Query 026807
Match_columns 233
No_of_seqs 16 out of 18
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 22:39:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3upv_A Heat shock protein STI1 95.1 0.089 3E-06 35.4 6.9 27 2-28 18-44 (126)
2 3vtx_A MAMA; tetratricopeptide 94.9 0.081 2.8E-06 37.5 6.6 29 2-30 19-47 (184)
3 3rkv_A Putative peptidylprolyl 94.8 0.1 3.6E-06 36.9 6.9 24 2-25 77-100 (162)
4 3ma5_A Tetratricopeptide repea 94.8 0.12 4E-06 34.8 6.8 27 1-27 20-46 (100)
5 1hxi_A PEX5, peroxisome target 94.6 0.16 5.5E-06 35.5 7.4 31 1-31 30-60 (121)
6 2dba_A Smooth muscle cell asso 94.5 0.26 8.9E-06 32.7 7.8 39 2-40 42-80 (148)
7 4g1t_A Interferon-induced prot 94.3 0.044 1.5E-06 44.3 4.5 29 2-30 152-180 (472)
8 2fbn_A 70 kDa peptidylprolyl i 94.3 0.052 1.8E-06 39.7 4.5 29 1-29 101-129 (198)
9 3q49_B STIP1 homology and U bo 94.2 0.33 1.1E-05 32.4 7.9 30 1-30 22-51 (137)
10 1elr_A TPR2A-domain of HOP; HO 94.1 0.67 2.3E-05 29.6 9.1 28 2-29 18-45 (131)
11 2vyi_A SGTA protein; chaperone 94.1 0.36 1.2E-05 30.8 7.6 31 1-31 25-55 (131)
12 3k9i_A BH0479 protein; putativ 94.1 0.11 3.8E-06 35.2 5.5 23 2-24 41-63 (117)
13 2kck_A TPR repeat; tetratricop 94.0 0.18 6.1E-06 31.6 6.0 27 1-27 19-45 (112)
14 1elw_A TPR1-domain of HOP; HOP 93.9 0.44 1.5E-05 29.9 7.6 30 2-31 18-47 (118)
15 4gco_A Protein STI-1; structur 93.8 0.31 1.1E-05 34.3 7.6 27 2-28 27-53 (126)
16 3upv_A Heat shock protein STI1 93.8 0.42 1.4E-05 32.0 7.9 27 1-27 51-77 (126)
17 1hxi_A PEX5, peroxisome target 93.8 0.2 6.9E-06 35.0 6.5 26 1-26 64-89 (121)
18 1a17_A Serine/threonine protei 93.8 0.26 8.8E-06 33.4 6.8 29 1-29 60-88 (166)
19 3sz7_A HSC70 cochaperone (SGT) 93.7 0.26 8.9E-06 34.8 7.1 27 2-28 25-51 (164)
20 2kc7_A BFR218_protein; tetratr 93.5 0.083 2.8E-06 34.1 3.9 30 2-31 14-44 (99)
21 3q49_B STIP1 homology and U bo 93.4 0.56 1.9E-05 31.2 8.0 31 1-31 56-86 (137)
22 1p5q_A FKBP52, FK506-binding p 93.4 0.23 8E-06 40.7 7.3 25 2-26 210-234 (336)
23 2lni_A Stress-induced-phosphop 93.4 0.33 1.1E-05 31.5 6.7 30 2-31 30-59 (133)
24 2l6j_A TPR repeat-containing p 93.3 0.15 5.1E-06 32.7 4.8 26 1-26 17-42 (111)
25 1na3_A Designed protein CTPR2; 93.3 0.16 5.5E-06 31.5 4.8 27 1-27 22-48 (91)
26 2kat_A Uncharacterized protein 93.2 0.72 2.5E-05 30.6 8.3 26 1-26 32-57 (115)
27 3sz7_A HSC70 cochaperone (SGT) 93.2 0.5 1.7E-05 33.3 7.9 27 1-27 58-84 (164)
28 3vtx_A MAMA; tetratricopeptide 93.1 0.14 4.8E-06 36.2 4.8 27 2-28 87-113 (184)
29 4gcn_A Protein STI-1; structur 93.0 0.77 2.6E-05 32.1 8.5 25 2-26 22-46 (127)
30 1na3_A Designed protein CTPR2; 93.0 0.16 5.4E-06 31.5 4.4 28 1-28 56-83 (91)
31 1na0_A Designed protein CTPR3; 92.8 0.8 2.7E-05 28.9 7.6 26 2-27 23-48 (125)
32 4gco_A Protein STI-1; structur 92.7 0.35 1.2E-05 34.1 6.5 25 1-25 60-84 (126)
33 2dba_A Smooth muscle cell asso 92.6 0.52 1.8E-05 31.2 6.9 27 1-27 78-104 (148)
34 2kck_A TPR repeat; tetratricop 92.4 0.11 3.6E-06 32.7 3.1 28 1-28 53-82 (112)
35 2fbn_A 70 kDa peptidylprolyl i 92.4 0.76 2.6E-05 33.4 8.1 39 2-40 136-174 (198)
36 3gyz_A Chaperone protein IPGC; 92.3 0.39 1.3E-05 35.9 6.6 25 2-26 50-74 (151)
37 1kt0_A FKBP51, 51 kDa FK506-bi 92.3 0.15 5.2E-06 43.9 4.8 25 1-25 330-354 (457)
38 3k9i_A BH0479 protein; putativ 92.2 0.35 1.2E-05 32.7 5.7 41 1-41 3-43 (117)
39 2xcb_A PCRH, regulatory protei 92.1 0.22 7.5E-06 34.8 4.7 29 2-30 32-60 (142)
40 2xcb_A PCRH, regulatory protei 92.1 0.74 2.5E-05 32.1 7.4 28 1-28 65-92 (142)
41 2vgx_A Chaperone SYCD; alterna 92.1 0.5 1.7E-05 34.1 6.8 26 2-27 35-60 (148)
42 2pl2_A Hypothetical conserved 92.0 1.3 4.4E-05 33.3 9.2 26 2-27 19-44 (217)
43 4ga2_A E3 SUMO-protein ligase 92.0 0.22 7.7E-06 35.7 4.8 28 1-28 44-71 (150)
44 2pl2_A Hypothetical conserved 91.9 0.7 2.4E-05 34.8 7.6 27 2-28 98-124 (217)
45 1ihg_A Cyclophilin 40; ppiase 91.9 0.39 1.3E-05 40.7 6.8 27 1-27 286-312 (370)
46 1p5q_A FKBP52, FK506-binding p 91.8 0.92 3.2E-05 37.2 8.8 41 1-41 243-283 (336)
47 2v5f_A Prolyl 4-hydroxylase su 91.7 0.38 1.3E-05 33.3 5.5 34 1-34 59-92 (104)
48 2l6j_A TPR repeat-containing p 91.5 0.25 8.7E-06 31.6 4.2 21 1-21 51-71 (111)
49 2kc7_A BFR218_protein; tetratr 91.5 0.31 1.1E-05 31.3 4.6 24 2-25 49-72 (99)
50 3uq3_A Heat shock protein STI1 91.4 1.1 3.9E-05 32.0 7.9 29 2-30 153-181 (258)
51 4ga2_A E3 SUMO-protein ligase 91.2 0.26 8.9E-06 35.4 4.4 30 1-30 78-107 (150)
52 4gcn_A Protein STI-1; structur 91.2 0.21 7E-06 35.1 3.8 23 1-23 55-77 (127)
53 2e2e_A Formate-dependent nitri 91.2 0.92 3.1E-05 32.0 7.2 28 2-29 58-85 (177)
54 1elr_A TPR2A-domain of HOP; HO 91.1 0.39 1.3E-05 30.7 4.8 20 2-21 52-71 (131)
55 2c2l_A CHIP, carboxy terminus 91.1 1.7 5.9E-05 34.4 9.5 23 2-24 52-74 (281)
56 2xev_A YBGF; tetratricopeptide 91.1 1.4 4.9E-05 28.8 7.7 34 2-35 16-49 (129)
57 1zu2_A Mitochondrial import re 91.1 0.22 7.6E-06 39.9 4.3 23 2-24 105-127 (158)
58 3as5_A MAMA; tetratricopeptide 91.1 1.7 5.9E-05 29.2 8.2 26 2-27 56-81 (186)
59 3uq3_A Heat shock protein STI1 91.0 0.94 3.2E-05 32.5 7.1 29 1-29 186-214 (258)
60 1na0_A Designed protein CTPR3; 90.9 1.4 4.6E-05 27.8 7.1 28 1-28 56-83 (125)
61 2fo7_A Synthetic consensus TPR 90.9 2 6.7E-05 27.0 8.3 26 2-27 15-40 (136)
62 4i17_A Hypothetical protein; T 90.8 1.3 4.3E-05 32.5 7.8 24 2-25 56-79 (228)
63 3urz_A Uncharacterized protein 90.7 0.45 1.6E-05 35.6 5.5 29 1-29 67-95 (208)
64 2vq2_A PILW, putative fimbrial 90.5 1.2 4E-05 31.2 7.2 30 2-31 22-51 (225)
65 1elw_A TPR1-domain of HOP; HOP 90.5 0.67 2.3E-05 29.1 5.4 27 2-28 52-78 (118)
66 2fo7_A Synthetic consensus TPR 90.5 2 6.8E-05 27.0 7.6 27 2-28 49-75 (136)
67 3as5_A MAMA; tetratricopeptide 90.4 1.4 4.9E-05 29.6 7.2 29 2-30 90-118 (186)
68 3gyz_A Chaperone protein IPGC; 90.3 0.81 2.8E-05 34.2 6.6 28 1-28 83-110 (151)
69 1xnf_A Lipoprotein NLPI; TPR, 90.2 1.2 4E-05 32.6 7.2 26 2-27 57-82 (275)
70 2vgx_A Chaperone SYCD; alterna 90.2 1.4 4.7E-05 31.7 7.5 28 1-28 68-95 (148)
71 2q7f_A YRRB protein; TPR, prot 90.1 1.4 4.8E-05 31.5 7.4 28 2-29 71-98 (243)
72 2lni_A Stress-induced-phosphop 89.9 2.1 7.1E-05 27.6 7.5 27 1-27 63-89 (133)
73 1a17_A Serine/threonine protei 89.9 1.9 6.6E-05 29.0 7.6 29 1-29 26-54 (166)
74 4eqf_A PEX5-related protein; a 89.8 0.98 3.3E-05 35.2 6.8 25 2-26 227-251 (365)
75 2hr2_A Hypothetical protein; a 89.7 0.52 1.8E-05 37.7 5.3 24 1-24 70-100 (159)
76 2xev_A YBGF; tetratricopeptide 89.7 1.5 5.3E-05 28.7 6.9 23 1-23 52-74 (129)
77 4i17_A Hypothetical protein; T 89.2 1.9 6.6E-05 31.5 7.7 26 2-27 21-47 (228)
78 3ieg_A DNAJ homolog subfamily 89.2 1.2 4.1E-05 33.4 6.7 24 2-25 248-271 (359)
79 3hym_B Cell division cycle pro 89.2 0.88 3E-05 33.9 5.9 42 1-42 249-290 (330)
80 2q7f_A YRRB protein; TPR, prot 89.1 1.7 5.8E-05 31.1 7.2 28 1-28 104-131 (243)
81 2vsy_A XCC0866; transferase, g 89.0 1.4 4.8E-05 37.8 7.8 26 2-27 71-96 (568)
82 3urz_A Uncharacterized protein 88.7 1 3.6E-05 33.6 6.1 30 2-31 102-131 (208)
83 2if4_A ATFKBP42; FKBP-like, al 88.6 0.13 4.3E-06 42.5 1.1 28 1-28 243-270 (338)
84 2vq2_A PILW, putative fimbrial 88.5 4.8 0.00016 28.1 9.3 27 2-28 127-153 (225)
85 1zu2_A Mitochondrial import re 88.4 3.3 0.00011 33.1 9.2 27 2-28 16-42 (158)
86 3hym_B Cell division cycle pro 88.0 2.1 7.1E-05 31.9 7.3 22 3-24 140-161 (330)
87 1fch_A Peroxisomal targeting s 87.6 2.9 9.9E-05 32.0 8.0 22 3-24 232-253 (368)
88 3edt_B KLC 2, kinesin light ch 87.6 1.2 4.2E-05 32.1 5.6 39 1-39 56-99 (283)
89 3cv0_A Peroxisome targeting si 87.5 3.1 0.00011 30.9 7.9 22 3-24 153-174 (327)
90 2ho1_A Type 4 fimbrial biogene 87.5 2.2 7.4E-05 31.1 7.0 23 3-25 156-178 (252)
91 2yhc_A BAMD, UPF0169 lipoprote 87.3 1 3.5E-05 33.8 5.3 34 2-35 110-143 (225)
92 2vyi_A SGTA protein; chaperone 87.3 1.2 4.2E-05 28.2 4.9 26 1-26 59-84 (131)
93 1hh8_A P67PHOX, NCF-2, neutrop 87.1 1.8 6.3E-05 30.9 6.3 28 1-28 50-77 (213)
94 4eqf_A PEX5-related protein; a 87.0 2 7E-05 33.4 7.0 28 1-28 190-219 (365)
95 2y4t_A DNAJ homolog subfamily 86.9 0.96 3.3E-05 35.9 5.2 27 2-28 309-335 (450)
96 3cv0_A Peroxisome targeting si 86.9 3.1 0.00011 30.9 7.6 28 2-29 35-62 (327)
97 2if4_A ATFKBP42; FKBP-like, al 86.9 0.42 1.4E-05 39.4 3.2 34 1-34 277-310 (338)
98 3bee_A Putative YFRE protein; 86.8 0.67 2.3E-05 32.6 3.8 18 3-20 58-75 (93)
99 2c2l_A CHIP, carboxy terminus 86.5 0.64 2.2E-05 36.9 4.0 21 1-21 85-105 (281)
100 1kt0_A FKBP51, 51 kDa FK506-bi 86.5 1.5 5E-05 37.8 6.5 40 1-40 364-403 (457)
101 1qqe_A Vesicular transport pro 86.1 2.4 8.2E-05 33.3 7.0 17 85-101 256-272 (292)
102 2ho1_A Type 4 fimbrial biogene 86.0 3.9 0.00013 29.7 7.7 25 2-26 85-109 (252)
103 4g1t_A Interferon-induced prot 86.0 1.2 4.2E-05 35.8 5.4 23 2-24 348-370 (472)
104 4abn_A Tetratricopeptide repea 86.0 1.5 5.3E-05 37.6 6.3 25 2-26 235-262 (474)
105 4gyw_A UDP-N-acetylglucosamine 85.8 2.1 7.1E-05 40.5 7.6 22 3-24 58-79 (723)
106 4gyw_A UDP-N-acetylglucosamine 85.6 2.8 9.4E-05 39.7 8.4 27 1-27 90-116 (723)
107 1fch_A Peroxisomal targeting s 85.4 3.7 0.00013 31.4 7.6 28 2-29 78-105 (368)
108 3edt_B KLC 2, kinesin light ch 85.2 6.6 0.00022 28.2 8.4 38 1-38 98-140 (283)
109 2yhc_A BAMD, UPF0169 lipoprote 84.8 1.5 5E-05 32.9 5.0 35 2-36 161-195 (225)
110 2vsy_A XCC0866; transferase, g 84.7 2.2 7.7E-05 36.6 6.7 28 2-29 37-64 (568)
111 3nf1_A KLC 1, kinesin light ch 84.4 7 0.00024 28.8 8.4 40 1-40 124-168 (311)
112 3qky_A Outer membrane assembly 83.9 6.1 0.00021 29.7 8.1 34 1-34 161-194 (261)
113 2r5s_A Uncharacterized protein 83.9 1.6 5.5E-05 31.3 4.7 26 2-27 20-45 (176)
114 3qky_A Outer membrane assembly 83.8 8 0.00027 29.0 8.7 31 1-31 110-140 (261)
115 3ieg_A DNAJ homolog subfamily 83.6 12 0.0004 27.9 10.3 27 2-28 168-194 (359)
116 4abn_A Tetratricopeptide repea 83.5 7.6 0.00026 33.3 9.5 28 2-29 193-220 (474)
117 3nf1_A KLC 1, kinesin light ch 83.3 2.4 8.3E-05 31.2 5.5 38 1-38 82-124 (311)
118 1wao_1 Serine/threonine protei 83.2 3.3 0.00011 36.1 7.3 26 2-27 20-45 (477)
119 3ro2_A PINS homolog, G-protein 83.0 11 0.00039 27.4 10.0 23 2-24 19-41 (338)
120 2e2e_A Formate-dependent nitri 82.9 3.1 0.00011 29.2 5.8 27 2-28 93-121 (177)
121 3u4t_A TPR repeat-containing p 82.5 1.9 6.4E-05 31.7 4.7 29 2-30 88-116 (272)
122 1xnf_A Lipoprotein NLPI; TPR, 82.3 2 6.8E-05 31.3 4.7 27 2-28 91-117 (275)
123 1wao_1 Serine/threonine protei 82.3 1.2 4.1E-05 38.8 4.2 33 2-34 88-120 (477)
124 2ond_A Cleavage stimulation fa 82.1 6.7 0.00023 30.7 8.0 22 3-24 149-170 (308)
125 1w3b_A UDP-N-acetylglucosamine 82.0 2.3 7.8E-05 33.5 5.3 25 2-26 251-275 (388)
126 3qou_A Protein YBBN; thioredox 81.0 2.2 7.7E-05 33.7 5.0 29 2-30 131-159 (287)
127 2ooe_A Cleavage stimulation fa 80.9 6.4 0.00022 33.3 8.0 25 3-27 406-430 (530)
128 2y4t_A DNAJ homolog subfamily 80.7 19 0.00066 28.4 11.1 30 2-31 225-254 (450)
129 1hh8_A P67PHOX, NCF-2, neutrop 80.6 2.2 7.6E-05 30.4 4.4 22 1-22 84-105 (213)
130 2kat_A Uncharacterized protein 79.9 6 0.0002 26.0 6.1 26 5-30 2-27 (115)
131 3mkr_A Coatomer subunit epsilo 79.6 1.3 4.5E-05 35.5 3.2 26 1-26 213-238 (291)
132 1pc2_A Mitochondria fission pr 79.3 3 0.0001 33.4 5.3 27 1-27 84-110 (152)
133 2hr2_A Hypothetical protein; a 79.3 1.9 6.6E-05 34.4 4.1 20 2-21 25-44 (159)
134 4a1s_A PINS, partner of inscut 78.7 22 0.00074 27.8 10.0 22 2-23 62-83 (411)
135 3q15_A PSP28, response regulat 78.6 5.4 0.00019 31.9 6.5 16 3-18 276-291 (378)
136 1w3b_A UDP-N-acetylglucosamine 78.2 8.9 0.0003 30.1 7.5 30 2-31 13-42 (388)
137 3fp2_A TPR repeat-containing p 78.2 5.6 0.00019 32.2 6.5 27 2-28 290-316 (537)
138 3fp2_A TPR repeat-containing p 77.9 7.2 0.00024 31.6 7.0 31 1-31 323-353 (537)
139 2r5s_A Uncharacterized protein 77.2 1 3.5E-05 32.3 1.8 25 1-26 53-77 (176)
140 4b4t_Q 26S proteasome regulato 76.9 23 0.0008 28.0 9.7 22 2-23 18-39 (434)
141 3gw4_A Uncharacterized protein 76.7 16 0.00055 25.3 8.8 38 1-38 79-120 (203)
142 2gw1_A Mitochondrial precursor 76.6 11 0.00038 30.1 7.7 23 1-24 19-41 (514)
143 3ma5_A Tetratricopeptide repea 75.9 1.4 4.6E-05 29.5 2.0 21 1-21 54-74 (100)
144 2h6f_A Protein farnesyltransfe 75.4 5.5 0.00019 34.1 6.1 24 2-25 111-134 (382)
145 3u4t_A TPR repeat-containing p 75.3 21 0.00073 26.0 9.8 22 3-24 157-178 (272)
146 2h6f_A Protein farnesyltransfe 74.7 7.2 0.00025 33.4 6.6 23 4-26 148-170 (382)
147 3mkr_A Coatomer subunit epsilo 74.5 14 0.00048 29.5 7.9 22 1-22 143-164 (291)
148 3qou_A Protein YBBN; thioredox 74.5 4.6 0.00016 31.9 5.0 22 1-22 164-185 (287)
149 3ro2_A PINS homolog, G-protein 73.9 23 0.00078 25.8 8.2 19 2-20 97-115 (338)
150 3sf4_A G-protein-signaling mod 73.3 29 0.00098 26.6 10.0 23 2-24 23-45 (406)
151 2ifu_A Gamma-SNAP; membrane fu 72.6 6.7 0.00023 31.0 5.5 18 1-18 168-185 (307)
152 3ulq_A Response regulator aspa 72.4 8 0.00027 30.8 5.9 16 1-16 237-252 (383)
153 2ond_A Cleavage stimulation fa 71.4 4.2 0.00014 31.9 4.1 25 3-27 79-104 (308)
154 4a1s_A PINS, partner of inscut 71.1 6.7 0.00023 30.7 5.1 36 1-36 276-314 (411)
155 2gw1_A Mitochondrial precursor 69.9 9 0.00031 30.6 5.7 27 2-28 318-344 (514)
156 3rkv_A Putative peptidylprolyl 69.6 18 0.0006 25.2 6.6 16 2-17 25-40 (162)
157 3sf4_A G-protein-signaling mod 68.9 28 0.00096 26.6 8.1 21 1-21 100-120 (406)
158 2xpi_A Anaphase-promoting comp 68.4 17 0.0006 30.0 7.3 24 2-25 387-410 (597)
159 2pzi_A Probable serine/threoni 66.9 5.6 0.00019 36.1 4.4 27 2-28 447-473 (681)
160 2xpi_A Anaphase-promoting comp 65.6 22 0.00077 29.4 7.4 27 2-28 353-379 (597)
161 1x9f_D Globin C, hemoglobin ch 63.7 22 0.00074 26.2 6.4 17 7-23 28-44 (140)
162 3qww_A SET and MYND domain-con 63.1 8.6 0.0003 34.2 4.8 47 1-47 353-404 (433)
163 3ro3_A PINS homolog, G-protein 62.3 28 0.00097 22.3 8.7 21 2-22 23-43 (164)
164 1qqe_A Vesicular transport pro 60.0 32 0.0011 26.8 7.1 18 2-19 51-68 (292)
165 3ulq_A Response regulator aspa 59.4 64 0.0022 25.5 9.7 36 2-37 117-155 (383)
166 2ooe_A Cleavage stimulation fa 59.2 34 0.0012 28.9 7.6 28 2-29 26-53 (530)
167 2ifu_A Gamma-SNAP; membrane fu 56.9 53 0.0018 25.8 7.9 18 2-19 90-107 (307)
168 3bee_A Putative YFRE protein; 56.4 17 0.00056 25.3 4.4 27 4-30 25-51 (93)
169 3s6n_M SurviVal motor neuron p 54.5 7.2 0.00025 26.0 2.1 17 2-18 16-32 (37)
170 1x9f_B Erythrocruorin, globin 53.2 26 0.0009 25.9 5.4 17 7-23 30-46 (145)
171 2cpt_A SKD1 protein, vacuolar 52.9 44 0.0015 25.5 6.7 27 3-29 33-66 (117)
172 2v5f_A Prolyl 4-hydroxylase su 51.7 53 0.0018 22.2 6.5 18 1-18 18-35 (104)
173 1b0b_A Hemoglobin; hemoprotein 51.1 59 0.002 23.8 6.9 27 62-88 115-141 (142)
174 3gw4_A Uncharacterized protein 50.7 59 0.002 22.4 7.1 17 2-18 121-137 (203)
175 2pzi_A Probable serine/threoni 50.6 51 0.0017 29.9 7.7 28 2-29 405-440 (681)
176 1oks_A RNA polymerase alpha su 50.4 11 0.00037 27.1 2.7 41 20-62 2-42 (56)
177 3mkr_B Coatomer subunit alpha; 50.2 45 0.0015 30.0 7.2 47 2-48 116-166 (320)
178 1jf3_A Monomer hemoglobin comp 49.9 51 0.0017 24.1 6.4 18 72-89 128-145 (147)
179 3qwp_A SET and MYND domain-con 49.1 16 0.00055 32.1 4.1 45 2-46 343-392 (429)
180 1x9f_C Erythrocruorin, globin 48.9 28 0.00096 26.1 5.0 18 72-89 134-151 (153)
181 3b5n_C Protein transport prote 48.7 54 0.0019 23.4 6.2 56 5-62 8-68 (70)
182 2dc3_A Cytoglobin; myoglobin, 47.7 76 0.0026 25.0 7.5 64 22-89 103-169 (193)
183 1yhu_D Hemoglobin B2 chain; gl 47.3 19 0.00065 26.9 3.8 18 72-89 130-147 (149)
184 2zs0_B Extracellular giant hem 47.0 39 0.0013 24.9 5.4 14 72-85 127-140 (142)
185 3n71_A Histone lysine methyltr 46.4 23 0.00079 32.0 4.8 44 1-44 364-412 (490)
186 3ro3_A PINS homolog, G-protein 46.2 56 0.0019 20.9 10.0 21 1-21 62-82 (164)
187 3mkq_A Coatomer beta'-subunit; 45.3 54 0.0019 28.4 6.7 14 59-72 766-779 (814)
188 2qfc_A PLCR protein; TPR, HTH, 45.3 1E+02 0.0035 23.7 9.6 25 1-25 168-195 (293)
189 3mv2_A Coatomer subunit alpha; 44.8 37 0.0013 30.7 5.8 47 2-48 128-178 (325)
190 1mba_A Myoglobin; oxygen stora 44.3 78 0.0027 23.1 6.7 17 72-88 129-145 (147)
191 2zs0_A Extracellular giant hem 44.2 30 0.001 25.6 4.4 18 7-24 28-45 (140)
192 3n71_A Histone lysine methyltr 44.0 43 0.0015 30.2 6.2 46 2-47 407-457 (490)
193 3u3w_A Transcriptional activat 43.1 20 0.00067 27.8 3.4 21 1-21 209-229 (293)
194 4a5x_A MITD1, MIT domain-conta 42.9 79 0.0027 22.8 6.4 14 3-16 31-44 (86)
195 1ihg_A Cyclophilin 40; ppiase 42.3 37 0.0013 28.6 5.2 19 2-20 237-255 (370)
196 2zs0_C Extracellular giant hem 42.0 32 0.0011 25.6 4.3 16 72-87 130-145 (147)
197 3hme_A Bromodomain-containing 42.0 59 0.002 24.2 5.8 45 5-49 76-120 (123)
198 3q15_A PSP28, response regulat 41.8 1.3E+02 0.0044 23.9 8.4 19 2-20 155-173 (378)
199 3qww_A SET and MYND domain-con 41.4 1.6E+02 0.0053 26.1 9.3 85 3-88 313-415 (433)
200 1yhu_C Hemoglobin B1A chain; g 40.8 22 0.00074 26.6 3.2 18 7-24 33-50 (148)
