~~~g~~~~i~g 194 (233)
......-.| +.|.+|.-++.|+.+++.-
T Consensus 21 ~K~A~letG--~~i~VP~FI~~Gd~I~VdT 48 (56)
T PF09285_consen 21 YKPATLETG--AEIQVPLFIEEGDKIKVDT 48 (56)
T ss_dssp EEEEEETTS---EEEEETT--TT-EEEEET
T ss_pred ccEEEEcCC--CEEEccceecCCCEEEEEC
Confidence 344444445 6788999999999988853
No 103
>PF00900 Ribosomal_S4e: Ribosomal family S4e; InterPro: IPR013845 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic and archaeal ribosomal proteins can be grouped on the basis of sequence similarities. One of these families includes yeast S7 (YS6); archaeal S4e; and mammalian and plant cytoplasmic S4 []. Two highly similar isoforms of mammalian S4 exist, one coded by a gene on chromosome Y, and the other on chromosome X. These proteins have 233 to 264 amino acids. This entry represents the central region of these proteins.; PDB: 2XZM_W 2XZN_W 3IZ6_D 3KBG_A 3U5G_E 3U5C_E 3IZB_D.
Probab=21.34 E-value=2.8e+02 Score=19.01 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=20.6
Q ss_pred ccCCEEEEEcCCCcEEEEEeC-CCCCCCcEEEEC
Q 026801 161 LVGFEKTIEHLDEHLVDISTK-GITKPKEVRKFG 193 (233)
Q Consensus 161 l~G~~~~i~tldG~~l~i~i~-~~~~~g~~~~i~ 193 (233)
..|+...+.+-||+. +..| +.++.++.+.+.
T Consensus 39 ~~gG~~ql~~hDGrn--i~~~~~~~k~~Dtv~i~ 70 (77)
T PF00900_consen 39 GKGGKPQLNTHDGRN--IRYPDPDIKTNDTVVID 70 (77)
T ss_dssp EGGGEEEEEETTTEE--EES-SST--TTEEEEEE
T ss_pred ecCCcEEEEecCceE--EEcCcCCccCCCEEEEE
Confidence 468888999999985 4455 566777777663
No 104
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=20.92 E-value=82 Score=27.22 Aligned_cols=30 Identities=30% Similarity=0.428 Sum_probs=22.5
Q ss_pred EEEEECHhhhccC-CEEEEEcCCCcEEEEEe
Q 026801 151 TTVTVTLVQALVG-FEKTIEHLDEHLVDIST 180 (233)
Q Consensus 151 ~~~~i~l~~al~G-~~~~i~tldG~~l~i~i 180 (233)
+...|-||||+.| +..+|++.|+..=.+.|
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLei 48 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEI 48 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEE
Confidence 3457889999999 67899999986334443
No 105
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=20.25 E-value=1.1e+02 Score=19.94 Aligned_cols=20 Identities=30% Similarity=0.566 Sum_probs=16.8
Q ss_pred EEECCCCCCHHHHHHHHHhh
Q 026801 213 EVLFPTTLTEDQKTRIKEVL 232 (233)
Q Consensus 213 ~v~~P~~l~~~~~~~l~~~~ 232 (233)
.+.||..|++.|+..+-++.
T Consensus 19 ~l~F~p~ls~~eR~~vH~lA 38 (60)
T cd02641 19 ELEFPPTLSSHDRLLVHELA 38 (60)
T ss_pred cEECCCCCCHHHHHHHHHHH
Confidence 57799999999999887764
No 106
>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site. Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].
Probab=20.09 E-value=1e+02 Score=25.19 Aligned_cols=20 Identities=30% Similarity=0.494 Sum_probs=16.2
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q 026801 211 TFEVLFPTTLTEDQKTRIKE 230 (233)
Q Consensus 211 ~~~v~~P~~l~~~~~~~l~~ 230 (233)
.|.|.||..++.++|.+|-.
T Consensus 190 ~f~i~Fp~~l~~~~Kalll~ 209 (221)
T PF03803_consen 190 NFVIEFPPDLDVEQKALLLG 209 (221)
T ss_pred eEEEEcCCCCCHHHHHHHHH
Confidence 45677899999999998754
Done!