201 1x46_A Globin chain, hemoglobi 40.6 62 0.0021 23.9 5.7 18 71-88 132-149 (150)
202 1yhu_A Hemoglobin A1 chain; gl 40.4 50 0.0017 24.7 5.2 15 72-86 126-140 (145)
203 3rjs_A Dynein light chain moto 40.2 31 0.0011 25.0 3.9 12 59-70 41-52 (89)
204 2crb_A Nuclear receptor bindin 40.1 41 0.0014 26.2 4.7 15 3-17 30-44 (97)
205 2v6y_A AAA family ATPase, P60 38.7 16 0.00056 26.1 2.1 16 4-19 34-49 (83)
206 4ds1_A Dynein light chain 1, c 38.3 33 0.0011 25.5 3.8 12 59-70 49-60 (97)
207 4a5x_A MITD1, MIT domain-conta 38.1 17 0.00057 26.4 2.1 21 2-22 37-57 (86)
208 2zs0_D Extracellular giant hem 37.8 48 0.0016 25.1 4.8 17 70-86 126-142 (145)
209 1x9f_A Globin IV, extracellula 37.6 40 0.0014 25.3 4.3 17 72-88 133-149 (151)
210 2w2u_A Hypothetical P60 katani 37.2 18 0.0006 26.2 2.1 16 4-19 42-57 (83)
211 1q1f_A Neuroglobin; globin fol 36.9 72 0.0024 23.1 5.4 61 23-89 84-148 (151)
212 2w72_B Human hemoglobin A; iro 36.5 82 0.0028 23.3 5.8 59 24-87 81-143 (146)
213 3dra_A Protein farnesyltransfe 36.3 20 0.00069 30.3 2.7 22 3-24 48-69 (306)
214 4f3v_A ESX-1 secretion system 36.2 31 0.0011 29.6 3.8 18 1-18 184-201 (282)
215 3dra_A Protein farnesyltransfe 36.2 20 0.00068 30.4 2.6 24 3-26 84-107 (306)
216 1yhu_B Giant hemoglobins B cha 35.9 55 0.0019 23.9 4.7 17 7-23 30-46 (144)
217 3ubc_A Hemoglobin-like flavopr 35.3 72 0.0024 22.9 5.2 17 7-23 24-40 (131)
218 2nrk_A Hypothetical protein GR 35.1 43 0.0015 26.8 4.3 46 45-90 122-169 (173)
219 2cpt_A SKD1 protein, vacuolar 35.0 19 0.00066 27.5 2.1 13 4-16 15-27 (117)
220 2lxl_A Vacuolar protein sortin 34.8 52 0.0018 27.0 4.8 55 9-63 41-96 (183)
221 1ouv_A Conserved hypothetical 33.7 1.4E+02 0.0049 22.0 7.8 16 3-18 57-72 (273)
222 1wfd_A Hypothetical protein 15 32.6 23 0.00079 25.8 2.1 19 4-22 38-56 (93)
223 3u8p_A Cytochrome B562 integra 31.4 1.9E+02 0.0067 26.7 8.4 70 2-72 67-154 (347)
224 3pt8_A Hemoglobin II; oxygen c 31.3 1.6E+02 0.0053 21.7 7.3 77 8-91 71-150 (152)
225 3u3w_A Transcriptional activat 31.1 30 0.001 26.7 2.7 20 3-22 130-149 (293)
226 1wfd_A Hypothetical protein 15 31.0 1.5E+02 0.0051 21.4 6.7 16 2-17 29-44 (93)
227 2c0k_A Hemoglobin; oxygen tran 31.0 1.3E+02 0.0045 22.3 6.2 63 20-89 82-147 (151)
228 1ouv_A Conserved hypothetical 30.8 1.6E+02 0.0056 21.7 7.9 17 2-18 128-144 (273)
229 1yo3_A Dynein light chain 1; s 30.7 51 0.0017 24.7 3.8 16 52-70 50-65 (102)
230 1dce_A Protein (RAB geranylger 30.6 27 0.00094 31.6 2.7 28 2-29 206-233 (567)
231 1a6m_A Myoglobin; heme protein 30.6 51 0.0018 24.7 3.8 19 71-89 128-146 (151)
232 4b4t_Q 26S proteasome regulato 29.6 2.1E+02 0.007 22.5 8.6 42 2-43 149-196 (434)
233 1nj1_A PROR, proline-tRNA synt 29.6 57 0.002 29.8 4.6 35 44-78 424-466 (501)
234 3d1k_A Hemoglobin subunit alph 29.6 1.2E+02 0.0042 22.2 5.8 15 8-22 26-40 (142)
235 2nrj_A HBL B protein; enteroto 29.5 64 0.0022 28.4 4.8 51 44-94 259-322 (346)
236 2pih_A Protein YMCA; regulate 29.2 1.3E+02 0.0046 23.4 6.1 34 71-107 95-128 (151)
237 2qfc_A PLCR protein; TPR, HTH, 29.0 97 0.0033 23.8 5.2 28 2-29 89-116 (293)
238 1hnr_A H-NS; histone-like prot 28.9 15 0.00052 24.8 0.5 8 165-172 18-25 (47)
239 4e6h_A MRNA 3'-END-processing 28.8 1.7E+02 0.0059 27.6 7.8 75 4-78 486-564 (679)
240 1gcv_B Hemoglobin; oxygen stor 28.8 1.6E+02 0.0056 21.9 6.4 16 8-23 25-40 (136)
241 2l93_A DNA-binding protein H-N 28.2 16 0.00054 25.7 0.5 9 164-172 17-25 (55)
242 3bom_A Hemoglobin subunit alph 28.1 1.2E+02 0.004 22.5 5.4 15 72-86 125-139 (143)
243 1sct_A Hemoglobin II (carbonmo 27.8 1.4E+02 0.0046 22.1 5.7 19 7-25 34-52 (150)
244 1y8m_A FIS1; mitochondria, unk 27.5 87 0.003 25.3 4.9 34 1-38 90-123 (144)
245 3q7a_A Farnesyltransferase alp 27.0 37 0.0013 29.9 2.8 22 3-24 69-90 (349)
246 2d9e_A Peregrin; four-helix bu 26.5 1.9E+02 0.0065 21.4 6.3 32 5-36 70-101 (121)
247 4hrt_B Hemoglobin B chain; oxy 26.1 1.4E+02 0.0049 22.2 5.6 18 7-24 36-53 (152)
248 1wmu_A Hemoglobin D alpha chai 25.9 1.9E+02 0.0066 21.0 6.4 15 72-86 123-137 (141)
249 1hlm_A Hemoglobin (cyano Met); 25.5 28 0.00096 25.9 1.6 18 72-89 140-157 (159)
250 3mv2_B Coatomer subunit epsilo 25.4 90 0.0031 27.1 5.0 24 2-25 114-139 (310)
251 1b89_A Protein (clathrin heavy 25.4 1.1E+02 0.0038 28.2 5.8 138 1-154 161-305 (449)
252 2uy1_A Cleavage stimulation fa 25.1 3.4E+02 0.012 23.8 8.6 21 4-24 336-356 (493)
253 2no2_A HIP-I, huntingtin-inter 25.1 2.2E+02 0.0077 21.5 7.2 22 55-76 54-75 (107)
254 3iu5_A Protein polybromo-1; PB 25.0 1.7E+02 0.0059 21.2 5.8 35 5-39 74-108 (116)
255 1lhs_A Myoglobin; oxygen stora 25.0 71 0.0024 23.9 3.7 18 72-89 129-146 (153)
256 2r80_B Hemoglobin subunit beta 24.7 1.8E+02 0.0063 21.4 6.0 15 72-86 128-142 (146)
257 1spg_A Hemoglobin; carbon mono 24.4 1.4E+02 0.0047 22.2 5.2 17 7-23 26-42 (144)
258 1hks_A Heat-shock transcriptio 24.3 11 0.00036 28.1 -1.0 40 189-228 6-52 (106)
259 2lse_A Four helix bundle prote 30.0 16 0.00055 28.3 0.0 65 29-105 29-94 (101)
260 2yin_A DOCK2, dedicator of cyt 24.1 2.1E+02 0.0071 25.9 7.2 56 16-71 371-434 (436)
261 3dss_A Geranylgeranyl transfer 23.6 51 0.0017 28.6 3.0 25 2-26 207-231 (331)
262 1out_A Hemoglobin I; heme, oxy 23.6 1.4E+02 0.0048 22.2 5.1 16 7-22 26-41 (143)
263 2aa1_B Hemoglobin beta-C chain 23.4 1.6E+02 0.0053 22.0 5.4 31 57-87 111-143 (146)
264 1jeb_A Hemoglobin zeta chain; 23.2 1.6E+02 0.0053 21.5 5.2 15 72-86 124-138 (142)
265 2lhb_A Hemoglobin V (cyano Met 23.1 1.6E+02 0.0055 21.7 5.3 20 64-86 127-146 (149)
266 3mb4_A Protein polybromo-1; PB 23.0 1.3E+02 0.0043 22.3 4.7 36 5-40 84-119 (124)
267 1f1m_A OSPC, outer surface pro 22.9 90 0.0031 26.3 4.2 31 19-52 3-33 (164)
268 1out_B Hemoglobin I; heme, oxy 22.9 1.8E+02 0.006 21.7 5.6 14 72-85 128-141 (146)
269 1hlb_A Hemoglobin (deoxy); oxy 22.6 1.2E+02 0.004 22.5 4.5 16 71-86 139-154 (158)
270 1dce_A Protein (RAB geranylger 22.4 47 0.0016 30.1 2.7 24 2-25 43-66 (567)
271 3ljw_A Protein polybromo-1; al 22.3 2E+02 0.007 21.0 5.8 35 5-39 77-111 (120)
272 1xq5_A Hemoglobin alpha-1 chai 21.9 2E+02 0.0068 21.2 5.7 15 7-21 26-40 (143)
273 2v6x_A Vacuolar protein sortin 21.8 2.1E+02 0.0071 19.9 6.5 14 3-16 28-41 (85)
274 1sct_B Hemoglobin II (carbonmo 21.7 1.8E+02 0.0062 21.4 5.4 22 7-28 35-56 (151)
275 3g2b_A Coenzyme PQQ synthesis 21.3 60 0.0021 23.7 2.6 36 51-86 52-89 (95)
276 4e8u_A Putative uncharacterize 21.0 50 0.0017 27.5 2.4 35 28-62 132-169 (172)
277 3qbr_A SJA, sjchgc06286 protei 21.0 3.6E+02 0.012 22.4 8.0 26 69-94 140-165 (179)
278 4hvc_A Bifunctional glutamate/ 21.0 97 0.0033 28.9 4.5 54 23-78 403-465 (519)
279 1eca_A Erythrocruorin (AQUO Me 20.7 2.5E+02 0.0086 20.6 6.0 18 71-88 118-135 (136)
280 2l92_A Histone family protein 20.6 28 0.00095 24.3 0.6 20 164-184 14-35 (50)
281 2w2u_A Hypothetical P60 katani 20.5 2E+02 0.0067 20.6 5.2 16 2-17 33-48 (83)
282 2r3z_A CXCL10, small-inducible 20.5 1E+02 0.0034 21.1 3.5 40 174-213 19-58 (68)
283 1sz9_A PCF11 protein; RNA poly 20.4 1.3E+02 0.0045 23.2 4.5 36 1-39 2-38 (144)
284 3qwp_A SET and MYND domain-con 20.4 1.6E+02 0.0055 25.7 5.6 42 2-43 301-347 (429)
285 2lev_A LER; transcription regu 20.4 28 0.00097 24.6 0.6 13 163-175 23-36 (57)
286 3p1f_A CREB-binding protein; s 20.2 1.7E+02 0.0059 21.3 4.9 33 5-37 77-109 (119)
287 1v4x_B Hemoglobin beta chain; 20.2 1.7E+02 0.0058 21.7 5.0 31 57-87 111-143 (146)
288 1g5z_A Outer surface protein C 20.1 92 0.0032 26.2 3.8 31 19-52 1-31 (164)
No 1
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.11 E-value=0.089 Score=35.39 Aligned_cols=27 Identities=15% Similarity=0.316 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~~ 44 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRAPEDARGYSNR 44 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 467777888888887777776654433
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.93 E-value=0.081 Score=37.47 Aligned_cols=29 Identities=24% Similarity=0.528 Sum_probs=24.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.||+.||.+.++-..+-.
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~~~~~la~ 47 (184)
T 3vtx_A 19 GDFDGAIRAYKKVLKADPNNVETLLKLGK 47 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 57999999999999999999987655433
No 3
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=94.80 E-value=0.1 Score=36.86 Aligned_cols=24 Identities=8% Similarity=0.075 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
.+|++|+..|+.||+++|.+...-
T Consensus 77 ~~~~~A~~~~~~al~~~p~~~~a~ 100 (162)
T 3rkv_A 77 GDLHEAEETSSEVLKREETNEKAL 100 (162)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred CcHHHHHHHHHHHHhcCCcchHHH
Confidence 567888888888888888876653
No 4
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.78 E-value=0.12 Score=34.78 Aligned_cols=27 Identities=15% Similarity=0.253 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-.-
T Consensus 20 ~g~~~~A~~~~~~al~~~p~~~~a~~~ 46 (100)
T 3ma5_A 20 HDNASRALALFEELVETDPDYVGTYYH 46 (100)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 468999999999999999999886443
No 5
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=94.59 E-value=0.16 Score=35.49 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=25.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 30 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 60 (121)
T 1hxi_A 30 LANLAEAALAFEAVCQKEPEREEAWRSLGLT 60 (121)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3579999999999999999999876654444
No 6
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.45 E-value=0.26 Score=32.72 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKR 40 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkr 40 (233)
.+|++|+..|+.|++.+|.+.....-.-.+..+....++
T Consensus 42 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~ 80 (148)
T 2dba_A 42 GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLED 80 (148)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHcc
Confidence 579999999999999999986555555555555444433
No 7
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=94.34 E-value=0.044 Score=44.25 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.||+.+|.+.+...-+-.
T Consensus 152 ~~y~~A~~~~~kal~~~p~~~~~~~~~~~ 180 (472)
T 4g1t_A 152 NQNERAKVCFEKALEKKPKNPEFTSGLAI 180 (472)
T ss_dssp THHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 47999999999999999999987655443
No 8
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.33 E-value=0.052 Score=39.68 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=22.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
+.+|++|+..|+.|++.+|.+.++--.+-
T Consensus 101 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg 129 (198)
T 2fbn_A 101 NKDYPKAIDHASKVLKIDKNNVKALYKLG 129 (198)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 46788899999999988888876654433
No 9
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.20 E-value=0.33 Score=32.35 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=24.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 51 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRAL 51 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHH
Confidence 357999999999999999999876554433
No 10
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=94.11 E-value=0.67 Score=29.62 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|++.+|.+..+-..+-
T Consensus 18 ~~~~~A~~~~~~a~~~~~~~~~~~~~la 45 (131)
T 1elr_A 18 KDFDTALKHYDKAKELDPTNMTYITNQA 45 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 5799999999999999999987654443
No 11
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=94.08 E-value=0.36 Score=30.78 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=25.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 25 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 55 (131)
T 2vyi_A 25 VENFEAAVHFYGKAIELNPANAVYFCNRAAA 55 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4689999999999999999998765544443
No 12
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=94.08 E-value=0.11 Score=35.19 Aligned_cols=23 Identities=13% Similarity=0.302 Sum_probs=11.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
.+|++|+..|+.|++.+|.+.++
T Consensus 41 ~~~~~A~~~~~~al~~~p~~~~~ 63 (117)
T 3k9i_A 41 GEYRKAEAVLANGVKQFPNHQAL 63 (117)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCchHH
Confidence 34555555555555555555443
No 13
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=94.02 E-value=0.18 Score=31.62 Aligned_cols=27 Identities=19% Similarity=0.440 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~~~~ 45 (112)
T 2kck_A 19 AGNYTESIDLFEKAIQLDPEESKYWLM 45 (112)
T ss_dssp SCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHH
Confidence 357999999999999999999876543
No 14
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=93.86 E-value=0.44 Score=29.94 Aligned_cols=30 Identities=20% Similarity=0.384 Sum_probs=24.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 47 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAA 47 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 579999999999999999998765544433
No 15
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=93.82 E-value=0.31 Score=34.34 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 27 g~~~~A~~~~~~al~~~p~~~~~~~~~ 53 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKRDPENAILYSNR 53 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 579999999999999999998876544
No 16
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.42 Score=32.02 Aligned_cols=27 Identities=11% Similarity=0.318 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 51 ~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 51 LMSFPEAIADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 468999999999999999999776443
No 17
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=93.77 E-value=0.2 Score=34.98 Aligned_cols=26 Identities=23% Similarity=0.222 Sum_probs=23.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+.+|+.|++.+|.+.++-.
T Consensus 64 ~g~~~~A~~~~~~al~l~P~~~~~~~ 89 (121)
T 1hxi_A 64 NEKDGLAIIALNHARMLDPKDIAVHA 89 (121)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 46899999999999999999988653
No 18
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.76 E-value=0.26 Score=33.38 Aligned_cols=29 Identities=17% Similarity=0.130 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
+.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 60 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 60 TECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 35789999999999999998877654433
No 19
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=93.70 E-value=0.26 Score=34.84 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=19.3
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l 51 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNR 51 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHH
Confidence 467788888888888888777654443
No 20
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=93.55 E-value=0.083 Score=34.07 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHH-HHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAE-VSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~E-vsrKIkrl 31 (233)
.+|++|+..|+.|++.+|.+.+ +-..+-.+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~ 44 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNA 44 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 5789999999999999999988 54444333
No 21
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=93.45 E-value=0.56 Score=31.20 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=25.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 56 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 56 MQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4689999999999999999998875544433
No 22
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=93.43 E-value=0.23 Score=40.70 Aligned_cols=25 Identities=12% Similarity=0.284 Sum_probs=16.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.||+++|.+...-.
T Consensus 210 g~~~~A~~~~~~al~~~p~~~~a~~ 234 (336)
T 1p5q_A 210 QAFSAAIESCNKALELDSNNEKGLS 234 (336)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4677777777777777776665443
No 23
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=93.42 E-value=0.33 Score=31.47 Aligned_cols=30 Identities=20% Similarity=0.408 Sum_probs=24.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 59 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAAC 59 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 579999999999999999998776554444
No 24
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.29 E-value=0.15 Score=32.68 Aligned_cols=26 Identities=15% Similarity=0.278 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+..|+.|++.+|.+.++-.
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~ 42 (111)
T 2l6j_A 17 QGLYREAVHCYDQLITAQPQNPVGYS 42 (111)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 36899999999999999999977643
No 25
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.25 E-value=0.16 Score=31.49 Aligned_cols=27 Identities=33% Similarity=0.577 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 22 ~~~~~~A~~~~~~a~~~~~~~~~~~~~ 48 (91)
T 1na3_A 22 QGDYDEAIEYYQKALELDPNNAEAWYN 48 (91)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 468999999999999999999776443
No 26
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=93.24 E-value=0.72 Score=30.60 Aligned_cols=26 Identities=31% Similarity=0.559 Sum_probs=21.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+..|+.|++.+|.+.++-.
T Consensus 32 ~g~~~~A~~~~~~al~~~p~~~~~~~ 57 (115)
T 2kat_A 32 HEQFDAALPHLRAALDFDPTYSVAWK 57 (115)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCHHHHHHHHHHHHHHCCCcHHHHH
Confidence 35788999999999999998877654
No 27
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=93.22 E-value=0.5 Score=33.35 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 58 ~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 58 SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 468999999999999999999776443
No 28
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.05 E-value=0.14 Score=36.20 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~l 113 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKL 113 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 456777777777777777776655443
No 29
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=93.00 E-value=0.77 Score=32.10 Aligned_cols=25 Identities=12% Similarity=0.409 Sum_probs=22.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.|++.+|.+.++-.
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~ 46 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYN 46 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5799999999999999999987644
No 30
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=92.95 E-value=0.16 Score=31.53 Aligned_cols=28 Identities=32% Similarity=0.669 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|.+.++-..+
T Consensus 56 ~~~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 56 QGDYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HhhHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4689999999999999999998765443
No 31
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=92.80 E-value=0.8 Score=28.87 Aligned_cols=26 Identities=35% Similarity=0.612 Sum_probs=22.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++...
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 48 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYN 48 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHH
Confidence 57999999999999999998776443
No 32
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=92.74 E-value=0.35 Score=34.10 Aligned_cols=25 Identities=12% Similarity=0.251 Sum_probs=21.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evs 25 (233)
|.+|++|+..|+.|++.+|.+.+.-
T Consensus 60 ~~~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 60 LMEFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hccHHHHHHHHHHHHHhhhhhhHHH
Confidence 4688999999999999999987753
No 33
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.65 E-value=0.52 Score=31.23 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 78 ~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 78 LEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp TTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 468999999999999999998766443
No 34
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.45 E-value=0.11 Score=32.70 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=23.1
Q ss_pred ChhhHHHHHHHHHHHhhCCC--cHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQ--SAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npq--s~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|. +.++-..+
T Consensus 53 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 53 LERYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp TTCHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 46899999999999999999 77664433
No 35
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=92.42 E-value=0.76 Score=33.42 Aligned_cols=39 Identities=13% Similarity=0.236 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKR 40 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkr 40 (233)
.+|++|+..|+.|++.+|.+.++-..+.++-....+..+
T Consensus 136 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 136 GFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999988777766555444333
No 36
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=92.33 E-value=0.39 Score=35.92 Aligned_cols=25 Identities=12% Similarity=0.095 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.|++.||.+.+.-.
T Consensus 50 g~~~eA~~~~~~al~~~P~~~~~~~ 74 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIYDFYNVDYIM 74 (151)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5677777777777777777776543
No 37
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=92.25 E-value=0.15 Score=43.86 Aligned_cols=25 Identities=16% Similarity=0.306 Sum_probs=18.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evs 25 (233)
+.+|++|+..|+.||+++|++...-
T Consensus 330 ~g~~~~A~~~~~~al~~~p~~~~a~ 354 (457)
T 1kt0_A 330 LREYTKAVECCDKALGLDSANEKGL 354 (457)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHH
Confidence 3567778888888888777776543
No 38
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=92.24 E-value=0.35 Score=32.67 Aligned_cols=41 Identities=7% Similarity=0.063 Sum_probs=23.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRA 41 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra 41 (233)
+.+|++|+..|+.|++.++.+.....-.-.|..+.....+-
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~ 43 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEY 43 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCH
Confidence 46899999999999999644443333344444444444333
No 39
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=92.13 E-value=0.22 Score=34.81 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.|++.+|.+.++-..+-.
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 60 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGLGA 60 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHH
Confidence 57888888888888888888876554433
No 40
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=92.10 E-value=0.74 Score=32.08 Aligned_cols=28 Identities=11% Similarity=0.224 Sum_probs=23.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|.+.++--.+
T Consensus 65 ~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 65 LGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred HhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 4689999999999999999999875443
No 41
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=92.10 E-value=0.5 Score=34.06 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++-..
T Consensus 35 g~~~~A~~~~~~al~~~p~~~~~~~~ 60 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVLDHYDSRFFLG 60 (148)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCcccHHHHHH
Confidence 46777777777777777777666543
No 42
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=92.03 E-value=1.3 Score=33.28 Aligned_cols=26 Identities=42% Similarity=0.571 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++-..
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~a~~~ 44 (217)
T 2pl2_A 19 GRYDAALTLFERALKENPQDPEALYW 44 (217)
T ss_dssp TCHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 35566666666666666665555433
No 43
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=92.00 E-value=0.22 Score=35.74 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=20.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.|++.||.+.++-..+
T Consensus 44 ~~~~~~A~~~~~~al~~~p~~~~a~~~l 71 (150)
T 4ga2_A 44 AKEYDLAKKYICTYINVQERDPKAHRFL 71 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3567888888888888888877664443
No 44
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=91.92 E-value=0.7 Score=34.76 Aligned_cols=27 Identities=26% Similarity=0.306 Sum_probs=23.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~l 124 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQR 124 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 589999999999999999999876543
No 45
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=91.88 E-value=0.39 Score=40.68 Aligned_cols=27 Identities=19% Similarity=0.406 Sum_probs=21.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.||+.+|.+.+.--.
T Consensus 286 ~g~~~~A~~~~~~al~~~p~~~~a~~~ 312 (370)
T 1ihg_A 286 MSDWQGAVDSCLEALEIDPSNTKALYR 312 (370)
T ss_dssp TTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 467899999999999999988766443
No 46
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.77 E-value=0.92 Score=37.15 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=31.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRA 41 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra 41 (233)
+.+|++|+..|+.||+.+|.+.++-..+..+-...++...+
T Consensus 243 ~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 243 VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999998877666665554444433
No 47
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=91.68 E-value=0.38 Score=33.30 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=27.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQL 34 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL 34 (233)
+.+|++|+..|+.||+++|.+.++-..++-+.++
T Consensus 59 ~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~~ 92 (104)
T 2v5f_A 59 QGDLDKALLLTKKLLELDPEHQRANGNLKYFEYI 92 (104)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHHH
Confidence 3579999999999999999998886655544443
No 48
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=91.53 E-value=0.25 Score=31.56 Aligned_cols=21 Identities=24% Similarity=0.553 Sum_probs=19.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|++.+|.+
T Consensus 51 ~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 51 LGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp TTCHHHHHHHHHHHHTSCSST
T ss_pred hcCHHHHHHHHHHHHHhCCCc
Confidence 468999999999999999998
No 49
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=91.48 E-value=0.31 Score=31.30 Aligned_cols=24 Identities=29% Similarity=0.634 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
.+|++|+..|+.|++.+|.+.++-
T Consensus 49 ~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 49 GDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcHHHH
Confidence 578889999999999998888765
No 50
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=91.42 E-value=1.1 Score=32.02 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=21.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.|++.+|.+.++-..+-.
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 181 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAA 181 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 57888888888888888888766544433
No 51
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=91.21 E-value=0.26 Score=35.40 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=25.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
+.+|++|+..|+.|++.||.+.++-..+-.
T Consensus 78 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 78 EENTDKAVECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 468999999999999999999987655443
No 52
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=91.21 E-value=0.21 Score=35.09 Aligned_cols=23 Identities=4% Similarity=0.238 Sum_probs=19.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAE 23 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~E 23 (233)
|.+|++|+..|+.|++.+|.+..
T Consensus 55 ~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 55 EKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHHhCcccch
Confidence 57899999999999999987643
No 53
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=91.19 E-value=0.92 Score=32.00 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 58 ~~~~~A~~~~~~al~~~p~~~~~~~~la 85 (177)
T 2e2e_A 58 NDYSNSLLAYRQALQLRGENAELYAALA 85 (177)
T ss_dssp TCHHHHHHHHHHHHHHHCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 5677788888888888877766544433
No 54
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=91.13 E-value=0.39 Score=30.74 Aligned_cols=20 Identities=10% Similarity=0.282 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHhhCCCc
Q 026807 2 EQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs 21 (233)
.+|++|+..|+.|++.+|.+
T Consensus 52 ~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 52 GDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHhhcccc
Confidence 57899999999999998765
No 55
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=91.12 E-value=1.7 Score=34.39 Aligned_cols=23 Identities=30% Similarity=0.401 Sum_probs=13.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
.+|++|+..|+.|++.+|.+..+
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~~~ 74 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQSVKA 74 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTCHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCHHH
Confidence 45555666666666655555543
No 56
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=91.12 E-value=1.4 Score=28.84 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLA 35 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~ 35 (233)
.+|++|+..|+.+++.+|.+.....-.-.+..+.
T Consensus 16 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~ 49 (129)
T 2xev_A 16 GKYDDASQLFLSFLELYPNGVYTPNALYWLGESY 49 (129)
T ss_dssp TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHH
Confidence 5799999999999999999884333333344433
No 57
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=91.11 E-value=0.22 Score=39.93 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
++|++|+..|+.||+.||.+.+.
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHH
Confidence 47999999999999999998543
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=91.11 E-value=1.7 Score=29.16 Aligned_cols=26 Identities=15% Similarity=0.247 Sum_probs=17.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.+++.+|.+.++-..
T Consensus 56 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 81 (186)
T 3as5_A 56 GAVDRGTELLERSLADAPDNVKVATV 81 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 46777777777777777777665443
No 59
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=91.00 E-value=0.94 Score=32.47 Aligned_cols=29 Identities=10% Similarity=0.267 Sum_probs=24.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
+.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 186 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 186 LMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 46899999999999999999987755443
No 60
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=90.92 E-value=1.4 Score=27.78 Aligned_cols=28 Identities=32% Similarity=0.590 Sum_probs=23.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.+++.+|.+.++...+
T Consensus 56 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 56 QGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 3579999999999999999998765433
No 61
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=90.88 E-value=2 Score=27.05 Aligned_cols=26 Identities=38% Similarity=0.639 Sum_probs=21.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.+++.+|.+.++-..
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 40 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYN 40 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHH
Confidence 47899999999999999998765443
No 62
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.84 E-value=1.3 Score=32.50 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=13.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
.+|++|+..|+.|++.+|.+.++-
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~ 79 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAY 79 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHH
Confidence 345555555555555555554443
No 63
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=90.71 E-value=0.45 Score=35.56 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=23.4
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
+.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 67 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg 95 (208)
T 3urz_A 67 NRNYDKAYLFYKELLQKAPNNVDCLEACA 95 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 46799999999999999999987754433
No 64
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=90.55 E-value=1.2 Score=31.24 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=23.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.+++.+|.+.++-..+-.+
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 51 (225)
T 2vq2_A 22 QDYRQATASIEDALKSDPKNELAWLVRAEI 51 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 578999999999999999987765544433
No 65
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=90.52 E-value=0.67 Score=29.07 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 52 ~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (118)
T 1elw_A 52 GDYQKAYEDGCKTVDLKPDWGKGYSRK 78 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 579999999999999999987765433
No 66
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=90.45 E-value=2 Score=27.03 Aligned_cols=27 Identities=37% Similarity=0.650 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.+++.+|.+..+-..+
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 75 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNL 75 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 479999999999999999987765443
No 67
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=90.39 E-value=1.4 Score=29.57 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.+++.+|++.++-..+-.
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 57999999999999999999877654433
No 68
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=90.34 E-value=0.81 Score=34.21 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=24.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+.+|+.|++.+|.+.+.-..+
T Consensus 83 ~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 83 KEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp TTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred HccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 4689999999999999999999875543
No 69
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=90.24 E-value=1.2 Score=32.59 Aligned_cols=26 Identities=27% Similarity=0.195 Sum_probs=18.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++-..
T Consensus 57 ~~~~~A~~~~~~al~~~~~~~~~~~~ 82 (275)
T 1xnf_A 57 GLRALARNDFSQALAIRPDMPEVFNY 82 (275)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 46777777777777777777665443
No 70
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=90.17 E-value=1.4 Score=31.71 Aligned_cols=28 Identities=18% Similarity=0.233 Sum_probs=23.7
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|.+.++-..+
T Consensus 68 ~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 68 MGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred HhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 4689999999999999999998875443
No 71
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=90.13 E-value=1.4 Score=31.51 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=18.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.+++.+|.+.++-..+-
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la 98 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAG 98 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 4677777777777777777766554443
No 72
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=89.95 E-value=2.1 Score=27.59 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=22.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|++.+|.+.++-..
T Consensus 63 ~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 63 LLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 368999999999999999998776543
No 73
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=89.89 E-value=1.9 Score=28.99 Aligned_cols=29 Identities=21% Similarity=0.415 Sum_probs=23.9
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
+.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a 54 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRS 54 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 35799999999999999999987655443
No 74
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=89.83 E-value=0.98 Score=35.17 Aligned_cols=25 Identities=24% Similarity=0.487 Sum_probs=15.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.|++.+|.+.++-.
T Consensus 227 g~~~~A~~~~~~al~~~p~~~~~~~ 251 (365)
T 4eqf_A 227 GEFNRAIDAFNAALTVRPEDYSLWN 251 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3566666666666666666655443
No 75
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=89.73 E-value=0.52 Score=37.75 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=16.5
Q ss_pred ChhhHHHHHHHHHHHhh-------CCCcHHH
Q 026807 1 MEQYDDALSAFQTALQY-------NPQSAEV 24 (233)
Q Consensus 1 me~y~dAlaafq~Alq~-------npqs~Ev 24 (233)
+.+|++||..|..||++ ||.....
T Consensus 70 Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A 100 (159)
T 2hr2_A 70 LRSFDEALHSADKALHYFNRRGELNQDEGKL 100 (159)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCCTTSTHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhccccCCCchHHH
Confidence 35677777777777777 7766544
No 76
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=89.71 E-value=1.5 Score=28.70 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=20.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAE 23 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~E 23 (233)
+.+|++|+..|+.+++.+|.+..
T Consensus 52 ~~~~~~A~~~~~~~~~~~p~~~~ 74 (129)
T 2xev_A 52 TRNFQLAEAQFRDLVSRYPTHDK 74 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCTTSTT
T ss_pred hccHHHHHHHHHHHHHHCCCCcc
Confidence 35899999999999999999943
No 77
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=89.22 E-value=1.9 Score=31.48 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=21.8
Q ss_pred hhhHHHHHHHHHHHhhCC-CcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNP-QSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np-qs~EvsrK 27 (233)
.+|++|+..|+.|++.+| ++..+...
T Consensus 21 ~~~~~A~~~~~~al~~~~~~~~~~~~~ 47 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNNQDSVTAYN 47 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCCCcHHHHH
Confidence 589999999999999999 77765444
No 78
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.21 E-value=1.2 Score=33.38 Aligned_cols=24 Identities=29% Similarity=0.570 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
.+|++|+..|+.+++.+|.+.++.
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~~~~~ 271 (359)
T 3ieg_A 248 GRYTDATSKYESVMKTEPSVAEYT 271 (359)
T ss_dssp TCHHHHHHHHHHHHHHCCSSHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHH
Confidence 467777777777777777776543
No 79
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.18 E-value=0.88 Score=33.93 Aligned_cols=42 Identities=26% Similarity=0.342 Sum_probs=30.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQ 42 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra~ 42 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.+-....+-..|.
T Consensus 249 ~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~ 290 (330)
T 3hym_B 249 LKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAV 290 (330)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHH
T ss_pred hcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHH
Confidence 368999999999999999999887665554444333333443
No 80
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=89.12 E-value=1.7 Score=31.07 Aligned_cols=28 Identities=21% Similarity=0.349 Sum_probs=23.4
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.+++.+|.+.++-..+
T Consensus 104 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 131 (243)
T 2q7f_A 104 KEMYKEAKDMFEKALRAGMENGDLFYML 131 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3679999999999999999998765443
No 81
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.95 E-value=1.4 Score=37.80 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=17.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|++.++-..
T Consensus 71 g~~~~A~~~~~~al~~~p~~~~~~~~ 96 (568)
T 2vsy_A 71 QRHAEAAVLLQQASDAAPEHPGIALW 96 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 46777777777777777777655443
No 82
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=88.72 E-value=1 Score=33.57 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=25.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 102 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 131 (208)
T 3urz_A 102 GQEKDALRMYEKILQLEADNLAANIFLGNY 131 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 579999999999999999999877665544
No 83
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=88.64 E-value=0.13 Score=42.46 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=23.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.||+.+|.+...-..+
T Consensus 243 ~g~~~~A~~~~~~al~~~p~~~~a~~~l 270 (338)
T 2if4_A 243 LKRYDEAIGHCNIVLTEEEKNPKALFRR 270 (338)
T ss_dssp TTCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4689999999999999999987765443
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=88.50 E-value=4.8 Score=28.09 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=17.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.+++.+|.+.++-..+
T Consensus 127 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 153 (225)
T 2vq2_A 127 GQFGLAEAYLKRSLAAQPQFPPAFKEL 153 (225)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 457777777777777777766554433
No 85
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=88.43 E-value=3.3 Score=33.12 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=24.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.||.+.+.-..+
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~ 42 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRW 42 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 579999999999999999999987643
No 86
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=88.02 E-value=2.1 Score=31.91 Aligned_cols=22 Identities=27% Similarity=0.208 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+|++|+..|+.|++.+|.+.++
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~ 161 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLP 161 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHH
T ss_pred CHHHHHHHHHHHHHhccccHHH
Confidence 4555555555555555554444
No 87
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=87.57 E-value=2.9 Score=32.04 Aligned_cols=22 Identities=32% Similarity=0.590 Sum_probs=12.2
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+|++|+..|+.|++.+|.+.++
T Consensus 232 ~~~~A~~~~~~al~~~~~~~~~ 253 (368)
T 1fch_A 232 EYDKAVDCFTAALSVRPNDYLL 253 (368)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHhCcCCHHH
Confidence 4555555555555555555443
No 88
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=87.56 E-value=1.2 Score=32.07 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=25.7
Q ss_pred ChhhHHHHHHHHHHHhhC-----CCcHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYN-----PQSAEVSRKIKRVSQLAKDKK 39 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n-----pqs~EvsrKIkrlsqL~k~kk 39 (233)
+.+|++|+..|+.|++.. +.+.....-...|..+.....
T Consensus 56 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 99 (283)
T 3edt_B 56 QNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG 99 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc
Confidence 367999999999999885 444555555555555544433
No 89
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=87.50 E-value=3.1 Score=30.89 Aligned_cols=22 Identities=27% Similarity=0.617 Sum_probs=10.5
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+|++|+..|+.+++.+|.+.++
T Consensus 153 ~~~~A~~~~~~~~~~~~~~~~~ 174 (327)
T 3cv0_A 153 EYRECRTLLHAALEMNPNDAQL 174 (327)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHH
T ss_pred cHHHHHHHHHHHHhhCCCCHHH
Confidence 3444555555555555444433
No 90
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=87.48 E-value=2.2 Score=31.10 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHHHhhCCCcHHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Evs 25 (233)
+|++|+..|+.|++.+|.+.++-
T Consensus 156 ~~~~A~~~~~~~~~~~~~~~~~~ 178 (252)
T 2ho1_A 156 KPAQAKEYFEKSLRLNRNQPSVA 178 (252)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CHHHHHHHHHHHHhcCcccHHHH
Confidence 45556666666666555554443
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=87.31 E-value=1 Score=33.77 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=27.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLA 35 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~ 35 (233)
.++++|+..|+.+++.+|+|..+..-..+|..+.
T Consensus 110 ~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~ 143 (225)
T 2yhc_A 110 QQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLK 143 (225)
T ss_dssp HHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHH
Confidence 4799999999999999999998766555555554
No 92
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=87.27 E-value=1.2 Score=28.22 Aligned_cols=26 Identities=15% Similarity=0.314 Sum_probs=22.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+..|+.|++.+|.+.++-.
T Consensus 59 ~~~~~~A~~~~~~~~~~~~~~~~~~~ 84 (131)
T 2vyi_A 59 LGNYAGAVQDCERAICIDPAYSKAYG 84 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhchHHHHHHHHHHHhcCccCHHHHH
Confidence 35799999999999999999876543
No 93
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=87.11 E-value=1.8 Score=30.87 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|.+.++-..+
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~l 77 (213)
T 1hh8_A 50 LKNMTEAEKAFTRSINRDKHLAVAYFQR 77 (213)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3679999999999999999987765433
No 94
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.00 E-value=2 Score=33.36 Aligned_cols=28 Identities=7% Similarity=0.137 Sum_probs=22.8
Q ss_pred ChhhHHHHHHHHHHHhhCCC--cHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQ--SAEVSRKI 28 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npq--s~EvsrKI 28 (233)
+.+|++|+..|+.|++.+|. +.++-..+
T Consensus 190 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 219 (365)
T 4eqf_A 190 SSVLEGVKELYLEAAHQNGDMIDPDLQTGL 219 (365)
T ss_dssp CHHHHHHHHHHHHHHHHSCSSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCccCHHHHHHH
Confidence 36899999999999999999 66654433
No 95
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.91 E-value=0.96 Score=35.90 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=17.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 309 g~~~~A~~~~~~a~~~~p~~~~~~~~l 335 (450)
T 2y4t_A 309 EKPVEAIRVCSEVLQMEPDNVNALKDR 335 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 467777777777777777766554433
No 96
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=86.91 E-value=3.1 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=23.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.+++.+|.+.++-..+-
T Consensus 35 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 62 (327)
T 3cv0_A 35 ANLAEAALAFEAVCQAAPEREEAWRSLG 62 (327)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5799999999999999999988765443
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=86.85 E-value=0.42 Score=39.35 Aligned_cols=34 Identities=24% Similarity=0.528 Sum_probs=14.8
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQL 34 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL 34 (233)
+.+|++|+..|+.|++.+|.+.++...+.+|.+.
T Consensus 277 ~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 277 LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp TTCHHHHHHHHHHTTC------------------
T ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999988877776443
No 98
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.77 E-value=0.67 Score=32.61 Aligned_cols=18 Identities=17% Similarity=0.409 Sum_probs=8.9
Q ss_pred hhHHHHHHHHHHHhhCCC
Q 026807 3 QYDDALSAFQTALQYNPQ 20 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npq 20 (233)
+|++|+..|+.+|+.+|+
T Consensus 58 ~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 58 RFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHHHHHHhhCCC
Confidence 445555555555555444
No 99
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=86.52 E-value=0.64 Score=36.87 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=19.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|++.+|.+
T Consensus 85 ~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 85 MESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCccc
Confidence 468999999999999999976
No 100
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=86.48 E-value=1.5 Score=37.78 Aligned_cols=40 Identities=25% Similarity=0.459 Sum_probs=28.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKR 40 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkr 40 (233)
+.+|++|+..|+.||+++|++.++-..+.++-+..++.++
T Consensus 364 ~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~ 403 (457)
T 1kt0_A 364 MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNE 403 (457)
T ss_dssp TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999887777766655554433
No 101
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=86.06 E-value=2.4 Score=33.30 Aligned_cols=17 Identities=12% Similarity=0.239 Sum_probs=11.3
Q ss_pred HHHHHhhhhccCCCCce
Q 026807 85 METAVKSWHETSKVDAK 101 (233)
Q Consensus 85 ~e~Avk~whe~~kvd~~ 101 (233)
.+.|++.+.....+||.
T Consensus 256 ~~~A~~~~~~~~~l~~~ 272 (292)
T 1qqe_A 256 LSEHCKEFDNFMRLDKW 272 (292)
T ss_dssp HHHHHHHHTTSSCCCHH
T ss_pred HHHHHHHhccCCccHHH
Confidence 45677777666667663
No 102
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.03 E-value=3.9 Score=29.74 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=15.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.|++.+|.+.++-.
T Consensus 85 ~~~~~A~~~~~~a~~~~~~~~~~~~ 109 (252)
T 2ho1_A 85 MEPKLADEEYRKALASDSRNARVLN 109 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHH
Confidence 3566666666666666666655443
No 103
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=85.99 E-value=1.2 Score=35.82 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=15.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
.+|++|+..|+.||+.+|...+.
T Consensus 348 ~~~~~A~~~~~kaL~~~~~~~~~ 370 (472)
T 4g1t_A 348 DQYEEAEYYFQKEFSKELTPVAK 370 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCCHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCChHH
Confidence 46677777777777776665543
No 104
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=85.98 E-value=1.5 Score=37.60 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=14.4
Q ss_pred hhhHHHHHHHHHHHhhCC---CcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNP---QSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np---qs~Evsr 26 (233)
.+|++|+..|+.|++.+| .+.++-.
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~ 262 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHL 262 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 356666666666666666 5554433
No 105
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.78 E-value=2.1 Score=40.49 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=10.6
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+|++|+..|+.||++||++.+.
T Consensus 58 ~~~eA~~~~~~Al~l~P~~~~a 79 (723)
T 4gyw_A 58 KLQEALMHYKEAIRISPTFADA 79 (723)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHH
Confidence 4444555555555555444443
No 106
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.55 E-value=2.8 Score=39.66 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=22.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+.+|++|+..|+.|+++||.+.+.-..
T Consensus 90 ~g~~~~A~~~~~kAl~l~P~~~~a~~~ 116 (723)
T 4gyw_A 90 MQDVQGALQCYTRAIQINPAFADAHSN 116 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 468999999999999999999876543
No 107
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=85.36 E-value=3.7 Score=31.42 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 78 g~~~~A~~~~~~al~~~p~~~~~~~~l~ 105 (368)
T 1fch_A 78 GDLPNAVLLFEAAVQQDPKHMEAWQYLG 105 (368)
T ss_dssp TCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5799999999999999999987655443
No 108
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=85.17 E-value=6.6 Score=28.21 Aligned_cols=38 Identities=16% Similarity=0.354 Sum_probs=24.7
Q ss_pred ChhhHHHHHHHHHHHhhC-----CCcHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYN-----PQSAEVSRKIKRVSQLAKDK 38 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n-----pqs~EvsrKIkrlsqL~k~k 38 (233)
+.+|++|+..|+.|++.. |.+.....-.-.|..+....
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 140 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQ 140 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHc
Confidence 368999999999999983 44444444444455444433
No 109
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=84.80 E-value=1.5 Score=32.92 Aligned_cols=35 Identities=6% Similarity=0.136 Sum_probs=27.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAK 36 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k 36 (233)
.+|++|+..|+.+++.+|++..+..-.-+|.....
T Consensus 161 ~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~ 195 (225)
T 2yhc_A 161 GAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYR 195 (225)
T ss_dssp TCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHH
Confidence 57999999999999999999876555555544443
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=84.73 E-value=2.2 Score=36.57 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg 64 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLG 64 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5799999999999999999987755443
No 111
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=84.36 E-value=7 Score=28.75 Aligned_cols=40 Identities=15% Similarity=0.379 Sum_probs=26.1
Q ss_pred ChhhHHHHHHHHHHHhhC-----CCcHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYN-----PQSAEVSRKIKRVSQLAKDKKR 40 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n-----pqs~EvsrKIkrlsqL~k~kkr 40 (233)
+.+|++|+..|+.|++.. +.+.....-.-.|..+.....+
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 168 (311)
T 3nf1_A 124 RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGK 168 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCC
Confidence 467999999999999985 4445555444455554444333
No 112
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=83.89 E-value=6.1 Score=29.66 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=25.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQL 34 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL 34 (233)
+.+|++|+..|+.+++.+|.+.....-.-.|..+
T Consensus 161 ~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~ 194 (261)
T 3qky_A 161 RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRA 194 (261)
T ss_dssp TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHH
Confidence 4689999999999999999976554444444443
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=83.88 E-value=1.6 Score=31.30 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++-.-
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~ 45 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLA 45 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHH
Confidence 45677777777777777777665443
No 114
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=83.78 E-value=8 Score=29.00 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=25.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
+.+|++|+..|+.+++.+|.+..+..-..++
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~ 140 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELVDDATQKI 140 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCcCchhHHHHHHHH
Confidence 4689999999999999999997766544444
No 115
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=83.55 E-value=12 Score=27.93 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=17.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.+++.+|.+.++-..+
T Consensus 168 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 194 (359)
T 3ieg_A 168 GEPRKAISDLKAASKLKSDNTEAFYKI 194 (359)
T ss_dssp TCHHHHHHHHHHHHTTCSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 456667777777777666666554433
No 116
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=83.50 E-value=7.6 Score=33.30 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=23.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|++.+|.+.++-..+-
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg 220 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILG 220 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 6899999999999999999988655443
No 117
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=83.32 E-value=2.4 Score=31.25 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=25.0
Q ss_pred ChhhHHHHHHHHHHHhhC-----CCcHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYN-----PQSAEVSRKIKRVSQLAKDK 38 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n-----pqs~EvsrKIkrlsqL~k~k 38 (233)
+.+|++|+..|+.|++.. +.+.....-.-.|..+....
T Consensus 82 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (311)
T 3nf1_A 82 QNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR 124 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHc
Confidence 358999999999999984 33444444444555544433
No 118
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=83.25 E-value=3.3 Score=36.13 Aligned_cols=26 Identities=23% Similarity=0.501 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
.+|++|+..|+.|++.+|.+.++-..
T Consensus 20 g~~~~A~~~~~~Al~~~p~~~~~~~~ 45 (477)
T 1wao_1 20 KDYENAIKFYSQAIELNPSNAIYYGN 45 (477)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 57888888888888888887665443
No 119
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=83.04 E-value=11 Score=27.39 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
.+|++|+..|+.|++.+|.+.+.
T Consensus 19 g~~~~A~~~~~~al~~~~~~~~~ 41 (338)
T 3ro2_A 19 GDCRAGVSFFEAAVQVGTEDLKT 41 (338)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHH
T ss_pred ccHHHHHHHHHHHHhhCcccHHH
Confidence 57999999999999999998653
No 120
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=82.94 E-value=3.1 Score=29.23 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=22.3
Q ss_pred hhh--HHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQY--DDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y--~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+| ++|+..|+.|++.+|.+.++-.-+
T Consensus 93 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l 121 (177)
T 2e2e_A 93 SQHMTAQTRAMIDKALALDSNEITALMLL 121 (177)
T ss_dssp TTCCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 466 999999999999999998765443
No 121
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=82.54 E-value=1.9 Score=31.70 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|+..|+.|++.+|.+.++-..+-.
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 116 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGS 116 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 46777777777777777777766544433
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=82.34 E-value=2 Score=31.35 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~l 117 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNR 117 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHH
Confidence 568888888888888888877665443
No 123
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=82.29 E-value=1.2 Score=38.85 Aligned_cols=33 Identities=15% Similarity=0.437 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRVSQL 34 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL 34 (233)
.+|++|+..|+.|++.+|.+.+....+..+.++
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~ 120 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 120 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 467777777777777777776665555554333
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=82.08 E-value=6.7 Score=30.75 Aligned_cols=22 Identities=14% Similarity=0.074 Sum_probs=10.4
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
++++|+.+|+.|++.+|.+.++
T Consensus 149 ~~~~A~~~~~~a~~~~p~~~~~ 170 (308)
T 2ond_A 149 GIKSGRMIFKKAREDARTRHHV 170 (308)
T ss_dssp CHHHHHHHHHHHHTSTTCCTHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHH
Confidence 3444555555555544444433
No 125
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=81.95 E-value=2.3 Score=33.52 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
.+|++|+..|+.|++.+|.+.++-.
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~ 275 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYC 275 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHH
Confidence 5688888888888888888777643
No 126
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=80.97 E-value=2.2 Score=33.73 Aligned_cols=29 Identities=28% Similarity=0.405 Sum_probs=24.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.+|++|++.|+.||+.+|.+.+.-.-+-+
T Consensus 131 g~~~~A~~~~~~al~~~P~~~~a~~~la~ 159 (287)
T 3qou_A 131 SNYTDALPLLXDAWQLSNQNGEIGLLLAE 159 (287)
T ss_dssp TCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcchhHHHHHHH
Confidence 47999999999999999999887554443
No 127
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=80.94 E-value=6.4 Score=33.33 Aligned_cols=25 Identities=16% Similarity=0.092 Sum_probs=17.9
Q ss_pred hhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
++++|+..|+.||+.+|.+.++-..
T Consensus 406 ~~~~A~~~~e~al~~~p~~~~~~~~ 430 (530)
T 2ooe_A 406 DKSVAFKIFELGLKKYGDIPEYVLA 430 (530)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ChhHHHHHHHHHHHHCCCCHHHHHH
Confidence 5677777788888777777766543
No 128
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.70 E-value=19 Score=28.42 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=18.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.|++.+|.+.....-+.++
T Consensus 225 g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~ 254 (450)
T 2y4t_A 225 GDHELSLSEVRECLKLDQDHKRCFAHYKQV 254 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCChHHHHHHHHHH
Confidence 456677777777777777666655444333
No 129
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=80.58 E-value=2.2 Score=30.44 Aligned_cols=22 Identities=27% Similarity=0.304 Sum_probs=19.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCcH
Q 026807 1 MEQYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~ 22 (233)
+.+|++|+..|+.|++.+|.+.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCS
T ss_pred cccHHHHHHHHHHHHHhCCCcc
Confidence 4689999999999999988766
No 130
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=79.86 E-value=6 Score=26.03 Aligned_cols=26 Identities=4% Similarity=0.073 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
++|+..|+.|++.+|.+..+-..+-.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~ 27 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGK 27 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 57999999999999999876554433
No 131
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=79.61 E-value=1.3 Score=35.51 Aligned_cols=26 Identities=19% Similarity=0.219 Sum_probs=21.7
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+..|+.||+.+|.+.++-.
T Consensus 213 ~g~~~eA~~~l~~al~~~p~~~~~l~ 238 (291)
T 3mkr_A 213 QGRWEAAEGVLQEALDKDSGHPETLI 238 (291)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 46889999999999999999888743
No 132
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=79.32 E-value=3 Score=33.40 Aligned_cols=27 Identities=26% Similarity=0.459 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRK 27 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrK 27 (233)
+++|++|+..++.+|+.+|.+.....-
T Consensus 84 l~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 84 LKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 578999999999999999988765443
No 133
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=79.27 E-value=1.9 Score=34.41 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=18.5
Q ss_pred hhhHHHHHHHHHHHhhCCCc
Q 026807 2 EQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs 21 (233)
.+|++|+..|+.||+++|.+
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~ 44 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTM 44 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHhhCCCC
Confidence 58999999999999999993
No 134
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=78.66 E-value=22 Score=27.83 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHHhhCCCcHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAE 23 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~E 23 (233)
.+|++|+..|+.|++.+|.+.+
T Consensus 62 g~~~~A~~~~~~al~~~~~~~~ 83 (411)
T 4a1s_A 62 GDCRAGVAFFQAAIQAGTEDLR 83 (411)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHH
T ss_pred CcHHHHHHHHHHHHHhcccChh
Confidence 5799999999999999999875
No 135
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=78.60 E-value=5.4 Score=31.92 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=8.2
Q ss_pred hhHHHHHHHHHHHhhC
Q 026807 3 QYDDALSAFQTALQYN 18 (233)
Q Consensus 3 ~y~dAlaafq~Alq~n 18 (233)
+|++|+..|+.|++..
T Consensus 276 ~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 276 QTQKAFQFIEEGLDHI 291 (378)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHH
Confidence 4555555555555543
No 136
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=78.23 E-value=8.9 Score=30.13 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=25.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
.+|++|+..|+.+++.+|.+.++...+-.+
T Consensus 13 g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 42 (388)
T 1w3b_A 13 GDFEAAERHCMQLWRQEPDNTGVLLLLSSI 42 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 479999999999999999999887655544
No 137
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=78.22 E-value=5.6 Score=32.22 Aligned_cols=27 Identities=22% Similarity=0.296 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.+++.+|.+.++-..+
T Consensus 290 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 316 (537)
T 3fp2_A 290 ENSQEFFKFFQKAVDLNPEYPPTYYHR 316 (537)
T ss_dssp SCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 467777777777777777776664433
No 138
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=77.89 E-value=7.2 Score=31.60 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=24.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRV 31 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrl 31 (233)
+.+|++|+..|+.|++.+|.+.++-..+-.+
T Consensus 323 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 353 (537)
T 3fp2_A 323 LQDYKNAKEDFQKAQSLNPENVYPYIQLACL 353 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3579999999999999999988765544333
No 139
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=77.20 E-value=1 Score=32.35 Aligned_cols=25 Identities=12% Similarity=0.021 Sum_probs=21.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+.+|++|+..|+.|++.+| +.++..
T Consensus 53 ~g~~~~A~~~~~~a~~~~p-~~~~~~ 77 (176)
T 2r5s_A 53 TKQFELAQELLATIPLEYQ-DNSYKS 77 (176)
T ss_dssp TTCHHHHHHHHTTCCGGGC-CHHHHH
T ss_pred CCCHHHHHHHHHHhhhccC-ChHHHH
Confidence 3589999999999999999 776543
No 140
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.88 E-value=23 Score=27.98 Aligned_cols=22 Identities=18% Similarity=0.416 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAE 23 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~E 23 (233)
.+|++|+..|+.+++.+|.+.+
T Consensus 18 ~~y~eA~~~~~~~l~~~~~~~~ 39 (434)
T 4b4t_Q 18 KQYNEAEQVYLSLLDKDSSQSS 39 (434)
T ss_dssp TCHHHHHHHHHHHHHSCCCSSS
T ss_pred CCHHHHHHHHHHHHhhCcccch
Confidence 4799999999999999987643
No 141
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=76.73 E-value=16 Score=25.34 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=22.3
Q ss_pred ChhhHHHHHHHHHHHhh---CCCcH-HHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQY---NPQSA-EVSRKIKRVSQLAKDK 38 (233)
Q Consensus 1 me~y~dAlaafq~Alq~---npqs~-EvsrKIkrlsqL~k~k 38 (233)
+.+|++|+..|+.|++. .|.+. ..+.-.-.|..+....
T Consensus 79 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~ 120 (203)
T 3gw4_A 79 AGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHF 120 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh
Confidence 35788888888888888 45332 3333334444444433
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=76.62 E-value=11 Score=30.05 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=18.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~Ev 24 (233)
+.+|++|+..|+.|++.+|. .++
T Consensus 19 ~g~~~~A~~~~~~al~~~p~-~~~ 41 (514)
T 2gw1_A 19 NKKYDDAIKYYNWALELKED-PVF 41 (514)
T ss_dssp TSCHHHHHHHHHHHHHHCCC-HHH
T ss_pred hccHHHHHHHHHHHHhcCcc-HHH
Confidence 35799999999999999984 443
No 143
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=75.94 E-value=1.4 Score=29.45 Aligned_cols=21 Identities=14% Similarity=0.482 Sum_probs=17.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|++.+|.+
T Consensus 54 ~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 54 LDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhhhcC
Confidence 468999999999999887654
No 144
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=75.39 E-value=5.5 Score=34.12 Aligned_cols=24 Identities=21% Similarity=0.247 Sum_probs=16.1
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
++|++|+..|+.||+.||.+.++-
T Consensus 111 g~~~~Al~~~~~al~l~P~~~~a~ 134 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAANYTVW 134 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred CChHHHHHHHHHHHHhCccCHHHH
Confidence 456777777777777777766653
No 145
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=75.31 E-value=21 Score=26.00 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+|++|+..|+.|++.+|.+.+.
T Consensus 157 ~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 157 EYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHhCccchHH
Confidence 4556666666666666655443
No 146
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=74.66 E-value=7.2 Score=33.41 Aligned_cols=23 Identities=9% Similarity=0.264 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHhhCCCcHHHHH
Q 026807 4 YDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 4 y~dAlaafq~Alq~npqs~Evsr 26 (233)
|++|+..|+.|++.||.+.++-.
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~ 170 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWH 170 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHH
Confidence 77777777777777777766543
No 147
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=74.47 E-value=14 Score=29.48 Aligned_cols=22 Identities=9% Similarity=0.196 Sum_probs=19.6
Q ss_pred ChhhHHHHHHHHHHHhhCCCcH
Q 026807 1 MEQYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~ 22 (233)
|.++++|+..|+.+++.+|.+.
T Consensus 143 ~g~~~~A~~~l~~~~~~~p~~~ 164 (291)
T 3mkr_A 143 LDRLDLARKELKKMQDQDEDAT 164 (291)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCHHHHHHHHHHHHhhCcCcH
Confidence 5689999999999999999875
No 148
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=74.46 E-value=4.6 Score=31.94 Aligned_cols=22 Identities=14% Similarity=0.205 Sum_probs=18.3
Q ss_pred ChhhHHHHHHHHHHHhhCCCcH
Q 026807 1 MEQYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~ 22 (233)
+.++++|+..|+.|+..+|.+.
T Consensus 164 ~g~~~~A~~~l~~~~~~~p~~~ 185 (287)
T 3qou_A 164 LNRSEDAEAVLXTIPLQDQDTR 185 (287)
T ss_dssp TTCHHHHHHHHTTSCGGGCSHH
T ss_pred CCCHHHHHHHHHhCchhhcchH
Confidence 3578999999999999999543
No 149
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=73.94 E-value=23 Score=25.79 Aligned_cols=19 Identities=21% Similarity=0.420 Sum_probs=13.5
Q ss_pred hhhHHHHHHHHHHHhhCCC
Q 026807 2 EQYDDALSAFQTALQYNPQ 20 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npq 20 (233)
.+|++|+..|+.|+++.|+
T Consensus 97 g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 4677777777777776544
No 150
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=73.30 E-value=29 Score=26.57 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Ev 24 (233)
.+|++|+..|+.|++.+|.+.+.
T Consensus 23 g~~~~A~~~~~~al~~~~~~~~~ 45 (406)
T 3sf4_A 23 GDCRAGVSFFEAAVQVGTEDLKT 45 (406)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHH
Confidence 57999999999999999998653
No 151
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=72.57 E-value=6.7 Score=30.97 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=14.2
Q ss_pred ChhhHHHHHHHHHHHhhC
Q 026807 1 MEQYDDALSAFQTALQYN 18 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n 18 (233)
+.+|++|+..|+.|++.+
T Consensus 168 ~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 168 QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 467888888888888863
No 152
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=72.39 E-value=8 Score=30.79 Aligned_cols=16 Identities=38% Similarity=0.704 Sum_probs=12.8
Q ss_pred ChhhHHHHHHHHHHHh
Q 026807 1 MEQYDDALSAFQTALQ 16 (233)
Q Consensus 1 me~y~dAlaafq~Alq 16 (233)
+.+|++|+..|+.|++
T Consensus 237 ~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 237 QSQYEDAIPYFKRAIA 252 (383)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4578888888888888
No 153
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=71.40 E-value=4.2 Score=31.93 Aligned_cols=25 Identities=12% Similarity=0.106 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHh-hCCCcHHHHHH
Q 026807 3 QYDDALSAFQTALQ-YNPQSAEVSRK 27 (233)
Q Consensus 3 ~y~dAlaafq~Alq-~npqs~EvsrK 27 (233)
++++|+.+|+.|++ .+|.+.++-..
T Consensus 79 ~~~~A~~~~~rAl~~~~p~~~~~~~~ 104 (308)
T 2ond_A 79 FSDEAANIYERAISTLLKKNMLLYFA 104 (308)
T ss_dssp HHHHHHHHHHHHHTTTTTTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhCcccHHHHHH
Confidence 35888888888888 68888765443
No 154
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=71.06 E-value=6.7 Score=30.75 Aligned_cols=36 Identities=11% Similarity=0.215 Sum_probs=21.5
Q ss_pred ChhhHHHHHHHHHHHhhCC---CcHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNP---QSAEVSRKIKRVSQLAK 36 (233)
Q Consensus 1 me~y~dAlaafq~Alq~np---qs~EvsrKIkrlsqL~k 36 (233)
+.+|++|+..|+.|++..| .......-...|..+..
T Consensus 276 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 314 (411)
T 4a1s_A 276 LGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYT 314 (411)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4578889988888888764 33333333334444333
No 155
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=69.94 E-value=9 Score=30.59 Aligned_cols=27 Identities=22% Similarity=0.365 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.+|.+.++-..+
T Consensus 318 ~~~~~A~~~~~~~~~~~~~~~~~~~~l 344 (514)
T 2gw1_A 318 QNYDQAGKDFDKAKELDPENIFPYIQL 344 (514)
T ss_dssp TCTTHHHHHHHHHHHTCSSCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHhChhhHHHHHHH
Confidence 467777777777777777776654433
No 156
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=69.59 E-value=18 Score=25.21 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=15.1
Q ss_pred hhhHHHHHHHHHHHhh
Q 026807 2 EQYDDALSAFQTALQY 17 (233)
Q Consensus 2 e~y~dAlaafq~Alq~ 17 (233)
.+|++|+..|+.|+++
T Consensus 25 ~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTR 40 (162)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5799999999999999
No 157
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=68.87 E-value=28 Score=26.62 Aligned_cols=21 Identities=19% Similarity=0.392 Sum_probs=15.2
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|++..|+.
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhc
Confidence 356788888888888776543
No 158
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=68.35 E-value=17 Score=30.02 Aligned_cols=24 Identities=17% Similarity=0.214 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
.+|++|+..|+.+++.+|.+.+.-
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~ 410 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAW 410 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHH
Confidence 456777777777777777666543
No 159
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=66.89 E-value=5.6 Score=36.11 Aligned_cols=27 Identities=4% Similarity=-0.183 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.+|++|+..|+.|++.||.+.++-.-+
T Consensus 447 g~~~~A~~~~~~al~~~p~~~~a~~~l 473 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWRWRLVWYR 473 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCcchHHHHHHH
Confidence 468888888888888888887765443
No 160
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=65.56 E-value=22 Score=29.37 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKI 28 (233)
.++++|+..|+.+++.+|.+.++-..+
T Consensus 353 g~~~~A~~~~~~~~~~~~~~~~~~~~l 379 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDRHPEKAVTWLAV 379 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHH
Confidence 467888888888888888877654443
No 161
>1x9f_D Globin C, hemoglobin chain D1, globin III, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_D*
Probab=63.67 E-value=22 Score=26.17 Aligned_cols=17 Identities=12% Similarity=0.335 Sum_probs=8.9
Q ss_pred HHHHHHHHHhhCCCcHH
Q 026807 7 ALSAFQTALQYNPQSAE 23 (233)
Q Consensus 7 Alaafq~Alq~npqs~E 23 (233)
+...|...+..+|+...
T Consensus 28 g~~~~~~lF~~~P~~k~ 44 (140)
T 1x9f_D 28 GLELWRDIIDDHPEIKA 44 (140)
T ss_dssp HHHHHHHHHHHCGGGGG
T ss_pred HHHHHHHHHHhChhHHH
Confidence 34455666655554443
No 162
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=63.06 E-value=8.6 Score=34.19 Aligned_cols=47 Identities=17% Similarity=0.134 Sum_probs=40.1
Q ss_pred ChhhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026807 1 MEQYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQEVENI 47 (233)
Q Consensus 1 me~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~even~ 47 (233)
+.+|++|+..|+.||+. -|.+.+|+.-.-.|..+...+-+..|-+.|
T Consensus 353 ~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~ 404 (433)
T 3qww_A 353 MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKA 404 (433)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 46899999999999964 599999999999999999988887765553
No 163
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=62.27 E-value=28 Score=22.34 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=17.3
Q ss_pred hhhHHHHHHHHHHHhhCCCcH
Q 026807 2 EQYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~ 22 (233)
.+|++|+..|+.|+++.+...
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~ 43 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFG 43 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHhC
Confidence 579999999999999875443
No 164
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=59.97 E-value=32 Score=26.84 Aligned_cols=18 Identities=22% Similarity=0.302 Sum_probs=14.0
Q ss_pred hhhHHHHHHHHHHHhhCC
Q 026807 2 EQYDDALSAFQTALQYNP 19 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np 19 (233)
.+|++|+..|+.|++.++
T Consensus 51 g~~~~A~~~~~~al~~~~ 68 (292)
T 1qqe_A 51 KELNLAGDSFLKAADYQK 68 (292)
T ss_dssp TCTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 468888888888888753
No 165
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=59.39 E-value=64 Score=25.52 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHhh---CCCcHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQY---NPQSAEVSRKIKRVSQLAKD 37 (233)
Q Consensus 2 e~y~dAlaafq~Alq~---npqs~EvsrKIkrlsqL~k~ 37 (233)
.+|++|+..|+.|++. .|...+.+.-.-.|+.+...
T Consensus 117 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~ 155 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY 155 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH
Confidence 4789999999999887 45555555544555544433
No 166
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=59.23 E-value=34 Score=28.86 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=22.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.++++|..+|+.|++.+|.+.++=.+.-
T Consensus 26 ~~~~~a~~~~e~al~~~P~~~~~w~~~~ 53 (530)
T 2ooe_A 26 QPIDKARKTYERLVAQFPSSGRFWKLYI 53 (530)
T ss_dssp SCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 4688999999999999999987755443
No 167
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=56.89 E-value=53 Score=25.76 Aligned_cols=18 Identities=11% Similarity=0.102 Sum_probs=13.6
Q ss_pred hhhHHHHHHHHHHHhhCC
Q 026807 2 EQYDDALSAFQTALQYNP 19 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np 19 (233)
.+|++|+..|+.|+++.+
T Consensus 90 g~~~~A~~~~~~Al~l~~ 107 (307)
T 2ifu_A 90 QRMPEAVQYIEKASVMYV 107 (307)
T ss_dssp TCGGGGHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 467888888888887753
No 168
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=56.43 E-value=17 Score=25.33 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 026807 4 YDDALSAFQTALQYNPQSAEVSRKIKR 30 (233)
Q Consensus 4 y~dAlaafq~Alq~npqs~EvsrKIkr 30 (233)
.++|...|+.||+.+|++.....-+-.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~ 51 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIAN 51 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 589999999999999999877665533
No 169
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=54.49 E-value=7.2 Score=26.03 Aligned_cols=17 Identities=35% Similarity=0.696 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHhhC
Q 026807 2 EQYDDALSAFQTALQYN 18 (233)
Q Consensus 2 e~y~dAlaafq~Alq~n 18 (233)
+-||.|.++|+.||+.+
T Consensus 16 KayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 16 KAYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 35999999999999865
No 170
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=53.16 E-value=26 Score=25.93 Aligned_cols=17 Identities=12% Similarity=0.298 Sum_probs=9.1
Q ss_pred HHHHHHHHHhhCCCcHH
Q 026807 7 ALSAFQTALQYNPQSAE 23 (233)
Q Consensus 7 Alaafq~Alq~npqs~E 23 (233)
+...|...+..+|+...
T Consensus 30 g~~~y~rlF~~~P~~k~ 46 (145)
T 1x9f_B 30 SQAIWRATFAQVPESRS 46 (145)
T ss_dssp HHHHHHHHHHHCGGGGG
T ss_pred HHHHHHHHHHhChHHHH
Confidence 44556666666654443
No 171
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=52.89 E-value=44 Score=25.47 Aligned_cols=27 Identities=30% Similarity=0.667 Sum_probs=14.5
Q ss_pred hhHHHHHHHHHHH-------hhCCCcHHHHHHHH
Q 026807 3 QYDDALSAFQTAL-------QYNPQSAEVSRKIK 29 (233)
Q Consensus 3 ~y~dAlaafq~Al-------q~npqs~EvsrKIk 29 (233)
+|++||..|+.|+ ++-|++.+.-.+|+
T Consensus 33 ~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr 66 (117)
T 2cpt_A 33 NYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIR 66 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 4556655555554 44556665544443
No 172
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=51.73 E-value=53 Score=22.24 Aligned_cols=18 Identities=17% Similarity=0.056 Sum_probs=15.9
Q ss_pred ChhhHHHHHHHHHHHhhC
Q 026807 1 MEQYDDALSAFQTALQYN 18 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n 18 (233)
+..|+.|+.-|+.|++..
T Consensus 18 ~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 18 EADYYHTELWMEQALRQL 35 (104)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhh
Confidence 468999999999999975
No 173
>1b0b_A Hemoglobin; hemoprotein, sulfide carrier, globins, oxygen transport, oxygen storage/transport complex; HET: HEM; 1.43A {Lucina pectinata} SCOP: a.1.1.2 PDB: 1ebt_A* 1flp_A* 1moh_A*
Probab=51.10 E-value=59 Score=23.77 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=20.9
Q ss_pred HHHHHhhcchhhhhHhHHHHHHHHHHH
Q 026807 62 SEMSEKYGAEECWKHVFSFVVETMETA 88 (233)
Q Consensus 62 ~em~~~~G~~e~~k~~fsF~ve~~e~A 88 (233)
.-|++.+|+.+.|.+.|.++.++|...
T Consensus 115 ~~l~~~lg~~~AW~~~~~~v~~~l~~~ 141 (142)
T 1b0b_A 115 GFMKSYGGDEGAWTAVAGALMGMIRPD 141 (142)
T ss_dssp HHGGGGTCCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHhcc
Confidence 334566787899999999999888654
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=50.68 E-value=59 Score=22.44 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=14.6
Q ss_pred hhhHHHHHHHHHHHhhC
Q 026807 2 EQYDDALSAFQTALQYN 18 (233)
Q Consensus 2 e~y~dAlaafq~Alq~n 18 (233)
.+|++|+..|+.|++..
T Consensus 121 g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 121 GDLAGARQEYEKSLVYA 137 (203)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 57899999999999774
No 175
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=50.63 E-value=51 Score=29.89 Aligned_cols=28 Identities=18% Similarity=0.039 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHHHH--------hhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTAL--------QYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Al--------q~npqs~EvsrKIk 29 (233)
.+|++|+..|+.|+ +.+|.+.++-..+-
T Consensus 405 ~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a 440 (681)
T 2pzi_A 405 SQPVQTLDSLRAARHGALDADGVDFSESVELPLMEV 440 (681)
T ss_dssp CCHHHHHHHHHHHHTC-------CCTTCSHHHHHHH
T ss_pred cCHHHHHHHHHHhhhhcccccccccccchhHHHHHH
Confidence 57999999999999 99999998755443
No 176
>1oks_A RNA polymerase alpha subunit; transferase, RNA-directed RNA polymerase, nucleocapsid, phosphorylation.; HET: NHE; 1.8A {Measles virus} SCOP: a.8.5.1 PDB: 1t6o_A 2k9d_A
Probab=50.44 E-value=11 Score=27.06 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=33.9
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHH
Q 026807 20 QSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKS 62 (233)
Q Consensus 20 qs~EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~L~~lk~ 62 (233)
.|.+|+|.|=+=|.|-.+.||-. ..|..||--+++|.+|-.
T Consensus 2 ~SrsViRSvikSS~l~~~hK~~m--l~LL~dikg~~dL~eF~q 42 (56)
T 1oks_A 2 ASRSVIRSIIKSSRLEEDRKRYL--MTLLDDIKGANDLAKFHQ 42 (56)
T ss_dssp CCHHHHHHHHHHSCSCHHHHHHH--HHHHHHCCSHHHHHHHHH
T ss_pred ccHHHHHHHHHhcccchHHHHHH--HHHHHHccccchHHHHHH
Confidence 58899999999999988888765 777778888888888754
No 177
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=50.22 E-value=45 Score=29.98 Aligned_cols=47 Identities=13% Similarity=0.298 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHhhCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026807 2 EQYDDALSAFQTALQYNP----QSAEVSRKIKRVSQLAKDKKRAQEVENIR 48 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np----qs~EvsrKIkrlsqL~k~kkra~even~r 48 (233)
-+++||+..|+.+|..-| .+.+=...+|.|-.+.|+=..+.-+|--|
T Consensus 116 gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~R 166 (320)
T 3mkr_B 116 GKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETER 166 (320)
T ss_dssp TCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999999999875 44444456777776666655555444433
No 178
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=49.94 E-value=51 Score=24.08 Aligned_cols=18 Identities=6% Similarity=0.429 Sum_probs=11.7
Q ss_pred hhhhHhHHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETAV 89 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~Av 89 (233)
+.|...|.++.++|-.++
T Consensus 128 ~AW~~~~~~v~~~l~~~~ 145 (147)
T 1jf3_A 128 DAWAAAYGDISGALISGL 145 (147)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 556777777766666554
No 179
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=49.11 E-value=16 Score=32.11 Aligned_cols=45 Identities=9% Similarity=0.028 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQEVEN 46 (233)
Q Consensus 2 e~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~even 46 (233)
.+|++|+..|+.||+. -|....|+.-.-.|..+...+-+-.|-+.
T Consensus 343 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~ 392 (429)
T 3qwp_A 343 GLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMK 392 (429)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 5899999999999964 59999999999999999988877765444
No 180
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=48.93 E-value=28 Score=26.11 Aligned_cols=18 Identities=11% Similarity=0.410 Sum_probs=12.5
Q ss_pred hhhhHhHHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETAV 89 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~Av 89 (233)
+.|.+.|.++.++|-.++
T Consensus 134 ~AW~~~~~~ia~~l~~~~ 151 (153)
T 1x9f_C 134 LAWKSCLKGILTKISSRL 151 (153)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 667777777777776655
No 181
>3b5n_C Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=48.66 E-value=54 Score=23.39 Aligned_cols=56 Identities=11% Similarity=0.241 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhHHH-HhHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRS----NVDMV-QHLDEFKS 62 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra~even~rs----nvd~a-k~L~~lk~ 62 (233)
++.+++=+.+|+..-++.++.++ +|..|.....+..-+|...- +...| +||.+||+
T Consensus 8 ~esl~STrr~L~~a~e~e~~g~~--Tl~~L~~QgEqL~rtE~~ld~i~~~~k~aek~l~~Lk~ 68 (70)
T 3b5n_C 8 QSSVASTRNTLKMAQDAERAGMN--TLGMLGHQSEQLNNVEGNLDLMKVQNKVADEKVAELKK 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 56788888889888888888754 88888877666554444222 22222 55666664
No 182
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=47.68 E-value=76 Score=24.98 Aligned_cols=64 Identities=14% Similarity=0.229 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh-HHHHHHHHHHhhcc--hhhhhHhHHHHHHHHHHHH
Q 026807 22 AEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQH-LDEFKSEMSEKYGA--EECWKHVFSFVVETMETAV 89 (233)
Q Consensus 22 ~EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~-L~~lk~em~~~~G~--~e~~k~~fsF~ve~~e~Av 89 (233)
..+...+++|++.|..+ +.-.-++..- ++.+ |..|+.-+-..|.. .+.|.+.|.++.++|..+.
T Consensus 103 ~~l~~~l~~L~~~H~~~-~gV~p~~f~~---~~~~Ll~~l~~~lg~~~t~e~~~AW~k~~~~va~~l~~~y 169 (193)
T 2dc3_A 103 DKVSSVLALVGKAHALK-HKVEPVYFKI---LSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAY 169 (193)
T ss_dssp HHHHHHHHHHHHHHHHT-SCCCHHHHHH---HHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHH---HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666777777777642 1111122111 2222 44444433323322 3589999999999998776
No 183
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=47.33 E-value=19 Score=26.92 Aligned_cols=18 Identities=17% Similarity=0.573 Sum_probs=12.8
Q ss_pred hhhhHhHHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETAV 89 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~Av 89 (233)
|.|.+.|.++.++|-.++
T Consensus 130 ~AW~~~~~~ia~~l~~~~ 147 (149)
T 1yhu_D 130 DAWSRCFNRITTGMTEPL 147 (149)
T ss_dssp HHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 678888877777776554
No 184
>2zs0_B Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_B* 2d2m_B* 2zfo_B* 2zs1_B*
Probab=47.02 E-value=39 Score=24.91 Aligned_cols=14 Identities=14% Similarity=0.620 Sum_probs=7.9
Q ss_pred hhhhHhHHHHHHHH
Q 026807 72 ECWKHVFSFVVETM 85 (233)
Q Consensus 72 e~~k~~fsF~ve~~ 85 (233)
|.|.+.|.++.++|
T Consensus 127 ~AW~~~~~~ia~~l 140 (142)
T 2zs0_B 127 DAWNSCMNQIVSGI 140 (142)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 45666665555544
No 185
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=46.43 E-value=23 Score=31.96 Aligned_cols=44 Identities=9% Similarity=0.106 Sum_probs=36.6
Q ss_pred ChhhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQEV 44 (233)
Q Consensus 1 me~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~ev 44 (233)
+.+|++|+..|+.||+. -|....|+.-.-.|..+...+-+-.|-
T Consensus 364 ~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA 412 (490)
T 3n71_A 364 LQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVG 412 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHH
Confidence 35899999999999975 499999999999999998877665553
No 186
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=46.24 E-value=56 Score=20.90 Aligned_cols=21 Identities=14% Similarity=0.302 Sum_probs=17.1
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|+++.++.
T Consensus 62 ~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 62 LGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHh
Confidence 467999999999999886543
No 187
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=45.27 E-value=54 Score=28.43 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=10.6
Q ss_pred HHHHHHHHhhcchh
Q 026807 59 EFKSEMSEKYGAEE 72 (233)
Q Consensus 59 ~lk~em~~~~G~~e 72 (233)
..+-+||++||..+
T Consensus 766 ~~A~~lA~~~~~~~ 779 (814)
T 3mkq_A 766 SEAAFLGSTYGLGD 779 (814)
T ss_dssp HHHHHHHHHTTCCH
T ss_pred HHHHHHHHHhCCCh
Confidence 45667889999776
No 188
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=45.26 E-value=1e+02 Score=23.67 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=18.8
Q ss_pred ChhhHHHHHHHHHHH---hhCCCcHHHH
Q 026807 1 MEQYDDALSAFQTAL---QYNPQSAEVS 25 (233)
Q Consensus 1 me~y~dAlaafq~Al---q~npqs~Evs 25 (233)
+.+|++|+..|+.|+ +.+|.+..+.
T Consensus 168 ~~~~~~A~~~~~kal~~~~~~~~~~~~~ 195 (293)
T 2qfc_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCccccch
Confidence 467999999999999 5567665544
No 189
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=44.77 E-value=37 Score=30.70 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHHHHhhCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026807 2 EQYDDALSAFQTALQYNP----QSAEVSRKIKRVSQLAKDKKRAQEVENIR 48 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np----qs~EvsrKIkrlsqL~k~kkra~even~r 48 (233)
-+++||+..|+.+|..=| .|.+-...+|.|-.+.|+=..+.-+|.-|
T Consensus 128 gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~R 178 (325)
T 3mv2_A 128 NKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELER 178 (325)
T ss_dssp TCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999999998754 44444456677766666655555555444
No 190
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=44.29 E-value=78 Score=23.15 Aligned_cols=17 Identities=18% Similarity=0.845 Sum_probs=12.3
Q ss_pred hhhhHhHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETA 88 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~A 88 (233)
+.|...|.++.++|-.+
T Consensus 129 ~AW~~~~~~va~~l~~~ 145 (147)
T 1mba_A 129 AAWTKLFGLIIDALKAA 145 (147)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 66888888777777543
No 191
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=44.24 E-value=30 Score=25.55 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=9.4
Q ss_pred HHHHHHHHHhhCCCcHHH
Q 026807 7 ALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 7 Alaafq~Alq~npqs~Ev 24 (233)
+...|...+..+|+....
T Consensus 28 g~~~y~rlF~~~P~~k~~ 45 (140)
T 2zs0_A 28 SRDLFSELFNIQGSSRAL 45 (140)
T ss_dssp HHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHHHHHCHHHHHh
Confidence 345566666665554433
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=44.01 E-value=43 Score=30.22 Aligned_cols=46 Identities=9% Similarity=-0.023 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026807 2 EQYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQEVENI 47 (233)
Q Consensus 2 e~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~even~ 47 (233)
.+|++|+..|+.||.. -|....++.-..-|.|...+..+-++-|.|
T Consensus 407 G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~ 457 (490)
T 3n71_A 407 GHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFM 457 (490)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999974 477777777666677766666555554443
No 193
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=43.14 E-value=20 Score=27.76 Aligned_cols=21 Identities=14% Similarity=0.311 Sum_probs=17.0
Q ss_pred ChhhHHHHHHHHHHHhhCCCc
Q 026807 1 MEQYDDALSAFQTALQYNPQS 21 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs 21 (233)
+.+|++|+..|+.|++.+++.
T Consensus 209 ~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 209 DSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHHc
Confidence 468999999999999877544
No 194
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=42.89 E-value=79 Score=22.78 Aligned_cols=14 Identities=29% Similarity=0.650 Sum_probs=8.2
Q ss_pred hhHHHHHHHHHHHh
Q 026807 3 QYDDALSAFQTALQ 16 (233)
Q Consensus 3 ~y~dAlaafq~Alq 16 (233)
+|++|+..|+.|++
T Consensus 31 ~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 31 RYPQALVCYQEGID 44 (86)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 46666666665554
No 195
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=42.34 E-value=37 Score=28.55 Aligned_cols=19 Identities=16% Similarity=0.457 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHHHHhhCCC
Q 026807 2 EQYDDALSAFQTALQYNPQ 20 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npq 20 (233)
.+|++|+..|+.||++.|.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~ 255 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEG 255 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhc
Confidence 5799999999999995543
No 196
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=42.04 E-value=32 Score=25.63 Aligned_cols=16 Identities=13% Similarity=0.617 Sum_probs=10.5
Q ss_pred hhhhHhHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMET 87 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~ 87 (233)
|.|.+.|.++.++|-.
T Consensus 130 eAW~~~~~~i~~~l~~ 145 (147)
T 2zs0_C 130 DSWNRCFARIANGISA 145 (147)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677777776666644
No 197
>3hme_A Bromodomain-containing protein 9; BRD9, bromodomain containing 9 isoform 1, LAVS3040, rhabdomyosarcoma antigen MU-RMS-40.8; 2.23A {Homo sapiens}
Probab=41.99 E-value=59 Score=24.24 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRS 49 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra~even~rs 49 (233)
.|-.-.|.-|..||+.++++.+--++|.+.....-+...+.++..
T Consensus 76 ~D~~li~~Na~~yN~~~s~~~~~A~~L~~~~~~~~~~~~~~~l~~ 120 (123)
T 3hme_A 76 ADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKR 120 (123)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456667999999999999999888888877766655555555443
No 198
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=41.78 E-value=1.3e+02 Score=23.87 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=12.7
Q ss_pred hhhHHHHHHHHHHHhhCCC
Q 026807 2 EQYDDALSAFQTALQYNPQ 20 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npq 20 (233)
.+|++|+..|+.|++..++
T Consensus 155 ~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 155 KQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHh
Confidence 4667777777777766543
No 199
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=41.40 E-value=1.6e+02 Score=26.12 Aligned_cols=85 Identities=6% Similarity=-0.006 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-------hh------hhHHHHhHHHHHHHH
Q 026807 3 QYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQEVENI-------RS------NVDMVQHLDEFKSEM 64 (233)
Q Consensus 3 ~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~even~-------rs------nvd~ak~L~~lk~em 64 (233)
+|++|+..|+.||+. -|.+..|++-...|..+-.++-+-.|-+.| +. ..++|..|+.|..-.
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 392 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY 392 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 699999999999985 489999999999998888776555542222 11 245666666666543
Q ss_pred HHhhcchhhhhHhHHHHHHHHHHH
Q 026807 65 SEKYGAEECWKHVFSFVVETMETA 88 (233)
Q Consensus 65 ~~~~G~~e~~k~~fsF~ve~~e~A 88 (233)
. .-|..+--..+|.=..+.++..
T Consensus 393 ~-~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 393 M-GLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHH
T ss_pred H-hccCHHHHHHHHHHHHHHHHHH
Confidence 2 1233333334444333444433
No 200
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=40.77 E-value=22 Score=26.60 Aligned_cols=18 Identities=11% Similarity=0.300 Sum_probs=10.6
Q ss_pred HHHHHHHHHhhCCCcHHH
Q 026807 7 ALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 7 Alaafq~Alq~npqs~Ev 24 (233)
+...|...+..+|+....
T Consensus 33 g~~~y~rlF~~~P~~k~~ 50 (148)
T 1yhu_C 33 GEEVFAALFKMVPAAKNL 50 (148)
T ss_dssp HHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHHHHHChhHHHh
Confidence 455666667666654443
No 201
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=40.57 E-value=62 Score=23.88 Aligned_cols=18 Identities=11% Similarity=0.386 Sum_probs=13.8
Q ss_pred hhhhhHhHHHHHHHHHHH
Q 026807 71 EECWKHVFSFVVETMETA 88 (233)
Q Consensus 71 ~e~~k~~fsF~ve~~e~A 88 (233)
.+.|.+.|.++.++|-.+
T Consensus 132 ~~AW~~~~~~i~~~l~~~ 149 (150)
T 1x46_A 132 KKAWDSAFNNMYSVVFPE 149 (150)
T ss_dssp HHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 467888888888887654
No 202
>1yhu_A Hemoglobin A1 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=40.37 E-value=50 Score=24.66 Aligned_cols=15 Identities=7% Similarity=0.600 Sum_probs=8.9
Q ss_pred hhhhHhHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETME 86 (233)
Q Consensus 72 e~~k~~fsF~ve~~e 86 (233)
+-|.+.|..+.++|.
T Consensus 126 ~AW~~~~~~va~~l~ 140 (145)
T 1yhu_A 126 PAWQGCYNIIAKGIT 140 (145)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 566666666655553
No 203
>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...
Probab=40.21 E-value=31 Score=25.04 Aligned_cols=12 Identities=25% Similarity=0.230 Sum_probs=9.3
Q ss_pred HHHHHHHHhhcc
Q 026807 59 EFKSEMSEKYGA 70 (233)
Q Consensus 59 ~lk~em~~~~G~ 70 (233)
.+|++|-++||.
T Consensus 41 ~IK~~fD~kyg~ 52 (89)
T 3rjs_A 41 FIKKEFDRKHNP 52 (89)
T ss_dssp HHHHHHHHHHCS
T ss_pred HHHHHHhcccCC
Confidence 457788888985
No 204
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=40.08 E-value=41 Score=26.24 Aligned_cols=15 Identities=33% Similarity=0.733 Sum_probs=12.5
Q ss_pred hhHHHHHHHHHHHhh
Q 026807 3 QYDDALSAFQTALQY 17 (233)
Q Consensus 3 ~y~dAlaafq~Alq~ 17 (233)
+|||||...++|+.|
T Consensus 30 kydeAIech~kAa~y 44 (97)
T 2crb_A 30 KYEEAISCHRKATTY 44 (97)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 799999988888754
No 205
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=38.66 E-value=16 Score=26.08 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHhhCC
Q 026807 4 YDDALSAFQTALQYNP 19 (233)
Q Consensus 4 y~dAlaafq~Alq~np 19 (233)
|.+||..|..|+++.|
T Consensus 34 Y~~aie~l~~~lk~e~ 49 (83)
T 2v6y_A 34 YKKAIEVLSQIIVLYP 49 (83)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4555555555555554
No 206
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=38.30 E-value=33 Score=25.46 Aligned_cols=12 Identities=33% Similarity=0.659 Sum_probs=9.1
Q ss_pred HHHHHHHHhhcc
Q 026807 59 EFKSEMSEKYGA 70 (233)
Q Consensus 59 ~lk~em~~~~G~ 70 (233)
.+|++|-++||.
T Consensus 49 ~IK~~fDkkyG~ 60 (97)
T 4ds1_A 49 TVKKQLDVKYGN 60 (97)
T ss_dssp HHHHHHHHHHCS
T ss_pred HHHHHHhCccCC
Confidence 467788888986
No 207
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=38.09 E-value=17 Score=26.40 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=18.4
Q ss_pred hhhHHHHHHHHHHHhhCCCcH
Q 026807 2 EQYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~ 22 (233)
.-|.+|+..|..|+++.|++.
T Consensus 37 ~lY~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 37 VCYQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHhhCCCHH
Confidence 469999999999999988764
No 208
>2zs0_D Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2zfo_D* 2zs1_D* 2d2m_D* 2d2n_D*
Probab=37.84 E-value=48 Score=25.13 Aligned_cols=17 Identities=6% Similarity=0.436 Sum_probs=10.7
Q ss_pred chhhhhHhHHHHHHHHH
Q 026807 70 AEECWKHVFSFVVETME 86 (233)
Q Consensus 70 ~~e~~k~~fsF~ve~~e 86 (233)
+.+.|.+.|..+..+|.
T Consensus 126 t~~AW~k~~~~v~~~l~ 142 (145)
T 2zs0_D 126 HIDAWGYCMAYIAAGIG 142 (145)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 34677777766666654
No 209
>1x9f_A Globin IV, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_A*
Probab=37.59 E-value=40 Score=25.34 Aligned_cols=17 Identities=18% Similarity=0.583 Sum_probs=9.9
Q ss_pred hhhhHhHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETA 88 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~A 88 (233)
|.|.+.|..+.++|-.+
T Consensus 133 eAW~k~~~~va~~l~~~ 149 (151)
T 1x9f_A 133 DAWNRCFHRLVARIAKD 149 (151)
T ss_dssp HHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 36666666666665443
No 210
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=37.23 E-value=18 Score=26.18 Aligned_cols=16 Identities=13% Similarity=0.306 Sum_probs=7.9
Q ss_pred hHHHHHHHHHHHhhCC
Q 026807 4 YDDALSAFQTALQYNP 19 (233)
Q Consensus 4 y~dAlaafq~Alq~np 19 (233)
|.+||..|..|+++.|
T Consensus 42 Y~~aie~l~~alk~e~ 57 (83)
T 2w2u_A 42 YKKAIEVLAQLVSLYR 57 (83)
T ss_dssp HHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4444445555555543
No 211
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2 PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Probab=36.92 E-value=72 Score=23.14 Aligned_cols=61 Identities=11% Similarity=0.273 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh--HHHHHHHHHHhhcc--hhhhhHhHHHHHHHHHHHH
Q 026807 23 EVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQH--LDEFKSEMSEKYGA--EECWKHVFSFVVETMETAV 89 (233)
Q Consensus 23 EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~--L~~lk~em~~~~G~--~e~~k~~fsF~ve~~e~Av 89 (233)
.+...+++|++.|+. +--. ..|.+..++ |..|+.-+...+.. .+.|...|.++.++|..+-
T Consensus 84 ~l~~~l~~l~~~H~~--~gV~----p~~f~~~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~v~~~m~~~y 148 (151)
T 1q1f_A 84 SLEEYLTSLGRKHRA--VGVR----LSSFSTVGESLLYMLEKSLGPDFTPATRTAWSRLYGAVVQAMSRGW 148 (151)
T ss_dssp SSHHHHHHHHHHHHH--HTCC----TTHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHH--CCCC----HHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 355667777777654 1111 223333322 55555554444433 2789999999999987765
No 212
>2w72_B Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7w_B* 1qi8_B* 1j7y_B* 1dxu_B* 1a0u_B* 1a0z_B* 1gli_B* 1j7s_B* 1o1l_B* 1o1n_B* 1y0t_B* 1y0w_B* 1o1o_B* 1ye2_B* 1y35_B* 1y22_B* 1ye0_B* 1dxt_B* 1y5f_B* 1ird_B* ...
Probab=36.45 E-value=82 Score=23.32 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH-Hh-HHHHHHHHHHhhcc--hhhhhHhHHHHHHHHHH
Q 026807 24 VSRKIKRVSQLAKDKKRAQEVENIRSNVDMV-QH-LDEFKSEMSEKYGA--EECWKHVFSFVVETMET 87 (233)
Q Consensus 24 vsrKIkrlsqL~k~kkra~even~rsnvd~a-k~-L~~lk~em~~~~G~--~e~~k~~fsF~ve~~e~ 87 (233)
+...+++|++.|+.+ +.-.-+ |.+.. .+ |..|+.-+-..|.. .+.|.+.|.++.++|..
T Consensus 81 l~~~l~~L~~~H~~k-~~V~p~----~f~~~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~l~~ 143 (146)
T 2w72_B 81 LKGTFATLSELHCDK-LHVDPE----NFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAH 143 (146)
T ss_dssp HHHHHHHHHHHHHHT-SCCCTH----HHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhc-cCCChH----HHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 555666666666551 211112 22222 22 44444444333433 26788888888877753
No 213
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=36.35 E-value=20 Score=30.32 Aligned_cols=22 Identities=9% Similarity=0.030 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
..++||..+..||+.||....+
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~ta 69 (306)
T 3dra_A 48 YSERALHITELGINELASHYTI 69 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHHCcHHHHH
Confidence 3456666666666666666555
No 214
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=36.18 E-value=31 Score=29.57 Aligned_cols=18 Identities=11% Similarity=0.135 Sum_probs=13.2
Q ss_pred ChhhHHHHHHHHHHHhhC
Q 026807 1 MEQYDDALSAFQTALQYN 18 (233)
Q Consensus 1 me~y~dAlaafq~Alq~n 18 (233)
+.++++|++.|+.|+.-+
T Consensus 184 LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSP 201 (282)
T ss_dssp TTCHHHHHHHHHHHHTST
T ss_pred CCCHHHHHHHHHHHhcCC
Confidence 357788888888887555
No 215
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=36.16 E-value=20 Score=30.36 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Evsr 26 (233)
+|++||..+..+|+.||.+..+=-
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~ 107 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWN 107 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHCcccHHHHH
Confidence 799999999999999999988743
No 216
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=35.94 E-value=55 Score=23.91 Aligned_cols=17 Identities=12% Similarity=0.249 Sum_probs=10.0
Q ss_pred HHHHHHHHHhhCCCcHH
Q 026807 7 ALSAFQTALQYNPQSAE 23 (233)
Q Consensus 7 Alaafq~Alq~npqs~E 23 (233)
+...|...+..+|+...
T Consensus 30 g~~~~~~lF~~~P~~k~ 46 (144)
T 1yhu_B 30 GHFIWSHVFQHSPAARD 46 (144)
T ss_dssp HHHHHHHHHHHCGGGGG
T ss_pred HHHHHHHHHHHChHHHH
Confidence 45566666666665443
No 217
>3ubc_A Hemoglobin-like flavoprotein; oxygen-bound, autoxidation, nanotemplate, langmuir-blodgett, films, oxygen transport; HET: HEM; 1.65A {Methylacidiphilum infernorum V4} PDB: 3ubv_A* 3s1i_A* 3s1j_A*
Probab=35.34 E-value=72 Score=22.90 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=11.0
Q ss_pred HHHHHHHHHhhCCCcHH
Q 026807 7 ALSAFQTALQYNPQSAE 23 (233)
Q Consensus 7 Alaafq~Alq~npqs~E 23 (233)
+...|...+..+|+...
T Consensus 24 g~~fy~rlf~~~P~~k~ 40 (131)
T 3ubc_A 24 GLLFYANLFKEEPTVSV 40 (131)
T ss_dssp HHHHHHHHHHHCGGGGG
T ss_pred HHHHHHHHHHhChHHHH
Confidence 34567777777776544
No 218
>2nrk_A Hypothetical protein GRPB; UPF0157, PFAM04229, glutamate-rich protein, enterococcus FAE PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis} SCOP: d.218.1.14
Probab=35.13 E-value=43 Score=26.77 Aligned_cols=46 Identities=13% Similarity=0.241 Sum_probs=34.0
Q ss_pred HHhhhhhHHHHhHHHHHHHHHHhhcch-hhh-hHhHHHHHHHHHHHHh
Q 026807 45 ENIRSNVDMVQHLDEFKSEMSEKYGAE-ECW-KHVFSFVVETMETAVK 90 (233)
Q Consensus 45 en~rsnvd~ak~L~~lk~em~~~~G~~-e~~-k~~fsF~ve~~e~Avk 90 (233)
.-||+|-+.+..++.||.+++.+|.+- +.. ..==.|+.++++.|.+
T Consensus 122 DyLr~~p~~~~~Y~~lK~~la~~~~~d~~~Y~~~K~~fi~~i~~~a~~ 169 (173)
T 2nrk_A 122 NYLRENPAIATTYGTLKKQLAQAHPDSIDKYMDGKDAFIKKIEKEALK 169 (173)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTCSSCHHHHC--CHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999997642 111 1112578888888865
No 219
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=34.99 E-value=19 Score=27.50 Aligned_cols=13 Identities=23% Similarity=0.202 Sum_probs=6.0
Q ss_pred hHHHHHHHHHHHh
Q 026807 4 YDDALSAFQTALQ 16 (233)
Q Consensus 4 y~dAlaafq~Alq 16 (233)
++.|+...+.|++
T Consensus 15 l~kAi~lv~~Ave 27 (117)
T 2cpt_A 15 LQKAIDLASKAAQ 27 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555554444433
No 220
>2lxl_A Vacuolar protein sorting-associated protein VTA1; MIT, protein transport; NMR {Homo sapiens} PDB: 2lxm_A
Probab=34.83 E-value=52 Score=27.00 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=35.2
Q ss_pred HHHHHHHhhCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHH
Q 026807 9 SAFQTALQYNPQSAEVSR-KIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSE 63 (233)
Q Consensus 9 aafq~Alq~npqs~Evsr-KIkrlsqL~k~kkra~even~rsnvd~ak~L~~lk~e 63 (233)
=|+|.+++..+.+.|+.. ++.=|.+|-++|++...-+.+...+.-..+++.|.-.
T Consensus 41 yA~e~~l~l~~~~~e~~~f~~~LLd~LE~~K~~~~~~dai~~~~~~~ayve~fAlk 96 (183)
T 2lxl_A 41 YAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALK 96 (183)
T ss_dssp HHHHHHHHHCSCCTTHHHHHHHHHHHHHHHHHHHCSCHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCChhHHHHHHHHHHHHHHHHHhccchhHHhhHHHHHHHHHHHHHH
Confidence 468999999999998854 5566778888877765433322223333455555544
No 221
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=33.74 E-value=1.4e+02 Score=22.04 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=8.4
Q ss_pred hhHHHHHHHHHHHhhC
Q 026807 3 QYDDALSAFQTALQYN 18 (233)
Q Consensus 3 ~y~dAlaafq~Alq~n 18 (233)
+|++|+..|+.|++.+
T Consensus 57 ~~~~A~~~~~~a~~~~ 72 (273)
T 1ouv_A 57 NLKKAASFYAKACDLN 72 (273)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCC
Confidence 4555555555555554
No 222
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=32.61 E-value=23 Score=25.79 Aligned_cols=19 Identities=16% Similarity=0.377 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHhhCCCcH
Q 026807 4 YDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 4 y~dAlaafq~Alq~npqs~ 22 (233)
|.+|+..|..|+++.|+..
T Consensus 38 Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 38 YQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHCCCHH
Confidence 5555555556666665544
No 223
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=31.38 E-value=1.9e+02 Score=26.70 Aligned_cols=70 Identities=23% Similarity=0.290 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHHHhhC------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH----HhHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYN------------PQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMV----QHLDEFKSEMS 65 (233)
Q Consensus 2 e~y~dAlaafq~Alq~n------------pqs~EvsrKIkrlsqL~k~kkra~even~rsnvd~a----k~L~~lk~em~ 65 (233)
++.-+||+.++.|++.. |.|.|+--==.-|.+|+-.--+|+-+.| .--+|=| .-|.+++++--
T Consensus 67 ~~~~~~l~~mr~aa~daqk~~p~kl~~k~~ds~E~kd~~~Gl~~li~qiD~a~~la~-~g~l~eAkk~a~~~~~~r~~yH 145 (347)
T 3u8p_A 67 AQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN-EGKVKEAQAAAEQLKTTRNAYH 145 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCGGGTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccccccCCCchHHHHHHHHHHHHHHHhhHHHHhhh-ccchHHHHHHHHHhHhHHHhhh
Confidence 45678999999999874 7899997666777777777777765444 2234444 33666777766
Q ss_pred Hhh--cchh
Q 026807 66 EKY--GAEE 72 (233)
Q Consensus 66 ~~~--G~~e 72 (233)
.|| |+.|
T Consensus 146 k~~~~G~~~ 154 (347)
T 3u8p_A 146 QKYRGGKLT 154 (347)
T ss_dssp HHHSSSCEE
T ss_pred hhccCCceE
Confidence 666 4444
No 224
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=31.33 E-value=1.6e+02 Score=21.70 Aligned_cols=77 Identities=10% Similarity=0.271 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh-HHHHHHHHHHhhcc--hhhhhHhHHHHHHH
Q 026807 8 LSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQH-LDEFKSEMSEKYGA--EECWKHVFSFVVET 84 (233)
Q Consensus 8 laafq~Alq~npqs~EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~-L~~lk~em~~~~G~--~e~~k~~fsF~ve~ 84 (233)
+.+...+..+=-+...+...+++|++.|. ++--.-++..- ++.+ |..|+. -..+.+ .+.|.+.|.++.++
T Consensus 71 ~~~l~~~v~~ld~~~~l~~~l~~L~~~H~--~~gV~p~~f~~---~~~~ll~~l~~--g~~~t~e~~~AW~~~~~~va~~ 143 (152)
T 3pt8_A 71 CNGMSSFVDHLDDNDMLVVLIQKMAKLHN--NRGIRASDLRT---AYDILIHYMED--HNHMVGGAKDAWEVFVGFICKT 143 (152)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHHH--TTTCCHHHHHH---HHHHHHHHHHH--TTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHH--cCCCCHHHHHH---HHHHHHHHHHH--cCcCCHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHhh
Q 026807 85 METAVKS 91 (233)
Q Consensus 85 ~e~Avk~ 91 (233)
|....+.
T Consensus 144 l~~~y~e 150 (152)
T 3pt8_A 144 LGDYMKE 150 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
No 225
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=31.14 E-value=30 Score=26.69 Aligned_cols=20 Identities=10% Similarity=0.222 Sum_probs=12.5
Q ss_pred hhHHHHHHHHHHHhhCCCcH
Q 026807 3 QYDDALSAFQTALQYNPQSA 22 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~ 22 (233)
+|++|+..|+.||++.++..
T Consensus 130 ~~~~Ai~~~~~al~~~~~~~ 149 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCS
T ss_pred CHHHHHHHHHHHHHHhcccc
Confidence 56777777777776554433
No 226
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=31.00 E-value=1.5e+02 Score=21.39 Aligned_cols=16 Identities=25% Similarity=0.603 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHHHHhh
Q 026807 2 EQYDDALSAFQTALQY 17 (233)
Q Consensus 2 e~y~dAlaafq~Alq~ 17 (233)
.+|++|+..|+.|+++
T Consensus 29 g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 29 SRYQQALVCYQEGIDM 44 (93)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3689999999999875
No 227
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=30.99 E-value=1.3e+02 Score=22.30 Aligned_cols=63 Identities=8% Similarity=0.122 Sum_probs=34.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHh-HHHHHHHHHHhhcc--hhhhhHhHHHHHHHHHHHH
Q 026807 20 QSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQH-LDEFKSEMSEKYGA--EECWKHVFSFVVETMETAV 89 (233)
Q Consensus 20 qs~EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~-L~~lk~em~~~~G~--~e~~k~~fsF~ve~~e~Av 89 (233)
+-..+..-+++|++.|+. +.-.-++..- ++.+ |..|+.-+- +.. .+.|.+.|..+.++|-.++
T Consensus 82 ~~~~l~~~l~~L~~~H~~--~~V~p~~f~~---~~~~Ll~~l~~~lg--~t~e~~~AW~k~~~~va~~~~~~~ 147 (151)
T 2c0k_A 82 GDKKFDDVWKKLAQTHHE--KKVERRSYNE---LKDIIIEVVCSCVK--LNEKQVHAYHKFFDRAYDIAFAEM 147 (151)
T ss_dssp CCHHHHHHHHHHHHHHTT--SCCCHHHHHH---HHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh--CCCCHHHHHH---HHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHc
Confidence 344566666666666654 2222222211 2222 344433322 332 2679999999999998887
No 228
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=30.79 E-value=1.6e+02 Score=21.75 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=11.0
Q ss_pred hhhHHHHHHHHHHHhhC
Q 026807 2 EQYDDALSAFQTALQYN 18 (233)
Q Consensus 2 e~y~dAlaafq~Alq~n 18 (233)
.+|++|+..|+.|++.+
T Consensus 128 ~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 128 RDFKKAVEYFTKACDLN 144 (273)
T ss_dssp CCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHhcC
Confidence 35666666666666665
No 229
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=30.73 E-value=51 Score=24.75 Aligned_cols=16 Identities=31% Similarity=0.611 Sum_probs=11.6
Q ss_pred HHHHhHHHHHHHHHHhhcc
Q 026807 52 DMVQHLDEFKSEMSEKYGA 70 (233)
Q Consensus 52 d~ak~L~~lk~em~~~~G~ 70 (233)
|+|+ .+|++|-++||.
T Consensus 50 diA~---~IK~~fDkkyG~ 65 (102)
T 1yo3_A 50 DIAA---HIKKEFDRKYDP 65 (102)
T ss_dssp HHHH---HHHHHHHHHHCS
T ss_pred HHHH---HHHHHHhhhcCC
Confidence 4554 467888899995
No 230
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=30.64 E-value=27 Score=31.61 Aligned_cols=28 Identities=14% Similarity=0.063 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
++|++|++.|+.|++.+|++..+=.-.+
T Consensus 206 ~~~~eel~~~~~ai~~~P~~~saW~y~~ 233 (567)
T 1dce_A 206 NVLLKELELVQNAFFTDPNDQSAWFYHR 233 (567)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCccHHHHHH
Confidence 5799999999999999999987655433
No 231
>1a6m_A Myoglobin; heme protein, model compounds, oxygen storage, ligand binding geometry, conformational substates, oxygen transpor; HET: HEM; 1.00A {Physeter catodon} SCOP: a.1.1.2 PDB: 1a6k_A* 1a6n_A* 2jho_A* 1ufp_A* 2eb9_A* 2eb8_A* 2w6w_A* 2ekt_A* 105m_A* 104m_A* 1ajh_A* 1ajg_A* 1bvc_A* 1bvd_A* 1bz6_A* 1bzr_A* 1cq2_A* 1duk_A* 1ebc_A* 1hjt_A* ...
Probab=30.55 E-value=51 Score=24.67 Aligned_cols=19 Identities=0% Similarity=0.125 Sum_probs=15.7
Q ss_pred hhhhhHhHHHHHHHHHHHH
Q 026807 71 EECWKHVFSFVVETMETAV 89 (233)
Q Consensus 71 ~e~~k~~fsF~ve~~e~Av 89 (233)
.+.|.+.|..+.++|-.+.
T Consensus 128 ~~AW~k~~~~v~~~l~~~y 146 (151)
T 1a6m_A 128 QGAMNKALELFRKDIAAKY 146 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4679999999999888776
No 232
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.63 E-value=2.1e+02 Score=22.54 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=25.1
Q ss_pred hhhHHHHHHHHHHHhh------CCCcHHHHHHHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQY------NPQSAEVSRKIKRVSQLAKDKKRAQE 43 (233)
Q Consensus 2 e~y~dAlaafq~Alq~------npqs~EvsrKIkrlsqL~k~kkra~e 43 (233)
.+|++|+..++.++.. +|...++-..+-++-...++-.+|++
T Consensus 149 g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 196 (434)
T 4b4t_Q 149 KQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKA 196 (434)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHH
Confidence 4799999999998876 33334444444444444444455554
No 233
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=29.62 E-value=57 Score=29.77 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=27.8
Q ss_pred HHHhhhhhHHHHhHHHHHHHHHHh--------hcchhhhhHhH
Q 026807 44 VENIRSNVDMVQHLDEFKSEMSEK--------YGAEECWKHVF 78 (233)
Q Consensus 44 ven~rsnvd~ak~L~~lk~em~~~--------~G~~e~~k~~f 78 (233)
.+.+.+|+-.+..+++|+..+.++ +|+.||...|-
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (501)
T 1nj1_A 424 WERMESEIREAETLEEASRIVDEKRGIISFMWCGEEECGMDVE 466 (501)
T ss_dssp HHHHHTTEEECSSHHHHHHHHHHHCSEEEEEECCCHHHHHHHH
T ss_pred HHHHHhCEEEcCCHHHHHHHHhhCCCEEEEecCCCHHHHHHHH
Confidence 366778877788899999999874 69999976665
No 234
>3d1k_A Hemoglobin subunit alpha-1; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 2aa1_A* 1t1n_A* 1la6_A* 3nfe_A* 3ng6_A* 2h8f_A* 1pbx_A* 1s5x_A* 1s5y_A* 1hbh_A* 2h8d_A* 2peg_A* 3gkv_A* 3gqg_A* 1v4x_A* 1v4u_A* 1v4w_A*
Probab=29.61 E-value=1.2e+02 Score=22.23 Aligned_cols=15 Identities=20% Similarity=0.255 Sum_probs=8.0
Q ss_pred HHHHHHHHhhCCCcH
Q 026807 8 LSAFQTALQYNPQSA 22 (233)
Q Consensus 8 laafq~Alq~npqs~ 22 (233)
..+|...+..+|+..
T Consensus 26 ~~~~~rlF~~~P~~~ 40 (142)
T 3d1k_A 26 NDALSRMIVVYPQTK 40 (142)
T ss_dssp HHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHCccHH
Confidence 445566665555443
No 235
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=29.46 E-value=64 Score=28.40 Aligned_cols=51 Identities=18% Similarity=0.418 Sum_probs=31.3
Q ss_pred HHHhhhhhHHH-HhHHHHHH---HHHHhhcc----hhh-----hhHhHHHHHHHHHHHHhhhhc
Q 026807 44 VENIRSNVDMV-QHLDEFKS---EMSEKYGA----EEC-----WKHVFSFVVETMETAVKSWHE 94 (233)
Q Consensus 44 ven~rsnvd~a-k~L~~lk~---em~~~~G~----~e~-----~k~~fsF~ve~~e~Avk~whe 94 (233)
+.+|...++-| .+|+.++. -|..+|.+ .+. -.+-|.|+..-+..|+.+|.+
T Consensus 259 ~~~l~~~I~~Ai~al~~l~~~W~~m~~~~~~l~~~I~~~~~~i~~~~~~~i~~~L~~a~~~W~~ 322 (346)
T 2nrj_A 259 INEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHIENAAQKADQNKFKFLKPNLNAAKDSWKT 322 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTTTGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHhHHHH
Confidence 45555555444 33444443 34555444 332 345688899999999999987
No 236
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=29.16 E-value=1.3e+02 Score=23.36 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=22.1
Q ss_pred hhhhhHhHHHHHHHHHHHHhhhhccCCCCceEeeecC
Q 026807 71 EECWKHVFSFVVETMETAVKSWHETSKVDAKVYFLLD 107 (233)
Q Consensus 71 ~e~~k~~fsF~ve~~e~Avk~whe~~kvd~~V~FLld 107 (233)
+.-+..++.-|..+|..+| .+.-+||.---||-|
T Consensus 95 e~~l~~LL~~I~~iI~~~I---~~~i~v~tg~p~~~~ 128 (151)
T 2pih_A 95 QMEVNDLLQLVAHTISNQV---TNEIITSTGGDLLKG 128 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHTCCC----
T ss_pred HHHHHHHHHHHHHHHHHHh---hhcccCCCCCCcccc
Confidence 4456777888888888888 566677777778865
No 237
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=28.97 E-value=97 Score=23.81 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=21.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSRKIK 29 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~EvsrKIk 29 (233)
.+|++|+..|+.+++.+|...+....+.
T Consensus 89 ~~y~~A~~~~~~~l~~~~~~~~~~~~~~ 116 (293)
T 2qfc_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQ 116 (293)
T ss_dssp TCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChhHHHHHH
Confidence 5799999999999999988765544333
No 238
>1hnr_A H-NS; histone-like protein H1, DNA-binding protein; NMR {Escherichia coli} SCOP: a.155.1.1 PDB: 1hns_A
Probab=28.90 E-value=15 Score=24.81 Aligned_cols=8 Identities=50% Similarity=1.145 Sum_probs=7.3
Q ss_pred ccccCccc
Q 026807 165 VWRGQGLR 172 (233)
Q Consensus 165 VWkgqGsR 172 (233)
+|.|+|.+
T Consensus 18 TWtGrGr~ 25 (47)
T 1hnr_A 18 TWTGQGRT 25 (47)
T ss_dssp ECCTTSSC
T ss_pred cccCCCCC
Confidence 99999986
No 239
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=28.77 E-value=1.7e+02 Score=27.58 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhH--HHHhHHHHHHHHHHhhcchhhhhHhH
Q 026807 4 YDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVEN--IRSNVD--MVQHLDEFKSEMSEKYGAEECWKHVF 78 (233)
Q Consensus 4 y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkra~even--~rsnvd--~ak~L~~lk~em~~~~G~~e~~k~~f 78 (233)
++.|..+|+.||+..|.+.++-...=.+--...+-.+|..+-. +..+-+ -.+.|=..--++-.+||+.+...++.
T Consensus 486 ~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~ 564 (679)
T 4e6h_A 486 TKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLE 564 (679)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 6889999999999999998875322222211223334433222 111111 11122222234456689988655544
No 240
>1gcv_B Hemoglobin; oxygen storage/transport complex; HET: HEM; 2.00A {Mustelus griseus} SCOP: a.1.1.2 PDB: 1gcw_B*
Probab=28.76 E-value=1.6e+02 Score=21.90 Aligned_cols=16 Identities=13% Similarity=0.227 Sum_probs=9.7
Q ss_pred HHHHHHHHhhCCCcHH
Q 026807 8 LSAFQTALQYNPQSAE 23 (233)
Q Consensus 8 laafq~Alq~npqs~E 23 (233)
..+|...+..+|+...
T Consensus 25 ~~~~~rlF~~~P~~k~ 40 (136)
T 1gcv_B 25 TQALDRMFKVYPWTNR 40 (136)
T ss_dssp HHHHHHHHHHSGGGGG
T ss_pred HHHHHHHHHHChHHHH
Confidence 3566666666666544
No 241
>2l93_A DNA-binding protein H-NS; at HOOK; NMR {Salmonella typhimurium}
Probab=28.18 E-value=16 Score=25.69 Aligned_cols=9 Identities=44% Similarity=1.073 Sum_probs=7.7
Q ss_pred cccccCccc
Q 026807 164 QVWRGQGLR 172 (233)
Q Consensus 164 QVWkgqGsR 172 (233)
++|.|||.+
T Consensus 17 ~TWtGrGR~ 25 (55)
T 2l93_A 17 KTWTGQGRT 25 (55)
T ss_dssp EEECSCSSC
T ss_pred CcccCCCCC
Confidence 389999986
No 242
>3bom_A Hemoglobin subunit alpha-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_A*
Probab=28.10 E-value=1.2e+02 Score=22.45 Aligned_cols=15 Identities=0% Similarity=-0.042 Sum_probs=7.7
Q ss_pred hhhhHhHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETME 86 (233)
Q Consensus 72 e~~k~~fsF~ve~~e 86 (233)
+.|.+.|..+.++|-
T Consensus 125 ~AW~~~~~~va~~l~ 139 (143)
T 3bom_A 125 LSVDKFLQQLALALA 139 (143)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555555443
No 243
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=27.82 E-value=1.4e+02 Score=22.13 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=11.1
Q ss_pred HHHHHHHHHhhCCCcHHHH
Q 026807 7 ALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 7 Alaafq~Alq~npqs~Evs 25 (233)
+...|..-+..+|+....=
T Consensus 34 g~~~~~rlF~~~P~~k~~F 52 (150)
T 1sct_A 34 GLMLMSNLFTLRPDTKTYF 52 (150)
T ss_dssp HHHHHHHHHHHCGGGGGGG
T ss_pred HHHHHHHHHHHChhHHHHH
Confidence 4566666676666544433
No 244
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=27.52 E-value=87 Score=25.27 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=25.8
Q ss_pred ChhhHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDK 38 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~k 38 (233)
+..|++|+..-...|+..|.+..+ +.|.++++++
T Consensus 90 l~~Y~~Ar~y~d~lL~~eP~n~QA----~~Lk~~Ie~~ 123 (144)
T 1y8m_A 90 LGEYSMAKRYVDTLFEHERNNKQV----GALKSMVEDK 123 (144)
T ss_dssp TTCHHHHHHHHHHHHHTCCCCHHH----HHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhcCCCcHHH----HHHHHHHHHH
Confidence 468999999999999999998654 3455555443
No 245
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=27.02 E-value=37 Score=29.91 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHhhCCCcHHH
Q 026807 3 QYDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 3 ~y~dAlaafq~Alq~npqs~Ev 24 (233)
+.++||..+..||+.||.+..+
T Consensus 69 ~se~AL~lt~~~L~~nP~~yta 90 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTV 90 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHhCchhHHH
Confidence 3455666666666666655554
No 246
>2d9e_A Peregrin; four-helix bundle, transcription activator, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.46 E-value=1.9e+02 Score=21.42 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAK 36 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k 36 (233)
+|-.-.|.-|..||+..+.+.+--++|.+...
T Consensus 70 ~D~~li~~Na~~yN~~~s~~~~~A~~L~~~~~ 101 (121)
T 2d9e_A 70 EDFNLIVSNCLKYNAKDTIFYRAAVRLREQGG 101 (121)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 46667899999999999998887777765543
No 247
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=26.14 E-value=1.4e+02 Score=22.19 Aligned_cols=18 Identities=11% Similarity=0.207 Sum_probs=10.2
Q ss_pred HHHHHHHHHhhCCCcHHH
Q 026807 7 ALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 7 Alaafq~Alq~npqs~Ev 24 (233)
+...|...+..+|+...+
T Consensus 36 g~~~y~rlF~~~P~~k~~ 53 (152)
T 4hrt_B 36 GLMLMANLFKTSPSAKGK 53 (152)
T ss_dssp HHHHHHHHHHHCTHHHHH
T ss_pred HHHHHHHHHHHCHhHHHh
Confidence 455666666666554444
No 248
>1wmu_A Hemoglobin D alpha chain; hemoglobin D, reptilia, the aldabra giant tortoise, geochelone gigantea, oxygen storage/transport complex; HET: HEM; 1.65A {Dipsochelys dussumieri} SCOP: a.1.1.2 PDB: 1v75_A* 2z6n_A* 1hbr_A*
Probab=25.89 E-value=1.9e+02 Score=21.04 Aligned_cols=15 Identities=7% Similarity=0.222 Sum_probs=8.7
Q ss_pred hhhhHhHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETME 86 (233)
Q Consensus 72 e~~k~~fsF~ve~~e 86 (233)
+.|.+.|.++.++|-
T Consensus 123 ~AW~~~~~~v~~~l~ 137 (141)
T 1wmu_A 123 VAYDKFLAAVSAVLA 137 (141)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 456666666655553
No 249
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=25.48 E-value=28 Score=25.92 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=13.2
Q ss_pred hhhhHhHHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETAV 89 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~Av 89 (233)
+.|...|.++.++|-.+.
T Consensus 140 ~AW~~~~~~v~~~l~~~~ 157 (159)
T 1hlm_A 140 DAWAKTFAIVQGVLITKH 157 (159)
T ss_dssp HHHHHHHHHHGGGGTSTT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 668888888877776554
No 250
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=25.44 E-value=90 Score=27.10 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHHhhCC--CcHHHH
Q 026807 2 EQYDDALSAFQTALQYNP--QSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~np--qs~Evs 25 (233)
.+|++||..++..+..+| .+.|.-
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~ 139 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELL 139 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHH
Confidence 579999999999999997 666654
No 251
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=25.38 E-value=1.1e+02 Score=28.23 Aligned_cols=138 Identities=19% Similarity=0.283 Sum_probs=62.5
Q ss_pred ChhhHHHHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHHHHHHHHHHhhcchhhhhHhHH
Q 026807 1 MEQYDDALSAFQTALQYNPQS-AEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAEECWKHVFS 79 (233)
Q Consensus 1 me~y~dAlaafq~Alq~npqs-~EvsrKIkrlsqL~k~kkra~even~rsnvd~ak~L~~lk~em~~~~G~~e~~k~~fs 79 (233)
+++|++|+.+|+.|. ||.. .+|.---..+++ =++|+. ....+..|=+.+- +|.+-|-..+.+.+.++
T Consensus 161 Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~e----f~lA~~-----~~l~L~~~ad~l~-~lv~~Yek~G~~eEai~ 228 (449)
T 1b89_A 161 LGEYQAAVDGARKAN--STRTWKEVCFACVDGKE----FRLAQM-----CGLHIVVHADELE-ELINYYQDRGYFEELIT 228 (449)
T ss_dssp TTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTC----HHHHHH-----TTTTTTTCHHHHH-HHHHHHHHTTCHHHHHH
T ss_pred hccHHHHHHHHHHcC--CchhHHHHHHHHHHcCc----HHHHHH-----HHHHHHhCHhhHH-HHHHHHHHCCCHHHHHH
Confidence 468999999999991 2211 222222222221 223332 1112323323322 46677777777777775
Q ss_pred HHHHHHHHH---HhhhhccCCCCceEeeecCCCCccccccCceecccc---cccCCcchhhhHHHHHhhhhhhhhhhhhh
Q 026807 80 FVVETMETA---VKSWHETSKVDAKVYFLLDKEKTDTEKYAPIVNVDK---AFESPHTHGSCFQFLRQYADDSFSSAACL 153 (233)
Q Consensus 80 F~ve~~e~A---vk~whe~~kvd~~V~FLld~~kt~tekyap~Vnidk---AFeSP~th~~Cf~fLRqYAeesfs~Aac~ 153 (233)
++...|..- +--|-+-+-++++ |-+++=-.-.+-|-..+||.| |-+-+|.-.+=+--.-+| +-|..|+-.
T Consensus 229 lLe~aL~le~ah~~~ftel~il~~k--y~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~--~e~d~A~~t 304 (449)
T 1b89_A 229 MLEAALGLERAHMGMFTELAILYSK--FKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKY--EEYDNAIIT 304 (449)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHT--TCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHH
Confidence 554443210 1112221111111 000110111234557788888 566677776654444344 334455543
Q ss_pred c
Q 026807 154 V 154 (233)
Q Consensus 154 v 154 (233)
+
T Consensus 305 m 305 (449)
T 1b89_A 305 M 305 (449)
T ss_dssp H
T ss_pred H
Confidence 3
No 252
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=25.13 E-value=3.4e+02 Score=23.79 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhhCCCcHHH
Q 026807 4 YDDALSAFQTALQYNPQSAEV 24 (233)
Q Consensus 4 y~dAlaafq~Alq~npqs~Ev 24 (233)
++.|...|+.|++.-|.+.++
T Consensus 336 ~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 336 RATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp SHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHHHCCCCHHH
Confidence 677888888888888887765
No 253
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=25.08 E-value=2.2e+02 Score=21.49 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=17.8
Q ss_pred HhHHHHHHHHHHhhcchhhhhH
Q 026807 55 QHLDEFKSEMSEKYGAEECWKH 76 (233)
Q Consensus 55 k~L~~lk~em~~~~G~~e~~k~ 76 (233)
..|++++.||..+|+.-...+.
T Consensus 54 ~~le~lk~eL~~~~~el~~lq~ 75 (107)
T 2no2_A 54 EVLESLKQELATSQRELQVLQG 75 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999999988877655
No 254
>3iu5_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo0ID, PBRM1, BRG associated factor 180, structural genomics, SGC; 1.63A {Homo sapiens}
Probab=24.97 E-value=1.7e+02 Score=21.24 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKK 39 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kk 39 (233)
.|-.-.|.-|..||+.++++.+.-++|.++-..+-
T Consensus 74 ~D~~li~~Na~~yN~~~s~~~~~A~~L~~~f~~~~ 108 (116)
T 3iu5_A 74 ADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTR 108 (116)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 45667889999999999999988888887765543
No 255
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=24.96 E-value=71 Score=23.92 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=14.9
Q ss_pred hhhhHhHHHHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETMETAV 89 (233)
Q Consensus 72 e~~k~~fsF~ve~~e~Av 89 (233)
+.|.+.|..+.++|-...
T Consensus 129 ~AW~k~~~~va~~l~~~y 146 (153)
T 1lhs_A 129 AAMKKALELFRNDMASKY 146 (153)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 679999999998888665
No 256
>2r80_B Hemoglobin subunit beta; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3dhr_B* 3mju_B* 1faw_B* 3k8b_B* 2qmb_B* 3eok_B* 1a4f_B* 1c40_B* 1hv4_B* 2zfb_B* 3mjp_B* 1hbr_B* 3fs4_B* 3a59_B* 1wmu_B* 1v75_B* 2z6n_B* 3at5_B* 3at6_B*
Probab=24.69 E-value=1.8e+02 Score=21.36 Aligned_cols=15 Identities=13% Similarity=0.576 Sum_probs=10.7
Q ss_pred hhhhHhHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETME 86 (233)
Q Consensus 72 e~~k~~fsF~ve~~e 86 (233)
+.|.+.|.++.++|.
T Consensus 128 ~AW~~~~~~va~~l~ 142 (146)
T 2r80_B 128 AAWQKLVRVVAHALA 142 (146)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777777664
No 257
>1spg_A Hemoglobin; carbon monoxide, R-state, teleost FISH effect, oxygen transport; HET: HEM; 1.95A {Leiostomus xanthurus} SCOP: a.1.1.2
Probab=24.37 E-value=1.4e+02 Score=22.22 Aligned_cols=17 Identities=24% Similarity=0.163 Sum_probs=8.9
Q ss_pred HHHHHHHHHhhCCCcHH
Q 026807 7 ALSAFQTALQYNPQSAE 23 (233)
Q Consensus 7 Alaafq~Alq~npqs~E 23 (233)
+..+|...+..+|+...
T Consensus 26 g~~~~~rlF~~~P~~k~ 42 (144)
T 1spg_A 26 GAEALGRMLVSFPQTKI 42 (144)
T ss_dssp HHHHHHHHHHHCGGGGG
T ss_pred HHHHHHHHHHHChHHHH
Confidence 34555556655554443
No 258
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=24.26 E-value=11 Score=28.15 Aligned_cols=40 Identities=23% Similarity=0.518 Sum_probs=24.3
Q ss_pred ccceeeeeeecccccccccccCccccccc-------hhccchHHHhh
Q 026807 189 PLLRKLWFIPSSNEKGKTLCRDPEVLDIS-------AHEVFPRLFKE 228 (233)
Q Consensus 189 p~lRk~WFips~~Ekg~tlcr~pe~ldi~-------~hev~pr~fke 228 (233)
+.+.|||=|=.+.+-...+|=+|.---+- ..+|||+.||.
T Consensus 6 ~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh 52 (106)
T 1hks_A 6 AFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKH 52 (106)
T ss_dssp TTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSC
T ss_pred cHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCC
Confidence 56778887766655545554444322222 34899999974
No 259
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.02 E-value=16 Score=28.27 Aligned_cols=65 Identities=25% Similarity=0.447 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHh-HHHHHHHHHHhhcchhhhhHhHHHHHHHHHHHHhhhhccCCCCceEeee
Q 026807 29 KRVSQLAKDKKRAQEVENIRSNVDMVQH-LDEFKSEMSEKYGAEECWKHVFSFVVETMETAVKSWHETSKVDAKVYFL 105 (233)
Q Consensus 29 krlsqL~k~kkra~even~rsnvd~ak~-L~~lk~em~~~~G~~e~~k~~fsF~ve~~e~Avk~whe~~kvd~~V~FL 105 (233)
.||.+|++|-|...|- -| ||| +++|..||...|-++- ..+..-+.|-||.-+ ..+|.+-||-.||
T Consensus 29 erieklakdvkdelee------gd-aknmiekfrdemeqmykdap--navmeqlleeiekll---kkagslvprgsyl 94 (101)
T 2lse_A 29 ERIEKLAKDVKDELEE------GD-AKNMIEKFRDEMEQMYKDAP--NAVMEQLLEEIEKLL---KKAGSLVPRGSYL 94 (101)
Confidence 3556666666554431 12 334 8999999999998886 345555556666655 4567777776665
No 260
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=24.12 E-value=2.1e+02 Score=25.85 Aligned_cols=56 Identities=13% Similarity=0.246 Sum_probs=31.5
Q ss_pred hhCCCcHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhH-------HHHhHHHHHHHHHHhhcch
Q 026807 16 QYNPQSAEVSRKIKR-VSQLAKDKKRAQEVENIRSNVD-------MVQHLDEFKSEMSEKYGAE 71 (233)
Q Consensus 16 q~npqs~EvsrKIkr-lsqL~k~kkra~even~rsnvd-------~ak~L~~lk~em~~~~G~~ 71 (233)
+.+|...+...++|. +.++...=+++.++-.-+-.-+ |..++++|+++|.++||--
T Consensus 371 ~~~p~~~~~v~~Lk~~~~~~~~~l~~~L~lh~~li~~~~~~~h~~L~~~f~~l~~~le~~yg~~ 434 (436)
T 2yin_A 371 RDHPEDQDKLTHLKDLIAWQIPFLGAGIKIHEKRVSDNLRPFHDRMEECFKNLKMKVEKEYGVR 434 (436)
T ss_dssp HHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 345655544444433 2333344455655443222222 3466899999999999964
No 261
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=23.64 E-value=51 Score=28.60 Aligned_cols=25 Identities=16% Similarity=0.092 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVSR 26 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evsr 26 (233)
++|+++|..+..|+..+|++..+=.
T Consensus 207 ~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 207 NVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5799999999999999999998764
No 262
>1out_A Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_A*
Probab=23.64 E-value=1.4e+02 Score=22.18 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=8.5
Q ss_pred HHHHHHHHHhhCCCcH
Q 026807 7 ALSAFQTALQYNPQSA 22 (233)
Q Consensus 7 Alaafq~Alq~npqs~ 22 (233)
+..+|...+..+|+..
T Consensus 26 g~~~~~rlF~~~P~~k 41 (143)
T 1out_A 26 GAEALGRMLTAYPQTK 41 (143)
T ss_dssp HHHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHHCccHH
Confidence 3455666666555433
No 263
>2aa1_B Hemoglobin beta-C chain; ROOT effect, cooperativity, antarctic FISH, oxygen storage/transport complex; HET: HEM; 1.80A {Trematomus newnesi} SCOP: a.1.1.2 PDB: 1xq5_B* 3bj1_B* 3bj2_B* 3bj3_B*
Probab=23.37 E-value=1.6e+02 Score=21.99 Aligned_cols=31 Identities=10% Similarity=0.258 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhhcch--hhhhHhHHHHHHHHHH
Q 026807 57 LDEFKSEMSEKYGAE--ECWKHVFSFVVETMET 87 (233)
Q Consensus 57 L~~lk~em~~~~G~~--e~~k~~fsF~ve~~e~ 87 (233)
|..|+.-+-..+..+ +.|.+.|..+.++|.+
T Consensus 111 l~~l~~~lg~~~t~e~~~AW~k~~~~va~~l~~ 143 (146)
T 2aa1_B 111 TIVVAARFGSAFTGEVQAAFQKFMAVVVSSLGK 143 (146)
T ss_dssp HHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 444444443334332 6788888777777654
No 264
>1jeb_A Hemoglobin zeta chain; oxygen transport, oxygen storage/transport complex; HET: HEM; 2.10A {Homo sapiens} SCOP: a.1.1.2
Probab=23.17 E-value=1.6e+02 Score=21.52 Aligned_cols=15 Identities=20% Similarity=0.567 Sum_probs=8.2
Q ss_pred hhhhHhHHHHHHHHH
Q 026807 72 ECWKHVFSFVVETME 86 (233)
Q Consensus 72 e~~k~~fsF~ve~~e 86 (233)
+.|.+.|.++.++|-
T Consensus 124 ~AW~~~~~~v~~~l~ 138 (142)
T 1jeb_A 124 AAWDKFLSVVSSVLT 138 (142)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555555554
No 265
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=23.13 E-value=1.6e+02 Score=21.71 Aligned_cols=20 Identities=5% Similarity=0.247 Sum_probs=13.8
Q ss_pred HHHhhcchhhhhHhHHHHHHHHH
Q 026807 64 MSEKYGAEECWKHVFSFVVETME 86 (233)
Q Consensus 64 m~~~~G~~e~~k~~fsF~ve~~e 86 (233)
|++.+|+ |.+.|..+.++|.
T Consensus 127 l~~~lg~---W~k~~~~va~~l~ 146 (149)
T 2lhb_A 127 VAAGDAG---FEKLMSMICILLR 146 (149)
T ss_dssp HHTTCHH---HHHHHHHHHHHHH
T ss_pred HHHHcch---HHHHHHHHHHHHH
Confidence 3445665 8888888877764
No 266
>3mb4_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo-1D, PBRM1, BRG associated factor 180, structural genomics consortium, SGC; 1.66A {Homo sapiens} PDB: 3g0j_A 2yqd_A
Probab=22.99 E-value=1.3e+02 Score=22.32 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKR 40 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kkr 40 (233)
.|-.-.|.-|..||+..+.+.+--++|.++-.++-+
T Consensus 84 ~D~~li~~Na~~yN~~~s~i~~~A~~L~~~f~~~~~ 119 (124)
T 3mb4_A 84 EDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRR 119 (124)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456668999999999999998888888877765543
No 267
>1f1m_A OSPC, outer surface protein C; LYME disease, HB19, helical bundle, dimer, immune system; 1.80A {Borrelia burgdorferi} SCOP: a.24.12.1 PDB: 1ggq_A
Probab=22.93 E-value=90 Score=26.28 Aligned_cols=31 Identities=29% Similarity=0.522 Sum_probs=25.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 026807 19 PQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVD 52 (233)
Q Consensus 19 pqs~EvsrKIkrlsqL~k~kkra~even~rsnvd 52 (233)
|.=+|+|.||+.-+-.+- -.+|||.|-+-+|
T Consensus 3 pnL~~ISKKItdsnafv~---aVKEVetLv~SID 33 (164)
T 1f1m_A 3 PNLTEISKKITESNAVVL---AVKEVETLLTSID 33 (164)
T ss_dssp CCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CcHHHHHHHhccHHHHHH---HHHHHHHHHhhHH
Confidence 778999999999888876 5677998876544
No 268
>1out_B Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_B*
Probab=22.88 E-value=1.8e+02 Score=21.68 Aligned_cols=14 Identities=29% Similarity=0.700 Sum_probs=9.0
Q ss_pred hhhhHhHHHHHHHH
Q 026807 72 ECWKHVFSFVVETM 85 (233)
Q Consensus 72 e~~k~~fsF~ve~~ 85 (233)
+.|.+.|..+.++|
T Consensus 128 ~AW~k~~~~va~~l 141 (146)
T 1out_B 128 ATWQKFMKVVVAAM 141 (146)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55677776666655
No 269
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=22.65 E-value=1.2e+02 Score=22.53 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=10.4
Q ss_pred hhhhhHhHHHHHHHHH
Q 026807 71 EECWKHVFSFVVETME 86 (233)
Q Consensus 71 ~e~~k~~fsF~ve~~e 86 (233)
.+.|...|.++.++|-
T Consensus 139 ~~AW~~~~~~v~~~l~ 154 (158)
T 1hlb_A 139 RDAWAKAFSVVQAVLL 154 (158)
T ss_dssp HHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4567777777766553
No 270
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=22.41 E-value=47 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.193 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHHhhCCCcHHHH
Q 026807 2 EQYDDALSAFQTALQYNPQSAEVS 25 (233)
Q Consensus 2 e~y~dAlaafq~Alq~npqs~Evs 25 (233)
+..++||..|..|++.||.+..+=
T Consensus 43 ~~~eeal~~~~~~l~~nP~~~taW 66 (567)
T 1dce_A 43 ELDESVLELTSQILGANPDFATLW 66 (567)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHCchhHHHH
Confidence 346899999999999999998874
No 271
>3ljw_A Protein polybromo-1; alpha helix, alternative splicing, bromodomain, chromatin RE DNA-binding, nucleus, phosphoprotein, transcription; 1.50A {Homo sapiens} PDB: 2ktb_B* 3hmf_A
Probab=22.33 E-value=2e+02 Score=21.02 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKK 39 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~kk 39 (233)
.|-.-.|.-|..||+.++.+.+--++|.++-..+-
T Consensus 77 ~D~~li~~Na~~yN~~~s~~~~~A~~L~~~f~~~~ 111 (120)
T 3ljw_A 77 KDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKK 111 (120)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 45666899999999999999998888887765443
No 272
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=21.87 E-value=2e+02 Score=21.16 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=8.2
Q ss_pred HHHHHHHHHhhCCCc
Q 026807 7 ALSAFQTALQYNPQS 21 (233)
Q Consensus 7 Alaafq~Alq~npqs 21 (233)
+..+|...+..+|+.
T Consensus 26 g~~~~~rlF~~~P~~ 40 (143)
T 1xq5_A 26 GSDALSRMLAVYPQT 40 (143)
T ss_dssp HHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHChHH
Confidence 345566666666543
No 273
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=21.78 E-value=2.1e+02 Score=19.87 Aligned_cols=14 Identities=36% Similarity=0.750 Sum_probs=8.0
Q ss_pred hhHHHHHHHHHHHh
Q 026807 3 QYDDALSAFQTALQ 16 (233)
Q Consensus 3 ~y~dAlaafq~Alq 16 (233)
+|++|+..|+.|++
T Consensus 28 ~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 28 QYEEAYTAYYNGLD 41 (85)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 45666666555554
No 274
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=21.71 E-value=1.8e+02 Score=21.37 Aligned_cols=22 Identities=9% Similarity=0.202 Sum_probs=12.1
Q ss_pred HHHHHHHHHhhCCCcHHHHHHH
Q 026807 7 ALSAFQTALQYNPQSAEVSRKI 28 (233)
Q Consensus 7 Alaafq~Alq~npqs~EvsrKI 28 (233)
+...|..-+..+|+....=.+.
T Consensus 35 g~~~y~rlF~~~P~~k~~F~~f 56 (151)
T 1sct_B 35 GLMLMANLFKTSPSAKGKFARL 56 (151)
T ss_dssp HHHHHHHHHHHCHHHHHHTGGG
T ss_pred HHHHHHHHHHHCHHHHHHHHHh
Confidence 4556666666666555444433
No 275
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=21.32 E-value=60 Score=23.74 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=28.0
Q ss_pred hHHHHhHHHHHHHHHHhhcch--hhhhHhHHHHHHHHH
Q 026807 51 VDMVQHLDEFKSEMSEKYGAE--ECWKHVFSFVVETME 86 (233)
Q Consensus 51 vd~ak~L~~lk~em~~~~G~~--e~~k~~fsF~ve~~e 86 (233)
+|=.+.++.+-.+|+++|+.. ++..++..|+.+..+
T Consensus 52 ~DG~rtv~eIv~~L~~~y~~~~e~i~~DV~~FL~~L~~ 89 (95)
T 3g2b_A 52 YDGTQSLAQIAQTLAAEFDADASEIETDVIELTTTLHQ 89 (95)
T ss_dssp CCSSSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 334456888999999999965 788899999887654
No 276
>4e8u_A Putative uncharacterized protein T8P19.180; XS domain, RNA binding protein, RNA directed DNA methylation; 2.70A {Arabidopsis thaliana}
Probab=21.03 E-value=50 Score=27.46 Aligned_cols=35 Identities=29% Similarity=0.561 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHH--HHHhhhhhHHH-HhHHHHHH
Q 026807 28 IKRVSQLAKDKKRAQE--VENIRSNVDMV-QHLDEFKS 62 (233)
Q Consensus 28 IkrlsqL~k~kkra~e--ven~rsnvd~a-k~L~~lk~ 62 (233)
+|+|+++.++..|..+ |.||..-|++- ++|++|..
T Consensus 132 LKTv~~i~~E~~rk~~~lv~~L~~~ie~kn~~l~ele~ 169 (172)
T 4e8u_A 132 LKTIAELTEEEARKQELLVQNLRQLVEEKKKDMKEIEE 169 (172)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4778999988877655 88865556665 66887764
No 277
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=21.01 E-value=3.6e+02 Score=22.41 Aligned_cols=26 Identities=12% Similarity=0.344 Sum_probs=21.5
Q ss_pred cchhhhhHhHHHHHHHHHHHHhhhhc
Q 026807 69 GAEECWKHVFSFVVETMETAVKSWHE 94 (233)
Q Consensus 69 G~~e~~k~~fsF~ve~~e~Avk~whe 94 (233)
|..++.+.+.+++.+.|...+..|=.
T Consensus 140 g~~~~v~~Iv~~i~~yL~e~l~~WI~ 165 (179)
T 3qbr_A 140 GHSDAIQMLIKTTSQYSDEKLKNWIN 165 (179)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHhHHHHHH
Confidence 56678888889999999888888855
No 278
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=20.97 E-value=97 Score=28.86 Aligned_cols=54 Identities=15% Similarity=0.394 Sum_probs=33.9
Q ss_pred HHHHHHHHHHH-HHHHH-HHHHHHHHhhhhhHHHHhHHHHHHHHHHh-------hcchhhhhHhH
Q 026807 23 EVSRKIKRVSQ-LAKDK-KRAQEVENIRSNVDMVQHLDEFKSEMSEK-------YGAEECWKHVF 78 (233)
Q Consensus 23 EvsrKIkrlsq-L~k~k-kra~even~rsnvd~ak~L~~lk~em~~~-------~G~~e~~k~~f 78 (233)
++..+|+.+-. .+.+- +||+ +.+.+|+-.+..+++|+.-+.++ +|+.||...|=
T Consensus 403 el~~~l~~ll~~i~~~l~~~a~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~e~~ik 465 (519)
T 4hvc_A 403 EAETKLQAILEDIQVTLFTRAS--EDLKTHMVVANTMEDFQKILDSGKIVQIPFCGEIDCEDWIK 465 (519)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHH--HHHHHHEEECCSHHHHHHHHHTTCEEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHhCEEEcCCHHHHHHHHhcCCEEEEeccCCHHHHHHHH
Confidence 45555554432 22221 3444 66678877788899999887543 69999976653
No 279
>1eca_A Erythrocruorin (AQUO Met); oxygen transport; HET: HEM; 1.40A {Chironomus thummi thummi} SCOP: a.1.1.2 PDB: 1ecd_A* 1ecn_A* 1eco_A*
Probab=20.75 E-value=2.5e+02 Score=20.64 Aligned_cols=18 Identities=11% Similarity=0.283 Sum_probs=11.8
Q ss_pred hhhhhHhHHHHHHHHHHH
Q 026807 71 EECWKHVFSFVVETMETA 88 (233)
Q Consensus 71 ~e~~k~~fsF~ve~~e~A 88 (233)
.+.|++.|..+..+|-.+
T Consensus 118 ~~AW~k~~~~v~~~l~~~ 135 (136)
T 1eca_A 118 EAAWGATLDTFFGMIFSK 135 (136)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 456777777777666554
No 280
>2l92_A Histone family protein nucleoid-structuring prote; H-NS, at HOOK, DNA binding protein; NMR {Burkholderia vietnamiensis}
Probab=20.57 E-value=28 Score=24.28 Aligned_cols=20 Identities=25% Similarity=0.923 Sum_probs=13.0
Q ss_pred cccccCccc-ccccCCC-cceeE
Q 026807 164 QVWRGQGLR-KWRHSQQ-DGFFV 184 (233)
Q Consensus 164 QVWkgqGsR-kWk~~q~-dGfFV 184 (233)
++|.|+|.+ +|- +++ +-|.|
T Consensus 14 ~TWsGRGR~P~Wi-Gk~~e~FlI 35 (50)
T 2l92_A 14 KTWSGRGRQPAWL-GNDPAAFLI 35 (50)
T ss_dssp CEECSCSSCCSTT-SSCGGGSBC
T ss_pred CeecCCCCCCccc-CCcHHHhcc
Confidence 699999987 565 433 33444
No 281
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=20.51 E-value=2e+02 Score=20.56 Aligned_cols=16 Identities=13% Similarity=0.459 Sum_probs=13.5
Q ss_pred hhhHHHHHHHHHHHhh
Q 026807 2 EQYDDALSAFQTALQY 17 (233)
Q Consensus 2 e~y~dAlaafq~Alq~ 17 (233)
.+|++|+..|+.|+++
T Consensus 33 g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 33 GNAEEAITNYKKAIEV 48 (83)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 3799999999999875
No 282
>2r3z_A CXCL10, small-inducible cytokine B10; IP-10/CXCL10, chemokine, chemotaxis, inflammatory response, attractant; 2.50A {Mus musculus}
Probab=20.46 E-value=1e+02 Score=21.06 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=22.4
Q ss_pred cccCCCcceeEEeccccceeeeeeecccccccccccCccc
Q 026807 174 WRHSQQDGFFVQFESPLLRKLWFIPSSNEKGKTLCRDPEV 213 (233)
Q Consensus 174 Wk~~q~dGfFVQ~Esp~lRk~WFips~~Ekg~tlcr~pe~ 213 (233)
-+...-.++.+|.-+|.=.+.=.|-.+..+|+.+|-||+.
T Consensus 19 Ip~~~I~~~~~~~~~~~C~~~~VIf~tk~~g~~vC~dP~~ 58 (68)
T 2r3z_A 19 VRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPES 58 (68)
T ss_dssp CCSSSCCEEEEECCCSSSSSCEEEEECTTTSCEEEECTTC
T ss_pred CChhHEEEEEEEeCCCCCCCCEEEEEEccCCCEEccCCch
Confidence 3334455666665454333322332233389999999985
No 283
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=20.40 E-value=1.3e+02 Score=23.21 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=27.4
Q ss_pred ChhhHHHHHHHHHHH-hhCCCcHHHHHHHHHHHHHHHHHH
Q 026807 1 MEQYDDALSAFQTAL-QYNPQSAEVSRKIKRVSQLAKDKK 39 (233)
Q Consensus 1 me~y~dAlaafq~Al-q~npqs~EvsrKIkrlsqL~k~kk 39 (233)
|+.-+|+++.|...| +++..|. .+|..||.++.+-.
T Consensus 2 ~~~~~~~~~~f~~~L~~L~~nSk---~~I~~LT~~a~~~~ 38 (144)
T 1sz9_A 2 DHDTEVIVKDFNSILEELTFNSR---PIITTLTKLAEENI 38 (144)
T ss_dssp CHHHHHHHHHHHHHHTTCSSCCH---HHHHHHHHHHHHTG
T ss_pred cccHHHHHHHHHHHHHHhccccH---hHHHHHHHHHHHHH
Confidence 366889999999999 5665443 36999999988743
No 284
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=20.37 E-value=1.6e+02 Score=25.70 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHHH
Q 026807 2 EQYDDALSAFQTALQY-----NPQSAEVSRKIKRVSQLAKDKKRAQE 43 (233)
Q Consensus 2 e~y~dAlaafq~Alq~-----npqs~EvsrKIkrlsqL~k~kkra~e 43 (233)
-+|++|+..|+.||+. -|.+..+++-...|..+...+-+-.|
T Consensus 301 g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~e 347 (429)
T 3qwp_A 301 WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEE 347 (429)
T ss_dssp TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHH
T ss_pred ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHH
Confidence 3689999999999975 38888898888888887776655444
No 285
>2lev_A LER; transcription regulator-DNA complex, arginine-minor-groove recognition; HET: DNA; NMR {Escherichia coli}
Probab=20.37 E-value=28 Score=24.62 Aligned_cols=13 Identities=38% Similarity=1.045 Sum_probs=9.9
Q ss_pred ccccccCccc-ccc
Q 026807 163 PQVWRGQGLR-KWR 175 (233)
Q Consensus 163 PQVWkgqGsR-kWk 175 (233)
-++|.|+|.+ +|-
T Consensus 23 g~TWtGrGR~P~Wi 36 (57)
T 2lev_A 23 GQTWSGVGRQPRWL 36 (57)
T ss_dssp CCEECSSSCCCHHH
T ss_pred CCeeCCCCCCCHHH
Confidence 3699999986 354
No 286
>3p1f_A CREB-binding protein; structural genomics consortium, SGC, CBP, crebbp, CREB bindi protein isoform A, KAT3A, RSTS, RST, bromodomain, transcrip; HET: 3PF; 1.63A {Homo sapiens} SCOP: a.29.2.1 PDB: 3dwy_A 3p1d_A 3p1c_A 3p1e_A* 3svh_A* 4a9k_A* 1jsp_B* 2d82_A* 2l84_A* 2l85_A* 2rny_A* 3i3j_A
Probab=20.20 E-value=1.7e+02 Score=21.26 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 026807 5 DDALSAFQTALQYNPQSAEVSRKIKRVSQLAKD 37 (233)
Q Consensus 5 ~dAlaafq~Alq~npqs~EvsrKIkrlsqL~k~ 37 (233)
.|-.-.|.-|..||+.++++.+--++|.++-.+
T Consensus 77 ~D~~li~~Na~~yN~~~s~i~~~A~~L~~~f~~ 109 (119)
T 3p1f_A 77 DDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQ 109 (119)
T ss_dssp HHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 456668999999999999998877777666543
No 287
>1v4x_B Hemoglobin beta chain; oxygen transport, heme, respiratory protein, erythrocyte, ROOT effect, SWIM bladder, oxygen storage/transport complex; HET: HEM; 1.60A {Thunnus thynnus} SCOP: a.1.1.2 PDB: 1v4u_B* 1v4w_B*
Probab=20.19 E-value=1.7e+02 Score=21.70 Aligned_cols=31 Identities=6% Similarity=0.213 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhcc--hhhhhHhHHHHHHHHHH
Q 026807 57 LDEFKSEMSEKYGA--EECWKHVFSFVVETMET 87 (233)
Q Consensus 57 L~~lk~em~~~~G~--~e~~k~~fsF~ve~~e~ 87 (233)
|..|+.-+-..+.. .+.|.+.|..+.++|.+
T Consensus 111 l~~l~~~lg~~~t~e~~~AW~k~~~~va~~l~~ 143 (146)
T 1v4x_B 111 TVVIAANLGDAFTVETQCAFQKFLAVVVFALGR 143 (146)
T ss_dssp HHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 34444433333333 26788888877777754
No 288
>1g5z_A Outer surface protein C; alpha helix protein, immune system; 2.51A {Borrelia burgdorferi} SCOP: a.24.12.1
Probab=20.13 E-value=92 Score=26.21 Aligned_cols=31 Identities=29% Similarity=0.518 Sum_probs=24.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 026807 19 PQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVD 52 (233)
Q Consensus 19 pqs~EvsrKIkrlsqL~k~kkra~even~rsnvd 52 (233)
|.=+|+|.||+.-+-.+- -.+|||.|-+-+|
T Consensus 1 pnLt~ISKKItdsnafvl---aVKEVetLv~SID 31 (164)
T 1g5z_A 1 PNLTEISKKITESNAVVL---AVKEVETLLASID 31 (164)
T ss_dssp CGGGTHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CcHHHHhHHhccHHHHHH---HHHHHHHHHhhHH
Confidence 667899999999888776 5677888776544
Done!